BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3251
(959 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 1574 bits (4075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 756/966 (78%), Positives = 835/966 (86%), Gaps = 65/966 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ---- 56
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQASQQT 60
Query: 57 --IQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAY 112
+Q+NG +L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ +
Sbjct: 61 QPVQINGTVGTSALDLKISGAAQSLAELQFEEEEEEA--YYNRDLPDHACKYCGIHEASC 118
Query: 113 VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFV 172
V+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGET+LECY+C VRN+FV
Sbjct: 119 VVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETILECYSCAVRNVFV 178
Query: 173 LGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQR 232
LGFIPAKADSVVVLLCR PCAAQ+SLKDMNWDQEQWKPLI DRSFLSWLVK+P+EQEQ R
Sbjct: 179 LGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLSWLVKIPSEQEQLR 238
Query: 233 GRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLE 292
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 239 ARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ---------------------- 276
Query: 293 ADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDK 352
V +R++ DGYQYQNIFGPLVKLEADYDK
Sbjct: 277 ---------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDK 303
Query: 353 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLG 412
RLKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+G
Sbjct: 304 RLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIG 363
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVS 472
HVIKIPDN+G+EVG+ELK+++GAPTE T+ F VDFIWKSTSFDRMQLALRKFAVDD SVS
Sbjct: 364 HVIKIPDNYGEEVGIELKNNSGAPTECTSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 423
Query: 473 AYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 532
AYIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK
Sbjct: 424 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 483
Query: 533 TVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSF 592
TVTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSF
Sbjct: 484 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 543
Query: 593 LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
LALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCV
Sbjct: 544 LALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCV 603
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARA
Sbjct: 604 GAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARA 663
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GLSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFP
Sbjct: 664 GLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFP 723
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKITTRF+RCG+KPEQIGVITPYEG
Sbjct: 724 WPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEG 783
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QRA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRR
Sbjct: 784 QRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRR 843
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
LNVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 844 LNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKK 903
Query: 953 YFKKNN 958
N
Sbjct: 904 LVNAAN 909
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 1574 bits (4075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 756/966 (78%), Positives = 835/966 (86%), Gaps = 65/966 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ---- 56
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQASQQT 60
Query: 57 --IQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAY 112
+Q+NG +L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ +
Sbjct: 61 QPVQINGTVGTSALDLKISGAAQSLAELQFEEEEEEA--YYNRDLPDHACKYCGIHEASC 118
Query: 113 VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFV 172
V+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGET+LECY+C VRN+FV
Sbjct: 119 VVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETILECYSCAVRNVFV 178
Query: 173 LGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQR 232
LGFIPAKADSVVVLLCR PCAAQ+SLKDMNWDQEQWKPLI DRSFLSWLVK+P+EQEQ R
Sbjct: 179 LGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLSWLVKIPSEQEQLR 238
Query: 233 GRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLE 292
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 239 ARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ---------------------- 276
Query: 293 ADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDK 352
V +R++ DGYQYQNIFGPLVKLEADYDK
Sbjct: 277 ---------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDK 303
Query: 353 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLG 412
RLKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+G
Sbjct: 304 RLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIG 363
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVS 472
HVIKIPDN+G+EVG+ELK+++GAPTE T+ F VDFIWKSTSFDRMQLALRKFAVDD SVS
Sbjct: 364 HVIKIPDNYGEEVGIELKNNSGAPTECTSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 423
Query: 473 AYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 532
AYIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK
Sbjct: 424 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 483
Query: 533 TVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSF 592
TVTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSF
Sbjct: 484 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 543
Query: 593 LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
LALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCV
Sbjct: 544 LALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCV 603
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARA
Sbjct: 604 GAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARA 663
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GLSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFP
Sbjct: 664 GLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFP 723
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKITTRF+RCG+KPEQIGVITPYEG
Sbjct: 724 WPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEG 783
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QRA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRR
Sbjct: 784 QRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRR 843
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
LNVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 844 LNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKK 903
Query: 953 YFKKNN 958
N
Sbjct: 904 LVNAAN 909
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 1570 bits (4064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 757/967 (78%), Positives = 835/967 (86%), Gaps = 68/967 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ---- 56
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDTAQSQPSQ 60
Query: 57 -IQVNGKQNLDNSNLNL----VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPA 111
+QVNG NS+L+L +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ +
Sbjct: 61 PVQVNGTSG--NSSLDLKISGAAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEAS 116
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+MCNIC+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+F
Sbjct: 117 CVVMCNICRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVF 176
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
VLGFIPAKADSVVVLLCR PCAAQ+SLKDMNWDQEQWKPLI DRSFL+WLVK+P+EQEQ
Sbjct: 177 VLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLAWLVKIPSEQEQL 236
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKL 291
R RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 237 RARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ--------------------- 275
Query: 292 EADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYD 351
V +R++ DGYQYQNIFGPLVKLEADYD
Sbjct: 276 ----------------VLLRYE------------------DGYQYQNIFGPLVKLEADYD 301
Query: 352 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGL 411
KRLKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+
Sbjct: 302 KRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGI 361
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSV 471
GHVIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SV
Sbjct: 362 GHVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSV 421
Query: 472 SAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTG 531
S YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTG
Sbjct: 422 SGYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTG 481
Query: 532 KTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
KTVTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVS
Sbjct: 482 KTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVS 541
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
FLALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTC
Sbjct: 542 FLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTC 601
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
VGAGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAAR
Sbjct: 602 VGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAR 661
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
AGLSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDF
Sbjct: 662 AGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF 721
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
PWP PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYE
Sbjct: 722 PWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYE 781
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
GQRA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPR
Sbjct: 782 GQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPR 841
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RLNVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK
Sbjct: 842 RLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPK 901
Query: 952 QYFKKNN 958
+ N
Sbjct: 902 KLVNAAN 908
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus terrestris]
Length = 1119
Score = 1568 bits (4059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/965 (78%), Positives = 834/965 (86%), Gaps = 64/965 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSV----NQ 56
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+ NQ
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQSQPNQ 60
Query: 57 -IQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
+QVNG + L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V
Sbjct: 61 PVQVNGTSGSSSLELKISGAAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEASCV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+FVL
Sbjct: 119 VMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCAAQ+SLKDMNWDQEQWKPLI DRSFL+WLVK+P+EQEQ R
Sbjct: 179 GFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLAWLVKIPSEQEQLRA 238
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 239 RQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ----------------------- 275
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
V +R++ DGYQYQNIFGPLVKLEADYDKR
Sbjct: 276 --------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKR 303
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
LKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+GH
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGH 363
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SVS
Sbjct: 364 VIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSG 423
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 424 YIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKT 483
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFL
Sbjct: 484 VTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFL 543
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCVG
Sbjct: 544 ALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVG 603
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 604 AGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 663
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFPW
Sbjct: 664 LSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPW 723
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYEGQ
Sbjct: 724 PAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYEGQ 783
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRL
Sbjct: 784 RAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRL 843
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 844 NVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKL 903
Query: 954 FKKNN 958
N
Sbjct: 904 VNAAN 908
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 1568 bits (4059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/965 (78%), Positives = 835/965 (86%), Gaps = 64/965 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSV----NQ 56
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+ NQ
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQSQPNQ 60
Query: 57 -IQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
+QVNG + +L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V
Sbjct: 61 PVQVNGTSGSSSLDLKISGAAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEASCV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+FVL
Sbjct: 119 VMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCAAQ+SLKDMNWDQEQWKPLI DRSFL+WLVK+P+EQEQ R
Sbjct: 179 GFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLAWLVKIPSEQEQLRA 238
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 239 RQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ----------------------- 275
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
V +R++ DGYQYQNIFGPLVKLEADYDKR
Sbjct: 276 --------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKR 303
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
LKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+GH
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGH 363
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SVS
Sbjct: 364 VIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSG 423
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 424 YIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKT 483
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFL
Sbjct: 484 VTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFL 543
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCVG
Sbjct: 544 ALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVG 603
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 604 AGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 663
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFPW
Sbjct: 664 LSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPW 723
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYEGQ
Sbjct: 724 PAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYEGQ 783
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRL
Sbjct: 784 RAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRL 843
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 844 NVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKL 903
Query: 954 FKKNN 958
N
Sbjct: 904 VNAAN 908
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus impatiens]
Length = 1119
Score = 1567 bits (4058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/965 (78%), Positives = 834/965 (86%), Gaps = 64/965 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSV----NQ 56
MSVDAYGPSSQTLTFLDTEETDLIG DTQGSEFDFTDFTLPS SQTQASQ D+ NQ
Sbjct: 1 MSVDAYGPSSQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQSQPNQ 60
Query: 57 -IQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
+QVNG + L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V
Sbjct: 61 PVQVNGTSGSSSLELKISGAAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEASCV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+FVL
Sbjct: 119 VMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCAAQ+SLKDMNWD EQWKPLI DRSFL+WLVK+P+EQEQ R
Sbjct: 179 GFIPAKADSVVVLLCRQPCAAQSSLKDMNWDHEQWKPLIEDRSFLAWLVKIPSEQEQLRA 238
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 239 RQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ----------------------- 275
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
V +R++ DGYQYQNIFGPLVKLEADYDKR
Sbjct: 276 --------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKR 303
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
LKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+GH
Sbjct: 304 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGH 363
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SVS
Sbjct: 364 VIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSG 423
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 424 YIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKT 483
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFL
Sbjct: 484 VTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFL 543
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCVG
Sbjct: 544 ALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVG 603
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 604 AGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 663
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFPW
Sbjct: 664 LSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPW 723
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYEGQ
Sbjct: 724 PAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYEGQ 783
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRL
Sbjct: 784 RAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRL 843
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 844 NVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKL 903
Query: 954 FKKNN 958
N
Sbjct: 904 VNAAN 908
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus impatiens]
Length = 1108
Score = 1563 bits (4048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/958 (78%), Positives = 829/958 (86%), Gaps = 61/958 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSVDAYGPSSQTLTFLDTEETDLIG DTQGSEFDFTDFTLPS SQTQASQ D+ Q Q N
Sbjct: 1 MSVDAYGPSSQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQASQHDAA-QSQPN 59
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICK 120
L S +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V+MCN+C+
Sbjct: 60 QPVQLKISG---AAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEASCVVMCNVCR 114
Query: 121 KWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKA 180
KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+FVLGFIPAKA
Sbjct: 115 KWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVLGFIPAKA 174
Query: 181 DSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQ 240
DSVVVLLCR PCAAQ+SLKDMNWD EQWKPLI DRSFL+WLVK+P+EQEQ R RQ+++ Q
Sbjct: 175 DSVVVLLCRQPCAAQSSLKDMNWDHEQWKPLIEDRSFLAWLVKIPSEQEQLRARQISAQQ 234
Query: 241 IAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLK 300
I KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 235 INKLEELWRDNVDATFQDLEKPGVDEEPQQ------------------------------ 264
Query: 301 ESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQ 360
V +R++ DGYQYQNIFGPLVKLEADYDKRLKESQTQ
Sbjct: 265 -------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKRLKESQTQ 299
Query: 361 ENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDN 420
EN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+GHVIKIPDN
Sbjct: 300 ENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDN 359
Query: 421 FGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLL 480
+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SVS YIYHRLL
Sbjct: 360 YGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLL 419
Query: 481 GHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV 540
GH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV
Sbjct: 420 GHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKTVTSATIV 479
Query: 541 YQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR 600
YQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFLALHNQI+
Sbjct: 480 YQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 539
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCVGAGDPRL
Sbjct: 540 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLH 599
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE
Sbjct: 600 RLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 659
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
RLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFPWP PDKPM
Sbjct: 660 RLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPM 719
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYEGQRA+LVQ+
Sbjct: 720 FFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQY 779
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRLNVALTRA
Sbjct: 780 MQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRA 839
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
KYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+ N
Sbjct: 840 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAAN 897
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus terrestris]
Length = 1108
Score = 1563 bits (4048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 753/958 (78%), Positives = 829/958 (86%), Gaps = 61/958 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+ Q Q N
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDAA-QSQPN 59
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICK 120
L S +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V+MCN+C+
Sbjct: 60 QPVQLKISG---AAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEASCVVMCNVCR 114
Query: 121 KWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKA 180
KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+FVLGFIPAKA
Sbjct: 115 KWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVLGFIPAKA 174
Query: 181 DSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQ 240
DSVVVLLCR PCAAQ+SLKDMNWDQEQWKPLI DRSFL+WLVK+P+EQEQ R RQ+++ Q
Sbjct: 175 DSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLAWLVKIPSEQEQLRARQISAQQ 234
Query: 241 IAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLK 300
I KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 235 INKLEELWRDNVDATFQDLEKPGVDEEPQQ------------------------------ 264
Query: 301 ESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQ 360
V +R++ DGYQYQNIFGPLVKLEADYDKRLKESQTQ
Sbjct: 265 -------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKRLKESQTQ 299
Query: 361 ENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDN 420
EN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+GHVIKIPDN
Sbjct: 300 ENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGHVIKIPDN 359
Query: 421 FGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLL 480
+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SVS YIYHRLL
Sbjct: 360 YGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLL 419
Query: 481 GHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV 540
GH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIV
Sbjct: 420 GHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKTVTSATIV 479
Query: 541 YQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR 600
YQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFLALHNQI+
Sbjct: 480 YQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIK 539
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCVGAGDPRL
Sbjct: 540 NMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLH 599
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE
Sbjct: 600 RLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 659
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
RLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFPWP PDKPM
Sbjct: 660 RLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPWPAPDKPM 719
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYEGQRA+LVQ+
Sbjct: 720 FFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQY 779
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRLNVALTRA
Sbjct: 780 MQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTRA 839
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
KYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+ N
Sbjct: 840 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKLVNAAN 897
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 1534 bits (3971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/966 (76%), Positives = 822/966 (85%), Gaps = 78/966 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ---- 56
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQASQQT 60
Query: 57 --IQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAY 112
+Q+NG +L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ +
Sbjct: 61 QPVQINGTVGTSALDLKISGAAQSLAELQFEEEEEEA--YYNRDLPDHACKYCGIHEASC 118
Query: 113 VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFV 172
V+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGET+LECY+C VRN+FV
Sbjct: 119 VVMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETILECYSCAVRNVFV 178
Query: 173 LGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQR 232
LGFIPAKADSVVVLLCR PCAAQ+SLKDMN FLSWLVK+P+EQEQ R
Sbjct: 179 LGFIPAKADSVVVLLCRQPCAAQSSLKDMN-------------CFLSWLVKIPSEQEQLR 225
Query: 233 GRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLE 292
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 226 ARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ---------------------- 263
Query: 293 ADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDK 352
V +R++ DGYQYQNIFGPLVKLEADYDK
Sbjct: 264 ---------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDK 290
Query: 353 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLG 412
RLKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+G
Sbjct: 291 RLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIG 350
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVS 472
HVIKIPDN+G+EVG+ELK+++GAPTE T+ F VDFIWKSTSFDRMQLALRKFAVDD SVS
Sbjct: 351 HVIKIPDNYGEEVGIELKNNSGAPTECTSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVS 410
Query: 473 AYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 532
AYIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK
Sbjct: 411 AYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 470
Query: 533 TVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSF 592
TVTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSF
Sbjct: 471 TVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSF 530
Query: 593 LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
LALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCV
Sbjct: 531 LALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCV 590
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARA
Sbjct: 591 GAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARA 650
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GLSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFP
Sbjct: 651 GLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFP 710
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKITTRF+RCG+KPEQIGVITPYEG
Sbjct: 711 WPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKPEQIGVITPYEG 770
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QRA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRR
Sbjct: 771 QRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRR 830
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
LNVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 831 LNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKK 890
Query: 953 YFKKNN 958
N
Sbjct: 891 LVNAAN 896
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus impatiens]
Length = 1106
Score = 1531 bits (3964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 743/965 (76%), Positives = 822/965 (85%), Gaps = 77/965 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSV----NQ 56
MSVDAYGPSSQTLTFLDTEETDLIG DTQGSEFDFTDFTLPS SQTQASQ D+ NQ
Sbjct: 1 MSVDAYGPSSQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQSQPNQ 60
Query: 57 -IQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
+QVNG + L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V
Sbjct: 61 PVQVNGTSGSSSLELKISGAAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEASCV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+FVL
Sbjct: 119 VMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCAAQ+SLKDMN FL+WLVK+P+EQEQ R
Sbjct: 179 GFIPAKADSVVVLLCRQPCAAQSSLKDMN-------------CFLAWLVKIPSEQEQLRA 225
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 226 RQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ----------------------- 262
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
V +R++ DGYQYQNIFGPLVKLEADYDKR
Sbjct: 263 --------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKR 290
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
LKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+GH
Sbjct: 291 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGH 350
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SVS
Sbjct: 351 VIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSG 410
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 411 YIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKT 470
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFL
Sbjct: 471 VTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFL 530
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCVG
Sbjct: 531 ALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVG 590
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 591 AGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 650
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFPW
Sbjct: 651 LSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPW 710
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYEGQ
Sbjct: 711 PAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYEGQ 770
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRL
Sbjct: 771 RAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRL 830
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 831 NVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKL 890
Query: 954 FKKNN 958
N
Sbjct: 891 VNAAN 895
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 1530 bits (3962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 744/967 (76%), Positives = 822/967 (85%), Gaps = 81/967 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ---- 56
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDTAQSQPSQ 60
Query: 57 -IQVNGKQNLDNSNLNL----VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPA 111
+QVNG NS+L+L +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ +
Sbjct: 61 PVQVNGTSG--NSSLDLKISGAAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEAS 116
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+MCNIC+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+F
Sbjct: 117 CVVMCNICRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVF 176
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
VLGFIPAKADSVVVLLCR PCAAQ+SLKDMN FL+WLVK+P+EQEQ
Sbjct: 177 VLGFIPAKADSVVVLLCRQPCAAQSSLKDMN-------------CFLAWLVKIPSEQEQL 223
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKL 291
R RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 224 RARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ--------------------- 262
Query: 292 EADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYD 351
V +R++ DGYQYQNIFGPLVKLEADYD
Sbjct: 263 ----------------VLLRYE------------------DGYQYQNIFGPLVKLEADYD 288
Query: 352 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGL 411
KRLKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+
Sbjct: 289 KRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGI 348
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSV 471
GHVIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SV
Sbjct: 349 GHVIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSV 408
Query: 472 SAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTG 531
S YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTG
Sbjct: 409 SGYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTG 468
Query: 532 KTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
KTVTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVS
Sbjct: 469 KTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVS 528
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
FLALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTC
Sbjct: 529 FLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTC 588
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
VGAGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAAR
Sbjct: 589 VGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAR 648
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
AGLSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDF
Sbjct: 649 AGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF 708
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
PWP PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYE
Sbjct: 709 PWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYE 768
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
GQRA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPR
Sbjct: 769 GQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPR 828
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RLNVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK
Sbjct: 829 RLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPK 888
Query: 952 QYFKKNN 958
+ N
Sbjct: 889 KLVNAAN 895
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus terrestris]
Length = 1106
Score = 1529 bits (3959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 742/965 (76%), Positives = 821/965 (85%), Gaps = 77/965 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSV----NQ 56
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D+ NQ
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDAAQSQPNQ 60
Query: 57 -IQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
+QVNG + L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V
Sbjct: 61 PVQVNGTSGSSSLELKISGAAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEASCV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C VRN+FVL
Sbjct: 119 VMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCAVRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCAAQ+SLKDMN FL+WLVK+P+EQEQ R
Sbjct: 179 GFIPAKADSVVVLLCRQPCAAQSSLKDMN-------------CFLAWLVKIPSEQEQLRA 225
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 226 RQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ----------------------- 262
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
V +R++ DGYQYQNIFGPLVKLEADYDKR
Sbjct: 263 --------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKR 290
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
LKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+LM GDEL+LRY + K WSG+GH
Sbjct: 291 LKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGH 350
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQLALRKFAVDD SVS
Sbjct: 351 VIKIPDNYGEEVGIELKNNSGAPTECVSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSG 410
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 411 YIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKT 470
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFL
Sbjct: 471 VTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFL 530
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCVG
Sbjct: 531 ALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVG 590
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 591 AGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 650
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFPW
Sbjct: 651 LSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPW 710
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKI TRF+RCG+KPEQIGVITPYEGQ
Sbjct: 711 PAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRCGVKPEQIGVITPYEGQ 770
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRL
Sbjct: 771 RAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRL 830
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 831 NVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLNNLKESMIQFAKPKKL 890
Query: 954 FKKNN 958
N
Sbjct: 891 VNAAN 895
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 1528 bits (3955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 744/961 (77%), Positives = 826/961 (85%), Gaps = 64/961 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSVDAYGPSSQTLTFL+TEE DLIG DTQGSE +FTDFT+PSQ TQASQ D +V+
Sbjct: 1 MSVDAYGPSSQTLTFLETEENDLIGADTQGSECEFTDFTIPSQ--TQASQHDHAGP-KVS 57
Query: 61 GKQ--NLDNSNLNLVSQKLHELQFEEEEDDGNEFFN-KELPPHACKYCGIHDPAYVIMCN 117
G Q N N+ + + L ELQFEEE+ E+FN KELP +ACKYCGIH+P V+MCN
Sbjct: 58 GVQLNNNINNKIANATSALGELQFEEED---EEYFNSKELPNYACKYCGIHEPNCVVMCN 114
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
CKKWFCNGRG+TSGSHIINHLVRAKHKEVTLHKDGPLGET+LECY+CGVRN+FVLGFIP
Sbjct: 115 CCKKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETILECYSCGVRNVFVLGFIP 174
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCAAQNSLKDMNWDQ+QWKPLI DR FL+WLVK+P+EQEQ R RQ++
Sbjct: 175 AKADSVVVLLCRQPCAAQNSLKDMNWDQDQWKPLITDRCFLTWLVKIPSEQEQLRARQIS 234
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+ QI KLEE+WKDN +ATFQDLE+PGVDE+P Q
Sbjct: 235 AQQINKLEELWKDNVDATFQDLERPGVDEEPQQ--------------------------- 267
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
V +R++ DGYQYQNIFGPLVKLEADYDKRLKES
Sbjct: 268 ----------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKRLKES 299
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKI 417
QTQEN+ VRWDVGLNKK+IAYF+LAKTDGDM+LM GDEL+LRY + K+W+G+GHVIK+
Sbjct: 300 QTQENIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELRLRYVGEMHKSWAGVGHVIKV 359
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
PDN+G+++G+ELK+ GAPT+ + F VDFIWKSTSFDRMQLALRKFAVDD SVSAYIYH
Sbjct: 360 PDNYGEDIGIELKNGNGAPTDCNSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYH 419
Query: 478 RLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
RLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSA
Sbjct: 420 RLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSA 479
Query: 538 TIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHN 597
TIVYQLVKQ G PVLVCAPSN AVDQLTEKIH+T LKVVR+CAKSREAIDSPVSFLALHN
Sbjct: 480 TIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKTNLKVVRLCAKSREAIDSPVSFLALHN 539
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
QIR ME N+EL+KL QLK+ETGELSS DEKRYRMLKK AEK LL+ ADVICCTCVGAGDP
Sbjct: 540 QIRKMEANTELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDP 599
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
RL+++KFHSILIDESMQATEPECMVPV+LG KQLILVGDHCQLGPVVMCKKAARAGLSQS
Sbjct: 600 RLVRLKFHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQS 659
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
LFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCADERKL+KIDFPWPV D
Sbjct: 660 LFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVID 719
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
+PM F+VTQGQEEIAGSGTSY+NRTEA+NVEKI TRF+R G+KPEQIGVITPYEGQRA+L
Sbjct: 720 RPMFFHVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQIGVITPYEGQRAYL 779
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
VQ+MQYQGSL +K YQEIE+ASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRLNVAL
Sbjct: 780 VQYMQYQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVAL 839
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
TRAKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPL NLKESLI F+KPK+ +
Sbjct: 840 TRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLTNLKESLIQFAKPKKLTNSD 899
Query: 958 N 958
N
Sbjct: 900 N 900
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 1526 bits (3952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 744/965 (77%), Positives = 816/965 (84%), Gaps = 77/965 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLD-----SVN 55
MSVDAYGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPS SQTQASQ D S
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSPSQTQASQHDATQTQSSQ 60
Query: 56 QIQVNGKQNLDNSNLNLV--SQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
IQVNG + +L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V
Sbjct: 61 PIQVNGTSGSSSLDLKITGAAQSLAELQFEEEEEEA--YYNRDLPDHACKYCGIHEASCV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY C RN+FVL
Sbjct: 119 VMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYNCATRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCAAQ+SLKDMN FLSWLVK+P+EQEQ R
Sbjct: 179 GFIPAKADSVVVLLCRQPCAAQSSLKDMN-------------CFLSWLVKIPSEQEQLRA 225
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 226 RQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ----------------------- 262
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
V +R++ DGYQYQNIFGPLVKLEADYDKR
Sbjct: 263 --------------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKR 290
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
LKESQTQEN+ VRWDVGLNKK IAYF LAKTDGDM+LM GDEL+LRY + K WSG+GH
Sbjct: 291 LKESQTQENIEVRWDVGLNKKIIAYFMLAKTDGDMKLMHGDELRLRYLGELHKPWSGIGH 350
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQ ALRKFAVDD SVSA
Sbjct: 351 VIKIPDNYGEEVGIELKNNSGAPTECNSNFVVDFIWKSTSFDRMQSALRKFAVDDSSVSA 410
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 411 YIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKT 470
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFL
Sbjct: 471 VTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFL 530
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ ADVICCTCVG
Sbjct: 531 ALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVG 590
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 591 AGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 650
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFFYEGSLQNGVCADERKL KIDFPW
Sbjct: 651 LSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDFPW 710
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
PV DKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKITTRF+RCG+K EQIGVITPYEGQ
Sbjct: 711 PVQDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLRCGVKSEQIGVITPYEGQ 770
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RAFLVQHMQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRL
Sbjct: 771 RAFLVQHMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRL 830
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVLSKQ LWN+LLNFYKEQKVLVEGPLNNLKES+I F+KPK+
Sbjct: 831 NVALTRAKYGIIIVGNPKVLSKQALWNHLLNFYKEQKVLVEGPLNNLKESMIQFAKPKKL 890
Query: 954 FKKNN 958
N
Sbjct: 891 VNAAN 895
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 1524 bits (3947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/959 (77%), Positives = 821/959 (85%), Gaps = 65/959 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSVDAYGPSSQTLTFL+TEE DLIG DTQGSE +FTDFT+PSQ TQASQ D
Sbjct: 1 MSVDAYGPSSQTLTFLETEENDLIGADTQGSECEFTDFTIPSQ--TQASQHDHAGP---- 54
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFN-KELPPHACKYCGIHDPAYVIMCNIC 119
N N+ + + L ELQFEEE+ E+FN KELP +ACKYCGIH+P V+MCN C
Sbjct: 55 KLNNNINNKIANATSALGELQFEEED---EEYFNSKELPNYACKYCGIHEPNCVVMCNCC 111
Query: 120 KKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAK 179
KKWFCNGRG+TSGSHIINHLVRAKHKEVTLHKDGPLGET+LECY+CGVRN+FVLGFIPAK
Sbjct: 112 KKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETILECYSCGVRNVFVLGFIPAK 171
Query: 180 ADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSA 239
ADSVVVLLCR PCAAQNSLKDMNWDQ+QWKPLI DR FL+WLVK+P+EQEQ R RQ+++
Sbjct: 172 ADSVVVLLCRQPCAAQNSLKDMNWDQDQWKPLITDRCFLTWLVKIPSEQEQLRARQISAQ 231
Query: 240 QIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRL 299
QI KLEE+WKDN +ATFQDLE+PGVDE+P Q
Sbjct: 232 QINKLEELWKDNVDATFQDLERPGVDEEPQQ----------------------------- 262
Query: 300 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQT 359
V +R++ DGYQYQNIFGPLVKLEADYDKRLKESQT
Sbjct: 263 --------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKRLKESQT 296
Query: 360 QENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPD 419
QEN+ VRWDVGLNKK+IAYF+LAKTDGDM+LM GDEL+LRY + K+W+G+GHVIK+PD
Sbjct: 297 QENIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELRLRYVGEMHKSWAGVGHVIKVPD 356
Query: 420 NFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 479
N+G+++G+ELK+ GAPT+ + F VDFIWKSTSFDRMQLALRKFAVDD SVSAYIYHRL
Sbjct: 357 NYGEDIGIELKNGNGAPTDCNSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYHRL 416
Query: 480 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATI 539
LGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATI
Sbjct: 417 LGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATI 476
Query: 540 VYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI 599
VYQLVKQ G PVLVCAPSN AVDQLTEKIH+T LKVVR+CAKSREAIDSPVSFLALHNQI
Sbjct: 477 VYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKTNLKVVRLCAKSREAIDSPVSFLALHNQI 536
Query: 600 RNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
R ME N+EL+KL QLK+ETGELSS DEKRYRMLKK AEK LL+ ADVICCTCVGAGDPRL
Sbjct: 537 RKMEANTELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRL 596
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+++KFHSILIDESMQATEPECMVPV+LG KQLILVGDHCQLGPVVMCKKAARAGLSQSLF
Sbjct: 597 VRLKFHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 656
Query: 720 ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
ERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCADERKL+KIDFPWPV D+P
Sbjct: 657 ERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPVIDRP 716
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
M F+VTQGQEEIAGSGTSY+NRTEA+NVEKI TRF+R G+KPEQIGVITPYEGQRA+LVQ
Sbjct: 717 MFFHVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQIGVITPYEGQRAYLVQ 776
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
+MQYQGSL +K YQEIE+ASVDAFQGREKD+IIMSCVRSN+HQGIGFLNDPRRLNVALTR
Sbjct: 777 YMQYQGSLHSKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALTR 836
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
AKYGII++GNPKVLSKQPLWN+LL+FYKEQKVLVEGPL NLKESLI F+KPK+ +N
Sbjct: 837 AKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLTNLKESLIQFAKPKKLTNSDN 895
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 1520 bits (3935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/962 (75%), Positives = 813/962 (84%), Gaps = 63/962 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQ-- 58
MSVD YGPSSQ LTFL+TEE D+IG DTQGSEF+FTDFTLPSQSQ SQLDS +
Sbjct: 1 MSVDTYGPSSQNLTFLETEEADMIGADTQGSEFEFTDFTLPSQSQPPMSQLDSSSSTHRM 60
Query: 59 --VNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
++ K + D++N+ V++K+ ELQFE+EE+D FF KELP +ACKYCGIHDP V+MC
Sbjct: 61 QLLSNKTDKDDTNVITVTKKIGELQFEDEEEDS--FFTKELPYYACKYCGIHDPGCVVMC 118
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
NICKKWFCNGRG+TSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY+CGV+N+FVLGFI
Sbjct: 119 NICKKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYSCGVKNVFVLGFI 178
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAKADSVV+LLCR PC+ QN+LKDMNWDQEQWKPLIADR FL+WLVKVP E +Q R R V
Sbjct: 179 PAKADSVVILLCRQPCSTQNALKDMNWDQEQWKPLIADRCFLTWLVKVPNETDQLRSRHV 238
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
++ QIAKLEE+WKDN EAT DL+KPGVDE+P Q++L
Sbjct: 239 SATQIAKLEELWKDNNEATINDLDKPGVDEEP-QIVL----------------------- 274
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
+R++ DG+QYQN+FGPLVKLEADYDKRLKE
Sbjct: 275 -------------LRYE------------------DGFQYQNVFGPLVKLEADYDKRLKE 303
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIK 416
SQTQEN+TVRWDVGLNKK+IAYF LAKTDGDMRLM GDEL+LR + W+G+GHVIK
Sbjct: 304 SQTQENITVRWDVGLNKKAIAYFHLAKTDGDMRLMHGDELRLRLT--GENPWAGIGHVIK 361
Query: 417 IPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
IPDN+G++VGLELK + G PTE T+ + VDFIWKSTSFDRMQ +L++FA D+ SVS+YIY
Sbjct: 362 IPDNYGEDVGLELKINNGVPTEITSNYVVDFIWKSTSFDRMQCSLKRFATDESSVSSYIY 421
Query: 477 HRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTS 536
HRLLGH D+++FR H+PKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTS
Sbjct: 422 HRLLGHEFDDLMFRSHMPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKTVTS 481
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 596
ATIVYQLVK G PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH
Sbjct: 482 ATIVYQLVKINGGPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 541
Query: 597 NQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
NQ+R M N EL+K QLK+ETGELS ADEKRYR LKK AE+ LL ADVIC TCVGAGD
Sbjct: 542 NQVRKMSCNVELQKFQQLKDETGELSMADEKRYRALKKAAERELLKAADVICTTCVGAGD 601
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
PRL++ KFHSILIDESMQATEPECMVPV+LG KQLILVGDHCQLGPVVMCKKAARAGLSQ
Sbjct: 602 PRLVRFKFHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQ 661
Query: 717 SLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
SLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCAD+RKLSKI+FPWPV
Sbjct: 662 SLFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADDRKLSKIEFPWPVA 721
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
DKPMLFYVTQGQEEIAGSGTSY+NRTEA+NVEKI TRF+RCG+KP+QIG+ITPYEGQRA+
Sbjct: 722 DKPMLFYVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRCGVKPDQIGIITPYEGQRAY 781
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
LVQ+MQYQ LPAK+YQEIE+ASVDAFQGREKDLIIMSCVRSN+HQGIGFLNDPRRLNVA
Sbjct: 782 LVQYMQYQAPLPAKVYQEIEIASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVA 841
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LTRAKYGI+++GNPKVLSKQ LWN+LLN+YK VLVEGPLNNLKESLI SKPKQ
Sbjct: 842 LTRAKYGILIVGNPKVLSKQQLWNHLLNYYKANNVLVEGPLNNLKESLIQLSKPKQLVNA 901
Query: 957 NN 958
N
Sbjct: 902 AN 903
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 1514 bits (3920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 738/975 (75%), Positives = 822/975 (84%), Gaps = 75/975 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLD----SVNQ 56
MSVD YGPSSQTLTFLDTEE DLIG DTQGSEFDFTDFTLPSQSQTQASQLD ++Q
Sbjct: 1 MSVDTYGPSSQTLTFLDTEEADLIGADTQGSEFDFTDFTLPSQSQTQASQLDVGPSQISQ 60
Query: 57 IQVN-----GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPA 111
+QVN +DN +N V+ L +LQFEEEE++G ++NKELP ACKYCGIHDP
Sbjct: 61 VQVNKIGGPSVIGIDN-GVNSVTNALGDLQFEEEEEEG--YYNKELPAFACKYCGIHDPN 117
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+MCN+CKKWFCNGRG TSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY CGVRN+F
Sbjct: 118 CVVMCNVCKKWFCNGRGSTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYACGVRNVF 177
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
VLGFIPAKADSVVVLLCR PCAAQ SLKDMNW+QEQWKPLI DRSFL+WLVK P+E EQ
Sbjct: 178 VLGFIPAKADSVVVLLCRQPCAAQTSLKDMNWEQEQWKPLILDRSFLTWLVKSPSETEQL 237
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKL 291
R RQ+++ QI KLEE+WKDN +ATFQDLEKPGVDE+P Q
Sbjct: 238 RARQISAVQINKLEELWKDNVDATFQDLEKPGVDEEPQQ--------------------- 276
Query: 292 EADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYD 351
V +R++ DG+QYQNIFGPLVKLEADYD
Sbjct: 277 ----------------VLLRYE------------------DGFQYQNIFGPLVKLEADYD 302
Query: 352 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-------DMRLMQGDELKLRYSYDA 404
K+LKESQTQ+NV VRWDVGLNKK+IAYF+LAK DG +M+LM GDEL+LRY +
Sbjct: 303 KKLKESQTQDNVEVRWDVGLNKKTIAYFTLAKQDGGKFILSKNMKLMHGDELRLRYLGEL 362
Query: 405 SKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKF 464
K WSG+GHVIK+PDN+G+E+G+ELKS AGAPTE T+ F VDF+WKSTSFDRMQL LRKF
Sbjct: 363 HKQWSGVGHVIKVPDNYGEEIGIELKSGAGAPTECTSNFVVDFVWKSTSFDRMQLGLRKF 422
Query: 465 AVDDQSVSAYIYHRLLGHNVDEVLF-RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 523
AVDD SVS YIYHRLLGH+ +EVL R +PKHFSAPNLPDLNRSQVYAVK A+QRPLSL
Sbjct: 423 AVDDSSVSGYIYHRLLGHDYEEVLLSRVQIPKHFSAPNLPDLNRSQVYAVKQALQRPLSL 482
Query: 524 IQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR 583
IQGPPGTGKTVTSATIVY L +Q VLVCAPSNIAVDQLTEKIHRTGLKVVR+CAKSR
Sbjct: 483 IQGPPGTGKTVTSATIVYHLARQPTGAVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSR 542
Query: 584 EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDN 643
EAIDSPVSFLALHNQIRNM+ N++LKKL QLK+ETGELSS+DEKRYRMLKK++EK +L+
Sbjct: 543 EAIDSPVSFLALHNQIRNMDSNTDLKKLQQLKDETGELSSSDEKRYRMLKKSSEKEMLEA 602
Query: 644 ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPV 703
ADVICCTCVGAGDPRL ++KFHSILIDESMQ+TEPECMVPV+LGA+QLILVGDHCQLGPV
Sbjct: 603 ADVICCTCVGAGDPRLARLKFHSILIDESMQSTEPECMVPVVLGARQLILVGDHCQLGPV 662
Query: 704 VMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
VMCKKAARAGLSQSLFERLVVLGIRP+RLEVQYRMHPELS+FPS+FFYEGSLQNGVC++E
Sbjct: 663 VMCKKAARAGLSQSLFERLVVLGIRPYRLEVQYRMHPELSRFPSDFFYEGSLQNGVCSEE 722
Query: 764 RKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ 823
RKL+K+DFPWP DKPMLFYVT GQEEIAGSGTSY+NRTEASNVEKI T+F+R G+KPEQ
Sbjct: 723 RKLAKVDFPWPANDKPMLFYVTTGQEEIAGSGTSYLNRTEASNVEKIVTKFLRAGIKPEQ 782
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
IG+ITPYEGQRA+LVQ MQYQGSL +K+YQEIEVASVDAFQGREKD+IIMSCVRSN+ G
Sbjct: 783 IGLITPYEGQRAYLVQFMQYQGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNELLG 842
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
IGFLNDPRRLNVALTRAKYGII+IGNPKVLSKQPLWN+LLNFYKEQKVLVEGPLNNLKES
Sbjct: 843 IGFLNDPRRLNVALTRAKYGIIIIGNPKVLSKQPLWNHLLNFYKEQKVLVEGPLNNLKES 902
Query: 944 LILFSKPKQYFKKNN 958
I F+KPK+ N
Sbjct: 903 AIQFAKPKKLVNSAN 917
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 1489 bits (3855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 724/963 (75%), Positives = 815/963 (84%), Gaps = 63/963 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLD----SVNQ 56
MSVDAYGPSSQTLTFL+TEE DLIG DTQGSEF+FTDFTLPSQSQTQASQ D S NQ
Sbjct: 1 MSVDAYGPSSQTLTFLETEEADLIGADTQGSEFEFTDFTLPSQSQTQASQHDHGITSSNQ 60
Query: 57 IQVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
I G+ +L +S ++ V+ + ELQFEEE D + +KELP HACKYCGIHDPA V+MC
Sbjct: 61 INGLGRGDL-HSKVSSVANAIAELQFEEE--DEALYSSKELPEHACKYCGIHDPATVVMC 117
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
NIC KWFCNGRG+TSGSHIINHLVRAKHKE LH+DGPLGET+LECY+CG RN+FVLGFI
Sbjct: 118 NICNKWFCNGRGNTSGSHIINHLVRAKHKEAALHRDGPLGETLLECYSCGARNVFVLGFI 177
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAKADSVVVLLCR PCAAQ+SLKDMNWDQEQWKPLI+DR+FLSWLVKVP+E EQ R RQV
Sbjct: 178 PAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLISDRAFLSWLVKVPSEAEQMRARQV 237
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
T QI +LEE+W+DN +ATFQDLEKPGVDE+PHQ
Sbjct: 238 TPQQIGRLEELWRDNVDATFQDLEKPGVDEEPHQ-------------------------- 271
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
V +R++ DGYQYQNIFGPLVKLEADYDKRLKE
Sbjct: 272 -----------VLLRYE------------------DGYQYQNIFGPLVKLEADYDKRLKE 302
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIK 416
SQTQE + VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+LRY + K WSG+GHVIK
Sbjct: 303 SQTQEGIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELHKAWSGVGHVIK 362
Query: 417 IPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
+PDN+GD+VGLELKS AGAP E T+ F VDFIWKSTSFDRMQLALRKFAVDD SVS YIY
Sbjct: 363 VPDNYGDDVGLELKSGAGAPLECTSNFVVDFIWKSTSFDRMQLALRKFAVDDSSVSGYIY 422
Query: 477 HRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTS 536
RLLGH V+EVLFR HLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTS
Sbjct: 423 RRLLGHEVEEVLFRVHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTS 482
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 596
ATIVYQLV+Q G PVLVCAPSN AVDQLTEKIHRTGLKVVR+CAKSREA++S VSFLALH
Sbjct: 483 ATIVYQLVRQNGGPVLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLALH 542
Query: 597 NQIRNM-EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG 655
Q R + +SEL+KL +LKEE GELS+ADE+RYR L++ AE+ LLD ADV+C TCVGAG
Sbjct: 543 EQARALGSADSELRKLTRLKEEAGELSAADERRYRALRRAAERRLLDAADVVCTTCVGAG 602
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
DPR+ +++F SILIDE MQ+TEPECMVPV+LGA+QLILVGDHCQLGPVVMCKKAA+AGLS
Sbjct: 603 DPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAGLS 662
Query: 716 QSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
QSLFERLVVLGIRPFRLEVQYRMHPELS+FPS+FFYEGSLQNGV A+ER+L KIDFPWP
Sbjct: 663 QSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPWPR 722
Query: 776 PDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRA 835
PD+PM FYVTQGQEEIAGSGTSY+NRTEA+NVEK+TTRF++ G++PEQIG+ITPYEGQR+
Sbjct: 723 PDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQRS 782
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
+LVQHMQYQGSL AK+YQEIEVASVDAFQGREKD+IIMSCVRSN+HQGIGFL+DPRRLNV
Sbjct: 783 YLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRLNV 842
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
ALTRAKYG+IV+GNPKVLSKQPLWN+LL FYKE++VL EGPL+NLKES I F+KPK+
Sbjct: 843 ALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERRVLTEGPLSNLKESAIQFAKPKKLVN 902
Query: 956 KNN 958
N
Sbjct: 903 AQN 905
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 1469 bits (3804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 695/958 (72%), Positives = 808/958 (84%), Gaps = 66/958 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLD------SV 54
MSVD +GP+SQTLTFLDTEE DL+G DTQG++FDF DFTLPSQ TQASQ+D S+
Sbjct: 1 MSVDTFGPNSQTLTFLDTEENDLLGADTQGTDFDFRDFTLPSQ--TQASQIDHASLHKSM 58
Query: 55 NQIQVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVI 114
+ Q NG +D S L + L++LQFEEE+++G +++K+LPPHACKYCGIHDP V+
Sbjct: 59 GKHQANGLDTID-SQLATAMKNLNDLQFEEEDEEG--YYSKDLPPHACKYCGIHDPGCVV 115
Query: 115 MCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLG 174
MCNICKKWFCNG+G+TSGSHI+NHLVRAKHKEVTLH+DGPLGETVLECY+CGVRN+FVLG
Sbjct: 116 MCNICKKWFCNGKGNTSGSHIVNHLVRAKHKEVTLHRDGPLGETVLECYSCGVRNVFVLG 175
Query: 175 FIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGR 234
FIPAKADSVVVLLCR PCAAQ+SLKDMNWD EQWKPLIADR FLSWLV+ P+E EQ R R
Sbjct: 176 FIPAKADSVVVLLCRQPCAAQSSLKDMNWDIEQWKPLIADRCFLSWLVRSPSEAEQMRAR 235
Query: 235 QVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEAD 294
Q+T+ Q+ +LEE+WK+ EA+F+DLE+PGVDE+P
Sbjct: 236 QLTAQQLNRLEEMWKEKPEASFEDLERPGVDEEP-------------------------- 269
Query: 295 YDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRL 354
++V +R++ DGYQYQNIFGPLVKLEADYD+R+
Sbjct: 270 -----------QHVLLRYE------------------DGYQYQNIFGPLVKLEADYDRRV 300
Query: 355 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHV 414
KE+QTQ+NV VRWDVGLNKK++AYFSL KTD DM+LM GDEL+LRY + K W+GLGHV
Sbjct: 301 KEAQTQDNVHVRWDVGLNKKTVAYFSLQKTDSDMKLMHGDELRLRYLGELHKPWTGLGHV 360
Query: 415 IKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAY 474
IK+PDN+ +EVG+ELK+S GAPTE +T F VDF+WKSTSFDRMQ ALRKFAVD+ SVSAY
Sbjct: 361 IKLPDNYSEEVGIELKNSNGAPTECSTNFVVDFVWKSTSFDRMQSALRKFAVDESSVSAY 420
Query: 475 IYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTV 534
IYHRLLGH V++++FR HLPKHFSAP+LP+LNRSQV+AVK A+QRPL+LIQGPPGTGKTV
Sbjct: 421 IYHRLLGHEVEDIVFRLHLPKHFSAPDLPELNRSQVFAVKQAVQRPLTLIQGPPGTGKTV 480
Query: 535 TSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLA 594
TSATIVY L K PVLVCAPSNIAVDQLTEKIHRTGLKVVR+CAKSREAIDSPVSFLA
Sbjct: 481 TSATIVYHLAKLGSGPVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPVSFLA 540
Query: 595 LHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LHNQ+R +E SEL+KL+QLKEE GELS DEKRYRMLK+ AE+ LL+ ADV+ CTCVGA
Sbjct: 541 LHNQVRCLEGASELRKLVQLKEEVGELSQGDEKRYRMLKRQAERELLEAADVLACTCVGA 600
Query: 655 GDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
GD RL +IKF SILIDESMQATEPECMVPV+LGA+QLILVGDHCQLGPVVMCK AA+AGL
Sbjct: 601 GDVRLARIKFASILIDESMQATEPECMVPVVLGARQLILVGDHCQLGPVVMCKPAAKAGL 660
Query: 715 SQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
SQSLFERLVVLGIRPFRLEVQYRMHP LS+FPSNFFYEGSLQNGVCA++R L +DFPWP
Sbjct: 661 SQSLFERLVVLGIRPFRLEVQYRMHPRLSEFPSNFFYEGSLQNGVCAEDRILRGVDFPWP 720
Query: 775 VPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQR 834
+PD+PM FYVT GQEEIAGSGTSY+NRTEASNVEKI TRF+R G+KPEQIG+ITPYEGQR
Sbjct: 721 MPDRPMFFYVTLGQEEIAGSGTSYLNRTEASNVEKIATRFLRSGVKPEQIGIITPYEGQR 780
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
A+LVQ+MQ+QGSL AK+YQ+IE+ASVDAFQGREKDLIIMSCVRSN++QGIGFLNDPRRLN
Sbjct: 781 AYLVQYMQHQGSLHAKLYQDIEIASVDAFQGREKDLIIMSCVRSNENQGIGFLNDPRRLN 840
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
VA+TRA+YGII++GNPKVL+KQP+WN+LL+FYKE VL EG LNNLKES++ F KPK+
Sbjct: 841 VAMTRARYGIIIVGNPKVLAKQPVWNHLLHFYKENHVLTEGALNNLKESMMQFPKPKK 898
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 1466 bits (3795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/964 (72%), Positives = 805/964 (83%), Gaps = 65/964 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEE-TDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDS-----V 54
MSVDAYGPSSQTLTFLDTEE +DL+G DTQGSEFDFTDFTLPSQ TQASQ D
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEASDLLGADTQGSEFDFTDFTLPSQ--TQASQADGGQTQGS 58
Query: 55 NQIQVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVI 114
Q+ G+ + + Q L EL FEE+E+D +++ K+LP HACKYCGIHDP V+
Sbjct: 59 RGGQLPGEVRSNGLEVAAAGQALGELTFEEDEED--QYYAKDLPEHACKYCGIHDPGCVV 116
Query: 115 MCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLG 174
CN+CK+WFCNGRG+TSGSH++NHLVRAKHKEVTLH+DGPLGETVLECY+C RN+FVLG
Sbjct: 117 QCNVCKRWFCNGRGNTSGSHMVNHLVRAKHKEVTLHRDGPLGETVLECYSCACRNVFVLG 176
Query: 175 FIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGR 234
FIPAKADSVVVLLCR PCAAQ+SLKDMNWD +QWKPLI DR FL WLV+ P E++Q R R
Sbjct: 177 FIPAKADSVVVLLCRHPCAAQSSLKDMNWDPDQWKPLIHDRCFLPWLVRAPLERDQLRAR 236
Query: 235 QVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEAD 294
QVT+ QI++LEE+WKDN +A+FQDLEKPGVDE+P Q
Sbjct: 237 QVTAQQISRLEELWKDNVDASFQDLEKPGVDEEPQQ------------------------ 272
Query: 295 YDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRL 354
V +R++ DGYQYQNIFGPLVK+EADYDK+L
Sbjct: 273 -------------VLLRYE------------------DGYQYQNIFGPLVKMEADYDKKL 301
Query: 355 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHV 414
KESQTQ+N+ VRWD+GLNKK IAYF++AK+D DMRLM GDEL+LRY + K WSG+GHV
Sbjct: 302 KESQTQDNIEVRWDIGLNKKMIAYFTVAKSDTDMRLMHGDELRLRYLGELHKPWSGVGHV 361
Query: 415 IKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAY 474
IKIPDN+ +EVG+E+K++ G P+E T+ F VDF+WKSTSFDRMQ ALRKFAVD+ SVSAY
Sbjct: 362 IKIPDNYSEEVGIEMKTNLGVPSECTSNFVVDFVWKSTSFDRMQAALRKFAVDECSVSAY 421
Query: 475 IYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTV 534
IYHRLLGH V+EV+ RC LPKHFSAP LP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTV
Sbjct: 422 IYHRLLGHEVEEVVMRCPLPKHFSAPQLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTV 481
Query: 535 TSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLA 594
TSAT+VY L KQ+ PVLVCAPSNIAVDQLTEK+H+TGL+VVR+CAKSREA++SPVSFLA
Sbjct: 482 TSATVVYHLAKQSTGPVLVCAPSNIAVDQLTEKVHQTGLRVVRLCAKSREALNSPVSFLA 541
Query: 595 LHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LHNQIR+M+ +SEL KL QLK+ETGELSSADEKRYRMLKK E+ LL+ ADVICCTCVGA
Sbjct: 542 LHNQIRSMDGHSELHKLQQLKDETGELSSADEKRYRMLKKACERELLEAADVICCTCVGA 601
Query: 655 GDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
GDPRL + KFHSILIDESMQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAGL
Sbjct: 602 GDPRLARFKFHSILIDESMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGL 661
Query: 715 SQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
SQSLFERLVVLGIRP RLEVQYRMHP+L++FPSNFFYEGSLQNGV ADER++ +DFPWP
Sbjct: 662 SQSLFERLVVLGIRPLRLEVQYRMHPQLAQFPSNFFYEGSLQNGVFADERRMRGLDFPWP 721
Query: 775 VPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQR 834
P++PMLFY QGQEE+AGSGTSY+NRTEA+ VEKI TRF+R G+KP+Q+GVITPYEGQR
Sbjct: 722 QPERPMLFYACQGQEEMAGSGTSYLNRTEAALVEKICTRFLRSGVKPQQVGVITPYEGQR 781
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
A+LVQHMQ+QG+L +K+YQEIEVASVDAFQGREKDLI+MSCVRSN+HQGIGFLNDPRRLN
Sbjct: 782 AYLVQHMQFQGALHSKLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQGIGFLNDPRRLN 841
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYF 954
VALTRA+YG+I++GNPKVLSKQPLWN+LL FYKE +VLVEGPLNNLKESLI FSKP++
Sbjct: 842 VALTRARYGLIIVGNPKVLSKQPLWNHLLTFYKENRVLVEGPLNNLKESLIQFSKPRKLV 901
Query: 955 KKNN 958
N
Sbjct: 902 NTVN 905
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 1444 bits (3737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/970 (72%), Positives = 797/970 (82%), Gaps = 71/970 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPS--QSQTQASQLDSVNQI 57
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS QSQTQ QLD +
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLRGADTQPTQYDYRDFTMPSTTQSQTQGDQLD-LQSR 58
Query: 58 QVNGKQNLDNSNLNLVSQKLHELQFEEEEDD----GNEFFNKELPPHACKYCGIHDPAYV 113
+V+ + N N L ++ L +LQFEEE+D+ GN + KELPPHACKYCGIHDPA V
Sbjct: 59 RVSVQNNDINPRLASITNDLADLQFEEEDDENGVGGNSAYVKELPPHACKYCGIHDPATV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN CKKWFCNGRG TSGSHIINHLVRAKH+EVTLH DGPLGET+LECY+CGVRN+FVL
Sbjct: 119 VMCNNCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLGETILECYSCGVRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL WLVK P+EQ Q R
Sbjct: 179 GFIPAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLHWLVKQPSEQGQLRA 238
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++AQI KLEE+WKDN EATFQDLEKPG+D +P
Sbjct: 239 RQISAAQINKLEELWKDNIEATFQDLEKPGIDSEP------------------------- 273
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
+V +R++ DGYQY+ FGPLV+LEADYDK+
Sbjct: 274 ------------AHVLLRYE------------------DGYQYEKTFGPLVRLEADYDKK 303
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
LKES TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+LRY + WS +GH
Sbjct: 304 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGEPYNPWSEIGH 363
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIK+PDNFGD+VGLELK S+ AP + T+ FSVDFIWK TSFDRM ALR FAVD SVS
Sbjct: 364 VIKVPDNFGDDVGLELKCSSNAPVKCTSNFSVDFIWKCTSFDRMTRALRNFAVDRNSVSN 423
Query: 474 YIYHRLLGHN----VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPG 529
YIY RLLGH DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQGPPG
Sbjct: 424 YIYSRLLGHGRADGSDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPG 483
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSP 589
TGKTVTSATIVYQLVKQ G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSP
Sbjct: 484 TGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSP 543
Query: 590 VSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICC 649
VSFLALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR LK+ AE LL+ ADVICC
Sbjct: 544 VSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRSLKRGAENQLLEAADVICC 603
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
TCVGAGD RL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKA
Sbjct: 604 TCVGAGDMRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKA 663
Query: 710 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+
Sbjct: 664 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KL 722
Query: 770 DFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
DFPWP P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITP
Sbjct: 723 DFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITP 782
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
YEGQRA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLND
Sbjct: 783 YEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLND 842
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSK 949
PRRLNVALTRAKYGII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESLI F K
Sbjct: 843 PRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQK 902
Query: 950 PKQYFKKNNM 959
PK+ NNM
Sbjct: 903 PKKLV--NNM 910
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 1437 bits (3719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/968 (71%), Positives = 802/968 (82%), Gaps = 66/968 (6%)
Query: 1 MSVDAYGPS--SQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ-I 57
MSVDAY + SQ+LTF+DTEE +G D+QG+++DF DFT+PSQSQTQASQLD +
Sbjct: 1 MSVDAYDGTTGSQSLTFVDTEENYFVGADSQGTDYDFRDFTIPSQSQTQASQLDHLGGGS 60
Query: 58 QVNG---KQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVI 114
QVNG + +D + L+ ++ + ELQFEE+ED+ + NK+LPPHAC+YCGIH+P+ V+
Sbjct: 61 QVNGFGRRIGVDPTKLSGITSAIGELQFEEDEDEIDPAENKDLPPHACRYCGIHEPSTVV 120
Query: 115 MCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLG 174
MCNICKKWFCNGRG TSGSHI+NHLVRAKH+EVTLH DGPLGETVLECY+C VRN+FVLG
Sbjct: 121 MCNICKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHADGPLGETVLECYSCAVRNVFVLG 180
Query: 175 FIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGR 234
FIPAK+DSVVVLLCR PCAAQNS+KDMNWDQEQWKPLIADR FL WLVK+PTEQ+Q R R
Sbjct: 181 FIPAKSDSVVVLLCRQPCAAQNSIKDMNWDQEQWKPLIADRCFLFWLVKIPTEQDQLRAR 240
Query: 235 QVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEAD 294
+V++AQI KLEE+WK+N +AT +Q++ P + E
Sbjct: 241 KVSAAQINKLEELWKENVDAT-------------------------FQDLEKPGIDKEP- 274
Query: 295 YDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRL 354
+ V +R+ DGYQYQN FGPLVKLEADYD++L
Sbjct: 275 -----------QQVQLRYV------------------DGYQYQNTFGPLVKLEADYDEKL 305
Query: 355 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHV 414
KESQTQEN+ +RWD GLNKK+IAYF+LAK DGDM+LM GDELKLRY + K WS +GHV
Sbjct: 306 KESQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELKLRYVGELHKPWSCIGHV 365
Query: 415 IKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAY 474
IK+PDN+GD+VGLELK + AP E T+ FSVDFIWK TSF+RMQ ALRKFA+D +SVS Y
Sbjct: 366 IKVPDNYGDDVGLELKHNHQAPIERTSNFSVDFIWKGTSFERMQQALRKFAMDAKSVSNY 425
Query: 475 IYHRLLGH----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGT 530
IY RLLG+ +EVLFR +LPKHFSAPNLPDLNRSQVYAV+HA+QRPLSLIQGPPGT
Sbjct: 426 IYARLLGNVRADGAEEVLFRLNLPKHFSAPNLPDLNRSQVYAVRHALQRPLSLIQGPPGT 485
Query: 531 GKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV 590
GKTVTSATIVYQL + P+LVCAPSN AVDQLTEKIHRT LKVVRVCA+SREAIDSPV
Sbjct: 486 GKTVTSATIVYQLARLNSGPILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAIDSPV 545
Query: 591 SFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCT 650
SFLALHNQIRNM NSELKKL QLK+ETGELS +DE+RYR LKK AE+ LL+ ADVICCT
Sbjct: 546 SFLALHNQIRNMAQNSELKKLQQLKDETGELSLSDERRYRSLKKQAERELLEAADVICCT 605
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
CVGAGD RL +IKF+SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA
Sbjct: 606 CVGAGDLRLQRIKFNSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAA 665
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
+AGLSQSLFERLV LGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCADERKL K+D
Sbjct: 666 KAGLSQSLFERLVALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKL-KVD 724
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
FPWP PD PM F VTQGQEEIAGSGTSY+NRTEASNVEKITTRF++ G+KP+QIG+ITPY
Sbjct: 725 FPWPSPDCPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPDQIGIITPY 784
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
EGQRA+LVQ+MQYQGSL +K+YQEIE+ASVDAFQGREKD+IIMSCVR+N+HQGIGFLNDP
Sbjct: 785 EGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDP 844
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
RRLNVALTRAKYGII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKES+I F+KP
Sbjct: 845 RRLNVALTRAKYGIIIVGNPKVLAKQELWNHLLNFYKDKKVLVEGSLNNLKESMIQFTKP 904
Query: 951 KQYFKKNN 958
K+ N
Sbjct: 905 KKIINTLN 912
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 1436 bits (3718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 712/977 (72%), Positives = 799/977 (81%), Gaps = 81/977 (8%)
Query: 1 MSVDAYGP--SSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSV---- 54
MSVD Y SQTLTFLDTEE DLIG DTQG++FDF DFT+PSQSQT ASQLD +
Sbjct: 1 MSVDTYDGVVGSQTLTFLDTEENDLIGADTQGTDFDFRDFTIPSQSQTLASQLDHLVGGA 60
Query: 55 ----------NQIQVNG---KQNLDNSNLNLVSQKLHELQFEEEEDDGN-EFFNKELPPH 100
Q+NG + + S + ++ + ELQFEE+EDDG ++LPPH
Sbjct: 61 GAAGTSGTSAAGGQLNGFGRRLGSEASKIAGITSAIGELQFEEDEDDGALGAQQQDLPPH 120
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
AC+YCGIH+P+ V+MCNICKKWFCNGRG TSGSHI+NHLVRAKH+EVTLH DGPLGETVL
Sbjct: 121 ACRYCGIHEPSTVVMCNICKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHGDGPLGETVL 180
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
ECY+CGVRN+FVLGFIPAKADSVVVLLCR PCAAQNS+KDMNWDQEQWKPLIADR FL W
Sbjct: 181 ECYSCGVRNVFVLGFIPAKADSVVVLLCRQPCAAQNSIKDMNWDQEQWKPLIADRCFLFW 240
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
LVKVPTEQEQ R RQV++AQI KL ++L K VD
Sbjct: 241 LVKVPTEQEQLRARQVSAAQINKL------------EELWKENVDA-------------T 275
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIF 340
+Q++ P + E V R+ DGYQYQNIF
Sbjct: 276 FQDLEKPGIDKE------------HSPVQFRYV------------------DGYQYQNIF 305
Query: 341 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRY 400
GPLVKLEADYDKRLKESQTQEN+ +RWD GLNKK+IAYF+LAK DGDM+LM GDEL+LRY
Sbjct: 306 GPLVKLEADYDKRLKESQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELRLRY 365
Query: 401 SYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLA 460
+ + K WS +GHVIK+PDN+G++VGLELK + AP E ++ F+VDFIWK TSFDRMQ+A
Sbjct: 366 NGELHKPWSCVGHVIKVPDNYGEDVGLELKHNHQAPVECSSNFAVDFIWKGTSFDRMQMA 425
Query: 461 LRKFAVDDQSVSAYIYHRLLGHN----VDEVLFRCH-LPKHFSAPNLPDLNRSQVYAVKH 515
LRKFAVDD SVS YIY RLLGH D+V FR + LPKHFSA NLPDLNRSQVYAVKH
Sbjct: 426 LRKFAVDDNSVSNYIYSRLLGHGRQDGSDDVTFRINNLPKHFSAANLPDLNRSQVYAVKH 485
Query: 516 AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKV 575
A+QRPLSLIQGPPGTGKTVTSATIVYQLV+ G P+LVCAPSN AVDQLTEKIHRT LKV
Sbjct: 486 ALQRPLSLIQGPPGTGKTVTSATIVYQLVRLNGGPILVCAPSNTAVDQLTEKIHRTNLKV 545
Query: 576 VRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKN 635
VRVCAKSREAIDSPVSFLALHNQIRNME NS+LKKL QLK+ETGELSS+DEKRYRMLKK
Sbjct: 546 VRVCAKSREAIDSPVSFLALHNQIRNMEQNSDLKKLQQLKDETGELSSSDEKRYRMLKKQ 605
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
AE+ LL+ ADVICCTCVGAGDPRL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVG
Sbjct: 606 AERELLEAADVICCTCVGAGDPRLQRIKFSSILIDESMQSTEPECMVPVVLGAKQLILVG 665
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSL 755
DHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSL
Sbjct: 666 DHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSL 725
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI 815
QNGVCA+ERKL K+DFPWP PD PM F VTQGQEEIAGSGTSY+NRTEASNVEKITTRF+
Sbjct: 726 QNGVCAEERKL-KVDFPWPSPDTPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFL 784
Query: 816 RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
+ G+KPEQIG+ITPYEGQRA+LVQ+MQYQGSL +K+YQEIE+ASVDAFQGREKD+IIMSC
Sbjct: 785 KAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSC 844
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VRSN+HQGIGFLNDPRRLNVALTRAKYGII++GNPKVLSKQ LWN+LLNFYK++KVLVEG
Sbjct: 845 VRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDKKVLVEG 904
Query: 936 PLNNLKESLILFSKPKQ 952
LNNLKES+I F+KPK+
Sbjct: 905 SLNNLKESMIQFTKPKK 921
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 1434 bits (3713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/966 (72%), Positives = 797/966 (82%), Gaps = 68/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQV 59
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS SQ+Q +Q+++
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLPGADTQPTQYDYRDFTMPSTSQSQTQN----DQLEL 55
Query: 60 NGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN 117
+ +++ +SN L ++ L +LQFEEE+D+G + KELP HACKYCGIHDPA V+MCN
Sbjct: 56 HPRRSGGDSNPRLASITNDLADLQFEEEDDEGGSSYVKELPAHACKYCGIHDPATVVMCN 115
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
C+KWFCNGRG TSGSHIINHLVRAKH+EVTLH +GPLGET+LECY+CGVRN+FVLGFIP
Sbjct: 116 NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGFIP 175
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL WLVK P+EQ Q R RQ++
Sbjct: 176 AKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLPWLVKQPSEQGQLRARQIS 235
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+AQI KLEE+WKDN EATFQDLEKPG+D +P Q
Sbjct: 236 AAQINKLEELWKDNIEATFQDLEKPGIDSEPAQ--------------------------- 268
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
V +R++ DGYQY+ FGPLV+LEADYDK+LKES
Sbjct: 269 ----------VLLRYE------------------DGYQYEKTFGPLVRLEADYDKKLKES 300
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKI 417
TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+LRY + WS +GHVIK+
Sbjct: 301 ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYNPWSEIGHVIKV 360
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
PDNFGD+VGLELK+S+ AP + T+ F+VDFIWK TSFDRM ALRKFA+D SVS YIY
Sbjct: 361 PDNFGDDVGLELKTSSNAPVKCTSNFTVDFIWKCTSFDRMTRALRKFAMDRNSVSNYIYS 420
Query: 478 RLLGH----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
RLLGH + DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 421 RLLGHGRPDSNDEVLFRGAQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKT 480
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVK G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSPVSFL
Sbjct: 481 VTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFL 540
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR LK+ AE LL+ ADVICCTCVG
Sbjct: 541 ALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRSLKRAAENQLLEAADVICCTCVG 600
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGD RL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 601 AGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 660
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+DFPW
Sbjct: 661 LSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KLDFPW 719
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITPYEGQ
Sbjct: 720 PQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQ 779
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLNDPRRL
Sbjct: 780 RAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRL 839
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESLI F KPK+
Sbjct: 840 NVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKL 899
Query: 954 FKKNNM 959
N+
Sbjct: 900 VNSMNI 905
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 1434 bits (3713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/966 (73%), Positives = 799/966 (82%), Gaps = 71/966 (7%)
Query: 1 MSVDAYGP--SSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSV---- 54
MSVD Y +SQTLTFLDTEE DLIG DTQG+++DF DFT+PSQSQT ASQ D +
Sbjct: 1 MSVDTYDGVVNSQTLTFLDTEENDLIGADTQGTDYDFRDFTIPSQSQTLASQFDHLGAGA 60
Query: 55 -NQIQVNGKQ--NLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPA 111
+Q+ G++ D + ++ + ELQFEE+EDD ++ELPPHAC+YCGIH+P+
Sbjct: 61 GSQLNGFGRRLGGSDKVKVAGITSAIGELQFEEDEDDPVAQ-SQELPPHACRYCGIHEPS 119
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+MCNICKKWFCNGRG TSGSHI+NHLVRAKH+EVTLH DGPLGETVLECY+CGVRN+F
Sbjct: 120 TVVMCNICKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHGDGPLGETVLECYSCGVRNVF 179
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
VLGFIPAKADSVVVLLCR PCAAQNS+KDMNWDQEQWKPLIADR FL WLVKVPTEQEQ
Sbjct: 180 VLGFIPAKADSVVVLLCRQPCAAQNSIKDMNWDQEQWKPLIADRCFLFWLVKVPTEQEQL 239
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKL 291
R RQV++AQI KL ++L K VD +Q++ P +
Sbjct: 240 RARQVSAAQINKL------------EELWKENVDA-------------TFQDLEKPGIDK 274
Query: 292 EADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYD 351
E V R+ DGYQYQNIFGPLVKLEADYD
Sbjct: 275 EP------------AQVLFRYV------------------DGYQYQNIFGPLVKLEADYD 304
Query: 352 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGL 411
KRLKESQTQEN+ +RWD GLN+K+IAYF+LAK DGDM+LM GDEL+LRY+ + K WS +
Sbjct: 305 KRLKESQTQENIEIRWDTGLNRKTIAYFTLAKNDGDMKLMHGDELRLRYTGELHKPWSCV 364
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSV 471
GHVIK+PDN+G++VGLELK + AP E T+ F+VDFIWK TSFDRMQ+ALRKFAVDD SV
Sbjct: 365 GHVIKVPDNYGEDVGLELKHNHQAPIECTSNFAVDFIWKGTSFDRMQMALRKFAVDDNSV 424
Query: 472 SAYIYHRLLGHN----VDEVLFRCH-LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 526
S YIY RLLGH D+V FR + LPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 425 SNYIYSRLLGHGRADGSDDVTFRINNLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQG 484
Query: 527 PPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAI 586
PPGTGKTVTSATIVYQLV+ G PVLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAI
Sbjct: 485 PPGTGKTVTSATIVYQLVRLNGGPVLVCAPSNTAVDQLTEKIHRTSLKVVRVCAKSREAI 544
Query: 587 DSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADV 646
+SPVSFLALHNQIRNME NS+LKKL QLK+ETGELSS+DEKRYR LKK AE+ LL+ ADV
Sbjct: 545 ESPVSFLALHNQIRNMEQNSDLKKLQQLKDETGELSSSDEKRYRSLKKQAERELLEAADV 604
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
ICCTCVGAGDPRL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMC
Sbjct: 605 ICCTCVGAGDPRLQRIKFSSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMC 664
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
KKAA+AGLSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA+ERKL
Sbjct: 665 KKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEERKL 724
Query: 767 SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
K+DFPWP PD PM F VTQGQEEIAGSGTSY+NRTEASNVEKITTRF++ G+KP+QIG+
Sbjct: 725 -KVDFPWPSPDTPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPDQIGI 783
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPYEGQRA+LVQ+MQYQGSL +K+YQEIE+ASVDAFQGREKD+IIMSCVRSN+HQGIGF
Sbjct: 784 ITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGF 843
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
LNDPRRLNVALTRAKYGII++GNPKVLSKQ LWN+LLNFYK++KVLVEG LNNLKES+I
Sbjct: 844 LNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDKKVLVEGSLNNLKESMIQ 903
Query: 947 FSKPKQ 952
F+KPK+
Sbjct: 904 FTKPKK 909
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 1431 bits (3705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/966 (72%), Positives = 789/966 (81%), Gaps = 68/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPS--QSQTQASQLDSVNQI 57
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS QSQTQ L+ +
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLPGADTQPTQYDYRDFTMPSNSQSQTQGELLEITRRR 59
Query: 58 QVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN 117
V N L ++ L +LQFEEE+D+ F KELPPHACKYCGIHDP+ V+MCN
Sbjct: 60 SVGEM----NPRLASITNDLGDLQFEEEDDEHGGSFVKELPPHACKYCGIHDPSTVVMCN 115
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
CKKWFCNGRG TSGSHIINHLVRAKH+EVTLH DGPLGETVLECY+CGVRN+FVLGFIP
Sbjct: 116 NCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHADGPLGETVLECYSCGVRNVFVLGFIP 175
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCAAQNSLKDMNWDQ+QWKPLIADR FL WLVK P+EQ Q R RQ++
Sbjct: 176 AKADSVVVLLCRQPCAAQNSLKDMNWDQDQWKPLIADRCFLPWLVKQPSEQGQLRARQIS 235
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+AQI KLEE+WKDN +ATFQDLEKPG+D +P Q
Sbjct: 236 AAQINKLEELWKDNIDATFQDLEKPGIDSEPSQ--------------------------- 268
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
V +R++ DGYQY+ FGPLV+LEADYDK+LKES
Sbjct: 269 ----------VLLRYE------------------DGYQYEKTFGPLVRLEADYDKKLKES 300
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKI 417
TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+LRY + W+ +GHVIK+
Sbjct: 301 ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGEMYSPWNEIGHVIKV 360
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
PDNFGD++GLELKSS AP + ++ FSVDFIWK TSFDRM ALR FA+D QSVS +IY
Sbjct: 361 PDNFGDDIGLELKSSTNAPVKCSSNFSVDFIWKCTSFDRMTRALRTFAMDRQSVSNFIYS 420
Query: 478 RLLGHNV----DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
RLLGH D+VLFR PK FSAPNLPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 421 RLLGHGRPDANDDVLFRGAQPKLFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKT 480
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSPVSFL
Sbjct: 481 VTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFL 540
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQIR+ME N+ELKKL QLK+ETGELSSADEKRYR LK+ E LL+ ADVICCTCVG
Sbjct: 541 ALHNQIRSMETNTELKKLQQLKDETGELSSADEKRYRNLKRGTENQLLEAADVICCTCVG 600
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGD RL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 601 AGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 660
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+DFPW
Sbjct: 661 LSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KLDFPW 719
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITPYEGQ
Sbjct: 720 PQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQIGIITPYEGQ 779
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLNDPRRL
Sbjct: 780 RAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRL 839
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESLI F KPK+
Sbjct: 840 NVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKL 899
Query: 954 FKKNNM 959
NM
Sbjct: 900 VNTMNM 905
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 1431 bits (3704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/966 (72%), Positives = 792/966 (81%), Gaps = 68/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQV 59
MSVD Y PSS L+FLD +E +L+ G DTQ +++D+ DFT+PS SQ+Q Q+++
Sbjct: 1 MSVDTYAPSS-ALSFLDMDENELLPGADTQPTQYDYRDFTMPSTSQSQTQG----EQLEL 55
Query: 60 NGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN 117
+ +++ +S+ L ++ L +LQFEEE+D+ + KELP HACKYCGIHDPA V+MCN
Sbjct: 56 HPRRSGGDSHPRLASITNDLGDLQFEEEDDEAGSSYVKELPAHACKYCGIHDPATVVMCN 115
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
CKKWFCNGRG TSGSHIINHLVRAKH+EVTLH DGPLGET+LECY+CGVRN+FVLGFIP
Sbjct: 116 NCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLGETILECYSCGVRNVFVLGFIP 175
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLI DR FL WLVK P+EQ Q R RQ++
Sbjct: 176 AKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLITDRCFLPWLVKQPSEQGQLRARQIS 235
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+AQI KLEE+WKDN EATFQDLEKPG+D +P Q
Sbjct: 236 AAQINKLEELWKDNIEATFQDLEKPGIDSEPAQ--------------------------- 268
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
V +R++ DGYQY+ FGPLV+LEADYDK+LKES
Sbjct: 269 ----------VLLRYE------------------DGYQYEKTFGPLVRLEADYDKKLKES 300
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKI 417
TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+LRY + WS +GHVIK+
Sbjct: 301 ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYNPWSEIGHVIKV 360
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
PDNFGD+VGLELK+S+ AP + T+ FSVDFIWK TSFDRM ALR FA+D SVS YIY
Sbjct: 361 PDNFGDDVGLELKTSSNAPVKCTSNFSVDFIWKCTSFDRMTRALRNFAMDRNSVSNYIYS 420
Query: 478 RLLGHNV----DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
RLLGH DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 421 RLLGHGRPDANDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKT 480
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSPVSFL
Sbjct: 481 VTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFL 540
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR LK+ E LL+ ADVICCTCVG
Sbjct: 541 ALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRSLKRGTENQLLEAADVICCTCVG 600
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGD RL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 601 AGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 660
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+DFPW
Sbjct: 661 LSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KLDFPW 719
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITPYEGQ
Sbjct: 720 PQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQ 779
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLNDPRRL
Sbjct: 780 RAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRL 839
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESLI F KPK+
Sbjct: 840 NVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKL 899
Query: 954 FKKNNM 959
N+
Sbjct: 900 VNNLNI 905
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 1430 bits (3702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/966 (71%), Positives = 797/966 (82%), Gaps = 68/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQV 59
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS SQ+Q +Q+++
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLPGADTQPTQYDYRDFTMPSTSQSQTQN----DQLEL 55
Query: 60 NGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN 117
+ +++ ++N L ++ L +LQFEEE+D+G + KELP HACKYCGIHDPA V+MCN
Sbjct: 56 HPRRSGGDANPRLASITNDLADLQFEEEDDEGGSSYVKELPVHACKYCGIHDPATVVMCN 115
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
C+KWFCNGRG TSGSHIINHLVRAKH+EVTLH +GPLGET+LECY+CGVRN+FVLGFIP
Sbjct: 116 NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGFIP 175
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL WLVK P+EQ Q R RQ++
Sbjct: 176 AKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLPWLVKQPSEQGQLRARQIS 235
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+AQI KLEE+WKDN EATFQDLEKPG+D +P Q
Sbjct: 236 AAQINKLEELWKDNIEATFQDLEKPGIDSEPAQ--------------------------- 268
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
V +R++ DGYQY+ FGPLV+LEADYDK+LKES
Sbjct: 269 ----------VLLRYE------------------DGYQYEKTFGPLVRLEADYDKKLKES 300
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKI 417
TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+L Y + WS +GHVIK+
Sbjct: 301 ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYIPWSEIGHVIKV 360
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
PDNFGD+VGLELK+S+ AP + T+ F+VDFIWK TSFDRM ALRKFA+D SVS YIY
Sbjct: 361 PDNFGDDVGLELKTSSNAPVKCTSNFTVDFIWKCTSFDRMTRALRKFAIDRNSVSNYIYS 420
Query: 478 RLLGH----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
RLLGH + DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 421 RLLGHGRPDSNDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKT 480
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVK G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSPVSFL
Sbjct: 481 VTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFL 540
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR+LK+ AE LL+ ADVICCTCVG
Sbjct: 541 ALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRILKRAAENQLLEAADVICCTCVG 600
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGD RL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 601 AGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 660
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+DFPW
Sbjct: 661 LSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KLDFPW 719
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITPYEGQ
Sbjct: 720 PQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQ 779
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLNDPRRL
Sbjct: 780 RAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRL 839
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESLI F KPK+
Sbjct: 840 NVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKL 899
Query: 954 FKKNNM 959
N+
Sbjct: 900 VNSMNI 905
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 1427 bits (3695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/988 (71%), Positives = 789/988 (79%), Gaps = 86/988 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPS--QSQTQASQLDSVN-- 55
MSVD Y PSS LTFLD ++ +L+ G DTQ + +D+ DFT+PS QSQTQ QL +
Sbjct: 1 MSVDTYAPSS-ALTFLDMDDNELLRGADTQPTPYDYRDFTMPSTSQSQTQGDQLPELQPR 59
Query: 56 QIQVNGKQNLDNSNLNLVSQKLHELQFEEEEDD--------------------GNEFFNK 95
++ ++ L L ++ L ELQFEEE+D+ G + K
Sbjct: 60 RVSIHSNDQLIQPRLGSITNVLAELQFEEEDDESIGGGGGGVGGGNGIGRCVGGTSAYVK 119
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELP HACKYCGIHDPA V+MCN CKKWFCNGRG TSGSHIINHLVRAKH+EVTLH DGPL
Sbjct: 120 ELPAHACKYCGIHDPATVVMCNNCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPL 179
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
GET+LECY+CGVRN+FVLGFIPAKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR
Sbjct: 180 GETILECYSCGVRNVFVLGFIPAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADR 239
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRY 275
FL+WLVK P+EQ Q R RQ+++AQI KLEE+WKDN EATFQDLEKPG+D +P Q
Sbjct: 240 CFLAWLVKQPSEQGQLRARQISAAQINKLEELWKDNIEATFQDLEKPGIDSEPSQ----- 294
Query: 276 EDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQ 335
V +R++ DGYQ
Sbjct: 295 --------------------------------VLLRYE------------------DGYQ 304
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDE 395
Y+ FGPLV LEADYDK+LKES TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDE
Sbjct: 305 YEKTFGPLVSLEADYDKKLKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDE 364
Query: 396 LKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFD 455
L+LRY + WS +GHVIK+PDNFGD+VGLELK + AP + T+ FSVDFIWK TSFD
Sbjct: 365 LRLRYVGELYNPWSEIGHVIKVPDNFGDDVGLELKCFSNAPLKFTSNFSVDFIWKCTSFD 424
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHN----VDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
RM ALR FA+D SVS YIY RLLGH DEVLFR PK +SAP+LPDLNRSQVY
Sbjct: 425 RMTRALRNFAMDRNSVSNYIYSRLLGHGRADGSDEVLFRGPQPKLYSAPHLPDLNRSQVY 484
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT 571
AVKHA+QRPLSLIQGPPGTGKTVTSATIVYQLVKQ G VLVCAPSN AVDQLTEKIHRT
Sbjct: 485 AVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRT 544
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM 631
LKVVRVCAKSREAIDSPVSFLALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR
Sbjct: 545 NLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRS 604
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
LK+ E LL+ ADVICCTCVGAGD RL +IKF SILIDESMQ+TEPECMVPV+LGAKQL
Sbjct: 605 LKRATENQLLEAADVICCTCVGAGDVRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQL 664
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFY
Sbjct: 665 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFY 724
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EGSLQNGVCA++R+L K+DFPWP PD+PM F VTQGQEEIAGSGTS++NRTEA+NVEKIT
Sbjct: 725 EGSLQNGVCAEDRRL-KLDFPWPQPDRPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKIT 783
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
TRF++ G+KPEQIG+ITPYEGQRA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+I
Sbjct: 784 TRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDII 843
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
IMSCVRSN+ QGIGFLNDPRRLNVALTRAKYGII++GNPKVLSKQ LWN+LLNFYK++KV
Sbjct: 844 IMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDRKV 903
Query: 932 LVEGPLNNLKESLILFSKPKQYFKKNNM 959
LVEG LNNLKESLI F KPK+ N+
Sbjct: 904 LVEGSLNNLKESLIHFQKPKKLVNSMNI 931
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 1427 bits (3693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/966 (71%), Positives = 796/966 (82%), Gaps = 68/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQV 59
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS SQ+Q +Q+++
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLPGADTQPTQYDYRDFTMPSNSQSQTQN----DQLEM 55
Query: 60 NGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN 117
+ +++ +S+ L ++ L +LQFEEE+D+ + KELPPHACKYCGIHDPA V+MCN
Sbjct: 56 HSRRSAGDSHPRLASITNDLADLQFEEEDDEPGSSYVKELPPHACKYCGIHDPATVVMCN 115
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
C+KWFCNGRG TSGSHIINHLVRAKH+EVTLH +GPLGET+LECY+CGVRN+FVLGFIP
Sbjct: 116 NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGFIP 175
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL+WLVK P+EQ Q R RQ++
Sbjct: 176 AKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQIS 235
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+AQI KLEE+WKDN EATFQDLEKPG+D +P
Sbjct: 236 AAQINKLEELWKDNIEATFQDLEKPGIDSEP----------------------------- 266
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
+V +R++ DGYQY+ FGPLV+LEA+YD++LKES
Sbjct: 267 --------AHVLLRYE------------------DGYQYEKTFGPLVRLEAEYDQKLKES 300
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKI 417
TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+L Y + WS +GHVIK+
Sbjct: 301 ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGEMYNPWSEVGHVIKV 360
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
PDNFGD+VGLELKSS AP + T+ F+VDFIWK TSFDRM ALRKFA+D SVS +IY
Sbjct: 361 PDNFGDDVGLELKSSTSAPVKCTSNFTVDFIWKCTSFDRMTRALRKFAIDRNSVSNFIYS 420
Query: 478 RLLGH----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
RLLGH + DEVLFR PK FSAP+LPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 421 RLLGHGRADSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKT 480
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVK G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSPVSFL
Sbjct: 481 VTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFL 540
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR LK+ +E LL+ ADVICCTCVG
Sbjct: 541 ALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRSLKRASENQLLEAADVICCTCVG 600
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGD RL ++KF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 601 AGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 660
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+DFPW
Sbjct: 661 LSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KLDFPW 719
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITPYEGQ
Sbjct: 720 PQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQ 779
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLNDPRRL
Sbjct: 780 RAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRL 839
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAK+GII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESLI F KPK+
Sbjct: 840 NVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKL 899
Query: 954 FKKNNM 959
N+
Sbjct: 900 VNSMNI 905
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 1426 bits (3692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/966 (71%), Positives = 796/966 (82%), Gaps = 68/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQV 59
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS SQ+Q +Q+++
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLPGADTQPTQYDYRDFTMPSNSQSQTQN----DQLEM 55
Query: 60 NGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN 117
+ +++ +S+ L ++ L +LQFEEE+D+ + KELPPHACKYCGIHDPA V+MCN
Sbjct: 56 HSRRSAGDSHPRLASITNDLADLQFEEEDDEPGSSYVKELPPHACKYCGIHDPATVVMCN 115
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
C+KWFCNGRG TSGSHIINHLVRAKH+EVTLH +GPLGET+LECY+CGVRN+FVLGFIP
Sbjct: 116 NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGFIP 175
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL+WLVK P+EQ Q R RQ++
Sbjct: 176 AKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQIS 235
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+AQI KLEE+WKDN EATFQDLEKPG+D +P
Sbjct: 236 AAQINKLEELWKDNIEATFQDLEKPGIDSEP----------------------------- 266
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
+V +R++ DGYQY+ FGPLV+LEA+YD++LKES
Sbjct: 267 --------AHVLLRYE------------------DGYQYEKTFGPLVRLEAEYDQKLKES 300
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKI 417
TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+L Y + WS +GHVIK+
Sbjct: 301 ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNPWSEIGHVIKV 360
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
PDNFGD+VGLELKSS AP + T+ F+VDFIWK TSFDRM ALRKFA+D SVS +IY
Sbjct: 361 PDNFGDDVGLELKSSTSAPVKCTSNFTVDFIWKCTSFDRMTRALRKFAIDRNSVSNFIYS 420
Query: 478 RLLGH----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
RLLGH + DEVLFR PK FSAP+LPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 421 RLLGHGRANSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKT 480
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVK G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSPVSFL
Sbjct: 481 VTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFL 540
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR LK+ +E LL+ ADVICCTCVG
Sbjct: 541 ALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRSLKRASENQLLEAADVICCTCVG 600
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGD RL ++KF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 601 AGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 660
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+DFPW
Sbjct: 661 LSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KLDFPW 719
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITPYEGQ
Sbjct: 720 PQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQ 779
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLNDPRRL
Sbjct: 780 RAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRL 839
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAK+GII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESLI F KPK+
Sbjct: 840 NVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKL 899
Query: 954 FKKNNM 959
N+
Sbjct: 900 VNSMNI 905
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 1420 bits (3677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/960 (72%), Positives = 796/960 (82%), Gaps = 64/960 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ-IQV 59
MSVDA+ +S +LTF+DTEE +G D+QGS+FDF DFTLPSQSQTQASQ D + QV
Sbjct: 1 MSVDAFDGTSGSLTFVDTEENFFVGADSQGSDFDFRDFTLPSQSQTQASQHDHLGGGSQV 60
Query: 60 NG---KQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
NG + +D S L+ ++ + ELQFEE+ED+ NK+LP HAC+YCGIH+P+ V+MC
Sbjct: 61 NGFGRRIGVDPSKLSSITSAIGELQFEEDEDEVEPVENKQLPVHACRYCGIHEPSTVVMC 120
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
NICKKWFCNGRG+TSGSHI+NHLVRAKH+EVTLH DGPLGETVLECY+C RN+F+LGFI
Sbjct: 121 NICKKWFCNGRGNTSGSHIVNHLVRAKHREVTLHSDGPLGETVLECYSCATRNVFLLGFI 180
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PA++DSVVVLLCR PCAAQNS+KDMNWDQEQWKPLIADR FL WLVKVP++QEQ R RQV
Sbjct: 181 PARSDSVVVLLCRQPCAAQNSIKDMNWDQEQWKPLIADRCFLFWLVKVPSDQEQMRARQV 240
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
++AQI KLEE+WK+N +AT +Q++ P +
Sbjct: 241 SAAQINKLEELWKENVDAT-------------------------FQDLEKPGID------ 269
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
KE Q V +R+ DGYQYQN FGPL+KLEADYD++LKE
Sbjct: 270 ---KEPQP---VQLRYV------------------DGYQYQNTFGPLIKLEADYDEKLKE 305
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIK 416
SQTQEN+ +RWD GLNKK+IAYF+LAK DGDM+LM GDELKLRY + K WS LGHVIK
Sbjct: 306 SQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELKLRYVGELHKPWSCLGHVIK 365
Query: 417 IPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
+PDN+GD+VGLELK + AP E T F+VDFIWK TSF+RMQ ALRKFA+D +SVS YIY
Sbjct: 366 VPDNYGDDVGLELKHNHQAPVECTVNFAVDFIWKGTSFERMQQALRKFAMDAKSVSNYIY 425
Query: 477 HRLLGH----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 532
RLLG+ +EVLFR LPKHFSAPNLPDLNRSQVYAV+HA+QRPLSLIQGPPGTGK
Sbjct: 426 SRLLGNVRADGNEEVLFRFTLPKHFSAPNLPDLNRSQVYAVRHALQRPLSLIQGPPGTGK 485
Query: 533 TVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSF 592
TVTSATIVYQL K P+LVCAPSN AVDQLTEKIHRT LKVVRVCA+SREAIDSPVS+
Sbjct: 486 TVTSATIVYQLAKLNSGPILVCAPSNTAVDQLTEKIHRTNLKVVRVCARSREAIDSPVSY 545
Query: 593 LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
LALHNQIRNM N+ELKKL QLK+ETGELS +DE+RYR LKK AE+ LL+ ADVICCTCV
Sbjct: 546 LALHNQIRNMAQNTELKKLQQLKDETGELSLSDERRYRSLKKQAERELLEAADVICCTCV 605
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGD RL ++KF+SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+A
Sbjct: 606 GAGDLRLQRLKFNSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA 665
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GLSQSLFERLV LGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCADERKL K+DFP
Sbjct: 666 GLSQSLFERLVALGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCADERKL-KVDFP 724
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP PD PM F VTQGQEEIAGSGTSY+NRTEASNVEKITTRF++ G+KPEQIG+ITPYEG
Sbjct: 725 WPSPDCPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGIKPEQIGIITPYEG 784
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QRA+LVQ+MQYQGSL +K+YQEIE+ASVDAFQGREKD+IIMSCVR+N+HQGIGFLNDPRR
Sbjct: 785 QRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRANEHQGIGFLNDPRR 844
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
LNVALTRAKYGII++GNPKVLSKQ LWN+LLNFYK++KVLVEG LNNLKES+I F+KPK+
Sbjct: 845 LNVALTRAKYGIIIVGNPKVLSKQELWNHLLNFYKDKKVLVEGSLNNLKESMIQFTKPKK 904
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/966 (71%), Positives = 789/966 (81%), Gaps = 68/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPS--QSQTQASQLDSVNQI 57
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS QSQTQ QL+ +
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLPGADTQPTQYDYRDFTMPSTSQSQTQNDQLEIAQRC 59
Query: 58 QVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN 117
+ L ++ L +LQFEEE+D+ + KELPPHACKYCGIHDPA V+MCN
Sbjct: 60 SAGD----SHPRLASITNDLADLQFEEEDDEPGSSYVKELPPHACKYCGIHDPATVVMCN 115
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
C+KWFCNGRG TSGSHIINHLVRAKH+EVTLH +GPLGET+LECY+CGVRN+FVLGFIP
Sbjct: 116 NCRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGFIP 175
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL+WLVK P+EQ Q R RQ++
Sbjct: 176 AKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQIS 235
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+AQI KLEE+WK+N EATFQDLEKPG+D +P
Sbjct: 236 AAQINKLEELWKENIEATFQDLEKPGIDSEP----------------------------- 266
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
+V +R++ DGYQY+ FGPLV+LEA+YD++LKES
Sbjct: 267 --------AHVLLRYE------------------DGYQYEKTFGPLVRLEAEYDQKLKES 300
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKI 417
TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+L Y + WS +GHVIK+
Sbjct: 301 ATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNPWSEIGHVIKV 360
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
PDNFGD+VGLELKSS AP + T+ F+VDFIWK TSFDRM AL KFA+D SVS +IY
Sbjct: 361 PDNFGDDVGLELKSSTNAPVKCTSNFTVDFIWKCTSFDRMTRALCKFAIDRNSVSNFIYS 420
Query: 478 RLLGH----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
RLLGH + DEVLFR PK FSAP+LPDLNRSQVYAVKHA+QRPLSLIQGPPGTGKT
Sbjct: 421 RLLGHGRADSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKT 480
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVK G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSPVSFL
Sbjct: 481 VTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFL 540
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR LK+ AE LL+ ADVICCTCVG
Sbjct: 541 ALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRNLKRAAENQLLEAADVICCTCVG 600
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
AGD RL ++KF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAG
Sbjct: 601 AGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAG 660
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+DFPW
Sbjct: 661 LSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KLDFPW 719
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITPYEGQ
Sbjct: 720 PQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQ 779
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLNDPRRL
Sbjct: 780 RAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRL 839
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAK+GII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESLI F KPK+
Sbjct: 840 NVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKL 899
Query: 954 FKKNNM 959
N+
Sbjct: 900 VNSMNI 905
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 1417 bits (3668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/979 (69%), Positives = 781/979 (79%), Gaps = 79/979 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ---- 56
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT L V
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGALGIVAGGPGV 60
Query: 57 -----------IQVNGKQNL------DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPP 99
IQVNG + DNS + SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 AGVGGPPGQLDIQVNGPDGILQNGAVDNS-VAKTSQLLAELNFEEDEEDA--YYTKDLPV 117
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETV
Sbjct: 118 HACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETV 177
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLS
Sbjct: 178 LECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLS 237
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
WLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 238 WLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----------- 286
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
++V +R++ D YQYQNI
Sbjct: 287 --------------------------QHVLLRYE------------------DAYQYQNI 302
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLR 399
FGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LR
Sbjct: 303 FGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLR 362
Query: 400 YSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQL 459
Y D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ
Sbjct: 363 YKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQS 422
Query: 460 ALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR 519
AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QR
Sbjct: 423 ALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQR 482
Query: 520 PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC 579
PLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+C
Sbjct: 483 PLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLC 542
Query: 580 AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
AKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+
Sbjct: 543 AKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERE 602
Query: 640 LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQ
Sbjct: 603 LLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQ 662
Query: 700 LGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGV 759
LGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV
Sbjct: 663 LGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGV 722
Query: 760 CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGM 819
A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G
Sbjct: 723 TAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGA 782
Query: 820 KPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN 879
KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N
Sbjct: 783 KPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRAN 842
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN 939
+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNN
Sbjct: 843 EHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNN 902
Query: 940 LKESLILFSKPKQYFKKNN 958
L+ESL+ FSKP++ N
Sbjct: 903 LRESLMQFSKPRKLVNTIN 921
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 1417 bits (3667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 703/975 (72%), Positives = 792/975 (81%), Gaps = 78/975 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPS--QSQTQASQLDSVNQI 57
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS QSQTQ QLD ++
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLRGADTQPTQYDYRDFTMPSTSQSQTQGDQLDLQRRV 59
Query: 58 QVNGKQNLDNSNLNLVSQKLHELQFEEEEDDG---------NEFFNKELPPHACKYCGIH 108
V+ N + L ++ L +LQFEEE+D+G N + KELP HACKYCGIH
Sbjct: 60 SVH---NDIHPRLGSITNDLADLQFEEEDDEGGGGGIGGGGNMAYVKELPAHACKYCGIH 116
Query: 109 DPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVR 168
DPA V+MCN CKKWFCNGRG TSGSHIINHLVRAKH+EVTLH DGPLGET+LECY+CGVR
Sbjct: 117 DPATVVMCNNCKKWFCNGRGSTSGSHIINHLVRAKHREVTLHGDGPLGETILECYSCGVR 176
Query: 169 NIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQ 228
N+FVLGFIPAKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL WLVK PTEQ
Sbjct: 177 NVFVLGFIPAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLPWLVKQPTEQ 236
Query: 229 EQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPL 288
Q R RQ+++AQI KLEE+WKDN EATFQDLEKPG+D +P
Sbjct: 237 GQLRARQISAAQINKLEELWKDNIEATFQDLEKPGIDSEP-------------------- 276
Query: 289 VKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEA 348
+V +R++ DGYQY+ FGPLV+LEA
Sbjct: 277 -----------------AHVLLRYE------------------DGYQYEKTFGPLVRLEA 301
Query: 349 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTW 408
DYDK+LKES TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+LRY + W
Sbjct: 302 DYDKKLKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYNPW 361
Query: 409 SGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDD 468
+ +GHVIK+PDNFGD+VGLELK S AP + T+ FSVDFIWK TSFDRM ALR FA+D
Sbjct: 362 NEIGHVIKVPDNFGDDVGLELKCSTNAPVKCTSNFSVDFIWKCTSFDRMTRALRNFAMDR 421
Query: 469 QSVSAYIYHRLLGHN----VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 524
SVS YIY RLLGH DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLI
Sbjct: 422 NSVSNYIYSRLLGHGRADGSDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLI 481
Query: 525 QGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSRE 584
QGPPGTGKTVTSATIVYQLVKQ VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSRE
Sbjct: 482 QGPPGTGKTVTSATIVYQLVKQHAGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSRE 541
Query: 585 AIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNA 644
AIDSPVSFLALHNQIRNME NSELKKL QLK+ETGELSSADEKRYR LK+ E LL+ A
Sbjct: 542 AIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRSLKRGTENQLLEAA 601
Query: 645 DVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV 704
DVICCTCVGAGD RL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVV
Sbjct: 602 DVICCTCVGAGDVRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVV 661
Query: 705 MCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
MCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R
Sbjct: 662 MCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR 721
Query: 765 KLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
+L K+DFPWP P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQI
Sbjct: 722 RL-KLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQI 780
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+ITPYEGQRA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGI
Sbjct: 781 GIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGI 840
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL 944
GFLNDPRRLNVALTRAKYGII++GNPKVL+KQ LWN+LLNFYK++KVLVEG LNNLKESL
Sbjct: 841 GFLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESL 900
Query: 945 ILFSKPKQYFKKNNM 959
I F KPK+ NNM
Sbjct: 901 IHFQKPKKLV--NNM 913
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 1414 bits (3660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/967 (71%), Positives = 787/967 (81%), Gaps = 65/967 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQI-- 57
MSVD Y PSS L+FLD +E +L+ G DTQ +++D+ DFT+PS +Q Q +
Sbjct: 1 MSVDTYAPSS-ALSFLDMDENELLRGADTQPTQYDYRDFTMPSSTQGDDQQQTQPQPVER 59
Query: 58 QVNGKQNLDNSNLNLVSQKLHELQFEEEEDD-GNEFFNKELPPHACKYCGIHDPAYVIMC 116
Q+ G + L ++Q L +LQFEEE+D+ G+ + KELP HACKYCGIHDPA V+MC
Sbjct: 60 QIRGPVGGSHPRLASITQDLADLQFEEEDDEVGSSSYVKELPAHACKYCGIHDPATVVMC 119
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
N CKKWFCNGRG TSGSHI+NHLVRAKH+EVTLH DGPLGET+LECY+CGVRN+FVLGFI
Sbjct: 120 NNCKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHGDGPLGETILECYSCGVRNVFVLGFI 179
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAKADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL WLVK P+EQ Q R RQ+
Sbjct: 180 PAKADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLPWLVKQPSEQGQLRARQI 239
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
++AQI KLEE+WK+N EATFQDLEKPG D +P Q
Sbjct: 240 SAAQINKLEELWKENIEATFQDLEKPGNDCEPAQ-------------------------- 273
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
V +R++ DGYQY+ FGPLV+LEADYDK+LKE
Sbjct: 274 -----------VLLRYE------------------DGYQYEKTFGPLVRLEADYDKKLKE 304
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIK 416
S TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM GDEL+LRY + WS GHVIK
Sbjct: 305 SATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELYHPWSETGHVIK 364
Query: 417 IPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
+PDNFGD+VGLE+K+S+ AP + T+ FSVDFIWK TSFDRM ALR FA+D SVS YIY
Sbjct: 365 VPDNFGDDVGLEMKTSSNAPVKCTSHFSVDFIWKCTSFDRMARALRIFAMDRNSVSNYIY 424
Query: 477 HRLLGHN----VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 532
RLLGH DEVLFR PK +SAP+LP+LNRSQVYAVKHA+QRPLSLIQGPPGTGK
Sbjct: 425 SRLLGHGRPDGTDEVLFRGPQPKLYSAPHLPELNRSQVYAVKHALQRPLSLIQGPPGTGK 484
Query: 533 TVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSF 592
TVTSATIVYQLVKQ G VLVCAPSN AVDQLTEKIHRT LKVVRVCAKSREAIDSPVSF
Sbjct: 485 TVTSATIVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSF 544
Query: 593 LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
LALHNQI N++ N+ELKKL QLK+ETGELSSADEKRYR LK++ E LL+ ADVICCTCV
Sbjct: 545 LALHNQISNIKANTELKKLQQLKDETGELSSADEKRYRSLKRSTENQLLEAADVICCTCV 604
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGD RL +IKF SILIDESMQ+TEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARA
Sbjct: 605 GAGDGRLSRIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARA 664
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GLSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPSNFFYEGSLQNGVCA++R+L K+DFP
Sbjct: 665 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRRL-KLDFP 723
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP P++PM F VTQGQEEIAGSGTS++NRTEA+NVEKITTRF++ G+KPEQIG+ITPYEG
Sbjct: 724 WPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGVKPEQIGIITPYEG 783
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QRA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGREKD+IIMSCVRSN+ QGIGFLNDPRR
Sbjct: 784 QRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRR 843
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
LNVALTRAKYGII++GNPKVLSKQ LWN+LLNFYK++KVLVEG LNNLKES+I F KPK+
Sbjct: 844 LNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDRKVLVEGSLNNLKESMIHFQKPKK 903
Query: 953 YFKKNNM 959
NM
Sbjct: 904 LVNNLNM 910
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 1411 bits (3653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/985 (69%), Positives = 782/985 (79%), Gaps = 89/985 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGSGAGGAG 60
Query: 50 ----------QLDSVNQIQVNGKQNL------DNSNLNLVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV G + + D+S + SQ L EL FEE+E+D ++
Sbjct: 61 GPGGAGAVAGQLDA----QVGGPEGILQNGAVDDS-VAKTSQLLAELNFEEDEED--TYY 113
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 114 TKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 173
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 174 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 233
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 234 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 288
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 289 --------------------------------QHVLLRYE------------------DA 298
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 299 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 358
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 359 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 418
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 419 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV 478
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 479 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL 538
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 539 KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 598
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 599 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 658
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 659 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 718
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 719 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 778
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 779 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 838
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLV
Sbjct: 839 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 898
Query: 934 EGPLNNLKESLILFSKPKQYFKKNN 958
EGPLNNL+ESL+ FSKP++ N
Sbjct: 899 EGPLNNLRESLMQFSKPRKLVNTIN 923
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 1411 bits (3653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/966 (70%), Positives = 780/966 (80%), Gaps = 69/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQA---SQLDSVNQI 57
MSV+AYGPSSQTLTFLDTEET+L+G DTQGSE+DFTDFTLPSQ+QTQ SQLD+
Sbjct: 1 MSVEAYGPSSQTLTFLDTEETELLGADTQGSEYDFTDFTLPSQTQTQGHTQSQLDN---- 56
Query: 58 QVNGKQN-LDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAY 112
Q+NG + L N ++ SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA
Sbjct: 57 QLNGPDDGLHNGGMDDSVAKASQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPAC 114
Query: 113 VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFV 172
V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+
Sbjct: 115 VVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFL 174
Query: 173 LGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQR 232
LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R
Sbjct: 175 LGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLR 234
Query: 233 GRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLE 292
RQ+T+ QI KLEE+WKDN AT +DLEKPGVDE+P
Sbjct: 235 ARQITAQQINKLEELWKDNPCATLEDLEKPGVDEEP------------------------ 270
Query: 293 ADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDK 352
++V +R++ D YQYQNIFGPLVKLEADYDK
Sbjct: 271 -------------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDK 299
Query: 353 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLG 412
+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+G
Sbjct: 300 KLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIG 359
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVS 472
HVIK+PDN+GDE+ +EL++S GAP E + VDF+WKSTSFDRMQ AL+ FAVD+ SVS
Sbjct: 360 HVIKVPDNYGDEIAIELRTSVGAPVEIPHNYQVDFVWKSTSFDRMQSALKTFAVDETSVS 419
Query: 473 AYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 532
YIYH+LLGH V++V +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGK
Sbjct: 420 GYIYHKLLGHEVEDVTIKCQLPKRFTANGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 479
Query: 533 TVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSF 592
TVTSATIVY L +Q PVLVCAPSNIAVDQLTEKI +TGLKVVR+CAKSREAI+SPVSF
Sbjct: 480 TVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSF 539
Query: 593 LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
LALHNQI NM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCV
Sbjct: 540 LALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCV 599
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+A
Sbjct: 600 GAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA 659
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF
Sbjct: 660 GLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDFQ 719
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP P+KPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYEG
Sbjct: 720 WPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEG 779
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QR++LVQ+MQ+ GSL K+YQ++E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRR
Sbjct: 780 QRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRR 839
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
LNVALTRAKYG+I++GNPK LSKQPLWNNLLN YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 840 LNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRK 899
Query: 953 YFKKNN 958
N
Sbjct: 900 LVNTIN 905
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 1411 bits (3652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/984 (69%), Positives = 782/984 (79%), Gaps = 88/984 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGGGAGAPV 60
Query: 50 ---------QLDSVNQIQVNGKQNL------DNSNLNLVSQKLHELQFEEEEDDGNEFFN 94
QLD+ QV G + + D+S + SQ L EL FEE+E+D ++
Sbjct: 61 GAGPGAAAGQLDA----QVGGPEGILQNGAVDDS-VAKTSQLLAELNFEEDEED--TYYT 113
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGP
Sbjct: 114 KDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGP 173
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI D
Sbjct: 174 LGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQD 233
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLR 274
R FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 234 RCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP------ 287
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
++V +R++ D Y
Sbjct: 288 -------------------------------QHVLLRYE------------------DAY 298
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGD 394
QYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGD
Sbjct: 299 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGD 358
Query: 395 ELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSF 454
E+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSF
Sbjct: 359 EICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSF 418
Query: 455 DRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK 514
DRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK
Sbjct: 419 DRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVK 478
Query: 515 HAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLK
Sbjct: 479 TVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLK 538
Query: 575 VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKK 634
VVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+
Sbjct: 539 VVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKR 598
Query: 635 NAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILV 694
AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILV
Sbjct: 599 TAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILV 658
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
GDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGS
Sbjct: 659 GDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGS 718
Query: 755 LQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF 814
LQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 719 LQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKL 778
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+S
Sbjct: 779 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 838
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
CVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVE
Sbjct: 839 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVE 898
Query: 935 GPLNNLKESLILFSKPKQYFKKNN 958
GPLNNL+ESL+ FSKP++ N
Sbjct: 899 GPLNNLRESLMQFSKPRKLVNTIN 922
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 1410 bits (3649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/987 (68%), Positives = 782/987 (79%), Gaps = 91/987 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNL------DNSNLNLVSQKLHELQFEEEEDDGNE 91
QLD+ QV G + + D+S + SQ L EL FEE+E+D
Sbjct: 61 GPVGAGAGAAAGQLDA----QVGGPEGILQNGAVDDS-VAKTSQLLAELNFEEDEED--T 113
Query: 92 FFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHK 151
++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHK
Sbjct: 114 YYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHK 173
Query: 152 DGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPL 211
DGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PL
Sbjct: 174 DGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPL 233
Query: 212 IADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQV 271
I DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 234 IQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP--- 290
Query: 272 LLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG 331
++V +R++
Sbjct: 291 ----------------------------------QHVLLRYE------------------ 298
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLM
Sbjct: 299 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLM 358
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
QGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKS
Sbjct: 359 QGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKS 418
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
TSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVY
Sbjct: 419 TSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVY 478
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT 571
AVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+T
Sbjct: 479 AVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQT 538
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM 631
GLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR
Sbjct: 539 GLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRA 598
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQL
Sbjct: 599 LKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQL 658
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FY
Sbjct: 659 ILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFY 718
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKIT
Sbjct: 719 EGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKIT 778
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD I
Sbjct: 779 TKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFI 838
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
I+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKV
Sbjct: 839 ILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKV 898
Query: 932 LVEGPLNNLKESLILFSKPKQYFKKNN 958
LVEGPLNNL+ESL+ FSKP++ N
Sbjct: 899 LVEGPLNNLRESLMQFSKPRKLVNTIN 925
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 1409 bits (3647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/985 (69%), Positives = 780/985 (79%), Gaps = 88/985 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 GPGGAGAGAAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 114
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 289
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 290 --------------------------------QHVLLRYE------------------DA 299
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 300 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 359
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 360 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 419
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 420 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV 479
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 480 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL 539
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 540 KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 599
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 600 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 659
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 660 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 719
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 720 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 779
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 780 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 839
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLV
Sbjct: 840 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 899
Query: 934 EGPLNNLKESLILFSKPKQYFKKNN 958
EGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EGPLNNLRESLMQFSKPRKLVNTIN 924
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 1409 bits (3647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/985 (69%), Positives = 780/985 (79%), Gaps = 88/985 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 GPGGAGAGAAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 114
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 289
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 290 --------------------------------QHVLLRYE------------------DA 299
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 300 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 359
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 360 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 419
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 420 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV 479
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 480 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL 539
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 540 KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 599
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 600 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 659
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 660 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 719
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 720 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 779
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 780 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 839
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLV
Sbjct: 840 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 899
Query: 934 EGPLNNLKESLILFSKPKQYFKKNN 958
EGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EGPLNNLRESLMQFSKPRKLVNTIN 924
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 1409 bits (3647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/985 (69%), Positives = 780/985 (79%), Gaps = 88/985 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 GPGGAGAGAAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 114
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 289
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 290 --------------------------------QHVLLRYE------------------DA 299
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 300 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 359
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 360 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 419
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 420 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV 479
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 480 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL 539
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 540 KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 599
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 600 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 659
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 660 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 719
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 720 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 779
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 780 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 839
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLV
Sbjct: 840 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 899
Query: 934 EGPLNNLKESLILFSKPKQYFKKNN 958
EGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EGPLNNLRESLMQFSKPRKLVNTIN 924
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 1409 bits (3646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/985 (69%), Positives = 780/985 (79%), Gaps = 88/985 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 SPGGAGAGAAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 114
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 289
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 290 --------------------------------QHVLLRYE------------------DA 299
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 300 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 359
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 360 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 419
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 420 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVITKCQLPKRFTAQGLPDLNHSQVYAV 479
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 480 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL 539
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 540 KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 599
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 600 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 659
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 660 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 719
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 720 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 779
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 780 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 839
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLV
Sbjct: 840 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 899
Query: 934 EGPLNNLKESLILFSKPKQYFKKNN 958
EGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EGPLNNLRESLMQFSKPRKLVNTIN 924
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 1408 bits (3645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/964 (70%), Positives = 779/964 (80%), Gaps = 67/964 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQ-LDSVNQIQV 59
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+Q Q+ LD QV
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQGQSQSQLDG----QV 56
Query: 60 NGKQNL-----DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVI 114
NG + + + SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+
Sbjct: 57 NGPDGMLQNGTVDDGVGKTSQLLGELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVV 114
Query: 115 MCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLG 174
CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LG
Sbjct: 115 YCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLG 174
Query: 175 FIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGR 234
FIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R R
Sbjct: 175 FIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRAR 234
Query: 235 QVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEAD 294
Q+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 QITAQQINKLEELWKENPSATLEDLEKPGVDEEP-------------------------- 268
Query: 295 YDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRL 354
++V +R++ D YQYQNIFGPLVKLEADYDK+L
Sbjct: 269 -----------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKL 299
Query: 355 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHV 414
KESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHV
Sbjct: 300 KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHV 359
Query: 415 IKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAY 474
IK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS Y
Sbjct: 360 IKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGY 419
Query: 475 IYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTV 534
IYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTV
Sbjct: 420 IYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTV 479
Query: 535 TSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLA 594
TSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLA
Sbjct: 480 TSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLA 539
Query: 595 LHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LHNQIRNME EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGA
Sbjct: 540 LHNQIRNMESMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGA 599
Query: 655 GDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
GDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGL
Sbjct: 600 GDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGL 659
Query: 715 SQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
SQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP
Sbjct: 660 SQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWP 719
Query: 775 VPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQR 834
PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR
Sbjct: 720 QPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQR 779
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLN
Sbjct: 780 SYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLN 839
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYF 954
VALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 840 VALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLV 899
Query: 955 KKNN 958
N
Sbjct: 900 NTIN 903
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 1408 bits (3644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/999 (68%), Positives = 781/999 (78%), Gaps = 102/999 (10%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQA------------ 48
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGGSGSGGSVAA 60
Query: 49 ------------------------SQLDSVNQIQVNGKQNL-----DNSNLNLVSQKLHE 79
QLD+ QVNG + + N+ SQ L E
Sbjct: 61 PGTPGLPGGGVGPGAGGPPSVVVPGQLDA----QVNGPDGILQNGAVDDNVPKTSQLLAE 116
Query: 80 LQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHL 139
L FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHL
Sbjct: 117 LNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHL 174
Query: 140 VRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLK 199
VRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLK
Sbjct: 175 VRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLK 234
Query: 200 DMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDL 259
D+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DL
Sbjct: 235 DINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDL 294
Query: 260 EKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKK 319
EKPGVDE+P ++V +R++
Sbjct: 295 EKPGVDEEP-------------------------------------QHVLLRYE------ 311
Query: 320 SIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 379
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF
Sbjct: 312 ------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYF 359
Query: 380 SLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEA 439
+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E
Sbjct: 360 TLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEV 419
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A
Sbjct: 420 THNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTA 479
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNI
Sbjct: 480 QGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNI 539
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETG
Sbjct: 540 AVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETG 599
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPE
Sbjct: 600 ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPE 659
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
CMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMH
Sbjct: 660 CMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMH 719
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+
Sbjct: 720 PALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYL 779
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+AS
Sbjct: 780 NRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIAS 839
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLW
Sbjct: 840 VDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLW 899
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
N+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 900 NHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 938
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 1407 bits (3643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/980 (69%), Positives = 779/980 (79%), Gaps = 83/980 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPGGP 60
Query: 50 -------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELP 98
QLD+ QV + L N ++ SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 GAGGAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYYTKDLP 114
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 115 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 174
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 175 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 234
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 284
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 285 ---------------------------QHVLLRYE------------------DAYQYQN 299
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD DMRLMQGDE+ L
Sbjct: 300 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICL 359
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
RY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ
Sbjct: 360 RYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQ 419
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +Q
Sbjct: 420 SALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQ 479
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+
Sbjct: 480 RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRL 539
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+
Sbjct: 540 CAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAER 599
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHC
Sbjct: 600 ELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHC 659
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNG
Sbjct: 660 QLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNG 719
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G
Sbjct: 720 VTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAG 779
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+
Sbjct: 780 AKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA 839
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YKEQK LVEGPLN
Sbjct: 840 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLN 899
Query: 939 NLKESLILFSKPKQYFKKNN 958
NL+ESL+ FSKP++ N
Sbjct: 900 NLRESLMQFSKPRKLVNTVN 919
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 1113
Score = 1407 bits (3643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/980 (69%), Positives = 779/980 (79%), Gaps = 83/980 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPGGA 60
Query: 50 -------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELP 98
QLD+ QV + L N ++ SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 GAGGAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYYTKDLP 114
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 115 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 174
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 175 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 234
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 284
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 285 ---------------------------QHVLLRYE------------------DAYQYQN 299
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD DMRLMQGDE+ L
Sbjct: 300 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICL 359
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
RY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ
Sbjct: 360 RYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQ 419
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +Q
Sbjct: 420 SALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQ 479
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+
Sbjct: 480 RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRL 539
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+
Sbjct: 540 CAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAER 599
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHC
Sbjct: 600 ELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHC 659
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNG
Sbjct: 660 QLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNG 719
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G
Sbjct: 720 VTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAG 779
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+
Sbjct: 780 AKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA 839
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YKEQK LVEGPLN
Sbjct: 840 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLN 899
Query: 939 NLKESLILFSKPKQYFKKNN 958
NL+ESL+ FSKP++ N
Sbjct: 900 NLRESLMQFSKPRKLVNTVN 919
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 1407 bits (3643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/980 (69%), Positives = 779/980 (79%), Gaps = 83/980 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPGGA 60
Query: 50 -------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELP 98
QLD+ QV + L N ++ SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 GAGGAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYYTKDLP 114
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 115 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 174
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 175 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 234
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 284
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 285 ---------------------------QHVLLRYE------------------DAYQYQN 299
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD DMRLMQGDE+ L
Sbjct: 300 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICL 359
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
RY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ
Sbjct: 360 RYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQ 419
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +Q
Sbjct: 420 SALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQ 479
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+
Sbjct: 480 RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRL 539
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+
Sbjct: 540 CAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAER 599
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHC
Sbjct: 600 ELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHC 659
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNG
Sbjct: 660 QLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNG 719
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G
Sbjct: 720 VTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAG 779
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+
Sbjct: 780 AKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA 839
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YKEQK LVEGPLN
Sbjct: 840 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLN 899
Query: 939 NLKESLILFSKPKQYFKKNN 958
NL+ESL+ FSKP++ N
Sbjct: 900 NLRESLMQFSKPRKLVNTVN 919
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 1405 bits (3638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/990 (68%), Positives = 780/990 (78%), Gaps = 94/990 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYG SSQTLTFLDTEE +L+G D QGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGLSSQTLTFLDTEEAELLGADXQGSEFEFTDFTLPSQTQTPPGGPGGGGGGGGS 60
Query: 50 ---------------QLDSVNQIQVNGKQNL------DNSNLNLVSQKLHELQFEEEEDD 88
QLD+ QVNG + D+S + SQ L EL FEE+E+D
Sbjct: 61 GAGGPGAAGVGGTAGQLDA----QVNGPDGILQNGAVDDS-VAKTSQLLAELNFEEDEED 115
Query: 89 GNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVT 148
++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVT
Sbjct: 116 --TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVT 173
Query: 149 LHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQW 208
LHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW
Sbjct: 174 LHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQW 233
Query: 209 KPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDP 268
+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 234 QPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP 293
Query: 269 HQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 328
++V +R++
Sbjct: 294 -------------------------------------QHVLLRYE--------------- 301
Query: 329 TDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDM 388
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DM
Sbjct: 302 ---DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDM 358
Query: 389 RLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFI 448
RLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+
Sbjct: 359 RLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFV 418
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 508
WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN S
Sbjct: 419 WKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHS 478
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
QVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKI
Sbjct: 479 QVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKI 538
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR 628
H+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKR
Sbjct: 539 HQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKR 598
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
YR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGA
Sbjct: 599 YRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGA 658
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
KQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN
Sbjct: 659 KQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSN 718
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVE
Sbjct: 719 IFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVE 778
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
KITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREK
Sbjct: 779 KITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREK 838
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKE
Sbjct: 839 DFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKE 898
Query: 929 QKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
QKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 899 QKVLVEGPLNNLRESLMQFSKPRKLVNTIN 928
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 1405 bits (3637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/985 (68%), Positives = 775/985 (78%), Gaps = 84/985 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQ---- 56
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGDLAQ 60
Query: 57 -------------------IQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
V K L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 CGRGQRGAQAGCMVLGYVPAHVCTKGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 118
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 119 TKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 178
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 179 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 238
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 239 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 293
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 294 --------------------------------QHVLLRYE------------------DA 303
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 304 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 363
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 364 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 423
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 424 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV 483
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 484 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL 543
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 544 KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 603
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 604 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 663
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 664 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 723
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 724 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 783
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 784 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 843
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLV
Sbjct: 844 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 903
Query: 934 EGPLNNLKESLILFSKPKQYFKKNN 958
EGPLNNL+ESL+ FSKP++ N
Sbjct: 904 EGPLNNLRESLMQFSKPRKLVNTIN 928
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 1405 bits (3637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/985 (68%), Positives = 778/985 (78%), Gaps = 88/985 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 GPGGAGAGAAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 114
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 289
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 290 --------------------------------QHVLLRYE------------------DA 299
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 300 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 359
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 360 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 419
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 420 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQALPDLNHSQVYAV 479
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 480 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQDNGPVLVCAPSNIAVDQLTEKIHQTGL 539
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+C KSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 540 KVVRLCPKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 599
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 600 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 659
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 660 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 719
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 720 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 779
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 780 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 839
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL FYKEQKVLV
Sbjct: 840 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLIFYKEQKVLV 899
Query: 934 EGPLNNLKESLILFSKPKQYFKKNN 958
EGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EGPLNNLRESLMQFSKPRKLVNTIN 924
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 1405 bits (3636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/961 (70%), Positives = 783/961 (81%), Gaps = 68/961 (7%)
Query: 3 VDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGK 62
+D +GPSSQTLTF D + I DTQGS+FDFTDFT+PSQSQ S + ++ +
Sbjct: 1 MDNFGPSSQTLTFFDDVAGE-IAADTQGSQFDFTDFTVPSQSQQSQLDSKSQVSLTLSAE 59
Query: 63 QNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKW 122
++L + L EL FE+E++D E +ELP HACKYCGIHDP V+ CNICKKW
Sbjct: 60 EDLVRT-----CGALAELNFEDEQEDAVE--PRELPQHACKYCGIHDPGCVMQCNICKKW 112
Query: 123 FCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADS 182
FCNGRG TSGSH++NHLVRAKH+EVTLH+DGPLGETVLECYTCG RN+FVLGFIPAKADS
Sbjct: 113 FCNGRGSTSGSHMVNHLVRAKHREVTLHRDGPLGETVLECYTCGCRNVFVLGFIPAKADS 172
Query: 183 VVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIA 242
VVVLLCR PC Q +LKDMNWD EQWKPLI DRSFL+WLVK P++ EQ+R RQ+T+ Q+
Sbjct: 173 VVVLLCRHPCGTQGTLKDMNWDPEQWKPLIHDRSFLTWLVKAPSDDEQRRARQITAQQMG 232
Query: 243 KLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES 302
KLEE+WK+N +ATFQDLE+PGVDE+P Q
Sbjct: 233 KLEELWKENVDATFQDLERPGVDEEPQQ-------------------------------- 260
Query: 303 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 362
V +R++ DGYQYQNIFGPLVK+EADYDK+LKESQTQE+
Sbjct: 261 -----VLLRYE------------------DGYQYQNIFGPLVKMEADYDKKLKESQTQED 297
Query: 363 VTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFG 422
++VRWD+GLNKK+IAYF++A++D DMRLM GDEL+LRY + K W+G+GHVIKIPDN+
Sbjct: 298 ISVRWDMGLNKKAIAYFAIARSDTDMRLMHGDELRLRYLGELHKPWTGVGHVIKIPDNYS 357
Query: 423 DEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 482
+EVG+E+K++AG P+E T F VDF+WKSTSFDRMQ ALRKFAVD+ SVSAYIYHRLLGH
Sbjct: 358 EEVGIEMKTNAGIPSECTHNFVVDFVWKSTSFDRMQAALRKFAVDEASVSAYIYHRLLGH 417
Query: 483 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQ 542
+V++++ RC LPK FSAPNLP+LNRSQVYAV+HA+QRPLSLIQGPPGTGKTVTSATIVYQ
Sbjct: 418 DVEDIVLRCQLPKQFSAPNLPELNRSQVYAVRHALQRPLSLIQGPPGTGKTVTSATIVYQ 477
Query: 543 LVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNM 602
L KQ PVLVCAPSNIAVDQLTEKIHRT LKVVR+CAKSREAI+SPVSFLALHNQ+RNM
Sbjct: 478 LAKQGHGPVLVCAPSNIAVDQLTEKIHRTRLKVVRLCAKSREAINSPVSFLALHNQVRNM 537
Query: 603 EMN-----SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
E+N SELKKL QLK+ETGELSSADEKRYR+LK+ E+ LL+ ADVICCTCVGAGDP
Sbjct: 538 EVNASQHISELKKLQQLKDETGELSSADEKRYRILKRLCERELLEAADVICCTCVGAGDP 597
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
R+L+ KFHSILIDE MQATEPECMVPV+LGAKQLILVGDHCQLGPVVMCK AARAGLSQS
Sbjct: 598 RILRFKFHSILIDECMQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKGAARAGLSQS 657
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
LFERLVVLGIRP RLEVQYRMHP LS+FPSNFFYEGSLQNGV A+ER+L +DFP+P PD
Sbjct: 658 LFERLVVLGIRPLRLEVQYRMHPSLSEFPSNFFYEGSLQNGVYAEERRLKGVDFPFPQPD 717
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
KPM FY GQEEIA SGTSY+NRTEA+ VEKI TRF++ +KPEQIGVITPYEGQRAFL
Sbjct: 718 KPMFFYCCNGQEEIAASGTSYLNRTEAALVEKIVTRFLKSSVKPEQIGVITPYEGQRAFL 777
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
VQ+MQY GSL +K+YQ+IEVASVDAFQGREKDLIIMSCVRSN+HQGIGFLNDPRRLNVAL
Sbjct: 778 VQYMQYSGSLHSKLYQDIEVASVDAFQGREKDLIIMSCVRSNEHQGIGFLNDPRRLNVAL 837
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
TRA+YGII++GNPKVLSKQPLWN+LL FYK V+VEGPL NL+E+++ ++PK+
Sbjct: 838 TRARYGIIIVGNPKVLSKQPLWNHLLAFYKNNSVVVEGPLTNLRETMLHITRPKKMMNSA 897
Query: 958 N 958
N
Sbjct: 898 N 898
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 1404 bits (3635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/962 (70%), Positives = 780/962 (81%), Gaps = 63/962 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSE+DFTDFTLPSQ+QTQ ++ QVN
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEYDFTDFTLPSQTQTQGQTQSQLDG-QVN 59
Query: 61 GK----QNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
G QN D+ + SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ C
Sbjct: 60 GPDGVLQNGDDPVVK-ASQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYC 116
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
N KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFI
Sbjct: 117 NTSKKWFCNGRGNTSGSHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFI 176
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+
Sbjct: 177 PAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQI 236
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 237 TAQQINKLEELWKENPTATLEDLEKPGVDEEP---------------------------- 268
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
++V +R++ D YQYQNIFGPLVKLEADYDK+LKE
Sbjct: 269 ---------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLKE 301
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIK 416
SQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK
Sbjct: 302 SQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPPWKGIGHVIK 361
Query: 417 IPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
+PDN+GDE+ +EL+SSAGAP E F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIY
Sbjct: 362 VPDNYGDEIAIELRSSAGAPVEIPHIFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIY 421
Query: 477 HRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTS 536
H+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTS
Sbjct: 422 HKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTS 481
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 596
ATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALH
Sbjct: 482 ATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 541
Query: 597 NQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
NQ RNM+ EL+KL QLK+ETGELSS+DEKRYR L++ AE+ LL NADVICCTCVGAGD
Sbjct: 542 NQTRNMDSMPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAGD 601
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
PRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQ
Sbjct: 602 PRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQ 661
Query: 717 SLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
SLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP P
Sbjct: 662 SLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQP 721
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
DKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYEGQR++
Sbjct: 722 DKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSY 781
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVA
Sbjct: 782 LVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 841
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 842 LTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNT 901
Query: 957 NN 958
N
Sbjct: 902 IN 903
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1100
Score = 1404 bits (3635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/962 (70%), Positives = 780/962 (81%), Gaps = 62/962 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QTQ ++ QVN
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTQGQTQSQLDN-QVN 59
Query: 61 GKQNLDNSNLNLV---SQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN 117
G + + + V SQ L EL FEE+E+D ++ K LP HAC YCGIHDPA V+ CN
Sbjct: 60 GPDGVLPNGEDAVGKTSQLLAELNFEEDEED--TYYTKVLPVHACSYCGIHDPACVVYCN 117
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIP
Sbjct: 118 TSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIP 177
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T
Sbjct: 178 AKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQIT 237
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 238 AQQINKLEELWKENPTATLEDLEKPGVDEEP----------------------------- 268
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKES 357
++V +R++ D YQYQNIFGPLVKLEADYDK+LKES
Sbjct: 269 --------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLKES 302
Query: 358 QTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIK 416
QTQ+N+TVRWD+GLNKK IAYF+L KTD GDMRLMQGDE+ LRY D + W G+GHVIK
Sbjct: 303 QTQDNITVRWDLGLNKKRIAYFTLPKTDSGDMRLMQGDEICLRYKGDMAPLWKGIGHVIK 362
Query: 417 IPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
+PDN+GDE+ +EL+SSAGAP E F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIY
Sbjct: 363 VPDNYGDEIAIELRSSAGAPVEVPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIY 422
Query: 477 HRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTS 536
H+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTS
Sbjct: 423 HKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTS 482
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 596
ATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALH
Sbjct: 483 ATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 542
Query: 597 NQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
NQIRNM+ EL+KL QLK+ETGELSS+DEKRYR LK+ AE+ LL NADVICCTCVGAGD
Sbjct: 543 NQIRNMDSMPELQKLQQLKDETGELSSSDEKRYRALKRTAERELLMNADVICCTCVGAGD 602
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
PRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQ
Sbjct: 603 PRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQ 662
Query: 717 SLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
SLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP P
Sbjct: 663 SLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRLKKGFDFQWPQP 722
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
DKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYEGQR++
Sbjct: 723 DKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSY 782
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVA
Sbjct: 783 LVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 842
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 843 LTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNT 902
Query: 957 NN 958
N
Sbjct: 903 IN 904
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 1404 bits (3634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/980 (68%), Positives = 777/980 (79%), Gaps = 83/980 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGSPGGS 60
Query: 50 -------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELP 98
QLDS QV + L N ++ SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 GAGGAAGQLDS----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYYTKDLP 114
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 115 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 174
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 175 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 234
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 284
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 285 ---------------------------QHVLLRYE------------------DAYQYQN 299
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD DMRLMQGDE+ L
Sbjct: 300 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSDMRLMQGDEICL 359
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
RY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFD+MQ
Sbjct: 360 RYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDKMQ 419
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+ FAV++ SVS YIYH+LLGH V++V +C LPK F+A LPDLN SQVYAVK +Q
Sbjct: 420 SALKTFAVEETSVSGYIYHKLLGHEVEDVFIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQ 479
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RPLS IQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+
Sbjct: 480 RPLSFIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRL 539
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+
Sbjct: 540 CAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAER 599
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHC
Sbjct: 600 ELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHC 659
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNG
Sbjct: 660 QLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNG 719
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G
Sbjct: 720 VTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAG 779
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+
Sbjct: 780 AKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRA 839
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YKEQK LVEGPLN
Sbjct: 840 NEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLN 899
Query: 939 NLKESLILFSKPKQYFKKNN 958
NL+ESL+ FSKP++ N
Sbjct: 900 NLRESLMQFSKPRKLVNTVN 919
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/962 (70%), Positives = 781/962 (81%), Gaps = 65/962 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSV+AYGPSSQTLTFLD EET+L+G DTQGSE+DFTDFTLPSQ+QTQ S + QVN
Sbjct: 1 MSVEAYGPSSQTLTFLDIEETELLGADTQGSEYDFTDFTLPSQTQTQGQ---SQLENQVN 57
Query: 61 GK----QNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
G QN +++ + SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ C
Sbjct: 58 GPDIVLQNGEDAVVK-ASQLLAELNFEEDEEDA--YYTKDLPAHACSYCGIHDPACVVYC 114
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
N KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFI
Sbjct: 115 NTSKKWFCNGRGNTSGSHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFI 174
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+
Sbjct: 175 PAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQI 234
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
T+ QI KLEE+WK+N A+ +DLEKPGVDE+P
Sbjct: 235 TAQQINKLEELWKENPCASLEDLEKPGVDEEP---------------------------- 266
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
++V +R++ D YQYQNIFGPLVKLEADYDK+LKE
Sbjct: 267 ---------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLKE 299
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIK 416
SQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK
Sbjct: 300 SQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPPWKGIGHVIK 359
Query: 417 IPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
+PDN+GDE+ +EL+SSAGAP E F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIY
Sbjct: 360 VPDNYGDEIAIELRSSAGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIY 419
Query: 477 HRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTS 536
H+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTS
Sbjct: 420 HKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTS 479
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 596
ATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALH
Sbjct: 480 ATIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 539
Query: 597 NQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
NQ RNME EL+KL QLK+ETGELSS+DEKRYR L++ AE+ LL NADVICCTCVGAGD
Sbjct: 540 NQTRNMESMPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAGD 599
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
PRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQ
Sbjct: 600 PRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQ 659
Query: 717 SLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
SLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP P
Sbjct: 660 SLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQP 719
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
DKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYEGQR++
Sbjct: 720 DKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSY 779
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVA
Sbjct: 780 LVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 839
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 840 LTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNT 899
Query: 957 NN 958
N
Sbjct: 900 IN 901
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 1402 bits (3628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/964 (70%), Positives = 778/964 (80%), Gaps = 64/964 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSE+DFTDFTLPSQ+QTQ ++ QVN
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEYDFTDFTLPSQTQTQGQTQSQLDS-QVN 59
Query: 61 G-KQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIM 115
G + L N ++ SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+
Sbjct: 60 GPDEGLHNGGVDDSVAKASQLLAELNFEEDEED--TYYTKDLPLHACSYCGIHDPACVVY 117
Query: 116 CNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGF 175
CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGF
Sbjct: 118 CNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGF 177
Query: 176 IPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQ 235
IPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ
Sbjct: 178 IPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQ 237
Query: 236 VTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADY 295
+T+ QI KLEE+WKDN AT +DLEKPGVDE+P
Sbjct: 238 ITAQQINKLEELWKDNPTATLEDLEKPGVDEEP--------------------------- 270
Query: 296 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLK 355
++V +R++ D YQYQNIFGPLVKLEADYDK+LK
Sbjct: 271 ----------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLK 302
Query: 356 ESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHV 414
ESQTQ+N+TVRWD+GLNKK IAYF+L KTD GDMRLMQGDE+ LRY D + W G+GHV
Sbjct: 303 ESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGDMRLMQGDEICLRYKGDLAPLWKGIGHV 362
Query: 415 IKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAY 474
IK+PDN+GDE+ +EL+SS GAP E F VDF+WKSTSFDRMQ AL+ FAVD+ SVS Y
Sbjct: 363 IKVPDNYGDEIAIELRSSVGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGY 422
Query: 475 IYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTV 534
IYH+LLGH V++V +C LPK F+AP LPDLN SQVYAVK +QRPLSLIQGPPGTGKTV
Sbjct: 423 IYHKLLGHEVEDVTIKCQLPKRFTAPGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTV 482
Query: 535 TSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLA 594
TSATIVY L +Q PVLVCAPSNIAVDQLTEKI +TGLKVVR+CAKSREAI+SPVSFLA
Sbjct: 483 TSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSFLA 542
Query: 595 LHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LHNQI NM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGA
Sbjct: 543 LHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGA 602
Query: 655 GDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
GDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGL
Sbjct: 603 GDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGL 662
Query: 715 SQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
SQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP
Sbjct: 663 SQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQWP 722
Query: 775 VPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQR 834
PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYEGQR
Sbjct: 723 QPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQR 782
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
++LVQ+MQ+ GSL K+YQ++E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLN
Sbjct: 783 SYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLN 842
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYF 954
VALTRAKYG+I++GNPK LSKQPLWNNLLN YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 843 VALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRKLV 902
Query: 955 KKNN 958
N
Sbjct: 903 NTIN 906
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 1402 bits (3628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/996 (68%), Positives = 780/996 (78%), Gaps = 99/996 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 23 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 82
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 83 GPGGAGAGSAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 136
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 137 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 196
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 197 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 256
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 257 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 311
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 312 --------------------------------QHVLLRYE------------------DA 321
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG------- 386
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 322 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVI 381
Query: 387 ----DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG 442
DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T
Sbjct: 382 IWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN 441
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A L
Sbjct: 442 FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGL 501
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
PDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVD
Sbjct: 502 PDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 561
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS 622
QLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELS
Sbjct: 562 QLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELS 621
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
SADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMV
Sbjct: 622 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 681
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPEL 742
PV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP L
Sbjct: 682 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 741
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRT 802
S FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRT
Sbjct: 742 SAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRT 801
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDA
Sbjct: 802 EAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDA 861
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+L
Sbjct: 862 FQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHL 921
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 922 LNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 957
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 1400 bits (3625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 678/962 (70%), Positives = 780/962 (81%), Gaps = 63/962 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSV+AYGPSSQTLTFLDTEET+L+G DTQGSE+DFTDFTLPSQ+QTQ ++ QVN
Sbjct: 1 MSVEAYGPSSQTLTFLDTEETELLGADTQGSEYDFTDFTLPSQTQTQGQTQSQLDN-QVN 59
Query: 61 GK----QNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
G QN D+ + SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ C
Sbjct: 60 GPDIVLQNGDDVVVK-ASQLLAELNFEEDEED--TYYTKDLPAHACSYCGIHDPACVVYC 116
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
N KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFI
Sbjct: 117 NTSKKWFCNGRGNTSGSHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFI 176
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+
Sbjct: 177 PAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQI 236
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
T+ QI KLEE+WK+N A+ +DLEKPGVDE+P
Sbjct: 237 TAQQINKLEELWKENPCASLEDLEKPGVDEEP---------------------------- 268
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
++V +R++ D YQYQNIFGPLVKLEADYDK+LKE
Sbjct: 269 ---------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLKE 301
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIK 416
SQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK
Sbjct: 302 SQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPPWKGIGHVIK 361
Query: 417 IPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
+PDN+GDE+ +EL+SSAGAP E F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIY
Sbjct: 362 VPDNYGDEIAIELRSSAGAPIEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIY 421
Query: 477 HRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTS 536
H+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTS
Sbjct: 422 HKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTS 481
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 596
ATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALH
Sbjct: 482 ATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALH 541
Query: 597 NQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
NQ RNME EL+KL QLK+ETGELSS+DEKRYR L++ AE+ LL NADVICCTCVGAGD
Sbjct: 542 NQTRNMESMPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAGD 601
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
PRL K++F SILIDES QATEPECMVP +LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQ
Sbjct: 602 PRLAKMQFRSILIDESTQATEPECMVPAVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQ 661
Query: 717 SLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
SLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV + +R DF WP P
Sbjct: 662 SLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTSADRVKKGFDFQWPQP 721
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
DKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYEGQR++
Sbjct: 722 DKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSY 781
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVA
Sbjct: 782 LVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVA 841
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 842 LTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNT 901
Query: 957 NN 958
N
Sbjct: 902 IN 903
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
Length = 1129
Score = 1400 bits (3623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/996 (68%), Positives = 780/996 (78%), Gaps = 99/996 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 GPGGAGAGAAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 114
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 289
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 290 --------------------------------QHVLLRYE------------------DA 299
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG------- 386
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 300 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVI 359
Query: 387 ----DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG 442
DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T
Sbjct: 360 IWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN 419
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A L
Sbjct: 420 FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGL 479
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
PDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVD
Sbjct: 480 PDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 539
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS 622
QLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELS
Sbjct: 540 QLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELS 599
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
SADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMV
Sbjct: 600 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 659
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPEL 742
PV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP L
Sbjct: 660 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 719
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRT 802
S FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRT
Sbjct: 720 SAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRT 779
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDA
Sbjct: 780 EAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDA 839
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+L
Sbjct: 840 FQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHL 899
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 900 LNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 935
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 1400 bits (3623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 680/996 (68%), Positives = 780/996 (78%), Gaps = 99/996 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 GPGGAGAGSAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 114
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 289
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 290 --------------------------------QHVLLRYE------------------DA 299
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG------- 386
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 300 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVI 359
Query: 387 ----DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG 442
DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T
Sbjct: 360 IWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN 419
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A L
Sbjct: 420 FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGL 479
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
PDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVD
Sbjct: 480 PDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVD 539
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS 622
QLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELS
Sbjct: 540 QLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELS 599
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
SADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMV
Sbjct: 600 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 659
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPEL 742
PV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP L
Sbjct: 660 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPAL 719
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRT 802
S FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRT
Sbjct: 720 SAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRT 779
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDA
Sbjct: 780 EAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDA 839
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+L
Sbjct: 840 FQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHL 899
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 900 LNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 935
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 1398 bits (3619), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/991 (68%), Positives = 779/991 (78%), Gaps = 94/991 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPGGA 60
Query: 50 -------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELP 98
QLD+ QV + L N ++ SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 GAGGAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYYTKDLP 114
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 115 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 174
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 175 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 234
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 284
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 285 ---------------------------QHVLLRYE------------------DAYQYQN 299
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-----------D 387
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD D
Sbjct: 300 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRD 359
Query: 388 MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDF 447
MRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF
Sbjct: 360 MRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDF 419
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN
Sbjct: 420 VWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNH 479
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEK
Sbjct: 480 SQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEK 539
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEK 627
IH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEK
Sbjct: 540 IHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEK 599
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
RYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LG
Sbjct: 600 RYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLG 659
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
AKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPS
Sbjct: 660 AKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPS 719
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NV
Sbjct: 720 NIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANV 779
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
EKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGRE
Sbjct: 780 EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGRE 839
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YK
Sbjct: 840 KDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYK 899
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
EQK LVEGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EQKALVEGPLNNLRESLMQFSKPRKLVNTVN 930
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
Length = 1124
Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/991 (68%), Positives = 779/991 (78%), Gaps = 94/991 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPGGA 60
Query: 50 -------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELP 98
QLD+ QV + L N ++ SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 GAGGAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYYTKDLP 114
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 115 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 174
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 175 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 234
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 284
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 285 ---------------------------QHVLLRYE------------------DAYQYQN 299
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-----------D 387
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD D
Sbjct: 300 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRD 359
Query: 388 MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDF 447
MRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF
Sbjct: 360 MRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDF 419
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN
Sbjct: 420 VWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNH 479
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEK
Sbjct: 480 SQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEK 539
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEK 627
IH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEK
Sbjct: 540 IHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEK 599
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
RYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LG
Sbjct: 600 RYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLG 659
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
AKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPS
Sbjct: 660 AKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPS 719
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NV
Sbjct: 720 NIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANV 779
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
EKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGRE
Sbjct: 780 EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGRE 839
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YK
Sbjct: 840 KDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYK 899
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
EQK LVEGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EQKALVEGPLNNLRESLMQFSKPRKLVNTVN 930
>gi|47217411|emb|CAG00771.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1186
Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/1018 (67%), Positives = 787/1018 (77%), Gaps = 109/1018 (10%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQA---SQLDSVNQI 57
MSV+AYGPSSQTLTFLDTEET+L+G DTQGSE+DFTDFTLPSQ+QTQ SQLD+
Sbjct: 1 MSVEAYGPSSQTLTFLDTEETELLGADTQGSEYDFTDFTLPSQTQTQGHTQSQLDN---- 56
Query: 58 QVNGKQNL-DNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAY 112
Q+NG +L N L+ SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA
Sbjct: 57 QINGPDDLLHNGGLDDSVAKASQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPAC 114
Query: 113 VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFV 172
V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+
Sbjct: 115 VVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFL 174
Query: 173 LGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQR 232
LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R
Sbjct: 175 LGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLR 234
Query: 233 GRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLE 292
RQ+ + QI KLEE+WKDN AT +DLEKPGVDE+P VLLRYED YQYQNIFGPLVKLE
Sbjct: 235 ARQIAAQQINKLEELWKDNPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLE 294
Query: 293 ADYDKRLKESQT-QENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYD 351
ADYDK+LKESQ + ++TVRWD+GLNKK IAYF+L KTD Y + ++ PL
Sbjct: 295 ADYDKKLKESQVPRTDITVRWDLGLNKKRIAYFTLPKTDSGVYSFHSL--PL-------- 344
Query: 352 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGL 411
SL DMRLMQGDE+ LRY D + W G+
Sbjct: 345 ----------------------------SL-----DMRLMQGDEICLRYKGDLAPLWKGI 371
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSV 471
GHVIK+PDN+GDE+ +EL+SSAGAP E + VDF+WKSTSFDRMQ AL+ FAVD+ SV
Sbjct: 372 GHVIKVPDNYGDEIAIELRSSAGAPVEIPHNYQVDFVWKSTSFDRMQSALKTFAVDETSV 431
Query: 472 SAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTG 531
S YIYH+LLGH V++V +C LPK F+AP LPDLN SQVYAVK +QRPLSLIQGPPGTG
Sbjct: 432 SGYIYHKLLGHEVEDVTIKCQLPKRFTAPGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTG 491
Query: 532 KTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
KTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAI+SPVS
Sbjct: 492 KTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSREAIESPVS 551
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
FLALHNQI NM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTC
Sbjct: 552 FLALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTC 611
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK---------------------- 689
VGAGDPRL K++F SILIDES QATEPECMVPV+LGAK
Sbjct: 612 VGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQVHTHTHTRAHNNRPCFSYPPS 671
Query: 690 --QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
QLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPS
Sbjct: 672 CPQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPS 731
Query: 748 NFFYEGSLQNGVC---------------------------ADERKLSKIDFPWPVPDKPM 780
N FYEGSLQNGV A +R DF WP P+KPM
Sbjct: 732 NIFYEGSLQNGVTAGWISLNALEMNATVKSEPHSQIGCLLAGDRIKKGFDFQWPQPEKPM 791
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYEGQR++LVQ+
Sbjct: 792 FFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQY 851
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
MQ+ GSL K+YQ++E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA
Sbjct: 852 MQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRA 911
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
KYG+I++GNPK LSKQPLWNNLLN YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 912 KYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 969
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 1131
Score = 1398 bits (3618), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/991 (68%), Positives = 779/991 (78%), Gaps = 94/991 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 8 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPGGA 67
Query: 50 -------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELP 98
QLD+ QV + L N ++ SQ L EL FEE+E+D ++ K+LP
Sbjct: 68 GAGGAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYYTKDLP 121
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 122 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 181
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 182 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 241
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 242 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 291
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 292 ---------------------------QHVLLRYE------------------DAYQYQN 306
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-----------D 387
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD D
Sbjct: 307 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRD 366
Query: 388 MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDF 447
MRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF
Sbjct: 367 MRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDF 426
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN
Sbjct: 427 VWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNH 486
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEK
Sbjct: 487 SQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEK 546
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEK 627
IH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEK
Sbjct: 547 IHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEK 606
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
RYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LG
Sbjct: 607 RYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLG 666
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
AKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPS
Sbjct: 667 AKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPS 726
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NV
Sbjct: 727 NIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANV 786
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
EKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGRE
Sbjct: 787 EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGRE 846
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YK
Sbjct: 847 KDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYK 906
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
EQK LVEGPLNNL+ESL+ FSKP++ N
Sbjct: 907 EQKALVEGPLNNLRESLMQFSKPRKLVNTVN 937
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 1396 bits (3614), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/991 (68%), Positives = 779/991 (78%), Gaps = 94/991 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPAGA 60
Query: 50 -------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELP 98
QLD+ QV + L N ++ SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 GAGGAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYYTKDLP 114
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 115 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 174
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 175 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 234
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 284
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 285 ---------------------------QHVLLRYE------------------DAYQYQN 299
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-----------D 387
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD D
Sbjct: 300 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRD 359
Query: 388 MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDF 447
MRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF
Sbjct: 360 MRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDF 419
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN
Sbjct: 420 VWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNH 479
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEK
Sbjct: 480 SQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEK 539
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEK 627
IH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEK
Sbjct: 540 IHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEK 599
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
RYR LK+ AE+ LL NADVICCTCVGAGDPRL +++F SILIDES QATEPECMVPV+LG
Sbjct: 600 RYRALKRTAERELLMNADVICCTCVGAGDPRLAEMQFRSILIDESTQATEPECMVPVVLG 659
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
AKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPS
Sbjct: 660 AKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPS 719
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NV
Sbjct: 720 NIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANV 779
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
EKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGRE
Sbjct: 780 EKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLYTKLYQEVEIASVDAFQGRE 839
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YK
Sbjct: 840 KDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYK 899
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
EQK LVEGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EQKALVEGPLNNLRESLMQFSKPRKLVNTVN 930
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 1393 bits (3606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/973 (69%), Positives = 781/973 (80%), Gaps = 76/973 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSV+AYGPSSQTLTFLD EET+L+G DTQGSE+DFTDFTLPSQ+QTQ S + QVN
Sbjct: 1 MSVEAYGPSSQTLTFLDIEETELLGADTQGSEYDFTDFTLPSQTQTQGQ---SQLENQVN 57
Query: 61 GK----QNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
G QN +++ + SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ C
Sbjct: 58 GPDIVLQNGEDAVVK-ASQLLAELNFEEDEEDA--YYTKDLPAHACSYCGIHDPACVVYC 114
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
N KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFI
Sbjct: 115 NTSKKWFCNGRGNTSGSHIVNHLVRAKSKEVTLHKDGPLGETVLECYNCGCRNVFLLGFI 174
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+
Sbjct: 175 PAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQI 234
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
T+ QI KLEE+WK+N A+ +DLEKPGVDE+P
Sbjct: 235 TAQQINKLEELWKENPCASLEDLEKPGVDEEP---------------------------- 266
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
++V +R++ D YQYQNIFGPLVKLEADYDK+LKE
Sbjct: 267 ---------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLKE 299
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDG-----------DMRLMQGDELKLRYSYDAS 405
SQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D +
Sbjct: 300 SQTQDNITVRWDLGLNKKRIAYFTLPKTDSGTFYLIITIIPDMRLMQGDEICLRYKGDLA 359
Query: 406 KTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFA 465
W G+GHVIK+PDN+GDE+ +EL+SSAGAP E F VDF+WKSTSFDRMQ AL+ FA
Sbjct: 360 PPWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFA 419
Query: 466 VDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQ 525
VD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQ
Sbjct: 420 VDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQ 479
Query: 526 GPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREA 585
GPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREA
Sbjct: 480 GPPGTGKTVTSATIVYHLARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREA 539
Query: 586 IDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNAD 645
IDSPVSFLALHNQ RNME EL+KL QLK+ETGELSS+DEKRYR L++ AE+ LL NAD
Sbjct: 540 IDSPVSFLALHNQTRNMESMPELQKLQQLKDETGELSSSDEKRYRALRRTAERELLMNAD 599
Query: 646 VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM 705
VICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVM
Sbjct: 600 VICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVM 659
Query: 706 CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
CKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R
Sbjct: 660 CKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRV 719
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIG 825
DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG
Sbjct: 720 KKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIG 779
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIG
Sbjct: 780 IITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIG 839
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLI 945
FLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+
Sbjct: 840 FLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLM 899
Query: 946 LFSKPKQYFKKNN 958
FSKP++ N
Sbjct: 900 QFSKPRKLVNTIN 912
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 1391 bits (3600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/985 (68%), Positives = 773/985 (78%), Gaps = 88/985 (8%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAG 60
Query: 50 ------------QLDSVNQIQVNGKQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFF 93
QLD+ QV + L N ++ SQ L EL FEE+E+D ++
Sbjct: 61 GPGGAGAGAAAGQLDA----QVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEED--TYY 114
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 115 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 174
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 175 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 234
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 235 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 289
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 290 --------------------------------QHVLLRYE------------------DA 299
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADY + TQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 300 YQYQNIFGPLVKLEADYXXXXVGADTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 359
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 360 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 419
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 420 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV 479
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 480 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL 539
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 540 KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 599
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 600 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 659
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 660 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 719
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 720 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 779
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 780 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 839
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLV
Sbjct: 840 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 899
Query: 934 EGPLNNLKESLILFSKPKQYFKKNN 958
EGPLNNL+ESL+ FSKP++ N
Sbjct: 900 EGPLNNLRESLMQFSKPRKLVNTIN 924
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 1375 bits (3560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/966 (69%), Positives = 763/966 (78%), Gaps = 77/966 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQA---SQLDSVNQI 57
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEFDFTDFTLPSQ+QTQ SQLDS
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFDFTDFTLPSQTQTQGQTPSQLDS---- 56
Query: 58 QVNG-KQNLDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAY 112
QVNG + L N L+ SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA
Sbjct: 57 QVNGPDEGLLNGGLDDSVAKTSQFLGELNFEEDEEDA--YYTKDLPVHACSYCGIHDPAC 114
Query: 113 VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFV 172
V+ CN KKWFCNGRG+TSGSHI+NH+VRAK KEVTLHKDGPLGETVLECY CG RN+F+
Sbjct: 115 VVYCNTSKKWFCNGRGNTSGSHIVNHMVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFL 174
Query: 173 LGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQR 232
LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R
Sbjct: 175 LGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLR 234
Query: 233 GRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLE 292
RQ+T+ QI KLEE+WKDN A +DLEKPG DE+P
Sbjct: 235 ARQITAQQINKLEELWKDNPTAALEDLEKPGXDEEP------------------------ 270
Query: 293 ADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDK 352
++V +R++ D YQYQNIFGPLV L D
Sbjct: 271 -------------QHVLLRYE------------------DAYQYQNIFGPLVLLSFFLDS 299
Query: 353 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLG 412
+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+G
Sbjct: 300 --------DNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIG 351
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVS 472
HVIK+PDN+GDE+ +EL+SS GAP E F VDF+WKSTSFDRMQ AL+ FAVD+ SVS
Sbjct: 352 HVIKVPDNYGDEIAIELRSSVGAPVEIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVS 411
Query: 473 AYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 532
YIYH+LLGH V++V +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGK
Sbjct: 412 GYIYHKLLGHEVEDVTIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK 471
Query: 533 TVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSF 592
TVTSATIVY L +Q PVLVCAPSNIAVDQLTEKI +TGLKVVR+CAKSREAI+SPVSF
Sbjct: 472 TVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSF 531
Query: 593 LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
LALHNQI NM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCV
Sbjct: 532 LALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCV 591
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+A
Sbjct: 592 GAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKA 651
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF
Sbjct: 652 GLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIKKGFDFQ 711
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYEG
Sbjct: 712 WPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEG 771
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QR++LVQ+MQ+ GSL K+YQ++E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRR
Sbjct: 772 QRSYLVQYMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRR 831
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
LNVALTRAKYG+I++GNPK LSKQPLWNNLLN YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 832 LNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRK 891
Query: 953 YFKKNN 958
N
Sbjct: 892 LVNTIN 897
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 1369 bits (3544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 676/965 (70%), Positives = 766/965 (79%), Gaps = 65/965 (6%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQL---DSVNQI 57
MSVDAY P+SQ+LTFL+ EE DLIG DTQG+++D+TDFTLPSQ+Q+Q +Q
Sbjct: 1 MSVDAYAPNSQSLTFLEPEE-DLIGADTQGTDYDYTDFTLPSQTQSQTQASQLEHGQSQS 59
Query: 58 QVNGK----QNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
QVNG QN + + ++Q + EL FEEEE+ +F K+LP HAC YCGIHDPA V
Sbjct: 60 QVNGPEAPIQNGLDKGVVGIAQGVGELTFEEEEE--EQFMMKDLPKHACSYCGIHDPASV 117
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+ CN KKWFCNGRG+TSGSHIINHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+L
Sbjct: 118 VYCNSTKKWFCNGRGNTSGSHIINHLVRAKAKEVTLHKDGPLGETVLECYNCGCRNVFLL 177
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCA +LKDMNWD QW+PLI DR FLSWLVKVP++QEQ R
Sbjct: 178 GFIPAKADSVVVLLCRQPCATLTNLKDMNWDPSQWQPLIQDRQFLSWLVKVPSDQEQMRS 237
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+WKDN +AT +DLEKPGVDE+P QVLLR
Sbjct: 238 RQISAQQINKLEELWKDNPDATLEDLEKPGVDEEPTQVLLR------------------- 278
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
YD D YQYQNIFGPLVKLEADYDK+
Sbjct: 279 -YD-----------------------------------DAYQYQNIFGPLVKLEADYDKK 302
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
LKESQTQ+N+ VRWDVGLNKK IA+F L K + +M+LM GDEL+LRY + K WSG+GH
Sbjct: 303 LKESQTQDNIVVRWDVGLNKKRIAFFHLPKANDEMKLMHGDELRLRYQGELHKPWSGVGH 362
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN DEV +ELKS+AG P+E T F VDF+WKSTSFDRMQ AL+ FAVD+ SV
Sbjct: 363 VIKIPDNHSDEVAIELKSNAGVPSECTHNFVVDFVWKSTSFDRMQAALKTFAVDETSVWG 422
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYH+LLGH V++V+ +C LPK FS PNLP+LN SQVYAVK +QRPLSLIQGPPGTGKT
Sbjct: 423 YIYHKLLGHEVEDVVIKCQLPKRFSVPNLPELNHSQVYAVKTVLQRPLSLIQGPPGTGKT 482
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVY LVKQ VLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFL
Sbjct: 483 VTSATIVYHLVKQNNGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSREAIDSPVSFL 542
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
ALHNQIRNME EL+KL QLK+ETGELSS DEKRYR LKK EK LL +ADVICCTCVG
Sbjct: 543 ALHNQIRNMESVPELQKLQQLKDETGELSSTDEKRYRSLKKQCEKELLQHADVICCTCVG 602
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
GDPRL K++F S+LIDES QATEPECM+PV+LG +QLILVGDHCQLGPVVMCKKAARAG
Sbjct: 603 TGDPRLAKMQFRSVLIDESTQATEPECMIPVVLGCRQLILVGDHCQLGPVVMCKKAARAG 662
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
LSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV +R +D PW
Sbjct: 663 LSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVAPGDRVRKGLDIPW 722
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
P DKPM FY T GQEEI+ SGTSY+NRTEA+NVEKI TRF+R +KPEQIG+ITPYEGQ
Sbjct: 723 PQGDKPMFFYTTSGQEEISSSGTSYLNRTEAANVEKIATRFLRSNVKPEQIGIITPYEGQ 782
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
RA++VQ+MQY GSL K+YQEIEVASVDAFQGREKD II+SCVRSN+HQGIGFLNDPRRL
Sbjct: 783 RAYIVQYMQYSGSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLNDPRRL 842
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
NVALTRAKYGII++GNPKVLSKQPLWN+LL +YKEQK LVEGPLNNLKES+I FSKP++
Sbjct: 843 NVALTRAKYGIIIVGNPKVLSKQPLWNHLLTYYKEQKCLVEGPLNNLKESMIQFSKPRKL 902
Query: 954 FKKNN 958
+N
Sbjct: 903 VNTSN 907
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 1362 bits (3525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/969 (67%), Positives = 774/969 (79%), Gaps = 76/969 (7%)
Query: 1 MSVDA-YGPSSQTLTFLDTEETDLIG------------GDTQGSEFDFTDFTLPSQSQTQ 47
MS+D Y PSSQ L FL+T+E D+IG DTQGSEF+FTDFTLPSQS
Sbjct: 1 MSIDILYEPSSQDLVFLETDEVDIIGEDTQSDDADTICADTQGSEFEFTDFTLPSQSIPP 60
Query: 48 ASQLDS---VNQIQ-VNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACK 103
SQL+ +++Q ++ + + +++++ V++ + EL+F++EE+D FF +ELP +ACK
Sbjct: 61 MSQLELPSLAHRMQFLSDEIDKNDTHVTTVTKTIGELRFKDEEEDS--FFTQELPYYACK 118
Query: 104 YCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY 163
YCGIHDP V+MCNICKKWFCNGRG+TSGSHIINHLVRA HKEVT HKDGPLGETVLECY
Sbjct: 119 YCGIHDPGCVVMCNICKKWFCNGRGNTSGSHIINHLVRANHKEVTFHKDGPLGETVLECY 178
Query: 164 TCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVK 223
+CGV+N+FVLGF+ AK DSV+VLLCR PC+ QN+LKD+NWDQEQWKPLIADR FL+WLVK
Sbjct: 179 SCGVKNVFVLGFVTAKGDSVLVLLCRQPCSTQNTLKDLNWDQEQWKPLIADRCFLTWLVK 238
Query: 224 VPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQN 283
VP +Q R R +++ QI KLEE+W+ N EAT DL+KPG+DE+
Sbjct: 239 VPNTTDQFRSRNISATQITKLEELWRHNNEATINDLDKPGIDEE---------------- 282
Query: 284 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPL 343
Q+ V +R+ DG+ Y+N+FG L
Sbjct: 283 ---------------------QQIVLLRYK------------------DGFHYKNVFGSL 303
Query: 344 VKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYD 403
VKL AD DK LKES+TQEN+TVRWDVGLNKK +A+F L KTDGDMRLM DEL+LR +
Sbjct: 304 VKLVADNDKHLKESRTQENITVRWDVGLNKKFVAFFHLVKTDGDMRLMYDDELRLRLT-- 361
Query: 404 ASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRK 463
W G+GHVIKIPDN+G+ +GLE+KS+ G PTE T+ + VD+IWKSTSFDRMQ +L +
Sbjct: 362 GENPWEGIGHVIKIPDNYGEGIGLEMKSNKGVPTEITSNYKVDYIWKSTSFDRMQCSLNR 421
Query: 464 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 523
FA D+ SVS YIYH+LLGH D+++FR H+PKHFSAPNLPDLNRSQV AVKHA+QRPLSL
Sbjct: 422 FATDESSVSTYIYHKLLGHEFDDLIFRSHMPKHFSAPNLPDLNRSQVKAVKHAVQRPLSL 481
Query: 524 IQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR 583
IQGPPGTGKTVTSATIVYQLV G PVLVCAPSNIAVDQLTEKIHRTGLKVVR+C+KSR
Sbjct: 482 IQGPPGTGKTVTSATIVYQLVTINGGPVLVCAPSNIAVDQLTEKIHRTGLKVVRLCSKSR 541
Query: 584 EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDN 643
E+IDSPVSFLALHNQ++ + N L+KL QLK ETGELS DEKRY +LKK AE+ LL+
Sbjct: 542 ESIDSPVSFLALHNQVQKLPSNGVLQKLQQLKNETGELSMDDEKRYSVLKKVAEQELLEA 601
Query: 644 ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPV 703
ADVIC TCVGAGDPRL++ KFHSILIDES+QATEPECMVPV+ G +QLILVGDHCQLGPV
Sbjct: 602 ADVICTTCVGAGDPRLMQFKFHSILIDESVQATEPECMVPVVHGVQQLILVGDHCQLGPV 661
Query: 704 VMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
V CKKAA AGL+QSLFERLVVLGIRPFRLEVQYRMHPELS+F SNFFYEGSLQNGVCAD+
Sbjct: 662 VTCKKAANAGLTQSLFERLVVLGIRPFRLEVQYRMHPELSRFSSNFFYEGSLQNGVCADD 721
Query: 764 RKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ 823
RKL KI+FPWPV D+PMLFY T G EEIAGSGTSY+NRTEA+NVE I TRF+RCG++P+Q
Sbjct: 722 RKLRKIEFPWPVADEPMLFYATLGHEEIAGSGTSYLNRTEAANVEHIATRFLRCGVRPDQ 781
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
IG+ITPYEGQRA+LVQ+MQYQ LPAK+YQ+IE+ASVDAFQGREKD IIMSCVRSN++QG
Sbjct: 782 IGIITPYEGQRAYLVQYMQYQAPLPAKLYQKIEIASVDAFQGREKDFIIMSCVRSNENQG 841
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
IGFLNDPRRLNVALTRAKYG++++GNPKVLSK+ LWN+LLN+YK + VLVEGPLNNLK S
Sbjct: 842 IGFLNDPRRLNVALTRAKYGLLIVGNPKVLSKKQLWNHLLNYYKAKNVLVEGPLNNLKPS 901
Query: 944 LILFSKPKQ 952
I KPKQ
Sbjct: 902 PIQLPKPKQ 910
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 1353 bits (3502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/808 (79%), Positives = 704/808 (87%), Gaps = 55/808 (6%)
Query: 151 KDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKP 210
+DGPLGETVLECY+C RN+FVLGFIPAKADSVVVLLCR PCAAQ+SLKDMNWDQEQWKP
Sbjct: 1 RDGPLGETVLECYSCATRNVFVLGFIPAKADSVVVLLCRQPCAAQSSLKDMNWDQEQWKP 60
Query: 211 LIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQ 270
LI DRSFLSWLVK P+EQEQ R RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P Q
Sbjct: 61 LIEDRSFLSWLVKFPSEQEQLRARQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQ 120
Query: 271 VLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
V +R++
Sbjct: 121 -------------------------------------VLLRYE----------------- 126
Query: 331 GDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRL 390
DGYQYQNIFGPLVKLEADYDKRLKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGDM+L
Sbjct: 127 -DGYQYQNIFGPLVKLEADYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGDMKL 185
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWK 450
M GDEL+LRY + K WSG+GHVIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWK
Sbjct: 186 MHGDELRLRYLGELHKPWSGIGHVIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWK 245
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
STSFDRMQ ALRKFAVDD SVS YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQV
Sbjct: 246 STSFDRMQSALRKFAVDDSSVSGYIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQV 305
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH+
Sbjct: 306 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHK 365
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
+ LKVVR+CAKSREAIDSPVSFLALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR
Sbjct: 366 SNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYR 425
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
+LKK AEK LL+ ADVICCTCVGAGDPRL ++KFHSILIDESMQATEPECMVPV+LGAKQ
Sbjct: 426 LLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVPVVLGAKQ 485
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP+LS+FPSNFF
Sbjct: 486 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPDLSRFPSNFF 545
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGVCADERKL KIDFPWP PDKPM FYVTQGQEEIAGSGTSY+NRTEASNVEKI
Sbjct: 546 YEGSLQNGVCADERKLLKIDFPWPAPDKPMFFYVTQGQEEIAGSGTSYLNRTEASNVEKI 605
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TTRF+RCG+KPEQIGVITPYEGQRA+LVQ+MQYQGSL +K+YQEIEVASVDAFQGREKD+
Sbjct: 606 TTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSKLYQEIEVASVDAFQGREKDI 665
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
IIMSCVRSN+HQGIGFLNDPRRLNVALTRAKYGII++GNPKVLSKQPLWN+LL+FYKEQK
Sbjct: 666 IIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQK 725
Query: 931 VLVEGPLNNLKESLILFSKPKQYFKKNN 958
VLVEGPLNNLKES+I F+KPK+ N
Sbjct: 726 VLVEGPLNNLKESMIQFAKPKKLVNAAN 753
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 1353 bits (3502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 651/949 (68%), Positives = 748/949 (78%), Gaps = 79/949 (8%)
Query: 32 EFDFTDFTLPSQSQTQASQLDSVN-----------------QIQVNGKQNL-----DNSN 69
E FTDFTLPSQ+QT + + QVNG + + N
Sbjct: 11 EEGFTDFTLPSQTQTPPGPGQAGPGQAQGAPGAGQGPAGPIEAQVNGPDGILQNGAVDDN 70
Query: 70 LNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGH 129
+ SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+
Sbjct: 71 VAKTSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGN 128
Query: 130 TSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCR 189
TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR
Sbjct: 129 TSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCR 188
Query: 190 TPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWK 249
PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK
Sbjct: 189 QPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWK 248
Query: 250 DNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVT 309
+N AT +DLEKPGVDE+P ++V
Sbjct: 249 ENPSATLEDLEKPGVDEEP-------------------------------------QHVL 271
Query: 310 VRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 369
+R++ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+
Sbjct: 272 LRYE------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDL 313
Query: 370 GLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLEL 429
GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL
Sbjct: 314 GLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIEL 373
Query: 430 KSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF 489
+SS GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+
Sbjct: 374 RSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVII 433
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
+C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q
Sbjct: 434 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNG 493
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELK 609
PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+
Sbjct: 494 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQ 553
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILI
Sbjct: 554 KLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILI 613
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
DES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP
Sbjct: 614 DESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRP 673
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQE
Sbjct: 674 IRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 733
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
EIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL
Sbjct: 734 EIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHT 793
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GN
Sbjct: 794 KLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 853
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
PK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 854 PKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 902
>gi|18202669|sp|Q98TR3.1|RENT1_FUGRU RecName: Full=Putative regulator of nonsense transcripts 1;
AltName: Full=ATP-dependent helicase RENT1
gi|13161880|emb|CAC33025.1| hypothetical protein [Takifugu rubripes]
Length = 1097
Score = 1349 bits (3491), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/967 (68%), Positives = 768/967 (79%), Gaps = 72/967 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQA---SQLDSVNQI 57
MSV+AYGPSSQTLTFLDTEET+L+G DTQGSE+DFTDFTLPSQ+QTQ SQLD+
Sbjct: 1 MSVEAYGPSSQTLTFLDTEETELLGADTQGSEYDFTDFTLPSQTQTQGHTQSQLDN---- 56
Query: 58 QVNGKQN-LDNSNLN----LVSQKLHELQFEEEEDDGNEFFNKELPPHACK-YCGIHDPA 111
Q+NG + L N ++ SQ L EL FEE+E+D ++ K+LP HAC+ YCGIHDPA
Sbjct: 57 QLNGPDDGLHNGGMDDSVAKASQLLAELNFEEDEED--TYYTKDLPVHACRSYCGIHDPA 114
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F
Sbjct: 115 CVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVF 174
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ
Sbjct: 175 LLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQL 234
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKL 291
R RQ+T+ QI KLEE+WKDN AT +DLEKPGVDE+P
Sbjct: 235 RARQITAQQINKLEELWKDNPCATLEDLEKPGVDEEP----------------------- 271
Query: 292 EADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYD 351
++V +R++ D YQYQNIFGPLVKLEADYD
Sbjct: 272 --------------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYD 299
Query: 352 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGL 411
K+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+
Sbjct: 300 KKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGI 359
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSV 471
GHVIK+PD++GDE+ +EL++S GAP E + VDF+WKSTSFDRMQ AL+ FAVD+ SV
Sbjct: 360 GHVIKVPDSYGDEIAIELRTSVGAPVEIPHNYQVDFVWKSTSFDRMQSALKTFAVDETSV 419
Query: 472 SAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTG 531
S YIYH+LLGH V++V +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTG
Sbjct: 420 SGYIYHKLLGHEVEDVTIKCQLPKRFTANGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTG 479
Query: 532 KTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
KTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKI +TGLKVVR+CAKSREAI+SPVS
Sbjct: 480 KTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVS 539
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
FLALHNQI NM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVI CTC
Sbjct: 540 FLALHNQISNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVIWCTC 599
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
V AGDPRL K++F SILIDES QATEP+C+ PV LGAKQLIL G+ VMCKKAA+
Sbjct: 600 VRAGDPRLAKMQFRSILIDESTQATEPKCIGPVELGAKQLIL-GEITASWSCVMCKKAAK 658
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF
Sbjct: 659 AGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDF 718
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
WP P+KPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITTR ++ G KP+QIG+ITPYE
Sbjct: 719 QWPQPEKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYE 778
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
GQR++LVQ+MQ+ GSL K+YQ +E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPR
Sbjct: 779 GQRSYLVQYMQFSGSLHTKLYQ-VEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPR 837
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RLNVALTRAKYG+I++GNPK LSKQPLWNNLLN YKEQKVLVEGPLNNL+ESL+ FSKP+
Sbjct: 838 RLNVALTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPR 897
Query: 952 QYFKKNN 958
+ N
Sbjct: 898 KLVNTIN 904
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 1343 bits (3475), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/917 (70%), Positives = 739/917 (80%), Gaps = 68/917 (7%)
Query: 48 ASQLDSVNQIQVNGKQNL------DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHA 101
A QLD+ QV G + + D+S + SQ L EL FEE+E+D ++ K+LP HA
Sbjct: 4 AGQLDA----QVGGPEGILQNGAVDDS-VAKTSQLLAELNFEEDEED--TYYTKDLPVHA 56
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLE
Sbjct: 57 CSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLE 116
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
CY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWL
Sbjct: 117 CYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWL 176
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
VK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 177 VKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP------------- 223
Query: 282 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFG 341
++V +R++ D YQYQNIFG
Sbjct: 224 ------------------------QHVLLRYE------------------DAYQYQNIFG 241
Query: 342 PLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYS 401
PLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY
Sbjct: 242 PLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYK 301
Query: 402 YDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLAL 461
D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ AL
Sbjct: 302 GDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSAL 361
Query: 462 RKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPL 521
+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPL
Sbjct: 362 KTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPL 421
Query: 522 SLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAK 581
SLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAK
Sbjct: 422 SLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAK 481
Query: 582 SREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
SREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL
Sbjct: 482 SREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELL 541
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLG 701
NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLG
Sbjct: 542 MNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLG 601
Query: 702 PVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
PVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A
Sbjct: 602 PVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTA 661
Query: 762 DERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKP 821
+R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP
Sbjct: 662 ADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKP 721
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+H
Sbjct: 722 DQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEH 781
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLK 941
QGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+
Sbjct: 782 QGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLR 841
Query: 942 ESLILFSKPKQYFKKNN 958
ESL+ FSKP++ N
Sbjct: 842 ESLMQFSKPRKLVNTIN 858
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 1342 bits (3473), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/892 (71%), Positives = 728/892 (81%), Gaps = 57/892 (6%)
Query: 67 NSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNG 126
+ N+ SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNG
Sbjct: 27 DDNVAKTSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNG 84
Query: 127 RGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVL 186
RG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVL
Sbjct: 85 RGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVL 144
Query: 187 LCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEE 246
LCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE
Sbjct: 145 LCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEE 204
Query: 247 VWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
+WK+N AT +DLEKPGVDE+P +
Sbjct: 205 LWKENPSATLEDLEKPGVDEEP-------------------------------------Q 227
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 366
+V +R++ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVR
Sbjct: 228 HVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVR 269
Query: 367 WDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVG 426
WD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+
Sbjct: 270 WDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIA 329
Query: 427 LELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 486
+EL+SS GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++
Sbjct: 330 IELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVED 389
Query: 487 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q
Sbjct: 390 VIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQ 449
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS 606
PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+
Sbjct: 450 GNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMP 509
Query: 607 ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F S
Sbjct: 510 ELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 569
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG 726
ILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLG
Sbjct: 570 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLG 629
Query: 727 IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ 786
IRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQ
Sbjct: 630 IRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQ 689
Query: 787 GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGS 846
GQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GS
Sbjct: 690 GQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGS 749
Query: 847 LPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
L K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I+
Sbjct: 750 LHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVII 809
Query: 907 IGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
+GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 810 VGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 861
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 1342 bits (3472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 142 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 199
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 200 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 259
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 260 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 319
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 320 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 342
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 343 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 384
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 385 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 444
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 445 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 504
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 505 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 564
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 565 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 624
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 625 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 684
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 685 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 744
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 745 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 804
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 805 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 864
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 865 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 924
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 925 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 970
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 19 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 76
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 77 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 136
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 137 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 196
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 197 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 219
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 220 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 261
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 262 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 321
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 322 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 381
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 382 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 441
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 442 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 501
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 502 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 561
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 562 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 621
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 622 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 681
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 682 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 741
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 742 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 801
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 802 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 847
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 42 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 99
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 100 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 159
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 160 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 219
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 220 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 242
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 243 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 284
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 285 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 344
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 345 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 404
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 405 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 464
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 465 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 524
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 525 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 584
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 585 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 644
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 645 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 704
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 705 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 764
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 765 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 824
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 825 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 870
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 235 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 292
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 293 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 352
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 353 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 412
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 413 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 435
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 436 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 477
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 478 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 537
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 538 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 597
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 598 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 657
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 658 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 717
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 718 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 777
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 778 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 837
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 838 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 897
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 898 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 957
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 958 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 1017
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 1018 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 1063
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 74 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 131
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 132 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 191
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 192 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 251
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 252 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 274
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 275 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 316
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 317 KKRIAYFTLPKTDSDMRLMQGDEICLRYXGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 376
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 377 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 436
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 437 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 496
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 497 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 556
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 557 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 616
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 617 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 676
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 677 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 736
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 737 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 796
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 797 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 856
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 857 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 902
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 1341 bits (3470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 635/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 65 TSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 122
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 123 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 182
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 183 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 242
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 243 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 265
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 266 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 307
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 308 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 367
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 368 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 427
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 428 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 487
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 488 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 547
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 548 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 607
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 608 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 667
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A ER DF WP PDKPM FYVTQGQEEIA
Sbjct: 668 QVQYRMHPALSAFPSNIFYEGSLQNGVTAAERVKKGFDFQWPQPDKPMFFYVTQGQEEIA 727
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 728 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 787
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 788 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 847
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 848 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 893
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 1341 bits (3470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 31 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 88
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 89 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 148
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 149 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 208
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 209 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 231
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 232 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 273
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 274 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 333
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 334 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 393
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 394 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 453
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 454 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 513
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 514 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 573
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 574 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 633
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 634 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 693
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 694 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 753
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 754 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 813
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 814 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 859
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 1341 bits (3470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 57 TSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 114
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 115 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 174
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 175 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 234
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 235 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 257
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 258 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 299
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 300 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 359
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 360 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 419
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 420 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 479
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 480 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 539
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 540 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 599
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 600 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 659
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 660 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 719
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 720 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 779
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 780 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 839
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 840 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 885
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 1341 bits (3470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 33 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 90
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 91 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 150
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 151 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 210
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 211 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 233
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 234 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 275
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 276 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 335
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 336 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 395
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 396 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 455
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 456 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 515
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 516 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 575
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 576 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 635
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 636 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 695
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 696 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 755
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 756 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 815
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 816 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 861
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus
harrisii]
Length = 1050
Score = 1340 bits (3468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 28 TSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 85
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 86 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 145
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 146 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 205
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 206 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 228
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 229 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 270
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 271 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 330
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 331 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 390
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 391 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 450
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 451 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 510
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 511 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 570
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 571 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 630
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 631 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 690
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 691 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 750
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 751 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 810
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 811 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 856
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 1339 bits (3466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/886 (71%), Positives = 724/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 141 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 198
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 199 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 258
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+ LKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 259 ASQSXLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 318
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 319 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 341
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 342 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 383
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 384 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 443
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 444 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 503
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 504 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 563
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 564 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 623
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 624 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 683
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 684 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 743
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 744 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 803
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 804 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 863
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 864 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 923
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 924 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 969
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 1338 bits (3464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/886 (71%), Positives = 725/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 285 TSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 342
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 343 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 402
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 403 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 462
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 463 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 485
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 486 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 527
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 528 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 587
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 588 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 647
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 648 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 707
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSR+AIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 708 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSRKAIDSPVSFLALHNQIRNMDSMPELQKLQ 767
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 768 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 827
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 828 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 887
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 888 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 947
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 948 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 1007
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 1008 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 1067
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 1068 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 1113
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 34/38 (89%)
Query: 10 SQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQ 47
SQTLTFL TEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 140 SQTLTFLATEEAELLGADTQGSEFEFTDFTLPSQTQTH 177
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 1337 bits (3460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/886 (71%), Positives = 724/886 (81%), Gaps = 57/886 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 39 TSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 96
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 97 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 156
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 157 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 216
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 217 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 239
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 240 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 281
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IA+F+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 282 KKRIAFFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 341
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 342 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQ 401
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 402 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 461
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 462 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 521
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 522 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 581
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 582 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 641
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 642 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 701
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 702 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 761
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 762 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 821
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LL++YKEQK LVEGPLNNL+ESL+ FSKP++ N
Sbjct: 822 LSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKPRKLVNTVN 867
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 1332 bits (3447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/897 (70%), Positives = 725/897 (80%), Gaps = 68/897 (7%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 20 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 77
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 78 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 137
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 138 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 197
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 198 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 220
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 221 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 262
Query: 373 KKSIAYFSLAKTDG-----------DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNF 421
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+
Sbjct: 263 KKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNY 322
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLG
Sbjct: 323 GDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLG 382
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVY 541
H V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY
Sbjct: 383 HEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVY 442
Query: 542 QLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN 601
L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRN
Sbjct: 443 HLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRN 502
Query: 602 MEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
M+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K
Sbjct: 503 MDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAK 562
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFER
Sbjct: 563 MQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFER 622
Query: 722 LVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
LVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM
Sbjct: 623 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMF 682
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+M
Sbjct: 683 FYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYM 742
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
Q+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+
Sbjct: 743 QFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 802
Query: 902 YGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 803 YGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 859
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 1321 bits (3419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/893 (70%), Positives = 725/893 (81%), Gaps = 61/893 (6%)
Query: 67 NSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNG 126
+ N+ SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNG
Sbjct: 33 DDNVAKTSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNG 90
Query: 127 RGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVL 186
RG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVL
Sbjct: 91 RGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVL 150
Query: 187 LCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEE 246
LCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE
Sbjct: 151 LCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEE 210
Query: 247 VWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
+WK+N AT +DLEKPGVDE+P +
Sbjct: 211 LWKENPSATLEDLEKPGVDEEP-------------------------------------Q 233
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 366
+V +R++ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVR
Sbjct: 234 HVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVR 275
Query: 367 WDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVG 426
WD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+
Sbjct: 276 WDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIA 335
Query: 427 LELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 486
+EL+SS GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++
Sbjct: 336 IELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVED 395
Query: 487 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q
Sbjct: 396 VIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQ 455
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS 606
PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+
Sbjct: 456 GNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMP 515
Query: 607 ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F S
Sbjct: 516 ELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRS 575
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG 726
ILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVL
Sbjct: 576 ILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVL- 634
Query: 727 IRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT 785
P+ L+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVT
Sbjct: 635 --PWGCLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVT 692
Query: 786 QGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
QGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ G
Sbjct: 693 QGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSG 752
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
SL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I
Sbjct: 753 SLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVI 812
Query: 906 VIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 813 IVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 865
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 1315 bits (3404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/855 (72%), Positives = 706/855 (82%), Gaps = 55/855 (6%)
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDG
Sbjct: 1 TKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDG 60
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI
Sbjct: 61 PLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQ 120
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 121 DRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP----- 175
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++V +R++ D
Sbjct: 176 --------------------------------QHVLLRYE------------------DA 185
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQG
Sbjct: 186 YQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQG 245
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTS
Sbjct: 246 DEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTS 305
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAV
Sbjct: 306 FDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAV 365
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGL
Sbjct: 366 KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGL 425
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK
Sbjct: 426 KVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALK 485
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLIL
Sbjct: 486 RTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLIL 545
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEG
Sbjct: 546 VGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEG 605
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 606 SLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTK 665
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+
Sbjct: 666 LLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIIL 725
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLV
Sbjct: 726 SCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLV 785
Query: 934 EGPLNNLKESLILFS 948
EGPLNNL+ESL+ FS
Sbjct: 786 EGPLNNLRESLMQFS 800
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 1291 bits (3341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/984 (65%), Positives = 734/984 (74%), Gaps = 141/984 (14%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQAS----------- 49
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGGGAGAPV 60
Query: 50 ---------QLDSVNQIQVNGKQNL------DNSNLNLVSQKLHELQFEEEEDDGNEFFN 94
QLD+ QV G + + D+S + SQ L EL FEE+E+D ++
Sbjct: 61 GAGPGAAAGQLDA----QVGGPEGILQNGAVDDS-VAKTSQLLAELNFEEDEED--TYYT 113
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGP
Sbjct: 114 KDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGP 173
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LGETVLECY CG RN+F+LGFIPAKADSVVVLLC +P Q
Sbjct: 174 LGETVLECYNCGCRNVFLLGFIPAKADSVVVLLC-SPLTCQE------------------ 214
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLR 274
++N AT +DLEKPGVDE+P
Sbjct: 215 ----------------------------------RENPSATLEDLEKPGVDEEP------ 234
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
++V +R++ D Y
Sbjct: 235 -------------------------------QHVLLRYE------------------DAY 245
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGD 394
QYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGD
Sbjct: 246 QYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGD 305
Query: 395 ELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSF 454
E+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSF
Sbjct: 306 EICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSF 365
Query: 455 DRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK 514
DRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK
Sbjct: 366 DRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVK 425
Query: 515 HAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLK
Sbjct: 426 TVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLK 485
Query: 575 VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKK 634
VVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+
Sbjct: 486 VVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKR 545
Query: 635 NAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILV 694
AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILV
Sbjct: 546 TAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILV 605
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
GDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGS
Sbjct: 606 GDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGS 665
Query: 755 LQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF 814
LQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+
Sbjct: 666 LQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKL 725
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+S
Sbjct: 726 LKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILS 785
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
CVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVE
Sbjct: 786 CVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVE 845
Query: 935 GPLNNLKESLILFSKPKQYFKKNN 958
GPLNNL+ESL+ FSKP++ N
Sbjct: 846 GPLNNLRESLMQFSKPRKLVNTIN 869
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 1282 bits (3318), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/995 (64%), Positives = 754/995 (75%), Gaps = 99/995 (9%)
Query: 5 AYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQA------SQLDSVNQIQ 58
+YGPSSQTLTFL+TEE D G DTQGSEF+F +FTLPSQ+QTQ+ SQL+ +N
Sbjct: 8 SYGPSSQTLTFLETEEADF-GADTQGSEFEFNEFTLPSQTQTQSQASQLNSQLEQINHPI 66
Query: 59 VNG--------------------------KQNLDN------SNLNLVSQKLHELQFEEEE 86
+NG K+ L N S + +++ + +L FEEE+
Sbjct: 67 LNGYPENSTTISVKKGGQEHELLVRKHGNKEKLSNNKEKEDSLVKDLAKSVSDLNFEEED 126
Query: 87 DDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKE 146
+ K LP HAC+YC IHDPA VI+CN+CKKWFCNGRG+TSGSHIINHLVR KHKE
Sbjct: 127 E--ENIAEKVLPSHACRYCSIHDPASVILCNLCKKWFCNGRGNTSGSHIINHLVRGKHKE 184
Query: 147 VTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQE 206
VTLHKDGPLGET LECY CG RN+F+LGFIPAKADSVVVLLCR PCA Q++ +D WDQ
Sbjct: 185 VTLHKDGPLGETQLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCAQQSNKQDSTWDQT 244
Query: 207 QWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDE 266
QW+PLI DR FLSWLVK+P+EQEQ R RQ+++ QI KLEE+WKDN +A +DLEKPGVDE
Sbjct: 245 QWQPLIHDRCFLSWLVKIPSEQEQLRARQISATQINKLEELWKDNPDAVLEDLEKPGVDE 304
Query: 267 DPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 326
+P + V +R++
Sbjct: 305 EP-------------------------------------QAVLLRYE------------- 314
Query: 327 AKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG 386
D YQYQNIFGPLV EA+YDK+LKESQ+Q+N+ VRWD+GLNKK IAYF+ + DG
Sbjct: 315 -----DAYQYQNIFGPLVNHEAEYDKKLKESQSQDNIVVRWDIGLNKKRIAYFNFPRADG 369
Query: 387 DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVD 446
+MRLMQGDEL+LRY+ + K WSG GHV K+P+NFG+EVGLEL+ + G PTE T FSVD
Sbjct: 370 EMRLMQGDELRLRYNGEMRKPWSGEGHVTKVPNNFGEEVGLELRKNDGVPTECTHHFSVD 429
Query: 447 FIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP-KHFSAPNLPDL 505
FIWKSTSFDRMQ A++ FAVD+ SVS YIYH+LLG + F L K FSAP LP+L
Sbjct: 430 FIWKSTSFDRMQYAMKTFAVDETSVSGYIYHKLLGXXXLSISFFFFLIYKRFSAPGLPEL 489
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLT 565
N SQVYAVK +QRPLSLIQGPPGTGKTVTSA+IVY L KQ +LVCAPSNIAVDQLT
Sbjct: 490 NHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSASIVYHLAKQGLGQILVCAPSNIAVDQLT 549
Query: 566 EKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSAD 625
EKIH+TGLKVVR+ AKSREAIDSPV FLALHNQ+RNM+ EL+KL QLK++ GELSS+D
Sbjct: 550 EKIHKTGLKVVRLAAKSREAIDSPVGFLALHNQVRNMDSMPELQKLQQLKDDQGELSSSD 609
Query: 626 EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVP 683
EKRY+ LK +AEK LL +ADVIC TC+GAGDPRL K++F +LIDES QATEPECMVP
Sbjct: 610 EKRYKTLKTSAEKELLQHADVICTTCIGAGDPRLRVAKLRFRCVLIDESTQATEPECMVP 669
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
++ G KQL+LVGDHCQLGPVVMCKKAA AGLSQSLFERLVVLGIRP RL+VQYRMHP LS
Sbjct: 670 IVHGTKQLVLVGDHCQLGPVVMCKKAASAGLSQSLFERLVVLGIRPIRLQVQYRMHPSLS 729
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
+FPSN FY+G+LQNGV ER +DFPWPV DKPM FY T GQEEI+ SGTSY+NRTE
Sbjct: 730 EFPSNLFYDGTLQNGVTVAERSQPGVDFPWPVGDKPMFFYATTGQEEISSSGTSYLNRTE 789
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A+ VEKI TRF+R G+KPEQ+G+ITPYEGQRA++V +MQ+ GSL + +YQ IEVASVDAF
Sbjct: 790 AATVEKIATRFLRAGVKPEQMGIITPYEGQRAYIVAYMQFSGSLHSSLYQNIEVASVDAF 849
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD IIMSC RSN+HQGIGFL DPRRLNVALTR+KYG+I+IGNPKVLSKQPLWN+LL
Sbjct: 850 QGREKDYIIMSCARSNEHQGIGFLKDPRRLNVALTRSKYGLIIIGNPKVLSKQPLWNHLL 909
Query: 924 NFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
N YKE++VLVEGPLNNLKES+I FSKP++ + N
Sbjct: 910 NDYKEKRVLVEGPLNNLKESMIQFSKPRKLVNRTN 944
>gi|351713804|gb|EHB16723.1| Regulator of nonsense transcripts 1 [Heterocephalus glaber]
Length = 1068
Score = 1275 bits (3300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/887 (69%), Positives = 706/887 (79%), Gaps = 61/887 (6%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 48 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 105
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 106 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 165
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 166 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENP 225
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 226 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 248
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 249 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 290
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 291 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 350
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C
Sbjct: 351 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQ 410
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 411 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 470
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 471 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 530
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 531 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 590
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 591 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 650
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 651 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 710
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 711 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 770
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+ G+ +
Sbjct: 771 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARPAHPQPGS--I 828
Query: 913 LSKQ-PLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
S P LL +EQKVLVEG NNL+ESL+ FSKP++ N
Sbjct: 829 WSAAGPDCRALLGL-QEQKVLVEGAANNLRESLMQFSKPRKLVNTIN 874
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/886 (68%), Positives = 699/886 (78%), Gaps = 85/886 (9%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 82 TSQLLAELNFEEDEED--TYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 139
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR P
Sbjct: 140 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRPPP 199
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
+ VK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 200 S----------------------------VKIPSEQEQLRARQITAQQINKLEELWKENP 231
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +DLEKPGVDE+P ++V +R+
Sbjct: 232 SATLEDLEKPGVDEEP-------------------------------------QHVLLRY 254
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLN
Sbjct: 255 E------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLN 296
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
KK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS
Sbjct: 297 KKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSS 356
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH ++V+ +C
Sbjct: 357 VGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEGEDVIIKCQ 416
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVL
Sbjct: 417 LPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 476
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL
Sbjct: 477 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQ 536
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES
Sbjct: 537 QLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDES 596
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL
Sbjct: 597 TQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRL 656
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA
Sbjct: 657 QVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIA 716
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+Y
Sbjct: 717 SSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLY 776
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
QE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK
Sbjct: 777 QEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKA 836
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 837 LSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTVN 882
>gi|449491958|ref|XP_004175605.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Taeniopygia guttata]
Length = 886
Score = 1266 bits (3277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/981 (63%), Positives = 731/981 (74%), Gaps = 129/981 (13%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVN----- 55
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QT +
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGPGQAGPAQGQG 60
Query: 56 ------------QIQVNGKQNL-----DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELP 98
+ QVNG + + N+ SQ L EL FEE+E+D ++ K+LP
Sbjct: 61 PPGAGQGAPGPLEAQVNGPDGILQNGAVDENVAKTSQLLAELNFEEDEED--TYYTKDLP 118
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGET
Sbjct: 119 VHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGET 178
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FL
Sbjct: 179 VLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFL 238
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 239 SWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEP---------- 288
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
++V +R++ D YQYQN
Sbjct: 289 ---------------------------QHVLLRYE------------------DAYQYQN 303
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
IFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRL +GDE+ L
Sbjct: 304 IFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLKEGDEICL 363
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
RY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ
Sbjct: 364 RYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQ 423
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +Q
Sbjct: 424 SALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQ 483
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+
Sbjct: 484 RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRL 543
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+
Sbjct: 544 CAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAER 603
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHC
Sbjct: 604 ELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHC 663
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
G++ LF L+
Sbjct: 664 H-------------GVA-DLFCSLL----------------------------------- 674
Query: 759 VCADERKLSK-IDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
+C+ ++ K DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++
Sbjct: 675 LCSSADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKA 734
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR
Sbjct: 735 GAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVR 794
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPL
Sbjct: 795 ANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPL 854
Query: 938 NNLKESLILFSKPKQYFKKNN 958
NNL+ESL+ FSKP++ N
Sbjct: 855 NNLRESLMQFSKPRKLVNTIN 875
>gi|291243686|ref|XP_002741733.1| PREDICTED: regulator of nonsense transcripts 1-like, partial
[Saccoglossus kowalevskii]
Length = 974
Score = 1253 bits (3242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/825 (72%), Positives = 676/825 (81%), Gaps = 55/825 (6%)
Query: 134 HIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCA 193
HI+NHLVRAK KEVTLHKDGPLGET+LECY CG RN+F+LGFIPAKADSVVVLLCR PCA
Sbjct: 1 HIVNHLVRAKCKEVTLHKDGPLGETILECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCA 60
Query: 194 AQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAE 253
Q+SLKDMNWD QW+PLI DR FLSWLVKVP+E EQ R RQ+++ QI KLEE+WKDN +
Sbjct: 61 TQSSLKDMNWDPTQWQPLIHDRQFLSWLVKVPSEHEQLRARQISAQQINKLEELWKDNPD 120
Query: 254 ATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWD 313
AT +DLEKPGVDE+P V +R++
Sbjct: 121 ATLEDLEKPGVDEEP-------------------------------------SAVLLRYE 143
Query: 314 VGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNK 373
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+ +RWD+GLNK
Sbjct: 144 ------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNIVIRWDIGLNK 185
Query: 374 KSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA 433
K I+YF+ + DGD++LM GDEL+LRY + K WSG+GHV+KIPDN+GDEVG+ELKS+A
Sbjct: 186 KRISYFNFPRRDGDLKLMHGDELRLRYLGELHKPWSGVGHVVKIPDNYGDEVGIELKSNA 245
Query: 434 GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL 493
G PTE T F VDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+EV+ +C+L
Sbjct: 246 GVPTECTHNFVVDFVWKSTSFDRMQSAMKTFAVDETSVSGYIYHKLLGHEVEEVVVKCNL 305
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
PK FSAP LP+LN SQVYAVK +QRPLSLIQGPPGTGKTVTSAT+VY L KQ VLV
Sbjct: 306 PKRFSAPGLPELNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATVVYHLSKQNLGQVLV 365
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQ 613
CAPSNIAVDQLTEKIHRTGLKVVR+CAKSREAIDSPVSFLALHNQ+RNM+ EL+KL Q
Sbjct: 366 CAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDSPVSFLALHNQVRNMDAIPELQKLQQ 425
Query: 614 LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESM 673
LK+ETGELSSADEKRYR LK+N E+ LL NADV+CCTCVGAGDPRL + +F SILIDES
Sbjct: 426 LKDETGELSSADEKRYRSLKRNCERELLQNADVLCCTCVGAGDPRLARFRFRSILIDEST 485
Query: 674 QATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE 733
QATEPECM+P +LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP RL+
Sbjct: 486 QATEPECMIPAVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPIRLQ 545
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
VQYRMHP LS FPSN FYEGSLQNGV ER +DFPWP DKPMLFY T GQEEIA
Sbjct: 546 VQYRMHPILSSFPSNIFYEGSLQNGVTPGERSNKSLDFPWPQTDKPMLFYATTGQEEIAS 605
Query: 794 SGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
SGTSY+NRTEA+NVEKITTRF+RCG++PEQIG+ITPYEGQR+F+VQ+MQ+ GSL AK+YQ
Sbjct: 606 SGTSYLNRTEAANVEKITTRFLRCGIRPEQIGIITPYEGQRSFIVQYMQHNGSLHAKLYQ 665
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
EIE+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTR K+GII++GNPKVL
Sbjct: 666 EIEIASVDAFQGREKDYIILSCVRANEHQGIGFLNDPRRLNVALTRCKFGIIIVGNPKVL 725
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
SKQ LWN+LLN YKEQKVLVEGPLNNLKES+I FSKP++ N
Sbjct: 726 SKQALWNHLLNHYKEQKVLVEGPLNNLKESMIQFSKPRKLINTTN 770
>gi|198435823|ref|XP_002122130.1| PREDICTED: similar to regulator of nonsense transcripts 1 [Ciona
intestinalis]
Length = 1094
Score = 1248 bits (3229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/916 (66%), Positives = 715/916 (78%), Gaps = 74/916 (8%)
Query: 2 SVDAYGPSSQTLTFLDTEETDLI--GGDTQGSEFDFTDFTLPSQSQTQASQ------LDS 53
SVDAYGPSSQTLTFLD +E+ ++ GGDTQ SE+DFTDFT+PSQ+QTQ LD+
Sbjct: 3 SVDAYGPSSQTLTFLDPDESGVLTAGGDTQASEYDFTDFTIPSQTQTQTQTQHSQSQLDA 62
Query: 54 VNQIQVNGKQNLDNS------NLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGI 107
+ Q G D+ N+++ +Q + +L+FEE+ DD + F+ ++LP HAC+YCGI
Sbjct: 63 GDNSQDEGLVGRDDDLGGLQENIHIATQGVADLRFEED-DDEDGFYTRDLPEHACRYCGI 121
Query: 108 HDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGV 167
HDP V+MCN +KWFCNGRG+TSGSHIINHLVRAK KEVT+H+DG LG+++LECY CG
Sbjct: 122 HDPNCVVMCNSTQKWFCNGRGNTSGSHIINHLVRAKCKEVTVHRDGQLGDSMLECYNCGC 181
Query: 168 RNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTE 227
RNIF+LGFIPAKADSVVVLLCR PCA Q SLKDMNWD QW+PLI DR FLSWLVK+P+E
Sbjct: 182 RNIFLLGFIPAKADSVVVLLCRQPCANQTSLKDMNWDASQWQPLIQDRCFLSWLVKIPSE 241
Query: 228 QEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGP 287
+EQ R RQ+T+ QI KLEE+WK+N +AT +DLEKPGVDEDPH
Sbjct: 242 EEQLRARQITAQQINKLEELWKENVDATIEDLEKPGVDEDPHA----------------- 284
Query: 288 LVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLE 347
V +R++ D YQYQNIFGPLVKLE
Sbjct: 285 --------------------VLLRYE------------------DAYQYQNIFGPLVKLE 306
Query: 348 ADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKT 407
ADYD+RLKESQTQ NVT+RWD+GLNKK +A+F L KTD DM+LM+GDE+ LR+
Sbjct: 307 ADYDRRLKESQTQANVTIRWDIGLNKKRLAHFQLPKTDTDMKLMKGDEISLRH---LGTL 363
Query: 408 WSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVD 467
W G GHV+K+PDN DE+ +EL+SS G P + T F VDF+WKSTSFDRMQ A++ FAVD
Sbjct: 364 WEGKGHVVKVPDNSSDEIAIELRSSVGVPLDKTGNFHVDFVWKSTSFDRMQSAMKTFAVD 423
Query: 468 DQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGP 527
+ SVS YIYHRLLGH +E + +LPK FSAP LP+LN SQVYAVK +QRPL LIQGP
Sbjct: 424 EASVSTYIYHRLLGHEAEEQTLKTNLPKRFSAPGLPELNHSQVYAVKTVLQRPLCLIQGP 483
Query: 528 PGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAI 586
PGTGKTVTSATIVY LVK G VLVCAPSNIAVDQLTEKIHRTGLKVVR+CAKSREAI
Sbjct: 484 PGTGKTVTSATIVYHLVKSCGQRQVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAI 543
Query: 587 DSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADV 646
DS VSFL+LHNQ+R+ME EL+KL QLK+ETGELSS DEKRYR LK+NAE+ LL +ADV
Sbjct: 544 DSNVSFLSLHNQVRSMESLPELQKLQQLKDETGELSSNDEKRYRALKRNAERELLQHADV 603
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
IC TCVGAGDPRL++ +F SILIDES QATEPECMVPV+LGA+QLILVGDHCQLGPVVMC
Sbjct: 604 ICSTCVGAGDPRLVRFRFRSILIDESTQATEPECMVPVVLGAQQLILVGDHCQLGPVVMC 663
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
KKAA AGL+QSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A ER
Sbjct: 664 KKAANAGLAQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGERMR 723
Query: 767 SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
+ F WP PDKPM FY T GQEEIA SGTSY+NRTEA+ VE+ITT+F++ G+KPEQIG+
Sbjct: 724 KNLSFVWPSPDKPMFFYKTSGQEEIASSGTSYLNRTEAAVVERITTKFLKSGIKPEQIGI 783
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPYEGQR++LVQ+MQY GSL +K+Y E+E+ASVDAFQGREKD II+SCVR+N+HQGIGF
Sbjct: 784 ITPYEGQRSYLVQYMQYSGSLHSKLYMEVEIASVDAFQGREKDFIILSCVRANEHQGIGF 843
Query: 887 LNDPRRLNVALTRAKY 902
LNDPRRLNVALTRA++
Sbjct: 844 LNDPRRLNVALTRARW 859
>gi|390344703|ref|XP_786803.3| PREDICTED: regulator of nonsense transcripts 1-like
[Strongylocentrotus purpuratus]
Length = 1386
Score = 1243 bits (3215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/855 (68%), Positives = 688/855 (80%), Gaps = 57/855 (6%)
Query: 104 YCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY 163
YCGIHDPA V++CN KKWFCNGRG+TSGSHIINHLVRAK KEVTLHKD PLGETVLECY
Sbjct: 343 YCGIHDPAAVVLCNGTKKWFCNGRGNTSGSHIINHLVRAKCKEVTLHKDSPLGETVLECY 402
Query: 164 TCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVK 223
CG RN+F+LGFIPAKADSVVVLLCR PCA Q++LKDMNWD QW+PLI DR FL WLVK
Sbjct: 403 NCGCRNVFLLGFIPAKADSVVVLLCRQPCATQSNLKDMNWDPSQWQPLIQDRCFLKWLVK 462
Query: 224 VPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQN 283
+PTEQEQ R RQ++++Q+ +LEE+WK+N EAT +DLEKPGVDE+P
Sbjct: 463 IPTEQEQLRARQISASQLNRLEELWKENPEATLEDLEKPGVDEEP--------------- 507
Query: 284 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPL 343
+V +R++ D Y YQNIFGPL
Sbjct: 508 ----------------------ASVMLRYE------------------DAYMYQNIFGPL 527
Query: 344 VKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYD 403
VK+EADYD++LKE+QTQE VTVRWD+GLN+K+ A F+ K + D++LM GDEL++RY+ D
Sbjct: 528 VKMEADYDRKLKETQTQEGVTVRWDIGLNRKTRATFNFPKKE-DLKLMHGDELRVRYT-D 585
Query: 404 ASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRK 463
+ WSGL HV+K PDN+ DE+ +ELKS + P + TT F+VDF+WKSTSFDRMQ AL+
Sbjct: 586 PREPWSGLAHVVKTPDNYSDEICVELKSGSNIPVKFTTNFAVDFVWKSTSFDRMQNALKT 645
Query: 464 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 523
AVDD +VS+Y+YHRLLGH+V+ ++ +C+LPK FSA LP+LN SQV AV+ + RPLSL
Sbjct: 646 LAVDDTAVSSYLYHRLLGHDVENLVLKCNLPKRFSAQGLPELNHSQVSAVRTVLTRPLSL 705
Query: 524 IQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR 583
IQGPPGTGKTVTSA+IVY L KQ VLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSR
Sbjct: 706 IQGPPGTGKTVTSASIVYHLAKQGTGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLCAKSR 765
Query: 584 EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDN 643
EAIDSPVSFL+LHNQ+RNME E++KL LK+E GELSS DEKRYR LK+N E+ LL N
Sbjct: 766 EAIDSPVSFLSLHNQVRNMEGAEEMQKLQALKDEMGELSSNDEKRYRTLKRNCERELLQN 825
Query: 644 ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPV 703
ADVICCTCVGAGDPR + +F ++LIDES Q+TEPEC++P +LG++QL+LVGDHCQLGPV
Sbjct: 826 ADVICCTCVGAGDPRFARFRFRAVLIDESTQSTEPECLIPAVLGSRQLVLVGDHCQLGPV 885
Query: 704 VMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
VMCKKAA AGL QSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A E
Sbjct: 886 VMCKKAANAGLCQSLFERLVVLGIRPIRLQVQYRMHPSLSAFPSNIFYEGSLQNGVTAAE 945
Query: 764 RKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ 823
R +DFP+P PDKPM FY T GQEEIA SGTSY+NRTEASNVEK+TTRF+R G+KPEQ
Sbjct: 946 RINRAVDFPFPQPDKPMFFYATTGQEEIASSGTSYLNRTEASNVEKLTTRFLRAGVKPEQ 1005
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
IG+ITPYEGQRAF+VQ+MQY G L K+YQE+E+ASVDAFQGREKD II+SCVR+NDHQG
Sbjct: 1006 IGIITPYEGQRAFIVQYMQYSGPLNVKLYQEVEIASVDAFQGREKDYIILSCVRANDHQG 1065
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
IGFLNDPRRLNVALTR +YG+I++GNPKVLS+ PLWN+LL++YKEQKVLVEGPLNNLKES
Sbjct: 1066 IGFLNDPRRLNVALTRGRYGVIIVGNPKVLSRHPLWNHLLSYYKEQKVLVEGPLNNLKES 1125
Query: 944 LILFSKPKQYFKKNN 958
LI FSKP++ +N
Sbjct: 1126 LIQFSKPRKLINPSN 1140
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/338 (68%), Positives = 277/338 (81%), Gaps = 10/338 (2%)
Query: 2 SVDAYGPSSQTL-TFLDTEETDLIGGDTQGSEFDFT--DFTLPSQ---SQTQASQLD--S 53
SVDAYGPSSQ+L TFLD EE DL+G DTQG++FD+ DFTLPSQ SQ+QASQLD S
Sbjct: 4 SVDAYGPSSQSLLTFLDAEEHDLLGADTQGTDFDYNVGDFTLPSQTQASQSQASQLDLAS 63
Query: 54 VNQIQVNGKQ-NLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAY 112
+Q QV+ Q N + + V Q++ EL FEE+E+D +K+LP HACKYCGIHDPA
Sbjct: 64 QSQSQVDASQTNGIDEAVAAVEQQVKELTFEEDEEDAT-VLSKDLPNHACKYCGIHDPAA 122
Query: 113 VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFV 172
V++CN KKWFCNGRG+TSGSHIINHLVRAK KEVTLHKD PLGETVLECY CG RN+F+
Sbjct: 123 VVLCNGTKKWFCNGRGNTSGSHIINHLVRAKCKEVTLHKDSPLGETVLECYNCGCRNVFL 182
Query: 173 LGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQR 232
LGFIPAKADSVVVLLCR PCA Q++LKDMNWD QW+PLI DR FL WLVK+PTEQEQ R
Sbjct: 183 LGFIPAKADSVVVLLCRQPCATQSNLKDMNWDPSQWQPLIQDRCFLKWLVKIPTEQEQLR 242
Query: 233 GRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLE 292
RQ++++Q+ +LEE+WK+N EAT +DLEKPGVDE+P V+LRYED Y YQNIFGPLVK+E
Sbjct: 243 ARQISASQLNRLEELWKENPEATLEDLEKPGVDEEPASVMLRYEDAYMYQNIFGPLVKME 302
Query: 293 ADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
ADYD++LKE+QTQE VTVRWD+GLN+K+ A F+ K +
Sbjct: 303 ADYDRKLKETQTQEGVTVRWDIGLNRKTRATFNFPKKE 340
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 1191 bits (3081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/991 (58%), Positives = 724/991 (73%), Gaps = 110/991 (11%)
Query: 9 SSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDS--------------- 53
SSQ +FL+ TQGSE+D+ +FT S + +QAS L
Sbjct: 27 SSQDFSFLEIP--------TQGSEYDYPEFTNTSATASQASALGDDGSQSQLSSVSSTYP 78
Query: 54 ------VNQIQVNGKQNLDNS--------------NLNLVSQKLHELQFEE--EEDD-GN 90
+ + +G Q+L + +++ + L +L FEE E+DD
Sbjct: 79 FSSSSMASSLHNDGTQHLASQHLHHHHAHGMMLPHDVDTAADALRDLHFEEAFEDDDLAG 138
Query: 91 EFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKHKEVT 148
E FNK+LPPHAC YCG+H+PA V+ CN+ C+KWFCNGRG TSGSHIINHLVRAKHKEV
Sbjct: 139 EDFNKKLPPHACNYCGVHNPACVVRCNVPSCRKWFCNGRGSTSGSHIINHLVRAKHKEVC 198
Query: 149 LHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQW 208
LH D PLG+T+LECY CG +N+F+LGFIPAK +SVVVLLCR PCA LKDMNWD QW
Sbjct: 199 LHADSPLGDTILECYNCGCKNVFLLGFIPAKTESVVVLLCRDPCANATGLKDMNWDLAQW 258
Query: 209 KPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDP 268
PLI DR FL WLVK+P+EQEQ R RQV++ QI KLEE+W+ N EA +DL+KPGVD++P
Sbjct: 259 LPLIDDRCFLPWLVKMPSEQEQLRARQVSAQQINKLEELWRANPEAVVEDLQKPGVDDEP 318
Query: 269 HQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 328
+ +V +R++
Sbjct: 319 N-------------------------------------SVLLRYE--------------- 326
Query: 329 TDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDM 388
D YQYQNIFGPLVKLEA+YDKR+KESQTQ+ V++RWD+GLNKK +AYF K+D ++
Sbjct: 327 ---DAYQYQNIFGPLVKLEAEYDKRMKESQTQQGVSIRWDMGLNKKRVAYFLFPKSDNEL 383
Query: 389 RLMQGDELKLRYSYDAS-KTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDF 447
RL+ GDEL+LR+ D S W+ +GHV+++ N +EV LEL+S+ GAP + + GFSVDF
Sbjct: 384 RLVPGDELRLRHPGDGSHAAWNCVGHVVRLTTN--EEVALELRSNVGAPIDLSHGFSVDF 441
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+WK+TSFDRMQ A++ FAVDDQS+S Y+YHR LGH V+E FR LPK FSAP LP+LN
Sbjct: 442 VWKATSFDRMQGAMKTFAVDDQSLSGYLYHRFLGHEVEEQTFRVTLPKRFSAPGLPELNH 501
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQV AVK +Q+PLSLIQGPPGTGKTVTSA+ VYQLVKQ VLVCAPSN+AVDQLTEK
Sbjct: 502 SQVAAVKSVLQKPLSLIQGPPGTGKTVTSASTVYQLVKQNQGQVLVCAPSNVAVDQLTEK 561
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS----ELKKLLQLKEETGELSS 623
IH TGLKVVR+CAKSREA+ SPV FL LH ++++ S EL KL QLK++ GELSS
Sbjct: 562 IHATGLKVVRLCAKSREAVSSPVEFLTLHYLVKHLASGSIDKGELAKLQQLKDDQGELSS 621
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
ADEK+++ LK++ E+ +L +ADVICCTCVGAGDPRL +F +LIDES QATEPEC++P
Sbjct: 622 ADEKKFKSLKRSMEREILQSADVICCTCVGAGDPRLTNFRFRQVLIDESTQATEPECLLP 681
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
++LGAKQ+I VGDHCQLGPV+MCKKAARAGLSQSLFERL++LG+RP RL+VQYRMHP LS
Sbjct: 682 LVLGAKQVIFVGDHCQLGPVIMCKKAARAGLSQSLFERLIMLGVRPIRLQVQYRMHPCLS 741
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
+FPSN FYEG+LQNGV A ER +DFPWPVP+KPM FY GQEEI+ SGTSY+NR E
Sbjct: 742 EFPSNTFYEGTLQNGVTAAERNQGALDFPWPVPNKPMFFYNCLGQEEISSSGTSYLNRNE 801
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A+ EKI T F++ G+ QIGVITPYEGQRA+LV +MQ GSL +++Y+EIEVASVD+F
Sbjct: 802 AAVCEKIVTHFLQAGVTSAQIGVITPYEGQRAYLVNYMQRNGSLRSQLYKEIEVASVDSF 861
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++V+GN KVLS+QPLWNNLL
Sbjct: 862 QGREKDFIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVVLGNAKVLSRQPLWNNLL 921
Query: 924 NFYKEQKVLVEGPLNNLKESLILFSKPKQYF 954
+KE LVEGPLNNLK+S++ F++P++Y+
Sbjct: 922 VHFKENGCLVEGPLNNLKQSMVQFARPRKYY 952
>gi|440904008|gb|ELR54581.1| Regulator of nonsense transcripts 1 [Bos grunniens mutus]
Length = 1156
Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 589/900 (65%), Positives = 679/900 (75%), Gaps = 79/900 (8%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 128 TSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 185
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR P
Sbjct: 186 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRLPQ 245
Query: 193 AAQNSLKDMNWDQEQWKPLIADR--SFLSWLVKVPTEQEQQRGR---------QVTSAQI 241
+ +S +N PL F W V + + G Q + Q+
Sbjct: 246 LSHSSCLYLN------SPLTCQERVCFSFWCSVVGSGGNGEAGLPFCLHTWGIQCSFWQL 299
Query: 242 AKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKE 301
++ +N AT +DLEKPGVDE+P
Sbjct: 300 GRITS--PENPSATLEDLEKPGVDEEP--------------------------------- 324
Query: 302 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQE 361
++V +R++ D YQYQNIFGPLVKLEADYDK+LKESQTQ+
Sbjct: 325 ----QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQD 362
Query: 362 NVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNF 421
N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+
Sbjct: 363 NITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNY 422
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLG
Sbjct: 423 GDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLG 482
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVY 541
H V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY
Sbjct: 483 HEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVY 542
Query: 542 QLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN 601
L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRN
Sbjct: 543 HLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRN 602
Query: 602 MEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
M+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K
Sbjct: 603 MDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAK 662
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFER
Sbjct: 663 MQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFER 722
Query: 722 LVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
LVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM
Sbjct: 723 LVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMF 782
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+M
Sbjct: 783 FYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYM 842
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
Q+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+
Sbjct: 843 QFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAR 902
Query: 902 YGIIVIGNPKVLSKQPLWNNLL---NFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
YG + + P + L +YKEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 903 YGELSLAGPCRGGPSCIGGFLRCWEGYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 962
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 1182 bits (3058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/955 (59%), Positives = 701/955 (73%), Gaps = 68/955 (7%)
Query: 7 GPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLD 66
G S TFL+ DTQ S++DF DFT QT + ++ K +
Sbjct: 6 GASQDDFTFLE------YSADTQSSQYDFNDFT-----QTPKENEIDLPISSLSLKDEGE 54
Query: 67 NSNLNLVSQKLHELQFEEEEDDG---NEFFNKELPPHACKYCGIHDPAYVIMCNICKKWF 123
N+ N + +++ QFE+ +D G N K LPPHACKYCGIH PA V+ C C +WF
Sbjct: 55 NAVANGTTSFVNDFQFEDTDDFGEIANSSEEKNLPPHACKYCGIHSPASVVKCVTCDRWF 114
Query: 124 CNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSV 183
CN RG+TSGSHIINHLVRAKHKEV LH + PLG+T+LECY CG RN+F+LGFIPAK+D+V
Sbjct: 115 CNSRGNTSGSHIINHLVRAKHKEVALHPESPLGDTILECYNCGCRNVFLLGFIPAKSDTV 174
Query: 184 VVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAK 243
VVL+CR PCAA S KDMNWD QW PLI DR FL+WLVK+P++QEQ R RQ+TS QI K
Sbjct: 175 VVLICRQPCAAVPSSKDMNWDTTQWMPLIDDRCFLTWLVKIPSDQEQLRARQITSQQINK 234
Query: 244 LEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQ 303
LEE+WK+N EAT +DLEKPGVD++PH VLLRYED YQYQNIFGPLV +EADYDK+LKESQ
Sbjct: 235 LEELWKENGEATLEDLEKPGVDDEPHPVLLRYEDAYQYQNIFGPLVMMEADYDKKLKESQ 294
Query: 304 TQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV 363
T +++ VRWDVGLN+K+IA+F K +
Sbjct: 295 TCDDIVVRWDVGLNQKNIAWFYFPKLE--------------------------------- 321
Query: 364 TVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGD 423
+ LA D ++RL RY + + W GHVIKIP+N D
Sbjct: 322 ------------LGEIKLAVGD-ELRL--------RYRGELHEPWEATGHVIKIPNNISD 360
Query: 424 EVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN 483
EV LE+ P E T FSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYHRLLGH+
Sbjct: 361 EVALEISRGGKPPIECTHNFSVDFVWKSTSFDRMQSAMKTFAVDETSVSGYIYHRLLGHD 420
Query: 484 VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL 543
V+ + + +PK FSAPNLP+LN SQVYAVK +Q+PLSLIQGPPGTGKTVTSA+IVY L
Sbjct: 421 VEPQILKTQMPKRFSAPNLPELNHSQVYAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHL 480
Query: 544 VKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNME 603
K VLVCAPSN+AVDQL EKIH+TGLKVVRV AKSRE +DSPVSFL LH Q++N +
Sbjct: 481 AKMNPGQVLVCAPSNVAVDQLAEKIHQTGLKVVRVTAKSREELDSPVSFLTLHEQVQNND 540
Query: 604 MNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
N EL+KL+ LK + GELS+ADE++Y LK+ EK +L NADVICCT VGAGD R+ ++
Sbjct: 541 TNVELQKLIHLKRDQGELSAADERKYNALKRACEKEILANADVICCTSVGAGDSRIANLR 600
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++LIDE+ QA+EPECM+P++LG KQ +LVGDH QLGP++M KKAARAGL QSLFERLV
Sbjct: 601 FRTVLIDEATQASEPECMIPLVLGCKQAVLVGDHQQLGPIIMNKKAARAGLCQSLFERLV 660
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY 783
+LGIRP RL+VQYRMHP LS+FPSN FYEG+LQNG+ ER IDFPWPV + PM+FY
Sbjct: 661 ILGIRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGITTQERIRKDIDFPWPVLETPMMFY 720
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQY 843
G EEI+ SGTSY+NRTEASN EKI TRF++ G+ P QIGV+TPYEGQR+++VQ+MQ+
Sbjct: 721 ANLGNEEISTSGTSYLNRTEASNCEKIVTRFMKSGVMPSQIGVVTPYEGQRSYIVQYMQF 780
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
GSL +Y+EIEVASVDAFQGREKD II+SCVRSN+HQGIGFL+DPRRLNVALTRAKYG
Sbjct: 781 NGSLRKDLYKEIEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRAKYG 840
Query: 904 IIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
++++GNPK+LS+ PLW++LL YKE+ LV+G LNNL+ S+I F++P++ ++K++
Sbjct: 841 VVILGNPKILSRHPLWHHLLVHYKEKGCLVDGALNNLRVSMIQFNRPRKTYRKDD 895
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 1180 bits (3053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/882 (63%), Positives = 671/882 (76%), Gaps = 58/882 (6%)
Query: 77 LHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHII 136
L+E F+ DD N +ELPPHAC YCGIH+PA V+ C IC KWFCN RG TSGSHI+
Sbjct: 92 LYEEDFDGMLDDLNR---EELPPHACSYCGIHNPACVVRCLICNKWFCNARGSTSGSHIV 148
Query: 137 NHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQN 196
NHLVRAKHKEVTLH + PLGET ECY+CG +N+F+LGFIPAK+D+VVVLLCR PCAA
Sbjct: 149 NHLVRAKHKEVTLHAESPLGETTPECYSCGAKNVFILGFIPAKSDTVVVLLCRQPCAAMQ 208
Query: 197 SLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATF 256
S KD+ WD QW PLI DRSFLSWLVKVP+EQEQ R +Q+T QI +LEE+W+DNA AT
Sbjct: 209 SSKDIVWDTTQWSPLIEDRSFLSWLVKVPSEQEQLRAKQITFHQINRLEELWRDNANATL 268
Query: 257 QDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGL 316
+DLEKPGVD++P +LLRYED YQYQNIFGPLVK+EADYDKRLKESQTQ+ + VRWD+GL
Sbjct: 269 EDLEKPGVDDEPQPILLRYEDAYQYQNIFGPLVKIEADYDKRLKESQTQDGLVVRWDMGL 328
Query: 317 NKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 376
N+K IA+F+L K E+ VR VG
Sbjct: 329 NQKRIAWFNLPKL-------------------------------ESGEVRLAVG------ 351
Query: 377 AYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAP 436
DEL+LRY+ + K W G+GHVIK+P+N DE+ LELK S P
Sbjct: 352 -----------------DELRLRYNGELHKPWEGVGHVIKVPNNVSDEIALELKRSDHVP 394
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEV-LFRCHLPK 495
+ T FS DF+WKSTSFDRMQ A+R FAVD+QSVS YIYH+L+GH+ D + R +PK
Sbjct: 395 IDCTHNFSADFVWKSTSFDRMQQAMRTFAVDEQSVSGYIYHKLMGHDADPPQVLRAQMPK 454
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
SAPNLPDLN SQ+YAVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLV A
Sbjct: 455 RVSAPNLPDLNHSQIYAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVAA 514
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
PSN+AVDQLTEKIH+TGLKVVRV AKSREA++S VSFL LH Q+ N + + EL KL+QLK
Sbjct: 515 PSNVAVDQLTEKIHQTGLKVVRVTAKSREALESSVSFLTLHAQVANSDTHPELSKLIQLK 574
Query: 616 EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQA 675
+E GELSS+DE++++ L + EK +L NADVIC TCVG GDPRL +KF ++LIDE+ QA
Sbjct: 575 QEQGELSSSDERKFKALTRMVEKEILTNADVICATCVGCGDPRLKNLKFRTVLIDEATQA 634
Query: 676 TEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQ 735
TEPECM+P+ G KQL++VGDH QLGP +M KKAARAGL+QSLFERL++LG RP RL+VQ
Sbjct: 635 TEPECMIPLTFGVKQLVMVGDHSQLGPTIMNKKAARAGLNQSLFERLILLGNRPIRLQVQ 694
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSG 795
YRMHP LS+FPSN FYEG+LQNGV A ER +DFPWP P PM F+ GQEEI+ SG
Sbjct: 695 YRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPQPTTPMYFHQNLGQEEISSSG 754
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
TS++NRTEASNVEKI TRF + G+ P QIG+ITPYEGQR++LV +MQ GSL ++Y+EI
Sbjct: 755 TSFLNRTEASNVEKIVTRFFKAGVMPSQIGIITPYEGQRSYLVSYMQMNGSLKKELYKEI 814
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
EVASVDAFQGREKD +IMSCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK
Sbjct: 815 EVASVDAFQGREKDYVIMSCVRSNEHQGIGFLNDPRRLNVALTRAKYGLVILGNPKVLSK 874
Query: 916 QPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
LW+ LL YKE+K LVEGPLNNL+ S+I FSKP++ + +N
Sbjct: 875 HALWHYLLTHYKEKKCLVEGPLNNLQPSMIQFSKPRRPYDRN 916
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 1174 bits (3037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/890 (62%), Positives = 682/890 (76%), Gaps = 67/890 (7%)
Query: 80 LQFEE-----EEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSG 132
L FEE +DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSG
Sbjct: 131 LSFEEPVGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSG 190
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AK+++VVVLLCR PC
Sbjct: 191 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKSENVVVLLCREPC 250
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
+ N+LKDMNWD QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N
Sbjct: 251 LSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNP 310
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
+A+ +DLEKPGVD++P ++V +++
Sbjct: 311 DASLEDLEKPGVDDEP-------------------------------------QSVVLKY 333
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQN+F PL+KLEADYDK +KESQ+++NVTVRWD+GLN
Sbjct: 334 E------------------DAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLN 375
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKIPDNFGDEVGLELKS 431
KK +AYF K D ++RL+ GDEL+LRY D+S TW +GHVIK+ +EV LEL++
Sbjct: 376 KKRVAYFVFPKEDNELRLVPGDELRLRYPGDSSHPTWQSVGHVIKLTAQ--EEVALELRA 433
Query: 432 SAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC 491
S G PTE GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R
Sbjct: 434 SQGVPTELNVGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRN 493
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
LP+ F AP LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ V
Sbjct: 494 TLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQV 553
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELK 609
LVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SEL
Sbjct: 554 LVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 613
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
KL QLK+E GELSS+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LI
Sbjct: 614 KLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLI 673
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
DES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++P
Sbjct: 674 DESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKP 733
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
FRL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ S IDFPWPVP++PM FYV GQE
Sbjct: 734 FRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQE 793
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
EI+ SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL
Sbjct: 794 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQ 853
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GN
Sbjct: 854 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 913
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
PKVLSKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 914 PKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 963
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/876 (63%), Positives = 668/876 (76%), Gaps = 56/876 (6%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
F+ DD + +LPPHAC YCGIH PA V+ C IC KWFCN RG+TS SHI+NHLVR
Sbjct: 77 FDAVLDDLKDEAEVDLPPHACSYCGIHSPASVVKCLICSKWFCNSRGNTSASHIVNHLVR 136
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
AKHKEV LH + PLGET ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA + KD+
Sbjct: 137 AKHKEVILHAESPLGETTPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAIS--KDI 194
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
+W+ W PLI DRSFLSWLVK P+EQEQ R RQ++ QI +LE++W++NA AT +DLEK
Sbjct: 195 SWNASLWAPLIDDRSFLSWLVKPPSEQEQLRSRQISFNQINRLEDLWRENANATLEDLEK 254
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
PGVD++P +LLRYED YQYQNIFGPLVK+EADYDK+LKESQTQ ++TVRWD+GLN+K +
Sbjct: 255 PGVDDEPQPILLRYEDAYQYQNIFGPLVKIEADYDKKLKESQTQTDITVRWDLGLNQKRV 314
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
A+F L K E+ VR V
Sbjct: 315 AWFCLPKL-------------------------------ESGEVRLAV------------ 331
Query: 382 AKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATT 441
GDEL+LRY + K W G+GHVIKIP+N DE+GLEL+ S G P+E T
Sbjct: 332 -----------GDELRLRYQGELHKAWEGVGHVIKIPNNVSDEIGLELRRSDGVPSECTH 380
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
F+ DF+WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH V+ R +PK FSAP
Sbjct: 381 NFAADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGHEVEAQSLRTQMPKRFSAPG 440
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
LP+LN SQ+YAVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+AV
Sbjct: 441 LPELNHSQMYAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAV 500
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
DQLTEKIH TGLKVVR+ AKSREA+DS V+FL LH Q+ N + EL+KL+QLK E GEL
Sbjct: 501 DQLTEKIHATGLKVVRLTAKSREALDSSVNFLTLHQQVANSTTHIELQKLIQLKNEQGEL 560
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
SS DE++Y+ L + EK +L ADVICCTCVGAGDPRL K++F ++LIDE+ QA EPECM
Sbjct: 561 SSNDERKYKTLIRQCEKEILGAADVICCTCVGAGDPRLSKLRFRTVLIDEATQAAEPECM 620
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPE 741
+P++LG KQ+++VGDH QLGPV+M KKAARAGL+QSLFERLV+LG RP RL+VQYRMHP
Sbjct: 621 IPLVLGCKQVVMVGDHQQLGPVIMNKKAARAGLTQSLFERLVLLGNRPIRLQVQYRMHPC 680
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
LS+FPSN FYEGSLQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++NR
Sbjct: 681 LSEFPSNMFYEGSLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLNR 740
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
TEASNVEKI T+F + G+ P QIGV+TPYEGQR+++V +MQ+ GSL +Y+EIEVASVD
Sbjct: 741 TEASNVEKIVTKFFKSGVVPNQIGVVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASVD 800
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
AFQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW+
Sbjct: 801 AFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHY 860
Query: 922 LLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
LL YKE VLVEGPLNNL+ S+I FSKP++ K+
Sbjct: 861 LLTHYKESNVLVEGPLNNLQPSMIQFSKPRRSLVKS 896
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/881 (62%), Positives = 676/881 (76%), Gaps = 63/881 (7%)
Query: 80 LQFEEEED-DGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHII 136
L FEE D DG EF + HAC+YCG+ +PA V+ CNI C+KWFCN RG+TSGSHI+
Sbjct: 124 LNFEETGDEDGYEFGKGDFTEHACRYCGVSNPACVVRCNIPSCRKWFCNSRGNTSGSHIV 183
Query: 137 NHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQN 196
NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AK +SVVVLLCR PC N
Sbjct: 184 NHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNVN 243
Query: 197 SLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATF 256
+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R RQ+++ QI K+EE+WK N +AT
Sbjct: 244 ALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDATL 303
Query: 257 QDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGL 316
+DLEKPG+D++P ++V ++++
Sbjct: 304 EDLEKPGIDDEP-------------------------------------QSVALKYE--- 323
Query: 317 NKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 376
D YQYQN+F PL+KLEADYDK +KESQ+++NVT+RWD+GLNKK I
Sbjct: 324 ---------------DAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGLNKKRI 368
Query: 377 AYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKIPDNFGDEVGLELKSSAGA 435
AYF K D ++RL+ GDEL+LRYS DA+ W +GHVIK+ +EV LEL++S G
Sbjct: 369 AYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQ--EEVALELRASQGV 426
Query: 436 PTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPK 495
P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ R LP+
Sbjct: 427 PVDINHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVENQNVRNTLPR 486
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGKTVTSA IVY + KQ VLVCA
Sbjct: 487 RFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 546
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQ 613
PSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SEL KL Q
Sbjct: 547 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 606
Query: 614 LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESM 673
LK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGAGDPRL +F +LIDES
Sbjct: 607 LKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDEST 666
Query: 674 QATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE 733
QATEPEC++P++LGAKQ+ILVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++P RL+
Sbjct: 667 QATEPECLIPLVLGAKQVILVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQ 726
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
VQYRMHP LS+FPSN FYEG+LQNGV +ER+ S IDFPWPVP++PM FYV GQEEI+
Sbjct: 727 VQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISA 786
Query: 794 SGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M G+L ++Y+
Sbjct: 787 SGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK 846
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GNPKVL
Sbjct: 847 EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 906
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYF 954
SKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ +
Sbjct: 907 SKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIY 947
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1253
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/964 (58%), Positives = 707/964 (73%), Gaps = 89/964 (9%)
Query: 27 DTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSN----------------- 69
+TQG +FD+ DF P +S A S + +G D+ +
Sbjct: 28 NTQGEDFDYPDFRDPIRSPV-AWPTPSDSLADPSGSAGSDHHSDASPVSAAPTKGGRSGG 86
Query: 70 --------LNLVSQKLHELQFEEEEDDGN-EFFNKELPPHACKYCGIHDPAYVIMCNI-- 118
++ ++ + L FE+ DD N EF + HAC+YCG+ +PA V+ CN+
Sbjct: 87 GSGSGSQMVDSLASGMSGLNFEDTGDDDNYEFGKGDFTEHACRYCGVSNPACVVRCNVPS 146
Query: 119 CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPA 178
C+KWFCN RG+TSGSHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI A
Sbjct: 147 CRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISA 206
Query: 179 KADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTS 238
K +SVVVLLCR PC + N+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R RQ+++
Sbjct: 207 KTESVVVLLCREPCLSVNALKDMNWDLTQWCPLIDDRCFLQWLVKIPSEQEQLRARQISA 266
Query: 239 AQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKR 298
QI K+EE+WK N +A+F+DLEKPGVD++P
Sbjct: 267 QQINKVEELWKTNPDASFEDLEKPGVDDEP------------------------------ 296
Query: 299 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQ 358
++V ++++ D YQYQN+F PL+KLEADYDK +KESQ
Sbjct: 297 -------QSVALKYE------------------DAYQYQNVFAPLIKLEADYDKMMKESQ 331
Query: 359 TQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKI 417
+++N+T+RWD+GLNKK +AYF K D ++RL+ GDEL+LRYS DA+ +W +GHVIK+
Sbjct: 332 SKDNLTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPSWQSVGHVIKL 391
Query: 418 PDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
+EV LEL++S G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH
Sbjct: 392 TAQ--EEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYH 449
Query: 478 RLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLGH V+ + R LP+ F AP LP+LN SQVYAVK +QRP+SLIQGPPGTGKTVTSA
Sbjct: 450 HLLGHEVEVQMVRNALPRRFGAPGLPELNASQVYAVKSVLQRPISLIQGPPGTGKTVTSA 509
Query: 538 TIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHN 597
+VY + KQ VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH
Sbjct: 510 ALVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHY 569
Query: 598 QIRNMEMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG 655
Q+R+++ + SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGAG
Sbjct: 570 QVRHLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAG 629
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
DPRL +F +LIDES QATEPEC++P++LGAKQ++LVGDHCQLGPV+MCKKAARAGL+
Sbjct: 630 DPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLA 689
Query: 716 QSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ + IDFPWPV
Sbjct: 690 QSLFERLVLLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPV 749
Query: 776 PDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRA 835
P++PM FYV GQEEI+ SGTSY+NRTEA+NVEKI T F++ G+ P QIGVITPYEGQRA
Sbjct: 750 PNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRA 809
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
++V +M G+L ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNV
Sbjct: 810 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 869
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
ALTRA+YGI+++GNPKVLSKQPLWN LL YKE + LVEGPLNNLK+S++ F KPK+ +
Sbjct: 870 ALTRARYGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYN 929
Query: 956 KNNM 959
+ +
Sbjct: 930 ERRL 933
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/896 (61%), Positives = 686/896 (76%), Gaps = 63/896 (7%)
Query: 70 LNLVSQKLHELQFEEEEDDGN-EFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNG 126
++ ++ + L FE+ DD N E+ + HAC+YCG+ +PA V+ CN+ C+KWFCN
Sbjct: 101 VDALAAGMSGLNFEDTGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNS 160
Query: 127 RGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVL 186
RG+TSGSHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AK +SVVVL
Sbjct: 161 RGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVL 220
Query: 187 LCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEE 246
LCR PC + N+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R RQ+++ QI K+EE
Sbjct: 221 LCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEE 280
Query: 247 VWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
+WK N +A+F+DLEKPGVD++P +
Sbjct: 281 LWKTNPDASFEDLEKPGVDDEP-------------------------------------Q 303
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 366
+V ++++ D YQYQN+F PL+KLEADYDK +KESQ+++NVT+R
Sbjct: 304 SVALKYE------------------DAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIR 345
Query: 367 WDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKIPDNFGDEV 425
WD+GLNKK +AYF K D ++RL+ GDEL+LRYS DA+ W +GHVIK+ +EV
Sbjct: 346 WDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQ--EEV 403
Query: 426 GLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 485
LEL++S G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+
Sbjct: 404 ALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE 463
Query: 486 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK 545
+ R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGKTVTSA +VY + K
Sbjct: 464 VQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAK 523
Query: 546 QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN 605
Q VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ +
Sbjct: 524 QGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTS 583
Query: 606 --SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGAGDPRL +
Sbjct: 584 DKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR 643
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F +LIDES QATEPEC++P++LGAKQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV
Sbjct: 644 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 703
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY 783
+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ERK S IDFPWPVP++PM FY
Sbjct: 704 LLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERKSSGIDFPWPVPNRPMFFY 763
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQY 843
V GQEEI+ SGTSY+NRTEA+NVEKI T F++ G+ P QIGVITPYEGQRA++V +M
Sbjct: 764 VQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSR 823
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
G+L ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YG
Sbjct: 824 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 883
Query: 904 IIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
I+++GNPKVLSKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ + + +
Sbjct: 884 IVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRL 939
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/890 (62%), Positives = 678/890 (76%), Gaps = 67/890 (7%)
Query: 80 LQFEE-----EEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSG 132
L FEE +DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSG
Sbjct: 137 LSFEEPLGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSG 196
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AKA++VVVLLCR PC
Sbjct: 197 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPC 256
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
+ N+LKDMNWD QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N
Sbjct: 257 LSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNP 316
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
+A+ +DLEKPGVD++P Q V +++
Sbjct: 317 DASLEDLEKPGVDDEPQQ-------------------------------------VALKY 339
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQN+F PL+KLEADYDK +KESQ+++++TVRWD+GLN
Sbjct: 340 E------------------DAYQYQNVFAPLIKLEADYDKMMKESQSKDSLTVRWDIGLN 381
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKIPDNFGDEVGLELKS 431
KK IAYF K D ++RL+ GDEL+LRYS D+S W +GHVIK+ +EV LEL++
Sbjct: 382 KKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGHVIKLTAQ--EEVALELRA 439
Query: 432 SAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC 491
S G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R
Sbjct: 440 SQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRN 499
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
LP+ F AP LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ V
Sbjct: 500 TLPRRFGAPGLPELNASQVLAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV 559
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELK 609
LVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SEL
Sbjct: 560 LVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 619
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
KL QLK+E GELSS+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LI
Sbjct: 620 KLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANFRFRQVLI 679
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
DES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++P
Sbjct: 680 DESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKP 739
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
FRL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ IDFPWPVP++PM FYV GQE
Sbjct: 740 FRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQE 799
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
EI+ SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL
Sbjct: 800 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQ 859
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GN
Sbjct: 860 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 919
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
PKVLSKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 920 PKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 969
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 1166 bits (3016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/890 (62%), Positives = 678/890 (76%), Gaps = 67/890 (7%)
Query: 80 LQFEE-----EEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSG 132
L FEE +DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSG
Sbjct: 137 LSFEEPLGAGAGEDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSG 196
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AKA++VVVLLCR PC
Sbjct: 197 SHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPC 256
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
+ N+LKDMNWD QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N
Sbjct: 257 LSVNALKDMNWDLSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNP 316
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
+A+ +DLEKPGVD++P Q V +++
Sbjct: 317 DASLEDLEKPGVDDEPQQ-------------------------------------VALKY 339
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQN+F PL+KLEADYDK +KESQ+++++TVRWD+GLN
Sbjct: 340 E------------------DAYQYQNVFAPLIKLEADYDKMMKESQSKDSLTVRWDIGLN 381
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKIPDNFGDEVGLELKS 431
KK IAYF K D ++RL+ GDEL+LRYS D+S W +GHVIK+ +EV LEL++
Sbjct: 382 KKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGHVIKLTAQ--EEVALELRA 439
Query: 432 SAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC 491
S G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R
Sbjct: 440 SQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRN 499
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
LP+ F AP LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ V
Sbjct: 500 TLPRRFGAPGLPELNASQVLAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQV 559
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELK 609
LVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SEL
Sbjct: 560 LVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELH 619
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
KL QLK+E GELSS+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LI
Sbjct: 620 KLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLANFRFRQVLI 679
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
DES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++P
Sbjct: 680 DESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKP 739
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
FRL+VQYRMHP LS FPSN FYEG+LQNGV +ER+ IDFPWPVP++PM FYV GQE
Sbjct: 740 FRLQVQYRMHPCLSDFPSNCFYEGTLQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQE 799
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
EI+ SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL
Sbjct: 800 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQ 859
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GN
Sbjct: 860 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 919
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
PKVLSKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 920 PKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 969
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 1165 bits (3015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/953 (59%), Positives = 697/953 (73%), Gaps = 82/953 (8%)
Query: 4 DAYGPSSQTLTFLDT--EETDLIGGDTQGSEFDFTD-FTLPSQSQTQASQLDSVNQIQVN 60
+ YG S +L F++T E++ L+ G TQ S+++F FTLPS S +V
Sbjct: 7 EEYGAGSLSLNFVETGDEDSSLLHGATQDSQYEFDQHFTLPSGGW-------SGTLPEVP 59
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICK 120
G+ + EL F EEED + LPPHAC+YCGIHDP+ V MC C+
Sbjct: 60 GEPST------------QELTFLEEEDTQP---TQSLPPHACRYCGIHDPSAVAMCLTCE 104
Query: 121 KWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKA 180
KWFCNGRG+T+GSHI+NHLVR++HKEV LHKDG LGET LECY C RNIF+LGFIPAKA
Sbjct: 105 KWFCNGRGNTAGSHIVNHLVRSQHKEVGLHKDGILGETQLECYQCASRNIFMLGFIPAKA 164
Query: 181 DSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQ 240
D+VVV+LCRTPCA Q +LKD NW ++WKPLI+DR LSWLVK+P+EQEQ R RQ+++AQ
Sbjct: 165 DTVVVVLCRTPCANQATLKDANWQVDEWKPLISDRQLLSWLVKIPSEQEQLRARQISAAQ 224
Query: 241 IAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLK 300
I +LE++WK+N A +DLEKPGVDE+P
Sbjct: 225 INRLEDLWKENPNAVLEDLEKPGVDEEP-------------------------------- 252
Query: 301 ESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQ 360
E V +R++ D Y Y+ IF PLV EA+YDKR KESQTQ
Sbjct: 253 -----ERVQLRYE------------------DAYHYRRIFAPLVSAEAEYDKREKESQTQ 289
Query: 361 ENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPD 419
VRWD+GLNKK AYF L K ++G M+LM GDEL+L++ WS +G VIKIPD
Sbjct: 290 SVGHVRWDIGLNKKPQAYFMLPKFSEGSMKLMLGDELRLKHQQTVDGEWSCVGSVIKIPD 349
Query: 420 NFGDEVGLELKSSA-GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHR 478
N DE+G+E++S A PT+ T F+ +F+W STSFDRM ALR D+ VS +IYH+
Sbjct: 350 NHNDEIGIEMRSKAENMPTDTRTNFTCEFVWNSTSFDRMHAALRLLGQDESCVSQFIYHK 409
Query: 479 LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSAT 538
LLGH VD+++F+ LPK FSAP LP+LN SQV AVK +QRPLSLIQGPPGTGKTVTSAT
Sbjct: 410 LLGHEVDDIVFKVQLPKRFSAPGLPELNHSQVQAVKMVLQRPLSLIQGPPGTGKTVTSAT 469
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
IVY LV+QT VLVCAPSNIAVDQL EKIHRTGLKVVR+CAKSRE +DSPV+FLALHNQ
Sbjct: 470 IVYHLVRQTSGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVAFLALHNQ 529
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
++ ++ +EL KL QLKEE GEL+ ADE+R+R L+ EK LL ADVICCTCV A D R
Sbjct: 530 LKAVQGAAELHKLQQLKEEIGELADADERRFRTLRMAKEKQLLGAADVICCTCVSAADNR 589
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
L ++ +LIDES QATEPE MV V+ G KQL+LVGDHCQLGPV+MCKKAA+AGLSQSL
Sbjct: 590 LSHMRIKCVLIDESTQATEPEVMVAVVRGVKQLVLVGDHCQLGPVIMCKKAAKAGLSQSL 649
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
FERLVVLG RP RL+VQYRMHP LS FPSN FYEG+LQNGV ER+L+ +D+ WPVPDK
Sbjct: 650 FERLVVLGTRPIRLQVQYRMHPALSAFPSNVFYEGTLQNGVTQGERQLAGVDWQWPVPDK 709
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLV 838
PM+F+ GQEE++ SGTSY+NRTEA+NVEK+ TRF++ G++PEQIG+ITPYEGQR+++V
Sbjct: 710 PMMFWSCYGQEELSPSGTSYLNRTEAANVEKVATRFLKAGLRPEQIGIITPYEGQRSYIV 769
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
Q MQ QG+L +K+Y E+EVA+VDAFQGREKD+II++CVRSN+HQGIGFLND RRLNVALT
Sbjct: 770 QFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNEHQGIGFLNDSRRLNVALT 829
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RAKYG+I+IGN K+LS+ PLWN LL +KE+ LVEGPLNNLK S I SKP+
Sbjct: 830 RAKYGVIIIGNAKILSRHPLWNQLLTMFKEKNCLVEGPLNNLKPSPITLSKPR 882
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1270
Score = 1165 bits (3014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/896 (61%), Positives = 686/896 (76%), Gaps = 63/896 (7%)
Query: 70 LNLVSQKLHELQFEEEEDDGN-EFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNG 126
++ ++ + L FE+ DD N E+ + HAC+YCG+ +PA V+ CN+ C+KWFCN
Sbjct: 104 VDALAAGMSGLNFEDTGDDDNYEYGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNS 163
Query: 127 RGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVL 186
RG+TSGSHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AK +SVVVL
Sbjct: 164 RGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVL 223
Query: 187 LCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEE 246
LCR PC + N+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R RQ+++ QI K+EE
Sbjct: 224 LCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEE 283
Query: 247 VWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
+WK N +A+F+DLEKPGVD++P +
Sbjct: 284 LWKTNPDASFEDLEKPGVDDEP-------------------------------------Q 306
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 366
+V ++++ D YQYQN+F PL+KLEADYDK +KESQ+++NVT+R
Sbjct: 307 SVALKYE------------------DAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIR 348
Query: 367 WDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKIPDNFGDEV 425
WD+GLNKK +AYF K D ++RL+ GDEL+LRYS DA+ W +GHVIK+ +EV
Sbjct: 349 WDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQ--EEV 406
Query: 426 GLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 485
LEL+++ G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+
Sbjct: 407 ALELRANQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVE 466
Query: 486 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK 545
+ R LP+ F AP LP+LN SQV+AVK +QRP+SLIQGPPGTGKTVTSA +VY + K
Sbjct: 467 VQMVRNALPRRFGAPGLPELNASQVFAVKSVLQRPISLIQGPPGTGKTVTSAALVYHMAK 526
Query: 546 QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN 605
Q VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ +
Sbjct: 527 QGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTS 586
Query: 606 --SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGAGDPRL +
Sbjct: 587 DKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFR 646
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F +LIDES QATEPEC++P++LGAKQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV
Sbjct: 647 FRQVLIDESTQATEPECLIPLVLGAKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 706
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY 783
+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ S IDFPWPVP++PM FY
Sbjct: 707 LLGVKPIRLQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFY 766
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQY 843
V GQEEI+ SGTSY+NRTEA+NVEKI T F++ G+ P QIGVITPYEGQRA++V +M
Sbjct: 767 VQMGQEEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSR 826
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
G+L ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YG
Sbjct: 827 NGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 886
Query: 904 IIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
I+++GNPKVLSKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ + + +
Sbjct: 887 IVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRL 942
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 1162 bits (3007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/916 (63%), Positives = 674/916 (73%), Gaps = 131/916 (14%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC
Sbjct: 33 TSQLLAELNFEEDEED--TYYTKDLPIHAC------------------------------ 60
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 61 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 120
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWK--- 249
A+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK
Sbjct: 121 ASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKMHQ 180
Query: 250 ---------------DNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEAD 294
+N AT +DLEKPGVDE+P
Sbjct: 181 NPSMPPTVAHSQKRHENPSATLEDLEKPGVDEEP-------------------------- 214
Query: 295 YDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRL 354
++V +R++ D YQYQNIFGPLVKLEADYDK+L
Sbjct: 215 -----------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKL 245
Query: 355 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDM------------RLMQGDELKLRYSY 402
KESQTQ+N+TVRWD+GLNKK IAYF+L KTD + +L+ ++ L +
Sbjct: 246 KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGVERVMSHTHPVPDKLILNTKVSLAFDK 305
Query: 403 DASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALR 462
DA+ T ++GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ AL+
Sbjct: 306 DANLTQH---------TDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALK 356
Query: 463 KFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLS 522
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+ +R + RPLS
Sbjct: 357 TFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTV----FFSRRRASPTS-TTPRPLS 411
Query: 523 LIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKS 582
LIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKS
Sbjct: 412 LIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKS 471
Query: 583 REAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLD 642
REAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL
Sbjct: 472 REAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLM 531
Query: 643 NADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGP 702
NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGP
Sbjct: 532 NADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGP 591
Query: 703 VVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD 762
VVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A
Sbjct: 592 VVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAA 651
Query: 763 ERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE 822
+R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+
Sbjct: 652 DRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPD 711
Query: 823 QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQ
Sbjct: 712 QIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ 771
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKE 942
GIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+E
Sbjct: 772 GIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRE 831
Query: 943 SLILFSKPKQYFKKNN 958
SL+ FSKP++ N
Sbjct: 832 SLMQFSKPRKLVNTIN 847
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 1162 bits (3006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/876 (62%), Positives = 669/876 (76%), Gaps = 58/876 (6%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
F+ DD + +LPPHAC YCGIH PA V+ C +C KWFCN RG+TS SHI+NHLVR
Sbjct: 74 FDAVLDDLKDESQVDLPPHACSYCGIHSPASVVKCIVCSKWFCNSRGNTSASHIVNHLVR 133
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
AKHKEV LH + PLGET+ ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA + KD+
Sbjct: 134 AKHKEVILHSESPLGETIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAIS--KDI 191
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
+W+ W PLI DRSFLSWLVK P+E EQ R RQ++ QI +LE++W++N+ AT +DLEK
Sbjct: 192 SWNAALWAPLIDDRSFLSWLVKPPSETEQLRSRQISFQQINRLEDLWRENSTATLEDLEK 251
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
PGVD++P +++ +R++
Sbjct: 252 PGVDDEP-------------------------------------QSILLRYE-------- 266
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D YQYQNIFGPLVK+EADYDKRLKESQTQ +++VRWD+GLN+K +A+F L
Sbjct: 267 ----------DAYQYQNIFGPLVKIEADYDKRLKESQTQTDISVRWDLGLNQKRVAWFCL 316
Query: 382 AKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
K + G++RL GDEL+L+YS K W G GHVIKIP+N DE+GLEL+ S G PTE T
Sbjct: 317 PKLESGEVRLAVGDELRLKYSGQLHKPWEGDGHVIKIPNNVSDEIGLELRRSEGVPTEVT 376
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
++ DF+WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH ++ + R H+PK FSAP
Sbjct: 377 HNYTADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGHELEPQVLRTHMPKRFSAP 436
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+YAVK +Q+P+SLIQGPPGTGKTVTSA+ VY L K VLVCAPSN+A
Sbjct: 437 GLPELNHSQMYAVKSVLQKPISLIQGPPGTGKTVTSASTVYHLAKMNPGQVLVCAPSNVA 496
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQLTEKIH TGLKVVR+ AKSREA+DS VSFL LH Q+ N + EL+KL+QLK E GE
Sbjct: 497 VDQLTEKIHATGLKVVRLTAKSREALDSSVSFLTLHQQVANYTTHVELQKLIQLKNEQGE 556
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DE++Y+ L + EK +L ADVICCTCVGAGDPRL K+KF ++LIDE+ QA EPEC
Sbjct: 557 LSSNDERKYKALIRQCEKEILSAADVICCTCVGAGDPRLSKLKFRTVLIDEATQAAEPEC 616
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAARAGL+QSLFERLVVLG RP RL+VQYRMHP
Sbjct: 617 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 676
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEG+LQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++N
Sbjct: 677 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 736
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEASNVEKI T+F + G+ P QIGV+TPYEGQR+++V +MQ+ GSL +Y+EIEVASV
Sbjct: 737 RTEASNVEKIVTKFFKSGVVPSQIGVVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASV 796
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW+
Sbjct: 797 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWH 856
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LL YKE+ LVEGPL+NL+ S+I FSKP++ K
Sbjct: 857 YLLTHYKEKNCLVEGPLSNLQPSMIQFSKPRRTLVK 892
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 1161 bits (3003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/865 (63%), Positives = 668/865 (77%), Gaps = 62/865 (7%)
Query: 100 HACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGE 157
HAC+YCGIH+PA V CN+ C+KWFCN RG+TSGSHI+NHLVRAKHKEV LHKD PLGE
Sbjct: 6 HACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGE 65
Query: 158 TVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSF 217
T+LECY CG RN+F+LGFI AKA++VVVLLCR PC + N+LKDMNWD QW PLI DR F
Sbjct: 66 TILECYNCGCRNVFLLGFISAKAENVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCF 125
Query: 218 LSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYED 277
LSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N +A+ +DLEKPGVD++P Q
Sbjct: 126 LSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQQ------- 178
Query: 278 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQ 337
V ++++ D YQYQ
Sbjct: 179 ------------------------------VALKYE------------------DAYQYQ 190
Query: 338 NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELK 397
N+F PL+KLEADYDK +KESQ+++++TVRWD+GLNKK IAYF K D ++RL+ GDEL+
Sbjct: 191 NVFAPLIKLEADYDKMMKESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELR 250
Query: 398 LRYSYDASK-TWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDR 456
LRYS D+S W +GHVIK+ +EV LEL++S G P + GFSVDF+WKSTSFDR
Sbjct: 251 LRYSGDSSHPAWQSVGHVIKLTAQ--EEVALELRASQGVPVDLNHGFSVDFVWKSTSFDR 308
Query: 457 MQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA 516
MQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+LN SQV AVK
Sbjct: 309 MQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSV 368
Query: 517 IQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV 576
+Q+P+SLIQGPPGTGKTVTSA IVY + KQ VLVCAPSN+AVDQL EKI TGLKVV
Sbjct: 369 LQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISSTGLKVV 428
Query: 577 RVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETGELSSADEKRYRMLKK 634
R+CAKSREA+ SPV L LH Q+R+++ + SEL KL QLK+E GELSS+DEK+Y+ LK+
Sbjct: 429 RLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKR 488
Query: 635 NAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILV 694
E+ +L +ADVICCTCVGAGDPRL +F +LIDES QATEPEC++P++LG KQ++LV
Sbjct: 489 ATEREILQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLV 548
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
GDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++PFRL+VQYRMHP LS FPSN FYEG+
Sbjct: 549 GDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCLSDFPSNCFYEGT 608
Query: 755 LQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF 814
LQNGV +ER+ IDFPWPVP++PM FYV GQEEI+ SGTSY+NRTEA+NVEKI T F
Sbjct: 609 LQNGVTVNERQTPGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTF 668
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
+R G+ P QIGVITPYEGQRA++V +M GSL ++Y+EIEVASVD+FQGREKD II+S
Sbjct: 669 LRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILS 728
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
CVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GNPKVLSKQPLWN+LL YKE + LVE
Sbjct: 729 CVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVE 788
Query: 935 GPLNNLKESLILFSKPKQYFKKNNM 959
GPLNNLK+S++ F KPK+ + +
Sbjct: 789 GPLNNLKQSMVQFQKPKKIYNDRRL 813
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 1158 bits (2996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/881 (62%), Positives = 669/881 (75%), Gaps = 63/881 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
F+ DD + +LPPHAC YCGIH PA V+ C IC KWFCN RG+TS SHI+NHLVR
Sbjct: 79 FDAVLDDLKDEGQVDLPPHACSYCGIHSPASVVKCLICSKWFCNSRGNTSASHIVNHLVR 138
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
AKHKEV LH + PLGET+ ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA + KD+
Sbjct: 139 AKHKEVILHSESPLGETIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAVS--KDI 196
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
+W+ W PLI DRSFLSWLVK P+EQEQ R RQ++ QI +LE++W++NA AT DLEK
Sbjct: 197 SWNPTLWAPLIDDRSFLSWLVKPPSEQEQLRSRQISFQQINRLEDLWRENANATLDDLEK 256
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
PGVD++P + V +R++
Sbjct: 257 PGVDDEP-------------------------------------QPVILRYE-------- 271
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D YQYQNIFGPLVK+EADYDKRLKESQTQ ++TVRWD+GLN+K +A+F L
Sbjct: 272 ----------DAYQYQNIFGPLVKIEADYDKRLKESQTQTDITVRWDLGLNQKRVAWFGL 321
Query: 382 AKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
K + G++RL GDEL+L+Y+ K W G GHVIKIP+N DE+GLEL+ S G PTE T
Sbjct: 322 PKLESGEVRLAVGDELRLKYNGTLHKPWEGDGHVIKIPNNVSDEIGLELRRSEGVPTEVT 381
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
G++ DF+WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH ++ + R +PK FSAP
Sbjct: 382 HGYTADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGHELEPQVLRTQMPKRFSAP 441
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ++AVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+A
Sbjct: 442 GLPELNHSQMFAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVA 501
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQLTEKIH TGLKVVR+ AKSREA+DS VSFL LH Q+ N + EL+KL+QLK E GE
Sbjct: 502 VDQLTEKIHATGLKVVRLSAKSREALDSSVSFLTLHQQVANNTTHVELQKLIQLKNEQGE 561
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DE++Y+ L + EK +L ADVICCTCVGAGDPRL K+KF ++LIDE+ QA EPEC
Sbjct: 562 LSSNDERKYKALIRQCEKEILGVADVICCTCVGAGDPRLSKLKFRTVLIDEATQAAEPEC 621
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P+ILG KQ++LVGDH QLGPV+M KKAARAGL+QSLFERLVVLG RP RL+VQYRMHP
Sbjct: 622 MIPLILGCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 681
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEG+LQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++N
Sbjct: 682 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 741
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEASNVEKI T+F + G+ P QIGVITPYEGQR+++V +MQ+ GSL +Y+EIEVASV
Sbjct: 742 RTEASNVEKIVTKFFKSGVVPSQIGVITPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASV 801
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK----- 915
DAFQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK
Sbjct: 802 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKLTRLQ 861
Query: 916 QPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
PLW+ LL YKE+ LVEGPL+NL+ S+I FSKP++ K
Sbjct: 862 HPLWHYLLTHYKEKNCLVEGPLSNLQPSMIQFSKPRRTLVK 902
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/959 (58%), Positives = 696/959 (72%), Gaps = 82/959 (8%)
Query: 27 DTQGSEFDFTDFTLPSQSQTQASQLDSVNQI---------------------QVNGKQNL 65
+TQG +FD+ DF P + + DS++ G +
Sbjct: 28 NTQGEDFDYPDFRDPIRPSAWPTPSDSISDAADHQSDASPVSAAPGSATKARGAAGSSSS 87
Query: 66 DNSNLNLVSQKLHELQFEEEEDDGN-EFFNKELPPHACKYCGIHDPAYVIMCNI--CKKW 122
+ ++ ++ + L FEE DD N E+ + HAC+YCG+ +PA V+ CN+ C+KW
Sbjct: 88 SQAAVDALAAGMSGLNFEETGDDDNYEYGKGDFTEHACRYCGVQNPACVVRCNVPSCRKW 147
Query: 123 FCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADS 182
FCN RG+TSGSHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AK +S
Sbjct: 148 FCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTES 207
Query: 183 VVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIA 242
VVVLLCR PC + N+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R RQ+++ QI
Sbjct: 208 VVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQIN 267
Query: 243 KLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES 302
K+EE+WK N +A+ +DLEKPGVD++P + L+YED YQYQN+F PL+KLEADYDK +KES
Sbjct: 268 KVEELWKTNPDASLEDLEKPGVDDEPQPIALKYEDAYQYQNVFAPLIKLEADYDKMMKES 327
Query: 303 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 362
Q+++NVT+RWD+GLNKK IAYF K D + ++L + RL+ S
Sbjct: 328 QSKDNVTIRWDIGLNKKRIAYFVFPKEDNE-----------LRLVPGDELRLRYS----- 371
Query: 363 VTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFG 422
GD A W +GHVIK+
Sbjct: 372 -----------------------GDA---------------AHPAWQSVGHVIKLTAQ-- 391
Query: 423 DEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 482
+EV LEL++S G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH
Sbjct: 392 EEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 451
Query: 483 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQ 542
V+ + R LP+ F AP LP+LN SQV+AVK +Q+P+SLIQGPPGTGKTVTSA IVY
Sbjct: 452 EVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYH 511
Query: 543 LVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNM 602
+ KQ VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R++
Sbjct: 512 MAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHL 571
Query: 603 EMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
+ + SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGAGDPRL
Sbjct: 572 DTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLA 631
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
+F +LIDES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFE
Sbjct: 632 NFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFE 691
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
RLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ S IDFPWPVP++PM
Sbjct: 692 RLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSSGIDFPWPVPNRPM 751
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
FYV GQEEI+ SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +
Sbjct: 752 FFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNY 811
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
M G+L ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA
Sbjct: 812 MSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRA 871
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
+YGI+++GNPKVLSKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 872 RYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 930
>gi|301618945|ref|XP_002938872.1| PREDICTED: regulator of nonsense transcripts 1 [Xenopus (Silurana)
tropicalis]
Length = 971
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/857 (66%), Positives = 656/857 (76%), Gaps = 63/857 (7%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSV+AYGPSSQTLTFLDTEE +L+G DTQGSEF+FTDFTLPSQ+QTQ + ++ QVN
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTQGQSQNQLDG-QVN 59
Query: 61 GKQNL-----DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIM 115
G + + + SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+
Sbjct: 60 GPDGMLQNGTVDDGVGKTSQLLGELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVY 117
Query: 116 CNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGF 175
CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGF
Sbjct: 118 CNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGF 177
Query: 176 IPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQ 235
IPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ
Sbjct: 178 IPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQ 237
Query: 236 VTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADY 295
+T+ QI KLEE+WK+N AT +DLEKPGVDE+P
Sbjct: 238 ITAQQINKLEELWKENPSATLEDLEKPGVDEEP--------------------------- 270
Query: 296 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLK 355
++V +R++ D YQYQNIFGPLVKLEADYDK+LK
Sbjct: 271 ----------QHVLLRYE------------------DAYQYQNIFGPLVKLEADYDKKLK 302
Query: 356 ESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVI 415
ESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVI
Sbjct: 303 ESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVI 362
Query: 416 KIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYI 475
K+PDN+GDE+ +EL+SS GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YI
Sbjct: 363 KVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYI 422
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVT 535
YH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVT
Sbjct: 423 YHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVT 482
Query: 536 SATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLAL 595
SATIVY L +Q PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLAL
Sbjct: 483 SATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLAL 542
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG 655
HNQIRNME EL+KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAG
Sbjct: 543 HNQIRNMESMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAG 602
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
DPRL K++F SILIDES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLS
Sbjct: 603 DPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS 662
Query: 716 QSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
QSLFERLVVLGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP
Sbjct: 663 QSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQ 722
Query: 776 PDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRA 835
PDKPM FYVTQGQEEIA SGTSY+NRT VE + + I +Q+G + + +
Sbjct: 723 PDKPMFFYVTQGQEEIASSGTSYLNRTIDMEVECLLAKVIADFDPADQVGSLLAHGARFM 782
Query: 836 FLVQHMQYQGSLPAKIY 852
+ + +P +Y
Sbjct: 783 TTAMYDAREAIIPGSVY 799
>gi|256082379|ref|XP_002577434.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662752|emb|CAZ33672.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1325
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/954 (58%), Positives = 710/954 (74%), Gaps = 69/954 (7%)
Query: 2 SVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNG 61
S DAYGP+SQ LTF D EE DLIGGDTQG ++D +DFTLPSQSQTQASQLD
Sbjct: 6 SFDAYGPNSQALTFFDPEENDLIGGDTQGPDYDCSDFTLPSQSQTQASQLDP--DKNCFS 63
Query: 62 KQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKK 121
+Q+ + ++++S ++ +L F++E+ D + +LP HAC YCGIHDPA V+ CN KK
Sbjct: 64 QQHDGTNTIDVLSHRVADLDFKDEDQDDSSV---DLPEHACAYCGIHDPACVVFCNTTKK 120
Query: 122 WFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKAD 181
WFCNGRG+TSGSHIINHLVRA+ KEVTLHKDGPL +T+LECY CG +N+F+LGF+PAK++
Sbjct: 121 WFCNGRGNTSGSHIINHLVRARAKEVTLHKDGPLKDTLLECYVCGSKNVFLLGFVPAKSE 180
Query: 182 SVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQI 241
SVVVLLCR CA N+ KDM WD QW+P+I R FL+WLVKVP++++Q + RQ+++ QI
Sbjct: 181 SVVVLLCRNICA--NANKDMYWDPAQWQPIIQGRQFLAWLVKVPSDEQQAKARQISAQQI 238
Query: 242 AKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKE 301
+LEE+WK+N +A +DLEKPG D + + VLL R +
Sbjct: 239 NRLEEIWKENPQAAVEDLEKPGADNEVNPVLL------------------------RYEN 274
Query: 302 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQE 361
SQ QY+++F PLV+LEADYDK++KES E
Sbjct: 275 SQ-------------------------------QYRDVFIPLVELEADYDKKIKESLKLE 303
Query: 362 NVTVRWDVGLNKKSIAYFSL--AKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPD 419
NV+VRW+ LNK+ +AYF + A ++R+M GDEL +R + G GHVIK+PD
Sbjct: 304 NVSVRWETALNKRRVAYFRIPGANEGPELRIMHGDELIIRQFNSPNDYLVGDGHVIKVPD 363
Query: 420 NFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQS--VSAYIYH 477
NF DEVGLE+K P E T + ++F WKST FDRM+ A+ D+Q + YI++
Sbjct: 364 NFSDEVGLEMKQVIDTPLEPVT-YKIEFKWKSTPFDRMRRAI-SVVTDEQHGLLPPYIFY 421
Query: 478 RLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
RLLG +D+++ +C+LPK +SAP+LP+LN SQV+AVK +QRPLSLIQGPPGTGKTVTSA
Sbjct: 422 RLLGQELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQGPPGTGKTVTSA 481
Query: 538 TIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHN 597
+IVY L + VLV APSN AVDQL EKI RTGLKVVR+CA+SREA+ SPVS L LH
Sbjct: 482 SIVYHLNQIHQKKVLVVAPSNTAVDQLCEKIDRTGLKVVRLCARSREALASPVSRLMLHI 541
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
Q +N++ ++EL+KL QLK+ETGELS D+KRYR+LK+ E+ LL ADV+CCTCV AGD
Sbjct: 542 QAQNVKGHTELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMAADVVCCTCVTAGDA 601
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
RL ++ FHS+LIDES QATEPEC++P+++G +Q++LVGDHCQLGPV+ CKKAA AGL+QS
Sbjct: 602 RLERLSFHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCKKAASAGLTQS 661
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
LFER V+LGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A++R KIDFPWP PD
Sbjct: 662 LFERFVLLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDR-CKKIDFPWPNPD 720
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
+PM FY T GQEEI+G+G SY+NRTEA+ VEKI T+ ++ G+ P IGVITPYEGQRA+L
Sbjct: 721 RPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYL 780
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
++ Y GSL AK+YQEIE+ASVDAFQGREKD II+SCVR+N++QGIGFLNDPRRLNVAL
Sbjct: 781 AHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVAL 840
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
TRA+YG+IV+GNPK L KQPLWN LL+FY++Q +LVEGPLNNL E ++ F +PK
Sbjct: 841 TRARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLLVEGPLNNLGEYMLQFPRPK 894
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/961 (58%), Positives = 699/961 (72%), Gaps = 83/961 (8%)
Query: 4 DAYGPSSQTLTFLDTEETD--LIGGDTQGSEFDF-TDFTLPSQSQTQASQLDSVNQIQVN 60
D YG S +L F+DT + D L+ G TQ S+F+F FTLPSQ T +Q Q
Sbjct: 7 DEYGTPSLSLNFVDTPDGDSSLLHGATQDSQFEFDQQFTLPSQGWTGTLPEVGADQSQ-- 64
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICK 120
EL F +EE+ +LP HAC+YCGIHDPA V MC IC+
Sbjct: 65 ------------------ELVFVDEEEVP---VPGQLPAHACRYCGIHDPATVAMCIICQ 103
Query: 121 KWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKA 180
KWFCNGRG TS HI+ HLVR++HKEV+LHK+G LGETVLECY CG +NIF+LG+IPAKA
Sbjct: 104 KWFCNGRGSTSAGHIVIHLVRSQHKEVSLHKEGALGETVLECYQCGSKNIFMLGYIPAKA 163
Query: 181 DSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQ 240
D+VVV+LCR+PCA Q LKD +W ++WKPLI+DR LSWLVK+P+EQEQ R RQ+++ Q
Sbjct: 164 DTVVVVLCRSPCANQAVLKDHSWQVDEWKPLISDRQLLSWLVKIPSEQEQLRARQISAVQ 223
Query: 241 IAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLK 300
I +LEE+WK++ +A F+DLE+PG+DE+P
Sbjct: 224 INRLEELWKEDPKAVFEDLERPGMDEEP-------------------------------- 251
Query: 301 ESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQ 360
E V ++++ D YQY+ +F PLVK EADYD+R KESQTQ
Sbjct: 252 -----ERVQLKYE------------------DAYQYKRVFEPLVKAEADYDRREKESQTQ 288
Query: 361 ENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPD 419
VRWDVGLN+K A+F L K ++G M+LM GDEL+L++S A WS +G VIKIPD
Sbjct: 289 SVGHVRWDVGLNRKPQAFFQLPKFSEGSMKLMLGDELRLKHSQTAGGEWSSIGCVIKIPD 348
Query: 420 NFGDEVGLELKSSA-GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHR 478
N DEVG+E++ A PT+ T F+ +F+W STSFDRMQ AL D+ VS +IYH+
Sbjct: 349 NHNDEVGIEMRLKAENVPTDTRTNFTCEFVWNSTSFDRMQAALSLLGQDEDCVSQFIYHK 408
Query: 479 LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSAT 538
L+GH++D+++F+ LPK FS P LP+LN SQV+AVK +QRPLSLIQGPPGTGKTVTSAT
Sbjct: 409 LMGHDIDDIIFKVSLPKRFSVPGLPELNHSQVHAVKTVLQRPLSLIQGPPGTGKTVTSAT 468
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
IVY LVKQT VLVCAPSNIAVDQL EKIHRTGLKVVR+CAKSRE +DSPV+FLALHNQ
Sbjct: 469 IVYHLVKQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVAFLALHNQ 528
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
++ + +EL KL QLKEE GEL+ ADE+R+R L+ E LL ADVICCTCV A D R
Sbjct: 529 LKALHGAAELHKLQQLKEEIGELADADERRFRALRIAKECQLLAAADVICCTCVSAADSR 588
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
L ++ +LIDES QATEPE MV V+ G +QL+LVGDHCQLGPV+MCKKAA+AGLSQSL
Sbjct: 589 LSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQSL 648
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
FERLV+LG RP RL+VQYRMHP LS FPSN FYEGSLQNGV ER+L ID+ WPVPDK
Sbjct: 649 FERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGERQLIGIDWQWPVPDK 708
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLV 838
PM+F+ GQEE++ SGTS++NRTEA+NVEK+ TRF++ G+KPEQIG+ITPYEGQR+++V
Sbjct: 709 PMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQIGIITPYEGQRSYIV 768
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
Q MQ QG+L +K+Y E+EVA+VDAFQGREKD+II++CVRSNDHQGIGFLND RRLNVALT
Sbjct: 769 QFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALT 828
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
RAK+G+I++GN KVLS+ PLWN LL+ +KE+ LVEGPLNNLK S I SKP++ N
Sbjct: 829 RAKFGLIIVGNAKVLSRHPLWNYLLSVFKEKGCLVEGPLNNLKPSPITLSKPRRVPHVMN 888
Query: 959 M 959
M
Sbjct: 889 M 889
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/968 (58%), Positives = 696/968 (71%), Gaps = 91/968 (9%)
Query: 27 DTQGSEFDFTDF--------TLPSQSQTQASQLD----SVNQIQVNGKQNLDNSN----- 69
+TQG +FD+ +F P+ S + A D S +Q + S
Sbjct: 28 NTQGEDFDYPEFRDPIRPPVAWPTPSDSLADHTDRGGGSDHQSDASPVSAAPGSATKGRT 87
Query: 70 -------------LNLVSQKLHELQFEEEEDDGN-EFFNKELPPHACKYCGIHDPAYVIM 115
++ ++ + L FE+ DD N EF HAC+YCG+ +PA V+
Sbjct: 88 GGGSGNTGGNNQMVDALAAGMSGLTFEDTGDDDNYEFGKGNFTEHACRYCGVSNPACVVR 147
Query: 116 CNI--CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
CN+ C+KWFCN RG+TSGSHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+L
Sbjct: 148 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 207
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFI AK +SVVVLLCR PC + N+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R
Sbjct: 208 GFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRA 267
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI K+EE+WK N +A+ +DLEKPGVD++P V L+YED YQYQN+F PL+KLEA
Sbjct: 268 RQISAQQINKIEELWKTNPDASLEDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEA 327
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
DYDK +KESQ+++NVTVRWD+GLNKK IAYF K D + ++L + R
Sbjct: 328 DYDKMMKESQSKDNVTVRWDIGLNKKRIAYFVFPKEDNE-----------LRLVPGDELR 376
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
L+ S GD A W +GH
Sbjct: 377 LRYS----------------------------GDA---------------AHPAWHSVGH 393
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIK+ +EV LEL++S G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS
Sbjct: 394 VIKLTAQ--EEVALELRASQGVPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 451
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYH LLGH V+ + R LP+ F AP LP+LN SQV+AVK +Q+P+SLIQGPPGTGKT
Sbjct: 452 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKT 511
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSA IVY + KQ VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L
Sbjct: 512 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 571
Query: 594 ALHNQIRNMEMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
LH Q+R+++ + SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTC
Sbjct: 572 TLHYQVRHLDTSERSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 631
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
VGAGDPRL +F +LIDES QATEPEC++P++LGAKQ +LVGDHCQLGPV+MCKKAAR
Sbjct: 632 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAAR 691
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
AGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ + IDF
Sbjct: 692 AGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDF 751
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
PWPVP++PM FYV GQEEI+ SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYE
Sbjct: 752 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 811
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
GQRA++V +M G+L ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPR
Sbjct: 812 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 871
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RLNVALTRA+YGI+++GNPKVLSKQPLWN+LL YKE + LVEGPLNNLK+S+I F KPK
Sbjct: 872 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPK 931
Query: 952 QYFKKNNM 959
+ + +
Sbjct: 932 KIYNDRRL 939
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/968 (57%), Positives = 696/968 (71%), Gaps = 91/968 (9%)
Query: 27 DTQGSEFDFTDF--------TLPSQSQTQASQLD----SVNQIQVNGKQNLDNSN----- 69
+TQG +FD+ +F P+ S + A D S +Q + S
Sbjct: 28 NTQGEDFDYPEFRDPIRPPVAWPTPSDSLADHTDRGGGSDHQSDASPVSAAPGSATKGRT 87
Query: 70 -------------LNLVSQKLHELQFEEEEDDGN-EFFNKELPPHACKYCGIHDPAYVIM 115
++ ++ + L F++ DD N EF HAC+YCG+ +PA V+
Sbjct: 88 GGGSGNTGGNNQMVDALAAGMSGLTFKDTGDDDNYEFGKGNFTEHACRYCGVSNPACVVR 147
Query: 116 CNI--CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
CN+ C+KWFCN RG+TSGSHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+L
Sbjct: 148 CNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLL 207
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFI AK +SVVVLLCR PC + N+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R
Sbjct: 208 GFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRA 267
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI K+EE+WK N +A+ +DLEKPGVD++P V L+YED YQYQN+F PL+KLEA
Sbjct: 268 RQISAQQINKIEELWKTNPDASLEDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEA 327
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
DYDK +KESQ+++NVTVRWD+GLNKK IAYF K D + ++L + R
Sbjct: 328 DYDKMMKESQSKDNVTVRWDIGLNKKRIAYFVFPKEDNE-----------LRLVPGDELR 376
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
L+ S GD A W +GH
Sbjct: 377 LRYS----------------------------GDA---------------AHPAWHSVGH 393
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIK+ +EV LEL++S G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS
Sbjct: 394 VIKLTAQ--EEVALELRASQGVPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSG 451
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYH LLGH V+ + R LP+ F AP LP+LN SQV+AVK +Q+P+SLIQGPPGTGKT
Sbjct: 452 YIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKT 511
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSA IVY + KQ VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L
Sbjct: 512 VTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHL 571
Query: 594 ALHNQIRNMEMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
LH Q+R+++ + SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTC
Sbjct: 572 TLHYQVRHLDTSERSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTC 631
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
VGAGDPRL +F +LIDES QATEPEC++P++LGAKQ +LVGDHCQLGPV+MCKKAAR
Sbjct: 632 VGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDHCQLGPVIMCKKAAR 691
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
AGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ + IDF
Sbjct: 692 AGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDF 751
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
PWPVP++PM FYV GQEEI+ SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYE
Sbjct: 752 PWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYE 811
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
GQRA++V +M G+L ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPR
Sbjct: 812 GQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPR 871
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RLNVALTRA+YGI+++GNPKVLSKQPLWN+LL YKE + LVEGPLNNLK+S+I F KPK
Sbjct: 872 RLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPK 931
Query: 952 QYFKKNNM 959
+ + +
Sbjct: 932 KIYNDRRL 939
>gi|388580348|gb|EIM20663.1| hypothetical protein WALSEDRAFT_54922 [Wallemia sebi CBS 633.66]
Length = 941
Score = 1148 bits (2969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/864 (61%), Positives = 661/864 (76%), Gaps = 56/864 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
+LP HAC YCGIH+PA V+ C IC+KWFCN RG TSGSHI+NHLVR+KHK+V LH++ PL
Sbjct: 20 DLPEHACNYCGIHNPACVVKCQICQKWFCNARGSTSGSHIVNHLVRSKHKQVILHQESPL 79
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
GET ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA +D+ WD QW PLI DR
Sbjct: 80 GETQPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAMTGTRDIVWDTSQWAPLIEDR 139
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRY 275
SFL+WLVKVP+E EQ R RQ++ QI +LEE+WKD+ AT +DL++PGVDE+P +LLRY
Sbjct: 140 SFLTWLVKVPSETEQLRARQISYNQINRLEELWKDDRAATLEDLDRPGVDEEPQPILLRY 199
Query: 276 EDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQ 335
ED YQYQNIFGPLVK+EAD+DKRLKESQ+Q ++ VRWD+GLN+K +A+FS+ K
Sbjct: 200 EDAYQYQNIFGPLVKIEADFDKRLKESQSQPDLIVRWDIGLNQKRVAWFSMPKL------ 253
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDE 395
E+ V+ VG DE
Sbjct: 254 -------------------------ESGEVKLAVG-----------------------DE 265
Query: 396 LKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFD 455
L+L SY + WSG+GHV+KIP+N DE+ LEL+ G P + T GF +F+WKSTSFD
Sbjct: 266 LRL--SYRGDRDWSGIGHVVKIPNNVSDEIALELRRQDGVPIDMTHGFEAEFVWKSTSFD 323
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
RMQLA++ FAVD+QSVS YIYH+LLGH+++ + R +PK FSAPNLP+LN SQ+YAVK
Sbjct: 324 RMQLAMKTFAVDEQSVSGYIYHKLLGHDLEPQVVRTQMPKKFSAPNLPELNHSQMYAVKS 383
Query: 516 AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKV 575
+Q+PLSLIQGPPGTGKTVTSA++VY L K VLVCAPSN+AVDQL EKIH TGLK
Sbjct: 384 VLQKPLSLIQGPPGTGKTVTSASVVYHLSKMNPGQVLVCAPSNVAVDQLCEKIHLTGLKT 443
Query: 576 VRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKN 635
VR+ AKSREA+DSP+SFL LH Q+ N + EL+KL LK E GELSS+DE++++ L +
Sbjct: 444 VRLTAKSREAVDSPISFLTLHEQVANSTHHIELQKLFMLKNEQGELSSSDERKFKTLTRV 503
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
EK +L+ ADVICCTCVGAGDPRL K+KF ++LIDE+ QA EPEC +P+I+G KQ +LVG
Sbjct: 504 CEKEILNAADVICCTCVGAGDPRLSKLKFRTVLIDEATQAAEPECTIPLIMGCKQAVLVG 563
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSL 755
DH QLGPV+M KKAARAGL+QSLFERLV+LG RP RL+VQYRMHP LS+FPSN FYEG+L
Sbjct: 564 DHQQLGPVIMNKKAARAGLTQSLFERLVMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTL 623
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI 815
QNGV A ER +DFPWP+PD PM FY GQEEI+ SGTS++NRTEASN EKI T+F
Sbjct: 624 QNGVTAPERLRKNVDFPWPIPDTPMFFYQNLGQEEISSSGTSFLNRTEASNCEKIVTKFF 683
Query: 816 RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
+ G+ P QIG++TPYEGQR+++V +MQ+ G+L ++Y ++EVASVDAFQGREKD II+SC
Sbjct: 684 KAGVVPAQIGIVTPYEGQRSYIVNYMQFNGALKKELYNQVEVASVDAFQGREKDYIILSC 743
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VRSN+HQGIGFL+DPRRLNVA+TRAKYG +++GNPK+LSK PLW++LL +KE+K LVEG
Sbjct: 744 VRSNEHQGIGFLSDPRRLNVAMTRAKYGAVILGNPKILSKHPLWHHLLTHFKEKKTLVEG 803
Query: 936 PLNNLKESLILFSKPKQYFKKNNM 959
PLNNL+ES+I F+KP+Q K +
Sbjct: 804 PLNNLQESMIRFNKPRQPLNKATL 827
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/955 (58%), Positives = 698/955 (73%), Gaps = 89/955 (9%)
Query: 4 DAYGPSSQTLTFLDTEETD--LIGGDTQGSEFDF-TDFTLPSQSQTQASQLDSVNQIQVN 60
D YG S +L F+DT + D L+ G TQ S+F+F FTLPSQ T +Q Q
Sbjct: 7 DEYGTPSLSLNFVDTPDGDSSLLHGATQDSQFEFDQQFTLPSQGWTGTLPEVGADQSQ-- 64
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEF-FNKELPPHACKYCGIHDPAYVIMCNIC 119
EL F +EE EF +LP HAC+YCGIHDPA V MC +C
Sbjct: 65 ------------------ELVFVDEE----EFSVPGQLPTHACRYCGIHDPATVAMCMVC 102
Query: 120 KKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAK 179
+KWFCNGRG TS HI+ HLVR++HKEV+LHK+G LGETVLECY CG +NIF+LG+IPAK
Sbjct: 103 EKWFCNGRGSTSAGHIVIHLVRSQHKEVSLHKEGALGETVLECYQCGSKNIFMLGYIPAK 162
Query: 180 ADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSA 239
AD+VVV+LCR+PCA Q LKD +W ++WKPLI+DR LSWLVK+P+EQEQ R RQ+++
Sbjct: 163 ADTVVVVLCRSPCANQAVLKDHSWQVDEWKPLISDRQLLSWLVKIPSEQEQLRARQISAV 222
Query: 240 QIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRL 299
QI +LEE+WK++ +A F+DLE+PG+DE+P
Sbjct: 223 QINRLEELWKEDPKAVFEDLERPGMDEEP------------------------------- 251
Query: 300 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQT 359
E+V ++++ D YQY+ +F PLVK EADYD+R KESQT
Sbjct: 252 ------EHVQLKYE------------------DAYQYKRVFEPLVKAEADYDRREKESQT 287
Query: 360 QENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIP 418
Q VRWD+GLN+K A+F L K ++G M+LM GDEL+L++S A WS +G VIKIP
Sbjct: 288 QSVGHVRWDIGLNRKPQAFFQLPKFSEGSMKLMLGDELRLKHSQTAGGEWSSVGCVIKIP 347
Query: 419 DNFGDEVGLELKSSA-GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
DN DEVG+E++ A PT+ T F+ +F+W STSF+RMQ AL D+ VS +IYH
Sbjct: 348 DNHNDEVGIEMRLKAENVPTDTRTNFTCEFVWNSTSFERMQAALSLLGQDEDCVSQFIYH 407
Query: 478 RLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
+L+GH++D+++F+ LPK FS P LP+LN SQV+AVK +QRPLSLIQGPPGTGKTVTSA
Sbjct: 408 KLMGHDIDDIIFKVSLPKRFSVPGLPELNHSQVHAVKTVLQRPLSLIQGPPGTGKTVTSA 467
Query: 538 TIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHN 597
TIVY LVKQT VLVCAPSNIAVDQL EKIHRTGLKVVR+CAKSRE +DSPV+FLALHN
Sbjct: 468 TIVYHLVKQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVAFLALHN 527
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
Q+R + +EL KL QLKEE GEL+ ADE+R+R L+ E LL ADVICCTCV A D
Sbjct: 528 QLRALHGAAELHKLQQLKEEMGELADADERRFRALRIAKECQLLAAADVICCTCVSAADS 587
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
RL ++ +LIDES QATEPE MV V+ G +QL+LVGDHCQLGPV+MCKKAA+AGLSQS
Sbjct: 588 RLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQS 647
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
LFERLV+LG RP RL+VQYRMHP LS FPSN FYEGSLQNG ER+L ID+ WPVPD
Sbjct: 648 LFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNG----ERQLIGIDWQWPVPD 703
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
KPM+F+ GQEE++ SGTS++NRTEA+NVEK+ TRF++ G+KPEQIG+ITPYEGQR+++
Sbjct: 704 KPMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLKAGIKPEQIGIITPYEGQRSYI 763
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
VQ MQ QG+L +K+Y E+EVA+VDAFQGREKD+II++CVRSNDHQGIGFLND RRLNVAL
Sbjct: 764 VQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVAL 823
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
TRAK+G+I++GN KVLS+ PLWN LL+ +KE+ LVEGPLNNLK S I SKP++
Sbjct: 824 TRAKFGLIIVGNAKVLSRHPLWNYLLSMFKEKGCLVEGPLNNLKPSPITLSKPRR 878
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/867 (62%), Positives = 657/867 (75%), Gaps = 57/867 (6%)
Query: 93 FNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKD 152
+++LPPHAC YCGIH+ A VI C C +WFCN RG TSGSHI+NHLVRAKHKEV LH+D
Sbjct: 100 LSRDLPPHACSYCGIHNAACVIECLTCHRWFCNSRGSTSGSHIVNHLVRAKHKEVKLHQD 159
Query: 153 GPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLI 212
GPLG+TV ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA + KD+ WD QW PLI
Sbjct: 160 GPLGDTVPECYNCGAKNVFILGFIPAKSDTVVVLLCRQPCAAVQTSKDIIWDTAQWSPLI 219
Query: 213 ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVL 272
DRSFLSWLVKVPTEQEQ R RQ+T QI KLEE+WKDNA AT +DLEKPG+D++P +
Sbjct: 220 EDRSFLSWLVKVPTEQEQLRARQITFQQINKLEELWKDNAAATVEDLEKPGIDDEPQPI- 278
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
L+K E D
Sbjct: 279 ---------------LLKYE---------------------------------------D 284
Query: 333 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLM 391
YQYQNIFGPLVK+EADYDK+LKE+QTQ+++ VRWD+GLN+K +A+F L K + G++RL
Sbjct: 285 AYQYQNIFGPLVKIEADYDKKLKEAQTQDDLIVRWDMGLNQKRVAWFRLPKLESGEVRLA 344
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
GDELKLRY K W GLGHVIK+P+N DEV LEL+ + G P + T FS DFIWKS
Sbjct: 345 VGDELKLRYDGTLHKHWDGLGHVIKVPNNISDEVALELRKNDGVPHDCTHNFSADFIWKS 404
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCHLPKHFSAPNLPDLNRSQV 510
TSFDRMQLA++ FAVD+QSVS YIYH+L+GH + R +PK SAPNLPDLN SQV
Sbjct: 405 TSFDRMQLAMKTFAVDEQSVSGYIYHKLMGHEAAVPTVLRTPMPKRVSAPNLPDLNHSQV 464
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
YAVK +Q+PLSLIQGPPGTGKTVTSA+IVY L + VLV APSN+AVDQLTEKIH
Sbjct: 465 YAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHLATMSQGQVLVTAPSNVAVDQLTEKIHT 524
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLKVVR+ AKSREA++S +S L LH Q+ N + + EL+KL+QLK E GELSS+DE++++
Sbjct: 525 TGLKVVRITAKSREALESSISHLTLHEQVANNDTHVELQKLIQLKTEQGELSSSDERKFK 584
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + E+ +L NADVICCTCVG GDPRL KIKF ++LIDE+ QATEPECM+P+ G KQ
Sbjct: 585 SLTRACEREILTNADVICCTCVGCGDPRLSKIKFRTVLIDEATQATEPECMIPLTFGVKQ 644
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
L++VGDH QLGP +M KKAARAGL+QSLFERLV+LG RP RL+VQYRMHP LS+FPSN F
Sbjct: 645 LVMVGDHSQLGPTIMSKKAARAGLTQSLFERLVLLGNRPIRLQVQYRMHPCLSEFPSNMF 704
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV A ER +DFPWP P PM F+ GQEEI+ SGTS++NRTEA+NVEK+
Sbjct: 705 YEGSLQNGVTAPERIKKNVDFPWPQPTTPMYFHQNLGQEEISSSGTSFLNRTEAANVEKV 764
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TR + G+ P QIG++TPYEGQRA++ +M + GSL ++Y++IEVASVDAFQGREKD
Sbjct: 765 VTRLFKSGVMPHQIGIVTPYEGQRAYIANYMLFNGSLKKELYKDIEVASVDAFQGREKDY 824
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK LW+ LL YKE+
Sbjct: 825 ILLSCVRSNEHQGIGFLNDPRRLNVALTRAKYGLVILGNPKVLSKHALWHYLLTHYKEKG 884
Query: 931 VLVEGPLNNLKESLILFSKPKQYFKKN 957
LVEGPL+NL+ SLI SKP++ + ++
Sbjct: 885 CLVEGPLSNLQPSLIQLSKPRRPYNRS 911
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 1142 bits (2954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/976 (57%), Positives = 702/976 (71%), Gaps = 106/976 (10%)
Query: 4 DAYGPSSQTLTFLDTEETD--LIGGDTQGSEFDF-TDFTLPSQSQTQASQLDSVNQIQVN 60
D YG S +L F+DT + D L+ G TQ S+F+F FTLPSQ T +V
Sbjct: 7 DEYGTPSLSLNFVDTPDGDSSLLHGATQDSQFEFDQQFTLPSQGWTSTLP-------EVG 59
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEF-FNKELPPHACKYCGIHDPAYVIMCNIC 119
G Q+ EL F +EE EF +LP HAC+YCGIHDPA V MC +C
Sbjct: 60 GDQS-------------QELVFVDEE----EFSVPGQLPTHACRYCGIHDPATVAMCMVC 102
Query: 120 KKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAK 179
+KWFCNGRG TS HI+ HLVR++HKEV+LHK+G LGETVLECY CG +NIF+LG+IPAK
Sbjct: 103 EKWFCNGRGSTSAGHIVIHLVRSQHKEVSLHKEGALGETVLECYQCGSKNIFMLGYIPAK 162
Query: 180 ADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSA 239
AD+VVV+LCR+PCA Q LKD +W ++WKPLI+DR LSWLVK+P+EQEQ R RQ+++
Sbjct: 163 ADTVVVVLCRSPCANQAVLKDHSWQVDEWKPLISDRQLLSWLVKIPSEQEQLRARQISAV 222
Query: 240 QIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRL 299
QI +LEE+WK++ +A F+DLE+PG+DE+P
Sbjct: 223 QINRLEELWKEDPKAVFEDLERPGMDEEP------------------------------- 251
Query: 300 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQT 359
E+V ++++ D YQY+ +F PLVK EADYD+R KESQT
Sbjct: 252 ------EHVQLKYE------------------DAYQYKRVFEPLVKAEADYDRREKESQT 287
Query: 360 QENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIP 418
Q VRWD+GLN+K A+F L K ++G M+LM GDEL+L++S A WS +G VIKIP
Sbjct: 288 QSVGHVRWDIGLNRKPQAFFQLPKFSEGSMKLMLGDELRLKHSQTAGGEWSSVGCVIKIP 347
Query: 419 DNFGDEVGLELKSSA-GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
DN DEVG+E++ A PT+ T F+ +F+W STSF+RMQ AL D+ VS +IYH
Sbjct: 348 DNHNDEVGIEMRLKAENVPTDTRTNFTCEFVWNSTSFERMQAALSLLGQDEDCVSQFIYH 407
Query: 478 RLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
+L+GH++D+++F+ LPK FS P LP+LN SQV+AVK +QRPLSLIQGPPGTGKTVTSA
Sbjct: 408 KLMGHDIDDIIFKVSLPKRFSVPGLPELNHSQVHAVKTVLQRPLSLIQGPPGTGKTVTSA 467
Query: 538 TIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHN 597
TIVY LVKQT VLVCAPSNIAVDQL EKIHRTGLKVVR+CAKSRE +DSPV+FLALHN
Sbjct: 468 TIVYHLVKQTNGQVLVCAPSNIAVDQLAEKIHRTGLKVVRLCAKSRETLDSPVAFLALHN 527
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
Q+R + +EL KL QLKEE GEL+ ADE+R+R L+ E LL ADVICCTCV A D
Sbjct: 528 QLRALHGAAELHKLQQLKEEMGELADADERRFRALRIAKECQLLTAADVICCTCVSAADS 587
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
RL ++ +LIDES QATEPE MV V+ G +QL+LVGDHCQLGPV+MCKKAA+AGLSQS
Sbjct: 588 RLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVGDHCQLGPVIMCKKAAKAGLSQS 647
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC----------------- 760
LFERLV+LG RP RL+VQYRMHP LS FPSN FYEGSLQNGV
Sbjct: 648 LFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSLQNGVTEGKHLSMKRKEVINLSH 707
Query: 761 ----ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
+ ER+L ID+ WPVPDKPM+F+ GQEE++ SGTS++NRTEA+NVEK+ TRF++
Sbjct: 708 MCFISGERQLIGIDWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFLK 767
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCV 876
G+KPEQIG+ITPYEGQR+++VQ MQ QG+L +K+Y E+EVA+VDAFQGREKD+II++CV
Sbjct: 768 AGLKPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQGREKDIIIVTCV 827
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
RSNDHQGIGFLND RRLNVALTRAK+G+I++GN KVLS+ PLWN LL+ +KE+ LVEGP
Sbjct: 828 RSNDHQGIGFLNDSRRLNVALTRAKFGLIIVGNAKVLSRHPLWNYLLSMFKEKGCLVEGP 887
Query: 937 LNNLKESLILFSKPKQ 952
LNNLK S I SKP++
Sbjct: 888 LNNLKPSPITLSKPRR 903
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/876 (61%), Positives = 662/876 (75%), Gaps = 62/876 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
+E ++DG+ +LPPHAC YCGIH PA V+ C +C KWFCN RG+TS SHI+NHLVR
Sbjct: 74 LDEMKEDGH----VDLPPHACSYCGIHSPASVVKCLVCSKWFCNSRGNTSASHIVNHLVR 129
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
AKHKEV LH + PLGET+ ECY CG +N+F LGFIPAK+D+VVVLLCR PCAA + KD+
Sbjct: 130 AKHKEVILHAESPLGETIPECYNCGSKNVFTLGFIPAKSDTVVVLLCRQPCAAVS--KDI 187
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
+W+ W PLI DR+FLSWLVK PTE EQ R RQV+ QI +LE++W+DNA+AT +DLEK
Sbjct: 188 SWNASLWNPLIDDRTFLSWLVKPPTETEQLRARQVSFTQINRLEDLWRDNAQATLEDLEK 247
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
PGVD++P + V R++
Sbjct: 248 PGVDDEP-------------------------------------QQVIPRYE-------- 262
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D YQYQNIFGPLVK+EADYDKRLKESQTQ ++ VRWD+GLN+K +A+F++
Sbjct: 263 ----------DAYQYQNIFGPLVKIEADYDKRLKESQTQSDIIVRWDLGLNQKRVAWFTM 312
Query: 382 AKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
K + G++RL GDEL+LRY+ + K W +GHVIKIP+N DE+ LEL+ S G PT+ T
Sbjct: 313 PKLESGEVRLAVGDELRLRYAGEMHKPWECIGHVIKIPNNVSDEIALELRRSDGVPTDCT 372
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F DF+WKSTSFDRMQLA++ FAVD++SVS YIY +LLGH ++ + R +PK FSAP
Sbjct: 373 HNFVADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYLKLLGHELEPQVIRTTMPKRFSAP 432
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+YAVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+A
Sbjct: 433 GLPELNHSQMYAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNHGQVLVCAPSNVA 492
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQLTEKIH TGLKVVR+ AKSREA+DS +SFL LH Q+ N + EL+KL+QLK E GE
Sbjct: 493 VDQLTEKIHATGLKVVRLTAKSREALDSSISFLTLHQQVANSTSHVELQKLIQLKNEQGE 552
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DE++Y+ L + EK +L ADVIC TCVGAGD RL K KF ++LIDE+ QA EPEC
Sbjct: 553 LSSNDERKYKALVRTCEKEILAAADVICTTCVGAGDLRLSKFKFRTVLIDEATQAAEPEC 612
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ +LVGDH QLGPV+M KKAARAGL+QSLFERLV++G RP RL+VQYRMHP
Sbjct: 613 MIPLVLGCKQAVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVLIGNRPIRLQVQYRMHP 672
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEG+LQNGV A ER +DFPWP PD PM FY GQEEI+ SGTS++N
Sbjct: 673 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPAPDTPMFFYQNLGQEEISSSGTSFLN 732
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKI T+F + G+ P QIGVITPYEGQR+++V +MQ+ GSL +Y+EIEVASV
Sbjct: 733 RTEAANVEKIVTKFFKSGVVPSQIGVITPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASV 792
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW+
Sbjct: 793 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWH 852
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LL YKE+ LV+GPL+NL+ S+I FS+P++ K
Sbjct: 853 YLLTHYKEKNCLVDGPLSNLQPSMIQFSRPRKALSK 888
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 1141 bits (2952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/877 (61%), Positives = 665/877 (75%), Gaps = 60/877 (6%)
Query: 87 DDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKH 144
+DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSGSHI+NHLVRAKH
Sbjct: 143 EDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 202
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
KEV LHKD PLGET+LECY CG RN+F+LGFI AK ++VVVLLCR PC + N+LKDMNWD
Sbjct: 203 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKLENVVVLLCREPCLSVNALKDMNWD 262
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N +A+ +DLEKPGV
Sbjct: 263 LSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGV 322
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P V+L+YED YQYQN+F PL+KLEADYDK KESQ+++NVTVRWD+GLNKK +AYF
Sbjct: 323 DDEPQPVVLKYEDAYQYQNVFAPLIKLEADYDKMTKESQSKDNVTVRWDIGLNKKRVAYF 382
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
K D + ++L + RL+ + T W +S+ +
Sbjct: 383 VFPKEDNE-----------LRLVPGDELRLRYPGDSSHPT--W------QSVGHV----- 418
Query: 385 DGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFS 444
++L +E+ L EL++S G PTE GFS
Sbjct: 419 ---IKLTAQEEVAL-----------------------------ELRASQGVPTELNVGFS 446
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
VDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+
Sbjct: 447 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPE 506
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQV AVK +Q+P+SLIQGPPGTGKTVTS IVY + KQ VLVCAPSN+AVDQL
Sbjct: 507 LNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSGAIVYHMAKQGQGQVLVCAPSNVAVDQL 566
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETGELS 622
EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SE KL QLK+E GELS
Sbjct: 567 AEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEFHKLQQLKDEQGELS 626
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
S+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LIDES QATEPEC++
Sbjct: 627 SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLI 686
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPEL 742
P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++PFRL+VQYRMHP L
Sbjct: 687 PLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCL 746
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRT 802
S+FPSN FYEG+LQNGV +ER S IDFPWPVP++PM FYV GQEEI+ SGTSY+NRT
Sbjct: 747 SEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 806
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL ++Y+EIEVASVD+
Sbjct: 807 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDS 866
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GNPKVLSKQPLWN+L
Sbjct: 867 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 926
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
L YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 927 LTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 963
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/877 (61%), Positives = 665/877 (75%), Gaps = 60/877 (6%)
Query: 87 DDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKH 144
+DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSGSHI+NHLVRAKH
Sbjct: 143 EDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 202
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
KEV LHKD PLGET+LECY CG RN+F+LGFI AK ++VVVLLCR PC + N+LKDMNWD
Sbjct: 203 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKLENVVVLLCREPCLSVNALKDMNWD 262
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N +A+ +DLEKPGV
Sbjct: 263 LSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGV 322
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P V+L+YED YQYQN+F PL+KLEADYDK KESQ+++NVTVRWD+GLNKK +AYF
Sbjct: 323 DDEPQPVVLKYEDAYQYQNVFAPLIKLEADYDKMTKESQSKDNVTVRWDIGLNKKRVAYF 382
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
K D + ++L + RL+ + T W +S+ +
Sbjct: 383 VFPKEDNE-----------LRLVPGDELRLRYPGDSSHPT--W------QSVGHV----- 418
Query: 385 DGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFS 444
++L +E+ L EL++S G PTE GFS
Sbjct: 419 ---IKLTAQEEVAL-----------------------------ELRASQGVPTELNVGFS 446
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
VDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+
Sbjct: 447 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPE 506
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQV AVK +Q+P+SLIQGPPGTGKTVTS IVY + KQ VLVCAPSN+AVDQL
Sbjct: 507 LNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSGAIVYHMAKQGQGQVLVCAPSNVAVDQL 566
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETGELS 622
EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SE KL QLK+E GELS
Sbjct: 567 AEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEFHKLQQLKDEQGELS 626
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
S+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LIDES QATEPEC++
Sbjct: 627 SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLI 686
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPEL 742
P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++PFRL+VQYRMHP L
Sbjct: 687 PLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCL 746
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRT 802
S+FPSN FYEG+LQNGV +ER S IDFPWPVP++PM FYV GQEEI+ SGTSY+NRT
Sbjct: 747 SEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 806
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL ++Y+EIEVASVD+
Sbjct: 807 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDS 866
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GNPKVLSKQPLWN+L
Sbjct: 867 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 926
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
L YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 927 LTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 963
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 1140 bits (2949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/877 (61%), Positives = 665/877 (75%), Gaps = 60/877 (6%)
Query: 87 DDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKH 144
+DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSGSHI+NHLVRAKH
Sbjct: 143 EDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 202
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
KEV LHKD PLGET+LECY CG RN+F+LGFI AK ++VVVLLCR PC + N+LKDMNWD
Sbjct: 203 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKLENVVVLLCREPCLSVNALKDMNWD 262
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N +A+ +DLEKPGV
Sbjct: 263 LSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGV 322
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P V+L+YED YQYQN+F PL+KLEADYDK KESQ+++NVTVRWD+GLNKK +AYF
Sbjct: 323 DDEPQPVVLKYEDAYQYQNVFAPLIKLEADYDKMTKESQSKDNVTVRWDIGLNKKRVAYF 382
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
K D + ++L + RL+ + T W +S+ +
Sbjct: 383 VFPKEDNE-----------LRLVPGDELRLRYPGDSSHPT--W------QSVGHV----- 418
Query: 385 DGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFS 444
++L +E+ L EL++S G PTE GFS
Sbjct: 419 ---IKLTAQEEVAL-----------------------------ELRASQGVPTELNVGFS 446
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
VDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+
Sbjct: 447 VDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPE 506
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQV AVK +Q+P+SLIQGPPGTGKTVTS IVY + KQ VLVCAPSN+AVDQL
Sbjct: 507 LNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSGAIVYHMAKQGQGQVLVCAPSNVAVDQL 566
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETGELS 622
EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SE KL QLK+E GELS
Sbjct: 567 AEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEFHKLQQLKDEQGELS 626
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
S+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LIDES QATEPEC++
Sbjct: 627 SSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLI 686
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPEL 742
P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++PFRL+VQYRMHP L
Sbjct: 687 PLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPCL 746
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRT 802
S+FPSN FYEG+LQNGV +ER S IDFPWPVP++PM FYV GQEEI+ SGTSY+NRT
Sbjct: 747 SEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRT 806
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL ++Y+EIEVASVD+
Sbjct: 807 EAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDS 866
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GNPKVLSKQPLWN+L
Sbjct: 867 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSL 926
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
L YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 927 LTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 963
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/969 (57%), Positives = 696/969 (71%), Gaps = 103/969 (10%)
Query: 27 DTQG-SEFDFTDF----TLPSQSQTQASQLDSVNQIQVNGKQNLDNSN------------ 69
+TQG S+FD+ +F T P+ S + A+ SV+ + + NS+
Sbjct: 28 NTQGESDFDYPEFRSPVTWPTPSDSLAATSSSVDPTSSDHRAAASNSDHHSDSPAASKSA 87
Query: 70 ----LNLVSQKLHE--------LQFEEE-EDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
N +Q + E L FEE +DDG +F + HAC+YCG+ +PA V+ C
Sbjct: 88 ARGGANSGTQGVVEGLVASMGGLNFEETGDDDGYDFGKGDFTEHACRYCGVSNPACVVRC 147
Query: 117 NI--CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLG 174
N+ C+KWFCN RG+TSGSHI+NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LG
Sbjct: 148 NVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLG 207
Query: 175 FIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGR 234
FI AK +SVVVLLCR PC N+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R R
Sbjct: 208 FISAKTESVVVLLCREPCLNVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRAR 267
Query: 235 QVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEAD 294
Q+++ QI K+EE+WK N +AT +DLEKPGVD++P V L+YED YQYQN+F PL+KLEAD
Sbjct: 268 QISAQQINKVEELWKTNPDATLEDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEAD 327
Query: 295 YDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRL 354
YDK +KESQ+++NVT+RWD+GLNKK +AYF K D + ++L + RL
Sbjct: 328 YDKMMKESQSKDNVTIRWDIGLNKKRVAYFVFPKEDNE-----------LRLVPGDELRL 376
Query: 355 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHV 414
+ S GD A W +GHV
Sbjct: 377 RYS----------------------------GDA---------------AHPAWQSVGHV 393
Query: 415 IKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAY 474
IK+ +EV LEL++S G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS Y
Sbjct: 394 IKLTAQ--EEVALELRASQGVPVDMNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGY 451
Query: 475 IYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTV 534
IYH LLGH V+ R LP+ F AP LP+LN SQV AVK+ +Q+P+SLIQGPPGTGKTV
Sbjct: 452 IYHHLLGHEVENQTVRSALPRRFGAPGLPELNASQVLAVKNVLQKPISLIQGPPGTGKTV 511
Query: 535 TSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLA 594
TSA I VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L
Sbjct: 512 TSAAI-----------VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLT 560
Query: 595 LHNQIRNMEMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
LH Q+R+++ + SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCV
Sbjct: 561 LHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCV 620
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGDPRL +F +LIDES QATEPEC++P++LGAKQ++ VGDHCQLGPV+MCKKAARA
Sbjct: 621 GAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQVVFVGDHCQLGPVIMCKKAARA 680
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ S IDFP
Sbjct: 681 GLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQSSGIDFP 740
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ--IGVITPY 830
WPVP++PM FYV GQEEI+ SGTSY+NRTEA+NVEKI T F+R G+ P Q IGVITPY
Sbjct: 741 WPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQACIGVITPY 800
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
EGQRA++V +M G+L ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDP
Sbjct: 801 EGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDP 860
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
RRLNVALTRA+YGI+++GNPKVLSKQPLWN+LL YKE + LVEGPLNNLK+S++ F KP
Sbjct: 861 RRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKP 920
Query: 951 KQYFKKNNM 959
K+ + +
Sbjct: 921 KKIYNDRRL 929
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/890 (61%), Positives = 669/890 (75%), Gaps = 67/890 (7%)
Query: 80 LQFEEEE-----DDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSG 132
L FEE +DG ++ + HAC+YCGIH PA V CN+ C+KWFCN RG+TSG
Sbjct: 128 LSFEEPPGAGAGEDGYDYGKGDFVEHACRYCGIHSPACVARCNVPSCRKWFCNSRGNTSG 187
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SH++NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AKA++VVVLLCR PC
Sbjct: 188 SHLVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPC 247
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
N+LKDMNWD QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N
Sbjct: 248 LNVNALKDMNWDLSQWLPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTN- 306
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
P LE D +K + + Q V +++
Sbjct: 307 ----------------------------------PDASLE-DLEKPGVDDEPQP-VVLKY 330
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
+ D YQYQN+F PL+KLEADYDK +KESQ++++VTVRWD+GLN
Sbjct: 331 E------------------DAYQYQNVFAPLIKLEADYDKMMKESQSKDSVTVRWDIGLN 372
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKIPDNFGDEVGLELKS 431
KK +AYF K D ++RL+ GDEL+LRYS S W +GHVIK+ +EV LEL++
Sbjct: 373 KKRVAYFVFPKEDNELRLVPGDELRLRYSGGTSHPAWQSVGHVIKLTAQ--EEVALELRA 430
Query: 432 SAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC 491
S G P E + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R
Sbjct: 431 SQGVPVELSHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRN 490
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
LPK F AP LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ V
Sbjct: 491 TLPKRFGAPGLPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQV 550
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELK 609
LVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SE+
Sbjct: 551 LVCAPSNVAVDQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEMH 610
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
KL QLK+E GELSS+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LI
Sbjct: 611 KLQQLKDEQGELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLI 670
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
DES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++P
Sbjct: 671 DESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKP 730
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
FRL+VQYRMHP LS+FPSN FYEG+LQNGV +ER+ + IDFPWPVP++PM FYV G E
Sbjct: 731 FRLQVQYRMHPCLSEFPSNCFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGVE 790
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
EI+ SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL
Sbjct: 791 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQ 850
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+V+GN
Sbjct: 851 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVVLGN 910
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
PKVLSKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 911 PKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 960
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/871 (61%), Positives = 660/871 (75%), Gaps = 56/871 (6%)
Query: 87 DDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKE 146
DD + + LP HAC YCGI +P+ V+ C IC KWFCN RG TSGSHI+NHLVRAKHKE
Sbjct: 119 DDSDLLSFQNLPEHACAYCGIFNPSCVVKCLICNKWFCNSRGSTSGSHIVNHLVRAKHKE 178
Query: 147 VTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQE 206
V+LH D PLGET+ ECY CGV+N+F+LGFIPAK+++VVVLLCR PCAA ++ KD+ WD
Sbjct: 179 VSLHADSPLGETMPECYNCGVKNVFLLGFIPAKSETVVVLLCRQPCAAMSNSKDVIWDTT 238
Query: 207 QWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDE 266
QW PLI DR FL+WLVKVPTE EQ R R VT QI +LEE+WK+NA A+ +DL+KPGVD+
Sbjct: 239 QWSPLIQDRCFLTWLVKVPTEHEQLRARPVTLQQINRLEELWKENANASLEDLDKPGVDQ 298
Query: 267 DPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 326
+P+ +LL QY+
Sbjct: 299 EPNGILL------QYE-------------------------------------------- 308
Query: 327 AKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD- 385
D YQYQNIFGPLVK+EADYD++LKESQTQ+++ VRWD GLN+K IA+ L K +
Sbjct: 309 -----DAYQYQNIFGPLVKIEADYDRKLKESQTQQDLVVRWDQGLNQKKIAWMMLPKLES 363
Query: 386 GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSV 445
G++RL GDELKLRY + + W G+GHVIKIP+N DEV LELK S G P T F
Sbjct: 364 GEVRLAVGDELKLRYRGEIAPPWQGVGHVIKIPNNVSDEVALELKRSDGVPDHCTHNFFA 423
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 505
DF+WK+TSFDRMQ A++ FAVD+QS+S YIYH+LLGH ++ R +PK FSAP LP+L
Sbjct: 424 DFVWKATSFDRMQSAMKTFAVDEQSLSGYIYHKLLGHEIESATLRTTMPKRFSAPGLPEL 483
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLT 565
N SQV AVK +Q+PLSLIQGPPGTGKTVTSATIVYQL K VLVCAPSN+AVDQL
Sbjct: 484 NHSQVNAVKSVLQKPLSLIQGPPGTGKTVTSATIVYQLSKMNPGAVLVCAPSNVAVDQLC 543
Query: 566 EKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSAD 625
EKIH TGLKVVR+ AKSREA+DSP+SFL LH Q+ N + + EL+KL+QLK E GELSS+D
Sbjct: 544 EKIHLTGLKVVRLSAKSREALDSPISFLTLHEQVANNDTHIELQKLIQLKNEQGELSSSD 603
Query: 626 EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI 685
E++Y+ L + EK +L ADVICCTCVG GDPRL KIKF ++L+DE+ QA EPE M+P++
Sbjct: 604 ERKYKALTRACEKEILSTADVICCTCVGCGDPRLSKIKFRTVLVDEATQAAEPEVMIPLV 663
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKF 745
+G KQ++ VGDH QLGPV+M KKAARAGLSQSLFERL++LG RP RL+VQYRMHP LS+F
Sbjct: 664 MGCKQVVFVGDHLQLGPVIMNKKAARAGLSQSLFERLIMLGNRPIRLQVQYRMHPCLSEF 723
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS 805
PSN FYEG+LQNGV A ER ++DFPWPVP PM F+ GQEEI+ SGTS++NRTEAS
Sbjct: 724 PSNMFYEGTLQNGVTAPERLRREVDFPWPVPWLPMFFFQNLGQEEISSSGTSFLNRTEAS 783
Query: 806 NVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
NVEKI TRF + G+KP QIG++TPYEGQR+++V HMQ GSL ++Y+++EVASVDAFQG
Sbjct: 784 NVEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQLHGSLKKELYKQVEVASVDAFQG 843
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
REKD II+SCVRSN+HQGIGFL+DPRRLNVALTRA+YG++++GNPKVL+K PLW+ LL
Sbjct: 844 REKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARYGLVILGNPKVLNKHPLWHYLLVH 903
Query: 926 YKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
YKE+ LVEG L+NL+ S+I F KP++ +K
Sbjct: 904 YKEKGCLVEGVLSNLQASMIQFPKPRRPLQK 934
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 1136 bits (2938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/893 (60%), Positives = 667/893 (74%), Gaps = 59/893 (6%)
Query: 65 LDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFC 124
L + NL+ S L + +E D ++LP HAC YCGI +P+ V+ C IC KWFC
Sbjct: 96 LTHDNLHGASTHLSDAGIGDEPDPA---LLQDLPEHACAYCGIFNPSCVVKCLICNKWFC 152
Query: 125 NGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV 184
N RG TSGSHI+NHLVRAKHKEV LH + PLGET ECY CG +N F+LGFIPAK+++VV
Sbjct: 153 NSRGSTSGSHIVNHLVRAKHKEVCLHAESPLGETTPECYNCGAKNAFLLGFIPAKSETVV 212
Query: 185 VLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
VLLCR PCAA ++ KD+ WD QW PLI DR FL+WLVKVP+E EQ R R VT QI +L
Sbjct: 213 VLLCRQPCAAMSNSKDIIWDTTQWSPLIEDRCFLTWLVKVPSEHEQLRARPVTLHQINRL 272
Query: 245 EEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQT 304
EE+WKDNA A+ +DL+KPGV+E+P+
Sbjct: 273 EELWKDNASASLEDLDKPGVEEEPN----------------------------------- 297
Query: 305 QENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVT 364
+V +R++ D YQYQNIFGPLVK+EADYD++LKESQTQ+++
Sbjct: 298 --SVLLRYE------------------DAYQYQNIFGPLVKMEADYDRKLKESQTQQDLV 337
Query: 365 VRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGD 423
+RWD GLN+K IA+ +L K + G++RL GDELKLRY + + W G+GHVIKIP+N D
Sbjct: 338 IRWDQGLNQKKIAFMTLPKLESGEVRLAVGDELKLRYRGELAPPWEGVGHVIKIPNNLSD 397
Query: 424 EVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN 483
EV LELK + G P T F DF+WK+TSFDRMQ A++ FAVD+QS+SAYIYH+LLGH
Sbjct: 398 EVALELKRADGVPDHCTHNFFADFVWKATSFDRMQSAMKTFAVDEQSLSAYIYHKLLGHE 457
Query: 484 VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL 543
++ R +PK FSAP LP+LN SQV AVK +Q+PLSLIQGPPGTGKTVTSA+IVYQL
Sbjct: 458 IENSTLRTTMPKRFSAPGLPELNHSQVNAVKSVLQKPLSLIQGPPGTGKTVTSASIVYQL 517
Query: 544 VKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNME 603
K PVLVCAPSN+AVDQLTEKIH TGLKVVR+ AKSREA+DSP+SFL LH Q+ N +
Sbjct: 518 SKMNPGPVLVCAPSNVAVDQLTEKIHMTGLKVVRLTAKSREALDSPISFLTLHEQVANND 577
Query: 604 MNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
N EL+KL+QLK E GELSS+DE++ + L + EK +L ADVICCTCVG GDPRL KIK
Sbjct: 578 TNIELQKLIQLKNEQGELSSSDERKCKALIRACEKEILSTADVICCTCVGCGDPRLAKIK 637
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++L+DE+ QA EPECM+P+++G KQ++ VGDH QLGPV+M KK ARAG SQSLFERL+
Sbjct: 638 FRTVLVDEATQAAEPECMIPLVMGCKQVVFVGDHLQLGPVIMNKKVARAGASQSLFERLI 697
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY 783
+LG RP RL+VQYRMHP LS+FPSN FYEG+LQNGV A ER +DFPWPVP PMLF+
Sbjct: 698 MLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAPERLRKDVDFPWPVPSLPMLFF 757
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQY 843
GQEEI+ SGTS++NRTEASNVEKI TRF + G+KP QIG++TPYEGQR+++V HMQ
Sbjct: 758 QNLGQEEISSSGTSFLNRTEASNVEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQL 817
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
GSL ++Y+E+EVASVDAFQGREKD II+SCVRSN+HQGIGFL+DPRRLNVALTRA+YG
Sbjct: 818 HGSLKKELYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLSDPRRLNVALTRARYG 877
Query: 904 IIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
++++GNPKVL+K PLW+ LL YKE+ LVEG L+NL+ S++ F KP++ +K
Sbjct: 878 LVILGNPKVLNKHPLWHYLLVHYKEKGCLVEGVLSNLQPSMMQFPKPRRPLQK 930
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/895 (60%), Positives = 670/895 (74%), Gaps = 61/895 (6%)
Query: 70 LNLVSQKLHELQFEEE-EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNG 126
++ ++ + L FEE +DDG ++ + HACKYCGI +PA V+ CN+ C+KWFCN
Sbjct: 107 VDALAAGMGNLNFEETGDDDGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNS 166
Query: 127 RGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVL 186
RG+TSGSHI+NHLVRAKHKEV LH+D PLGET+LECY CG RN+F+LGFI AK DSVVVL
Sbjct: 167 RGNTSGSHIVNHLVRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVL 226
Query: 187 LCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEE 246
LCR PC N+LKDMNWD QW PLI DR FL WLVKVP+EQEQ R RQ+++ QI K+EE
Sbjct: 227 LCRDPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEE 286
Query: 247 VWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
+WK N +AT +DLEKPGVD++P V +YED YQYQN+F PL+KLEADYDK +KESQ++E
Sbjct: 287 LWKTNPDATLEDLEKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKE 346
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 366
N+TVRWD+GLNKK +AYF K + + ++L + RL+ S
Sbjct: 347 NLTVRWDIGLNKKRVAYFVFPKEENE-----------LRLVPGDELRLRYS--------- 386
Query: 367 WDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVG 426
GD A W +GHVIK+ +EV
Sbjct: 387 -------------------GDT---------------AHPAWQSVGHVIKLTAQ--EEVA 410
Query: 427 LELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 486
LEL+++ G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+
Sbjct: 411 LELRANQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEA 470
Query: 487 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
+ R LP+ F P LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ
Sbjct: 471 QMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQ 530
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN- 605
VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ +
Sbjct: 531 GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSE 590
Query: 606 -SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF 664
SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGA D RL +F
Sbjct: 591 KSELHKLQQLKDEQGELSSSDEKKYKNLKRQTEREITQSADVICCTCVGAADLRLSNFRF 650
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
+LIDES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+
Sbjct: 651 RQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVL 710
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
LGI+P RL+VQYRMHP LS+FPSN FYEG+LQNGV ER+ + IDFPWPVP++PM FYV
Sbjct: 711 LGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYV 770
Query: 785 TQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
GQEEI+ SGTSY+NRTEA+NVEK+ T F++ G+ P QIGVITPYEGQRA++V +M
Sbjct: 771 QLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARN 830
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
GSL ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI
Sbjct: 831 GSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 890
Query: 905 IVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
+++GNPKVLSKQPLWN LL YKE + LVEGPLNNLK+S++ F KP++ + +
Sbjct: 891 VILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRKIYNDRRL 945
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/895 (60%), Positives = 671/895 (74%), Gaps = 61/895 (6%)
Query: 70 LNLVSQKLHELQFEEE-EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNG 126
++ ++ + L FEE +DDG ++ + HACKYCGI +PA V+ CN+ C+KWFCN
Sbjct: 96 VDALAAGVGNLNFEETGDDDGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNS 155
Query: 127 RGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVL 186
RG+TSGSHI+NHLVRAKHKEV LH+D PLGET+LECY CG RN+F+LGFI AK DSVVVL
Sbjct: 156 RGNTSGSHIVNHLVRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVL 215
Query: 187 LCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEE 246
LCR PC N+LKDMNWD QW PLI DR FL WLVKVP+EQEQ R RQ+++ QI K+EE
Sbjct: 216 LCRDPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEE 275
Query: 247 VWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
+WK N +AT +DLEKPGVD++P V +YED YQYQN+F PL+KLEADYDK +KESQ++E
Sbjct: 276 LWKTNPDATLEDLEKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKE 335
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 366
N+TVRWD+GLNKK +AYF K + + ++L + RL+ S
Sbjct: 336 NLTVRWDIGLNKKRVAYFVFPKEENE-----------LRLVPGDELRLRYS--------- 375
Query: 367 WDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVG 426
GD + +W +GHVIK+ +EV
Sbjct: 376 --------------------------GDAVH--------PSWQSVGHVIKLTAQ--EEVA 399
Query: 427 LELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 486
LEL+++ G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+
Sbjct: 400 LELRANQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEA 459
Query: 487 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
+ R LP+ F P LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ
Sbjct: 460 QMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQ 519
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN- 605
VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV +L LH Q+R+++ +
Sbjct: 520 GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSE 579
Query: 606 -SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF 664
SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGA D RL +F
Sbjct: 580 KSELHKLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRF 639
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
+LIDES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV
Sbjct: 640 RQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVT 699
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
LGI+P RL+VQYRMHP LS+FPSN FYEG+LQNGV ER+ + IDFPWPVP++PM FYV
Sbjct: 700 LGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYV 759
Query: 785 TQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
GQEEI+ SGTSY+NRTEA+NVEK+ T F++ G+ P QIGVITPYEGQRA++V +M
Sbjct: 760 QLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARN 819
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
GSL ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI
Sbjct: 820 GSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 879
Query: 905 IVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
+++GNPKVLSKQPLWN LL YKE + LVEGPLNNLK+S++ F KP++ + +
Sbjct: 880 VILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRKIYNDRRL 934
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/861 (61%), Positives = 657/861 (76%), Gaps = 56/861 (6%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLG 156
LP HAC YCGI +PA V+ C +C KWFCN RG TSGSHI+NHLVRAKHKEV LH + PLG
Sbjct: 131 LPEHACAYCGIFNPACVVKCLVCNKWFCNSRGSTSGSHIVNHLVRAKHKEVCLHVESPLG 190
Query: 157 ETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS 216
ET ECY CG +N+F+LGFIPAK+++VVVLLCR PCAA ++ KD+ WD QW PLI DR
Sbjct: 191 ETTPECYNCGAKNVFLLGFIPAKSETVVVLLCRQPCAAMSNSKDVIWDTSQWSPLIEDRC 250
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
FL+WLVKVPTE EQ R R +T QI +LEEVWKDNA A+ +DL+KPGVDE+P+
Sbjct: 251 FLTWLVKVPTEHEQLRARPITLQQINRLEEVWKDNANASLEDLDKPGVDEEPN------- 303
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQY 336
G L++ E D YQY
Sbjct: 304 ---------GILLRYE---------------------------------------DAYQY 315
Query: 337 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDE 395
QNIFGPLVK+EADYD++LKESQTQ+++ VRWD GLN+K IA+ L K + G++RL GDE
Sbjct: 316 QNIFGPLVKIEADYDRKLKESQTQQDLVVRWDQGLNQKRIAWMMLPKLESGEVRLAVGDE 375
Query: 396 LKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFD 455
LKLRY + + W G+GHVIKIP+N DE+ LELK S G P T F DF+WK+TSFD
Sbjct: 376 LKLRYRGEMAPPWEGVGHVIKIPNNVSDEIALELKRSDGVPDHCTHNFCADFVWKATSFD 435
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
RMQ A++ FA+D++S+SA IYH+LLG ++D+ + R +PK FSAP LP+LN SQV AVK
Sbjct: 436 RMQSAMKTFAIDEESLSAPIYHKLLGRDIDQGMLRTTMPKRFSAPGLPELNHSQVNAVKS 495
Query: 516 AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKV 575
+++PLSLIQGPPGTGKTVTSA+IVYQL K PVLVCAPSN+AVDQLTEKIH TGLKV
Sbjct: 496 VLKKPLSLIQGPPGTGKTVTSASIVYQLSKMNPGPVLVCAPSNVAVDQLTEKIHATGLKV 555
Query: 576 VRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKN 635
VR+ AKSREA+DSP+ FL LH Q+ N + + EL+KL+QLK E GELSS+DE++Y+ L +
Sbjct: 556 VRLTAKSREALDSPIGFLTLHEQVANNDTHVELQKLIQLKNEQGELSSSDERKYKALTRA 615
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
EK +L ADVICCTCVG GDPRL KI F ++L+DE+ QA EPECM+P+++G KQ++ VG
Sbjct: 616 CEKEILSTADVICCTCVGCGDPRLSKINFRTVLVDEATQAAEPECMIPLVMGCKQVVFVG 675
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSL 755
DH QLGPV+M KKAARAGLSQSLFERL++LG RP RLE+QYRMHP LS+FPSN FYEG+L
Sbjct: 676 DHLQLGPVIMNKKAARAGLSQSLFERLIMLGNRPIRLEIQYRMHPCLSEFPSNMFYEGTL 735
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI 815
QNG+ A ER +K+DFPWPVP PM+F+ GQEEI+ SGTS++NRTEASNVEKI TRF
Sbjct: 736 QNGITAQERLRAKVDFPWPVPSLPMMFFQNLGQEEISSSGTSFLNRTEASNVEKIVTRFF 795
Query: 816 RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
+ G++P QIG++TPYEGQR+++V HMQ GSL ++Y+E+EVASVDAFQGREKD II+SC
Sbjct: 796 KAGVEPWQIGIVTPYEGQRSYIVNHMQLHGSLKKELYKEVEVASVDAFQGREKDYIILSC 855
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VRSN+HQGIGFL+DPRRLNVALTRA++G++++GNPKVL+K PLW+ LL YKE+ LVEG
Sbjct: 856 VRSNEHQGIGFLSDPRRLNVALTRARFGLVILGNPKVLNKHPLWHYLLVHYKEKGCLVEG 915
Query: 936 PLNNLKESLILFSKPKQYFKK 956
L+NL+ S++ F KP++ +K
Sbjct: 916 VLSNLQPSVMQFPKPRRPLQK 936
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/895 (60%), Positives = 671/895 (74%), Gaps = 61/895 (6%)
Query: 70 LNLVSQKLHELQFEEE-EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNG 126
++ ++ + L FEE +DDG ++ + HACKYCGI +PA V+ CN+ C+KWFCN
Sbjct: 107 VDALAAGVGNLNFEETGDDDGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNS 166
Query: 127 RGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVL 186
RG+TSGSHI+NHLVRAKHKEV LH+D PLGET+LECY CG RN+F+LGFI AK DSVVVL
Sbjct: 167 RGNTSGSHIVNHLVRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVL 226
Query: 187 LCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEE 246
LCR PC N+LKDMNWD QW PLI DR FL WLVKVP+EQEQ R RQ+++ QI K+EE
Sbjct: 227 LCRDPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEE 286
Query: 247 VWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
+WK N +AT +DLEKPGVD++P V +YED YQYQN+F PL+KLEADYDK +KESQ++E
Sbjct: 287 LWKTNPDATLEDLEKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKE 346
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 366
N+TVRWD+GLNKK +AYF K + + ++L + RL+ S
Sbjct: 347 NLTVRWDIGLNKKRVAYFVFPKEENE-----------LRLVPGDELRLRYS--------- 386
Query: 367 WDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVG 426
GD + +W +GHVIK+ +EV
Sbjct: 387 --------------------------GDAVH--------PSWQSVGHVIKLTAQ--EEVA 410
Query: 427 LELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 486
LEL+++ G P + GFSVDF+WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+
Sbjct: 411 LELRANQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEA 470
Query: 487 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
+ R LP+ F P LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ
Sbjct: 471 QMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQ 530
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN- 605
VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV +L LH Q+R+++ +
Sbjct: 531 GQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSE 590
Query: 606 -SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF 664
SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGA D RL +F
Sbjct: 591 KSELHKLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRF 650
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
+LIDES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV
Sbjct: 651 RQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVT 710
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
LGI+P RL+VQYRMHP LS+FPSN FYEG+LQNGV ER+ + IDFPWPVP++PM FYV
Sbjct: 711 LGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYV 770
Query: 785 TQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
GQEEI+ SGTSY+NRTEA+NVEK+ T F++ G+ P QIGVITPYEGQRA++V +M
Sbjct: 771 QLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARN 830
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
GSL ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI
Sbjct: 831 GSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 890
Query: 905 IVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
+++GNPKVLSKQPLWN LL YKE + LVEGPLNNLK+S++ F KP++ + +
Sbjct: 891 VILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRKIYNDRRL 945
>gi|296423838|ref|XP_002841459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637699|emb|CAZ85650.1| unnamed protein product [Tuber melanosporum]
Length = 1105
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/865 (62%), Positives = 645/865 (74%), Gaps = 60/865 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELP HAC YCGIH P+ V+ C C KWFC+ RG+TS SHIINHLVRA+HKEV+LH L
Sbjct: 78 ELPAHACAYCGIHSPSCVVKCLACNKWFCSARGNTSSSHIINHLVRARHKEVSLHPQSSL 137
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA +S KDMNWD +W+PLI DR
Sbjct: 138 GDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMSSNKDMNWDTSRWQPLIEDR 197
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
SFL WLV PT+ EQ R R ++ I KLEE+WKDNA AT DLEK GVD++P VLLR
Sbjct: 198 SFLPWLVSTPTDAEQLRARHLSPQMIGKLEELWKDNASATVADLEKGAGVDDEPAPVLLR 257
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D Y
Sbjct: 258 --------------------YD-----------------------------------DAY 262
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKESQ+Q+N+ VRWD+GLN K +A F L K + GD++L G
Sbjct: 263 QYQNVFGPLVKIEADYDRKLKESQSQDNLIVRWDLGLNNKHLASFVLPKLELGDVKLAVG 322
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG---APTEATTGFSVDFIWK 450
DE++LRY + W G+G+VIKIP+N DEV LEL+ + G PTE T F D++WK
Sbjct: 323 DEMRLRYIGELRPHWEGVGYVIKIPNNQSDEVTLELRRNGGDKSVPTECTHAFCADYVWK 382
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQLA++ FAVD+ SVS YIYHRLLGH V + +P+ FS P LP+LN SQV
Sbjct: 383 ATSFDRMQLAMKSFAVDEMSVSGYIYHRLLGHAVAAAPLKTSMPRRFSVPGLPELNVSQV 442
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
+AVK + +PLSLIQGPPGTGKTVTSATIVY L K VLVCAPSN+AVDQLTEKIHR
Sbjct: 443 HAVKSVLSKPLSLIQGPPGTGKTVTSATIVYHLAKTNVGQVLVCAPSNVAVDQLTEKIHR 502
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLKVVR+ AKSRE +DSPVSFL+LH Q+R + N EL KL QLK E GELSS DEK+++
Sbjct: 503 TGLKVVRLTAKSREDVDSPVSFLSLHEQVRLNDTNVELVKLGQLKNELGELSSQDEKKFK 562
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L +NAE+ +L NADVICCTCVGAGDPRL K+KF ++LIDES QA EPECM+P++LG KQ
Sbjct: 563 HLTRNAEREILTNADVICCTCVGAGDPRLAKLKFRTVLIDESTQAAEPECMIPLVLGCKQ 622
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAARAGL QSLFERLV+LG P RL VQYRMHP LS+FPSN F
Sbjct: 623 VVLVGDHQQLGPVIMNKKAARAGLHQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMF 682
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEAS EKI
Sbjct: 683 YEGSLQNGVTTQERLRRNVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEASACEKI 742
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G+ P QIG+ITPYEGQR+++V MQ G+L ++Y+EIEVASVDAFQGREKD
Sbjct: 743 ITRFFKAGVLPSQIGIITPYEGQRSYIVSSMQTNGALRKELYKEIEVASVDAFQGREKDY 802
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSNDHQGIGFLNDPRRLNVALTRAK+G++++GNPKVLSK PLW+ LL YK++
Sbjct: 803 IVLSCVRSNDHQGIGFLNDPRRLNVALTRAKFGVVILGNPKVLSKHPLWHYLLLHYKDKN 862
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SLI FSKP+Q ++
Sbjct: 863 CLVEGPLSNLQVSLIQFSKPRQSYR 887
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/875 (61%), Positives = 656/875 (74%), Gaps = 60/875 (6%)
Query: 86 EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHK 145
+++G+ KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HK
Sbjct: 57 KNEGHAEEEKELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHK 116
Query: 146 EVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQ 205
EV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD
Sbjct: 117 EVQLHPGSSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDT 176
Query: 206 EQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GV 264
+W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N++ATF DLEK V
Sbjct: 177 SRWQPLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFADLEKATAV 236
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P VLLR YD
Sbjct: 237 DDEPAPVLLR--------------------YD---------------------------- 248
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K
Sbjct: 249 -------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKL 301
Query: 385 D-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEAT 440
+ GD++L GDE++L+YS + W G+G+VIKIP+N DEV +EL++ PTE T
Sbjct: 302 ELGDVKLAVGDEMRLKYSGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 361
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F+ D++WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + LPK FS P
Sbjct: 362 HNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSVP 421
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+ AVK +QRP+SLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+A
Sbjct: 422 GLPELNGSQINAVKSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVA 481
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GE
Sbjct: 482 VDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKAELGE 541
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DEKR + L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPEC
Sbjct: 542 LSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLSKLKFRTVLIDESTQSAEPEC 601
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP
Sbjct: 602 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHP 661
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEGSLQNGV A +R +DFPWPV D PM+F+ G EEI+ SGTSY+N
Sbjct: 662 CLSQFPSNMFYEGSLQNGVSAIDRLRRDVDFPWPVVDSPMMFWSNLGNEEISASGTSYLN 721
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKI TRF + G+ P+ IG+ITPYEGQR+++V MQ G+ + Y+EIEVASV
Sbjct: 722 RTEATNVEKIVTRFFKAGVHPQDIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASV 781
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN
Sbjct: 782 DAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWN 841
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
LL +KEQ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 842 CLLQHFKEQHCLVEGPLSNLQESLIQFSRPKQAYR 876
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/871 (60%), Positives = 654/871 (75%), Gaps = 56/871 (6%)
Query: 86 EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHK 145
E++ + LP AC YCGIH P+ V+ C C KWFCN RG+TS SHI+ HLVRA+HK
Sbjct: 81 EENKETMAEESLPDWACSYCGIHTPSSVLKCLTCDKWFCNSRGNTSSSHIVKHLVRARHK 140
Query: 146 EVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQ 205
+V LH + PLGET+LECY CG++N+F+LGFIPAK+D+VVVLLCR PCA+ S KDMNWD
Sbjct: 141 DVMLHHNSPLGETILECYNCGIKNVFLLGFIPAKSDTVVVLLCRQPCASAQSSKDMNWDT 200
Query: 206 EQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVD 265
QW+PLI DRSFL WLV +PTE E R RQ+TS QI KLE++WK+N++AT QDLEKPG+D
Sbjct: 201 SQWQPLIDDRSFLPWLVSIPTEHEVLRARQITSYQINKLEDLWKENSKATLQDLEKPGID 260
Query: 266 EDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFS 325
++P VLLRYED YQYQNIFGPLVK+EADYDK++KESQTQ+ + VRWD+GLN+K +AYF
Sbjct: 261 DEPVPVLLRYEDAYQYQNIFGPLVKIEADYDKKVKESQTQDGIVVRWDIGLNQKYVAYFR 320
Query: 326 LAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 385
+ K + L
Sbjct: 321 I-----------------------------------------------KVLEAGDLKVAV 333
Query: 386 GD-MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFS 444
GD MRL RY + W +G+VIKIP+N DEVGLELK S T+ T FS
Sbjct: 334 GDEMRL--------RYLGELRNHWESIGYVIKIPNNISDEVGLELKKSDKIQTDCTHNFS 385
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
+D++WKSTSFDRMQ AL++ A+++ SVS YIYH+LLGH++ ++ + +PK FS+P LP+
Sbjct: 386 IDYVWKSTSFDRMQTALKQLAINEASVSGYIYHKLLGHDIAPLVLKTQMPKRFSSPGLPE 445
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQVYAV+ +Q+PLSLIQGPPGTGKTVTSATIVY L K VLVCAPSN+AVDQL
Sbjct: 446 LNVSQVYAVRSVLQKPLSLIQGPPGTGKTVTSATIVYHLAKMNSGQVLVCAPSNVAVDQL 505
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSA 624
+KIH+TGLKVVRV AKSRE ++SPV+ L LH Q+RN + N+EL+KL+QL++E GELSS
Sbjct: 506 CKKIHQTGLKVVRVSAKSREDLESPVASLTLHEQVRNNDTNTELQKLIQLRDELGELSSQ 565
Query: 625 DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPV 684
DEK+Y+ L K EK +L NADVIC TCVG GDPRL K KF ++LIDE+ QATEPECM+P+
Sbjct: 566 DEKKYKALVKMCEKEILSNADVICATCVGCGDPRLSKFKFRTVLIDEATQATEPECMIPL 625
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
++G KQ++LVGDH QLGPV+M KKAA+AGL QSLFERLVVLGI P RL VQYRMHP LS+
Sbjct: 626 VMGCKQVVLVGDHQQLGPVIMNKKAAKAGLQQSLFERLVVLGISPIRLTVQYRMHPCLSE 685
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEA 804
FPSN FYEG+LQNGV +ER +DFPWPV D PM+F+++ GQEEI+ SGTSY+NRTEA
Sbjct: 686 FPSNMFYEGTLQNGVSKNERLRKNVDFPWPVNDTPMMFHMSLGQEEISSSGTSYLNRTEA 745
Query: 805 SNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
SN EKI +F + G+K QIG+ITPYEGQR+++V MQ GSL +Y+EIEVASVDAFQ
Sbjct: 746 SNCEKIVVKFFKAGVKFSQIGIITPYEGQRSYIVSSMQQSGSLRKDLYKEIEVASVDAFQ 805
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
GREKD II+SCVRSN+HQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW +LL
Sbjct: 806 GREKDYIIVSCVRSNEHQGIGFLSDPRRLNVALTRAKYGVVILGNPKVLSKHPLWYHLLL 865
Query: 925 FYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
YKE+ LVEGPLNNL+ S+I F KPK ++
Sbjct: 866 HYKEKNCLVEGPLNNLQVSMIHFPKPKTDYR 896
>gi|350629790|gb|EHA18163.1| hypothetical protein ASPNIDRAFT_119246 [Aspergillus niger ATCC
1015]
Length = 1071
Score = 1125 bits (2909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/885 (60%), Positives = 659/885 (74%), Gaps = 69/885 (7%)
Query: 76 KLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHI 135
K H+ FEEE KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI
Sbjct: 49 KNHQGHFEEE---------KELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHI 99
Query: 136 INHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQ 195
+NHLVRA+HKEV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA
Sbjct: 100 VNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM 159
Query: 196 NSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEAT 255
S KDMNWD +W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N++AT
Sbjct: 160 PSSKDMNWDTSRWQPLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQAT 219
Query: 256 FQDLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 314
F DLEK VD++P VLLR YD
Sbjct: 220 FSDLEKATAVDDEPAPVLLR--------------------YD------------------ 241
Query: 315 GLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKK 374
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K
Sbjct: 242 -----------------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNK 284
Query: 375 SIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA 433
+A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++
Sbjct: 285 HLASFILPKLELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKG 344
Query: 434 ---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
PTE T F+VD++WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V +
Sbjct: 345 DHKSVPTECTHNFTVDYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMK 404
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
+PK FS P LP+LN SQ+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G
Sbjct: 405 TQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQ 464
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKK 610
VLVCAPSN+AVDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL K
Sbjct: 465 VLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRINDTNIELIK 524
Query: 611 LLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
L QLK E GELSS DEKR + L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LID
Sbjct: 525 LNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLID 584
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF 730
ES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P
Sbjct: 585 ESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPI 644
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE 790
RL VQYRMHP LS+FPSN FYEGSLQNG+ + ER +DFPWP+ D PM+F+ G EE
Sbjct: 645 RLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSNLGNEE 704
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
I+ SGTSY+NRTEA+NVEKI TRF + G++P+ IG+ITPYEGQR+++V MQ G+ +
Sbjct: 705 ISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGTFKKE 764
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
Y+EIEVASVDAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG+ ++GNP
Sbjct: 765 HYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNP 824
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
KVLSK PLWN LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 825 KVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYR 869
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/866 (61%), Positives = 647/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH
Sbjct: 80 KELPPHACAYCGIHNPSCVVRCLTCGKWFCSARGNTSSSHIVNHLVRARHKEVQLHPSSS 139
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 140 LGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 199
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG-VDEDPHQVLL 273
RSFLSWLV PT+QEQ R R ++ IAKLEE+WK+NA AT DLEK +D+DP VLL
Sbjct: 200 RSFLSWLVAQPTDQEQLRARHLSPQMIAKLEELWKENASATITDLEKAANIDDDPAPVLL 259
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 260 R--------------------YD-----------------------------------DA 264
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKESQ+Q+N+ VRWD+GLN K +A F L K + GD++L
Sbjct: 265 YQYQNVFGPLVKIEADYDRKLKESQSQDNLIVRWDLGLNNKHLASFVLPKLELGDVKLAV 324
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ D W G+G+VIKIP+N DEV +EL++ PTE T F+ D++W
Sbjct: 325 GDEMRLKYTGDLRPAWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVW 384
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FA+D+ SVS YI+HRLLGH V + LPK F+ P LPDLN SQ
Sbjct: 385 KATSFDRMQLAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFTVPGLPDLNSSQ 444
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 445 INAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLSKINGGQVLVCAPSNVAVDQLCERIH 504
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++S VSFL+LH Q+R + N EL KL QLK E GELSS DEK+Y
Sbjct: 505 RTGLKTVRVTAKSREDVESSVSFLSLHEQVRMNDSNVELAKLNQLKSELGELSSQDEKKY 564
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 565 KSLTRAAEREILTNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCK 624
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 625 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNM 684
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 685 FYEGSLQNGVTMQDRLRPDVDFPWPVADSPMMFWSNLGNEEISASGTSYLNRTEAANVEK 744
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+ P+ IGVITPYEGQR+F+V MQ G+ ++Y+EIEVASVDAFQGREKD
Sbjct: 745 IVTRFFKAGVHPQSIGVITPYEGQRSFIVSSMQTNGTFKKELYKEIEVASVDAFQGREKD 804
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL +KE+
Sbjct: 805 FIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKER 864
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL FS+PKQ ++
Sbjct: 865 NCLVEGPLSNLQISLHQFSRPKQSYR 890
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/872 (60%), Positives = 655/872 (75%), Gaps = 61/872 (6%)
Query: 85 EEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKH 144
++DD LP HAC YCGIHDPA V+ C +WFCN RG+TSGSHI+NHLVRA+
Sbjct: 1 DDDDDEALVLSNLPAHACSYCGIHDPASVVKCLDTNRWFCNSRGNTSGSHIVNHLVRARS 60
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
V LHKDGPLGETVLECY CG RN+F LGFIPAKADSVVVLLCR PCA+ ++ KD NWD
Sbjct: 61 HAVMLHKDGPLGETVLECYNCGSRNVFSLGFIPAKADSVVVLLCRQPCASSSAAKDSNWD 120
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
QW+P+I+DR FL WLVKVP+ +Q R RQ+T+ QI KLE++W+DN +AT DLEKPGV
Sbjct: 121 VAQWQPIISDRCFLPWLVKVPSHNDQMRARQITAEQIQKLEDLWRDNPDATLDDLEKPGV 180
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
DE+ +VLL QY+
Sbjct: 181 DEEVQEVLL------QYE------------------------------------------ 192
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL--- 381
D Y YQNIFGPLVKLEA+YD+R+KESQT + + VRWD+GLNKK A+F+L
Sbjct: 193 -------DAYHYQNIFGPLVKLEAEYDRRMKESQTCDGIAVRWDMGLNKKHTAFFTLPSL 245
Query: 382 --AKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEA 439
+ D+++M GDEL+L+Y+ + S+ W G G V KI DN +E LEL++ PT+
Sbjct: 246 RVSHFRQDLKVMVGDELRLKYAGELSRPWQGEGRVTKIADNHSEEYALELRNK-DVPTQC 304
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
T F V+FIWKS +FDRMQ A++ FAVD++SVSA+IYH+LLGH ++ L + +PK FS
Sbjct: 305 TQNFMVEFIWKSITFDRMQNAMKTFAVDERSVSAHIYHQLLGHQIEPALIKVTMPKRFSV 364
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
LP+LN SQ+ A++ +QRPLSLIQGPPGTGKTVTSA++VY LV+Q VLVCAPSNI
Sbjct: 365 KGLPELNHSQIEAIRAVLQRPLSLIQGPPGTGKTVTSASLVYHLVQQKHGKVLVCAPSNI 424
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVDQLTEKIHRTG+KV+RVCAKSRE D+ VSFL+LHNQ+R M+ + E +KLL+LK+ G
Sbjct: 425 AVDQLTEKIHRTGVKVLRVCAKSREEADTRVSFLSLHNQVRTMKGHPEYQKLLKLKDAVG 484
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS ADEKR+R L++ E+ LL +ADVICCTC AGD R+ F ++LIDE+ Q+TEPE
Sbjct: 485 ELSEADEKRFRTLQRIIEQELLRSADVICCTCAAAGDRRVSGQTFRTVLIDEATQSTEPE 544
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
CM+P++LG +Q ++VGDHCQLGPVVMCKKAA AGLSQSLFER V+LGIRP RL+VQYRMH
Sbjct: 545 CMLPLVLGTRQCVMVGDHCQLGPVVMCKKAASAGLSQSLFERCVLLGIRPVRLQVQYRMH 604
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV A ER + +DFPWPVP+ PM+FY + GQEEI+ SGTSY+
Sbjct: 605 PCLSEFPSNTFYEGSLQNGVTASERLMPAVDFPWPVPETPMMFYASMGQEEISASGTSYL 664
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NRTEA+NVEK+ TRF++ G+ PEQIG++TPYEGQRA++VQ+M + G+L +Y+ +EVAS
Sbjct: 665 NRTEAANVEKMVTRFLKSGVTPEQIGIVTPYEGQRAYIVQYMSFNGTLRQPLYEAVEVAS 724
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SC RSN+HQGIGFLNDPRRLNVALTRAKYGII++GNPKVLSKQ LW
Sbjct: 725 VDAFQGREKDYIILSCTRSNEHQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQALW 784
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
NNLL YKE LVEGPL+NLK ++ FS+P+
Sbjct: 785 NNLLVHYKENGCLVEGPLSNLKPCMMQFSRPR 816
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/952 (58%), Positives = 686/952 (72%), Gaps = 76/952 (7%)
Query: 24 IGGDTQGS--EFDFTDFTL------PSQSQTQASQLDSVNQIQVNGKQNLDNSNLNLVSQ 75
+ GD Q + + +F + +L PS+++ QA+ S Q + + S+ +Q
Sbjct: 43 VEGDGQSTIDDINFDELSLLDANPEPSRNRHQANNNSSNYDHQSHSDSATEQSSK--FNQ 100
Query: 76 KLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRG----HTS 131
+E FE+ DD N+ELP HAC YCGIH P+ V+ C IC KWFCN RG H++
Sbjct: 101 AENEADFEDVLDD----LNRELPNHACAYCGIHSPSSVVKCLICSKWFCNSRGGPGAHST 156
Query: 132 GSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTP 191
GSHI+NHLVRAKHKEVTLH+DGPLGET ECY CG +N+F LGFIPAK+D+VVVLLCR P
Sbjct: 157 GSHIVNHLVRAKHKEVTLHEDGPLGETTPECYNCGSKNVFTLGFIPAKSDTVVVLLCRQP 216
Query: 192 CAAQNSLK-DMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKD 250
CA+ S K D+ WD QW PLI DR FLSWLVKVP EQE R + V +I +LEE+WK+
Sbjct: 217 CASTPSSKSDLVWDTSQWSPLIEDRQFLSWLVKVPDEQEVVRSKPVGFREITRLEEMWKE 276
Query: 251 NAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTV 310
NA AT DLE+ G L E + Q + +
Sbjct: 277 NATATLDDLERDGA----------------------------------LGEGEPQP-ILL 301
Query: 311 RWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVG 370
R++ D YQYQNIFGPLVK+E+DYD++LKES TQ +VTVRWD+G
Sbjct: 302 RYE------------------DAYQYQNIFGPLVKIESDYDRKLKESLTQNDVTVRWDMG 343
Query: 371 LNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLEL 429
LN+K IAYF L K + G++RL GDEL+L+Y+ + K W G GHVIK+P+N DEV LEL
Sbjct: 344 LNQKRIAYFYLPKLESGEVRLAVGDELRLKYAGELQKAWEGPGHVIKVPNNQSDEVALEL 403
Query: 430 KSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN--VDEV 487
+ + G P E T FSVDF+WKSTSFDRMQ+A++ FAVDDQSVS YIY +LLGH V +V
Sbjct: 404 RRNDGVPHELTVNFSVDFVWKSTSFDRMQMAMKTFAVDDQSVSGYIYRKLLGHETPVPQV 463
Query: 488 LFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
L R +PK SAPNLP+LN SQV AVK +Q+PLSL+QGPPGTGKTVTSA++VY L K
Sbjct: 464 L-RTQMPKRVSAPNLPELNHSQVSAVKSVLQKPLSLVQGPPGTGKTVTSASVVYHLSKMN 522
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCAPSN+AVDQLTEKIH TGLKVVRV AKSREAIDS V +L LH Q+ N + + +
Sbjct: 523 PGQVLVCAPSNVAVDQLTEKIHLTGLKVVRVQAKSREAIDSSVQYLTLHQQVANNDTHPD 582
Query: 608 LKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSI 667
L+KL+QLK E GELSS DE+RY+ L + E+ +L NADVI CTCVGAGDPRL K+KF ++
Sbjct: 583 LQKLIQLKAEQGELSSTDERRYKSLTRLCEREILTNADVILCTCVGAGDPRLAKMKFRTV 642
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
LIDE+ QATEPECM+P+ LG KQ++ VGDH QLGP +M KKAARAGL+QS+FERLV+LG
Sbjct: 643 LIDEATQATEPECMIPLTLGVKQVVFVGDHQQLGPTIMNKKAARAGLTQSMFERLVLLGN 702
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG 787
RP RL+VQYRMHP LS+FPSN FYEGSLQNGV A ER +DFPWP P PM F+ G
Sbjct: 703 RPIRLQVQYRMHPCLSEFPSNMFYEGSLQNGVTAPERIKKNVDFPWPQPTTPMCFHCNLG 762
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
QEEI+ SGTS++NRTEASNVEK+ TRF + G+ P QIG++TPYEGQR+++V +MQ G+L
Sbjct: 763 QEEISSSGTSFLNRTEASNVEKVVTRFFKAGVLPSQIGIVTPYEGQRSYIVTYMQTNGTL 822
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
+Y++IEVASVDAFQGREKD II+SCVRSNDHQGIGFLNDPRRLNVALTRAKYG++V+
Sbjct: 823 KKDLYKDIEVASVDAFQGREKDYIILSCVRSNDHQGIGFLNDPRRLNVALTRAKYGVVVL 882
Query: 908 GNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
GNPKVLSK LW+ LL YKE+ LVEGPLNNL+ SL+ SKP++ + ++
Sbjct: 883 GNPKVLSKHALWHFLLTAYKEKSCLVEGPLNNLQASLVQLSKPRKPLDRADL 934
>gi|145240145|ref|XP_001392719.1| regulator of nonsense transcripts 1 [Aspergillus niger CBS 513.88]
gi|134077233|emb|CAK45574.1| unnamed protein product [Aspergillus niger]
Length = 1072
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/885 (60%), Positives = 658/885 (74%), Gaps = 69/885 (7%)
Query: 76 KLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHI 135
K H+ FEEE KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI
Sbjct: 49 KNHQGHFEEE---------KELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHI 99
Query: 136 INHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQ 195
+NHLVRA+HKEV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA
Sbjct: 100 VNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM 159
Query: 196 NSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEAT 255
S KDMNWD +W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N++AT
Sbjct: 160 PSSKDMNWDTSRWQPLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQAT 219
Query: 256 FQDLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 314
F DLEK VD++P VLLR YD
Sbjct: 220 FSDLEKATAVDDEPAPVLLR--------------------YD------------------ 241
Query: 315 GLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKK 374
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K
Sbjct: 242 -----------------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNK 284
Query: 375 SIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA 433
+A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++
Sbjct: 285 HLASFILPKLELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKG 344
Query: 434 ---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
PTE T F+ D++WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V +
Sbjct: 345 DHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMK 404
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
+PK FS P LP+LN SQ+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G
Sbjct: 405 TQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQ 464
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKK 610
VLVCAPSN+AVDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL K
Sbjct: 465 VLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRINDTNIELIK 524
Query: 611 LLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
L QLK E GELSS DEKR + L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LID
Sbjct: 525 LNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLID 584
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF 730
ES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P
Sbjct: 585 ESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPI 644
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE 790
RL VQYRMHP LS+FPSN FYEGSLQNG+ + ER +DFPWP+ D PM+F+ G EE
Sbjct: 645 RLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSNLGNEE 704
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
I+ SGTSY+NRTEA+NVEKI TRF + G++P+ IG+ITPYEGQR+++V MQ G+ +
Sbjct: 705 ISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGTFKKE 764
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
Y+EIEVASVDAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG+ ++GNP
Sbjct: 765 HYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNP 824
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
KVLSK PLWN LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 825 KVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYR 869
>gi|358371937|dbj|GAA88543.1| regulator of nonsense transcripts [Aspergillus kawachii IFO 4308]
Length = 1072
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/885 (60%), Positives = 658/885 (74%), Gaps = 69/885 (7%)
Query: 76 KLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHI 135
K H+ FEEE KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI
Sbjct: 49 KHHQGHFEEE---------KELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHI 99
Query: 136 INHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQ 195
+NHLVRA+HKEV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA
Sbjct: 100 VNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAM 159
Query: 196 NSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEAT 255
S KDMNWD +W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N++AT
Sbjct: 160 PSSKDMNWDTSRWQPLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQAT 219
Query: 256 FQDLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 314
F DLEK VD++P VLLR YD
Sbjct: 220 FSDLEKATAVDDEPAPVLLR--------------------YD------------------ 241
Query: 315 GLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKK 374
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K
Sbjct: 242 -----------------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNK 284
Query: 375 SIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA 433
+A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++
Sbjct: 285 HLASFILPKLELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKG 344
Query: 434 ---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
PTE T F+ D++WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V +
Sbjct: 345 DHKSVPTECTHNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMK 404
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
+PK FS P LP+LN SQ+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G
Sbjct: 405 TQMPKKFSVPGLPELNGSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQ 464
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKK 610
VLVCAPSN+AVDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL K
Sbjct: 465 VLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRINDTNIELIK 524
Query: 611 LLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
L QLK E GELSS DEKR + L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LID
Sbjct: 525 LNQLKAELGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLID 584
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF 730
ES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P
Sbjct: 585 ESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPI 644
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE 790
RL VQYRMHP LS+FPSN FYEGSLQNG+ + ER +DFPWP+ D PM+F+ G EE
Sbjct: 645 RLNVQYRMHPCLSEFPSNMFYEGSLQNGISSFERLRRDVDFPWPIADNPMMFWSNLGNEE 704
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
I+ SGTSY+NRTEA+NVEKI TRF + G++P+ IG+ITPYEGQR+++V MQ G+ +
Sbjct: 705 ISASGTSYLNRTEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGTFKKE 764
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
Y+EIEVASVDAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG+ ++GNP
Sbjct: 765 HYKEIEVASVDAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNP 824
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
KVLSK PLWN LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 825 KVLSKHPLWNCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYR 869
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/875 (61%), Positives = 656/875 (74%), Gaps = 60/875 (6%)
Query: 86 EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHK 145
+++GN KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HK
Sbjct: 57 QNEGNLEEEKELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHK 116
Query: 146 EVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQ 205
EV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD
Sbjct: 117 EVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDT 176
Query: 206 EQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GV 264
+W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N++ATF DLEK V
Sbjct: 177 SRWQPLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFADLEKATAV 236
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P VLLR YD
Sbjct: 237 DDEPAPVLLR--------------------YD---------------------------- 248
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K
Sbjct: 249 -------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKL 301
Query: 385 D-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEAT 440
+ GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T
Sbjct: 302 ELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 361
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F+ D++WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + LPK FS P
Sbjct: 362 HNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSVP 421
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+ AVK +QRP+SLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+A
Sbjct: 422 GLPELNGSQINAVKSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVA 481
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GE
Sbjct: 482 VDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKAELGE 541
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DEKR + L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPEC
Sbjct: 542 LSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPEC 601
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP
Sbjct: 602 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHP 661
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEGSLQNGV A +R +DFPWPV D PM+F+ G EEI+ SGTSY+N
Sbjct: 662 CLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSNLGNEEISASGTSYLN 721
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKI TRF + G++P IG+ITPYEGQR+++V MQ G+ + Y+EIEVASV
Sbjct: 722 RTEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASV 781
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN
Sbjct: 782 DAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWN 841
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 842 CLLQHFKERHCLVEGPLSNLQESLIQFSRPKQSYR 876
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/875 (61%), Positives = 656/875 (74%), Gaps = 60/875 (6%)
Query: 86 EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHK 145
+++GN KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HK
Sbjct: 57 QNEGNLEEEKELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHK 116
Query: 146 EVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQ 205
EV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD
Sbjct: 117 EVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDT 176
Query: 206 EQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GV 264
+W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N++ATF DLEK V
Sbjct: 177 SRWQPLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFADLEKATAV 236
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P VLLR YD
Sbjct: 237 DDEPAPVLLR--------------------YD---------------------------- 248
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K
Sbjct: 249 -------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKL 301
Query: 385 D-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEAT 440
+ GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T
Sbjct: 302 ELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 361
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F+ D++WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + LPK FS P
Sbjct: 362 HNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSVP 421
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+ AVK +QRP+SLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+A
Sbjct: 422 GLPELNGSQINAVKSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVA 481
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GE
Sbjct: 482 VDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKAELGE 541
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DEKR + L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPEC
Sbjct: 542 LSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPEC 601
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP
Sbjct: 602 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHP 661
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEGSLQNGV A +R +DFPWPV D PM+F+ G EEI+ SGTSY+N
Sbjct: 662 CLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSNLGNEEISASGTSYLN 721
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKI TRF + G++P IG+ITPYEGQR+++V MQ G+ + Y+EIEVASV
Sbjct: 722 RTEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASV 781
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN
Sbjct: 782 DAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWN 841
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 842 CLLQHFKERHCLVEGPLSNLQESLIQFSRPKQSYR 876
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/875 (61%), Positives = 656/875 (74%), Gaps = 60/875 (6%)
Query: 86 EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHK 145
+++GN KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HK
Sbjct: 38 QNEGNLEEEKELPPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHK 97
Query: 146 EVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQ 205
EV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD
Sbjct: 98 EVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDT 157
Query: 206 EQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GV 264
+W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N++ATF DLEK V
Sbjct: 158 SRWQPLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFADLEKATAV 217
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P VLLR YD
Sbjct: 218 DDEPAPVLLR--------------------YD---------------------------- 229
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K
Sbjct: 230 -------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKL 282
Query: 385 D-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEAT 440
+ GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T
Sbjct: 283 ELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 342
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F+ D++WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + LPK FS P
Sbjct: 343 HNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSVP 402
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+ AVK +QRP+SLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+A
Sbjct: 403 GLPELNGSQINAVKSVLQRPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVA 462
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GE
Sbjct: 463 VDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKAELGE 522
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DEKR + L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPEC
Sbjct: 523 LSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPEC 582
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP
Sbjct: 583 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHP 642
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEGSLQNGV A +R +DFPWPV D PM+F+ G EEI+ SGTSY+N
Sbjct: 643 CLSEFPSNMFYEGSLQNGVSAFDRLRRDVDFPWPVVDSPMMFWSNLGNEEISASGTSYLN 702
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKI TRF + G++P IG+ITPYEGQR+++V MQ G+ + Y+EIEVASV
Sbjct: 703 RTEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASV 762
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN
Sbjct: 763 DAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWN 822
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 823 CLLQHFKERHCLVEGPLSNLQESLIQFSRPKQSYR 857
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 1120 bits (2898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/875 (60%), Positives = 655/875 (74%), Gaps = 60/875 (6%)
Query: 86 EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHK 145
++ GN KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HK
Sbjct: 50 KNQGNLEEEKELPPHACAYCGIHNPSSVVKCLSCSKWFCSARGNTSSSHIVNHLVRARHK 109
Query: 146 EVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQ 205
EV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD
Sbjct: 110 EVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDT 169
Query: 206 EQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GV 264
+W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N++ATF DLEK V
Sbjct: 170 SRWQPLIEDRSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFSDLEKATAV 229
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P VLLR YD
Sbjct: 230 DDEPAPVLLR--------------------YD---------------------------- 241
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K
Sbjct: 242 -------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKL 294
Query: 385 D-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEAT 440
+ GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T
Sbjct: 295 ELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKAVPTECT 354
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F+ D++WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS P
Sbjct: 355 HNFTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVP 414
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+A
Sbjct: 415 GLPELNGSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVA 474
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GE
Sbjct: 475 VDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELMKLNQLKSELGE 534
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DEKR + L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPEC
Sbjct: 535 LSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPEC 594
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP
Sbjct: 595 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHP 654
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEGSLQNG+ + ER +DFPWP+ D PM+F+ G EEI+ SGTSY+N
Sbjct: 655 CLSEFPSNMFYEGSLQNGISSIERLRRDVDFPWPIMDNPMMFWSNLGNEEISASGTSYLN 714
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKI TRF + G++P+ IG+ITPYEGQR+++V MQ G+ + Y+EIEVASV
Sbjct: 715 RTEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVASV 774
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG+ ++GNPKVLSK PLWN
Sbjct: 775 DAFQGREKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWN 834
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 835 CLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYR 869
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 1120 bits (2898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/895 (60%), Positives = 665/895 (74%), Gaps = 67/895 (7%)
Query: 68 SNLNLVSQKLHELQFEEEED-DGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFC 124
S + ++ + EL FE+ D D ++ + LP HACKYCGIH+PA ++ CN+ C+KWFC
Sbjct: 362 SGVAGLTSGISELNFEDPGDEDSLDYSKRHLPEHACKYCGIHNPACIMRCNVPTCRKWFC 421
Query: 125 NGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV 184
N RG+TSGSHI+NHLVR+KHKEV LH+D PLGET+LECY CG RN+F+LGFIPAK++SVV
Sbjct: 422 NSRGNTSGSHIVNHLVRSKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFIPAKSESVV 481
Query: 185 VLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
VLLCR PC + N LKDMNWD QW PLI DR FL WLVKVP+EQEQ R RQ+++ QI K+
Sbjct: 482 VLLCREPCLSVNGLKDMNWDLSQWLPLINDRCFLDWLVKVPSEQEQLRARQISAQQINKV 541
Query: 245 EEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQT 304
EE+WK N +AT +DLEKPGVD++P V L+YED YQYQN+FGPLVKLEADYDK +KESQ+
Sbjct: 542 EELWKTNPDATLEDLEKPGVDDEPQPVALKYEDAYQYQNVFGPLVKLEADYDKMMKESQS 601
Query: 305 QENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV- 363
++N+TVRWDVGLNKK IAYF K D + + + G ++L D Q+ +V
Sbjct: 602 KDNITVRWDVGLNKKRIAYFVFPKEDNE---LRLVPGDELRLRYPGDGTHSGWQSVGHVI 658
Query: 364 --TVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNF 421
T + +V L ++R QG + + +++ W
Sbjct: 659 KLTAQEEVAL---------------ELRANQGVPIDVNHNFSVDFVW------------- 690
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
KSTSFDRMQ+A++ FAVD+ SVS YIYHRLLG
Sbjct: 691 ----------------------------KSTSFDRMQVAMKTFAVDETSVSGYIYHRLLG 722
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVY 541
H V+ R LP+ F AP LP+LN SQVYAVK +Q+P+SLIQGPPGTGKTVTSA IVY
Sbjct: 723 HEVEMQTVRNTLPRRFGAPGLPELNASQVYAVKSVLQKPVSLIQGPPGTGKTVTSAAIVY 782
Query: 542 QLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN 601
L KQ VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+
Sbjct: 783 HLAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRH 842
Query: 602 MEMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
++ SEL KL LK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGAGDPRL
Sbjct: 843 LDTTDKSELHKLQLLKDELGELSSSDEKKYKSLKRATEREISQSADVICCTCVGAGDPRL 902
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+F +L+DES QATEPEC++P++LGAKQL+LVGDHCQLGPV+MCKKAARAGL+QSLF
Sbjct: 903 ANFRFRQVLVDESTQATEPECLIPLVLGAKQLVLVGDHCQLGPVIMCKKAARAGLAQSLF 962
Query: 720 ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
ERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +R LS+IDFPWPVP++P
Sbjct: 963 ERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTTSDRLLSQIDFPWPVPNRP 1022
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
M FYV GQEEI+ SGTSY+NR EA NVEKI T F++ G+ P QIGVITPYEGQRA++V
Sbjct: 1023 MFFYVQMGQEEISASGTSYLNRGEAGNVEKIVTTFLKSGVVPAQIGVITPYEGQRAYIVN 1082
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
+M GSL ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTR
Sbjct: 1083 NMARNGSLRQQLYKEIEVASVDSFQGREKDFIIVSCVRSNEHQGIGFLNDPRRLNVALTR 1142
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYF 954
A++GI+++GNPKVLSKQPLWN LL YKE +VLVEG LNNLK+S++ F KPK+ +
Sbjct: 1143 ARFGIVILGNPKVLSKQPLWNTLLTHYKEHEVLVEGSLNNLKQSMVQFQKPKKVY 1197
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 1120 bits (2897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/917 (58%), Positives = 665/917 (72%), Gaps = 66/917 (7%)
Query: 41 PSQSQTQASQLDSVNQIQVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPH 100
PS+S A L + V N ++ L+ L E +E D + LP H
Sbjct: 74 PSRSHLHA-HLAPHTKADVPSASNHSHTALHADLASLSEAGISDEADPA---LLENLPEH 129
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
AC YCGI +PA V+ C C KWFCN RG TSGSHI+NHLVRAKHKEV LH + PLGET
Sbjct: 130 ACAYCGIFNPACVVKCLTCNKWFCNSRGSTSGSHIVNHLVRAKHKEVCLHAESPLGETTP 189
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
ECY CG +N+F+LGFIPAK+++VVVLLCR PCAA ++ KD+ WD QW PLI DR FL+W
Sbjct: 190 ECYNCGAKNVFLLGFIPAKSETVVVLLCRQPCAAMSNSKDIIWDTTQWSPLIEDRCFLTW 249
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
LVKVP+E EQ R R VT QI +LEE+WKDNA A+ DL+KPGV+E+P
Sbjct: 250 LVKVPSEHEQLRARPVTLQQINRLEELWKDNASASLDDLDKPGVEEEP------------ 297
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIF 340
++V +R++ D YQYQNIF
Sbjct: 298 -------------------------DSVLLRYE------------------DAYQYQNIF 314
Query: 341 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLR 399
GPLVK+EADYD++LKESQTQ+++ +RWD GLN+K IA+ L K + G++RL GDELKLR
Sbjct: 315 GPLVKMEADYDRKLKESQTQQDLVIRWDQGLNQKKIAWMMLPKLESGEVRLAVGDELKLR 374
Query: 400 YSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQL 459
Y + + W G+GHVIKIP++ DEV LEL + G P T F DF+WK+TSFDRMQ
Sbjct: 375 YRGEMAPPWEGVGHVIKIPNHVSDEVALELNRADGVPDHCTHNFFADFVWKATSFDRMQN 434
Query: 460 ALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR 519
A++ FAVD+QS+SAYIYH+LLGH +D R +PK FSAP LP+LN SQV AVK +Q+
Sbjct: 435 AMKTFAVDEQSLSAYIYHKLLGHEIDNATLRTTMPKRFSAPGLPELNHSQVNAVKSVLQK 494
Query: 520 PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC 579
PLSLIQGPPGTGKTVTSATIVYQL K PVLVCAPSN+AVDQLTEKIH TGLKVVR+
Sbjct: 495 PLSLIQGPPGTGKTVTSATIVYQLSKMNPGPVLVCAPSNVAVDQLTEKIHLTGLKVVRLT 554
Query: 580 AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
AKSREA+D P+SFL LH Q+ N + N EL+KL+QLK E GELSS+DE++Y+ L + EK
Sbjct: 555 AKSREALDGPISFLTLHEQVANNDTNIELQKLIQLKNEQGELSSSDERKYKALTRACEKE 614
Query: 640 LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
+L ADVICCTCVG GDPRL KIKF ++L+DE+ QA EPECM+P++ + VGDH Q
Sbjct: 615 ILSTADVICCTCVGCGDPRLSKIKFRTVLVDEATQAAEPECMIPLV------VFVGDHLQ 668
Query: 700 LGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGV 759
LGPV+M KK ARAG SQSLFERL++LG RP RL+VQYRMHP LS+FPSN FYEG+LQNGV
Sbjct: 669 LGPVIMNKKVARAGASQSLFERLIMLGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGV 728
Query: 760 CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGM 819
A ER +DFPWPVP PMLF+ GQEEI+ SGTS++NRTEA+NVEKI TRF + G+
Sbjct: 729 TAPERLRKDVDFPWPVPSLPMLFFQNLGQEEISSSGTSFLNRTEAANVEKIVTRFFKAGV 788
Query: 820 KPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN 879
KP QIG++TPYEGQR+++V HMQ GSL ++Y+++EVASVDAFQGREKD II+SCVRSN
Sbjct: 789 KPSQIGIVTPYEGQRSYIVNHMQLHGSLKKELYKDVEVASVDAFQGREKDYIILSCVRSN 848
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN 939
+HQGIGFL+DPRRLNVALTRA++G++++GNPKVL+K PLW+ LL YKE+ LVEG L+N
Sbjct: 849 EHQGIGFLSDPRRLNVALTRARFGLVILGNPKVLNKHPLWHYLLVHYKEKGCLVEGVLSN 908
Query: 940 LKESLILFSKPKQYFKK 956
L+ S++ F KP++ +K
Sbjct: 909 LQPSMMQFPKPRRPLQK 925
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae
3.042]
Length = 1072
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/866 (61%), Positives = 650/866 (75%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH
Sbjct: 59 KELPPHACAYCGIHNPSSVVKCLSCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASS 118
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 119 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 178
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WK+N++ATF DLEK VD++P VLL
Sbjct: 179 RSFLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFSDLEKATAVDDEPAPVLL 238
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 239 R--------------------YD-----------------------------------DA 243
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
+QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 244 FQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAV 303
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T F+ D++W
Sbjct: 304 GDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVW 363
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
KSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS P LP+LN SQ
Sbjct: 364 KSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQ 423
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 424 INAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIH 483
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GELSS DEKR
Sbjct: 484 RTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELLKLNQLKAELGELSSQDEKRL 543
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L ++AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 544 KQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCK 603
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 604 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNM 663
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNG+ + ER +DFPWP+ D PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 664 FYEGSLQNGISSIERLRRDVDFPWPISDNPMMFWSNLGNEEISASGTSYLNRTEATNVEK 723
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G++P IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 724 IVTRFFKAGVQPGDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKD 783
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG+ ++GNPKVLSK PLWN LL +KE+
Sbjct: 784 FIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHFKER 843
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 844 HCLVEGPLSNLQESLIQFSRPKQAYR 869
>gi|258570655|ref|XP_002544131.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
gi|237904401|gb|EEP78802.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
Length = 1075
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/867 (60%), Positives = 648/867 (74%), Gaps = 60/867 (6%)
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
+++LPPHAC YCGIH+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH
Sbjct: 62 DRQLPPHACCYCGIHNTNSVVKCLACNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPAS 121
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
G+TVLECY CG RN+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD W+PLI
Sbjct: 122 AAGDTVLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSLWQPLIE 181
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVL 272
DRSFLSWLV P++QEQ R R ++ IAKLEE+WK+N+ AT +DLEK GVD++P VL
Sbjct: 182 DRSFLSWLVGTPSDQEQLRARHLSPQMIAKLEEIWKENSSATVEDLEKATGVDDEPAPVL 241
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
LR YD D
Sbjct: 242 LR--------------------YD-----------------------------------D 246
Query: 333 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLM 391
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + V+WD+GLN K +A F L K + GD++L
Sbjct: 247 AYQYQNVFGPLVKIEADYDRKLKEAQSQDGLIVKWDLGLNNKHLASFVLPKLELGDVKLA 306
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFI 448
GDE++++YS + + W G+G+V+KIP+N DEV +EL++ PTE T F+ D++
Sbjct: 307 VGDEMRIKYSGELRQKWEGVGYVVKIPNNQSDEVTIELRTKGDHKSVPTECTHNFTADYV 366
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 508
WKSTSFDRMQ A++ FAVD+ SVS YI+HRLLG V + LPK F+AP LP LN S
Sbjct: 367 WKSTSFDRMQTAMKTFAVDEMSVSGYIFHRLLGSEVAAAPMKTQLPKKFTAPGLPGLNPS 426
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
QV AVK +Q+PLSLIQGPPGTGKTVTSAT++Y L K TG VLVCAPSN+AVDQL E I
Sbjct: 427 QVNAVKAVLQKPLSLIQGPPGTGKTVTSATVIYHLAKLTGGQVLVCAPSNVAVDQLCECI 486
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR 628
HRTGLK VRV AKSRE ++SPV L+LH Q+RN + N EL KL QLK E GELSS DEK+
Sbjct: 487 HRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNVELMKLTQLKNELGELSSQDEKK 546
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
++ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q++EPECM+P+++G
Sbjct: 547 FKQLTRAAEKEILTNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMIPLVMGC 606
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS FPSN
Sbjct: 607 KQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSSFPSN 666
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FY+GSLQNGV +D+R L +DFPWP+ DKPM+F+ G EEI+ SGTSY+NRTEA+NVE
Sbjct: 667 MFYDGSLQNGVTSDDRLLKDVDFPWPISDKPMMFWSNLGNEEISASGTSYLNRTEAANVE 726
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
KI TRF + G+KP IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREK
Sbjct: 727 KIVTRFFKAGVKPSAIGIITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDAFQGREK 786
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE
Sbjct: 787 DFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKE 846
Query: 929 QKVLVEGPLNNLKESLILFSKPKQYFK 955
Q LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 847 QDCLVEGPLSNLQTSLVQFSRPKQAYR 873
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium
dendrobatidis JAM81]
Length = 1119
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/976 (55%), Positives = 686/976 (70%), Gaps = 105/976 (10%)
Query: 27 DTQGSEFDFTDFTLPSQ------------SQTQASQLDSVNQI----------------- 57
DTQGS++D+ D+ + SQ Q ++ +DS++ I
Sbjct: 14 DTQGSQYDYDDYVVASQLSLPPTTTSNINGQMTSTGMDSLHDISQDYPLSLSSQSNHHGL 73
Query: 58 ----------QVNGKQNLD--------NSNLNLVSQKLHELQFEEEEDDGNEFFNKELPP 99
NG N+D + + +L + E E++ D +E ELP
Sbjct: 74 VHPHSHGHAKHPNGT-NIDTEISLGFYDPDFDLADDSVLEFNHPEQDQDQSET-AAELPS 131
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGIH+ + V+ C C KWFCN RG ++GSHIINHLVRA+HKEV+LH + LG+T+
Sbjct: 132 HACSYCGIHNVSTVVRCLTCSKWFCNARGQSNGSHIINHLVRARHKEVSLHSESALGDTI 191
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG RNIF+LGFIPAK+D+VVVLLCR PCA+ S KD NWD QW PLI DRS LS
Sbjct: 192 LECYNCGCRNIFLLGFIPAKSDTVVVLLCRQPCASTPSNKDANWDLAQWMPLIEDRSLLS 251
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+VKVP+EQEQ R R +T Q+ KLE+VWK NA AT DL++PGVD+DP VLL+
Sbjct: 252 WIVKVPSEQEQVRARHITGQQMVKLEDVWKYNALATVADLDRPGVDDDPLSVLLK----- 306
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
YD D YQYQNI
Sbjct: 307 ---------------YD-----------------------------------DAYQYQNI 316
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKL 398
FGPLVK+EAD D+R+KESQTQE+V VRWD+GLN K IA F L K + GD+RL GDEL L
Sbjct: 317 FGPLVKMEADDDRRMKESQTQEDVVVRWDMGLNMKRIANFPLPKLELGDIRLAVGDELLL 376
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
+Y + W G GHVIKIP+N DEV +ELK AP E T F+VDF+WKSTSFDRMQ
Sbjct: 377 KYHGELHAKWEGAGHVIKIPNNISDEVSMELKHDDRAPVECTHNFTVDFVWKSTSFDRMQ 436
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
A++ FA+D+ SVSAYIYHRLLGH+VD + + LPK +APNLP+LN SQ AVK +
Sbjct: 437 NAMKTFALDENSVSAYIYHRLLGHDVDPQVLKVTLPKRINAPNLPELNHSQATAVKSVLS 496
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
+PLSLIQGPPGTGKTVTSATIVY L VLVCAPSN+AVD LT KIH+TGLKVVRV
Sbjct: 497 KPLSLIQGPPGTGKTVTSATIVYHLANMNKGQVLVCAPSNVAVDHLTSKIHKTGLKVVRV 556
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
AKSREA++S VSFL+L Q++N++ + +L+KL++LK E GELSS DEK+Y+ L + AE+
Sbjct: 557 TAKSREALESSVSFLSLSEQVKNLDTDRQLQKLIRLKNELGELSSQDEKKYKYLFRKAER 616
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
+L++ADVIC TC+GAGD RL K F S+L+DE+ QA EPEC++P++LG+KQ++LVGDH
Sbjct: 617 EILEHADVICTTCMGAGDSRLSKFSFRSVLVDEATQACEPECLIPLVLGSKQVVLVGDHQ 676
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPVV KKA++AGLSQSLFERL++LG+RP RL+VQYRMHP LS+FPSN FYEGSLQNG
Sbjct: 677 QLGPVVQHKKASKAGLSQSLFERLIILGLRPIRLQVQYRMHPCLSEFPSNMFYEGSLQNG 736
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V ER +IDFPWPV + PM+FY + GQEEIA SG SY+NRTEA+ VEK+ T+F++ G
Sbjct: 737 VTVQERIRPEIDFPWPVHETPMIFYGSFGQEEIAASGKSYLNRTEAAYVEKVVTKFLKAG 796
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+ P QIG++TPYEGQRA++VQHMQ+ GSL ++Y+EIEVASVD+FQGREKD II++CVRS
Sbjct: 797 VTPAQIGIVTPYEGQRAYVVQHMQFNGSLKKELYKEIEVASVDSFQGREKDYIIVTCVRS 856
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N++QGIGFL DPRRLNVALTRAKYG++++GNPKVL+K PLW LL ++E LVEG L+
Sbjct: 857 NENQGIGFLVDPRRLNVALTRAKYGLVIVGNPKVLAKHPLWYQLLMTFREHSCLVEGHLH 916
Query: 939 NLKESLILFSKPKQYF 954
NLK + F KP++ +
Sbjct: 917 NLKPLMTQFQKPRRGY 932
>gi|303320095|ref|XP_003070047.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109733|gb|EER27902.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320031876|gb|EFW13833.1| ATP-dependent helicase NAM7 [Coccidioides posadasii str. Silveira]
gi|392865836|gb|EAS31677.2| ATP-dependent helicase NAM7 [Coccidioides immitis RS]
Length = 1101
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/866 (60%), Positives = 648/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELPPHAC YCGIH+ + V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 89 KELPPHACCYCGIHNTSSVVKCLACNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESA 148
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LGETVLECY CG RN+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD W+PLI D
Sbjct: 149 LGETVLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSLWQPLIED 208
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WK+N+ AT +DLEK GVD++P VLL
Sbjct: 209 RSFLPWLVASPSDQEQLRARHLSPQMIAKLEEMWKENSSATVEDLEKATGVDDEPAPVLL 268
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 269 R--------------------YD-----------------------------------DA 273
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + V+WD+GLN K +A F L K + GD++L
Sbjct: 274 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLIVKWDLGLNNKHLASFVLPKLELGDVKLAV 333
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+YS + W G+G+VIKIP+N DEV +EL++ PTE T F+ D++W
Sbjct: 334 GDEMRLKYSGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVW 393
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
KSTSFDRMQ A++ FAVD+ SVS YI+HRLLG+ V + LPK F+AP LP LN SQ
Sbjct: 394 KSTSFDRMQSAMKTFAVDELSVSNYIFHRLLGNEVAAGPMKTQLPKKFTAPGLPGLNPSQ 453
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSAT++Y L K +G VLVCAPSN+AVDQL E IH
Sbjct: 454 INAVKAVLQKPLSLIQGPPGTGKTVTSATVIYHLAKISGGQVLVCAPSNVAVDQLCECIH 513
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV L+LH Q+RN + N EL KL QLK + GELSS DEK++
Sbjct: 514 RTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNVELMKLTQLKNDMGELSSQDEKKF 573
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q++EPECM+P+++G K
Sbjct: 574 KQLTRAAEKEILSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMIPLVMGCK 633
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS FPSN
Sbjct: 634 QVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSAFPSNM 693
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +D+R L +DFPWPV DKPM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 694 FYEGSLQNGVTSDDRLLKDVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEK 753
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 754 IVTRFFKAGVKPSAIGIITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDAFQGREKD 813
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE
Sbjct: 814 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEG 873
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 874 NCLVEGPLSNLQTSLVQFSRPKQAYR 899
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/866 (60%), Positives = 652/866 (75%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KEL PHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 64 KELAPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESS 123
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 124 LGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 183
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL+WLV P++QEQ R R ++ IAKLEE+WK+N++AT DLEK VD++P VLL
Sbjct: 184 RSFLTWLVAAPSDQEQLRARHLSPQMIAKLEEMWKENSQATIADLEKATAVDDEPAPVLL 243
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 244 R--------------------YD-----------------------------------DA 248
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
+QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 249 FQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAV 308
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T F+ D++W
Sbjct: 309 GDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVW 368
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
KSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS P LP+LN SQ
Sbjct: 369 KSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQ 428
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 429 INAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIH 488
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GELSS DEKR
Sbjct: 489 RTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKSELGELSSQDEKRL 548
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 549 KQLTRAAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCK 608
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 609 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNM 668
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNG+ + +R ++DFPWP+ D PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 669 FYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSNLGNEEISASGTSYLNRTEAANVEK 728
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G++P+ IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 729 IVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKD 788
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE+
Sbjct: 789 FIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKER 848
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 849 HTLVEGPLSNLQESLIQFSRPKQAYR 874
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/866 (60%), Positives = 652/866 (75%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KEL PHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 49 KELAPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESS 108
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 109 LGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 168
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL+WLV P++QEQ R R ++ IAKLEE+WK+N++AT DLEK VD++P VLL
Sbjct: 169 RSFLTWLVAAPSDQEQLRARHLSPQMIAKLEEMWKENSQATIADLEKATAVDDEPAPVLL 228
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 229 R--------------------YD-----------------------------------DA 233
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
+QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 234 FQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKLAV 293
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T F+ D++W
Sbjct: 294 GDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVW 353
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
KSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS P LP+LN SQ
Sbjct: 354 KSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQ 413
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 414 INAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCERIH 473
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GELSS DEKR
Sbjct: 474 RTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKSELGELSSQDEKRL 533
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 534 KQLTRAAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLGCK 593
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 594 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNM 653
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNG+ + +R ++DFPWP+ D PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 654 FYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSNLGNEEISASGTSYLNRTEAANVEK 713
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G++P+ IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 714 IVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKD 773
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE+
Sbjct: 774 FIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKER 833
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 834 HTLVEGPLSNLQESLIQFSRPKQAYR 859
>gi|119183909|ref|XP_001242931.1| hypothetical protein CIMG_06827 [Coccidioides immitis RS]
Length = 1089
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/866 (60%), Positives = 648/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELPPHAC YCGIH+ + V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 77 KELPPHACCYCGIHNTSSVVKCLACNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESA 136
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LGETVLECY CG RN+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD W+PLI D
Sbjct: 137 LGETVLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSLWQPLIED 196
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WK+N+ AT +DLEK GVD++P VLL
Sbjct: 197 RSFLPWLVASPSDQEQLRARHLSPQMIAKLEEMWKENSSATVEDLEKATGVDDEPAPVLL 256
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 257 R--------------------YD-----------------------------------DA 261
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + V+WD+GLN K +A F L K + GD++L
Sbjct: 262 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLIVKWDLGLNNKHLASFVLPKLELGDVKLAV 321
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+YS + W G+G+VIKIP+N DEV +EL++ PTE T F+ D++W
Sbjct: 322 GDEMRLKYSGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVW 381
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
KSTSFDRMQ A++ FAVD+ SVS YI+HRLLG+ V + LPK F+AP LP LN SQ
Sbjct: 382 KSTSFDRMQSAMKTFAVDELSVSNYIFHRLLGNEVAAGPMKTQLPKKFTAPGLPGLNPSQ 441
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSAT++Y L K +G VLVCAPSN+AVDQL E IH
Sbjct: 442 INAVKAVLQKPLSLIQGPPGTGKTVTSATVIYHLAKISGGQVLVCAPSNVAVDQLCECIH 501
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV L+LH Q+RN + N EL KL QLK + GELSS DEK++
Sbjct: 502 RTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNVELMKLTQLKNDMGELSSQDEKKF 561
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q++EPECM+P+++G K
Sbjct: 562 KQLTRAAEKEILSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMIPLVMGCK 621
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS FPSN
Sbjct: 622 QVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSAFPSNM 681
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +D+R L +DFPWPV DKPM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 682 FYEGSLQNGVTSDDRLLKDVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEK 741
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 742 IVTRFFKAGVKPSAIGIITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDAFQGREKD 801
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE
Sbjct: 802 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEG 861
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 862 NCLVEGPLSNLQTSLVQFSRPKQAYR 887
>gi|212532107|ref|XP_002146210.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
gi|210071574|gb|EEA25663.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
Length = 1093
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/888 (59%), Positives = 654/888 (73%), Gaps = 69/888 (7%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
V +L + ++EEE KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS
Sbjct: 69 VGGRLQKQKYEEE---------KELPPHACAYCGIHNPSSVVKCLSCSKWFCSARGNTSS 119
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRA+HKEV LH LG+T+LECY CG +N F+LGFIPAK+D+VVVLLCR PC
Sbjct: 120 SHIVNHLVRARHKEVQLHPSSSLGDTILECYNCGTKNAFLLGFIPAKSDTVVVLLCRQPC 179
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
AA S KDMNWD +W+PLI DRSFL WLV P++QEQ R R ++ IAKLEE+WKDN+
Sbjct: 180 AAMPSSKDMNWDTSRWQPLIEDRSFLPWLVATPSDQEQLRARHLSPQMIAKLEEMWKDNS 239
Query: 253 EATFQDLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 311
AT DLEK VD++P VLLR YD
Sbjct: 240 TATIADLEKANSVDDEPAPVLLR--------------------YD--------------- 264
Query: 312 WDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGL 371
D YQYQN+FGPLVK+EADYD++LKESQ+Q+ + VRWD+GL
Sbjct: 265 --------------------DAYQYQNVFGPLVKIEADYDRKLKESQSQDGLVVRWDLGL 304
Query: 372 NKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK 430
N K +A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL+
Sbjct: 305 NNKHLASFVLPKLELGDVKLAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELR 364
Query: 431 SSA---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEV 487
+ PTE T F+ D++WK+TSFDRMQ A++ FAVD+ SVS Y++HRLLGH V
Sbjct: 365 AKGDHKSVPTECTHNFTADYVWKATSFDRMQYAMKTFAVDEMSVSGYLFHRLLGHEVAAA 424
Query: 488 LFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
+ +PK FS P LP+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K
Sbjct: 425 PMKTQMPKKFSVPGLPELNGSQINAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLAKIN 484
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
G VLVCAPSN+AVDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N E
Sbjct: 485 GGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVRFLSLHEQVRMNDSNIE 544
Query: 608 LKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSI 667
L KL QLK E GELSS DEK+++ L + AE+ +L NADVICCTCVGAGDPRL K KF ++
Sbjct: 545 LNKLNQLKSELGELSSQDEKKFKQLTRAAEREILTNADVICCTCVGAGDPRLAKFKFRTV 604
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG
Sbjct: 605 LIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGC 664
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG 787
P RL VQYRMHP LS+FPSN FYEGSLQNGV +R +DFPWPV + PM+F+ G
Sbjct: 665 SPIRLNVQYRMHPCLSEFPSNMFYEGSLQNGVSMAQRLRRDVDFPWPVAENPMMFWSNLG 724
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
EEI+ SGTSY+NRTEA+NVEKI TRF + G++P IG+ITPYEGQR+++V MQ G+
Sbjct: 725 NEEISASGTSYLNRTEAANVEKIVTRFFKAGVQPSGIGIITPYEGQRSYVVSSMQATGTF 784
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
+ Y+EIEVASVDAFQGREKD I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++
Sbjct: 785 KKEHYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGVVIL 844
Query: 908 GNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
GNPKVLSK PLWN LL +KE+K LVEGPL+NL+ESL+ FS+PKQ ++
Sbjct: 845 GNPKVLSKHPLWNYLLLHFKERKCLVEGPLSNLQESLVQFSRPKQAYR 892
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/880 (60%), Positives = 657/880 (74%), Gaps = 66/880 (7%)
Query: 87 DDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKH 144
+DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSGSHI+NHLVRAKH
Sbjct: 143 EDGYDYGKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 202
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
KEV LHKD PLGET+LECY CG RN+F+LGFI AK ++VVVLLCR PC + N+LKDMNWD
Sbjct: 203 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKLENVVVLLCREPCLSVNALKDMNWD 262
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N +A+ +DLEKPGV
Sbjct: 263 LSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGV 322
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P V+L+YED YQYQN+F PL+KLEADYDK KESQ+++NVTVRWD+GLNKK +AYF
Sbjct: 323 DDEPQPVVLKYEDAYQYQNVFAPLIKLEADYDKMTKESQSKDNVTVRWDIGLNKKRVAYF 382
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW-DVGLNKKSIAYFSLAK 383
K D + ++L + RL+ + T W VG K A +A
Sbjct: 383 VFPKEDNE-----------LRLVPGDELRLRYPGDSSHPT--WQSVGHVIKLTAQEEVAL 429
Query: 384 TDGDMRLMQG--DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATT 441
++R QG EL + +S D
Sbjct: 430 ---ELRASQGVPTELNVGFSVD-------------------------------------- 448
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
F+WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP
Sbjct: 449 -----FVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPG 503
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTS IVY + KQ VLVCAPSN+AV
Sbjct: 504 LPELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSGAIVYHMAKQGQGQVLVCAPSNVAV 563
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETG 619
DQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SE KL QLK+E G
Sbjct: 564 DQLAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEFHKLQQLKDEQG 623
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELSS+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LIDES QATEPE
Sbjct: 624 ELSSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPE 683
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++PFRL+VQYRMH
Sbjct: 684 CLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMH 743
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEG+LQNGV +ER S IDFPWPVP++PM FYV GQEEI+ SGTSY+
Sbjct: 744 PCLSEFPSNCFYEGTLQNGVTVNERHSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 803
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NRTEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL ++Y+EIEVAS
Sbjct: 804 NRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVAS 863
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GNPKVLSKQPLW
Sbjct: 864 VDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLW 923
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
N+LL YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 924 NSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 963
>gi|242774708|ref|XP_002478495.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722114|gb|EED21532.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1093
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/866 (60%), Positives = 645/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH
Sbjct: 82 KELPPHACAYCGIHNPSSVVKCLTCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPSSS 141
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 142 LGDTILECYNCGTKNAFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 201
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WKDN+ AT DLEK VD++P VLL
Sbjct: 202 RSFLPWLVATPSDQEQLRARHLSPQMIAKLEEMWKDNSSATIADLEKANSVDDEPAPVLL 261
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 262 R--------------------YD-----------------------------------DA 266
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 267 YQYQNVFGPLVKIEADYDRKLKESQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAV 326
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T F+ D++W
Sbjct: 327 GDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADYVW 386
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQ A++ FAVD+ SVS Y++HRLLGH V + +PK FS P LP+LN SQ
Sbjct: 387 KATSFDRMQYAMKTFAVDEMSVSGYLFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNGSQ 446
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 447 INAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIH 506
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GELSS DEK++
Sbjct: 507 RTGLKTVRVTAKSREDVESPVRFLSLHEQVRMNDSNIELNKLNQLKSELGELSSQDEKKF 566
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 567 KQLTRAAEREILTNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCK 626
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 627 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPSNM 686
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +R +DFPWPV + PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 687 FYEGSLQNGVSMAQRLRRDVDFPWPVAENPMMFWSNLGNEEISASGTSYLNRTEAANVEK 746
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G++P IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 747 IVTRFFKAGVQPSDIGIITPYEGQRSYVVSSMQATGTFKKEHYKEIEVASVDAFQGREKD 806
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE+
Sbjct: 807 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGVVILGNPKVLSKHPLWNYLLLHFKER 866
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
K LVEGPL+NL+ESL+ FS+PKQ ++
Sbjct: 867 KCLVEGPLSNLQESLVQFSRPKQAYR 892
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/865 (60%), Positives = 646/865 (74%), Gaps = 60/865 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELPPHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHIINHLVRA+HKEV LH L
Sbjct: 79 ELPPHACAYCGIHNPSSVVKCLSCSKWFCSARGNTSSSHIINHLVRARHKEVQLHPSSSL 138
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DR
Sbjct: 139 GDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIEDR 198
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
SFL WLV P++QEQ R R ++ IAKLEE+WKDN+ AT DLEK GVD++P VLLR
Sbjct: 199 SFLPWLVSQPSDQEQLRARHLSPQMIAKLEEMWKDNSNATIADLEKGAGVDDEPAPVLLR 258
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D Y
Sbjct: 259 --------------------YD-----------------------------------DAY 263
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKESQ+Q+ + VRWD GLN K +A F L K + GD++L G
Sbjct: 264 QYQNVFGPLVKIEADYDRKLKESQSQDGLIVRWDYGLNNKHLASFVLPKLELGDVKLAVG 323
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE++LRY+ + W G+G+VIKIP+N DEV +EL++ PTE T F+ D++WK
Sbjct: 324 DEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFTADYVWK 383
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + LP+ FS P LP+LN SQ+
Sbjct: 384 ATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKTQLPRKFSVPGLPELNGSQI 443
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+AVDQL E+IHR
Sbjct: 444 NAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQLCERIHR 503
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK E GELSS DEK+++
Sbjct: 504 TGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELNKLNQLKSELGELSSQDEKKFK 563
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 564 QLTRAAEREILTNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQ 623
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL+VQYRMHP LS+FPSN F
Sbjct: 624 VVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLQVQYRMHPCLSEFPSNMF 683
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV + R ++DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA+NVEKI
Sbjct: 684 YEGSLQNGVTRESRMRKEVDFPWPVGDSPMMFWSNLGNEEISASGTSYLNRTEAANVEKI 743
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G+KP+ IG+ITPYEGQR+++VQ MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 744 VTRFFKAGVKPQDIGIITPYEGQRSYVVQSMQANGTFKKENYKEIEVASVDAFQGREKDF 803
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL +KE+
Sbjct: 804 IVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERN 863
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPLNNL+ SL+ FS+PK ++
Sbjct: 864 CLVEGPLNNLQVSLLQFSRPKTTYR 888
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/866 (60%), Positives = 646/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP H+C YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 78 KELPSHSCAYCGIHNPSSVVKCLTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESS 137
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 138 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 197
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV PT+QEQ R R +T IAKLEE+WKDNA AT +DLEK GVD++P VLL
Sbjct: 198 RSFLPWLVSSPTDQEQLRARHLTPQMIAKLEEMWKDNAAATVEDLEKATGVDDEPAPVLL 257
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 258 R--------------------YD-----------------------------------DA 262
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 263 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAV 322
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PT+ T F+ D++W
Sbjct: 323 GDEMRLKYTGELRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVW 382
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS P LPDLN SQ
Sbjct: 383 KATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQ 442
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
AVK +Q+PLSLIQGPPGTGKTVTSA I+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 443 TNAVKSVLQKPLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPSNVAVDQLCERIH 502
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
+TGLK VRV AKSRE ++SPV FL+LH Q+ N + N EL KL QLK E GELSS DEK+Y
Sbjct: 503 KTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELVKLNQLKAELGELSSQDEKKY 562
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 563 KQLVRAAEREILSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCK 622
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 623 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNM 682
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FY+GSLQNGV ER L +DFPWPV PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 683 FYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEK 742
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ ++Y+EIEVASVDAFQGREKD
Sbjct: 743 IVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKD 802
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE+
Sbjct: 803 YIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEK 862
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 863 NCLVEGPLSNLQVSLVQFSRPKQAYR 888
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/866 (60%), Positives = 646/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP H+C YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 78 KELPSHSCAYCGIHNPSSVVKCLTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESS 137
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 138 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 197
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV PT+QEQ R R +T IAKLEE+WKDNA AT +DLEK GVD++P VLL
Sbjct: 198 RSFLPWLVSSPTDQEQLRARHLTPQMIAKLEEMWKDNAVATVEDLEKATGVDDEPAPVLL 257
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 258 R--------------------YD-----------------------------------DA 262
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 263 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAV 322
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PT+ T F+ D++W
Sbjct: 323 GDEMRLKYTGELRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVW 382
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS P LPDLN SQ
Sbjct: 383 KATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQ 442
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
AVK +Q+PLSLIQGPPGTGKTVTSA I+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 443 TNAVKSVLQKPLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPSNVAVDQLCERIH 502
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
+TGLK VRV AKSRE ++SPV FL+LH Q+ N + N EL KL QLK E GELSS DEK+Y
Sbjct: 503 KTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELVKLNQLKAELGELSSQDEKKY 562
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 563 KQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCK 622
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 623 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNM 682
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FY+GSLQNGV ER L +DFPWPV PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 683 FYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEK 742
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ ++Y+EIEVASVDAFQGREKD
Sbjct: 743 IVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKD 802
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE+
Sbjct: 803 YIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEK 862
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 863 NCLVEGPLSNLQVSLVQFSRPKQAYR 888
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/866 (60%), Positives = 646/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP H+C YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 84 KELPSHSCAYCGIHNPSSVVKCLTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESS 143
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 144 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 203
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV PT+QEQ R R +T IAKLEE+WKDNA AT +DLEK GVD++P VLL
Sbjct: 204 RSFLPWLVSSPTDQEQLRARHLTPQMIAKLEEMWKDNAAATVEDLEKATGVDDEPAPVLL 263
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 264 R--------------------YD-----------------------------------DA 268
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 269 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAV 328
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PT+ T F+ D++W
Sbjct: 329 GDEMRLKYTGELRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVW 388
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS P LPDLN SQ
Sbjct: 389 KATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQ 448
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
AVK +Q+PLSLIQGPPGTGKTVTSA I+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 449 TNAVKSVLQKPLSLIQGPPGTGKTVTSANIIYHLAKINGGQVLVCAPSNVAVDQLCERIH 508
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
+TGLK VRV AKSRE ++SPV FL+LH Q+ N + N EL KL QLK E GELSS DEK+Y
Sbjct: 509 KTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELVKLNQLKAELGELSSQDEKKY 568
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 569 KQLVRAAEREILSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCK 628
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 629 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNM 688
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FY+GSLQNGV ER L +DFPWPV PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 689 FYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEK 748
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ ++Y+EIEVASVDAFQGREKD
Sbjct: 749 IVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKD 808
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE+
Sbjct: 809 YIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEK 868
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 869 NCLVEGPLSNLQVSLVQFSRPKQAYR 894
>gi|409045768|gb|EKM55248.1| hypothetical protein PHACADRAFT_28301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1067
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/876 (60%), Positives = 652/876 (74%), Gaps = 66/876 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
F+ DD + +LPPHAC YCGIH PA V+ C +C+KWFCN RG+TS SHI+NHLVR
Sbjct: 77 FDAVLDDLKDEGQVDLPPHACSYCGIHSPASVVKCLVCQKWFCNSRGNTSASHIVNHLVR 136
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
AKHKEV LH + PLGET+ ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA + KD+
Sbjct: 137 AKHKEVILHAESPLGETIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAVS--KDI 194
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
+W+ W PLI DRSFLSWLVK P+E EQ R RQ++ QI +LE++W++N AT +
Sbjct: 195 SWNASLWAPLIDDRSFLSWLVKPPSETEQLRSRQISFQQINRLEDLWRENTSATLE---- 250
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
D DK + + Q + +R++
Sbjct: 251 --------------------------------DLDKPGVDDEPQP-ILLRYE-------- 269
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D YQYQNIFGPLVK+EADYDKRLKESQTQ +++VRWD+GLN+K +A+F L
Sbjct: 270 ----------DAYQYQNIFGPLVKIEADYDKRLKESQTQTDISVRWDLGLNQKRVAWFCL 319
Query: 382 AKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
K + G++RL GDEL+L+Y+ K W G GHV+KIP+N DE+GLEL+ S G P + T
Sbjct: 320 PKLESGEVRLAVGDELRLKYTGTLHKPWEGDGHVVKIPNNVSDEIGLELRRSEGVPVDIT 379
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
++VDF+WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH ++ R +PK FSAP
Sbjct: 380 HNYTVDFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGHELEPQTLRTQMPKRFSAP 439
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+YAVK +Q+PLSLIQGPPGTGKTVTSA+ VY L K VLVCAPSN+A
Sbjct: 440 GLPELNHSQMYAVKSVLQKPLSLIQGPPGTGKTVTSASTVYHLAKMNPGQVLVCAPSNVA 499
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQLTEKIH TGLKVVR+ AKSREA+DS V+FL LH Q+ N + EL+KL+QLK E GE
Sbjct: 500 VDQLTEKIHATGLKVVRLTAKSREALDSSVAFLTLHQQVANNTTHVELQKLIQLKNEQGE 559
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DE++Y+ L + EK +L ADVICCTCVGAGDPRL K+KF ++LIDE+ QA EP C
Sbjct: 560 LSSNDERKYKALIRQCEKEILSAADVICCTCVGAGDPRLSKLKFRTVLIDEATQAAEPGC 619
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
KQ++LVGDH QLGPV+M KKAARAGL+QSLFERLVVLG RP RL+VQYRMHP
Sbjct: 620 --------KQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 671
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEG+LQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++N
Sbjct: 672 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 731
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEASNVEKI T+F + G+ P QIGV+TPYEGQR+++V +MQ+ G+L +Y+EIEVASV
Sbjct: 732 RTEASNVEKIVTKFFKSGVVPNQIGVVTPYEGQRSYIVNYMQFNGTLKKDLYKEIEVASV 791
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW+
Sbjct: 792 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWH 851
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LL YKE+ LVEGPLNNL+ S+I FSKP++ K
Sbjct: 852 YLLTHYKEKNCLVEGPLNNLQPSMIQFSKPRRTLSK 887
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/867 (60%), Positives = 646/867 (74%), Gaps = 60/867 (6%)
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
+KELP H+C YCGIH+P V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 78 DKELPIHSCAYCGIHNPGTVVKCLTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPES 137
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI
Sbjct: 138 SLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIE 197
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVL 272
DRSFL WLV P++QEQ R R ++ IAKLEE+WKDNA AT +DLEK GVD++P VL
Sbjct: 198 DRSFLPWLVSSPSDQEQLRARHLSPQMIAKLEEMWKDNAAATVEDLEKATGVDDEPAPVL 257
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
LR YD D
Sbjct: 258 LR--------------------YD-----------------------------------D 262
Query: 333 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLM 391
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 263 AYQYQNVFGPLVKIEADYDRKLKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLA 322
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFI 448
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PT+ T F+ D++
Sbjct: 323 VGDEMRLKYTGELRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYV 382
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 508
WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS P LPDLN S
Sbjct: 383 WKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSS 442
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
Q AVK +Q+PLSLIQGPPGTGKTVTSA I+Y L K G VLVCAPSN+AVDQL E+I
Sbjct: 443 QTNAVKSVLQKPLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVDQLCERI 502
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR 628
HRTGLK VRV AKSRE ++SPV FL+LH Q+ N + N EL KL QLK E GELSS DEK+
Sbjct: 503 HRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELVKLNQLKAELGELSSQDEKK 562
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
++ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG
Sbjct: 563 FKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGC 622
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 623 KQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSN 682
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FY+GSLQNGV ER L +DFPWPV PM+F+ G EEI+ SGTSY+NRTEA+NVE
Sbjct: 683 MFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVE 742
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
KI TRF + G+KP IG+ITPYEGQR+++V MQ G+ ++Y+EIEVASVDAFQGREK
Sbjct: 743 KIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREK 802
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE
Sbjct: 803 DYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKE 862
Query: 929 QKVLVEGPLNNLKESLILFSKPKQYFK 955
+ LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 863 KNCLVEGPLSNLQVSLVQFSRPKQAYR 889
>gi|312071929|ref|XP_003138834.1| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1141
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 562/1013 (55%), Positives = 695/1013 (68%), Gaps = 135/1013 (13%)
Query: 4 DAYGPSSQTLTFLDTEETD--LIGGDTQGSEFDF-TDFTLPSQSQTQASQLDSVNQIQVN 60
D YG S +L F+DT + D L+ G TQ S+F+F FTLPSQ T +Q Q
Sbjct: 7 DEYGTPSLSLNFVDTPDGDSSLLHGATQDSQFEFDQQFTLPSQGWTGTLPEVGADQSQ-- 64
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICK 120
EL F +EE+ +LP HAC+YCGIHDPA V MC IC+
Sbjct: 65 ------------------ELVFVDEEEVP---VPGQLPAHACRYCGIHDPATVAMCIICQ 103
Query: 121 KWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY---TCGV---------- 167
KWFCNGRG TS HI+ HLVR++HKEV+LHK+G LGET E CG+
Sbjct: 104 KWFCNGRGSTSAGHIVIHLVRSQHKEVSLHKEGALGETEFEAKRPDACGMLVASGIKRQS 163
Query: 168 ----------RNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSF 217
NIF+LG+IPAKAD+VVV+LCR+PCA Q LKD +W ++WKPLI+DR
Sbjct: 164 GTCEIMSSLEGNIFMLGYIPAKADTVVVVLCRSPCANQAVLKDHSWQVDEWKPLISDRQL 223
Query: 218 LSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYED 277
LSWLVK+P+EQEQ R RQ+++ QI +LEE+WK++ +A F+DLE+PG+DE+P
Sbjct: 224 LSWLVKIPSEQEQLRARQISAVQINRLEELWKEDPKAVFEDLERPGMDEEP--------- 274
Query: 278 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQ 337
E V ++++ D YQY+
Sbjct: 275 ----------------------------ERVQLKYE------------------DAYQYK 288
Query: 338 NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDEL 396
+F PLVK EADYD+R KESQTQ VRWDVGLN+K A+F L K ++G M+LM GDEL
Sbjct: 289 RVFEPLVKAEADYDRREKESQTQSVGHVRWDVGLNRKPQAFFQLPKFSEGSMKLMLGDEL 348
Query: 397 KLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA-GAPTEATTGFSVDFIWKSTSFD 455
+L++S A WS +G VIKIPDN DEVG+E++ A PT+ T F+ +F+W STSFD
Sbjct: 349 RLKHSQTAGGEWSSIGCVIKIPDNHNDEVGIEMRLKAENVPTDTRTNFTCEFVWNSTSFD 408
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
RMQ AL D+ VS +IYH+L+GH++D+++F+ LPK FS P LP+LN SQV+AVK
Sbjct: 409 RMQAALSLLGQDEDCVSQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPELNHSQVHAVKT 468
Query: 516 AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKV 575
+QRPLSLIQGPPGTGKTVTSATIVY LVKQT VLVCAPSNIAVDQL EKIHRTGLKV
Sbjct: 469 VLQRPLSLIQGPPGTGKTVTSATIVYHLVKQTNGQVLVCAPSNIAVDQLAEKIHRTGLKV 528
Query: 576 VRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKN 635
VR+CAKSRE +DSPV+FLALHNQ++ + +EL KL QLKEE GEL+ ADE+R+R L+
Sbjct: 529 VRLCAKSRETLDSPVAFLALHNQLKALHGAAELHKLQQLKEEIGELADADERRFRALRIA 588
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
E LL ADVICCTCV A D RL ++ +LIDES QATEPE MV V+ G +QL+LVG
Sbjct: 589 KECQLLAAADVICCTCVSAADSRLSHMRIKCVLIDESTQATEPEVMVAVVCGVRQLVLVG 648
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSL 755
DHCQLGPV+MCKKAA+AGLSQSLFERLV+LG RP RL+VQYRMHP LS FPSN FYEGSL
Sbjct: 649 DHCQLGPVIMCKKAAKAGLSQSLFERLVLLGNRPIRLQVQYRMHPALSSFPSNVFYEGSL 708
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI 815
QNGV ER+L ID+ WPVPDKPM+F+ GQEE++ SGTS++NRTEA+NVEK+ TRF+
Sbjct: 709 QNGVTEGERQLIGIDWQWPVPDKPMMFWSCYGQEELSSSGTSFLNRTEAANVEKLATRFL 768
Query: 816 RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ----------- 864
+ G+KPEQIG+ITPYEGQR+++VQ MQ QG+L +K+Y E+EVA+VDAFQ
Sbjct: 769 KAGIKPEQIGIITPYEGQRSYIVQFMQTQGALHSKLYLEMEVANVDAFQSYQQVGYSTET 828
Query: 865 ------------------GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
GREKD+II++CVRSNDHQGIGFLND RRLNVALTRAK+G+I+
Sbjct: 829 SRTLPLKVIGRSMRFLHTGREKDIIIVTCVRSNDHQGIGFLNDSRRLNVALTRAKFGLII 888
Query: 907 IGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
+GN KVLS+ PLWN LL+ +KE+ LVEGPLNNLK S I SKP++ NM
Sbjct: 889 VGNAKVLSRHPLWNYLLSVFKEKGCLVEGPLNNLKPSPITLSKPRRVPHVMNM 941
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/866 (60%), Positives = 645/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP H+C YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH +
Sbjct: 83 KELPVHSCAYCGIHNPSSVVKCLTCTKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESS 142
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI D
Sbjct: 143 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIED 202
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WKDNA AT +DLEK GVD++P VLL
Sbjct: 203 RSFLPWLVSSPSDQEQLRARHLSPQMIAKLEEMWKDNASATVEDLEKATGVDDEPAPVLL 262
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 263 R--------------------YD-----------------------------------DA 267
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 268 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLVVRWDLGLNNKHLASFVLPKLELGDVKLAV 327
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PT+ T F+ D++W
Sbjct: 328 GDEMRLKYTGELRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCTHNFTADYVW 387
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS P LPDLN SQ
Sbjct: 388 KATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQ 447
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
AVK +Q+PLSLIQGPPGTGKTVTSA I+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 448 TNAVKSVLQKPLSLIQGPPGTGKTVTSANIIYNLAKINGGQVLVCAPSNVAVDQLCERIH 507
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV FL+LH Q+ N + N EL KL QLK E GELSS DEK++
Sbjct: 508 RTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNIELVKLNQLKAELGELSSQDEKKF 567
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 568 KQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCK 627
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPSN
Sbjct: 628 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNM 687
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FY+GSLQNGV ER L +DFPWPV PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 688 FYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSNLGNEEISASGTSYLNRTEAANVEK 747
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ ++Y+EIEVASVDAFQGREKD
Sbjct: 748 IVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKD 807
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KE+
Sbjct: 808 YIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLLHFKEK 867
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ F +PKQ ++
Sbjct: 868 NCLVEGPLSNLQVSLVQFPRPKQAYR 893
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/876 (61%), Positives = 654/876 (74%), Gaps = 59/876 (6%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
F+ DD + +LPPHAC YCGIH PA V+ C IC KWFCN RG+TS SHI+NHLVR
Sbjct: 61 FDAVLDDLKDEGQVDLPPHACSYCGIHSPASVVKCLICSKWFCNSRGNTSASHIVNHLVR 120
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
AKHKEV LH + PLGET+ ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA + KD+
Sbjct: 121 AKHKEVILHSESPLGETIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAAVS--KDI 178
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
+W+ W PLI DRSFLSWLVK P+EQE Q+ S QI +FQ +
Sbjct: 179 SWNPALWAPLIDDRSFLSWLVKPPSEQE-----QLRSRQI-------------SFQQIN- 219
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
R ED ++ +N L LE K E V I
Sbjct: 220 ------------RLEDLWR-ENANATLDDLE-------KPGVDDEPQPV----------I 249
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
++ D YQYQNIFGPLVK+EADYDKRLKES TQ ++T+RWD+GLN+K +A+F L
Sbjct: 250 THYE------DAYQYQNIFGPLVKIEADYDKRLKESLTQTDITIRWDLGLNQKRVAWFCL 303
Query: 382 AKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
K + G++RL GDEL+L+Y+ K W G GHVIKIP+N DE+GLEL+ S G PTE T
Sbjct: 304 PKLESGEVRLAVGDELRLKYNGGLHKPWEGDGHVIKIPNNVSDEIGLELRRSEGVPTEIT 363
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
G++ DF+WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH ++ + R +PK FSAP
Sbjct: 364 HGYTADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGHELEPQVLRTQMPKRFSAP 423
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP+LN SQ+YAVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+A
Sbjct: 424 GLPELNHSQMYAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVA 483
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VDQLTEKIH TGLKVVR+ AKSREA+DS VSFL LH Q+ N + EL+KL+QLK E GE
Sbjct: 484 VDQLTEKIHATGLKVVRLSAKSREALDSSVSFLTLHQQVANNTTHVELQKLIQLKNEQGE 543
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DE++Y+ L + EK +L ADVICCTCVGAGDPRL K+KF ++LIDE+ QA EPEC
Sbjct: 544 LSSNDERKYKALIRQCEKEILGAADVICCTCVGAGDPRLSKLKFRTVLIDEATQAAEPEC 603
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAARAGL+QSLFERLVVLG RP RL+VQYRMHP
Sbjct: 604 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 663
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEG+LQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++N
Sbjct: 664 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 723
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
R ASNVEKI T+F + G+ P QIGVITPYEGQR+++V +MQ+ GSL +Y+EIEVASV
Sbjct: 724 R-RASNVEKIVTKFFKSGVVPSQIGVITPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASV 782
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW+
Sbjct: 783 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWH 842
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
LL YKE+ LVEGPLNNL+ S+I FSKP++ K
Sbjct: 843 YLLTHYKEKNCLVEGPLNNLQPSMIQFSKPRRTLGK 878
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 1105 bits (2859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/886 (59%), Positives = 656/886 (74%), Gaps = 66/886 (7%)
Query: 80 LQFEEE-EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHII 136
L FEE +DDG EF + HAC+YCG+ +PA V+ CN+ C+KWFCN RG+TSGSHI+
Sbjct: 115 LNFEETGDDDGYEFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIV 174
Query: 137 NHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQN 196
NHLVRAKHKEV LHKD PLGET+LECY CG RN+F+LGFI AK +SVVVLLCR PC N
Sbjct: 175 NHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLNVN 234
Query: 197 SLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATF 256
+LKDMNWD QW PLI DR FL WLVK+P+EQEQ R RQ+++ QI K+EE+WK N +AT
Sbjct: 235 ALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDATL 294
Query: 257 QDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGL 316
+DLEKPGVD++P V L+YED YQYQN+F PL+KLEADYDK +KESQ+++NVT+RWD+GL
Sbjct: 295 EDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTIRWDIGL 354
Query: 317 NKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV-TVRWDVGLNKKS 375
NKK +AYF K + + + + G ++L D Q+ +V T + +V L
Sbjct: 355 NKKRVAYFVFPKDN----ELRLVPGDELRLRYSGDAAHPAWQSVGHVLTAQEEVAL---- 406
Query: 376 IAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGA 435
++R QG + + + + W
Sbjct: 407 -----------ELRASQGVPVDVNHGFSVDFVW--------------------------- 428
Query: 436 PTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPK 495
KSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ R LP+
Sbjct: 429 --------------KSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVENQTVRNALPR 474
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F AP LP+LN SQV AVK+ +Q+P+SLIQGPPGTGKTVTSA IVY + KQ VLVCA
Sbjct: 475 RFGAPGLPELNASQVLAVKNVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCA 534
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQ 613
PSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SEL KL Q
Sbjct: 535 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQ 594
Query: 614 LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESM 673
LK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTC GAGDPRL +F +LIDES
Sbjct: 595 LKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCGGAGDPRLSNFRFRQVLIDEST 654
Query: 674 QATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE 733
QATEPEC++P++LGAKQ++ VGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++P RL+
Sbjct: 655 QATEPECLIPLVLGAKQVVFVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQ 714
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
VQYRMHP LS+FPSN FYEG+LQNGV +ER+ S IDFPWPVP++PM FYV GQEEI+
Sbjct: 715 VQYRMHPCLSEFPSNNFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISA 774
Query: 794 SGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
SGTSY+NRTEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M G+L ++Y+
Sbjct: 775 SGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYK 834
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GNPKVL
Sbjct: 835 EIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVL 894
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
SKQPLWN+LL YKE + LVEGPLNNLK+S++ F KPK+ + +
Sbjct: 895 SKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRL 940
>gi|452987990|gb|EME87745.1| hypothetical protein MYCFIDRAFT_148374 [Pseudocercospora fijiensis
CIRAD86]
Length = 1091
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/865 (60%), Positives = 642/865 (74%), Gaps = 60/865 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELP HAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH PL
Sbjct: 93 ELPAHACAYCGIHNPSSVVKCLTCAKWFCSARGNTSSSHIVNHLVRARHKEVQLHPSSPL 152
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DR
Sbjct: 153 GDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSKWQPLIEDR 212
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
+FL WLV PT+QE R R + IAKLEE+WKDN+ AT QDLEK G+D++P VLLR
Sbjct: 213 AFLPWLVNEPTDQELTRARYLPPPVIAKLEEMWKDNSSATIQDLEKSAGIDDEPAPVLLR 272
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D Y
Sbjct: 273 --------------------YD-----------------------------------DAY 277
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKE+Q+Q+N+ VRWD GLN K +A F L K + GD++L G
Sbjct: 278 QYQNVFGPLVKIEADYDRKLKEAQSQDNLIVRWDFGLNNKHLASFVLPKLELGDVKLAVG 337
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE++LRY+ + W G+G+VIKIP+N DEV +EL+S PTE T F+ D++WK
Sbjct: 338 DEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTIELRSRGDHKSIPTECTHNFTADYVWK 397
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQ A++ FAVD+ SVS YI+HRLLGH+V+ + ++P+ FS PNLPDLN SQ+
Sbjct: 398 ATSFDRMQHAMKTFAVDEMSVSGYIFHRLLGHDVNAAPLKVNMPRKFSVPNLPDLNGSQI 457
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 458 NAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLSKMNGGQVLVCAPSNVAVDQLCERIHI 517
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLKVVRV AKSRE +S V FL+LH Q+ + N EL KL QLK+E GELSS DEK+++
Sbjct: 518 TGLKVVRVTAKSREDAESNVGFLSLHRQVSMNDTNVELSKLKQLKDEQGELSSQDEKKFK 577
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 578 ALTRAAEREILQNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQ 637
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA+AGL+QSLFERLVVLG P RL+VQYRMHP LS+FPSN F
Sbjct: 638 VVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVVLGCAPIRLQVQYRMHPCLSEFPSNMF 697
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNG+ +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA NVEKI
Sbjct: 698 YEGSLQNGITMQQRLRKDVDFPWPVADSPMMFWSNLGNEEISASGTSYLNRTEAQNVEKI 757
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G+ P IG+ITPYEGQR+++VQ MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 758 VTRFFKAGVSPSAIGIITPYEGQRSYVVQSMQQTGTFKKEHYKEIEVASVDAFQGREKDF 817
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG +++GNPKVLSK PLW+ LL +KE+
Sbjct: 818 IVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGCVILGNPKVLSKHPLWHYLLLHFKERN 877
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPLNNL+ SL+ FS+PK ++
Sbjct: 878 CLVEGPLNNLQVSLLQFSRPKTSYR 902
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/876 (60%), Positives = 649/876 (74%), Gaps = 60/876 (6%)
Query: 85 EEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKH 144
++ GN ELP HAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+H
Sbjct: 54 QKSQGNGEEEIELPAHACAYCGIHNPSSVVKCLSCNKWFCSARGNTSSSHIVNHLVRARH 113
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
KEV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCA+ S KDMNWD
Sbjct: 114 KEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCASMPSSKDMNWD 173
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-G 263
+W+PLI DRSFL WLV PT+QEQ R R ++ IAKLEE+WKDN++AT +DLEK
Sbjct: 174 TSRWQPLIEDRSFLPWLVGAPTDQEQLRARHLSPQLIAKLEEMWKDNSQATLEDLEKATA 233
Query: 264 VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 323
VD++P VLLR YD
Sbjct: 234 VDDEPAPVLLR--------------------YD--------------------------- 246
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 383
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K
Sbjct: 247 --------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFVLPK 298
Query: 384 TD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEA 439
+ GD++L GDE++++Y+ + W G+G+VIKIP+N DEV +EL++ PTE
Sbjct: 299 LELGDVKLAVGDEMRIKYNGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTEC 358
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
T F D++WKSTSFDRMQ A++ FAVD+QSVS YI+HRLLGH V + +PK FS
Sbjct: 359 THNFMADYVWKSTSFDRMQCAMKTFAVDEQSVSGYIFHRLLGHEVAAAPMKTQIPKKFSV 418
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
P LPDLN SQ+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+
Sbjct: 419 PGLPDLNGSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNV 478
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVDQL E+IHRTGLK VRV AKSRE ++S V FL+LH Q+R + N EL KL QLK E G
Sbjct: 479 AVDQLCERIHRTGLKTVRVTAKSREDVESAVGFLSLHEQVRMNDSNIELVKLNQLKAELG 538
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELSS DEKR + L ++AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPE
Sbjct: 539 ELSSQDEKRLKQLTRSAEREILTNADVICCTCVGAGDPRLSKGKFRTVLIDESTQSAEPE 598
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
CM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMH
Sbjct: 599 CMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMH 658
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNG+ +R +DFPWP+ D PM+F+ G EEI+ SGTSY+
Sbjct: 659 PCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDDPMMFWSNLGNEEISASGTSYL 718
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NRTEA+NVEKI TRF + G++P+ IG+ITPYEGQR+++V MQ G+ + Y+EIEVAS
Sbjct: 719 NRTEATNVEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQANGTFKKEHYKEIEVAS 778
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRA++G++++GNPKVLSK PLW
Sbjct: 779 VDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNVALTRARFGLVILGNPKVLSKHPLW 838
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
N LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 839 NCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYR 874
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/865 (61%), Positives = 639/865 (73%), Gaps = 60/865 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELPPHAC YCGIH P+ V+ C C KWFC+GRG+TS SHI+NHLVRA+HKEV LH L
Sbjct: 91 ELPPHACAYCGIHSPSAVVKCLSCNKWFCSGRGNTSSSHIVNHLVRARHKEVCLHPSSSL 150
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
GET LECY CG RN+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DR
Sbjct: 151 GETTLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWEPLIQDR 210
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLLR 274
SFL WLV P++ EQ R R + IAKLEE+WK+N A DLEK GVD++P VLLR
Sbjct: 211 SFLPWLVSEPSDAEQMRARHLQPQAIAKLEELWKENPAAVIGDLEKGNGVDDEPQPVLLR 270
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D Y
Sbjct: 271 --------------------YD-----------------------------------DAY 275
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K + GD++L G
Sbjct: 276 QYQNVFGPLVKIEADYDRKLKESQSQDGLIVRWDIGLNNKHLASFMLPKLELGDVKLAVG 335
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE++LRY D + W G+G VIKIP+N DEV +EL+ A PTE T FS D++WK
Sbjct: 336 DEMRLRYVGDLRQHWEGVGFVIKIPNNMSDEVTIELRKGANDKSVPTECTHSFSADYVWK 395
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQLA++ FAVD+ SVS YIYHRLLGH+V + LP+ FS P LP+LN SQV
Sbjct: 396 ATSFDRMQLAMKNFAVDEMSVSGYIYHRLLGHDVAAAPLKTPLPRRFSVPGLPELNISQV 455
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK +Q+PLSLIQGPPGTGKTVTSATIVY L K +GS VLVCAPSN+AVDQLTEKIHR
Sbjct: 456 CAVKSVLQKPLSLIQGPPGTGKTVTSATIVYHLAKLSGSQVLVCAPSNVAVDQLTEKIHR 515
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
T LKVVR+ AKSRE ++S VSFL+LH Q+R N EL KL QLK+E GELS DEK+++
Sbjct: 516 TSLKVVRLTAKSREDVESQVSFLSLHEQVRINNTNVELVKLRQLKDELGELSLQDEKKFK 575
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 576 HLTRAAEKEILTNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQ 635
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
L+LVGDH QLGPV+M KKAARAGL QSLFERLV+LG P RL VQYRMHP LS+FPSN F
Sbjct: 636 LVLVGDHQQLGPVIMNKKAARAGLHQSLFERLVILGCAPIRLNVQYRMHPCLSEFPSNMF 695
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA+ EKI
Sbjct: 696 YEGSLQNGVTVQERLRRNVDFPWPVVDSPMMFWSNLGNEEISASGTSYLNRTEAAACEKI 755
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
++F + G+ P QIG+ITPYEGQR+++V MQ GS ++Y++IEVASVDAFQGREKD
Sbjct: 756 ISKFFKAGVSPSQIGIITPYEGQRSYIVSSMQTNGSHKKELYKDIEVASVDAFQGREKDY 815
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSNDHQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW++LL YKE
Sbjct: 816 IVLSCVRSNDHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHHLLLHYKEHN 875
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ S I FS+P+Q ++
Sbjct: 876 CLVEGPLSNLQISFIQFSRPRQSYR 900
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/876 (59%), Positives = 648/876 (73%), Gaps = 60/876 (6%)
Query: 85 EEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKH 144
++ GN ELP HAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+H
Sbjct: 54 QKSQGNGEEEIELPAHACAYCGIHNPSSVVKCLSCNKWFCSARGNTSSSHIVNHLVRARH 113
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
KEV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCA+ S KDMNWD
Sbjct: 114 KEVQLHPGSSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCASMPSSKDMNWD 173
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-G 263
+W+PLI DRSFL WLV PT+QEQ R R ++ IAKLEE+WKDN++AT +DL+K
Sbjct: 174 TSRWQPLIEDRSFLPWLVGAPTDQEQLRARHLSPQLIAKLEEMWKDNSQATLEDLDKATA 233
Query: 264 VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 323
VD++P VLLR YD
Sbjct: 234 VDDEPAPVLLR--------------------YD--------------------------- 246
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 383
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K
Sbjct: 247 --------DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFVLPK 298
Query: 384 TD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEA 439
+ GD++L GDE++++Y+ + W G+G+VIKIP+N DEV +EL++ PTE
Sbjct: 299 LELGDVKLAVGDEMRIKYNGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTEC 358
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
T F D++WKSTSFDRMQ A++ FAVD+QSVS YI+HRLLGH V + +PK FS
Sbjct: 359 THNFMADYVWKSTSFDRMQCAMKTFAVDEQSVSGYIFHRLLGHEVAAAPMKTQIPKKFSV 418
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
P LPDLN SQ+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+
Sbjct: 419 PGLPDLNGSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNV 478
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVDQL E+IHRTGLK VRV AKSRE ++S V FL+LH Q+R + N EL KL QLK E G
Sbjct: 479 AVDQLCERIHRTGLKTVRVTAKSREDVESAVGFLSLHEQVRMNDSNIELVKLNQLKAELG 538
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELSS DEKR + L ++AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPE
Sbjct: 539 ELSSQDEKRLKQLTRSAEREILTNADVICCTCVGAGDPRLSKGKFRTVLIDESTQSAEPE 598
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
CM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMH
Sbjct: 599 CMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMH 658
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNG+ +R +DFPWP+ D PM+F+ G EEI+ SGTSY+
Sbjct: 659 PCLSEFPSNMFYEGSLQNGITIADRVRRDVDFPWPIIDDPMMFWSNLGNEEISASGTSYL 718
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NRTEA+NVEKI TRF + G++P IG+ITPYEGQR+++V MQ G+ + Y+EIEVAS
Sbjct: 719 NRTEATNVEKIVTRFFKAGVQPRDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVAS 778
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVRSNDHQGIGFL+DPRRLNVALTRA++G++++GNPKVLSK PLW
Sbjct: 779 VDAFQGREKDYIILSCVRSNDHQGIGFLSDPRRLNVALTRARFGLVILGNPKVLSKHPLW 838
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
N LL +KE+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 839 NCLLQHFKERHCLVEGPLSNLQESLIQFSRPKQAYR 874
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/869 (59%), Positives = 651/869 (74%), Gaps = 36/869 (4%)
Query: 84 EEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAK 143
+EE + N F E HAC YCGIH+P V+ C C KWFCN RG+TS SHI+NHLV+AK
Sbjct: 68 DEEIERNSF--GEGVEHACSYCGIHNPQCVVKCLHCNKWFCNSRGNTSASHIVNHLVKAK 125
Query: 144 HKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNW 203
HKEV LHK+ LG+T+ ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S +D+NW
Sbjct: 126 HKEVILHKESALGDTIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAALTSSRDINW 185
Query: 204 DQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG 263
D QW +I DR FLSWLVKVP+E EQ R RQ++ AQI+KLEE+W++N A +D E
Sbjct: 186 DTSQWSAIIDDRQFLSWLVKVPSEAEQLRARQISLAQISKLEELWRENPNAKLEDAEAQS 245
Query: 264 VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 323
+E+ +LL+YED YQYQNI GPLVK+EADYDKR+KESQT+ ++T+RWD+GLN+K +A+
Sbjct: 246 GEEEMQPILLKYEDAYQYQNILGPLVKVEADYDKRMKESQTENDITIRWDMGLNQKRLAW 305
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 383
F + K + V+L + +LK + T +V ++ NK
Sbjct: 306 FCMPKLESGE----------VRLAVGDELKLKFAGTTSSVGIKGLQAFNKAGWG------ 349
Query: 384 TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGF 443
+ GD W G+G V+KIP+N DE+ LEL+ + G P + T GF
Sbjct: 350 SSGD------------------AVWEGVGSVVKIPNNASDEICLELRRNDGVPFDCTHGF 391
Query: 444 SVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 503
SVDFIWKSTSFDRMQ A++ FA+D++SVS YIYH+LLGH V+ + R +PK F+APNLP
Sbjct: 392 SVDFIWKSTSFDRMQAAMKTFAIDEKSVSGYIYHKLLGHEVEPQVLRTQMPKRFAAPNLP 451
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+AVD
Sbjct: 452 ELNHSQMSAVKAVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDH 511
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L EKIH+TGLKVVR+ AKSREA+DS V FL+LH+Q+ N + + EL+KL+QL+ + GELS
Sbjct: 512 LCEKIHQTGLKVVRLAAKSREALDSSVDFLSLHSQVANADTHHELQKLIQLRNDQGELSQ 571
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
+DE++Y+ L K EK +L+ ADVIC TCVGAGDPRL K KF ++LIDE+ Q+ EPECM+P
Sbjct: 572 SDERKYKTLVKACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIP 631
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+++G KQ +LVGDH QLGPV+M KKAARAGLSQSLFERLV+LG P RL+VQYRMHP LS
Sbjct: 632 LVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHPIRLQVQYRMHPCLS 691
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
+F SN FYEG+LQNGV A ER +DFPWPV D PM F+ G EEI+ SGTS++NRTE
Sbjct: 692 EFSSNLFYEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQNLGTEEISSSGTSFLNRTE 751
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
ASNVEK+ T+F + G+ P QIGVITPYEGQR+++ +MQ GSL +Y+E+EVASVDAF
Sbjct: 752 ASNVEKMVTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAF 811
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW LL
Sbjct: 812 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLL 871
Query: 924 NFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+ YKE+ VEGPL+NL+ S++ FS+PK+
Sbjct: 872 SHYKEKGCFVEGPLSNLQPSMVQFSRPKK 900
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/869 (59%), Positives = 651/869 (74%), Gaps = 36/869 (4%)
Query: 84 EEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAK 143
+EE + N F E HAC YCGIH+P V+ C C KWFCN RG+TS SHI+NHLV+AK
Sbjct: 68 DEEIERNSF--GEGVEHACSYCGIHNPQCVVKCLHCNKWFCNSRGNTSASHIVNHLVKAK 125
Query: 144 HKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNW 203
HKEV LHK+ LG+T+ ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S +D+NW
Sbjct: 126 HKEVILHKESALGDTIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAALTSSRDINW 185
Query: 204 DQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG 263
D QW +I DR FLSWLVKVP+E EQ R RQ++ AQI+KLEE+W++N A +D E
Sbjct: 186 DTSQWSAIIDDRQFLSWLVKVPSEAEQLRARQISLAQISKLEELWRENPNAKLEDAEAQS 245
Query: 264 VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 323
+E+ +LL+YED YQYQNI GPLVK+EADYDKR+KESQT+ ++T+RWD+GLN+K +A+
Sbjct: 246 GEEEMQPILLKYEDAYQYQNILGPLVKVEADYDKRMKESQTENDITIRWDMGLNQKRLAW 305
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 383
F + K + V+L + +LK + T +V ++ NK
Sbjct: 306 FCMPKLESGE----------VRLAVGDELKLKFAGTTSSVGIKGLQAFNKAGWG------ 349
Query: 384 TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGF 443
+ GD W G+G V+KIP+N DE+ LEL+ + G P + T GF
Sbjct: 350 SSGD------------------AVWEGVGSVVKIPNNASDEICLELRRNDGVPFDCTHGF 391
Query: 444 SVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 503
SVDFIWKSTSFDRMQ A++ FA+D++SVS YIYH+LLGH V+ + R +PK F+APNLP
Sbjct: 392 SVDFIWKSTSFDRMQAAMKTFAIDEKSVSGYIYHKLLGHEVEPQVLRTQMPKRFAAPNLP 451
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+AVD
Sbjct: 452 ELNHSQMSAVKAVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDH 511
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L EKIH+TGLKVVR+ AKSREA+DS V FL+LH+Q+ N + + EL+KL+QL+ + GELS
Sbjct: 512 LCEKIHQTGLKVVRLAAKSREALDSSVDFLSLHSQVANADTHHELQKLIQLRNDQGELSQ 571
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
+DE++Y+ L K EK +L+ ADVIC TCVGAGDPRL K KF ++LIDE+ Q+ EPECM+P
Sbjct: 572 SDERKYKALVKACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIP 631
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+++G KQ +LVGDH QLGPV+M KKAARAGLSQSLFERLV+LG P RL+VQYRMHP LS
Sbjct: 632 LVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHPIRLQVQYRMHPCLS 691
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
+F SN FYEG+LQNGV A ER +DFPWPV D PM F+ G EEI+ SGTS++NRTE
Sbjct: 692 EFSSNLFYEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQNLGTEEISSSGTSFLNRTE 751
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
ASNVEK+ T+F + G+ P QIGVITPYEGQR+++ +MQ GSL +Y+E+EVASVDAF
Sbjct: 752 ASNVEKMVTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAF 811
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW LL
Sbjct: 812 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLL 871
Query: 924 NFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+ YKE+ VEGPL+NL+ S++ FS+PK+
Sbjct: 872 SHYKEKGCFVEGPLSNLQPSMVQFSRPKK 900
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/869 (59%), Positives = 651/869 (74%), Gaps = 36/869 (4%)
Query: 84 EEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAK 143
+EE + N F E HAC YCGIH+P V+ C C KWFCN RG+TS SHI+NHLV+AK
Sbjct: 68 DEEIERNSF--GEGVEHACSYCGIHNPQCVVKCLHCNKWFCNSRGNTSASHIVNHLVKAK 125
Query: 144 HKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNW 203
HKEV LHK+ LG+T+ ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S +D+NW
Sbjct: 126 HKEVILHKESALGDTIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAALTSSRDINW 185
Query: 204 DQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG 263
D QW +I DR FLSWLVKVP+E EQ R RQ++ AQI+KLEE+W++N A +D E
Sbjct: 186 DTSQWSAIIDDRQFLSWLVKVPSEAEQLRARQISLAQISKLEELWRENPNAKLEDAEAQS 245
Query: 264 VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 323
+E+ +LL+YED YQYQNI GPLVK+EADYDKR+KESQT+ ++T+RWD+GLN+K +A+
Sbjct: 246 GEEEMQPILLKYEDAYQYQNILGPLVKVEADYDKRMKESQTENDITIRWDMGLNQKRLAW 305
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 383
F + K + V+L + +LK + T +V ++ NK
Sbjct: 306 FCMPKLESGE----------VRLAVGDELKLKFAGTTSSVGIKGLQAFNKAGWG------ 349
Query: 384 TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGF 443
+ GD W G+G V+KIP+N DE+ LEL+ + G P + T GF
Sbjct: 350 SSGD------------------AVWEGVGSVVKIPNNASDEICLELRRNDGVPFDCTHGF 391
Query: 444 SVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 503
SVDFIWKSTSFDRMQ A++ FA+D++SVS YIYH+LLGH V+ + R +PK F+APNLP
Sbjct: 392 SVDFIWKSTSFDRMQAAMKTFAIDEKSVSGYIYHKLLGHEVEPQVLRTQMPKRFAAPNLP 451
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+AVD
Sbjct: 452 ELNHSQMSAVKAVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDH 511
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L EKIH+TGLKVVR+ AKSREA+DS V FL+LH+Q+ N + + EL+KL+QL+ + GELS
Sbjct: 512 LCEKIHQTGLKVVRLAAKSREALDSSVDFLSLHSQVANADTHHELQKLIQLRNDQGELSQ 571
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
+DE++Y+ L K EK +L+ ADVIC TCVGAGDPRL K KF ++LIDE+ Q+ EPECM+P
Sbjct: 572 SDERKYKALVKACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIP 631
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+++G KQ +LVGDH QLGPV+M KKAARAGLSQSLFERLV+LG P RL+VQYRMHP LS
Sbjct: 632 LVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHPIRLQVQYRMHPCLS 691
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
+F SN FYEG+LQNGV A ER +DFPWPV D PM F+ G EEI+ SGTS++NRTE
Sbjct: 692 EFSSNLFYEGTLQNGVTAPERLRKHVDFPWPVADTPMFFHQNLGTEEISSSGTSFLNRTE 751
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
ASNVEK+ T+F + G+ P QIGVITPYEGQR+++ +MQ GSL +Y+E+EVASVDAF
Sbjct: 752 ASNVEKMVTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAF 811
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW LL
Sbjct: 812 QGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLL 871
Query: 924 NFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+ YKE+ VEGPL+NL+ S++ FS+PK+
Sbjct: 872 SHYKEKGCFVEGPLSNLQPSMVQFSRPKK 900
>gi|389640681|ref|XP_003717973.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|351640526|gb|EHA48389.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|440471031|gb|ELQ40068.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae Y34]
gi|440490268|gb|ELQ69843.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae P131]
Length = 1105
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/866 (60%), Positives = 644/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC YCGIH PA V+ C CKKWFCN RG+TS SHIINHLVRA+HKEV LH +
Sbjct: 92 KELPEHACAYCGIHSPACVVKCLGCKKWFCNSRGNTSSSHIINHLVRARHKEVQLHPEST 151
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CGVRN+F+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W PL+ +
Sbjct: 152 LGDTILECYNCGVRNVFLLGFIPAKSDTVVVLLCRQPCAANPSSKDMSWDISRWSPLLDE 211
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLL 273
R+FLSWLV VPT+ EQ R R +T IAKLEE+WK++A AT DLEK +D++PH VLL
Sbjct: 212 RNFLSWLVAVPTDAEQLRARHLTPPMIAKLEELWKEDANATVDDLEKNEQIDDEPHPVLL 271
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 272 K--------------------YD-----------------------------------DP 276
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
Y YQNIFGPLVK+E+DYDK+LKE+Q+++ + VRWD GLN K +A F L K + GD++L
Sbjct: 277 YHYQNIFGPLVKMESDYDKKLKEAQSEDGLVVRWDYGLNNKHLASFILPKIESGDVKLAV 336
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y + W G+G+V+KIP+N DEV LEL+ S PTE T FS D++W
Sbjct: 337 GDEMRLKYKGELRPQWEGVGYVVKIPNNQSDEVTLELRKSGNDKSVPTECTHNFSADYVW 396
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQLA+R FAVD+ SVS YI+H+LLGH V R +PK F+AP LPDLN SQ
Sbjct: 397 KATSYDRMQLAMRNFAVDEMSVSGYIFHKLLGHEVAVAPMRTTMPKKFTAPGLPDLNGSQ 456
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ A+K + PLSLIQGPPGTGKTVTSATI+Y L K GS VLVCAPSN+AVDQL E++H
Sbjct: 457 ISAIKAVLSTPLSLIQGPPGTGKTVTSATIIYHLAKMNGSQVLVCAPSNVAVDQLCERVH 516
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLKVVR+ AKSRE ++S VSFLALH Q+R + N EL KL QLK E GELSS DEK++
Sbjct: 517 RTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDTNPELAKLQQLKSELGELSSQDEKKF 576
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L K AE+ +L NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 577 KQLTKAAEREILSNADVVCCTCVGAGDPRLAKLKFRNVLIDESTQSAEPECMIPLVLGCK 636
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV LG+ P RL VQYRMHP LS+FPSN
Sbjct: 637 QVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLGLTPIRLNVQYRMHPCLSEFPSNM 696
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEK
Sbjct: 697 FYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSNLGNEEISASGTSYLNRTEASNVEK 756
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
+ TRF + G+KP IGV+TPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD
Sbjct: 757 LVTRFFKAGVKPGDIGVVTPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKD 816
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSN+ QGIGFL+DPRRLNVALTRAKYG+++IGNPKVLSK LW++LL ++++
Sbjct: 817 FIVLSCVRSNESQGIGFLSDPRRLNVALTRAKYGVVIIGNPKVLSKHELWHHLLIHFRDR 876
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
K LV+GPL NL+ SL+ FSKPK F+
Sbjct: 877 KCLVDGPLTNLQASLLQFSKPKTPFR 902
>gi|440632949|gb|ELR02868.1| regulator-nonsense transcripts 1 [Geomyces destructans 20631-21]
Length = 1099
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/866 (59%), Positives = 642/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC YCGIH P+ V+ C C KWFC+ RG+ S SHI+NHLVRA+HKEV LH
Sbjct: 91 KELPAHACAYCGIHSPSSVVKCLGCTKWFCSARGNASSSHIVNHLVRARHKEVQLHPQST 150
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCA+ S KDM+WD +W+PLI D
Sbjct: 151 LGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCASTPSSKDMSWDISRWQPLIED 210
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV VP++ EQ R R +T IAKLEE+WKDNA AT DLEK G+D++P VLL
Sbjct: 211 RSFLPWLVAVPSDAEQLRARHLTPPMIAKLEEMWKDNAAATIADLEKAAGIDDEPAPVLL 270
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 271 K--------------------YD-----------------------------------DA 275
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+++ + +RWD GLN K +A F L K + GD++L
Sbjct: 276 YQYQNVFGPLVKIEADYDRKLKEAQSEDGLVIRWDYGLNNKHLASFVLPKIELGDVKLAV 335
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK---SSAGAPTEATTGFSVDFIW 449
GDE++L+Y + W G+G+V+KIP+N DEV +EL+ + PTE T FS D++W
Sbjct: 336 GDEMRLKYKGELRPVWEGVGYVVKIPNNQSDEVTIELRKIGNDKSVPTECTHNFSADYVW 395
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQLA++ FAVD+ SVS YI+H+LLGH V + +PK FS P LP+LN SQ
Sbjct: 396 KATSYDRMQLAMKTFAVDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNGSQ 455
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSAT++Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 456 INAVKSVLQKPLSLIQGPPGTGKTVTSATVIYHLSKVNGGQVLVCAPSNVAVDQLCERIH 515
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLKVVR+ AKSRE ++S V FL+LH Q+R + N EL KL QLK E GELSS DEK++
Sbjct: 516 RTGLKVVRLTAKSREDVESSVGFLSLHEQVRMNDSNLELTKLSQLKSELGELSSQDEKKF 575
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 576 KSLTRAAEREILNNADVICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCK 635
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG+ P RL VQYRMHP LS+FPSN
Sbjct: 636 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGLAPIRLNVQYRMHPCLSEFPSNM 695
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEK
Sbjct: 696 FYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFWSNLGNEEISASGTSYLNRTEASNVEK 755
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G++P IGVITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 756 IVTRFFKAGVQPADIGVITPYEGQRSYVVSSMQNTGTFKKENYKEIEVASVDAFQGREKD 815
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL +KE+
Sbjct: 816 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLQHFKER 875
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL NL+ SL+ FS+PK ++
Sbjct: 876 NCLVEGPLTNLQTSLLQFSRPKTTYR 901
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/869 (59%), Positives = 651/869 (74%), Gaps = 36/869 (4%)
Query: 84 EEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAK 143
+EE + N F E HAC YCGIH+P V+ C C KWFCN RG+TS SHI+NHLV+AK
Sbjct: 68 DEEIERNSF--GEGVEHACSYCGIHNPQCVVKCLHCNKWFCNSRGNTSASHIVNHLVKAK 125
Query: 144 HKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNW 203
HKEV LHK+ LG+T+ ECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S +D+NW
Sbjct: 126 HKEVILHKESALGDTIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAALTSSRDINW 185
Query: 204 DQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG 263
D QW +I DR FLSWLVKVP+E EQ R RQ++ AQI+KLEE+W++N A +D E
Sbjct: 186 DTSQWSAIIDDRQFLSWLVKVPSEAEQLRARQISLAQISKLEELWRENPNAKLEDAEAQS 245
Query: 264 VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 323
+E+ +LL+YED YQYQNI GPLVK+EADYDKR+KESQT+ ++T+RWD+GLN+K +A+
Sbjct: 246 GEEEMQPILLKYEDAYQYQNILGPLVKIEADYDKRMKESQTENDITIRWDMGLNQKRLAW 305
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 383
F + K + V+L + +LK + T +V ++ NK
Sbjct: 306 FCMPKLESGE----------VRLAVGDELKLKFAGTTNSVGIKGLQAFNKGGWG------ 349
Query: 384 TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGF 443
+ GD W G+G V+KIP+N DE+ LEL+ + G P + T GF
Sbjct: 350 SSGD------------------AVWEGVGSVVKIPNNASDEICLELRRNDGVPFDCTHGF 391
Query: 444 SVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 503
SVDFIWKSTSFDRMQ A++ FA+D++SVS YIYH+LLGH V+ + R +PK F+APNLP
Sbjct: 392 SVDFIWKSTSFDRMQAAMKTFAIDEKSVSGYIYHKLLGHEVEPQVLRTQMPKRFAAPNLP 451
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+AVD
Sbjct: 452 ELNHSQMSAVKAVLQKPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDH 511
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L EKIH+TGLKVVR+ AKSREA+DS V FL+LH+Q+ N + + EL+KL+QL+ + GELS
Sbjct: 512 LCEKIHQTGLKVVRLAAKSREALDSSVDFLSLHSQVANADTHHELQKLIQLRNDQGELSQ 571
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
+DE++Y+ L + EK +L+ ADVIC TCVGAGDPRL K KF ++LIDE+ Q+ EPECM+P
Sbjct: 572 SDERKYKALVRACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIP 631
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+++G KQ +LVGDH QLGPV+M KKAARAGLSQSLFERLV+LG P RL+VQYRMHP LS
Sbjct: 632 LVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHPIRLQVQYRMHPCLS 691
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
+F SN FYEG+LQNGV A ER +DFPWPV D PM F+ G EEI+ SGTS++NRTE
Sbjct: 692 EFSSNLFYEGTLQNGVTAPERLRKNVDFPWPVADTPMFFHQNLGTEEISSSGTSFLNRTE 751
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
ASNVEK+ T+F + G+ P QIGVITPYEGQR+++ +MQ GSL +Y+E+EVASVDAF
Sbjct: 752 ASNVEKMVTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGSLKKDLYKEVEVASVDAF 811
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD II+SCVRSN+HQGIGFLNDPRR+NVALTRAKYG++++GNPKVLSK PLW LL
Sbjct: 812 QGREKDYIILSCVRSNEHQGIGFLNDPRRMNVALTRAKYGVVILGNPKVLSKHPLWLYLL 871
Query: 924 NFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+ YKE+ VEGPL+NL+ S++ FS+PK+
Sbjct: 872 SHYKEKGCFVEGPLSNLQPSMVQFSRPKK 900
>gi|256082381|ref|XP_002577435.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662753|emb|CAZ33673.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1301
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/889 (58%), Positives = 667/889 (75%), Gaps = 64/889 (7%)
Query: 66 DNSN-LNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFC 124
D +N ++++S ++ +L F++E+ D + +LP HAC YCGIHDPA V+ CN KKWFC
Sbjct: 43 DGTNTIDVLSHRVADLDFKDEDQDDSSV---DLPEHACAYCGIHDPACVVFCNTTKKWFC 99
Query: 125 NGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV 184
NGRG+TSGSHIINHLVRA+ KEVTLHKDGPL +T+LECY CG +N+F+LGF+PAK++SVV
Sbjct: 100 NGRGNTSGSHIINHLVRARAKEVTLHKDGPLKDTLLECYVCGSKNVFLLGFVPAKSESVV 159
Query: 185 VLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
VLLCR CA N+ KDM WD QW+P+I R FL+WLVKVP++++Q + RQ+++ QI +L
Sbjct: 160 VLLCRNICA--NANKDMYWDPAQWQPIIQGRQFLAWLVKVPSDEQQAKARQISAQQINRL 217
Query: 245 EEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQT 304
EE+WK+N +A +DLEKPG D + + VLLRYE+ QY+++F PLV+LEADYDK++KES
Sbjct: 218 EEIWKENPQAAVEDLEKPGADNEVNPVLLRYENSQQYRDVFIPLVELEADYDKKIKESLK 277
Query: 305 QENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVT 364
ENV+VRW+ LNK+ +AYF + + GP
Sbjct: 278 LENVSVRWETALNKRRVAYFRIPGANE---------GP---------------------- 306
Query: 365 VRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDE 424
++R+M GDEL +R + G GHVIK+PDNF DE
Sbjct: 307 ----------------------ELRIMHGDELIIRQFNSPNDYLVGDGHVIKVPDNFSDE 344
Query: 425 VGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQS--VSAYIYHRLLGH 482
VGLE+K P E T + ++F WKST FDRM+ A+ D+Q + YI++RLLG
Sbjct: 345 VGLEMKQVIDTPLEPVT-YKIEFKWKSTPFDRMRRAI-SVVTDEQHGLLPPYIFYRLLGQ 402
Query: 483 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQ 542
+D+++ +C+LPK +SAP+LP+LN SQV+AVK +QRPLSLIQGPPGTGKTVTSA+IVY
Sbjct: 403 ELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQGPPGTGKTVTSASIVYH 462
Query: 543 LVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNM 602
L + VLV APSN AVDQL EKI RTGLKVVR+CA+SREA+ SPVS L LH Q +N+
Sbjct: 463 LNQIHQKKVLVVAPSNTAVDQLCEKIDRTGLKVVRLCARSREALASPVSRLMLHIQAQNV 522
Query: 603 EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
+ ++EL+KL QLK+ETGELS D+KRYR+LK+ E+ LL ADV+CCTCV AGD RL ++
Sbjct: 523 KGHTELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMAADVVCCTCVTAGDARLERL 582
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
FHS+LIDES QATEPEC++P+++G +Q++LVGDHCQLGPV+ CKKAA AGL+QSLFER
Sbjct: 583 SFHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCKKAASAGLTQSLFERF 642
Query: 723 VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
V+LGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A++R KIDFPWP PD+PM F
Sbjct: 643 VLLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDR-CKKIDFPWPNPDRPMFF 701
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
Y T GQEEI+G+G SY+NRTEA+ VEKI T+ ++ G+ P IGVITPYEGQRA+L ++
Sbjct: 702 YCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYLAHYLH 761
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
Y GSL AK+YQEIE+ASVDAFQGREKD II+SCVR+N++QGIGFLNDPRRLNVALTRA+Y
Sbjct: 762 YSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLNVALTRARY 821
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
G+IV+GNPK L KQPLWN LL+FY++Q +LVEGPLNNL E ++ F +PK
Sbjct: 822 GLIVVGNPKALCKQPLWNQLLHFYRDQHLLVEGPLNNLGEYMLQFPRPK 870
>gi|402085799|gb|EJT80697.1| regulator-nonsense transcripts 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1097
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/866 (60%), Positives = 644/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC YCGIH PA V+ C CKKWFCN RG+TS SHIINHLVRA+HKEV LH +
Sbjct: 93 KELPAHACAYCGIHSPACVVKCLGCKKWFCNSRGNTSSSHIINHLVRARHKEVQLHPEST 152
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CGVRN+F+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W PL+ +
Sbjct: 153 LGDTILECYNCGVRNVFLLGFIPAKSDTVVVLLCRQPCAANPSSKDMSWDISRWSPLLDE 212
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG-VDEDPHQVLL 273
R+FLSWLV VP++ EQ R R +T IAKLEE+WK++A AT QDLEK +D++PH VLL
Sbjct: 213 RNFLSWLVAVPSDAEQLRARHLTPPMIAKLEELWKEDANATVQDLEKNDQIDDEPHPVLL 272
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 273 K--------------------YD-----------------------------------DP 277
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
Y YQNIFGPLVK+E+DYDK+LKE+Q+++ + VRWD GLN K +A F L K + GD++L
Sbjct: 278 YHYQNIFGPLVKMESDYDKKLKEAQSEDGLVVRWDYGLNNKHLASFILPKIESGDVKLAV 337
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y + W G+G+V+KIP+N DEV LEL+ S PTE T FS D++W
Sbjct: 338 GDEMRLKYKGELRPQWEGVGYVVKIPNNQSDEVTLELRKSGNDKSVPTECTHNFSADYVW 397
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQLA+R FAVD+ SVS YI+H+LLGH V R +PK F+AP LP+LN SQ
Sbjct: 398 KATSYDRMQLAMRNFAVDEMSVSGYIFHKLLGHEVAVAPMRTTMPKKFTAPGLPELNGSQ 457
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ A+K + PLSLIQGPPGTGKTVTSATI+Y L K S VLVCAPSN+AVDQL E++H
Sbjct: 458 ISAIKAVLSTPLSLIQGPPGTGKTVTSATIIYHLAKMNNSQVLVCAPSNVAVDQLCERVH 517
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLKVVR+ AKSRE ++S VSFLALH Q+R + N EL KL QLK E GELSS DEK++
Sbjct: 518 RTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDTNPELAKLQQLKSELGELSSQDEKKF 577
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L K AE+ +L NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 578 KQLTKAAEREILGNADVVCCTCVGAGDPRLAKMKFRNVLIDESTQSAEPECMIPLVLGCK 637
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L + P RL VQYRMHP LS+FPSN
Sbjct: 638 QVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLNLTPIRLNVQYRMHPCLSEFPSNM 697
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEK
Sbjct: 698 FYEGSLQNGVTIQQRLRRDVDFPWPVGDMPMMFWSNLGNEEISASGTSYLNRTEASNVEK 757
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD
Sbjct: 758 IVTRFFKAGVKPGDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKD 817
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSN++QGIGFL+DPRRLNVALTRAKYG+++IGNPKVLSK LW++LL ++++
Sbjct: 818 FIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGVVIIGNPKVLSKHELWHHLLVHFRDR 877
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
K LV+GPL NL+ SL+ F +P+Q F+
Sbjct: 878 KCLVDGPLTNLQTSLLQFGRPRQSFR 903
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/896 (58%), Positives = 657/896 (73%), Gaps = 66/896 (7%)
Query: 70 LNLVSQKLHELQFEEE-EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNG 126
++ ++ + L FEE +DDG ++ + HACKYCGI +PA V+ CN+ C+KWFCN
Sbjct: 107 VDALAAGVGNLNFEETGDDDGFDYGKNDFTEHACKYCGISNPACVVRCNVASCRKWFCNS 166
Query: 127 RGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVL 186
RG+TSGSHI+NHLVRAKHKEV LH+D PLGET+LECY CG RN+F+LGFI AK DSVVVL
Sbjct: 167 RGNTSGSHIVNHLVRAKHKEVCLHRDSPLGETILECYNCGCRNVFLLGFISAKTDSVVVL 226
Query: 187 LCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEE 246
LCR PC N+LKDMNWD QW PLI DR FL WLVKVP+EQEQ R RQ+++ QI K+EE
Sbjct: 227 LCRDPCLNVNALKDMNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEE 286
Query: 247 VWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
+WK N +AT +DLEKPGVD++P V +YED YQYQN+F PL+KLEADYDK +KESQ++E
Sbjct: 287 LWKTNPDATLEDLEKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKE 346
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV-TV 365
N+TVRWD+GLNKK +AYF K + + + + G ++L D Q+ +V T
Sbjct: 347 NLTVRWDIGLNKKRVAYFVFPKEN----ELRLVPGDELRLRYSGDAVHPSWQSVGHVLTA 402
Query: 366 RWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEV 425
+ +V L ++R QG + + + + W
Sbjct: 403 QEEVAL---------------ELRANQGVPIDVNHGFSVDFVW----------------- 430
Query: 426 GLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 485
KSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+
Sbjct: 431 ------------------------KSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVE 466
Query: 486 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK 545
+ R LP+ F P LP+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + K
Sbjct: 467 AQMVRNTLPRRFGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAK 526
Query: 546 QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN 605
Q VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV +L LH Q+R+++ +
Sbjct: 527 QGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTS 586
Query: 606 --SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVICCTCVGA D RL +
Sbjct: 587 EKSELHKLQQLKDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFR 646
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F +LIDES QATEPEC++P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV
Sbjct: 647 FRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLV 706
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY 783
LGI+P RL+VQYRMHP LS+FPSN FYEG+LQNGV ER+ + IDFPWPVP++PM FY
Sbjct: 707 TLGIKPIRLQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFY 766
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQY 843
V GQEEI+ SGTSY+NRTEA+NVEK+ T F++ G+ P QIGVITPYEGQRA++V +M
Sbjct: 767 VQLGQEEISASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMAR 826
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
GSL ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YG
Sbjct: 827 NGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYG 886
Query: 904 IIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
I+++GNPKVLSKQPLWN LL YKE + LVEGPLNNLK+S++ F KP++ + +
Sbjct: 887 IVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRKIYNDRRL 942
>gi|296816783|ref|XP_002848728.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
gi|238839181|gb|EEQ28843.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
Length = 1088
Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/866 (60%), Positives = 639/866 (73%), Gaps = 68/866 (7%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC + V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH
Sbjct: 82 KELPAHAC--------SSVVKCLTCNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASS 133
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PL+ D
Sbjct: 134 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLMED 193
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WK+NA AT +DLEK GVD++P VLL
Sbjct: 194 RSFLPWLVSAPSDQEQLRARHLSPQMIAKLEELWKENATATVEDLEKATGVDDEPAPVLL 253
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 254 R--------------------YD-----------------------------------DA 258
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ ++VRWD+GLN K +A F L K + GD++L
Sbjct: 259 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLSVRWDLGLNNKHLASFVLPKLELGDVKLAV 318
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL+S PTE + F+ D++W
Sbjct: 319 GDEMRLKYAGELRSKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVW 378
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FAVD+ SVS Y++HRLLG+ V + +PK FS P LP LN SQ
Sbjct: 379 KATSFDRMQLAMKTFAVDEMSVSGYLFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQ 438
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K VLVCAPSN+AVDQL E IH
Sbjct: 439 INAVKAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIH 498
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV L+LH Q+RN + N EL KL QLK E GELSS DEK+Y
Sbjct: 499 RTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELVKLNQLKAELGELSSQDEKKY 558
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 559 KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCK 618
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q +LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+F SN
Sbjct: 619 QAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNM 678
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +++R L +DFPWPV DKPM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 679 FYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEK 738
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 739 IVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGTFKKESYKEIEVASVDAFQGREKD 798
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KEQ
Sbjct: 799 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQ 858
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SLI FS+PKQ ++
Sbjct: 859 NCLVEGPLSNLQTSLIQFSRPKQAYR 884
>gi|315049715|ref|XP_003174232.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
gi|311342199|gb|EFR01402.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
Length = 1094
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/866 (60%), Positives = 637/866 (73%), Gaps = 68/866 (7%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH
Sbjct: 88 KELPAHAC--------GSVVKCLTCNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASS 139
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PL+ D
Sbjct: 140 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLMED 199
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WK+NA AT +DLEK VD++P VLL
Sbjct: 200 RSFLPWLVSAPSDQEQLRARHLSPQMIAKLEELWKENASATVEDLEKATNVDDEPAPVLL 259
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 260 R--------------------YD-----------------------------------DA 264
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ +TVRWD+GLN K +A F L K + GD++L
Sbjct: 265 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLTVRWDLGLNNKHLASFVLPKLELGDVKLAV 324
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL+S PTE + F+ D++W
Sbjct: 325 GDEMRLKYAGELRPKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVW 384
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS P LP LN SQ
Sbjct: 385 KATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQ 444
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K VLVCAPSN+AVDQL E IH
Sbjct: 445 INAVKAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIH 504
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV L+LH Q+RN + N EL KL QLK E GELSS DEK+Y
Sbjct: 505 RTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELVKLNQLKTELGELSSQDEKKY 564
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 565 KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCK 624
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q +LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+F SN
Sbjct: 625 QAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNM 684
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +++R L +DFPWPV DKPM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 685 FYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEK 744
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 745 IVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKD 804
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KEQ
Sbjct: 805 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQ 864
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SLI FS+PKQ ++
Sbjct: 865 NCLVEGPLSNLQTSLIQFSRPKQAYR 890
>gi|154305574|ref|XP_001553189.1| hypothetical protein BC1G_08556 [Botryotinia fuckeliana B05.10]
gi|347828532|emb|CCD44229.1| similar to regulator of nonsense transcripts 1 [Botryotinia
fuckeliana]
Length = 1100
Score = 1090 bits (2819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/866 (59%), Positives = 640/866 (73%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC YCGIH P+ V+ C C KWFC+ RG+ + SHI+NHLVRA+HKEV LH
Sbjct: 92 KELPAHACAYCGIHSPSCVVKCLGCNKWFCSARGNATSSHIVNHLVRARHKEVQLHPMST 151
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG++N+F+LGFIPAK+D+VVVLLCR PCA+ S KDM+WD +W+PLI D
Sbjct: 152 LGDTVLECYNCGIKNVFLLGFIPAKSDTVVVLLCRQPCASAPSSKDMSWDVSKWQPLIED 211
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFLSWLV +PT+ EQ R R +T IAKLEE+WKDN AT DLEK G+D+DP VLL
Sbjct: 212 RSFLSWLVSLPTDAEQLRARHLTPPMIAKLEEMWKDNVNATLSDLEKAAGIDDDPAPVLL 271
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 272 K--------------------YD-----------------------------------DA 276
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+++ + +RWD GLN K +A F L K + GD++L
Sbjct: 277 YQYQNVFGPLVKIEADYDRKLKEAQSEDGLIIRWDYGLNNKHLASFILPKIELGDVKLAV 336
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK---SSAGAPTEATTGFSVDFIW 449
GDE++L+Y + W G+G+V+KIP+N DEV +EL+ + PTE T FS D++W
Sbjct: 337 GDEMRLKYKGELRPVWEGVGYVVKIPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVW 396
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQ A++ FAVD+ SVS YI+H+LLGH V + +PK FS P LP+LN SQ
Sbjct: 397 KATSYDRMQFAMKTFAVDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNSSQ 456
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSAT++Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 457 ISAVKSVLQKPLSLIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIH 516
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RT LKVVR+ AKSRE ++S V FL+LH Q+R + N EL KL QLK E GELSS DEK++
Sbjct: 517 RTQLKVVRLTAKSREDVESSVGFLSLHEQVRMNDSNHELAKLTQLKSELGELSSQDEKKF 576
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 577 KALTRAAEREILSNADVICCTCVGAGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCK 636
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV LG+ P RL VQYRMHP LS+FPSN
Sbjct: 637 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVHLGLNPIRLNVQYRMHPCLSEFPSNM 696
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FY+GSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEK
Sbjct: 697 FYDGSLQNGVTMQQRLRRDVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEASNVEK 756
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G++P IGVITPYEGQR+++V MQ GS + Y+E+EVASVDAFQGREKD
Sbjct: 757 IVTRFFKAGVQPGDIGVITPYEGQRSYVVTSMQNAGSFKKEHYKEVEVASVDAFQGREKD 816
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL +K++
Sbjct: 817 FIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIVGNPKVLSKHPLWHYLLQHFKDR 876
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ FS+PK ++
Sbjct: 877 SCLVEGPLSNLQTSLLQFSRPKTTYR 902
>gi|241598902|ref|XP_002404932.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
gi|215502402|gb|EEC11896.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
Length = 1122
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/642 (80%), Positives = 580/642 (90%), Gaps = 2/642 (0%)
Query: 319 KSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 378
+S + F+ + DGYQYQNIFGPLVK+EADYDK+LKESQTQ+N+ VRWD+GLNKK IAY
Sbjct: 265 ESCSPFASVRRYEDGYQYQNIFGPLVKMEADYDKKLKESQTQDNIEVRWDIGLNKKMIAY 324
Query: 379 FSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTE 438
F++AK+D DMRLM GDEL+LRY + K WSG+GHVIKIPDN+ +EVG+E+K++ G P+E
Sbjct: 325 FTVAKSDTDMRLMHGDELRLRYLGELHKPWSGVGHVIKIPDNYSEEVGIEMKTNLGVPSE 384
Query: 439 ATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFS 498
T+ F VDF+WKSTSFDRMQ ALRKFAVD+ SVSAYIYH+LLGH V++V+ RC LPKHFS
Sbjct: 385 CTSNFVVDFVWKSTSFDRMQAALRKFAVDECSVSAYIYHKLLGHEVEDVVMRCQLPKHFS 444
Query: 499 APNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
APNLP+LNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTS TIVY LVKQ+ PVLVCAPSN
Sbjct: 445 APNLPELNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSGTIVYHLVKQSNGPVLVCAPSN 504
Query: 559 IAVDQLTEKIHRTGLK--VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
IAVDQLTEKIH+T LK VVR+CAKSREAI+SPVSFLALHNQIRNME +SEL KL QLK+
Sbjct: 505 IAVDQLTEKIHQTSLKAGVVRLCAKSREAINSPVSFLALHNQIRNMEGHSELHKLQQLKD 564
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
ETGELSSADEKRYRMLKK E+ LL+ ADVICCTCVGAGDPRL + KFHSILIDESMQAT
Sbjct: 565 ETGELSSADEKRYRMLKKACERELLEAADVICCTCVGAGDPRLARFKFHSILIDESMQAT 624
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQY 736
EPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP RLEVQY
Sbjct: 625 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPLRLEVQY 684
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGT 796
RMHP+LSKFPSNFFYEGSLQNGV ADER++ +DFPWP PDKPMLFY QGQEE+AGSGT
Sbjct: 685 RMHPQLSKFPSNFFYEGSLQNGVFADERRMKGVDFPWPQPDKPMLFYACQGQEEMAGSGT 744
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
SY+NRTEA+ VEKI TRF+R +KP+QIG+ITPYEGQRA+LVQHMQ+QG+L AK+YQEIE
Sbjct: 745 SYLNRTEAALVEKIATRFLRSAVKPQQIGIITPYEGQRAYLVQHMQFQGALHAKLYQEIE 804
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
VASVDAFQGREKDLI+MSCVRSN+HQGIGFLNDPRRLNVALTRA+YGII++GNPKVLSKQ
Sbjct: 805 VASVDAFQGREKDLIVMSCVRSNEHQGIGFLNDPRRLNVALTRARYGIIIVGNPKVLSKQ 864
Query: 917 PLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
PLWN+LL+FYKE +VLVEGPLNNLKESLI FSKP++ N
Sbjct: 865 PLWNHLLSFYKENRVLVEGPLNNLKESLIQFSKPRKLINTVN 906
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/337 (69%), Positives = 273/337 (81%), Gaps = 9/337 (2%)
Query: 1 MSVDAYGPSSQTLTFLDTEE-TDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSV-NQIQ 58
MSVDAYGPSSQTLTFLDTEE TDL+G DTQGSEFDFTDFTLPSQ TQASQ+D Q
Sbjct: 1 MSVDAYGPSSQTLTFLDTEEATDLLGADTQGSEFDFTDFTLPSQ--TQASQVDGAQTQGG 58
Query: 59 VNGKQNLDNSNLNLVS---QKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIM 115
G Q + L+ V+ Q L EL FEE+E+D ++++K+LP HACKYCGIHDP V+
Sbjct: 59 SRGGQVSLGNGLDAVAATGQVLGELTFEEDEED--QYYSKDLPDHACKYCGIHDPGCVVQ 116
Query: 116 CNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGF 175
CN+CK+WFCNGRG+TSGSH++NHLVRAKHKEVTLH+DGPLGETVLECY+C RN+FVLGF
Sbjct: 117 CNVCKRWFCNGRGNTSGSHMVNHLVRAKHKEVTLHRDGPLGETVLECYSCACRNVFVLGF 176
Query: 176 IPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQ 235
IPAKADSVVVLLCR PCAAQ+SLKDMNWD +QWKPLI DR FL WLV+ P E++Q R RQ
Sbjct: 177 IPAKADSVVVLLCRHPCAAQSSLKDMNWDPDQWKPLIHDRCFLPWLVRAPHERDQLRARQ 236
Query: 236 VTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADY 295
VT+ QI++LEE+WK + QD P P + RYEDGYQYQNIFGPLVK+EADY
Sbjct: 237 VTAQQISRLEELWKKSILFAVQDTVCPVESCSPFASVRRYEDGYQYQNIFGPLVKMEADY 296
Query: 296 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
DK+LKESQTQ+N+ VRWD+GLNKK IAYF++AK+D D
Sbjct: 297 DKKLKESQTQDNIEVRWDIGLNKKMIAYFTVAKSDTD 333
>gi|396485880|ref|XP_003842280.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
gi|312218856|emb|CBX98801.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
Length = 1080
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/865 (60%), Positives = 636/865 (73%), Gaps = 60/865 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELP HAC YCGIH+ V+ C C KWFC+ RG++S SHIINHLVRA+HKEV LH L
Sbjct: 81 ELPSHACAYCGIHNAGSVVKCLACSKWFCSARGNSSSSHIINHLVRARHKEVQLHPASSL 140
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DR
Sbjct: 141 GDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSQKDMNWDTSRWQPLIEDR 200
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
SFL WLV PT+QEQ R R ++ IAKLEE+WKDN AT DLEK G +E +VLLR
Sbjct: 201 SFLPWLVPAPTDQEQLRARHLSPQTIAKLEELWKDNQNATIADLEKGAGQEEVIAKVLLR 260
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D +
Sbjct: 261 --------------------YD-----------------------------------DAF 265
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKESQ+Q+N+ VRWD+ LN K A F L K + GD++L G
Sbjct: 266 QYQNVFGPLVKIEADYDRKLKESQSQDNLVVRWDMALNNKHTASFILPKLELGDVKLAVG 325
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE++LRY+ + W G+G+VIKIP+N DEV +EL++ PTE T FS D++WK
Sbjct: 326 DEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFSADYVWK 385
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + +P+ FS P LP+LN SQ+
Sbjct: 386 ATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVASAPMKISIPRKFSVPGLPELNASQI 445
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K +GS VLVCAPSN+AVDQL E+IH
Sbjct: 446 NAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLCKISGSQVLVCAPSNVAVDQLCERIHL 505
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK + GELSS DEK+++
Sbjct: 506 TGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELNKLNQLKSDVGELSSQDEKKFK 565
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + AE+ +L+ ADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 566 QLTRAAEREILNAADVICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQ 625
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA AGL+QSLFERLV+LG P RL+VQYRMHP LS+FPSN F
Sbjct: 626 VVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVILGCSPIRLQVQYRMHPCLSEFPSNMF 685
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA NVEKI
Sbjct: 686 YEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSNLGVEEISASGTSYLNRTEAQNVEKI 745
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G++P IG+ITPYEGQR+++V MQ GS + Y+E+EVASVDAFQGREKD
Sbjct: 746 VTRFFKAGVQPSDIGIITPYEGQRSYVVSSMQATGSFKKENYKEVEVASVDAFQGREKDF 805
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL +KE+
Sbjct: 806 IILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERN 865
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL NL+ SL+ FS+PKQ ++
Sbjct: 866 CLVEGPLTNLQVSLLQFSRPKQTYR 890
>gi|327293656|ref|XP_003231524.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326466152|gb|EGD91605.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1093
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/866 (60%), Positives = 637/866 (73%), Gaps = 69/866 (7%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH
Sbjct: 88 KELPAHACG---------VVKCLTCNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASS 138
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PL+ D
Sbjct: 139 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTPRWQPLMED 198
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WK+NA AT +DLEK VD++P VLL
Sbjct: 199 RSFLPWLVSAPSDQEQLRARHLSPQMIAKLEELWKENASATVEDLEKATNVDDEPAPVLL 258
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 259 R--------------------YD-----------------------------------DA 263
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ +TVRWD+GLN K +A F L K + GD++L
Sbjct: 264 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLTVRWDLGLNNKHLASFVLPKLELGDVKLAV 323
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL+S PTE + F+ D++W
Sbjct: 324 GDEMRLKYAGELRPKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVW 383
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS P LP LN SQ
Sbjct: 384 KATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQ 443
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K VLVCAPSN+AVDQL E IH
Sbjct: 444 INAVKAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIH 503
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV L+LH Q+RN + N EL KL QLK E GELSS DEK+Y
Sbjct: 504 RTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELVKLNQLKTELGELSSQDEKKY 563
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 564 KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCK 623
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q +LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+F SN
Sbjct: 624 QAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNM 683
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +++R L +DFPWPV DKPM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 684 FYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEK 743
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 744 IVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKD 803
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KEQ
Sbjct: 804 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQ 863
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SLI FS+PKQ ++
Sbjct: 864 NCLVEGPLSNLQTSLIQFSRPKQAYR 889
>gi|320592037|gb|EFX04476.1| regulator of nonsense [Grosmannia clavigera kw1407]
Length = 1095
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/909 (57%), Positives = 651/909 (71%), Gaps = 81/909 (8%)
Query: 52 DSVNQIQVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPA 111
+S+ + V+G Q L +L EEEE KELP HAC YCGIH PA
Sbjct: 72 ESLASVPVDGVQGL-------------KLGAEEEE--------KELPAHACAYCGIHSPA 110
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+ C C KWFC+ RG+ + SHI+NHLVRA+HKEV LH LG+TVLECY CG +N+F
Sbjct: 111 SVVKCLACNKWFCSARGNATSSHIVNHLVRARHKEVQLHPQSSLGDTVLECYNCGTKNVF 170
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W+PLI DRSFL WLV PT+ EQ
Sbjct: 171 LLGFIPAKSDTVVVLLCRQPCAASTSSKDMSWDISRWQPLIEDRSFLPWLVATPTDAEQL 230
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG-VDEDPHQVLLRYEDGYQYQNIFGPLVK 290
R R +T IA+LEE+WKDNA AT QDLE+ VD+DP VLL+
Sbjct: 231 RARHLTPPMIARLEEMWKDNANATVQDLERAASVDDDPQPVLLK---------------- 274
Query: 291 LEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADY 350
YD D Y YQNIFGPLVK+E+DY
Sbjct: 275 ----YD-----------------------------------DPYHYQNIFGPLVKMESDY 295
Query: 351 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWS 409
DK+LKE+Q+++N+ +RWD GLN K +A F L K + GD++L GDE++L+Y + W
Sbjct: 296 DKKLKEAQSEDNLVIRWDYGLNNKHLAIFILPKIESGDVKLAVGDEMRLKYKGELRPPWE 355
Query: 410 GLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAV 466
G+G+VIKIP+N DEV LEL+ + PTE T FS D++WK+TS+DRMQ+A++ FAV
Sbjct: 356 GVGYVIKIPNNQSDEVKLELRKTGNDKSVPTECTHNFSADYVWKATSYDRMQIAMKTFAV 415
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 526
D+ SVS YI+H+LLGH V + LPK F+AP LP+LN SQ+ A+K + PLSLIQG
Sbjct: 416 DEMSVSGYIFHKLLGHEVAVAPMKTSLPKKFTAPQLPELNGSQISAIKAVLSTPLSLIQG 475
Query: 527 PPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAI 586
PPGTGKTVTSATI+Y L K S VLVCAPSN+AVDQL E++HRTGLKVVR+ AKSRE +
Sbjct: 476 PPGTGKTVTSATIIYHLAKMNNSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDV 535
Query: 587 DSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADV 646
+S VSFLALH Q+R + N EL +L LK E GELSS DEK+++ L K AEK +L+NADV
Sbjct: 536 ESSVSFLALHEQVRMNDTNVELTRLQLLKNEVGELSSLDEKKFKQLTKAAEKEILNNADV 595
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M
Sbjct: 596 VCCTCVGAGDPRLAKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMN 655
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
KKAA+AGL+QSLFERLV LG P RL VQYRMHP L+ FPSN FYEGSLQNGV ER
Sbjct: 656 KKAAKAGLNQSLFERLVKLGFAPIRLNVQYRMHPHLAAFPSNMFYEGSLQNGVTIQERLR 715
Query: 767 SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
+DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEK+ TRF + G+KP IGV
Sbjct: 716 KDVDFPWPVVDTPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPADIGV 775
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD I++SCVRSN++QGIGF
Sbjct: 776 ITPYEGQRSYIVTTMQNTGTFKKESYKEVEVASVDAFQGREKDYIVLSCVRSNENQGIGF 835
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
L+DPRRLNVALTRAKYGI+++GNPKVL+K LW +LL +K+ K LVEGPL+NL+ SL
Sbjct: 836 LSDPRRLNVALTRAKYGIVILGNPKVLAKHELWYHLLVHFKDHKCLVEGPLSNLQPSLHQ 895
Query: 947 FSKPKQYFK 955
FS+PK ++
Sbjct: 896 FSRPKHSYR 904
>gi|326479319|gb|EGE03329.1| hypothetical protein TEQG_02362 [Trichophyton equinum CBS 127.97]
Length = 1093
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/866 (60%), Positives = 636/866 (73%), Gaps = 69/866 (7%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH
Sbjct: 88 KELPAHACG---------VVKCLTCNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASS 138
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PL+ D
Sbjct: 139 LGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLMED 198
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV P++QEQ R R ++ IAKLEE+WK+NA AT +DLEK VD++P VLL
Sbjct: 199 RSFLPWLVSAPSDQEQLRARHLSPQMIAKLEELWKENASATVEDLEKATNVDDEPAPVLL 258
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
R YD D
Sbjct: 259 R--------------------YD-----------------------------------DA 263
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 264 YQYQNVFGPLVKIEADYDRKLKEAQSQDGLAVRWDLGLNNKHLASFVLPKLELGDVKLAV 323
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL+S PTE + F+ D++W
Sbjct: 324 GDEMRLKYAGELRPKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEISHNFTADYVW 383
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS P LP LN SQ
Sbjct: 384 KATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQ 443
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K VLVCAPSN+AVDQL E IH
Sbjct: 444 INAVKAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVLVCAPSNVAVDQLCECIH 503
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLK VRV AKSRE ++SPV L+LH Q+RN + N EL KL QLK E GELSS DEK+Y
Sbjct: 504 RTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELVKLNQLKTELGELSSQDEKKY 563
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 564 KQLTRAAEKEILTNADVICCTCVGAGDPRLAKSKFRTVLIDESTQSAEPECMIPLVLGCK 623
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q +LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+F SN
Sbjct: 624 QAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCLSQFSSNM 683
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +++R L +DFPWPV DKPM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 684 FYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNLGNEEISASGTSYLNRTEAANVEK 743
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 744 IVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGTFKKEWYKEIEVASVDAFQGREKD 803
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +KEQ
Sbjct: 804 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYLLRHFKEQ 863
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SLI FS+PKQ ++
Sbjct: 864 NCLVEGPLSNLQTSLIQFSRPKQAYR 889
>gi|429860740|gb|ELA35464.1| ATP-dependent helicase nam7 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1088
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/868 (59%), Positives = 640/868 (73%), Gaps = 60/868 (6%)
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
++ELPPHAC YCGIH P+ V+ C C KWFC+ RG+ + SHI+NHLVRA+HKEV LH +
Sbjct: 88 DRELPPHACAYCGIHSPSSVVKCLGCNKWFCSARGNATSSHIVNHLVRARHKEVQLHPES 147
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W+PLI
Sbjct: 148 TLGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAANTSSKDMSWDTSRWQPLIE 207
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVL 272
+R+FL+WLV P++ EQ R R +T IAKLEE+WKDN+ AT DLEK +D+DPH VL
Sbjct: 208 ERAFLTWLVATPSDAEQLRARHLTPPMIAKLEEMWKDNSTATVADLEKANSIDDDPHPVL 267
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
L+ YD D
Sbjct: 268 LK--------------------YD-----------------------------------D 272
Query: 333 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLM 391
Y YQNIFGPLVK+E+DYDK+LKE+Q+++ +TVRWD GLN K + F L K + GD++L
Sbjct: 273 PYHYQNIFGPLVKMESDYDKKLKEAQSEDGLTVRWDYGLNNKHLVSFELHKIESGDVKLA 332
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG---APTEATTGFSVDFI 448
GDE++LRY + W G+G+VIKIP+N DEV LEL+ + PTE T FS D++
Sbjct: 333 VGDEMRLRYKGELRPAWEGVGYVIKIPNNQSDEVTLELRKAGNEKTVPTECTHNFSADYV 392
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 508
WK+TS+DRMQ A++ FAVDD SVS YI+H+LLGH+V + +PK FS P LPDLN S
Sbjct: 393 WKATSYDRMQYAMKTFAVDDMSVSGYIFHKLLGHDVAVAPQKTTMPKKFSVPGLPDLNTS 452
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
Q+ A+K + PLSLIQGPPGTGKTVTSATI+Y L K VLVCAPSN+AVDQL E+I
Sbjct: 453 QIAAIKAVLSTPLSLIQGPPGTGKTVTSATIIYHLCKMNNGQVLVCAPSNVAVDQLCERI 512
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR 628
HRTGLKVVR+ AKSRE ++S VSFLALH Q+R + N EL KL QLK E GELSS DEK+
Sbjct: 513 HRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDSNGELVKLAQLKSELGELSSQDEKK 572
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
++ L K AE+ +L NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG
Sbjct: 573 FKQLTKAAERDILHNADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGC 632
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L + P RL +QYRMHP LS+FPSN
Sbjct: 633 KQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNLRLVPIRLNIQYRMHPCLSEFPSN 692
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FY+GSLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVE
Sbjct: 693 MFYDGSLQNGVTHRERLRRDVDFPWPVADMPMMFWSNLGNEEISASGTSYLNRTEASNVE 752
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
K+ TRF + G+KP IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREK
Sbjct: 753 KVVTRFFKAGVKPGDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREK 812
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D I++SCVRSND+QGIGFL+DPRRLNVALTRAKYG+++IGNPKVLSK LW++LL +KE
Sbjct: 813 DFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKE 872
Query: 929 QKVLVEGPLNNLKESLILFSKPKQYFKK 956
+K LVEGPL NL+ SL+ F KP+ +++
Sbjct: 873 RKCLVEGPLTNLQTSLLQFGKPRTAYRQ 900
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/865 (59%), Positives = 636/865 (73%), Gaps = 60/865 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELP HAC YCGIH+ V+ C C KWFC+ RG++S SHIINHLVRA+HKEV LH L
Sbjct: 82 ELPAHACAYCGIHNAGSVVKCLACTKWFCSARGNSSSSHIINHLVRARHKEVQLHPASSL 141
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCA+ S KDMNWD +W+PLI DR
Sbjct: 142 GDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCASMPSQKDMNWDTSRWQPLIEDR 201
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
SFL WLV PT+QEQ R R ++ IAKLEE+WKDNA AT DLEK G +E +VLLR
Sbjct: 202 SFLPWLVPAPTDQEQLRARHLSPQTIAKLEELWKDNANATIADLEKGAGQEEVIAKVLLR 261
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D +
Sbjct: 262 --------------------YD-----------------------------------DAF 266
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKESQ+Q+N+ VRWD+ LN K A F L K + GD++L G
Sbjct: 267 QYQNVFGPLVKIEADYDRKLKESQSQDNLVVRWDMALNNKHTASFILPKLELGDVKLAVG 326
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE++LRY+ + W G+G+VIKIP+N DEV +EL++ PTE T FS D++WK
Sbjct: 327 DEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFSADYVWK 386
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + +P+ FS P LP+LN SQ+
Sbjct: 387 ATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVASAPMKIQIPRKFSVPGLPELNGSQI 446
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K + S VLVCAPSN+AVDQL E+IH
Sbjct: 447 NAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLCKISASQVLVCAPSNVAVDQLCERIHL 506
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK + GELSS DEK+++
Sbjct: 507 TGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELNKLNQLKSDVGELSSQDEKKFK 566
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + AE+ +L+ ADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 567 QLTRAAEREILNAADVICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQ 626
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA AGL+QSLFERLV+LG P RL+VQYRMHP LS+FPSN F
Sbjct: 627 VVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVILGCSPIRLQVQYRMHPCLSEFPSNMF 686
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA NVEKI
Sbjct: 687 YEGSLQNGVTMQERIRRDVDFPWPVADSPMMFWSNLGAEEISASGTSYLNRTEAQNVEKI 746
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G++P IG+ITPYEGQR+++V MQ GS + Y+++EVASVDAFQGREKD
Sbjct: 747 VTRFFKAGVQPGDIGIITPYEGQRSYVVSSMQATGSFKKENYKDVEVASVDAFQGREKDF 806
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL +KE+
Sbjct: 807 IILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERN 866
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL NL+ SL+ FS+PKQ ++
Sbjct: 867 CLVEGPLTNLQVSLLQFSRPKQTYR 891
>gi|310800151|gb|EFQ35044.1| RNA helicase [Glomerella graminicola M1.001]
Length = 1086
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/868 (59%), Positives = 640/868 (73%), Gaps = 60/868 (6%)
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
++ELPPHAC YCGIH P+ V+ C C KWFC+ R + S SHI+NHLVRA+HKEV LH +
Sbjct: 88 DRELPPHACAYCGIHSPSSVVKCLGCNKWFCSARSNASSSHIVNHLVRARHKEVQLHPES 147
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W+PLI
Sbjct: 148 TLGDTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAANTSSKDMSWDTSRWQPLIE 207
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG-VDEDPHQVL 272
+R+FL+WLV P++ EQ R R +T IAKLEE+WK+NA AT DLEK +D+DPH VL
Sbjct: 208 ERAFLTWLVATPSDAEQLRARHLTPPMIAKLEEMWKENATATVADLEKAASIDDDPHPVL 267
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
L+ YD D
Sbjct: 268 LK--------------------YD-----------------------------------D 272
Query: 333 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLM 391
Y YQNIFGPLVK+E+DYDK+LKE+Q+++ +TVRWD GLN K + F L K + GD++L
Sbjct: 273 PYHYQNIFGPLVKMESDYDKKLKEAQSEDGLTVRWDYGLNNKHLVSFELHKIESGDVKLA 332
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG---APTEATTGFSVDFI 448
GDE++LRY + TW G+G+VIKIP+N DEV LEL+ + PTE T FS D++
Sbjct: 333 VGDEMRLRYKGELRPTWEGVGYVIKIPNNQSDEVTLELRKAGNEKTVPTECTHNFSADYV 392
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 508
WK+TS+DRMQ A++ FAVDD SVS YI+H+LLGH+V + +PK +S P LPDLN S
Sbjct: 393 WKATSYDRMQYAMKTFAVDDMSVSGYIFHKLLGHDVAVAPMKTTMPKKYSVPGLPDLNTS 452
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
Q+ A+K + PLSLIQGPPGTGKTVTSATI+Y L K VLVCAPSN+AVDQL E+I
Sbjct: 453 QIAAIKAVLSTPLSLIQGPPGTGKTVTSATIIYHLCKMNNGQVLVCAPSNVAVDQLCERI 512
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR 628
HRTGLKVVR+ AKSRE ++S VSFLALH Q+R + N EL KL QLK E GELSS DEK+
Sbjct: 513 HRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDSNGELVKLAQLKSELGELSSQDEKK 572
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
++ L K AE+ +L NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG
Sbjct: 573 FKQLTKAAERDILHNADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGC 632
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L + P RL +QYRMHP LS+FPSN
Sbjct: 633 KQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNLRLVPIRLNIQYRMHPCLSEFPSN 692
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FY+GSLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVE
Sbjct: 693 MFYDGSLQNGVTVRERVRRDVDFPWPVVDMPMMFWSNLGNEEISASGTSYLNRTEASNVE 752
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
K+ TRF + G+KP IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREK
Sbjct: 753 KVVTRFFKAGVKPLDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREK 812
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D I++SCVRSND+QGIGFL+DPRRLNVALTRAKYG+++IGNPKVLSK LW++LL +K+
Sbjct: 813 DFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKD 872
Query: 929 QKVLVEGPLNNLKESLILFSKPKQYFKK 956
+K LVEGPL NL+ SL+ F KP+ +++
Sbjct: 873 RKCLVEGPLTNLQTSLLQFGKPRTAYRQ 900
>gi|189207819|ref|XP_001940243.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976336|gb|EDU42962.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1079
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/865 (60%), Positives = 635/865 (73%), Gaps = 60/865 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELP HAC YCGIH+ V+ C C KWFC+ RG++S SHIINHLVRA+HKEV LH L
Sbjct: 81 ELPAHACAYCGIHNAGSVVKCLACSKWFCSARGNSSSSHIINHLVRARHKEVQLHPASSL 140
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DR
Sbjct: 141 GDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSQKDMNWDTSRWQPLIEDR 200
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
SFL WLV PT+QEQ R R ++ IAKLEE+WKDNA AT DLEK G +E +VLLR
Sbjct: 201 SFLPWLVPAPTDQEQLRARHLSPQTIAKLEELWKDNANATIADLEKGAGQEEVIAKVLLR 260
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D +
Sbjct: 261 --------------------YD-----------------------------------DAF 265
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKESQ+Q+N+ VRWD+ LN K A F L K + GD++L G
Sbjct: 266 QYQNVFGPLVKIEADYDRKLKESQSQDNLIVRWDMALNNKHTASFILPKLELGDVKLAVG 325
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE++LRY+ + W G+G+VIKIP+N DEV +EL++ PTE T FS D++WK
Sbjct: 326 DEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFSADYVWK 385
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + +P+ FS P LP+LN SQ+
Sbjct: 386 ATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKIQIPRKFSVPGLPELNASQI 445
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K + S VLVCAPSN+AVDQL E+IH
Sbjct: 446 NAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLCKISQSQVLVCAPSNVAVDQLCERIHL 505
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK + GELSS DEK+++
Sbjct: 506 TGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELNKLNQLKSDVGELSSQDEKKFK 565
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + AE+ +L ADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 566 QLTRAAEREILMAADVICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQ 625
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA AGL+QSLFERLV+LG P RL+VQYRMHP LS+FPSN F
Sbjct: 626 VVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVILGCSPIRLQVQYRMHPCLSEFPSNMF 685
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA NVEKI
Sbjct: 686 YEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSNLGAEEISASGTSYLNRTEAQNVEKI 745
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G++P IG+ITPYEGQR+++V MQ GS + Y+E+EVASVDAFQGREKD
Sbjct: 746 VTRFFKAGVQPGDIGIITPYEGQRSYVVSSMQATGSFKKENYKEVEVASVDAFQGREKDF 805
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL +KE+
Sbjct: 806 IILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERN 865
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL NL+ SL+ FS+PKQ ++
Sbjct: 866 CLVEGPLTNLQVSLLQFSRPKQTYR 890
>gi|449303317|gb|EMC99325.1| hypothetical protein BAUCODRAFT_399389 [Baudoinia compniacensis
UAMH 10762]
Length = 1096
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/865 (59%), Positives = 629/865 (72%), Gaps = 77/865 (8%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELPPHAC YCGIH+P V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH PL
Sbjct: 93 ELPPHACAYCGIHNPGSVVKCLTCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPSSPL 152
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DR
Sbjct: 153 GDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSKWQPLIEDR 212
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
SFL WLV PT+QEQ R R + IAKLEE+WK+N AT QDLEK G+D++P VLLR
Sbjct: 213 SFLPWLVTTPTDQEQMRARHLMPQVIAKLEEMWKENTNATIQDLEKNAGMDDEPAPVLLR 272
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D Y
Sbjct: 273 --------------------YD-----------------------------------DAY 277
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYDK+LKE+Q+Q+N+ VRWD GLN K +A F L K + GD++L G
Sbjct: 278 QYQNVFGPLVKIEADYDKKLKEAQSQDNLIVRWDFGLNNKHLASFVLPKLELGDVKLAVG 337
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE+++RY + W G+G+VIKIP+N DEV +EL+S PTE T F+ D++WK
Sbjct: 338 DEMRIRYIGELRAHWEGVGYVIKIPNNVSDEVTIELRSRGDHKSVPTECTHNFTADYVWK 397
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + ++P+ FS PNLPDLN SQ+
Sbjct: 398 ATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKVNMPRKFSVPNLPDLNGSQI 457
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK + +PLSLIQGPPGTGKTVTSAT++Y L K G VLVCAPSN+AVDQL E+IH+
Sbjct: 458 NAVKSVLTKPLSLIQGPPGTGKTVTSATVIYHLSKINGGQVLVCAPSNVAVDQLCERIHK 517
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLK VRV AKSRE +DSPVSFL+LH Q++ + N EL KL QLK E GELSS DEK+++
Sbjct: 518 TGLKCVRVTAKSREDVDSPVSFLSLHRQVQMNDTNVELNKLQQLKAELGELSSQDEKKFK 577
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + AE+ +L NADVICCTCVGAGDPRL K KF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 578 TLTRAAEREILSNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMIPLVLGCKQ 637
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M +LG P RL+VQYRMHP LS+FPSN F
Sbjct: 638 VVLVGDHQQLGPVIMN-----------------ILGCAPIRLQVQYRMHPCLSEFPSNMF 680
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNG+ ER L +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEKI
Sbjct: 681 YEGSLQNGITMQERLLRNVDFPWPVADAPMMFWSNLGNEEISASGTSYLNRTEASNVEKI 740
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G+KPE IG+ITPYEGQR+++VQ MQ G+ +IY+E+EVASVDAFQGREKD
Sbjct: 741 VTRFFKAGVKPESIGIITPYEGQRSYVVQSMQQTGTFRKEIYKEVEVASVDAFQGREKDF 800
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVL+K PLW+ LL +KE+
Sbjct: 801 IVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLAKHPLWHYLLLHFKERN 860
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ F KPK ++
Sbjct: 861 CLVEGPLSNLQTSLLQFGKPKMSYR 885
>gi|85101908|ref|XP_961233.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|11595520|emb|CAC18314.1| probable nonsense-mediated mRNA decay protein [Neurospora crassa]
gi|28922775|gb|EAA31997.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
Length = 1093
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/866 (59%), Positives = 638/866 (73%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELPPHAC YCGIH P+ V+ C C KWFC+ +G SHI+NHLVRA+HKEV LH +
Sbjct: 96 KELPPHACAYCGIHSPSSVVKCLTCNKWFCSAKGSAFSSHIVNHLVRARHKEVQLHPESS 155
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PC A S KDM+WD +W+PLI D
Sbjct: 156 LGDTVLECYNCGTKNVFILGFIPAKSDTVVVLLCRQPCGASTSTKDMSWDISRWQPLIED 215
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLL 273
R+FL+WLV PT+ EQ R R +T IAKLEE+WK+ AT DLEK GVD+DPH VLL
Sbjct: 216 RAFLNWLVTPPTDAEQLRARHLTPPMIAKLEEMWKEAPNATVADLEKTAGVDDDPHPVLL 275
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 276 K--------------------YD-----------------------------------DP 280
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
Y YQNIFGPLVK+E+DYDK+LKE+Q+++ + VRW +GLN K +A F L K + GD++L
Sbjct: 281 YHYQNIFGPLVKMESDYDKKLKEAQSEDGLQVRWHLGLNSKHVASFILPKIESGDVKLAV 340
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y + W G+G+VIKIP+N DEV +EL+ SA PTE T FS D++W
Sbjct: 341 GDEMRLKYKGELRPPWEGVGYVIKIPNNQSDEVEVELRKSANDKSVPTECTHNFSADYVW 400
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQLA++ FAVD+ SVS YI+H+LLGH V + +PK F P LP+LN SQ
Sbjct: 401 KATSYDRMQLAMKTFAVDEMSVSGYIFHKLLGHEVQVAPTKITMPKKFHVPGLPELNASQ 460
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ A+K + PLSLIQGPPGTGKTVTSATI+Y L K + S VLVCAPSN+AVDQL E+IH
Sbjct: 461 IAAIKQVLSNPLSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPSNVAVDQLCERIH 520
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLKVVR+ AKSRE ++S VSFLALH Q+R N EL L++LK ETGELSS DEKR+
Sbjct: 521 RTGLKVVRLTAKSREDVESSVSFLALHEQVRMNTTNKELDGLVKLKTETGELSSQDEKRF 580
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 581 KQLTRQAEREILQNADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCK 640
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L P RL+VQYRMHP LS+FPSN
Sbjct: 641 QVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLQFTPIRLKVQYRMHPCLSEFPSNM 700
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV A ER +DFPWPVP+ PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 701 FYEGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSNLGNEEISASGTSYLNRTEAANVEK 760
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD
Sbjct: 761 IVTRFFKAGVKPADIGVITPYEGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKD 820
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSN++QGIGFL+DPRRLNVALTRAKYG+++IGNPKVL K LW++LL +K++
Sbjct: 821 FIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLCKHELWHHLLVHFKDK 880
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
K LVEGPL NL+ SL+ F +P+Q ++
Sbjct: 881 KCLVEGPLTNLQPSLLQFGRPRQAYR 906
>gi|330918442|ref|XP_003298225.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
gi|311328707|gb|EFQ93678.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/865 (59%), Positives = 634/865 (73%), Gaps = 60/865 (6%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELP HAC YCGIH+ V+ C C KWFC+ RG++S SHIINHLVRA+HKEV LH L
Sbjct: 81 ELPAHACAYCGIHNAGSVVKCLACSKWFCSARGNSSSSHIINHLVRARHKEVQLHPASSL 140
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DR
Sbjct: 141 GDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSQKDMNWDTSRWQPLIEDR 200
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
SFL WLV PT+QEQ R R +T IAKLEE+WKDN AT DLEK G +E +VLLR
Sbjct: 201 SFLPWLVPAPTDQEQLRARHLTPQTIAKLEELWKDNINATIADLEKGAGQEEVIAKVLLR 260
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D +
Sbjct: 261 --------------------YD-----------------------------------DAF 265
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKESQ+Q+N+ VRWD+ LN K A F L K + GD++L G
Sbjct: 266 QYQNVFGPLVKIEADYDRKLKESQSQDNLVVRWDMALNNKHTASFILPKLELGDVKLAVG 325
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE++LRY+ + W G+G+VIKIP+N DEV +EL++ PTE T FS D++WK
Sbjct: 326 DEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECTHNFSADYVWK 385
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + +P+ FS P LP+LN SQ+
Sbjct: 386 ATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKIQIPRKFSVPGLPELNASQI 445
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K + S VLVCAPSN+AVDQL E+IH
Sbjct: 446 NAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLCKISQSQVLVCAPSNVAVDQLCERIHL 505
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLK VRV AKSRE ++SPV FL+LH Q+R + N EL KL QLK + GELSS DEK+++
Sbjct: 506 TGLKTVRVTAKSREDVESPVGFLSLHEQVRMNDTNVELNKLNQLKSDVGELSSQDEKKFK 565
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + AE+ +L ADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 566 QLTRAAEREILMAADVICCTCVGAGDPRLSKMKFRTVLIDESTQSAEPECMIPLVLGCKQ 625
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA AGL+QSLFERLV+LG P RL+VQYRMHP LS+FPSN F
Sbjct: 626 VVLVGDHQQLGPVIMNKKAATAGLNQSLFERLVILGCSPIRLQVQYRMHPCLSEFPSNMF 685
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA NVEKI
Sbjct: 686 YEGSLQNGVTMQERIRRDVDFPWPVVDSPMMFWSNLGAEEISASGTSYLNRTEAQNVEKI 745
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G++P IG+ITPYEGQR+++V MQ GS + Y+E+EVASVDAFQGREKD
Sbjct: 746 VTRFFKAGVQPGDIGIITPYEGQRSYVVSSMQATGSFKKENYKEVEVASVDAFQGREKDF 805
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
II+SCVRSN+HQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL +KE+
Sbjct: 806 IILSCVRSNEHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHYLLLHFKERN 865
Query: 931 VLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL NL+ SL+ FS+PKQ ++
Sbjct: 866 CLVEGPLTNLQVSLLQFSRPKQTYR 890
>gi|336263126|ref|XP_003346344.1| hypothetical protein SMAC_07821 [Sordaria macrospora k-hell]
gi|380091672|emb|CCC10804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1093
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/866 (59%), Positives = 638/866 (73%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELPPHAC YCGIH P+ V+ C C KWFC+ +G SHI+NHLVRA+HKEV LH +
Sbjct: 96 KELPPHACAYCGIHSPSSVVKCLACNKWFCSAKGSGFSSHIVNHLVRARHKEVQLHPESS 155
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PC A S KDM+WD +W+PLI D
Sbjct: 156 LGDTVLECYNCGTKNVFILGFIPAKSDTVVVLLCRQPCGASTSTKDMSWDISRWQPLIED 215
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLL 273
R+FLSWLV PT+ EQ R R +T IAKLEE+WK+ AT DLEK GVD+DPH VLL
Sbjct: 216 RAFLSWLVTPPTDAEQLRARHLTPPMIAKLEEMWKEAPNATVADLEKSAGVDDDPHPVLL 275
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 276 K--------------------YD-----------------------------------DP 280
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
Y YQNIFGPLVK+E+DYDK+LKE+Q+++ + VRW +GLN K +A F L K + GD++L
Sbjct: 281 YHYQNIFGPLVKMESDYDKKLKEAQSEDGLQVRWHLGLNSKHVASFILPKIESGDVKLAV 340
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y + W G+G+VIKIP+N DEV +EL+ SA PTE T FS D++W
Sbjct: 341 GDEMRLKYKGELRPPWEGVGYVIKIPNNQSDEVEVELRKSANDKSVPTECTHNFSADYVW 400
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQLA++ FAVD+ SVS YI+H+LLGH V + +PK F P LP+LN SQ
Sbjct: 401 KATSYDRMQLAMKTFAVDEMSVSGYIFHKLLGHEVQVAPTKITMPKKFHVPGLPELNASQ 460
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ A+K + PLSLIQGPPGTGKTVTSATI+Y L K + S VLVCAPSN+AVDQL E+IH
Sbjct: 461 IAAIKQVLSNPLSLIQGPPGTGKTVTSATIIYHLAKMSNSQVLVCAPSNVAVDQLCERIH 520
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLKVVR+ AKSRE ++S VSFLALH Q+R N EL L++LK ETGELSS DEKR+
Sbjct: 521 RTGLKVVRLTAKSREDVESSVSFLALHEQVRMNTTNKELDGLVKLKTETGELSSQDEKRF 580
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 581 KQLTRQAEREILQNADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCK 640
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L P RL+VQYRMHP LS+FPSN
Sbjct: 641 QVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLQFTPIRLKVQYRMHPCLSEFPSNM 700
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FY+GSLQNGV A ER +DFPWPVP+ PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 701 FYDGSLQNGVTAAERLRKDVDFPWPVPETPMMFWSNLGNEEISASGTSYLNRTEAANVEK 760
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G+KP IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREK+
Sbjct: 761 IVTRFFKAGVKPADIGVITPYEGQRSYIVNTMQNTGTFKKESYREVEVASVDAFQGREKE 820
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSN++QGIGFL+DPRRLNVALTRAKYG+++IGNPKVL K LW++LL +K++
Sbjct: 821 FIVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLCKHELWHHLLVHFKDK 880
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
K LVEGPL NL+ SL+ F +P+Q ++
Sbjct: 881 KCLVEGPLTNLQPSLLQFGRPRQAYR 906
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 1080 bits (2793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/863 (59%), Positives = 635/863 (73%), Gaps = 58/863 (6%)
Query: 98 PPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGE 157
PPHAC YCGIH PA V+ C C+KWFC+ RG++S SHIINHLVRA+HKEV LH LG+
Sbjct: 100 PPHACAYCGIHSPASVVKCLTCEKWFCSARGNSSSSHIINHLVRARHKEVQLHPQSSLGD 159
Query: 158 TVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSF 217
T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W+PLI DRSF
Sbjct: 160 TILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAASTSAKDMSWDVSRWQPLIEDRSF 219
Query: 218 LSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLRYE 276
L WLV+ PT+ EQ R R +T IAKLEE+WK++ AT DLEK GVD++PH VLL+YE
Sbjct: 220 LPWLVQPPTDAEQLRARHLTPPMIAKLEEMWKESPNATVADLEKNNGVDDEPHPVLLKYE 279
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQY 336
D Y YQNIFGPLVK+E+DYD++LKE+Q+++N+ VRWD+GLN K + F L K
Sbjct: 280 DPYHYQNIFGPLVKMESDYDRKLKEAQSEDNLQVRWDMGLNNKHLVSFILPKI------- 332
Query: 337 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDEL 396
E+ V+ VG DE+
Sbjct: 333 ------------------------ESGDVKLAVG-----------------------DEM 345
Query: 397 KLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWKSTS 453
+L+Y D W G+G+VIKIP+N DEV LEL+ S PT+ TT FS D++WK+TS
Sbjct: 346 RLKYKGDLRPYWEGVGYVIKIPNNQSDEVTLELRKSPNDKSVPTDVTTCFSADYVWKATS 405
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
+DRMQ A++ FAVD+ SVS YI+H+LLGH V + LPK F P LP+LN SQ+ A+
Sbjct: 406 YDRMQAAMKTFAVDEMSVSGYIFHKLLGHEVAVAPMKTQLPKKFHVPGLPELNHSQITAI 465
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K + PLSLIQGPPGTGKTVTSATI+Y L K S VLVCAPSN+AVDQL E+IHRTGL
Sbjct: 466 KTVLSTPLSLIQGPPGTGKTVTSATIIYHLCKMNNSQVLVCAPSNVAVDQLCERIHRTGL 525
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
KVVR+ AKSRE ++S V FLALH Q+R N +L+KL QLK E GELSS DEK+ + L
Sbjct: 526 KVVRLTAKSREDVESSVKFLALHEQVRMHTGNPDLRKLAQLKAEVGELSSQDEKKLKQLT 585
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ AE+ +L NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG KQ +L
Sbjct: 586 RQAEREILANADVVCCTCVGAGDPRLAKMKFRNVLIDESTQSAEPECMIPLVLGCKQAVL 645
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDH QLGPV+M KKAA+AGL+QSLFERLV L + P RL VQYRMHP LS+FPSN FYEG
Sbjct: 646 VGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLNLTPIRLNVQYRMHPCLSEFPSNMFYEG 705
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
SLQNGV ER +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA+NVEK+ TR
Sbjct: 706 SLQNGVTHAERIRKDVDFPWPVADMPMMFWSNLGSEEISASGTSYLNRTEAANVEKVVTR 765
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
F + G+KP IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD I++
Sbjct: 766 FFKAGVKPSDIGVITPYEGQRSYIVSTMQNTGTFKKEWYKEVEVASVDAFQGREKDYIVL 825
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVRSND+QGIGFL+DPRRLNVALTRAKYG+++IGNPKVL+K LW++LL +K++K LV
Sbjct: 826 SCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLAKHELWHHLLVHFKDRKCLV 885
Query: 934 EGPLNNLKESLILFSKPKQYFKK 956
EGPLNNL+ SL+ F KPK +++
Sbjct: 886 EGPLNNLQTSLLQFPKPKTAYRQ 908
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/967 (55%), Positives = 678/967 (70%), Gaps = 91/967 (9%)
Query: 2 SVDAYGPSSQTLTFLDTEETDLIG--GDTQGSEFDFTDFTLPSQSQTQASQLD---SVNQ 56
S A + L+ +D +E+ L G GD G D +QT+A + D S+N
Sbjct: 16 SAAAIKAGADDLSTIDPDESLLYGKYGDRNGRRRADDD-----DNQTEAFEEDDNDSLNS 70
Query: 57 IQVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC 116
+ ++G L +L+ ++EE KELP HAC YCGIH P V+ C
Sbjct: 71 VPIDGLTGL-------------KLKGQDEE--------KELPAHACAYCGIHSPGCVVKC 109
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
C KWFC+ RG+ + +HI+NHLVRA+HKEV LH + LG+TVLECY CG +N F+LGFI
Sbjct: 110 LTCNKWFCSARGNGTSTHIVNHLVRARHKEVQLHPESTLGDTVLECYNCGTKNAFLLGFI 169
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAK+D+VVVLLCR PCAA S KDMNWD +W+PLI +R+FL WLV P++ EQ R R +
Sbjct: 170 PAKSDTVVVLLCRQPCAANTSNKDMNWDTSRWQPLIEERAFLPWLVATPSDSEQLRARHL 229
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPG-VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADY 295
T IAKLEE+WK +AT DLEK +D+DP VLL +Y
Sbjct: 230 TPNMIAKLEEMWKIEPKATVVDLEKAASIDDDPQPVLL--------------------NY 269
Query: 296 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLK 355
D D Y YQNIFGPLVK+E+DYDK+LK
Sbjct: 270 D-----------------------------------DPYHYQNIFGPLVKMESDYDKKLK 294
Query: 356 ESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHV 414
E+Q+++ + VRWD GLN K + F+L K + GD++L GDE++LRY + W G+G+V
Sbjct: 295 EAQSEDGLLVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYKGELRSPWEGVGYV 354
Query: 415 IKIPDNFGDEVGLELKSSAG---APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSV 471
IKIP+N DEV LEL+ + PT+ + FS D++WK+TS+DRMQLA++ FAVDD SV
Sbjct: 355 IKIPNNQSDEVTLELRKTGNEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSV 414
Query: 472 SAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTG 531
S YI+H LLGH V + + +LPK +SAP LPDLN SQV A+K +Q+PLSLIQGPPGTG
Sbjct: 415 SGYIFHTLLGHEVQLQVMKTNLPKKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQGPPGTG 474
Query: 532 KTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
KTVTSATI+Y L K +G+ VLVCAPSN+AVDQL E++HRTGLKVVR+ AKSRE ++S VS
Sbjct: 475 KTVTSATIIYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVS 534
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
FLALH Q+R E NSEL KL QLK E GELSS DEK+Y+ L K AE+ +L+NADV+CCTC
Sbjct: 535 FLALHEQVRMSEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERDILNNADVVCCTC 594
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
VGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+
Sbjct: 595 VGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAK 654
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
AGL+QSLFERLV L + P RL +QYRMHP LS+FPSN FY+GSLQNGV + R +DF
Sbjct: 655 AGLNQSLFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDF 714
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
PWPV + PM+F+ G EEI+ SGTSY+NRTEASNVEK TRF + G+KP IGVITPYE
Sbjct: 715 PWPVGEMPMMFWSNLGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADIGVITPYE 774
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
GQR+++V MQ G+ + Y+E+EVASVDAFQGREKD I++SCVRSND+QGIGFL+DPR
Sbjct: 775 GQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPR 834
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RLNVALTRAKYG++++GNPKVLSK LW+NLL +K++K VEGPL NL+ L+ FS+PK
Sbjct: 835 RLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRPK 894
Query: 952 QYFKKNN 958
+++ N
Sbjct: 895 VSYRQKN 901
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/899 (57%), Positives = 655/899 (72%), Gaps = 67/899 (7%)
Query: 66 DNSNLNLVS-QKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFC 124
DN +LN V L+ L+ + ++++ KELP HAC YCGIH P V+ C C KWFC
Sbjct: 64 DNDSLNSVPVDGLNGLKLKGKDEE------KELPAHACAYCGIHSPGCVVKCLTCNKWFC 117
Query: 125 NGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV 184
+ RG+ + +HI+NHLVRA+HKEV LH + LG+TVLECY CG +N F+LGFIPAK+D+VV
Sbjct: 118 SARGNGTSTHIVNHLVRARHKEVQLHPESTLGDTVLECYNCGTKNAFLLGFIPAKSDTVV 177
Query: 185 VLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
VLLCR PCAA S KDMNWD +W+PLI +R+FL WLV P++ EQ R R +T IAKL
Sbjct: 178 VLLCRQPCAANTSNKDMNWDTSRWQPLIEERAFLPWLVATPSDSEQLRARHLTPNMIAKL 237
Query: 245 EEVWKDNAEATFQDLEKPG-VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQ 303
EE+WK +AT DLEK +D+DP VLL +YD
Sbjct: 238 EEMWKIEPKATVVDLEKAASIDDDPQPVLL--------------------NYD------- 270
Query: 304 TQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV 363
D Y YQNIFGPLVK+E+DYDK+LKE+Q+++ +
Sbjct: 271 ----------------------------DPYHYQNIFGPLVKMESDYDKKLKEAQSEDGL 302
Query: 364 TVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFG 422
VRWD GLN K + F+L K + GD++L GDE++LRY + W G+G+VIKIP+N
Sbjct: 303 LVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYKGELRSPWEGVGYVIKIPNNQS 362
Query: 423 DEVGLELKSSAG---APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 479
DEV LEL+ + PT+ + FS D++WK+TS+DRMQLA++ FAVDD SVS YI+H L
Sbjct: 363 DEVTLELRKTGNEKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHTL 422
Query: 480 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATI 539
LGH V + + +LPK +SAP LPDLN SQV A+K +Q+PLSLIQGPPGTGKTVTSATI
Sbjct: 423 LGHEVQLQVMKTNLPKKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQGPPGTGKTVTSATI 482
Query: 540 VYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI 599
+Y L K +G+ VLVCAPSN+AVDQL E++HRTGLKVVR+ AKSRE ++S VSFLALH Q+
Sbjct: 483 IYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHEQV 542
Query: 600 RNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
R E NSEL KL QLK E GELSS DEK+Y+ L K AE+ +L+NADV+CCTCVGAGDPRL
Sbjct: 543 RMSEHNSELVKLSQLKNELGELSSQDEKKYKQLTKIAERDILNNADVVCCTCVGAGDPRL 602
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
K+KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLF
Sbjct: 603 SKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLF 662
Query: 720 ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
ERLV L + P RL +QYRMHP LS+FPSN FY+GSLQNGV + R +DFPWPV + P
Sbjct: 663 ERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTHENRLRKDVDFPWPVGEMP 722
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
M+F+ G EEI+ SGTSY+NRTEASNVEK TRF + G+KP IGVITPYEGQR+++V
Sbjct: 723 MMFWSNLGHEEISASGTSYLNRTEASNVEKAVTRFFKAGVKPADIGVITPYEGQRSYIVT 782
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
MQ G+ + Y+E+EVASVDAFQGREKD I++SCVRSND+QGIGFL+DPRRLNVALTR
Sbjct: 783 TMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTR 842
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
AKYG++++GNPKVLSK LW+NLL +K++K VEGPL NL+ L+ FS+PK F++ N
Sbjct: 843 AKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRPKVSFRQKN 901
>gi|406864055|gb|EKD17101.1| RNA helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1098
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/866 (59%), Positives = 641/866 (74%), Gaps = 60/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC YCGIH P+ V+ C C KWFC+ RG+ + SHI+NHLVRA+HKEV LH
Sbjct: 92 KELPAHACAYCGIHSPSSVVKCLGCTKWFCSARGNATSSHIVNHLVRARHKEVQLHPLST 151
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCA+ S KDM+WD +W+PLI D
Sbjct: 152 LGDTVLECYICGTKNVFLLGFIPAKSDTVVVLLCRQPCASTPSSKDMSWDISRWQPLIED 211
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL WLV VPT+ EQ R R +T IAKLEE+WKDNA AT QDLEK G+D+DP VLL
Sbjct: 212 RSFLPWLVPVPTDAEQLRARHLTPPMIAKLEEMWKDNASATIQDLEKAAGLDDDPAPVLL 271
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 272 K--------------------YD-----------------------------------DA 276
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQN+FGPLVK+EADYD++LKE+Q+++ + +RWD GLN K +A F L K + GD++L
Sbjct: 277 YQYQNVFGPLVKIEADYDRKLKEAQSEDGLIIRWDYGLNNKHLASFVLPKIELGDVKLAV 336
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK---SSAGAPTEATTGFSVDFIW 449
GDE++L+Y + W G+G+V+KIP+N DEV +EL+ + PTE T FS D++W
Sbjct: 337 GDEMRLKYKGELRPFWEGVGYVVKIPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVW 396
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQ A++ FA+D+ SVS YI+H+LLGH V + +PK F+ P LP+LN SQ
Sbjct: 397 KATSYDRMQFAMKTFAIDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFTVPGLPELNNSQ 456
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSAT++Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 457 INAVKSVLQKPLSLIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIH 516
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLKVVR+ AKSRE + S V FL+LH Q+R + N EL KL QLK E GELSS DEK++
Sbjct: 517 RTGLKVVRLTAKSREDVQSSVGFLSLHEQVRMNDSNLELTKLSQLKSELGELSSQDEKKF 576
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 577 KTLTRGAEREILTNADVICCTCVGAGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCK 636
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV LG P RL+VQYRMHP LS+FPSN
Sbjct: 637 QVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVQLGQNPIRLDVQYRMHPCLSEFPSNM 696
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEK
Sbjct: 697 FYEGSLQNGVTMVQRIRCDVDFPWPVSDTPMMFWSNLGNEEISASGTSYLNRTEASNVEK 756
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G++P IGVITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGREKD
Sbjct: 757 IVTRFFKAGVQPADIGVITPYEGQRSYVVSSMQNTGTFKKENYKEIEVASVDAFQGREKD 816
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLW++LL +KE+
Sbjct: 817 FIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWHHLLLHFKER 876
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
LVEGPL+NL+ SL+ FS+PK ++
Sbjct: 877 DCLVEGPLSNLQTSLLQFSRPKSTYR 902
>gi|171693713|ref|XP_001911781.1| hypothetical protein [Podospora anserina S mat+]
gi|170946805|emb|CAP73609.1| unnamed protein product [Podospora anserina S mat+]
Length = 1090
Score = 1075 bits (2781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/868 (58%), Positives = 640/868 (73%), Gaps = 62/868 (7%)
Query: 95 KELPPHACKYCGIHDPAYVIMC--NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKD 152
KELP HAC YCGIH P+ V+ C C KWFC+ RG++S SHI+NHLVRA+HKEV LH +
Sbjct: 85 KELPAHACAYCGIHSPSCVVKCIAKECNKWFCSARGNSSSSHIVNHLVRARHKEVQLHPE 144
Query: 153 GPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLI 212
LG+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA +S KDM+WD +W+PLI
Sbjct: 145 SALGDTTLECYNCGNKNVFMLGFIPAKSDTVVVLLCRQPCAAGSSAKDMSWDVSRWQPLI 204
Query: 213 ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQV 271
DRSFL+W+V PT+ EQ R R +T IAKLEE+WK+ AT DLEK GVD+DPH V
Sbjct: 205 EDRSFLNWIVSPPTDAEQLRARHLTPPMIAKLEEMWKEAPSATVADLEKGTGVDDDPHPV 264
Query: 272 LLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG 331
LL+ YD
Sbjct: 265 LLK--------------------YD----------------------------------- 269
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRL 390
D Y YQN+FGPLVK+E+DYDK+LKE+Q+++++ VRWD+GLN K +A F L K + GD++L
Sbjct: 270 DPYHYQNVFGPLVKMESDYDKKLKEAQSEDHLVVRWDMGLNNKHLASFILPKIESGDVKL 329
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDF 447
GDE++++Y + W G+G+VIKIP+N DEV LEL+ +A PTE T FS D+
Sbjct: 330 AVGDEMRIKYKGELRAPWEGVGYVIKIPNNQSDEVTLELRKAANDKSVPTECTHNFSADY 389
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+WK+TS+DRMQ A++ FAVD+ SVS YI+H+LLGH V + +PK F P LP+LN
Sbjct: 390 VWKATSYDRMQFAMKTFAVDELSVSGYIFHKLLGHEVAVAPMKTQMPKRFHVPGLPELNH 449
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQ+ A+K + PLSLIQGPPGTGKTVTSATI+Y L + S VLVCAPSN+AVDQL E+
Sbjct: 450 SQITAIKTVLSTPLSLIQGPPGTGKTVTSATIIYHLARMNNSQVLVCAPSNVAVDQLCER 509
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEK 627
IHRTGLKVVR+ AKSRE ++S VSFLALH Q+R + +SEL L +LK GELSS DEK
Sbjct: 510 IHRTGLKVVRLTAKSREDVESSVSFLALHEQVRLYKQSSELTNLNKLKAAAGELSSQDEK 569
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
R++ L + AE+ +L++ADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG
Sbjct: 570 RFKQLTRQAEREILNSADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLG 629
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L + P RL VQYRMHP LS+FPS
Sbjct: 630 CKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLNLVPIRLNVQYRMHPCLSEFPS 689
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FYEGSLQNGV ER +DFPWPV + PM+F+ G EEI+ SGTSY+NRTEASNV
Sbjct: 690 NMFYEGSLQNGVTITERLRKDVDFPWPVAETPMMFWSNLGNEEISASGTSYLNRTEASNV 749
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
EKI TRF + G+KP IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGRE
Sbjct: 750 EKIVTRFFKAGVKPSDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGRE 809
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD I++SCVRSND+QGIGFL+DPRRLNVALTRAKYG+++IGNPKVLSK LW++LL +K
Sbjct: 810 KDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFK 869
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQYFK 955
++K LVEGPL NL+ SLI FS+PK F+
Sbjct: 870 DRKCLVEGPLTNLQTSLIQFSRPKMSFR 897
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 1071 bits (2769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/866 (58%), Positives = 637/866 (73%), Gaps = 60/866 (6%)
Query: 98 PPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGE 157
P HAC YCGIH P V+ C C KWFC+ RG+ + +HI+NHLVRA+HKEV LH + LG+
Sbjct: 91 PAHACAYCGIHSPGCVVKCLTCNKWFCSARGNGTSTHIVNHLVRARHKEVQLHPESTLGD 150
Query: 158 TVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSF 217
TVLECY CG +N F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI +R+F
Sbjct: 151 TVLECYNCGTKNAFLLGFIPAKSDTVVVLLCRQPCAANTSNKDMNWDTSRWQPLIEERAF 210
Query: 218 LSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG-VDEDPHQVLLRYE 276
L WLV P++ EQ R R +T IAKLEE+WK +AT DLEK +D+DP VLL
Sbjct: 211 LPWLVATPSDSEQLRARHLTPNMIAKLEEMWKIEPKATVVDLEKAASIDDDPQPVLL--- 267
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQY 336
+YD D Y Y
Sbjct: 268 -----------------NYD-----------------------------------DPYHY 275
Query: 337 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDE 395
QNIFGPLVK+E+DYDK+LKE+Q+++ + VRWD GLN K + F+L K + GD++L GDE
Sbjct: 276 QNIFGPLVKMESDYDKKLKEAQSEDGLLVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDE 335
Query: 396 LKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG---APTEATTGFSVDFIWKST 452
++LRY + W G+G+VIKIP+N DEV LEL+ + PT+ + FS D++WK+T
Sbjct: 336 MRLRYKGELRSPWEGVGYVIKIPNNQSDEVTLELRKTGNEKLVPTDLSHNFSADYVWKAT 395
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYA 512
S+DRMQLA++ FAVDD SVS YI+H LLGH V + + +LPK +SAP LPDLN SQV A
Sbjct: 396 SYDRMQLAMKTFAVDDMSVSGYIFHTLLGHEVQLQVMKTNLPKKWSAPGLPDLNPSQVGA 455
Query: 513 VKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTG 572
+K +Q+PLSLIQGPPGTGKTVTSATI+Y L K +G+ VLVCAPSN+AVDQL E++HRTG
Sbjct: 456 IKAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKMSGNQVLVCAPSNVAVDQLCERVHRTG 515
Query: 573 LKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRML 632
LKVVR+ AKSRE ++S VSFLALH Q+R E NSEL KL QLK E GELSS DEK+Y+ L
Sbjct: 516 LKVVRLTAKSREDVESSVSFLALHEQVRMSEHNSELVKLSQLKNELGELSSQDEKKYKQL 575
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLI 692
K AE+ +L+NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG KQ++
Sbjct: 576 TKIAERDILNNADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVV 635
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYE 752
LVGDH QLGPV+M KKAA+AGL+QSLFERLV L + P RL +QYRMHP LS+FPSN FY+
Sbjct: 636 LVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNLKLSPIRLNIQYRMHPCLSEFPSNMFYD 695
Query: 753 GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITT 812
GSLQNGV + R +DFPWPV + PM+F+ G EEI+ SGTSY+NRTEASNVEK T
Sbjct: 696 GSLQNGVTHENRLRKDVDFPWPVGEMPMMFWSNLGHEEISASGTSYLNRTEASNVEKAVT 755
Query: 813 RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
RF + G+KP IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD I+
Sbjct: 756 RFFKAGVKPADIGVITPYEGQRSYIVTTMQNSGTYKKEYYKEVEVASVDAFQGREKDFIV 815
Query: 873 MSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
+SCVRSND+QGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK LW+NLL +K++K
Sbjct: 816 LSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHELWHNLLVHFKDRKCF 875
Query: 933 VEGPLNNLKESLILFSKPKQYFKKNN 958
VEGPL NL+ L+ FS+PK F++ N
Sbjct: 876 VEGPLTNLQACLLQFSRPKVSFRQKN 901
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/898 (57%), Positives = 654/898 (72%), Gaps = 65/898 (7%)
Query: 66 DNSNLNLVS-QKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFC 124
DN +LN V ++ ++ + E++ KELPPHAC YCGIH PA V+ C C KWFC
Sbjct: 64 DNDSLNSVPIDQMMGMKLKHPEEE------KELPPHACAYCGIHSPACVVKCLTCNKWFC 117
Query: 125 NGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV 184
+ RG S +HI+NHLVRA+HKEV LH + LG+TVLECY+CG +N F+LGFIPAK+D+VV
Sbjct: 118 SARGSGSSTHIVNHLVRARHKEVQLHPESTLGDTVLECYSCGTKNAFILGFIPAKSDAVV 177
Query: 185 VLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
VLLCR PCAA NS KDMNWD +W+PLI +R+FL WLV P++ EQ R R +T IAKL
Sbjct: 178 VLLCRQPCAAANSNKDMNWDTSRWEPLIEERAFLPWLVNPPSDAEQLRARHLTMNTIAKL 237
Query: 245 EEVWKDNAEATFQDLEKPG-VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQ 303
EE+WK +AT QDLEK +D+DP V L Y+D Y YQNIFGPLVK+E+DYDK+LKE+Q
Sbjct: 238 EEMWKQEPDATIQDLEKASNIDDDPLPVQLTYDDPYHYQNIFGPLVKMESDYDKKLKEAQ 297
Query: 304 TQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV 363
+++ +TVRWD LN K IA F+L K E+
Sbjct: 298 SEDGLTVRWDYALNNKHIASFNLQKI-------------------------------ESG 326
Query: 364 TVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGD 423
V+ VG DE++LRY+ + + W G+G+VIKIP++ D
Sbjct: 327 DVKLAVG-----------------------DEMRLRYTGELREEWEGVGYVIKIPNSQSD 363
Query: 424 EVGLELKSSAG---APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLL 480
EV LEL+ + P + + FS D++WK+TS+DRMQLA++ FAVDD SVS YI+H LL
Sbjct: 364 EVCLELRKTGNDKLVPIDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHILL 423
Query: 481 GHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV 540
GH + LPK +SAP LPDLN+ QV A++ +Q+PLSLIQGPPGTGKTVTSATI+
Sbjct: 424 GHICQPPPMKVTLPKKWSAPGLPDLNQGQVDAIRAVLQKPLSLIQGPPGTGKTVTSATII 483
Query: 541 YQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR 600
Y L K +GS VLVCAPSN+AVDQL E++HRTGLKVVR+ AKSRE ++S VSFLALH Q+R
Sbjct: 484 YHLAKMSGSQVLVCAPSNVAVDQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHEQVR 543
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
E NSEL KL QLK E GELSS DEK+ R L K AE+ +L NADVICCTCVGAGDPRL
Sbjct: 544 MSEHNSELVKLSQLKVEVGELSSQDEKKLRQLTKAAEREILSNADVICCTCVGAGDPRLS 603
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
K+KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL++SLFE
Sbjct: 604 KMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNRSLFE 663
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
RL+ L I P L+ QYRMHP LS+FPSN FY+G+LQNG+ ++R +DFPWPV + PM
Sbjct: 664 RLINLKINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTEMPM 723
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
+F+ G EEI+ SGTSY+NRTEASNVEK TRF + G+KP +IGVITPYEGQR+++V
Sbjct: 724 MFWSNIGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSEIGVITPYEGQRSYIVST 783
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
MQ G+ ++Y+++EVASVDAFQGREKD I++SCVRSND+QGIGFL+DPRRLNVALTRA
Sbjct: 784 MQNSGTYKKELYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRA 843
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
KYG++++GNPKVLSK LW+NLL +K++K VEGPL NL+ L+ FS+P+ +++ N
Sbjct: 844 KYGLVILGNPKVLSKHELWHNLLAHFKDRKCFVEGPLTNLQACLLQFSRPRVSYRQKN 901
>gi|302505946|ref|XP_003014930.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
gi|291178501|gb|EFE34290.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
Length = 1080
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/949 (55%), Positives = 656/949 (69%), Gaps = 104/949 (10%)
Query: 13 LTFLDTEETDL-IGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLN 71
++ +D EE+ L + G Q D D + L+S+ + V+G
Sbjct: 26 ISTVDGEESVLNMAGGPQKRRHDDEDEASDTLDDDDDDDLESMASVAVDG---------- 75
Query: 72 LVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTS 131
+ K + EEE KELP HAC RG+TS
Sbjct: 76 --AGKPQASKTEEE---------KELPAHAC----------------------GARGNTS 102
Query: 132 GSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTP 191
SHI+NHLVRA+HKEV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR P
Sbjct: 103 SSHIVNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQP 162
Query: 192 CAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDN 251
CAA S KDMNWD +W+PL+ DRSFL WLV P++QEQ R R ++ IAKLEE+WK+N
Sbjct: 163 CAAMPSSKDMNWDTSRWQPLMEDRSFLPWLVSAPSDQEQLRARHLSPQMIAKLEELWKEN 222
Query: 252 AEATFQDLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTV 310
A AT +DLEK VD++P VLLR YD
Sbjct: 223 ASATVEDLEKATNVDDEPAPVLLR--------------------YD-------------- 248
Query: 311 RWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVG 370
D YQYQN+FGPLVK+EADYD++LKE+Q+Q+ +TVRWD+G
Sbjct: 249 ---------------------DAYQYQNVFGPLVKIEADYDRKLKEAQSQDGLTVRWDLG 287
Query: 371 LNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLEL 429
LN K +A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL
Sbjct: 288 LNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGELRPKWEGVGYVIKIPNNQSDEVTIEL 347
Query: 430 KSSA---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 486
+S PTE + F+ D++WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V
Sbjct: 348 RSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAA 407
Query: 487 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
+ +PK FS P LP LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K
Sbjct: 408 APMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKV 467
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS 606
VLVCAPSN+AVDQL E IHRTGLK VRV AKSRE ++SPV L+LH Q+RN + N
Sbjct: 468 NAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNI 527
Query: 607 ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
EL KL QLK E GELSS DEK+Y+ L + AEK +L NADVICCTCVGAGDPRL K KF +
Sbjct: 528 ELVKLNQLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSKFRT 587
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG 726
+LIDES Q+ EPECM+P++LG KQ +LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG
Sbjct: 588 VLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILG 647
Query: 727 IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ 786
P RL VQYRMHP LS+F SN FYEGSLQNGV +++R L +DFPWPV DKPM+F+
Sbjct: 648 CAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNL 707
Query: 787 GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGS 846
G EEI+ SGTSY+NRTEA+NVEKI TRF + G+KP IG+ITPYEGQR+++V MQ G+
Sbjct: 708 GNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGT 767
Query: 847 LPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
+ Y+EIEVASVDAFQGREKD I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG+++
Sbjct: 768 FKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI 827
Query: 907 IGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
+GNPKVLSK PLWN LL +KEQ LVEGPL+NL+ SLI FS+PKQ ++
Sbjct: 828 LGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQFSRPKQAYR 876
>gi|302660352|ref|XP_003021856.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
gi|291185774|gb|EFE41238.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
Length = 1080
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/837 (60%), Positives = 622/837 (74%), Gaps = 60/837 (7%)
Query: 124 CNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSV 183
C RG+TS SHI+NHLVRA+HKEV LH LG+T+LECY CG +N+F+LGFIPAK+D+V
Sbjct: 95 CGARGNTSSSHIVNHLVRARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTV 154
Query: 184 VVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAK 243
VVLLCR PCAA S KDMNWD +W+PL+ DRSFL WLV P++QEQ R R ++ IAK
Sbjct: 155 VVLLCRQPCAAMPSSKDMNWDTSRWQPLMEDRSFLPWLVSAPSDQEQLRARHLSPQMIAK 214
Query: 244 LEEVWKDNAEATFQDLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES 302
LEE+WK+NA AT +DLEK VD++P VLLR YD
Sbjct: 215 LEELWKENASATVEDLEKATNVDDEPAPVLLR--------------------YD------ 248
Query: 303 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 362
D YQYQN+FGPLVK+EADYD++LKE+Q+Q+
Sbjct: 249 -----------------------------DAYQYQNVFGPLVKIEADYDRKLKEAQSQDG 279
Query: 363 VTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNF 421
+TVRWD+GLN K +A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N
Sbjct: 280 LTVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYAGELRPKWEGVGYVIKIPNNQ 339
Query: 422 GDEVGLELKSSA---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHR 478
DEV +EL+S PTE + F+ D++WK+TSFDRMQLA++ FAVD+ SVS YI+HR
Sbjct: 340 SDEVTIELRSKGDHKSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHR 399
Query: 479 LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSAT 538
LLG+ V + +PK FS P LP LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSAT
Sbjct: 400 LLGNEVAAAPMKTQMPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPPGTGKTVTSAT 459
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
I+Y L K VLVCAPSN+AVDQL E IHRTGLK VRV AKSRE ++SPV L+LH Q
Sbjct: 460 IIYHLAKVNAGQVLVCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQ 519
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
+RN + N EL KL QLK E GELSS DEK+Y+ L + AEK +L NADVICCTCVGAGDPR
Sbjct: 520 VRNNDSNIELVKLNQLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPR 579
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
L K KF ++LIDES Q+ EPECM+P++LG KQ +LVGDH QLGPV+M KKAA+AGL+QSL
Sbjct: 580 LAKSKFRTVLIDESTQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSL 639
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
FERLV+LG P RL VQYRMHP LS+F SN FYEGSLQNGV +++R L +DFPWPV DK
Sbjct: 640 FERLVILGCAPIRLNVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADK 699
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLV 838
PM+F+ G EEI+ SGTSY+NRTEA+NVEKI TRF + G+KP IG+ITPYEGQR+++V
Sbjct: 700 PMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVV 759
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
MQ G+ + Y+EIEVASVDAFQGREKD I++SCVRSNDHQGIGFL+DPRRLNVALT
Sbjct: 760 SSMQLTGTFKKEWYKEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALT 819
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
RAKYG++++GNPKVLSK PLWN LL +KEQ LVEGPL+NL+ SLI FS+PKQ ++
Sbjct: 820 RAKYGLVILGNPKVLSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQFSRPKQAYR 876
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/837 (60%), Positives = 623/837 (74%), Gaps = 60/837 (7%)
Query: 124 CNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSV 183
C RG+TS SHI+NHLVRA+HKEV LH + LG+T+LECY CG +N+F+LGFIPAK+D+V
Sbjct: 91 CAARGNTSSSHIVNHLVRARHKEVQLHPESSLGDTILECYNCGTKNVFLLGFIPAKSDTV 150
Query: 184 VVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAK 243
VVLLCR PCAA S KDMNWD +W+PLI DRSFL WLV P++QEQ R R ++ IAK
Sbjct: 151 VVLLCRQPCAAMPSSKDMNWDTSRWQPLIEDRSFLPWLVSSPSDQEQLRARHLSPQMIAK 210
Query: 244 LEEVWKDNAEATFQDLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES 302
LEE+WKDNA AT +DLEK GVD++P VLLR YD
Sbjct: 211 LEEMWKDNAAATVEDLEKATGVDDEPAPVLLR--------------------YD------ 244
Query: 303 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 362
D YQYQN+FGPLVK+EADYD++LKE+Q+Q+
Sbjct: 245 -----------------------------DAYQYQNVFGPLVKIEADYDRKLKEAQSQDG 275
Query: 363 VTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNF 421
+ VRWD+GLN K +A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N
Sbjct: 276 LVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGELRPKWDGVGYVIKIPNNQ 335
Query: 422 GDEVGLELKSSA---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHR 478
DEV +EL++ PT+ T F+ D++WK+TSFDRMQLA++ FAVD+ SVS YI+HR
Sbjct: 336 SDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHR 395
Query: 479 LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSAT 538
LLG+ V R +PK FS P LPDLN SQ AVK +Q+PLSLIQGPPGTGKTVTSA
Sbjct: 396 LLGNEVAAGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPPGTGKTVTSAN 455
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
I+Y L K G VLVCAPSN+AVDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q
Sbjct: 456 IIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQ 515
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
+ N + N EL KL QLK E GELSS DEK+++ L + AEK +L NADVICCTCVGAGDPR
Sbjct: 516 VHNNDSNIELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPR 575
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
L K KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSL
Sbjct: 576 LAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSL 635
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
FERLV+LG P RL VQYRMHP LS+FPSN FY+GSLQNGV ER L +DFPWPV
Sbjct: 636 FERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHN 695
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLV 838
PM+F+ G EEI+ SGTSY+NRTEA+NVEKI TRF + G+KP IG+ITPYEGQR+++V
Sbjct: 696 PMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQRSYVV 755
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
MQ G+ ++Y+EIEVASVDAFQGREKD I++SCVRSNDHQGIGFL+DPRRLNVALT
Sbjct: 756 SSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALT 815
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
RAKYG++++GNPKVLSK PLWN LL +KE+ LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 816 RAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQAYR 872
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/866 (57%), Positives = 643/866 (74%), Gaps = 58/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP +AC YCGIH PA V+ C +C KWFC+ RG+++ SHIINHLVRA+HKEV LH +
Sbjct: 87 KELPAYACAYCGIHAPASVVKCLVCNKWFCSARGNSTSSHIINHLVRARHKEVQLHPESA 146
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY+CG +N F+LGFIPAK+DSVVVLLCR PCAA S KDMNWD +W+PLI +
Sbjct: 147 LGDTILECYSCGTKNSFLLGFIPAKSDSVVVLLCRQPCAASASNKDMNWDPSRWEPLIKE 206
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLL 273
R+FL WLV P+E EQ R R ++ IA+LEE+WK AT DL+K VD+DP VLL
Sbjct: 207 RAFLDWLVSAPSEAEQLRARHMSPNTIARLEEMWKLEPNATISDLDKGQTVDDDPDPVLL 266
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+Y+D + YQNIFGPLVK+E+DYDK+LKE+Q+++N+TV W GLN K +A F+L K
Sbjct: 267 KYDDAFHYQNIFGPLVKMESDYDKKLKEAQSEDNLTVEWSQGLNNKHLATFNLRKI---- 322
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
E+ V+ VG
Sbjct: 323 ---------------------------ESGEVKLAVG----------------------- 332
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE+ LRY+ + + W G+G+V+KIP++ DEV LEL+ + PT+ + FS D++WK
Sbjct: 333 DEMLLRYNGELREPWQGVGYVMKIPNSQSDEVCLELRKNGNDRSVPTDLSHNFSADYVWK 392
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TS+DRMQLA++ FAVDD SVS +I+H LLGH+V + +LPK +SAP LPDLN+SQV
Sbjct: 393 ATSYDRMQLAMKTFAVDDMSVSGFIFHTLLGHDVQLQPMKSNLPKKWSAPGLPDLNQSQV 452
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ +Q+PLSLIQGPPGTGKTVTSATI+Y L K +G+ VLVCAPSN+AVDQL E+IHR
Sbjct: 453 DAIRSVLQKPLSLIQGPPGTGKTVTSATIIYHLSKISGNQVLVCAPSNVAVDQLCERIHR 512
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLKVVR+ AKSRE ++S VSFLALH Q+R E NSE KL QLK E GELSS DEK++R
Sbjct: 513 TGLKVVRLTAKSREDVESSVSFLALHEQVRMSEHNSEFAKLSQLKNEAGELSSQDEKKFR 572
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L K AE+ +L+NADV+CCTCVGAGDPRL K+KF S+LIDES Q+ EPEC++P++LG KQ
Sbjct: 573 QLTKAAEREILNNADVVCCTCVGAGDPRLSKLKFRSVLIDESTQSAEPECIIPLMLGCKQ 632
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA+AGLSQSLFERL+ L ++P L QYRMHP LS+FPSN F
Sbjct: 633 VVLVGDHKQLGPVIMNKKAAKAGLSQSLFERLMQLRLQPILLNTQYRMHPCLSEFPSNMF 692
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
Y+GSLQNGV ++R +DFPWPV + PM+F+ G EEI+ SGTSY+NRTEASNVEKI
Sbjct: 693 YDGSLQNGVTQEQRIRKDVDFPWPVAEMPMMFWSNIGNEEISTSGTSYLNRTEASNVEKI 752
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G+KP +IGVITPYEGQR+++V MQ G+ + Y+ +EVASVDAFQGREKD
Sbjct: 753 VTRFFKAGVKPSEIGVITPYEGQRSYIVTTMQNAGTSKKEYYKSVEVASVDAFQGREKDF 812
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSN++QGIGFL+DPRRLNVALTRAKYG++++GNP+VLSK LW NLL +++++
Sbjct: 813 IVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGVVILGNPRVLSKHELWYNLLTHFRDRR 872
Query: 931 VLVEGPLNNLKESLILFSKPKQYFKK 956
VEGPL N ++ L+ FSKP+ + +K
Sbjct: 873 CFVEGPLTNFQQCLLQFSKPRSHRQK 898
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/899 (56%), Positives = 654/899 (72%), Gaps = 67/899 (7%)
Query: 66 DNSNLNLVS-QKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFC 124
DN +LN V + + L+ + +++ KELPPHAC YCGIH PA V+ C C KWFC
Sbjct: 65 DNDSLNSVPVEGMSGLKLKTVDEE------KELPPHACAYCGIHSPACVVKCLTCNKWFC 118
Query: 125 NGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV 184
+ +G+ + +HI+NHLVRA+HKEV LH + LG+TVLECY CG +N F+LGFIPAK+D+VV
Sbjct: 119 SAKGNGTSTHIVNHLVRARHKEVQLHPESTLGDTVLECYNCGTKNAFLLGFIPAKSDTVV 178
Query: 185 VLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
VLLCR PCA+ S KDMNWD +W+PLI +R+FL+WLV P++ EQ R R ++ IAKL
Sbjct: 179 VLLCRQPCASSTSTKDMNWDISRWEPLIEERAFLTWLVSAPSDVEQLRARHLSPNTIAKL 238
Query: 245 EEVWKDNAEATFQDLE-KPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQ 303
EE+WK AT L +D+DP VLLR YD
Sbjct: 239 EEMWKVQPSATVASLSIASNIDDDPDPVLLR--------------------YD------- 271
Query: 304 TQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV 363
D Y YQNIFGPLVK+E+DYDK+LKE+Q+++ +
Sbjct: 272 ----------------------------DPYHYQNIFGPLVKMESDYDKKLKEAQSEDGL 303
Query: 364 TVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFG 422
VRWD GLN K + F+L K + GD++L GDE++LRY+ + + W G+G+VIKIP++
Sbjct: 304 IVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYNGELREPWEGVGYVIKIPNSQS 363
Query: 423 DEVGLELKSSAG---APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 479
DEV LEL+ + PT+ + FS D++WK+TS+DRMQLA++ FAVDD SVS YI+H L
Sbjct: 364 DEVCLELRKTGNDKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHTL 423
Query: 480 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATI 539
LGH V + LP+ +SAP LPDLN+SQV A+K +Q+PLSLIQGPPGTGKTVTSATI
Sbjct: 424 LGHEVQLQPVQSRLPRKWSAPGLPDLNQSQVDAIKSVLQKPLSLIQGPPGTGKTVTSATI 483
Query: 540 VYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI 599
+Y L K +G+ VLVCAPSN+AVDQL E+IHRT LKVVR+ AKSRE ++S VSFLALH Q+
Sbjct: 484 IYHLAKMSGNQVLVCAPSNVAVDQLCERIHRTNLKVVRLTAKSREDVESSVSFLALHEQV 543
Query: 600 RNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
R E NSEL KL QLK + GELSS DEK+++ L K AE+ +L+NADV+CCTCVGAGDPRL
Sbjct: 544 RLSEHNSELVKLSQLKNDVGELSSQDEKKFKQLTKAAEREILNNADVVCCTCVGAGDPRL 603
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
K+KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLF
Sbjct: 604 SKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLF 663
Query: 720 ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
ERL+ L + P RL QYRMHP LS+FPSN FY+GSLQNG+ ++R +DFPWP+ + P
Sbjct: 664 ERLIKLQLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLRKDVDFPWPIAETP 723
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
M+F+ G EEI+ SGTSY+NRTEASNVEK TRF + G+KP +IGVITPYEGQR+++V
Sbjct: 724 MMFWSNLGNEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSEIGVITPYEGQRSYIVT 783
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
MQ G+ + Y+E+EVASVDAFQGREKD I++SCVRSN++QGIGFL+DPRRLNVALTR
Sbjct: 784 TMQNSGTYKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTR 843
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
AKYG++++GNPKVLSK LW+NLL +K++K VEGPL NL+ L+ FS+PK F++ N
Sbjct: 844 AKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRPKVSFRQKN 902
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/899 (56%), Positives = 653/899 (72%), Gaps = 67/899 (7%)
Query: 66 DNSNLNLVS-QKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFC 124
DN +LN V + + L+ + +++ KELPPHAC YCGIH PA V+ C C KWFC
Sbjct: 65 DNDSLNSVPVEGMSGLKLKAVDEE------KELPPHACAYCGIHSPACVVKCLTCNKWFC 118
Query: 125 NGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV 184
+ +G+ + +HI+NHLVRA+HKEV LH D LG+TVLECY CG +N F+LGFIPAK+D+VV
Sbjct: 119 SAKGNGTSTHIVNHLVRARHKEVQLHPDSTLGDTVLECYNCGTKNAFLLGFIPAKSDTVV 178
Query: 185 VLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
VLLCR PCA+ S KDMNWD +W+PLI +R+FL+WLV P++ EQ R R ++ IAKL
Sbjct: 179 VLLCRQPCASSTSTKDMNWDISRWEPLIEERAFLTWLVNAPSDVEQLRARHLSPNTIAKL 238
Query: 245 EEVWKDNAEATFQDLE-KPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQ 303
EE+WK AT L +D+DP VLLR YD
Sbjct: 239 EEMWKVQPSATVASLSIASNIDDDPDPVLLR--------------------YD------- 271
Query: 304 TQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV 363
D Y YQNIFGPLVK+E+DYDK+LKE+Q+++ +
Sbjct: 272 ----------------------------DPYHYQNIFGPLVKMESDYDKKLKEAQSEDGL 303
Query: 364 TVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFG 422
VRWD GLN K + F+L K + GD++L GDE++LRY+ + + W G+G+VIKIP++
Sbjct: 304 IVRWDYGLNNKHLVSFNLHKIESGDVKLAVGDEMRLRYNGELREPWEGVGYVIKIPNSQS 363
Query: 423 DEVGLELKSSAG---APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 479
DEVGLEL+ + PT+ + FS D++WK+TS+DRMQLA++ FAVDD SVS YI+H L
Sbjct: 364 DEVGLELRKTGNDKLVPTDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHTL 423
Query: 480 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATI 539
LGH V + LP+ +S P LP+LN+SQ+ A+K +Q+PLSLIQGPPGTGKTVTSATI
Sbjct: 424 LGHEVQLQPVQSRLPRKWSVPGLPELNQSQIDAIKSVLQKPLSLIQGPPGTGKTVTSATI 483
Query: 540 VYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI 599
+Y L K +G+ VLVCAPSN+AVDQL E+IH T LKVVR+ AKSRE ++S VSFLALH Q+
Sbjct: 484 IYHLAKMSGNQVLVCAPSNVAVDQLCERIHNTNLKVVRLTAKSREDVESSVSFLALHEQV 543
Query: 600 RNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
R E NSEL KL QLK + GELSS DEK+++ L K AE+ +L+NADV+CCTCVGAGDPRL
Sbjct: 544 RLSEHNSELVKLSQLKNDVGELSSQDEKKFKQLTKAAEREILNNADVVCCTCVGAGDPRL 603
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
K+KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLF
Sbjct: 604 SKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLF 663
Query: 720 ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
ERL+ L + P RL QYRMHP LS+FPSN FY+GSLQNG+ ++R ++FPWP+ + P
Sbjct: 664 ERLIKLQLAPIRLTTQYRMHPCLSEFPSNMFYDGSLQNGITHEQRLRRDVEFPWPIAETP 723
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
M+F+ G EEI+ SGTSY+NRTEASNVEK TRF + G+KP +IGVITPYEGQR+++V
Sbjct: 724 MMFWSNLGNEEISTSGTSYLNRTEASNVEKTVTRFFKAGVKPSEIGVITPYEGQRSYIVT 783
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
MQ GS + Y+E+EVASVDAFQGREKD I++SCVRSN++QGIGFL+DPRRLNVALTR
Sbjct: 784 TMQNSGSFKKEYYKEVEVASVDAFQGREKDFIVLSCVRSNENQGIGFLSDPRRLNVALTR 843
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
AKYG++++GNPKVLSK LW+NLL +K++K VEGPL NL+ L+ FS+PK F++ N
Sbjct: 844 AKYGLVILGNPKVLSKHELWHNLLVHFKDRKCFVEGPLTNLQACLLQFSRPKVSFRQKN 902
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/837 (60%), Positives = 622/837 (74%), Gaps = 60/837 (7%)
Query: 124 CNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSV 183
C RG+TS SHI+NHLVRA+HKEV LH + LG+T+LECY CG +N+F+LGFIPAK+D+V
Sbjct: 91 CAARGNTSSSHIVNHLVRARHKEVQLHPESSLGDTILECYNCGTKNVFLLGFIPAKSDTV 150
Query: 184 VVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAK 243
VVLLCR PCAA S KDMNWD +W+PLI DRSFL WLV P++QEQ R R ++ IAK
Sbjct: 151 VVLLCRQPCAAMPSSKDMNWDTSRWQPLIEDRSFLPWLVSSPSDQEQLRARHLSPQMIAK 210
Query: 244 LEEVWKDNAEATFQDLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES 302
LEE+WKDNA AT +DLEK GVD++P VLLR YD
Sbjct: 211 LEEMWKDNAAATVEDLEKATGVDDEPAPVLLR--------------------YD------ 244
Query: 303 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 362
D YQYQN+FGPLVK+EADYD++LKE+Q+Q+
Sbjct: 245 -----------------------------DAYQYQNVFGPLVKIEADYDRKLKEAQSQDG 275
Query: 363 VTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNF 421
+ VRWD+GLN K +A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N
Sbjct: 276 LVVRWDLGLNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGELRPKWDGVGYVIKIPNNQ 335
Query: 422 GDEVGLELKSSA---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHR 478
DEV +EL++ PT+ T F+ D++WK+TSFDRMQLA++ FAVD+ SVS YI+HR
Sbjct: 336 SDEVTIELRTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHR 395
Query: 479 LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSAT 538
LLG+ V R +PK FS LPDLN SQ AVK +Q+PLSLIQGPPGTGKTVTSA
Sbjct: 396 LLGNEVAAGPMRTQMPKKFSVQGLPDLNSSQTNAVKSVLQKPLSLIQGPPGTGKTVTSAN 455
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
I+Y L K G VLVCAPSN+AVDQL E+IHRTGLK VRV AKSRE ++SPV FL+LH Q
Sbjct: 456 IIYNLAKINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQ 515
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
+ N + N EL KL QLK E GELSS DEK+++ L + AEK +L NADVICCTCVGAGDPR
Sbjct: 516 VHNNDSNIELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPR 575
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
L K KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSL
Sbjct: 576 LAKFKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSL 635
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
FERLV+LG P RL VQYRMHP LS+FPSN FY+GSLQNGV ER L +DFPWPV
Sbjct: 636 FERLVILGCAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHN 695
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLV 838
PM+F+ G EEI+ SGTSY+NRTEA+NVEKI TRF + G+KP IG+ITPYEGQR+++V
Sbjct: 696 PMMFWSNLGNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQRSYVV 755
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
MQ G+ ++Y+EIEVASVDAFQGREKD I++SCVRSNDHQGIGFL+DPRRLNVALT
Sbjct: 756 SSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALT 815
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
RAKYG++++GNPKVLSK PLWN LL +KE+ LVEGPL+NL+ SL+ FS+PKQ ++
Sbjct: 816 RAKYGLVILGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQAYR 872
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 1060 bits (2741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/866 (58%), Positives = 643/866 (74%), Gaps = 58/866 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP +AC YCGIH PA V+ C IC KWFC+ RG+++ SHIINHLVRA+HKEV LH +
Sbjct: 87 KELPAYACAYCGIHAPASVVKCLICNKWFCSARGNSTSSHIINHLVRARHKEVQLHPESA 146
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY+CG +N F+LGFIPAK+DSVVVLLCR PCAA S KDMNWD +W+PLI +
Sbjct: 147 LGDTILECYSCGTKNSFLLGFIPAKSDSVVVLLCRQPCAASASNKDMNWDPSRWEPLIKE 206
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
R+FL WLV P+E EQ R R ++ IA+LEE+WK AT DL+K +D+DP V+L
Sbjct: 207 RAFLDWLVSAPSEAEQLRARHMSPNTIARLEEMWKLEPNATISDLDKDQTIDDDPKPVIL 266
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+YED + YQNIFGPLVK+E+DYDK+LKE+Q+++N+TV W +GLN K +A F+L K
Sbjct: 267 KYEDAFHYQNIFGPLVKMESDYDKKLKEAQSEDNLTVEWSLGLNNKHLATFNLRKI---- 322
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
E+ V+ VG
Sbjct: 323 ---------------------------ESGEVKLAVG----------------------- 332
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE+ LRY+ + + W G+G+V+KIP++ DEV LEL+ + PT+ + FS D++WK
Sbjct: 333 DEMLLRYNGELREPWQGVGYVMKIPNSQSDEVCLELRKTGNDRSNPTDLSHNFSADYVWK 392
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TS+DRMQLA++ FAVDD SVS +I+H LLGH+V + +LPK +SAP LPDLN+SQV
Sbjct: 393 ATSYDRMQLAMKTFAVDDMSVSGFIFHTLLGHDVHLQPMKSNLPKKWSAPGLPDLNQSQV 452
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ +Q+PLSLIQGPPGTGKTVTSATI+Y L K +G+ VLVCAPSN+AVDQL E+IHR
Sbjct: 453 DAIRSVLQKPLSLIQGPPGTGKTVTSATIIYHLSKMSGNQVLVCAPSNVAVDQLCERIHR 512
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLKVVR+ AKSRE ++S VSFLALH Q+R E NSE KL QLK E GEL S DEK++R
Sbjct: 513 TGLKVVRLTAKSREDVESSVSFLALHEQVRMSEHNSEFAKLSQLKIEAGELISQDEKKFR 572
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L K AE+ +L NADV+CCTCVGAGDPRL KIKF S+LIDES Q+ EPEC++P++LG KQ
Sbjct: 573 QLTKAAEREILTNADVVCCTCVGAGDPRLSKIKFRSVLIDESTQSAEPECIIPLMLGCKQ 632
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA+AGLSQSLFERL+ L ++P L QYRMHP LS+FPSN F
Sbjct: 633 VVLVGDHKQLGPVIMNKKAAKAGLSQSLFERLMQLRLQPILLNTQYRMHPCLSEFPSNMF 692
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
Y+GSLQNGV ++R +DFPWPV + PM+F+ G EEI+ SGTSY+NRTEASNVEKI
Sbjct: 693 YDGSLQNGVTQEQRIRKDVDFPWPVAEMPMMFWSNIGNEEISTSGTSYLNRTEASNVEKI 752
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G+KP +IGVITPYEGQR+++V MQ G+ +Y+ +EVASVDAFQGREKD
Sbjct: 753 VTRFFKAGVKPAEIGVITPYEGQRSYIVTTMQNSGTSKKDLYKGVEVASVDAFQGREKDF 812
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSN++QGIGFL+DPRRLNVALTRAKYG++++GNP+VLSK LW NLL +++++
Sbjct: 813 IVLSCVRSNENQGIGFLSDPRRLNVALTRAKYGLVILGNPRVLSKHELWYNLLTHFRDRR 872
Query: 931 VLVEGPLNNLKESLILFSKPKQYFKK 956
VEGPLNN ++ L+ FSKP+ + +K
Sbjct: 873 CFVEGPLNNFQQCLLQFSKPRSHRQK 898
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 1059 bits (2739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/898 (56%), Positives = 652/898 (72%), Gaps = 65/898 (7%)
Query: 66 DNSNLNLVS-QKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFC 124
DN +LN V ++ ++ + E++ KELP HAC YCGIH PA V+ C C KWFC
Sbjct: 64 DNDSLNSVPVDQMMGMKLKHPEEE------KELPAHACAYCGIHSPACVVKCLTCNKWFC 117
Query: 125 NGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV 184
+ RG S +HI+NHLVRA+HKEV LH + LG+TVLECY CG +N F+LGFIPAK+D+VV
Sbjct: 118 SARGSGSSTHIVNHLVRARHKEVQLHPESTLGDTVLECYNCGTKNAFILGFIPAKSDAVV 177
Query: 185 VLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
VLLCR PCA+ +S KDMNWD +W+PLI +R+FL WLV P++ EQ R R +T IAKL
Sbjct: 178 VLLCRQPCASVSSNKDMNWDTSRWEPLIEERAFLPWLVNPPSDAEQLRARHLTINTIAKL 237
Query: 245 EEVWKDNAEATFQDLEKPG-VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQ 303
EE+WK +AT QDLEK +D++P V L Y+D Y YQNIFGPLVK+E+DYDK+LKE+Q
Sbjct: 238 EEMWKQEPDATIQDLEKASNIDDEPLPVQLTYDDPYHYQNIFGPLVKMESDYDKKLKEAQ 297
Query: 304 TQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENV 363
+++ +TVRWD LN K IA F+L K E+
Sbjct: 298 SEDGLTVRWDYALNNKHIASFNLQKI-------------------------------ESG 326
Query: 364 TVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGD 423
V+ VG DE++LRY+ + + W G+G+VIKIP++ D
Sbjct: 327 DVKLAVG-----------------------DEMRLRYTGELREPWEGVGYVIKIPNSQSD 363
Query: 424 EVGLELKSSAG---APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLL 480
EV LEL+ + P + + FS D++WK+TS+DRMQLA++ FAVDD SVS YI+H LL
Sbjct: 364 EVCLELRKTGNDKLVPIDLSHNFSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHILL 423
Query: 481 GHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV 540
GH + LPK +SAP LPDLN+ QV A+K +QRPLSLIQGPPGTGKTVTSATI+
Sbjct: 424 GHICQPPPMKVTLPKKWSAPGLPDLNQGQVDAIKAVLQRPLSLIQGPPGTGKTVTSATII 483
Query: 541 YQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR 600
Y L K +GS VLVCAPSN+AVDQL E+IHRTGLKVVR+ AKSRE ++S V+FLALH Q+R
Sbjct: 484 YHLAKTSGSQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVESSVTFLALHEQVR 543
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
E N+EL KL QLK E GELSS DEK+ R L K AE+ +L NADVICCTCVGAGDPRL
Sbjct: 544 MSEHNTELVKLSQLKNEVGELSSQDEKKLRQLTKAAEREILSNADVICCTCVGAGDPRLS 603
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
K+KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL++SLFE
Sbjct: 604 KMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNRSLFE 663
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
RL+ L I P L+ QYRMHP LS+FPSN FY+G+LQNG+ ++R +DFPWPV + PM
Sbjct: 664 RLINLKINPIPLKTQYRMHPCLSEFPSNMFYDGTLQNGITHEQRVRKDVDFPWPVTEMPM 723
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
+F+ G EEI+ SGTSY+NRTEASNVEK TRF + G++P +IGVITPYEGQR+++V
Sbjct: 724 MFWSNIGHEEISTSGTSYLNRTEASNVEKTVTRFFKAGVRPSEIGVITPYEGQRSYIVST 783
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
MQ G+ ++Y+++EVASVDAFQGREKD I++SCVRSND+QGIGFL+DPRRLNVALTRA
Sbjct: 784 MQNSGTYKKEMYKDVEVASVDAFQGREKDFIVLSCVRSNDNQGIGFLSDPRRLNVALTRA 843
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
KYG++++GNPKVLSK LW+NLL +K++K VEGPL NL+ L+ FS+P+ +++ +
Sbjct: 844 KYGLVILGNPKVLSKHELWHNLLAHFKDRKCFVEGPLTNLQACLLQFSRPRVSYRQRS 901
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/849 (58%), Positives = 629/849 (74%), Gaps = 58/849 (6%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
+ELP HAC YCGIH P+ V+ C C KWFC+ RG+T+ SHI+NHLVRA+H+EV LH +
Sbjct: 90 RELPAHACSYCGIHSPSSVVKCLGCNKWFCSARGNTTSSHIVNHLVRARHREVQLHPEST 149
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAKAD+VVVLLCR PCAA S KDM+WD +W+PLI +
Sbjct: 150 LGDTILECYNCGSKNVFLLGFIPAKADTVVVLLCRQPCAASTSSKDMSWDISRWQPLIEE 209
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
R+FL WLV P++ EQ R R +T +AKLEE+WK++ AT DL+K +D+DPH VLL
Sbjct: 210 RAFLPWLVATPSDAEQLRARHLTPNVMAKLEELWKEDMTATVADLDKATSIDDDPHPVLL 269
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+YED +QYQN+FGPLVK+E+DYDK+LKE+Q+++ + +RWD GLN K +A F L K
Sbjct: 270 KYEDPFQYQNVFGPLVKMESDYDKKLKEAQSEDGLQIRWDYGLNGKHLASFELHKI---- 325
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
E+ V+ VG
Sbjct: 326 ---------------------------ESGDVKLAVG----------------------- 335
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG---APTEATTGFSVDFIWK 450
DE++LRY + W G+G+VIKIP+N DEV LEL+ + PTE T FS D++WK
Sbjct: 336 DEMRLRYKGELRPAWEGVGYVIKIPNNHSDEVTLELRKAGNEKTVPTECTHNFSADYVWK 395
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TS+DRMQLA++ FAVDD SVS +I H+LLG +V + +PK F+AP LPDLN+SQ+
Sbjct: 396 ATSYDRMQLAMKTFAVDDNSVSGFIVHKLLGRDVAVAPMKTAMPKKFTAPGLPDLNQSQI 455
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A+K +Q PLSLIQGPPGTGKTVTSATI+Y L K +G VLVCAPSN+AVDQL E+IHR
Sbjct: 456 SAIKAVLQTPLSLIQGPPGTGKTVTSATIIYHLAKSSGGQVLVCAPSNVAVDQLCERIHR 515
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLKVVR+ AKSRE ++S VSFLALH Q+R + N EL KL QLK E GELSS DEK+++
Sbjct: 516 TGLKVVRLTAKSREDVESSVSFLALHEQVRMNDSNGELVKLAQLKTELGELSSQDEKKFK 575
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L K AE+ +L NADV+CCTCVGAGDPRL KIKF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 576 QLTKAAERDILHNADVVCCTCVGAGDPRLSKIKFRNVLIDESTQSAEPECMIPLVLGCKQ 635
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L ++P RL QYRMHP LS+FPSN F
Sbjct: 636 VVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNLRLQPIRLNTQYRMHPCLSEFPSNMF 695
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
Y+GSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEK+
Sbjct: 696 YDGSLQNGVTHAQRLRRDVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEASNVEKV 755
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G+KP+ IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD
Sbjct: 756 VTRFFKAGVKPQDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDF 815
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRS+D+QGIGFL+DPRRLNV LTRAKYG++++GNPKVLSK LW++LL +K++K
Sbjct: 816 IVLSCVRSSDNQGIGFLSDPRRLNVGLTRAKYGLVILGNPKVLSKHELWHHLLVHFKDRK 875
Query: 931 VLVEGPLNN 939
LVEGPL N
Sbjct: 876 CLVEGPLTN 884
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/961 (54%), Positives = 659/961 (68%), Gaps = 123/961 (12%)
Query: 9 SSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNS 68
S Q+L+F +T + + TQ SE D+ D+ S + L SV +I N L
Sbjct: 13 SPQSLSFYNTGQRMQMLDQTQDSELDYLDY-----SSDNDTTLKSVLKIATNAITQLSEE 67
Query: 69 NLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGR- 127
L +V LP HAC+YCG H+P+ V++CN CKKWFCNGR
Sbjct: 68 ELPVV-----------------------LPEHACRYCGYHEPSSVVLCNYCKKWFCNGRL 104
Query: 128 GHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLL 187
+++GSHI+ HLVR++HKEVTLH GPLGETVLECY CG RN+F+LGF+ A +SVVVLL
Sbjct: 105 TNSAGSHIVTHLVRSRHKEVTLHSMGPLGETVLECYNCGCRNVFLLGFVSATTESVVVLL 164
Query: 188 CRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEV 247
CR PCA QNS D +QWKPLI D++F+SWLV +PT +E + R++ A + KLEE+
Sbjct: 165 CRQPCANQNS------DHKQWKPLICDKAFISWLVSIPTLKEMKNTRRIAPADMVKLEEL 218
Query: 248 WKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 307
WK+N E T +DLE P + +P E
Sbjct: 219 WKENPEGTLEDLENPQNEAEP-------------------------------------EA 241
Query: 308 VTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 367
V++R+D + Y+++FGPL+ +EADY+ RLKE+Q+Q+N+TVRW
Sbjct: 242 VSLRYD------------------NAEHYKSVFGPLIFMEADYECRLKEAQSQQNITVRW 283
Query: 368 DVGLNKKSIAYFSLAKTDG----------------DMRLMQGDELKLRYSYDASKTWSGL 411
DVGLNKK IAYFSL K +++LM GDEL+L ++D K W
Sbjct: 284 DVGLNKKRIAYFSLNKISDTGRVSHKSYMQHLNVCEVKLMTGDELRLNSNFDG-KVWRAS 342
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPT-EATTGFSVDFIWKSTSFDRMQLALRKFAVDDQS 470
GHVIK+PDNFG+EVG+EL ++ AP + T G+SVDF+WKSTSFDRM +ALRK DD
Sbjct: 343 GHVIKVPDNFGEEVGIELINAHDAPPPDVTYGYSVDFVWKSTSFDRMFIALRKLT-DDGF 401
Query: 471 VSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGT 530
VS I+ ++LGH+ + PKH+SAP LP+LN SQV AV+ + R +SLIQGPPGT
Sbjct: 402 VSHAIHRKILGHDYEAPPLNILYPKHYSAPGLPELNHSQVMAVREVLTRSISLIQGPPGT 461
Query: 531 GKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV 590
GKTVTSA+IVY L K G+P+LVCAPSN+AV +R+CAKSREAIDSPV
Sbjct: 462 GKTVTSASIVYHLAKAGGTPILVCAPSNVAV--------------IRMCAKSREAIDSPV 507
Query: 591 SFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCT 650
SFLALHNQ+R +E EL KL QLKEETGELSS DE R+R L+ E+ LL +ADV+CCT
Sbjct: 508 SFLALHNQVRYLEGEEELDKLWQLKEETGELSSLDEYRFRFLRSKCERDLLKHADVVCCT 567
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
CV AGDPR I+F ++LIDES QATEPEC++P++ GA+Q+ILVGDHCQLGPVVMCKKAA
Sbjct: 568 CVAAGDPRFNHIRFRAVLIDESTQATEPECLIPIMTGARQVILVGDHCQLGPVVMCKKAA 627
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
RAGL+QSLFERLV+LG RP RL+VQYRMHP LS PSN FYEG+LQNGV ER L +D
Sbjct: 628 RAGLNQSLFERLVILGNRPIRLQVQYRMHPLLSSLPSNLFYEGTLQNGVTEQERILEGVD 687
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
F WP P PM F+ T QEEI+ SGTS++NR EA+++EKI T+F+R G++ +QIG+ITPY
Sbjct: 688 FRWPNPTVPMFFWCTASQEEISSSGTSFLNRAEAAHIEKIATKFLRSGIRADQIGIITPY 747
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
EGQRA++VQHM G L K+YQEIEVASVDAFQGREKD+I++SCVRSN+H GIGFLNDP
Sbjct: 748 EGQRAYIVQHMLLSGPLNNKLYQEIEVASVDAFQGREKDIILLSCVRSNEHSGIGFLNDP 807
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
RRLNVALTRA+YG+I++GNPKVLS+QP+W++LL F +E L++GPLN LKE + F+K
Sbjct: 808 RRLNVALTRARYGLIIVGNPKVLSRQPMWHSLLRFCRENHCLLDGPLNALKEYKVDFNKG 867
Query: 951 K 951
K
Sbjct: 868 K 868
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/866 (58%), Positives = 637/866 (73%), Gaps = 67/866 (7%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC YCG+HDPA V+ C KWFCN RG+TSGSHII HLVR+K+KEV LH D P
Sbjct: 92 KELPAHACAYCGLHDPASVVKCVASDKWFCNSRGNTSGSHIIQHLVRSKNKEVALHPDSP 151
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LGETVLECY CG RN+F+LGFIPAK DSVVVLLCR PC N+LKDM+WD QW PLI D
Sbjct: 152 LGETVLECYNCGCRNVFLLGFIPAKQDSVVVLLCRDPCLQMNALKDMSWDMSQWLPLIED 211
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLR 274
RSFLSWLVK+PTE EQ R RQ++++QIAKLEE+W++N AT +D+++PGVD++ VL R
Sbjct: 212 RSFLSWLVKIPTEYEQLRARQISASQIAKLEEMWRENPLATLEDVDRPGVDDEVAPVLER 271
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD DGY
Sbjct: 272 --------------------YD-----------------------------------DGY 276
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGD 394
YQNIF PLVK+E+DYD+++KE+QTQ+NV VRWD+GLNKK A FS + D ++RL+ GD
Sbjct: 277 HYQNIFAPLVKMESDYDRKMKEAQTQDNVHVRWDLGLNKKRNAIFSCNRPDSEIRLVPGD 336
Query: 395 ELKLRYSYDA----SKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWK 450
E++LR + W G GHV++I ++ EV +E++++ P E T GF VDF+WK
Sbjct: 337 EIRLRLGPSSILLYGGEWEGSGHVLRIEES---EVTMEMRNNV-VPVEITDGFLVDFVWK 392
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC--HLPKHFSAPNLPDLNRS 508
+TSFDRMQ AL+ FAVDD S++ Y+YH++LGH+VD R + AP LP+LN
Sbjct: 393 ATSFDRMQAALKTFAVDDTSLTGYLYHKILGHDVDMQALRVPRSIDTKLLAPGLPELNPP 452
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
Q+ AVK + +PLSLIQGPPGTGKTVTSA+IVY + +Q VLV APSNIAVD LT KI
Sbjct: 453 QMEAVKGVLSQPLSLIQGPPGTGKTVTSASIVYHMSRQNMGQVLVTAPSNIAVDHLTAKI 512
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM--NSELKKLLQLKEETGELSSADE 626
GLKVVR+ AKSREA+ V L+LH ++ + +EL+KL+QLK + GELSS DE
Sbjct: 513 SAIGLKVVRLAAKSREAVSCSVEHLSLHTMVKLLTSPDKAELRKLMQLKNDQGELSSQDE 572
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
K+++ LK+ AE+ +L ADVIC TCVGAGDPRL +F +LIDE+ QATEPEC++P++
Sbjct: 573 KKFKSLKRQAEREILQAADVICTTCVGAGDPRLSNFRFRQVLIDEATQATEPECLIPIVQ 632
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
GAK +++VGDHCQLGPVVM K+AA AGL+QSLF+RL+ L RPFRL VQYRMHP LS+FP
Sbjct: 633 GAKHVVMVGDHCQLGPVVMNKRAASAGLNQSLFDRLLKLDHRPFRLRVQYRMHPCLSEFP 692
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN 806
SN FYEG LQNGV + ER+L +DFPWP P+KP FY+ G EEI+ SGTSY+NRTEASN
Sbjct: 693 SNTFYEGELQNGVSSTERQLKNVDFPWPNPNKPTFFYICLGAEEISSSGTSYLNRTEASN 752
Query: 807 VEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGR 866
VEKI T F++CG+ P QIGVITPYEGQRA++V +MQ GS+ A++Y+++EVASVD+FQGR
Sbjct: 753 VEKIVTAFLKCGVLPAQIGVITPYEGQRAYVVNYMQRNGSMRAQLYKDVEVASVDSFQGR 812
Query: 867 EKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFY 926
EKDLII+SCVRSN++QGIGFL+D RRLNVALTRAKYG+I++GNP+VL+KQ LWN LLN Y
Sbjct: 813 EKDLIILSCVRSNENQGIGFLSDRRRLNVALTRAKYGVIILGNPRVLAKQELWNRLLNHY 872
Query: 927 KEQKVLVEGPLNNLKESLILFSKPKQ 952
++ +++VEGPL+NL+ S + F KPKQ
Sbjct: 873 RDHQLVVEGPLSNLQPSFMQFPKPKQ 898
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/617 (78%), Positives = 546/617 (88%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLM
Sbjct: 7 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLM 66
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
QGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKS
Sbjct: 67 QGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKS 126
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
TSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVY
Sbjct: 127 TSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVY 186
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT 571
AVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+T
Sbjct: 187 AVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQT 246
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM 631
GLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR
Sbjct: 247 GLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRA 306
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQL
Sbjct: 307 LKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQL 366
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FY
Sbjct: 367 ILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFY 426
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKIT
Sbjct: 427 EGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKIT 486
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD I
Sbjct: 487 TKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFI 546
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
I+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKV
Sbjct: 547 ILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKV 606
Query: 932 LVEGPLNNLKESLILFS 948
LVEGPLNNL+ESL+ FS
Sbjct: 607 LVEGPLNNLRESLMQFS 623
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/617 (78%), Positives = 546/617 (88%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLM
Sbjct: 8 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLM 67
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
QGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKS
Sbjct: 68 QGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKS 127
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
TSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVY
Sbjct: 128 TSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVY 187
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT 571
AVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+T
Sbjct: 188 AVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQT 247
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM 631
GLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGELSSADEKRYR
Sbjct: 248 GLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRA 307
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQL
Sbjct: 308 LKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQL 367
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FY
Sbjct: 368 ILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFY 427
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKIT
Sbjct: 428 EGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKIT 487
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD I
Sbjct: 488 TKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFI 547
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
I+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKV
Sbjct: 548 ILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKV 607
Query: 932 LVEGPLNNLKESLILFS 948
LVEGPLNNL+ESL+ FS
Sbjct: 608 LVEGPLNNLRESLMQFS 624
>gi|298707435|emb|CBJ30064.1| RNA helicase [Ectocarpus siliculosus]
Length = 1101
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/932 (55%), Positives = 656/932 (70%), Gaps = 85/932 (9%)
Query: 44 SQTQASQLDSVNQIQVNGKQNLDNSNLNLVSQKLH--------------ELQFEE-EEDD 88
S + +LDS + Q G++ D + + L L+ EE E D
Sbjct: 82 SHAPSMELDSASAYQSYGQEEGDTGGVTTGFEGLRLGDEPRGGREGAMSMLEGEEGERAD 141
Query: 89 GNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVT 148
G+ + E P AC++CGIHDPA V+ C KWFCN G+ SGSHII HLVR+++ +V
Sbjct: 142 GDYAKDVEAPEWACRFCGIHDPACVVRCVESGKWFCNSCGNASGSHIIQHLVRSRNNQVC 201
Query: 149 LHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQW 208
LH D PLGET+LECY CG RN+F++GF+PAKADSVVVLLCR LKDM WD +W
Sbjct: 202 LHPDSPLGETILECYNCGSRNLFLMGFVPAKADSVVVLLCRVCVEGAPGLKDMGWDLSEW 261
Query: 209 KPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDP 268
PL+ DR FL WLVKVP+EQ+Q R R ++SAQIAKLEE+W EAT +DLEKPG+D++
Sbjct: 262 LPLVQDRRFLPWLVKVPSEQQQSRARHISSAQIAKLEELWNKEPEATLEDLEKPGIDDEA 321
Query: 269 HQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK 328
VLL+YEDGY YQNI PLVKLEADYDK K+SQ Q+ ++VRWD GLNKK IA F LA
Sbjct: 322 QPVLLKYEDGYHYQNIMAPLVKLEADYDKSSKDSQGQDGLSVRWDQGLNKKHIALFRLA- 380
Query: 329 TDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDM 388
Q++E++
Sbjct: 381 -----------------------------QSEEHMA------------------------ 387
Query: 389 RLMQGDELKLRYSYDA------SKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG 442
R+ GDELKL S D K W GLGHV++I D+ EV L + PTE T G
Sbjct: 388 RMTAGDELKL--SLDPVGQRAHGKPWEGLGHVLRIADS---EVALMMLGGM-VPTEITDG 441
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+ VDF+WK+ S+DRMQ+AL+ FAVDD SVS YIYHRLLGH V+ + R LP FSAP L
Sbjct: 442 YQVDFVWKAVSYDRMQVALKTFAVDDTSVSGYIYHRLLGHEVEPQVLRVTLPPRFSAPGL 501
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
P+LN SQ AVK +QRPLSLIQGPPGTGKTVTSAT+VY L +Q VLVCAPSN+AVD
Sbjct: 502 PELNHSQFTAVKAVLQRPLSLIQGPPGTGKTVTSATLVYHLARQGMGQVLVCAPSNVAVD 561
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM--NSELKKLLQLKEETGE 620
LT KI TGL+VVR+CAKSREA+ + V L+LH +R ++ +L+KL LK+E GE
Sbjct: 562 HLTAKISATGLRVVRLCAKSREAVSTDVDHLSLHVMVRALDTPDKQDLRKLQLLKDELGE 621
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFHSILIDESMQATEP 678
L +ADEKR+R L+ +AE+ +L ADVIC TCVGAGDPRL + ++F +LIDE+ QA E
Sbjct: 622 LVAADEKRFRRLRSSAEREILQAADVICTTCVGAGDPRLSNVNLRFRQVLIDEATQAMEA 681
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 738
EC++P+++GAKQL+LVGDHCQLGPVV+CKK+++AGL+QSLFERLV+LGIRP RL+VQYRM
Sbjct: 682 ECLIPIVMGAKQLVLVGDHCQLGPVVLCKKSSKAGLTQSLFERLVLLGIRPVRLQVQYRM 741
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSY 798
HP LS++PSN FYEG+LQNGV ER + ++DFPWPVP KPM F +T G EEI+ SGTSY
Sbjct: 742 HPCLSEWPSNMFYEGTLQNGVTEGERVMDQVDFPWPVPSKPMFFLMTTGVEEISSSGTSY 801
Query: 799 VNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVA 858
+NRTEA+ VEK TRF++ G+ P+QIGV+TPYEGQR++LV H+Q GSL + +Y EIEVA
Sbjct: 802 LNRTEATAVEKCVTRFLQKGVTPDQIGVVTPYEGQRSYLVDHLQRTGSLRSSLYSEIEVA 861
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
SVD+FQGREKDLI+++CVRSN+HQGIGFL+DPRRLNVALTRA++G I+IGNP++L+K PL
Sbjct: 862 SVDSFQGREKDLILLTCVRSNEHQGIGFLSDPRRLNVALTRARFGCIIIGNPRILAKNPL 921
Query: 919 WNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
WN L+NFYK+ + LVEGPL+N++ SL+ F P
Sbjct: 922 WNALVNFYKDHECLVEGPLDNMQPSLMSFPPP 953
>gi|116197821|ref|XP_001224722.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178345|gb|EAQ85813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1071
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/866 (57%), Positives = 624/866 (72%), Gaps = 82/866 (9%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC RG++S SHI+NHLVRA+HKEV LH
Sbjct: 95 KELPAHACA----------------------ARGNSSSSHIVNHLVRARHKEVQLHPQSS 132
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W+PLI D
Sbjct: 133 LGDTILECYNCGTKNVFMLGFIPAKSDTVVVLLCRQPCAASTSTKDMSWDISRWQPLIED 192
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLL 273
RSFL+WLV+ PT+ EQ R R +T IAKLEE+WK+ AT DLEK GVD+DPH VLL
Sbjct: 193 RSFLNWLVQPPTDTEQLRARHLTPPMIAKLEEMWKETPGATVADLEKSAGVDDDPHPVLL 252
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 253 K--------------------YD-----------------------------------DP 257
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
Y YQNIFGPLVK+E+DYDK+LKE+Q+++N+ VRWDVGLN K++A F L K + GD++L
Sbjct: 258 YHYQNIFGPLVKMESDYDKKLKEAQSEDNLQVRWDVGLNNKNVASFILPKIESGDVKLAV 317
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIW 449
GDE++L+Y D W G+G+VIKIP+N DEV LEL+ S PT+ T FS D++W
Sbjct: 318 GDEMRLKYKGDLRTPWEGVGYVIKIPNNQSDEVTLELRKSGNDKSVPTDVATNFSADYVW 377
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQ A++ FAVD+ S+S YI+H+LLGH V + +PK F LP+LN SQ
Sbjct: 378 KATSYDRMQFAMKTFAVDEMSLSGYIFHKLLGHEVAVAPMKTQMPKKFHVAGLPELNHSQ 437
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ A+K + PLSLIQGPPGTGKTVTSATI+Y L K S VLVCAPSN+AVDQL E+IH
Sbjct: 438 ITAIKTVLSNPLSLIQGPPGTGKTVTSATIIYHLAKINNSQVLVCAPSNVAVDQLCERIH 497
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RTGLKVVR+ AKSRE ++S VSFLALH Q+R + N+EL KL +LK + GELSS DEK++
Sbjct: 498 RTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDSNTELTKLARLKADQGELSSQDEKKF 557
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L+NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 558 KQLTRAAEREILNNADVVCCTCVGAGDPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCK 617
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L P RL VQYRMHP LSKFPSN
Sbjct: 618 QVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLNFTPIRLNVQYRMHPCLSKFPSNM 677
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FY+GSLQNGV ER + +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEA+NVEK
Sbjct: 678 FYDGSLQNGVTVSERLRTDVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEAANVEK 737
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF++ G+K IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD
Sbjct: 738 IVTRFLKAGVKALDIGVITPYEGQRSYIVSTMQNTGTFKKETYKEVEVASVDAFQGREKD 797
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSND+QGIGFL+DPRRLNVALTRAKYG+++IGNPKVLSK LW++LL +K+
Sbjct: 798 FIVLSCVRSNDNQGIGFLSDPRRLNVALTRAKYGLVIIGNPKVLSKHELWHHLLVHFKDC 857
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFK 955
K LVEGPL NL+ SL+ FS+PK F+
Sbjct: 858 KCLVEGPLTNLQTSLLQFSRPKTAFR 883
>gi|326469176|gb|EGD93185.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1064
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/823 (60%), Positives = 607/823 (73%), Gaps = 60/823 (7%)
Query: 138 HLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNS 197
H A+HKEV LH LG+T+LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S
Sbjct: 93 HACGARHKEVQLHPASSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPS 152
Query: 198 LKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQ 257
KDMNWD +W+PL+ DRSFL WLV P++QEQ R R ++ IAKLEE+WK+NA AT +
Sbjct: 153 SKDMNWDTSRWQPLMEDRSFLPWLVSAPSDQEQLRARHLSPQMIAKLEELWKENASATVE 212
Query: 258 DLEKP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGL 316
DLEK VD++P VLLR YD
Sbjct: 213 DLEKATNVDDEPAPVLLR--------------------YD-------------------- 232
Query: 317 NKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 376
D YQYQN+FGPLVK+EADYD++LKE+Q+Q+ + VRWD+GLN K +
Sbjct: 233 ---------------DAYQYQNVFGPLVKIEADYDRKLKEAQSQDGLAVRWDLGLNNKHL 277
Query: 377 AYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA-- 433
A F L K + GD++L GDE++L+Y+ + W G+G+VIKIP+N DEV +EL+S
Sbjct: 278 ASFVLPKLELGDVKLAVGDEMRLKYAGELRPKWEGVGYVIKIPNNQSDEVTIELRSKGDH 337
Query: 434 -GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
PTE + F+ D++WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V +
Sbjct: 338 KSVPTEISHNFTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQ 397
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
+PK FS P LP LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K VL
Sbjct: 398 MPKQFSVPGLPGLNSSQINAVKAVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNAGQVL 457
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSN+AVDQL E IHRTGLK VRV AKSRE ++SPV L+LH Q+RN + N EL KL
Sbjct: 458 VCAPSNVAVDQLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNIELVKLN 517
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QLK E GELSS DEK+Y+ L + AEK +L NADVICCTCVGAGDPRL K KF ++LIDES
Sbjct: 518 QLKTELGELSSQDEKKYKQLTRAAEKEILTNADVICCTCVGAGDPRLAKSKFRTVLIDES 577
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
Q+ EPECM+P++LG KQ +LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL
Sbjct: 578 TQSAEPECMIPLVLGCKQAVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRL 637
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
VQYRMHP LS+F SN FYEGSLQNGV +++R L +DFPWPV DKPM+F+ G EEI+
Sbjct: 638 NVQYRMHPCLSQFSSNMFYEGSLQNGVSSEDRLLKNVDFPWPVADKPMMFWSNLGNEEIS 697
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+NRTEA+NVEKI TRF + G+KP IG+ITPYEGQR+++V MQ G+ + Y
Sbjct: 698 ASGTSYLNRTEAANVEKIVTRFFKAGVKPSGIGIITPYEGQRSYVVSSMQLTGTFKKEWY 757
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
+EIEVASVDAFQGREKD I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKV
Sbjct: 758 KEIEVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKV 817
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
LSK PLWN LL +KEQ LVEGPL+NL+ SLI FS+PKQ ++
Sbjct: 818 LSKHPLWNYLLRHFKEQNCLVEGPLSNLQTSLIQFSRPKQAYR 860
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/889 (55%), Positives = 628/889 (70%), Gaps = 68/889 (7%)
Query: 70 LNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGH 129
+N +L LQ E+++ +C YCG+ +P+ ++ C C KWFCN RGH
Sbjct: 25 VNFTMNELSHLQVSEDQEH-----------ESCAYCGLSNPSAIVKCLHCNKWFCNSRGH 73
Query: 130 TSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCR 189
TS SHI+ HLVRA+HK+V+LHK+ PLGETVLECY CG RN+F+LG IPAK+D+V+VLLCR
Sbjct: 74 TSASHIVTHLVRARHKQVSLHKNSPLGETVLECYNCGTRNVFLLGLIPAKSDTVIVLLCR 133
Query: 190 TPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWK 249
PC + KDMNWD QW+PLI DR FL WLV T++E+ R +TS QI++LEE+W
Sbjct: 134 QPCTKVSLAKDMNWDVSQWQPLITDRQFLPWLVLPATKEEEMAARPITSQQISRLEELWH 193
Query: 250 DNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVT 309
+NA A+ +DLEKP V E+ V LR+ D YQ F PLV++EA+YDK+LKESQTQ +V
Sbjct: 194 ENANASLEDLEKPTVSENLPSVDLRFPDARAYQAAFSPLVQVEAEYDKKLKESQTQNDVV 253
Query: 310 VRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 369
VRWD LN++ A+F L K +
Sbjct: 254 VRWDQSLNQRYTAWFYLPKLES-------------------------------------- 275
Query: 370 GLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLEL 429
LA +D +M+L RY + WS G+VIKIP+N DEVGLEL
Sbjct: 276 -------GEIRLAVSD-EMKL--------RYEGELRPKWSSTGYVIKIPNNISDEVGLEL 319
Query: 430 KSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF 489
S P E T FSVD++WKSTSFDRMQ AL+ FA D+ +S Y+YH+LLGH V +
Sbjct: 320 NRSDKIPIECTHNFSVDYVWKSTSFDRMQAALKSFATDNSRLSGYLYHKLLGHEVPPLTL 379
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT-- 547
+ LP FS PNLP+LN SQV AV+ + +PLSLIQGPPGTGKTVTSA+IVY L QT
Sbjct: 380 KTKLPTTFSVPNLPELNSSQVNAVRSVLTQPLSLIQGPPGTGKTVTSASIVYHLATQTKG 439
Query: 548 -GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS 606
GS VLVCAPSN+AVDQL EKIH+TGL+VVRV AKSRE IDSPVSFL+LH Q++N E N
Sbjct: 440 NGSAVLVCAPSNVAVDQLAEKIHQTGLRVVRVTAKSREDIDSPVSFLSLHEQVKNYEGNE 499
Query: 607 ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
E +LL+L+ + GELS ADEKR R+L + E+ LL +A+VICCTCVGAGD R+ K++F +
Sbjct: 500 EFSRLLKLQNDVGELSLADEKRLRVLVASIERELLQSANVICCTCVGAGDKRVSKLRFRA 559
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG 726
+LIDE+ QA+EPECM+P+ KQ++LVGDH QLGPVVM KKAA+AGLSQSLFERL++LG
Sbjct: 560 VLIDEATQASEPECMIPLTHVYKQVVLVGDHQQLGPVVMNKKAAQAGLSQSLFERLIILG 619
Query: 727 IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ 786
P RL VQYRMHP LS+FPSN FYEG+LQNGV ER +DFPWP P++P++FY
Sbjct: 620 NSPIRLTVQYRMHPCLSEFPSNMFYEGTLQNGVTTAERLARYLDFPWPQPEEPLMFYANF 679
Query: 787 GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGS 846
GQEEI+ SGTSY+NRTEAS EKI T+F + G+ PEQIG+ITPY+GQR+++VQ+MQ G+
Sbjct: 680 GQEEISASGTSYLNRTEASTCEKIVTQFFKAGVTPEQIGIITPYDGQRSYIVQYMQNNGA 739
Query: 847 LPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
L +Y+ +EVASVDAFQGREKD II+SCVRS++HQGIGFL++PRRLNVALTRA+YG+IV
Sbjct: 740 LKKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFLSEPRRLNVALTRARYGVIV 799
Query: 907 IGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
+GNPKVL+K LW + + +E+ LVEGPLNNL++ ++ + P + K
Sbjct: 800 LGNPKVLAKHALWYHFIVHCRERGYLVEGPLNNLQKFMLGLAPPIKPLK 848
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/866 (56%), Positives = 618/866 (71%), Gaps = 88/866 (10%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
+ELP HAC YCGIH P+ V+ C C KWFC+ RG+T+ SHI+NHLVRA+H+EV LH +
Sbjct: 90 RELPAHACSYCGIHSPSSVVKCLGCNKWFCSARGNTTSSHIVNHLVRARHREVQLHPEST 149
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+T+LECY CG +N+F+LGFIPAKAD+VV
Sbjct: 150 LGDTILECYNCGSKNVFLLGFIPAKADTVV------------------------------ 179
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
R+FL WLV P++ EQ R R +T +AKLEE+WK++ AT DL+K +D+DPH VLL
Sbjct: 180 RAFLPWLVATPSDAEQLRARHLTPNVMAKLEELWKEDMTATVADLDKATSIDDDPHPVLL 239
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+YED +QYQN+FGPLVK+E+DYDK+LKE+Q+++ + +RWD GLN K +A F L K
Sbjct: 240 KYEDPFQYQNVFGPLVKMESDYDKKLKEAQSEDGLQIRWDYGLNGKHLASFELHKI---- 295
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
E+ V+ VG
Sbjct: 296 ---------------------------ESGDVKLAVG----------------------- 305
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG---APTEATTGFSVDFIWK 450
DE++LRY + W G+G+VIKIP+N DEV LEL+ + PTE T FS D++WK
Sbjct: 306 DEMRLRYKGELRPAWEGVGYVIKIPNNHSDEVTLELRKAGNEKTVPTECTHNFSADYVWK 365
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TS+DRMQLA++ FAVDD SVS +I H+LLG +V + +PK F+AP LPDLN+SQ+
Sbjct: 366 ATSYDRMQLAMKTFAVDDNSVSGFIVHKLLGRDVAVAPMKTAMPKKFTAPGLPDLNQSQI 425
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A+K +Q PLSLIQGPPGTGKTVTSATI+Y L K +G VLVCAPSN+AVDQL E+IHR
Sbjct: 426 SAIKAVLQTPLSLIQGPPGTGKTVTSATIIYHLAKSSGGQVLVCAPSNVAVDQLCERIHR 485
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
TGLKVVR+ AKSRE ++S VSFLALH Q+R + N EL KL QLK E GELSS DEK+++
Sbjct: 486 TGLKVVRLTAKSREDVESSVSFLALHEQVRMNDSNGELVKLAQLKTELGELSSQDEKKFK 545
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L K AE+ +L NADV+CCTCVGAGDPRL KIKF ++LIDES Q+ EPECM+P++LG KQ
Sbjct: 546 QLTKAAERDILHNADVVCCTCVGAGDPRLSKIKFRNVLIDESTQSAEPECMIPLVLGCKQ 605
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPV+M KKAA+AGL+QSLFERLV L ++P RL QYRMHP LS+FPSN F
Sbjct: 606 VVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVNLRLQPIRLNTQYRMHPCLSEFPSNMF 665
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
Y+GSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NRTEASNVEK+
Sbjct: 666 YDGSLQNGVTHAQRLRRDVDFPWPVADTPMMFWSNLGNEEISASGTSYLNRTEASNVEKV 725
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF + G+KP+ IGVITPYEGQR+++V MQ G+ + Y+E+EVASVDAFQGREKD
Sbjct: 726 VTRFFKAGVKPQDIGVITPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDF 785
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRS+D+QGIGFL+DPRRLNV LTRAKYG++++GNPKVLSK LW++LL +K++K
Sbjct: 786 IVLSCVRSSDNQGIGFLSDPRRLNVGLTRAKYGLVILGNPKVLSKHELWHHLLVHFKDRK 845
Query: 931 VLVEGPLNNLKESLILFSKPKQYFKK 956
LVEGPL NL+ SL+ F KPK +++
Sbjct: 846 CLVEGPLTNLQSSLLQFGKPKTPYRQ 871
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/867 (56%), Positives = 614/867 (70%), Gaps = 65/867 (7%)
Query: 88 DGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEV 147
D ++ +LP HACKYCGIH PA V+ C C+KWFCN T+ SHI++HLVRAKHK+V
Sbjct: 140 DAHDELMHDLPEHACKYCGIHSPASVVCCLKCRKWFCNASHGTAASHIVHHLVRAKHKDV 199
Query: 148 TLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQ 207
LHKD P+G+ LECY CG RN+FVLGFIPAKADSVV+LLCR PCA KD NWD
Sbjct: 200 GLHKDSPIGDEKLECYNCGCRNVFVLGFIPAKADSVVMLLCRQPCAGAVLSKDTNWDLST 259
Query: 208 WKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDED 267
W+PLI +R FL WLV VPTE E+QR R + S+++ KLEE+WK N AT +DL +PG+DE+
Sbjct: 260 WEPLIKERVFLPWLVSVPTEAEKQRSRHLNSSEVQKLEELWKTNPSATLEDLSQPGLDEE 319
Query: 268 PHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 327
P E V +R++
Sbjct: 320 P-------------------------------------EKVKLRYE-------------- 328
Query: 328 KTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 387
D Y YQNIFGPLVKLEADYDK+ KESQ RW VGLNKK A+F L + DGD
Sbjct: 329 ----DAYSYQNIFGPLVKLEADYDKQTKESQASLEGCCRWGVGLNKKITAHFVLPRQDGD 384
Query: 388 MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDF 447
R + GDEL+LRY+ + + W+G GHV+ +P + + + LEL SS G PT T F VDF
Sbjct: 385 YRTVHGDELRLRYAGELGRPWAGEGHVLVLPGSTTEGITLELWSSNGVPTHLTHNFHVDF 444
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV---DEVLFRCHLPKHFSAPNLPD 504
+WKST+FDRMQ AL+ FAVD++ VS+YI+H+LLG V DE R +P++ +APNLP
Sbjct: 445 VWKSTTFDRMQAALKTFAVDEKCVSSYIFHKLLGKEVELKDE--HRVSVPENLNAPNLPK 502
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQ+ A+ ++ P SLIQGPPGTGKTVTSAT+VY L K VLVCAPSNIAVDQL
Sbjct: 503 LNESQMSAITRVLREPFSLIQGPPGTGKTVTSATLVYHLSK--FGQVLVCAPSNIAVDQL 560
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSA 624
TE+IHRTGLKVVR+ AKSREAI+S VSFLALH+QIRN + EL KL+QL+EE L
Sbjct: 561 TERIHRTGLKVVRLAAKSREAIESSVSFLALHSQIRNSAAHPELAKLMQLREEQNGLDDV 620
Query: 625 DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPV 684
DE+R+R LK AE+ L NADVIC TCVGAGDPRL +++F ++L+DE+ QATEPE ++P+
Sbjct: 621 DERRFRQLKFAAERDFLKNADVICTTCVGAGDPRLARMRFRAVLVDEATQATEPEAIIPI 680
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
++GAKQ++LVGDHCQLGPVVMCKKAA+A +QSLFERLV+ RP RLE+QYRMHP LS
Sbjct: 681 VMGAKQVVLVGDHCQLGPVVMCKKAAKANFTQSLFERLVMGQNRPIRLEIQYRMHPCLSA 740
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEA 804
FPS+ FYEGSLQNGV A +R F WP P+ PM F+ GQEE++ SGTSY+NR EA
Sbjct: 741 FPSDTFYEGSLQNGVLAADRTPKTPAFTWPDPNNPMFFWSNLGQEELSASGTSYLNRAEA 800
Query: 805 SNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
S+VEK+ T+ ++ G KP+QIGVITPYEGQRAF++Q M G L +++YQ+IEVASVDAFQ
Sbjct: 801 SSVEKLVTQLLKSGTKPDQIGVITPYEGQRAFILQTMTANGVLRSQLYQQIEVASVDAFQ 860
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
GREKD II+SCVRS GIGFLNDPRRLNVALTRA+YG++VIGN L++ PLWN ++
Sbjct: 861 GREKDYIILSCVRS---AGIGFLNDPRRLNVALTRARYGLVVIGNAHRLARDPLWNEVIT 917
Query: 925 FYKEQKVLVEGPLNNLKESLILFSKPK 951
+++ K+ +EG L L++ + P+
Sbjct: 918 YFRNHKLFMEGSLTALRDCGMRIPNPE 944
>gi|414590338|tpg|DAA40909.1| TPA: hypothetical protein ZEAMMB73_069756 [Zea mays]
Length = 889
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/801 (60%), Positives = 591/801 (73%), Gaps = 62/801 (7%)
Query: 87 DDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKH 144
+DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSGSHI+NHLVRAKH
Sbjct: 143 EDGYDYSKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 202
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
KEV LHKD PLGET+LECY CG RN+F+LGFI AKA++VVVLLCR PC + N+LKDMNWD
Sbjct: 203 KEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKAENVVVLLCREPCLSVNALKDMNWD 262
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
QW PLI DR FLSWLVKVP+EQEQ R RQ+++ QI K+EE+WK N +A+ +DLEKPGV
Sbjct: 263 LSQWCPLIDDRCFLSWLVKVPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGV 322
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P V+L+YED YQYQN+F PL+KLEADYDK +KESQ+++NVTVRWD+GLNKK +AYF
Sbjct: 323 DDEPQPVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRVAYF 382
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW-DVGLNKKSIAYFSLAK 383
K D + ++L + RL+ + T W VG K A +A
Sbjct: 383 VFPKEDNE-----------LRLVPGDELRLRYPGDSSHPT--WQSVGHVIKLTAQEEVAL 429
Query: 384 TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGF 443
++R QG +L + W
Sbjct: 430 ---ELRASQGVPTELNVGFSVDFVW----------------------------------- 451
Query: 444 SVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 503
KSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP
Sbjct: 452 ------KSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLP 505
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ VLVCAPSN+AVDQ
Sbjct: 506 ELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 565
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETGEL 621
L EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SEL KL QLK+E GEL
Sbjct: 566 LAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL 625
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
SS+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LIDES QATEPEC+
Sbjct: 626 SSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECL 685
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPE 741
+P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++PFRL+VQYRMHP
Sbjct: 686 IPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQVQYRMHPC 745
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
LS+FPSN FYEG+LQNGV +ER+ S IDFPWPVP++PM FYV GQEEI+ SGTSY+NR
Sbjct: 746 LSEFPSNCFYEGTLQNGVTVNERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNR 805
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
TEA+NVEKI T F+R G+ P QIGVITPYEGQRA++V +M GSL ++Y+EIEVASVD
Sbjct: 806 TEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVD 865
Query: 862 AFQGREKDLIIMSCVRSNDHQ 882
+FQGREKD II+SCVRSN+HQ
Sbjct: 866 SFQGREKDYIILSCVRSNEHQ 886
>gi|19113992|ref|NP_593080.1| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe 972h-]
gi|19924241|sp|Q09820.2|RENT1_SCHPO RecName: Full=ATP-dependent helicase upf1; AltName:
Full=Nonsense-mediated mRNA decay protein upf1; AltName:
Full=Regulator of nonsense transcripts 1 homolog;
AltName: Full=Up-frameshift suppressor 1
gi|4894186|emb|CAA91194.2| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe]
Length = 925
Score = 993 bits (2566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/899 (54%), Positives = 621/899 (69%), Gaps = 70/899 (7%)
Query: 68 SNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGR 127
S+ N+ S+ E QFEE K+ C YC I +P ++ C C KWFCN R
Sbjct: 16 SSKNMTSENGLEHQFEEL------LVEKQYSEEHCAYCHIKNPNSILKCLHCNKWFCNVR 69
Query: 128 GHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLL 187
G + SHII+HLVRA+HK+V LH L +TVLECY CG RN+F+LGFIPAKA +VVVLL
Sbjct: 70 GKSGASHIISHLVRARHKQVALHSHSSLSDTVLECYNCGTRNVFLLGFIPAKAKTVVVLL 129
Query: 188 CRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEV 247
CR PCA + KDMNWD QW+P+I+DR FL WL+ P+E+EQ+ +TS Q+ +LEE+
Sbjct: 130 CRQPCARASIAKDMNWDLTQWQPIISDRQFLPWLITPPSEEEQKLAIPITSQQMVRLEEL 189
Query: 248 WKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 307
W+ + A +DL DK + E + +
Sbjct: 190 WRKDPNANLEDL------------------------------------DKPI-EDDSLPS 212
Query: 308 VTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 367
V +R+ D + YQ + PL++ EADYDKRLKESQTQ++V VRW
Sbjct: 213 VELRYK------------------DAHAYQAVLSPLIQAEADYDKRLKESQTQKDVVVRW 254
Query: 368 DVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVG 426
D +NK+ A+F L K + G++RL GDE+KL Y + WS G+VIKIP+N DEVG
Sbjct: 255 DQAINKRYTAWFLLPKLESGEIRLAIGDEMKLTYEGELRAPWSSTGYVIKIPNNVSDEVG 314
Query: 427 LELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 486
LELK S P E T FSVD++WKSTSFDRMQ ALR FA D +S+++YH+LLGH++
Sbjct: 315 LELKRSDKVPIECTHNFSVDYVWKSTSFDRMQTALRLFATDGSRLSSFLYHKLLGHDIPP 374
Query: 487 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV-- 544
+ LP S PNLP LN SQ AV+ + +PLSLIQGPPGTGKTVTSA++VY L
Sbjct: 375 SFLKPKLPSDLSVPNLPKLNASQSEAVRAVLSKPLSLIQGPPGTGKTVTSASVVYHLATM 434
Query: 545 ----KQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR 600
+++ SPVLVCAPSN+AVDQL EKIHRTGL+VVRV AKSRE I+S VSFL+LH QI+
Sbjct: 435 QSRKRKSHSPVLVCAPSNVAVDQLAEKIHRTGLRVVRVAAKSREDIESSVSFLSLHEQIK 494
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
N + N EL++LL+L+ E ELS DEK+ R+L AEK LL A VICCTCVGAGD R+
Sbjct: 495 NYKFNPELQRLLKLRSENNELSIQDEKKLRILVAAAEKELLRAAHVICCTCVGAGDRRIS 554
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
K KF S+LIDE+ QA+EPECM+P++LGAKQ++LVGDH QLGPVVM KK A A LSQSLFE
Sbjct: 555 KYKFRSVLIDEATQASEPECMIPLVLGAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFE 614
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
RL++LG PFRL VQYRMHP LS+FPSN FYEG+LQNGV ER +DFPW PD P+
Sbjct: 615 RLIILGNSPFRLVVQYRMHPCLSEFPSNTFYEGTLQNGVTTSERIARHVDFPWIQPDSPL 674
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
+FY GQEE++ SGTS++NRTEAS EKI T F+R + PEQIG++TPY+GQR+++VQ+
Sbjct: 675 MFYANFGQEELSASGTSFLNRTEASTCEKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQY 734
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
MQ GS+ +Y+ +EVASVDAFQGREKD II+SCVRS++HQGIGF+NDPRRLNVALTRA
Sbjct: 735 MQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRA 794
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK--QYFKKN 957
KYG+IV+GNPKVL+K LW + + KE+ LVEG LN+L++ + + P+ Q FK++
Sbjct: 795 KYGVIVLGNPKVLAKHALWYHFVLHCKEKGYLVEGTLNSLQKFSLTLTPPQKPQKFKRD 853
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 988 bits (2553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/892 (54%), Positives = 626/892 (70%), Gaps = 96/892 (10%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHT-SGSHIINHLVRAKHKEVTLHKDGPLGETV 159
AC YCGI DPA V C KWFCN R +T S ++ HLVR+++KEV LH+D PLGE +
Sbjct: 90 ACAYCGIQDPACVAKCVATGKWFCNSRHNTLPASCLVYHLVRSRNKEVCLHRDSPLGEMI 149
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQ-----------------NSLKDMN 202
LECY G RN+F LGF+P K + VVVLL R P +LKDMN
Sbjct: 150 LECYLTGQRNVFTLGFVPCKDEEVVVLLARDPAMNAPGVGGSGASGAGANAQLAALKDMN 209
Query: 203 WDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQI-------------AKLEEVWK 249
D QW+PLIAD++FL WLVK P+EQ+ R RQ+T++Q KLEE+WK
Sbjct: 210 LDLTQWQPLIADKTFLPWLVKTPSEQDALRARQLTASQARIPYTGSHTTASACKLEELWK 269
Query: 250 DNAEATFQDLEK-PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENV 308
+ +AT +D+ + PG D++ + V
Sbjct: 270 TSPDATLEDVMRGPGEDDE-------------------------------------AQPV 292
Query: 309 TVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWD 368
+R+ D YQYQN+FGPL+K+EADYDK+ KESQ+++ + VRWD
Sbjct: 293 ALRY------------------ADAYQYQNVFGPLLKMEADYDKQQKESQSKDGLVVRWD 334
Query: 369 VGLNKKSIAYFSLAKTDGDMRLMQGDELKLRY---SYDASKT-WSGLGHVIKIPDNFGDE 424
VGLNK+ +AYF+ + RLM GDEL+LR+ + D ++T W G+G V+K N +E
Sbjct: 335 VGLNKRRVAYFTFPSDEEVARLMVGDELQLRHVGTNADGTRTTWVGVGSVLKFTAN--EE 392
Query: 425 VGLELKSSAG-APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN 483
VGLEL+S G AP E +TGFSVDF+WKSTSFDRMQ A++ FA+D+ SVS YIYH LLGH+
Sbjct: 393 VGLELRSGGGKAPVEHSTGFSVDFLWKSTSFDRMQAAMKAFALDETSVSGYIYHLLLGHD 452
Query: 484 VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL 543
VD R LP+ SAPNLP+LN SQV AV ++RPLSLIQGPPGTGKTVTSATIVY L
Sbjct: 453 VDPQELRTTLPQRMSAPNLPELNHSQVNAVASVLRRPLSLIQGPPGTGKTVTSATIVYHL 512
Query: 544 VKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNME 603
+Q V+VCAPSN+AVDQL EKI +TGLKVVRV AKSREA+ SPV L LH Q+ +++
Sbjct: 513 AQQNQGQVIVCAPSNVAVDQLAEKIEQTGLKVVRVAAKSREAVLSPVEHLTLHYQVAHLD 572
Query: 604 M--NSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
++EL KL QLK+E GELSS DE++YR LK+ E+ +L +ADV+C T VGAGDPRL
Sbjct: 573 SPEHAELAKLQQLKDELGELSSNDERKYRALKRATEREILQSADVVCTTAVGAGDPRLAN 632
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
+F +L+DES QATEPEC++P+I+GAKQ+++VGDHCQLGPVV CKKAARAGL QSLFER
Sbjct: 633 FRFRQVLMDESTQATEPECLIPLIMGAKQVVMVGDHCQLGPVVACKKAARAGLGQSLFER 692
Query: 722 LVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
L++LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV A ER ++ ++FPWP P PM+
Sbjct: 693 LILLGVQPIRLQVQYRMHPCLSEFPSNTFYEGALQNGVAAAERLMTHVNFPWPKPSTPMM 752
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
F+ G EEI+ SGTSY+NRTEA +VEKI T F+R G+ PE +GV+TPYEGQRA++VQHM
Sbjct: 753 FWSMTGAEEISASGTSYLNRTEAVSVEKIVTHFLRAGVAPEALGVVTPYEGQRAYVVQHM 812
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
G L ++Y EI+VASVD+FQGREKD II+SCVRSN+ GIGFLNDPRRLNVA+TRA+
Sbjct: 813 TRAGVLRQQLYNEIQVASVDSFQGREKDFIILSCVRSNEKAGIGFLNDPRRLNVAMTRAR 872
Query: 902 YGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
G++++GNPKVLS+QPL+++LL +++ + LVEGPLN LKE + SKPK +
Sbjct: 873 SGLVILGNPKVLSRQPLFHDLLQHFRDCECLVEGPLNALKECAMTLSKPKSH 924
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/876 (55%), Positives = 612/876 (69%), Gaps = 87/876 (9%)
Query: 89 GNEFFNKELPP------HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRA 142
G E+ + PP HAC P V+ KWFCN RG+TS SHI++HLV+A
Sbjct: 62 GEEYDRDDEPPLGHGVEHACS------PQSVV------KWFCNSRGNTSASHIVSHLVKA 109
Query: 143 KHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMN 202
KHKEV LHKD PLG+T+LECY C +N+F+LGFI AK ++VVV+LCR PCA+ + +D+N
Sbjct: 110 KHKEVVLHKDSPLGDTILECYNCTNKNVFMLGFIAAKNEAVVVILCRHPCASTTTSRDIN 169
Query: 203 WDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP 262
WD +W +I DRSFLSWLVKVP+E EQ R RQ++ AQIAKLEE+W+DN A +D E
Sbjct: 170 WDPSEWSAIIHDRSFLSWLVKVPSEAEQLRARQISMAQIAKLEEMWRDNPNAKLEDAEA- 228
Query: 263 GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIA 322
+D YQYQNI GPLVK+EADYDKR+KESQ + +++VRWD+GLN+K A
Sbjct: 229 -------------QDAYQYQNILGPLVKIEADYDKRMKESQGESDISVRWDMGLNQKRTA 275
Query: 323 YFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 382
+F++ K + V+L + RLK VG + K A +
Sbjct: 276 WFTMPKLESGE----------VRLAVGDELRLKL------------VGASMKGWANMGNS 313
Query: 383 KTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG 442
D L W G+G VIK+PDN D + LE++ S PT+ G
Sbjct: 314 S----------DNL-----------WEGVGSVIKVPDNVDDWIVLEMRRSDNVPTDCREG 352
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
F+VDF+WK+TSFDRMQ A++ FA+D++SVS YI LLGH VD + R +PK F+AP L
Sbjct: 353 FAVDFVWKATSFDRMQQAMKTFAIDEKSVSGYI---LLGHEVDPQVLRTQMPKRFTAPGL 409
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
P+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+AVD
Sbjct: 410 PELNHSQMAAVKAVLQKPLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPSNVAVD 469
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS 622
L EKIH TGLKVVR+ AKSREA+DSPVS+L LH Q+ + EL+KL+QL+ E GELS
Sbjct: 470 HLAEKIHMTGLKVVRLTAKSREAVDSPVSYLTLHEQVAKNDTRRELQKLIQLRNELGELS 529
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
+DE++Y+ L + EK +L+ ADVIC TCVGAGDPRL K KF ++L+DE+ QA EPE M+
Sbjct: 530 QSDERKYKSLVRACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLVDEATQAAEPEAMI 589
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPEL 742
P+++G KQ +LVGDH QLGPV+M KKAARAGLSQSLFERLV+LG RP RL+VQYRMHP L
Sbjct: 590 PLVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNRPIRLQVQYRMHPCL 649
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRT 802
S+FPSN FYEG+LQNGV A ER +DFPWPV D PM+F+ G EEI+ SGTS+VNRT
Sbjct: 650 SEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQNTGTEEISSSGTSFVNRT 709
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+NVEK+ T+F + G+ P QIGVITPYEGQR+F+V +MQ G+L +Y+E+EVASVDA
Sbjct: 710 EAANVEKMVTKFFKSGVLPSQIGVITPYEGQRSFIVSYMQLHGALKKDLYKEVEVASVDA 769
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK ++
Sbjct: 770 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKP----SM 825
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
+ F K +K L+ ES F P + + N
Sbjct: 826 MQFSKPRKT-----LSRAMESFRRFEPPANDYAEKN 856
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/876 (54%), Positives = 607/876 (69%), Gaps = 100/876 (11%)
Query: 89 GNEFFNKELPP------HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRA 142
G E+ + PP HAC P V+ KWFCN RG+TS SHI++HLV+A
Sbjct: 62 GEEYDRDDEPPLGHGVEHACS------PQSVV------KWFCNSRGNTSASHIVSHLVKA 109
Query: 143 KHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMN 202
KHKEV LHKD PLG+T+LECY C +N+F+LGFI AK ++VVV+LCR PCA+ + +D+N
Sbjct: 110 KHKEVVLHKDSPLGDTILECYNCTNKNVFMLGFIAAKNEAVVVILCRHPCASTTTSRDIN 169
Query: 203 WDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP 262
WD +W +I DRSFLSWLVKVP+E EQ R RQ++ AQIAKLEE+W+DN A +D E
Sbjct: 170 WDPSEWSAIIHDRSFLSWLVKVPSEAEQLRARQISMAQIAKLEEMWRDNPNAKLEDAEA- 228
Query: 263 GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIA 322
+D YQYQNI GPLVK+EADYDKR+KESQ + +++VRWD+GLN+K A
Sbjct: 229 -------------QDAYQYQNILGPLVKIEADYDKRMKESQGESDISVRWDMGLNQKRTA 275
Query: 323 YFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 382
+F++ K + V+L + RLK VG + K A ++
Sbjct: 276 WFTMPKLESGE----------VRLAVGDELRLKL------------VGASMKGWA--NMG 311
Query: 383 KTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG 442
+ ++ W G+G VIK+PDN PT+ G
Sbjct: 312 NSSDNL-------------------WEGVGSVIKVPDN-------------NVPTDCREG 339
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
F+VDF+WK+TSFDRMQ A++ FA+D++SVS YI LLGH VD + R +PK F+AP L
Sbjct: 340 FAVDFVWKATSFDRMQQAMKTFAIDEKSVSGYI---LLGHEVDPQVLRTQMPKRFTAPGL 396
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
P+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+AVD
Sbjct: 397 PELNHSQMAAVKAVLQKPLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPSNVAVD 456
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS 622
L EKIH TGLKVVR+ AKSREA+DSPVS+L LH Q+ + EL+KL+QL+ E GELS
Sbjct: 457 HLAEKIHMTGLKVVRLTAKSREAVDSPVSYLTLHEQVAKNDTRRELQKLIQLRNELGELS 516
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
+DE++Y+ L + EK +L+ ADVIC TCVGAGDPRL K KF ++L+DE+ QA EPE M+
Sbjct: 517 QSDERKYKSLVRACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLVDEATQAAEPEAMI 576
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPEL 742
P+++G KQ +LVGDH QLGPV+M KKAARAGLSQSLFERLV+LG RP RL+VQYRMHP L
Sbjct: 577 PLVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNRPIRLQVQYRMHPCL 636
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRT 802
S+FPSN FYEG+LQNGV A ER +DFPWPV D PM+F+ G EEI+ SGTS+VNRT
Sbjct: 637 SEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVADTPMMFHQNTGTEEISSSGTSFVNRT 696
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+NVEK+ T+F + G+ P QIGVITPYEGQR+F+V +MQ G+L +Y+E+EVASVDA
Sbjct: 697 EAANVEKMVTKFFKSGVLPSQIGVITPYEGQRSFIVSYMQLHGALKKDLYKEVEVASVDA 756
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK ++
Sbjct: 757 FQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKP----SM 812
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
+ F K +K L+ ES F P + + N
Sbjct: 813 MQFSKPRKT-----LSRAMESFRRFEPPANDYAEKN 843
>gi|268569138|ref|XP_002640442.1| C. briggsae CBR-SMG-2 protein [Caenorhabditis briggsae]
Length = 1051
Score = 967 bits (2501), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/949 (50%), Positives = 634/949 (66%), Gaps = 72/949 (7%)
Query: 11 QTLTFLDTEETDLIGGDTQGSEFDFTD-FTLPSQSQTQASQLDSVNQIQVNGKQNLDNSN 69
+ LTF+DT++ + TQ S+FD + F++P+QS L + G +L
Sbjct: 14 EILTFVDTDDCAMSAA-TQDSQFDLDNQFSVPTQSSQTTDLLQGTD-----GTSDL---- 63
Query: 70 LNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGH 129
H+++ E + + +LP HAC+YCGI DP V C +C KWFCN
Sbjct: 64 ------PFHDVEDESDSEKSLTEDQAKLPEHACRYCGISDPLCVAKCTVCMKWFCNSNDG 117
Query: 130 TSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCR 189
T G HI++H+VR++HKE HKD P G+T LECY C +N+F LGFIP K D VVV++CR
Sbjct: 118 TPGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCASKNVFNLGFIPGKKDQVVVIICR 177
Query: 190 TPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWK 249
TPCA D NW E WK +IA++ LSW+V VP+E++ R R++T+ Q +LEE+W+
Sbjct: 178 TPCANLAFQNDDNWSPEDWKSVIAEKQLLSWIVNVPSEEQVARARKITAQQAIRLEELWR 237
Query: 250 DNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVT 309
++ EAT DL +PG+D +P V L+Y D +QY IF PLV +EA+YD+R+KES +Q T
Sbjct: 238 EHPEATLDDLNRPGLDREPDHVQLKYMDAHQYAKIFRPLVAIEAEYDRRMKESASQAVGT 297
Query: 310 VRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 369
VRW+ GL + +A+F L + DG ++KL + RLK +QT
Sbjct: 298 VRWEHGLRQSVLAFFHLPQF-ADG---------VMKLAKGDELRLKHNQT---------- 337
Query: 370 GLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLEL 429
+ G E WS +G V+KIPDN +EVG+E+
Sbjct: 338 ---------------------VDGSE------------WSRIGSVMKIPDNHSEEVGIEI 364
Query: 430 KSSAG-APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL 488
+ + E+ F+VD +W +T+F R AL D +SVS Y+YH+LLG DE++
Sbjct: 365 RGQVDRSVMESRIMFTVDVVWNATTFHRQYNALDALVNDQKSVSPYLYHKLLGKPFDEMM 424
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTG 548
+ LP+ SAP LPDLN SQ AVK + RPLSLIQGPPGTGKTV SATIVY LV++T
Sbjct: 425 LKFELPRRLSAPGLPDLNSSQSQAVKQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTE 484
Query: 549 SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSEL 608
VLVC+PSNIAVD L EKIH+TGLKVVR+CA+SRE ++ V L L +Q++ + EL
Sbjct: 485 GNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHSETTVPHLTLQHQLKVLG-GPEL 543
Query: 609 KKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
KKL+QLKEE GEL S D+ RYR LK+ E LL ADVICCTC A D RL KI+ ++L
Sbjct: 544 KKLIQLKEEIGELESKDDLRYRQLKRVKEHELLAAADVICCTCSSAADARLSKIRTRTVL 603
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR 728
IDES QATEPE +V ++ G +QL+LVGDHCQLGPVV+CKKAA AGLSQSLFERLV+LGIR
Sbjct: 604 IDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIR 663
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQ 788
PFRL+VQYRMHP LS+FPSN FY+GSLQNGV +ER++ ID+ WP P KP F+ G
Sbjct: 664 PFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTENERQMKGIDWSWPTPSKPAFFWHCSGA 723
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP 848
EE++ SGTS++NRTEA+NVEK+ ++ I+ G++P QIGVITPYEGQR+F+V +MQ QG+L
Sbjct: 724 EELSASGTSFLNRTEAANVEKLVSKLIKGGVEPRQIGVITPYEGQRSFIVNYMQTQGTLN 783
Query: 849 AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
+K+Y+ +E+ASVDAFQGREKD II++CVRSND GIGFL+DPRRLNVA+TRAKYGI+V+G
Sbjct: 784 SKLYEGVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGIVVVG 843
Query: 909 NPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
N KVLS+ LW L+N YK++ +L EGP++ LK + KP Q K N
Sbjct: 844 NAKVLSRHELWYELINHYKKKDMLYEGPISALKPFTMTLPKPIQKAKNN 892
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/576 (80%), Positives = 514/576 (89%), Gaps = 5/576 (0%)
Query: 388 MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDF 447
M+LM GDEL+LRY + W+ +GHVIK+PDNFGD++GLELKSS AP + ++ FSVDF
Sbjct: 1 MKLMHGDELRLRYVGEMYSPWNEIGHVIKVPDNFGDDIGLELKSSTNAPVKCSSNFSVDF 60
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV----DEVLFRCHLPKHFSAPNLP 503
IWK TSFDRM ALR FA+D QSVS +IY RLLGH D+VLFR PK FSAPNLP
Sbjct: 61 IWKCTSFDRMTRALRTFAMDRQSVSNFIYSRLLGHGRPDANDDVLFRGAQPKLFSAPNLP 120
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
DLNRSQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIVYQLVKQ G VLVCAPSN AVDQ
Sbjct: 121 DLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQ 180
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
LTEKIHRT LKVVRVCAKSREAIDSPVSFLALHNQIR+ME N+ELKKL QLK+ETGELSS
Sbjct: 181 LTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRSMETNTELKKLQQLKDETGELSS 240
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
ADEKRYR LK+ E LL+ ADVICCTCVGAGD RL +IKF SILIDESMQ+TEPECMVP
Sbjct: 241 ADEKRYRNLKRGTENQLLEAADVICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVP 300
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
V+LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS
Sbjct: 301 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 360
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
+FPSNFFYEGSLQNGVCA++R+L K+DFPWP P++PM F VTQGQEEIAGSGTS++NRTE
Sbjct: 361 QFPSNFFYEGSLQNGVCAEDRRL-KLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTE 419
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A+NVEKITTRF++ G+KPEQIG+ITPYEGQRA+LVQ+MQYQGSL +++YQEIE+ASVDAF
Sbjct: 420 AANVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAF 479
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD+IIMSCVRSN+ QGIGFLNDPRRLNVALTRAKYGII++GNPKVL+KQ LWN+LL
Sbjct: 480 QGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKYGIIIVGNPKVLAKQQLWNHLL 539
Query: 924 NFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
NFYK++KVLVEG LNNLKESLI F KPK+ NM
Sbjct: 540 NFYKDRKVLVEGSLNNLKESLIHFQKPKKLVNTMNM 575
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 966 bits (2497), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/880 (54%), Positives = 609/880 (69%), Gaps = 85/880 (9%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
+LP +AC YCGIHDPA ++ KWFCN R T GSHII HLVR +HKEV LH++ PL
Sbjct: 87 QLPRYACSYCGIHDPACMVKDVRDGKWFCNARLGTPGSHIIMHLVRTRHKEVCLHEENPL 146
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
GETVLECY CG RN+F+LGF+PA+ DSVVVLLCR PC + KD+ W+ EQW+PLI DR
Sbjct: 147 GETVLECYNCGTRNVFLLGFVPAQGDSVVVLLCREPCLHSLAKKDVGWELEQWQPLIEDR 206
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRY 275
FLSWLV++PTE+E R R +++ Q+ KLEE+WK N A+ +DLE+ + E+P
Sbjct: 207 QFLSWLVRIPTEKELNRARHISTEQVNKLEELWKTNPSASLEDLERGVIGEEP------- 259
Query: 276 EDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQ 335
+ V +R++ DG+
Sbjct: 260 ------------------------------QPVLLRYN------------------DGFH 271
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGD 394
YQ IF PLVKLEAD D ++K Q++ ++VRWDVGLNKK IA+F + + +GD++++ GD
Sbjct: 272 YQAIFSPLVKLEADNDMKIKAEQSRPGISVRWDVGLNKKLIAFFIMPQVAEGDLKILVGD 331
Query: 395 ELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKS---SAGAPTEATTGFSVDFIWKS 451
EL+L++ + W GHV N +E+ LEL+S S+ AP + FSV+ IWKS
Sbjct: 332 ELRLKH---PASNWECTGHVKGFTAN--EEIALELRSGKASSSAPRDCHKDFSVEVIWKS 386
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH---FSAPNLPDLNRS 508
T+FDRMQ AL+ FAVD+ SVS YIYHR+LGH V+ HL KH +AP LP+LN S
Sbjct: 387 TTFDRMQKALQAFAVDETSVSGYIYHRILGHEVNRQTI--HLFKHPNNLNAPGLPELNPS 444
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL------------VKQTGSPVLVCAP 556
Q AVK A++ PLSL+QGPPGTGKTVTSATIVY L ++ +LVCAP
Sbjct: 445 QKAAVKAALESPLSLVQGPPGTGKTVTSATIVYHLANNVKNITQRQKTRKCSRQILVCAP 504
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN----SELKKLL 612
SNIAVDQL EKI TGL VVR+CAKSREA+ S V L LH ++RN N +EL KL+
Sbjct: 505 SNIAVDQLAEKISCTGLNVVRLCAKSREAVSSSVDHLTLHQKLRNRSSNNPNATELVKLI 564
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
QL EE GEL+ D+KR R LK+N E+ +L++ DVICCTC AGD R+ +F ++LIDE+
Sbjct: 565 QLHEELGELNERDDKRLRTLKRNFEREILESMDVICCTCTTAGDRRIAHFRFRAVLIDEA 624
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QATEPE ++P+I G KQ++ VGDHCQLGPVV K AA+AG QSLFERLV LGIRP RL
Sbjct: 625 TQATEPESLLPLIHGCKQVVFVGDHCQLGPVVTSKTAAKAGFGQSLFERLVALGIRPLRL 684
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+QYRMHP L++FPSN FYEGSLQNG+ A ERK S + FPWPV KP FYV G EE++
Sbjct: 685 TIQYRMHPSLTEFPSNMFYEGSLQNGITAAERKPSSVSFPWPVAAKPFFFYVQTGPEEVS 744
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTS++NR EA VEKI + F++ G+ P++IGVITPYEGQRAF+VQH G++ ++Y
Sbjct: 745 ASGTSFLNRVEADAVEKIVSHFLKNGVDPQRIGVITPYEGQRAFIVQHFLRSGTMRLELY 804
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
+EIEVASVDAFQGREKD II+SCVRSN+HQGIGFL+DPRRLNVALTRA++G+I++GNPKV
Sbjct: 805 KEIEVASVDAFQGREKDFIILSCVRSNEHQGIGFLSDPRRLNVALTRARFGLIILGNPKV 864
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
L+K+ LW LL KE VLVEG L+ LK SL+ F +P++
Sbjct: 865 LAKKWLWACLLQHCKENDVLVEGSLSRLKTSLVQFPRPRK 904
>gi|196001321|ref|XP_002110528.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
gi|190586479|gb|EDV26532.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
Length = 1070
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/1009 (51%), Positives = 656/1009 (65%), Gaps = 160/1009 (15%)
Query: 2 SVDAYGPSS-QTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQ------LDSV 54
+ DAYGPS+ TLTF D E +D GGDTQ S++DF DFT+PSQ+Q+Q+ LD
Sbjct: 5 NADAYGPSTANTLTFYDPESSDF-GGDTQASDYDFKDFTIPSQTQSQSQSDPVVPYLDGN 63
Query: 55 NQIQVN---GKQNL------DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYC 105
N+ N G +N+ ++ L V+ K+ +L FE++ED+ + F+ KE HAC YC
Sbjct: 64 NKSFTNSTIGNRNIHSAVAASDNLLTNVTDKMVDLNFEDDEDEEDGFYKKERLLHACSYC 123
Query: 106 GIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTC 165
GIHDPA V+MCN CK+WFCNGRG TSGSHIINHLVRAKH+EVTLHKDGPLGETVLECY C
Sbjct: 124 GIHDPAAVVMCNTCKRWFCNGRGTTSGSHIINHLVRAKHREVTLHKDGPLGETVLECYNC 183
Query: 166 GVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVP 225
RNIFVLG+IPAK+DSVVVLLCR PCA KD +WDQ QW+ LI ++ F WLVKVP
Sbjct: 184 ACRNIFVLGYIPAKSDSVVVLLCRHPCATLTKSKDDDWDQSQWQSLIDEKCFRKWLVKVP 243
Query: 226 TEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIF 285
++QEQ R +Q+T+ QI +LE++W+++ EAT +DL+KP + E+ H
Sbjct: 244 SDQEQMRAKQITAQQINRLEDLWREHPEATLEDLDKPELTEEVHP--------------- 288
Query: 286 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVK 345
V +R++ D Y Y++IF PL+
Sbjct: 289 ----------------------VLLRYE------------------DAYIYKSIFEPLII 308
Query: 346 LEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDAS 405
+E+DYDK+LK++ Q+NV VRWD LNKK +AYFSL D
Sbjct: 309 MESDYDKQLKQNLAQKNVKVRWDQRLNKKRLAYFSLPDLQDD------------------ 350
Query: 406 KTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFA 465
DEVGLELKS+ P F V+F+WK+TSFDRM+ A+ KFA
Sbjct: 351 ----------------NDEVGLELKSNFDVPESCKEPFEVEFVWKATSFDRMRAAVHKFA 394
Query: 466 VDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQ 525
+D S++ Y+YHRLLGH V+E C LPK + LP+LN SQ A+K+ +Q+PLSLIQ
Sbjct: 395 IDKTSMNGYLYHRLLGHLVEERPISCKLPKRIAVSGLPELNDSQRTAIKNVLQKPLSLIQ 454
Query: 526 GPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI-----AVDQL-----TEKIHRTGLKV 575
GPPGTGKTVTSA +VY LV NI + D+L E IH L+V
Sbjct: 455 GPPGTGKTVTSAALVYHLV-------------NINRWYESYDRLYPNIKPELIH---LRV 498
Query: 576 VRVCAKSREAIDSPVSFLALHNQIRNMEM--NSELKKLLQLKEETGELSSADEKRYRMLK 633
+R+CA+SRE +DS VS L+LHNQI ME +L+KL QL+EE GELSS+D+ YR L+
Sbjct: 499 IRLCARSRETLDSSVSMLSLHNQILRMETPEGMKLRKLQQLREEQGELSSSDDALYRQLR 558
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
EK LL +ADVICCTCVGAGD RL F ILIDE+ QATEPECM+P++ GAKQ IL
Sbjct: 559 NTCEKELLQHADVICCTCVGAGDRRLTGFTFRVILIDEATQATEPECMIPIVRGAKQCIL 618
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQLGPVVMCKKAA AGL+QSLF RLV LG+RP RL VQYRMHP+LS+FPS FYEG
Sbjct: 619 VGDHCQLGPVVMCKKAAGAGLAQSLFARLVALGVRPIRLTVQYRMHPDLSEFPSFHFYEG 678
Query: 754 SLQNGVCADERKLSKI-----------------------DFPWPV---PDKPMLFYVTQG 787
+LQNGV D + L I P + ++PM F+ TQG
Sbjct: 679 ALQNGVAIDRKGLPTITASGNNSKEVQQDQANVTLSDSESSPESLIVDRNRPMFFWNTQG 738
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
EE +G+SY+NR+EA +VEKI T F+R G+KPEQIGVITPYE QRA++V M+ +GS+
Sbjct: 739 TEEPGATGSSYLNRSEAESVEKIITCFLRTGIKPEQIGVITPYESQRAYVVTLMKTRGSM 798
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
+YQ++EVASVDAFQGREKD II+SCVRSN++QGIGFLNDPRRLNV++TRAK G+I+I
Sbjct: 799 QDDLYQKVEVASVDAFQGREKDYIILSCVRSNEYQGIGFLNDPRRLNVSITRAKNGLIII 858
Query: 908 GNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
GN +VL+K PLW NL+++ K++ +EG LNNL+E + P++ K
Sbjct: 859 GNARVLAKHPLWYNLIDYMKDKHCFMEGSLNNLRECNMRLPVPRKKASK 907
>gi|307188109|gb|EFN72941.1| Putative regulator of nonsense transcripts 1 [Camponotus
floridanus]
Length = 840
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/652 (72%), Positives = 530/652 (81%), Gaps = 64/652 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLD-----SVN 55
MSVDAYGPSSQTLTFLDTEETDLIG DTQGSEFDFTDFTLPSQSQTQASQ D S
Sbjct: 1 MSVDAYGPSSQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSQSQTQASQHDATQTQSSQ 60
Query: 56 QIQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
+QVNG + +L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V
Sbjct: 61 PVQVNGTNGSSSLDLKISGAAQSLAELQFEEEEEEA--YYNRDLPEHACKYCGIHEASCV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY+C RN+FVL
Sbjct: 119 VMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYSCATRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPA+ADSVVVLLCR PCAAQ+SLKDMNWDQEQWKPLI DRSFLSWLVK+P+EQEQ R
Sbjct: 179 GFIPARADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLIEDRSFLSWLVKIPSEQEQLRA 238
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P QVLLRYEDGYQYQNIFGPLVKLEA
Sbjct: 239 RQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEA 298
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
DYDKRLKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGD +KL + R
Sbjct: 299 DYDKRLKESQTQENIEVRWDVGLNKKTIAYFVLAKTDGD-----------MKLMHGDELR 347
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
L+ Y + K WSG+GH
Sbjct: 348 LR--------------------------------------------YLGELHKPWSGIGH 363
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN+G++VG+ELK+++GAPTE T F VDFIWKSTSFDRMQ ALRKFAVDD SVSA
Sbjct: 364 VIKIPDNYGEDVGIELKNNSGAPTECVTNFVVDFIWKSTSFDRMQSALRKFAVDDTSVSA 423
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT
Sbjct: 424 YIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 483
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFL
Sbjct: 484 VTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFL 543
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNAD 645
ALHNQI+N+E N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ AD
Sbjct: 544 ALHNQIKNLETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAAD 595
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%)
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
L K+ LL EQKVLVEGPLNNLKES+I F+KPK+ N
Sbjct: 581 LLKKAAEKELLEAADEQKVLVEGPLNNLKESMIQFAKPKKLVNAAN 626
>gi|341881801|gb|EGT37736.1| hypothetical protein CAEBREN_04117 [Caenorhabditis brenneri]
Length = 1054
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/956 (50%), Positives = 635/956 (66%), Gaps = 72/956 (7%)
Query: 4 DAYGPSS-QTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGK 62
D Y S +TLTF+DT+E + TQ S+F F++P+QS L V+
Sbjct: 6 DHYSKSGGETLTFVDTDECGMSAA-TQDSQFYDNQFSVPTQSSQVTDFLPGVDA------ 58
Query: 63 QNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKW 122
S L H+++ E E++ ++LP HACKYCGI DP V C +C KW
Sbjct: 59 ----TSELTF-----HDVEDESEDEKSLTDDQQKLPEHACKYCGISDPLCVAKCTVCNKW 109
Query: 123 FCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADS 182
FCN T G HI++H+VR++HKE HKD P G+T LECY CG +N+F LGFIP K D
Sbjct: 110 FCNSNDGTPGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCGSKNVFNLGFIPGKKDQ 169
Query: 183 VVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIA 242
VVV++CRTPCA D NW E WK +IA++ LSW+V P+E++ R R++T+AQ
Sbjct: 170 VVVIICRTPCANLAFQNDDNWSPEDWKSVIAEKQLLSWIVNTPSEEQVARARKITAAQAV 229
Query: 243 KLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES 302
+LEE+W+++ +AT DL KPG+D +P V L+Y D + Y IF PLV +EA+YD+R+KE
Sbjct: 230 RLEELWREHPDATLDDLNKPGLDREPDHVQLKYTDAHHYSKIFRPLVAIEAEYDRRMKEQ 289
Query: 303 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 362
+Q TVRW+ GL A+F L + DG ++KL + RLK +QT
Sbjct: 290 ASQAVGTVRWEQGLRGSVCAFFHLPQF-ADG---------VMKLAKGDELRLKHNQT--- 336
Query: 363 VTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFG 422
+ G E W+ +G+V KIPDN
Sbjct: 337 ----------------------------VDGSE------------WAKVGNVFKIPDNHS 356
Query: 423 DEVGLELKSSAG-APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
+E+G+E++ + E+ F+VD +W +T+FDR AL+ D+QSVS Y+Y +LLG
Sbjct: 357 EEIGIEIRGQVDRSVQESRIMFTVDVVWNATTFDRQYRALQALQTDNQSVSPYLYAKLLG 416
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVY 541
VDE++ + LP+ SAP LPDLN SQ+ AVK + RPLSLIQGPPGTGKTV SATIVY
Sbjct: 417 KPVDELMLKFELPRRLSAPGLPDLNSSQMQAVKQVLTRPLSLIQGPPGTGKTVVSATIVY 476
Query: 542 QLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN 601
LVK+T VLVC+PSNIAVD L EKIH+TGLKVVR+ AKSRE D+ + +L L +Q++
Sbjct: 477 HLVKKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLTAKSREHTDTTIPYLTLQHQLKV 536
Query: 602 MEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
M EL+KL+QLKEE GEL + D+ RY LK+ E LL ADVICCTC A D RL K
Sbjct: 537 M-AGPELRKLIQLKEEIGELEAKDDIRYSQLKRVKEHDLLAAADVICCTCSSAADARLTK 595
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
I+ ++LIDES QATEPE +V ++ G +QL+LVGDHCQLGPVV+CKKAA AGLSQSLFER
Sbjct: 596 IRTRTVLIDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKKAAMAGLSQSLFER 655
Query: 722 LVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
LV+LGIRPFRL+VQYRMHP LS+FPSN FY+GSLQNGV ++R + +D+ WP +KP
Sbjct: 656 LVLLGIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTENDRYMKGVDWHWPTHNKPAF 715
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
F+ G EE++ SGTS++NRTEA+NVEK+ ++ I+ G++P QIGVITPYEGQR+F+V +M
Sbjct: 716 FWHCSGAEELSASGTSFLNRTEAANVEKLVSKLIKGGVQPLQIGVITPYEGQRSFIVNYM 775
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
QG+L +K+Y+ +E+ASVDAFQGREKD II++CVRSND GIGFL+DPRRLNVA+TRAK
Sbjct: 776 HTQGTLNSKLYESVEIASVDAFQGREKDYIIVTCVRSNDALGIGFLSDPRRLNVAITRAK 835
Query: 902 YGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
YG++V+GN KVLS+ LW L+N +K++ +L EGP++ LK + KP K N
Sbjct: 836 YGMVVVGNAKVLSRHELWYELINHFKKKDMLYEGPISALKPLNMTIPKPVLKAKNN 891
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/871 (54%), Positives = 620/871 (71%), Gaps = 45/871 (5%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
+ LP HACKYCGIHDP V+ C KWFCNGRG+TSGSHIINHLVR+K+ V LHKD
Sbjct: 206 ENLPEHACKYCGIHDPKCVVKCISTGKWFCNGRGNTSGSHIINHLVRSKNNAVMLHKDSA 265
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG++VLECYTCG RN+F LGFIPA+ADS V+LLCR PCA+ K+ +WD QW+P++ +
Sbjct: 266 LGDSVLECYTCGSRNVFNLGFIPARADSFVILLCRHPCASPQVAKNDDWDTTQWQPIVQE 325
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV-------DED 267
RS L W+VKVP+ +EQ R RQ+T AQI KLE++W+DN +AT D++KP V +E+
Sbjct: 326 RSLLKWIVKVPSHKEQMRARQITPAQIDKLEDLWRDNPDATLLDVKKPRVETAAEAQEEE 385
Query: 268 PHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 327
+ L Y+D Y+YQNI GPLV++EA++ +R+KE Q +++TV WD + ++ +A F L
Sbjct: 386 LARTKLIYDDVYEYQNILGPLVEIEAEHVRRIKEEQRCDDITVHWDTNIKRQYVASFELP 445
Query: 328 KTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 387
+ D +KL + RL ++ V W K + D
Sbjct: 446 RQD-------------IKLLVGDELRLCYPFSKNEV---WQATGTVKKVP---------D 480
Query: 388 MRLMQGD-ELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVD 446
R + + +L LR + ++ + P N GDE + + TG+ ++
Sbjct: 481 TRSEEVELQLDLRRPSPSERS-----RLRSRPRN-GDETAAAMLTL----ETVNTGYYLE 530
Query: 447 FIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLN 506
F+W ST FDRMQ A+R+FAV++ ++S Y++HR LGH ++ + +PK SAP LP+LN
Sbjct: 531 FVWNSTVFDRMQSAMRRFAVNEAAMSDYLFHRFLGHQLNLPQLKFDMPKRLSAPGLPELN 590
Query: 507 RSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTE 566
SQ+ A++ +Q+PLSLIQGPPGTGKTVTSAT+VY LV+Q G VLVCAPSNIAV+ L +
Sbjct: 591 HSQLNAIRTVLQQPLSLIQGPPGTGKTVTSATLVYHLVQQRGQ-VLVCAPSNIAVEHLAQ 649
Query: 567 KIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADE 626
+IH TG+KVVRV AK+RE ++ SFL+LHNQ+ N +S+ KL +LK+E GELS ADE
Sbjct: 650 RIHLTGVKVVRVAAKTREQLEGDASFLSLHNQVENYTGSSKFTKLTKLKKELGELSEADE 709
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVI 685
+ YR L K E L ADVICCTC G GD R++ K + ++L+DE+ QATEPE ++P++
Sbjct: 710 RMYRRLYKKIEDIFLRKADVICCTCAGGGDRRIVAGKPYRTVLVDEATQATEPEILIPLV 769
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKF 745
LGA Q+ILVGDHCQLGPVVMCKKAA AGL+ SLFERLVV G+RP RL+VQYRMHP LS+F
Sbjct: 770 LGANQVILVGDHCQLGPVVMCKKAANAGLAHSLFERLVVHGVRPVRLQVQYRMHPALSEF 829
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS 805
PSN FYEGSLQNGV A ER+ +DFPWP P+ PMLFY + G+EE+A SG+SY+NRTEA+
Sbjct: 830 PSNTFYEGSLQNGVTAAEREQPAVDFPWPNPEVPMLFYASMGREEMAASGSSYLNRTEAA 889
Query: 806 NVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
NVEKI TRF+R G+ P+QIG+ITPYEGQRA +VQ+M + G+ Y+ +EVASVD+FQG
Sbjct: 890 NVEKIVTRFMRAGITPDQIGIITPYEGQRAHIVQYMNFHGAARRSFYEALEVASVDSFQG 949
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
REKD II+SC RSNDHQGIGFLNDPRRLNVALTRAKYG+I++GNP+ LSKQ LW+NLL
Sbjct: 950 REKDYIILSCTRSNDHQGIGFLNDPRRLNVALTRAKYGLILVGNPRALSKQALWHNLLLH 1009
Query: 926 YKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
+KEQ VLVEGPL+ L ++ SKP+ K
Sbjct: 1010 FKEQGVLVEGPLDQLSPYMMHLSKPRPLANK 1040
>gi|332029845|gb|EGI69714.1| Putative regulator of nonsense transcripts 1 [Acromyrmex
echinatior]
Length = 838
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/652 (73%), Positives = 527/652 (80%), Gaps = 64/652 (9%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLD-----SVN 55
MSVDAYGPSSQTLTFLDTEETDLIG DTQGSEFDFTDFTLPS SQTQASQ D S
Sbjct: 1 MSVDAYGPSSQTLTFLDTEETDLIGADTQGSEFDFTDFTLPSPSQTQASQHDVTQTQSSQ 60
Query: 56 QIQVNGKQNLDNSNLNL--VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
IQVNG + +L + +Q L ELQFEEEE++ ++N++LP HACKYCGIH+ + V
Sbjct: 61 SIQVNGTNGSSSLDLKISGAAQSLAELQFEEEEEEA--YYNRDLPDHACKYCGIHEASCV 118
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+MCN+C+KWFCNGRG+TSGSHIINHLVRAKHKEVTLH+DGPLGETVLECY+C RN+FVL
Sbjct: 119 VMCNVCRKWFCNGRGNTSGSHIINHLVRAKHKEVTLHRDGPLGETVLECYSCATRNVFVL 178
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRG 233
GFIPAKADSVVVLLCR PCAAQ SLKDMNWDQEQWKPLI DRSFLSWLVK P+EQEQ R
Sbjct: 179 GFIPAKADSVVVLLCRQPCAAQTSLKDMNWDQEQWKPLIEDRSFLSWLVKFPSEQEQLRA 238
Query: 234 RQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEA 293
RQ+++ QI KLEE+W+DN +ATFQDLEKPGVDE+P QVLLRYEDGYQYQNIFGPLVKLEA
Sbjct: 239 RQISAQQINKLEELWRDNVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEA 298
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
DYDKRLKESQTQEN+ VRWDVGLNKK+IAYF LAKTDGD +KL + R
Sbjct: 299 DYDKRLKESQTQENIEVRWDVGLNKKTIAYFMLAKTDGD-----------MKLMHGDELR 347
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
L+ Y + K WSG+GH
Sbjct: 348 LR--------------------------------------------YLGELHKPWSGIGH 363
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
VIKIPDN+G+EVG+ELK+++GAPTE + F VDFIWKSTSFDRMQ ALRKFAVDD SVSA
Sbjct: 364 VIKIPDNYGEEVGIELKNNSGAPTECISNFVVDFIWKSTSFDRMQSALRKFAVDDTSVSA 423
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
YIYHRLLGH V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT
Sbjct: 424 YIYHRLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 483
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
VTSATIVYQLVKQ G PVLVCAPSN AVDQLTEKIH++ LKVVR+CAKSREAIDSPVSFL
Sbjct: 484 VTSATIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFL 543
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNAD 645
ALHNQI+NME N+EL+KL QLK+ETGELSS DEKRYR+LKK AEK LL+ AD
Sbjct: 544 ALHNQIKNMETNTELQKLQQLKDETGELSSVDEKRYRLLKKAAEKELLEAAD 595
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%)
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
L K+ LL EQKVLVEGPLNNLKES+I F+KPK+ N
Sbjct: 581 LLKKAAEKELLEAADEQKVLVEGPLNNLKESMIQFAKPKKLVNAAN 626
>gi|17510163|ref|NP_490829.1| Protein SMG-2 [Caenorhabditis elegans]
gi|351051256|emb|CCD73461.1| Protein SMG-2 [Caenorhabditis elegans]
Length = 1069
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/969 (49%), Positives = 656/969 (67%), Gaps = 85/969 (8%)
Query: 2 SVDAYGPS-SQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
S D Y S +TLTF+D E+ + G+TQ S+F + F++P+QS +QA+ L +
Sbjct: 4 SDDEYSRSHGETLTFVDPEDDGVSIGNTQDSQFAYEQFSVPTQS-SQATDL-------LP 55
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKE-----LPPHACKYCGIHDPAYVIM 115
G + ++L H++ E++E D + +E LP HAC+YCGI DP V
Sbjct: 56 GGTDGTTNDL-----PFHDV--EDDESDSEKSLTEEQQQQKLPEHACRYCGISDPLCVAK 108
Query: 116 CNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGF 175
C +C+KWFCN TSG HI++H+VR++HKE HKD P G+T LECY CG +N+F LGF
Sbjct: 109 CTVCRKWFCNSNDGTSGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCGSKNVFNLGF 168
Query: 176 IPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQ 235
IP K D VVV++CRTPCA+ D NW E WK +IA++ LSW+V VP+E++ R R+
Sbjct: 169 IPGKKDQVVVIICRTPCASIAFQNDDNWSPEDWKSVIAEKQLLSWIVNVPSEEQVARARK 228
Query: 236 VTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADY 295
+T+ Q ++EE+W+D+ EAT DL K P + E D+
Sbjct: 229 ITATQAVRMEELWRDHPEATVDDLNK-------------------------PGLDREPDH 263
Query: 296 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLK 355
V +R+ D + Y +F PLV +EA+YD+R+K
Sbjct: 264 ------------VQLRY------------------VDAHHYSKVFRPLVAIEAEYDRRVK 293
Query: 356 ESQTQENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDELKLRYS--YDASKTWSGLG 412
ES +Q TVRW+ GL + +A+F L + DG M+L +GDEL+L++S D S+ W+ +G
Sbjct: 294 ESASQAVGTVRWEQGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSE-WTKIG 352
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPT-EATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSV 471
V KIPDN GDEVG+E++ + E+ F+VD +W +T+F+R AL D +++
Sbjct: 353 SVFKIPDNHGDEVGIEIRGAVDKSVMESRIMFTVDVVWNATTFERQYKALAALLNDSKAI 412
Query: 472 SAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTG 531
S Y+Y +LLGH +E++ + LP+ S LP+LN SQ+ AVK + RPLSLIQGPPGTG
Sbjct: 413 SPYLYQKLLGHPAEEMMLKFDLPRRLSVAGLPELNSSQMQAVKQVLTRPLSLIQGPPGTG 472
Query: 532 KTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
KTV SATIVY LV++T VLVC+PSNIAVD L EKIH+TGLKVVR+CA+SRE ++ V
Sbjct: 473 KTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHSETTVP 532
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
+L L +Q++ M +EL+KL+QLK+E GEL D+ RY LK+ E LL ADVICCTC
Sbjct: 533 YLTLQHQLKVMG-GAELQKLIQLKDEAGELEFKDDLRYMQLKRVKEHELLAAADVICCTC 591
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
A D RL KI+ ++LIDES QATEPE +V ++ G +QL+LVGDHCQLGPVV+CKKAA
Sbjct: 592 SSAADARLSKIRTRTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAI 651
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
AGLSQSLFERLV+LGIRPFRL+VQYRMHP LS+FPSN FY+GSLQNGV ++R ++ +D+
Sbjct: 652 AGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDW 711
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
WP P+KP F+ G EE++ SGTS++NRTEA+NVEK+ ++ I+ G++P QIGVITPYE
Sbjct: 712 HWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQIGVITPYE 771
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
GQR+F+V +M QG+L +K+Y+ +E+ASVDAFQGREKD II++CVRSND GIGFL+DPR
Sbjct: 772 GQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPR 831
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RLNVA+TRAKYG++++GN KVL++ LW+ L+N YK +++L EGP+N LK + + PK
Sbjct: 832 RLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEMLYEGPINALKP--LNLALPK 889
Query: 952 QYFK-KNNM 959
+ KNN+
Sbjct: 890 ATIRTKNNI 898
>gi|156065921|ref|XP_001598882.1| hypothetical protein SS1G_00971 [Sclerotinia sclerotiorum 1980]
gi|154691830|gb|EDN91568.1| hypothetical protein SS1G_00971 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 972
Score = 954 bits (2467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/820 (56%), Positives = 573/820 (69%), Gaps = 99/820 (12%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
KELP HAC YCGIH P+ V+ C C KWFC+ RG + SHI+NHLVRA+HKEV LH
Sbjct: 92 KELPAHACAYCGIHSPSCVVKCLGCNKWFCSARGTATSSHIVNHLVRARHKEVQLHPMST 151
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG+TVLECY CG++N+F+LGFIPAK+D+VVVLLCR PCA+ S KDM+WD +W+PLI D
Sbjct: 152 LGDTVLECYNCGIKNVFLLGFIPAKSDTVVVLLCRQPCASAPSSKDMSWDVSKWQPLIED 211
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLL 273
RSFL+WLV +PT+ EQ R R +T IAKLEE+WKDN AT QDLEK G+D+DP VLL
Sbjct: 212 RSFLTWLVSLPTDAEQLRARHLTPPMIAKLEEMWKDNVNATLQDLEKAAGIDDDPAPVLL 271
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
+ YD D
Sbjct: 272 K--------------------YD-----------------------------------DA 276
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQ 392
YQYQNIFGPLVK+EADYD++LKE+Q+++ + +RWD GLN K +A F L K + GD++L
Sbjct: 277 YQYQNIFGPLVKIEADYDRKLKEAQSEDGLIIRWDYGLNNKHLASFILPKIELGDVKLAV 336
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK---SSAGAPTEATTGFSVDFIW 449
GDE++L+Y + W G+G+V+KIP+N DEV +EL+ + PTE T FS D++W
Sbjct: 337 GDEMRLKYKGELRPVWEGVGYVVKIPNNQSDEVTIELRKVGNDKSVPTECTHNFSADYVW 396
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K+TS+DRMQ A++ FAVD+ SVS YI+H+LLGH V + +PK FS P LP+LN SQ
Sbjct: 397 KATSYDRMQFAMKTFAVDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFSVPGLPELNSSQ 456
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+ AVK +Q+PLSLIQGPPGTGKTVTSAT++Y L K G VLVCAPSN+AVDQL E+IH
Sbjct: 457 INAVKSVLQKPLSLIQGPPGTGKTVTSATVIYHLAKVNGGQVLVCAPSNVAVDQLCERIH 516
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
RT LKVVR+ AKSRE ++S V FL+LH Q+R + N EL KL QLK E GELSS DEK++
Sbjct: 517 RTQLKVVRLTAKSREDVESSVGFLSLHEQVRMNDSNHELAKLTQLKSELGELSSQDEKKF 576
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ L + AE+ +L NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG K
Sbjct: 577 KALTRAAEREILSNADVICCTCVGAGDPRLAKMKFRTVLIDESTQSAEPECMIPLVLGCK 636
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q++L+GDH QLGPV+M KKAA+AGL QSLFERLV LG++P L VQY
Sbjct: 637 QVVLIGDHKQLGPVIMNKKAAKAGLDQSLFERLVKLGLKPILLNVQY------------- 683
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
PD PM+F+ G EEI+ SGTSY+NRTEASNVEK
Sbjct: 684 --------------------------PDTPMMFWSNLGNEEISASGTSYLNRTEASNVEK 717
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF + G++P IGVITPYEGQR+++V MQ GS + Y+E+EVASVDAFQGREKD
Sbjct: 718 IVTRFFKAGVQPGDIGVITPYEGQRSYVVTSMQNAGSFKKEHYKEVEVASVDAFQGREKD 777
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG+++ G+
Sbjct: 778 FIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVIAGS 817
>gi|17380277|sp|O76512.1|RENT1_CAEEL RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase smg-2; AltName:
Full=Nonsense mRNA reducing factor 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|3328177|gb|AAC26789.1| nonsense-mediated mRNA decay trans-acting factor [Caenorhabditis
elegans]
Length = 1069
Score = 953 bits (2464), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/964 (49%), Positives = 653/964 (67%), Gaps = 75/964 (7%)
Query: 2 SVDAYGPS-SQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
S D Y S +TLTF+D E+ + G+TQ S+F + F++P+QS +QA+ L +
Sbjct: 4 SDDEYSRSHGETLTFVDPEDDGVSIGNTQDSQFAYEQFSVPTQS-SQATDL-------LP 55
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICK 120
G D + +L + + + + E+ E ++LP HAC+YCGI DP V C +C+
Sbjct: 56 G--GTDGTTNDLPFHDVEDDESDSEKSLTEEQHEQKLPEHACRYCGISDPLCVAKCTVCR 113
Query: 121 KWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKA 180
KWFCN TSG HI++H+VR++HKE HKD P G+T LECY CG +N+F LGFIP K
Sbjct: 114 KWFCNSNDGTSGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCGSKNVFNLGFIPGKK 173
Query: 181 DSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQ 240
D VVV++CRTPCA+ D NW E WK +IA++ LSW+V VP+E++ R R++T+ Q
Sbjct: 174 DQVVVIICRTPCASIAFQNDDNWSPEDWKSVIAEKQLLSWIVNVPSEEQVARARKITATQ 233
Query: 241 IAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLK 300
++EE+W+D+ EAT DL K P + E D+
Sbjct: 234 AVRMEELWRDHPEATVDDLNK-------------------------PGLDREPDH----- 263
Query: 301 ESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQ 360
V +R+ D + Y +F PLV +EA+YD+R+KES +Q
Sbjct: 264 -------VQLRY------------------VDAHHYSKVFRPLVAIEAEYDRRVKESASQ 298
Query: 361 ENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDELKLRYS--YDASKTWSGLGHVIKI 417
TVRW+ GL + +A+F L + DG M+L +GDEL+L++S D S+ W+ +G V KI
Sbjct: 299 AVGTVRWEQGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSE-WTKIGSVFKI 357
Query: 418 PDNFGDEVGLELKSSAGAPT-EATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIY 476
PDN GDEVG+E++ + E+ F+VD +W +T+F+R AL D +++S Y+Y
Sbjct: 358 PDNHGDEVGIEIRGAVDKSVMESRIMFTVDVVWNATTFERQYKALAALLNDSKAISPYLY 417
Query: 477 HRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTS 536
+LLGH +E++ + LP+ S LP+LN SQ+ AVK + RPLSLIQGPPGTGKTV S
Sbjct: 418 QKLLGHPAEEMMLKFDLPRRLSVAGLPELNSSQMQAVKQVLTRPLSLIQGPPGTGKTVVS 477
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 596
ATIVY LV++T VLVC+PSNIAVD L EKIH+TGLKVVR+CA+SRE ++ V +L L
Sbjct: 478 ATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHSETTVPYLTLQ 537
Query: 597 NQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
+Q++ M +EL+KL+QLK+E GEL D+ RY LK+ E LL ADVICCTC A D
Sbjct: 538 HQLKVMG-GAELQKLIQLKDEAGELEFKDDLRYMQLKRVKEHELLAAADVICCTCSSAAD 596
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
RL KI+ ++LIDES QATEPE +V ++ G +QL+LVGDHCQLGPVV+CKKAA AGLSQ
Sbjct: 597 ARLSKIRTRTVLIDESTQATEPEILVSIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQ 656
Query: 717 SLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
SLFERLV+LGIRPFRL+VQYRMHP LS+FPSN FY+GSLQNGV ++R ++ +D+ WP P
Sbjct: 657 SLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNVFYDGSLQNGVTENDRHMTGVDWHWPKP 716
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+KP F+ G EE++ SGTS++NRTEA+NVEK+ ++ I+ G++P QIGVIT YEGQR+F
Sbjct: 717 NKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSKLIKAGVQPHQIGVITSYEGQRSF 776
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
+V +M QG+L +K+Y+ +E+ASVDAFQGREKD II++CVRSND GIGFL+DPRRLNVA
Sbjct: 777 IVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIVTCVRSNDILGIGFLSDPRRLNVA 836
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK- 955
+TRAKYG++++GN KVL++ LW+ L+N YK +++L EGP+N LK + + PK +
Sbjct: 837 ITRAKYGLVLVGNAKVLARHDLWHELINHYKSKEMLYEGPINALKP--LNLALPKATIRT 894
Query: 956 KNNM 959
KNN+
Sbjct: 895 KNNI 898
>gi|406607433|emb|CCH41224.1| ATP-dependent helicase NAM7 [Wickerhamomyces ciferrii]
Length = 1038
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/867 (53%), Positives = 594/867 (68%), Gaps = 60/867 (6%)
Query: 93 FNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKD 152
F + LP HAC YCGIH+ + V+ CN C KWFCN + +TS SHII HLV +KH V+LH D
Sbjct: 92 FVENLPEHACAYCGIHNSSSVVKCNTCNKWFCNSKNNTSSSHIITHLVMSKHNVVSLHPD 151
Query: 153 GPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLI 212
LG+T LECY CG +N+FVLGF+ AK+++V+V+LCR PC+ Q KD WD +W LI
Sbjct: 152 SDLGDTTLECYNCGNKNVFVLGFVSAKSETVIVILCRLPCSQQ---KDSRWDTNEWTSLI 208
Query: 213 ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVL 272
DR LSW+ +PTE++ R +T++QI+KLE W+ N +AT QD+EKP + + +L
Sbjct: 209 EDRQLLSWVANIPTEEDTLNARIITNSQISKLEAKWRLNKDATIQDVEKPEEENEIVPIL 268
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
+RY D Y+YQ FGPLVKLEADYDK+LKESQ E+++V+W + LN K +A F+L+
Sbjct: 269 MRYTDAYEYQRSFGPLVKLEADYDKQLKESQALEHISVKWSLALNNKHLASFTLS----- 323
Query: 333 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQ 392
T E+ ++ VG
Sbjct: 324 --------------------------TFESSELKVAVG---------------------- 335
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG--APTEATTGFSVDFIWK 450
DE+ LRYS + W G +I+IP +E LEL ++ PT+ TT F+ +F+WK
Sbjct: 336 -DEMILRYSGINHEAWEAKGFIIRIPSAHQEEFTLELSTNHKNPPPTQCTTDFTAEFVWK 394
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
TS+DRMQ A++ FA D SVS YIYH+LLGH V+EV F LP FS P +LN SQ
Sbjct: 395 GTSYDRMQNAMKSFATDQLSVSGYIYHKLLGHEVNEVEFDIKLPSKFSIPGFAELNVSQA 454
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK+ +Q+PLSLIQGPPGTGKTVTSATI++ L +LVCAPSN+AVD L K+ +
Sbjct: 455 SAVKNVLQKPLSLIQGPPGTGKTVTSATIIHHLTNLNKDRILVCAPSNVAVDHLASKLDQ 514
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
GLKV+R+ AKSRE ++S V L+L N I+ +LKKLL+L+ E GELS+ D K Y
Sbjct: 515 LGLKVIRLTAKSREDVESSVQHLSLSNIIQK-SAKGQLKKLLRLRNELGELSAEDTKTYF 573
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L + EKS+L ADV+C TCVGAGD RL + F +ILIDES QA+EPEC++P++ GAKQ
Sbjct: 574 TLLRKKEKSILKQADVVCATCVGAGDRRLENVNFRTILIDESTQASEPECLIPLVHGAKQ 633
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
+ILVGDH QLGPV++ KKA AGL QSLFERLVVLG P RLEVQYRM+P LS+F SN F
Sbjct: 634 VILVGDHQQLGPVILDKKAGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFSSNMF 693
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
Y+GSLQNGV ++R+L FPWPV D PM+F+ G+EEI+GSGTS++NR EA N E+I
Sbjct: 694 YDGSLQNGVTKEQRQLPNSAFPWPVVDTPMMFWANFGREEISGSGTSFLNRIEAMNCERI 753
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TR R G++PEQIGVITPYEGQRA++VQ+MQ GS+ +Y ++EVASVDAFQGREKD
Sbjct: 754 ITRLFRDGVQPEQIGVITPYEGQRAYVVQYMQMNGSMDKDLYMDVEVASVDAFQGREKDF 813
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
II+SCVR+ND Q IGFL+DPRRLNVALTRAKYG++++GNP+ LSK LWN LL Y+E+
Sbjct: 814 IILSCVRANDQQNIGFLSDPRRLNVALTRAKYGVVILGNPRALSKNQLWNQLLLHYREKG 873
Query: 931 VLVEGPLNNLKESLILFSKPKQYFKKN 957
LVEG L++L+ S + ++P FK N
Sbjct: 874 CLVEGLLDSLQLSSVQLNRPNNRFKPN 900
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/894 (52%), Positives = 617/894 (69%), Gaps = 70/894 (7%)
Query: 79 ELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC--NICKKWFCNGRGHTSGSHII 136
+L FE+ ED + N +LP HAC+YCG+HDP+ V+ C C KWFCNG+G T+ SHI+
Sbjct: 141 QLNFEDPED--MDTINIDLPDHACRYCGLHDPSTVVRCMHPSCGKWFCNGKGKTTSSHIV 198
Query: 137 NHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQN 196
NHLV+AKH E++LH + P G+TVLECY CG +NIF+LGFIPAK +SVV+LLCR PCA
Sbjct: 199 NHLVKAKHNEISLHSESPFGDTVLECYNCGCKNIFLLGFIPAKMESVVILLCRDPCAMGG 258
Query: 197 SLKDMNWDQEQWKPLI-ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEAT 255
+ NWD +W PLI +DR FL+WLVK P+EQ+QQR RQ+T+ QI KLEE WK N T
Sbjct: 259 K-ESSNWDLNKWVPLINSDRCFLNWLVKTPSEQDQQRARQITTKQITKLEEEWKINPNVT 317
Query: 256 FQDLEKPGV---DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
+E+ G+ D P LLRYED YQYQ I PL+K+E++Y+K ++ES +Q+NV++RW
Sbjct: 318 IL-IEQHGLGKEDSAPLPTLLRYEDAYQYQEIITPLIKIESEYEKVMRESLSQDNVSIRW 376
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
D GL+KK A FS +++D Y+ + + G +KL D + E ++ VT +N
Sbjct: 377 DQGLSKKWTAIFSFSRSD---YELKVVPGDELKLIYAGDSQYPEWESTGRVT-----KIN 428
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS 432
+S AY E+ LEL +S
Sbjct: 429 DESEAYM--------------------------------------------EISLELYNS 444
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
APT+AT F +D +W+STSFDRM AL+ FAV S+S+++YH LLGH+ D L + +
Sbjct: 445 HNAPTKATGKFKIDMLWRSTSFDRMHAALKAFAVSTDSISSHLYHALLGHD-DRRLPKTN 503
Query: 493 --LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT--- 547
+P +F+ NLP LN SQ+ A ++ PLSLIQGPPGTGKTV S+ IV+ +VK
Sbjct: 504 VPMPTNFAVHNLPPLNNSQISAAMKVLKSPLSLIQGPPGTGKTVVSSFIVHHIVKHAIKK 563
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN-- 605
VLVCAPSN+A+DQLT K+H GLKVVR+C+K RE + SPV L LH+Q+ ++ +
Sbjct: 564 NEKVLVCAPSNVAIDQLTGKLHSIGLKVVRLCSKLREEVASPVEHLTLHHQVWQLDSHGR 623
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
EL K QLK+E GELS+ D+ RY LK++AE +L ADVI TCVGAGDPRL K+KF
Sbjct: 624 GELAKFKQLKDEQGELSTNDDHRYFALKRHAESKILKEADVIATTCVGAGDPRLSKLKFP 683
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
+LIDES QA+EPEC++P++LGAKQ++LVGDHCQLGPV++ KK AGLSQSLFERL+ L
Sbjct: 684 YVLIDESTQASEPECLIPLMLGAKQVVLVGDHCQLGPVLLAKKVIEAGLSQSLFERLINL 743
Query: 726 GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT 785
G PFRL QYRMHP LS+FPS+ FYEG L N + +R + I FPWP P+ PM FY +
Sbjct: 744 GHHPFRLTTQYRMHPSLSEFPSSTFYEGQLVNELSYKDRVYNDIKFPWPSPNNPMFFYNS 803
Query: 786 QGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
G EEI+ SGTS++NR EAS EKI T+ + G KP QIG+ITPYEGQR+FLV +MQ G
Sbjct: 804 TGAEEISSSGTSFINRMEASTTEKIVTKLLELGTKPHQIGIITPYEGQRSFLVNNMQKTG 863
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
L ++Y+EIEVASVD+FQGREKD II+SCVRSND+QGIGFL+DPRRLNVALTRA+YG+I
Sbjct: 864 KLSIELYREIEVASVDSFQGREKDFIILSCVRSNDNQGIGFLHDPRRLNVALTRARYGLI 923
Query: 906 VIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
++GN +VLS+ LWNNL+ +K ++VLVEG + NLK+S+++ KPK+ + + +
Sbjct: 924 ILGNARVLSRDQLWNNLICHFKSKEVLVEGTIQNLKQSMVVLQKPKKLYGEGKL 977
>gi|308505126|ref|XP_003114746.1| CRE-SMG-2 protein [Caenorhabditis remanei]
gi|308258928|gb|EFP02881.1| CRE-SMG-2 protein [Caenorhabditis remanei]
Length = 1067
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/982 (49%), Positives = 641/982 (65%), Gaps = 105/982 (10%)
Query: 2 SVDAYGPSS-QTLTFLDTEETDLIGGDTQGSEFDFTD-FTLPSQSQTQASQLDSVNQIQV 59
S D YG S +TLTF+DT+E I TQ S+FDF + F++P+QS L S
Sbjct: 4 SDDDYGKSGGETLTFVDTDEMG-ISATTQDSQFDFDNQFSVPTQSSQATDLLPST----- 57
Query: 60 NGKQNLDNSNLNLVSQKLHELQF-EEEEDDGNEFFNKE---LPPHACKYCGIHDPAYVIM 115
DN++ +L F + EE D + +E LP HAC+YCGI DP V
Sbjct: 58 ------DNTS---------DLPFLDVEESDSEKSLTEEQQNLPEHACRYCGISDPLCVAK 102
Query: 116 CNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGF 175
C +C KWFCN T G HI++H+VR++HKE HKD P G+T LECY CG +N+F LGF
Sbjct: 103 CTVCNKWFCNSNDGTPGGHIVHHMVRSQHKEAYTHKDSPCGDTQLECYRCGSKNVFNLGF 162
Query: 176 IPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQ 235
IP K D VVV++CRTPCA D NW E WK +IA++ LSW+V VP+E + R R+
Sbjct: 163 IPGKKDQVVVIICRTPCANVAFQNDDNWSPEDWKSVIAEKQLLSWIVNVPSEDQVARARK 222
Query: 236 VTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADY 295
+T+ Q +L E ++D + +D+ L R D Q + +
Sbjct: 223 ITATQAVRL--------EELWRDHPEATIDDLNKPGLDREPDHVQLKYM----------- 263
Query: 296 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLK 355
D +QY IF PLV +EA+YD+R+K
Sbjct: 264 ------------------------------------DAHQYSKIFRPLVAIEAEYDRRMK 287
Query: 356 ESQTQENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDELKLRYS--YDASKTWSGLG 412
ES +Q TVRW+ GL + +A+F L + DG M+L +GDEL+L++S D S+ W+ G
Sbjct: 288 ESASQAVGTVRWEQGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSE-WTKTG 346
Query: 413 HVIKIPDNFGDEVGLELKSSA-GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSV 471
V+KIPDN +EVG+E++ + E+ F+VD +W +T+FDR AL D ++V
Sbjct: 347 SVMKIPDNHSEEVGIEIRGVVERSVMESRIMFTVDVVWNATTFDRQYRALHALLNDPKAV 406
Query: 472 SAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTG 531
S Y+YH+LLG VDE++ + LP+ SAP LPDLN SQ+ AVK + RPLSLIQGPPGTG
Sbjct: 407 SPYLYHKLLGKPVDEMMLKFELPRRLSAPGLPDLNSSQMQAVKQVLTRPLSLIQGPPGTG 466
Query: 532 KTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
KTV SATIVY LV++T VLVC+PSNIAVD L EKIH+TGLKVVR+CA+SRE ++ V
Sbjct: 467 KTVVSATIVYHLVQKTDGNVLVCSPSNIAVDHLAEKIHKTGLKVVRLCARSREHTETTVP 526
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
+L L +Q++ M EL+KL+QLKEE GEL S D+ R+ LK+ E LL ADVICCTC
Sbjct: 527 YLTLQHQMKVMG-GPELQKLIQLKEEIGELESKDDSRFLQLKRVKEHELLAAADVICCTC 585
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
A D RL KI+ ++LIDES QATEPE +V ++ G +QL+LVGDHCQLGPVV+CKKAA
Sbjct: 586 SSAADARLTKIRTRTVLIDESTQATEPEILVSIVRGVRQLVLVGDHCQLGPVVICKKAAM 645
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC----------- 760
AGLSQSLFERLV+LGIRPFRL+VQYRMHP LS+FPSN FY+GSLQNGV
Sbjct: 646 AGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPSNAFYDGSLQNGVTESELELFFVYL 705
Query: 761 ----ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
AD+R++ +D+ WP P+KP F+ G EE++ SGTS++NRTEA+NVEK+ ++ I+
Sbjct: 706 RPIFADDRQMKGVDWHWPTPNKPAFFWHCSGAEELSSSGTSFLNRTEAANVEKLVSKLIK 765
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCV 876
G++P QIGVITPYEGQR+F+V +M QG+L +K+Y+ +E+ASVDAFQGREKD II++CV
Sbjct: 766 GGVQPNQIGVITPYEGQRSFIVNYMHTQGTLNSKLYESVEIASVDAFQGREKDYIIVTCV 825
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
RSND GIGFLNDPRRLNVA+TRAKYGI+V+GN KVL++ LW L+N YK++ +L EGP
Sbjct: 826 RSNDILGIGFLNDPRRLNVAITRAKYGIVVVGNAKVLARHELWYELINHYKKKDMLYEGP 885
Query: 937 LNNLKESLILFSKPKQYFKKNN 958
+N LK ++ + PK K N
Sbjct: 886 INALK--VLNMTLPKPTLKTQN 905
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/852 (53%), Positives = 594/852 (69%), Gaps = 57/852 (6%)
Query: 104 YCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY 163
YCGIH+P+ V+ C KWFCNGR H +GS II HLV++K+KEV LH+D PLG+TVLECY
Sbjct: 2 YCGIHNPSCVVKCLSTNKWFCNGRVHGTGSCIILHLVKSKNKEVQLHRDSPLGDTVLECY 61
Query: 164 TCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVK 223
G RN+FVLGF+P K+++ VVLL R +++D+N D QW+P++ DR + WLVK
Sbjct: 62 ASGTRNLFVLGFVPVKSENTVVLLARDTPPNHPTIRDLNLDLSQWQPIVEDRGLVPWLVK 121
Query: 224 VPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQN 283
PTE E R R + QI KLEE+WK A DL++ E DG
Sbjct: 122 QPTEPELLRARHLKLDQINKLEEMWKTKPAAGVDDLDEKATVEG---------DG----- 167
Query: 284 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPL 343
+ VT++++ D QYQ +F PL
Sbjct: 168 --------------------VTQPVTLKYE------------------DSAQYQAVFEPL 189
Query: 344 VKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYD 403
VKLEADYD+ +KESQ+++++T+RWD GLN K +AYF + D +++LMQGDELKLR+
Sbjct: 190 VKLEADYDRSIKESQSRDDITLRWDWGLNAKRVAYFYFPRDDNELKLMQGDELKLRHKNA 249
Query: 404 ASK-TWSGLGHVIKIPDNFGDEVGLELKSSAG-APTEATTGFSVDFIWKSTSFDRMQLAL 461
+++ W LGHV+ + +EV LEL ++ P + T GFSVDF+W+ TSFDRM+ AL
Sbjct: 250 SNRGAWEALGHVLTYQQS--EEVCLELFTNVSDVPEDCTVGFSVDFVWRGTSFDRMRNAL 307
Query: 462 RKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH-FSAPNLPDLNRSQVYAVKHAIQRP 520
F S+S Y+YH +LGH V+ V + LPK P+LP+LN SQ++AVK +Q+P
Sbjct: 308 NTFRKYSASISGYLYHLILGHPVESVTLKIPLPKAGLGVPSLPELNHSQLHAVKSVLQQP 367
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCA 580
LSLIQGPPGTGKTVTSA IVY L VLV APSN+AVDQL K+ +TGLKVVR+CA
Sbjct: 368 LSLIQGPPGTGKTVTSAAIVYHLAHSGTGQVLVAAPSNVAVDQLAHKMDQTGLKVVRLCA 427
Query: 581 KSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSL 640
K+REA+ SPV L LH Q+ + L+KLL L+ G L+++DEK + L++ E +
Sbjct: 428 KTREAVASPVEHLTLHYQVHGCVLVGRLRKLLALRGAQGGLNASDEKELKSLRRRLEMEV 487
Query: 641 LDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQL 700
L+NADV+C TCVGAGDPRL +F +LIDES QA EPEC++P++LGAKQ+ILVGDHCQL
Sbjct: 488 LENADVVCTTCVGAGDPRLSHFRFQHVLIDESTQAAEPECLIPMVLGAKQVILVGDHCQL 547
Query: 701 GPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
GPV+MCKKAA AGL QSLFERL +LG++P RL+VQYRMHP LS+FPSN FYEG+LQNG
Sbjct: 548 GPVIMCKKAAEAGLCQSLFERLRLLGVKPIRLQVQYRMHPCLSEFPSNTFYEGTLQNGTG 607
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK 820
ER+L+ +DFPWP PDKPM+F+V G EEI+ S TSY+NRTEA+ VEK+ TRF++ GM
Sbjct: 608 MGERRLAGVDFPWPNPDKPMMFWVQLGAEEISASSTSYLNRTEAAAVEKVVTRFLQNGMS 667
Query: 821 PEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND 880
P QIGVITPYEGQRA +V M G+ +Y+EIEV+SVDAFQGREKD+I++SCVRSN+
Sbjct: 668 PAQIGVITPYEGQRAHVVSVMVRNGTARQDLYKEIEVSSVDAFQGREKDIIVLSCVRSNE 727
Query: 881 HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNL 940
H IGFL+DPRRLNVALTRA++G++V+GNP+VLS+QPLWN+LL ++KE L EGPL NL
Sbjct: 728 HSSIGFLSDPRRLNVALTRARFGLVVLGNPRVLSRQPLWNSLLQYFKEHGCLAEGPLTNL 787
Query: 941 KESLILFSKPKQ 952
K S++ KPK+
Sbjct: 788 KASMVQLHKPKR 799
>gi|366987891|ref|XP_003673712.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
gi|342299575|emb|CCC67331.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
Length = 992
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/859 (52%), Positives = 597/859 (69%), Gaps = 60/859 (6%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCG+ P VI CN C KWFCN + T+ SHI+NHLV + H V+LH D LG+T+
Sbjct: 70 HACAYCGVDSPTCVIKCNSCNKWFCNSKNGTNSSHIVNHLVLSHHNVVSLHPDSDLGDTI 129
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK+++VVVLLCR PCA K++NWD +QW+PLI DR FLS
Sbjct: 130 LECYNCGCKNVFLLGFVSAKSEAVVVLLCRMPCA---QTKNVNWDTDQWQPLIEDRQFLS 186
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ + P+E+E+ + R +T +QI+KLE W+ N +AT D++ P E+ +LLRY+D Y
Sbjct: 187 WVAEEPSEEEKLKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEELPPLLLRYQDAY 246
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L+
Sbjct: 247 EYQRSYGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLASFALS------------ 294
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLR 399
T E+ ++ VG DE+ L
Sbjct: 295 -------------------TFESNELKVAVG-----------------------DEMILW 312
Query: 400 YSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
YS W G G+++++P++F D LELK S PT TTGF+ +FIWK TS+DRMQ
Sbjct: 313 YSGVQHPDWEGRGYIVRLPNSFQDTFTLELKPSKVPPPTNLTTGFTAEFIWKGTSYDRMQ 372
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
+L+KFA+D +S+S Y+Y+++LGH V ++ F +PK FS P+ LN SQ AV+H +Q
Sbjct: 373 DSLKKFAIDKKSISGYLYYKILGHQVVDITFDVPMPKQFSIPHFTQLNDSQSNAVQHVLQ 432
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RPLSLIQGPPGTGKTVTSATIVY L K VLVCAPSN+AVD L K+ GLKVVR+
Sbjct: 433 RPLSLIQGPPGTGKTVTSATIVYHLSKIHKERVLVCAPSNVAVDHLAAKLRDLGLKVVRL 492
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
AKSRE ++S VS LALHN + EL+KLL LKEE GELS++D K++ L + E
Sbjct: 493 TAKSREDVESSVSNLALHNLVAR-SSKGELRKLLTLKEEVGELSASDTKKFVKLVRRTEA 551
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
+L ADV+CCTCVGAGD R L KF ++LIDES QATEPEC++P+I GAKQ+ILVGDH
Sbjct: 552 EILAKADVVCCTCVGAGDKR-LDTKFRTVLIDESTQATEPECLIPIIKGAKQVILVGDHQ 610
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPV++ +KA AGL QSLFERL+ LG P RLEVQYRM+P LS+FPSN FYEGSLQNG
Sbjct: 611 QLGPVILERKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQNG 670
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V ++R + FPWP+ D PM+F+ G+EE++ +GTSY+NR EA N E+I T+ R G
Sbjct: 671 VTIEQRTVPNSTFPWPIHDVPMMFWANYGREELSSNGTSYLNRIEAMNCERIITKLFRDG 730
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+KPEQIGVITPYEGQRA+++Q+MQ GSL ++Y ++EVASVDAFQGREKD II+SCVR+
Sbjct: 731 VKPEQIGVITPYEGQRAYILQYMQMNGSLDKEMYVKVEVASVDAFQGREKDYIILSCVRA 790
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
ND Q IGFL DPRRLNV LTRAKYG++++GNP+ LSK LWN+LL ++E+ LVEG L+
Sbjct: 791 NDQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLSKNILWNHLLLHFREKGCLVEGTLD 850
Query: 939 NLKESLILFSKPKQYFKKN 957
NL+ + ++PK ++N
Sbjct: 851 NLQLCTVQLTRPKPKRQQN 869
>gi|410074371|ref|XP_003954768.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
gi|372461350|emb|CCF55633.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
Length = 995
Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/853 (53%), Positives = 593/853 (69%), Gaps = 60/853 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGI P VI CN C KWFCN + T+ SHI+NHLV + H V+LH + LG+TV
Sbjct: 72 HACAYCGIDSPTCVIKCNSCNKWFCNSKNGTNSSHIVNHLVLSHHNVVSLHPESDLGDTV 131
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK+++VVVLLCRTPCA K+ NWD +QW+PLI +R FLS
Sbjct: 132 LECYNCGRKNVFLLGFVSAKSEAVVVLLCRTPCA---QTKNANWDTDQWQPLIEERQFLS 188
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ + PTE+++ + R +T +QI+KLE W+ N +AT D++ P E+ +LLRY+D Y
Sbjct: 189 WVAEEPTEEDKVKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEEISPLLLRYQDAY 248
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A FSL+
Sbjct: 249 EYQRSYGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLASFSLS------------ 296
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLR 399
T E+ ++ VG DE+ L
Sbjct: 297 -------------------TFESNELKVAVG-----------------------DEMILW 314
Query: 400 YSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
YS W G G+++++P++F D LELK S P T+GF+ +FIWK TS+DRMQ
Sbjct: 315 YSGLNHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPIHLTSGFTAEFIWKGTSYDRMQ 374
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+KFAVD +S+S Y+Y+++LGH V ++ F LPK S P LN SQ AVK +Q
Sbjct: 375 DALKKFAVDKKSISGYLYYKILGHEVVDISFDVPLPKEMSIPQFTKLNDSQSNAVKKVLQ 434
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+AVD L K+ GLKVVR+
Sbjct: 435 RPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVRL 494
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
AKSRE ++S VS LALHN + ELKKLL++K+E GELS+AD KR+ L + AE
Sbjct: 495 TAKSREDVESSVSSLALHNLVARSSQ-GELKKLLKMKDEIGELSAADTKRFVKLVRKAES 553
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
+L ADV+CCTCVGAGD R L KF ++LIDES QA+EPEC++P++ GAKQ+ILVGDH
Sbjct: 554 EILAKADVVCCTCVGAGDKR-LDAKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQ 612
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+P LS+FPSN FYEGSLQNG
Sbjct: 613 QLGPVILERKAADAGLRQSLFERLISLGHVPIRLEVQYRMNPNLSEFPSNMFYEGSLQNG 672
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V ++R +S FPWP+ PM+F+ G+EEI+ +GTSY+NR EA N E+I TR + G
Sbjct: 673 VTIEQRTVSNSTFPWPIHGVPMMFWANYGREEISANGTSYLNRIEAMNCERIITRLFKDG 732
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+KPEQIGVITPYEGQRA+++Q+MQ G L +Y ++EVASVDAFQGREKD II+SCVR+
Sbjct: 733 VKPEQIGVITPYEGQRAYILQYMQMNGVLDKNLYVKVEVASVDAFQGREKDYIILSCVRA 792
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N+ Q IGFL DPRRLNV LTRAKYG+I++GNP+ LS+ LWN+LL ++E+ LVEGPL+
Sbjct: 793 NEQQAIGFLRDPRRLNVGLTRAKYGLIILGNPRSLSRNLLWNHLLIHFREKGCLVEGPLD 852
Query: 939 NLKESLILFSKPK 951
NL+ S + +KP+
Sbjct: 853 NLQLSTVQLTKPQ 865
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/863 (52%), Positives = 599/863 (69%), Gaps = 65/863 (7%)
Query: 97 LPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRG-HTSGSHIINHLVRAKHKEVTLHKDG 153
LP HAC YCGIH+P V+ C+I C +WFCNG+G + GSHI+ H V+++HKE++LH D
Sbjct: 209 LPQHACAYCGIHEPECVVKCSIKECNRWFCNGKGINEYGSHIMLHQVKSRHKEISLHPDS 268
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
PL +TV+ECY C +NIF+LGF+ AK ++V++LLCR PC +Q S+KD WD E W+ LI
Sbjct: 269 PLKDTVIECYNCSSKNIFLLGFVSAKQEAVIILLCREPCLSQLSVKDSKWDMENWQALIE 328
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
+++ LSWLVK P++ E +R R++T++QI KLEE+WK EKP V+
Sbjct: 329 NKAILSWLVKFPSDFEFKRSRKITASQINKLEELWK----------EKPTAQVGDLNVI- 377
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDG 333
++ + + V +R+ D
Sbjct: 378 --------------------------QQEKAMQPVLLRYK------------------DP 393
Query: 334 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQG 393
QY++IF PL+KLEADYDK KESQTQ N+ VR+D LNKK A+F D ++RL+ G
Sbjct: 394 KQYKDIFEPLIKLEADYDKSFKESQTQRNIRVRFDYSLNKKKQAFFIFPNED-NIRLVPG 452
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
DELKL Y Y+ W GH+++I +E+ LELK+ G P + F+++FIWKSTS
Sbjct: 453 DELKLVYEYEGQPKWQSRGHIVRI---VNEEICLELKNPKGCPNDPDIRFTIEFIWKSTS 509
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
FDRM+LAL+ F D+QS+S YI+++LLG+N E + ++PKH S P LP+LN Q+ AV
Sbjct: 510 FDRMRLALKIFMRDEQSLSNYIFYKLLGYNTQEQFIKTNIPKHLSVPGLPELNHFQMNAV 569
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K A+ PL LIQGPPGTGKTVTS T+V LVKQ VLVCAPSNIAVDQLT+KI+ TG+
Sbjct: 570 KKALITPLCLIQGPPGTGKTVTSTTLVTHLVKQKMGKVLVCAPSNIAVDQLTDKINSTGI 629
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETGELSSADEKRYRM 631
KVVR+CA+SRE++ S V +L+LH QI+ + +++L+ KEE EL+ +E++ +
Sbjct: 630 KVVRMCARSRESVSSNVDYLSLHEQIKYLSHGPFKLMQELILKKEEQNELTEKEERQLKE 689
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
LK+ AE +L NA+VIC TCV A D RL KF +LIDE+ QATEPE ++P++ GAK +
Sbjct: 690 LKRQAEDEILKNAEVICTTCVAAFDRRLRNFKFSQVLIDEATQATEPETLIPILRGAKHV 749
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDHCQLGPV+MCKKAA+AGL+QSLFERLV LGIRP RL+VQYRMHP LS FPS FY
Sbjct: 750 ILVGDHCQLGPVIMCKKAAKAGLNQSLFERLVCLGIRPIRLQVQYRMHPVLSAFPSMTFY 809
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EGSLQNG+ +R LS F WP +KPM+FY + EEI+ SGTS++NR EA NVE +
Sbjct: 810 EGSLQNGISKQDRILSDFKFQWPASEKPMMFYHSISNEEISASGTSFLNRQEAYNVEALV 869
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T+F++ +KPEQIG+ITPYEGQ+AF+ +MQ G L +Y+EIEVASVD+FQGREKD I
Sbjct: 870 TQFLKFDLKPEQIGIITPYEGQKAFITSYMQRSGQLDPSLYKEIEVASVDSFQGREKDFI 929
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
++SCVRSN+ GIGFLNDPRRLNVALTRAKYG+++ GN KVLSK LWNNLLN +K Q
Sbjct: 930 LLSCVRSNEASGIGFLNDPRRLNVALTRAKYGLVIFGNAKVLSKHDLWNNLLNEFKNQGC 989
Query: 932 LVEGP-LNNLKESLILFSKPKQY 953
LVEGP + NLK +I+ +P +Y
Sbjct: 990 LVEGPNIFNLKPCVIVLRRPVKY 1012
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/577 (75%), Positives = 498/577 (86%), Gaps = 6/577 (1%)
Query: 388 MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDN------FGDEVGLELKSSAGAPTEATT 441
MRLMQGDE+ LRY D + W G+GHVIK+PDN +GDE+ +EL+SS GAP E T
Sbjct: 1 MRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNLTQRPDYGDEIAIELRSSVGAPVEVTH 60
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A
Sbjct: 61 NFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQG 120
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAV
Sbjct: 121 LPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAV 180
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
DQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+KL QLK+ETGEL
Sbjct: 181 DQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGEL 240
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
SSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECM
Sbjct: 241 SSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECM 300
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPE 741
VPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP
Sbjct: 301 VPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPA 360
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NR
Sbjct: 361 LSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNR 420
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
TEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVD
Sbjct: 421 TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVD 480
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
AFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+
Sbjct: 481 AFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNH 540
Query: 922 LLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
LL++YKEQK LVEGPLNNL+ESL+ FSKP++ N
Sbjct: 541 LLSYYKEQKALVEGPLNNLRESLMQFSKPRKLVNTVN 577
>gi|361128156|gb|EHL00106.1| putative Regulator of nonsense transcripts 1 like protein [Glarea
lozoyensis 74030]
Length = 898
Score = 935 bits (2416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/760 (59%), Positives = 560/760 (73%), Gaps = 60/760 (7%)
Query: 201 MNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLE 260
M+WD +W+PLI DRSFL WLV VPT+ EQ R R +T IAKLEE+WKDN+ AT DLE
Sbjct: 1 MSWDISRWQPLIEDRSFLPWLVSVPTDSEQLRARHLTPPMIAKLEEMWKDNSSATIADLE 60
Query: 261 KP-GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKK 319
K G+D+DP VLL+ YD
Sbjct: 61 KAAGIDDDPAPVLLK--------------------YD----------------------- 77
Query: 320 SIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 379
D YQYQN+FGPLVK+EADYD++LKE+Q+++ + +RWD GLN K +A F
Sbjct: 78 ------------DAYQYQNVFGPLVKIEADYDRKLKEAQSEDGLIIRWDYGLNNKHLASF 125
Query: 380 SLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK---SSAGA 435
L K + GD++L GDE++L+Y + W G+G+VIKIP+N DEV +EL+ +
Sbjct: 126 VLPKIELGDVKLAVGDEMRLKYKGELRPVWEGVGYVIKIPNNQSDEVTIELRKVGNDKSV 185
Query: 436 PTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPK 495
PTE T FS D++WK+TS+DRMQLA+R FAVD+ SVS YI+H+LLGH V + +PK
Sbjct: 186 PTECTHNFSADYVWKATSYDRMQLAMRTFAVDEMSVSGYIFHKLLGHEVAAAPMKIQMPK 245
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
FS P LP+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSATI+Y L K G VLVCA
Sbjct: 246 KFSVPGLPELNSSQINAVKSVLQKPLSLIQGPPGTGKTVTSATIIYHLAKVNGGQVLVCA 305
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
PSN+AVDQL E+IHRTGLKVVR+ AKSRE ++S V FL+LH Q+R + N EL KL QLK
Sbjct: 306 PSNVAVDQLCERIHRTGLKVVRLTAKSREDVESTVGFLSLHEQVRMNDSNLELTKLSQLK 365
Query: 616 EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQA 675
E GELSS DEK+++ L + AE+ +L++ADVICCTCVGAGDPRL K+KF ++LIDES Q+
Sbjct: 366 GELGELSSQDEKKFKTLTRAAEREILNSADVICCTCVGAGDPRLAKMKFRTVLIDESTQS 425
Query: 676 TEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQ 735
EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG+ P RL VQ
Sbjct: 426 AEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGLAPIRLNVQ 485
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSG 795
YRMHP LS+FPSN FYEGSLQNGV +R +DFPWPV D PM+F+ G EEI+ SG
Sbjct: 486 YRMHPCLSQFPSNMFYEGSLQNGVTMQQRLRRDVDFPWPVGDTPMMFWSNLGNEEISASG 545
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
TSY+NRTEASNVEKI TRF + G++P+ IGVITPYEGQR+F+V MQ G+ + Y+EI
Sbjct: 546 TSYLNRTEASNVEKIVTRFFKAGVQPQDIGVITPYEGQRSFVVSSMQNTGTFKKENYKEI 605
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
EVASVDAFQGREKD I++SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK
Sbjct: 606 EVASVDAFQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSK 665
Query: 916 QPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
PLW+ LL +KE+ LVEGPL+NL+ SL+ FS+PK ++
Sbjct: 666 HPLWHYLLLHFKERNCLVEGPLSNLQTSLLQFSRPKTTYR 705
>gi|365989598|ref|XP_003671629.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
gi|343770402|emb|CCD26386.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
Length = 993
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/860 (52%), Positives = 597/860 (69%), Gaps = 62/860 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGI P V+ CN C +WFCN + T+ SHI+NHLV ++H V+LH D LG+TV
Sbjct: 70 HACSYCGIDSPTCVVKCNSCDRWFCNSKNGTTSSHIVNHLVLSRHNVVSLHPDSDLGDTV 129
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK+++VVVLLCR PCA K++NWD +QW+PLI DR FLS
Sbjct: 130 LECYNCGCKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNVNWDTDQWQPLIEDRQFLS 186
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ + P+E+E+ + R +T +QI+KLE W+ N +AT D++ P E+ +LLR
Sbjct: 187 WVAEEPSEEEKLKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEEIPPLLLR----- 241
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
YQ D Y+YQ
Sbjct: 242 -YQ-------------------------------------------------DAYEYQRS 251
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKL 398
+GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L+ + ++++ GDE+ L
Sbjct: 252 YGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLASFALSTFETNELKVAVGDEMIL 311
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRM 457
YS W G G+++++P++F D LELK S PT TTGF+ +FIWK TS+DRM
Sbjct: 312 WYSGLQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRM 371
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q +L+KFAVD +S+S Y+Y+++LGH V ++ F +PK FS P+ LN SQ AV+H +
Sbjct: 372 QDSLKKFAVDKKSISGYLYYKILGHQVVDITFDVPMPKQFSIPHFTQLNESQSKAVQHVL 431
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATIVY L K VLVCAPSN+AVD L K+ GLKVVR
Sbjct: 432 QRPLSLIQGPPGTGKTVTSATIVYHLTKIHKDKVLVCAPSNVAVDHLAAKLRDLGLKVVR 491
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE ++S VS LALHN + EL+KLL+LKEE GELS++D KR+ L + E
Sbjct: 492 LTAKSREDVESSVSNLALHNLVARGS-KGELRKLLRLKEEVGELSASDTKRFVKLVRKTE 550
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+L ADV+CCTCVGAGD RL KF ++LIDES QATEPEC++P++ GAKQ+ILVGDH
Sbjct: 551 SEILAKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQATEPECLIPIVKGAKQVILVGDH 609
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KA AGL QSLFERL+ LG PFRLE+QYRM+P LS+FPSN FYEGSLQN
Sbjct: 610 KQLGPVILERKAGDAGLKQSLFERLISLGHIPFRLEIQYRMNPYLSEFPSNMFYEGSLQN 669
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV ++R +S FPWP+ PM+F+ G+EE++ +GTSY+NR EA N E+I T+ +
Sbjct: 670 GVTIEQRTVSDSTFPWPIHGVPMMFWANYGREELSSNGTSYLNRIEAMNCERIITKLFKD 729
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+KPEQIGVITPYEGQRA+++Q+MQ G++ +Y ++EVASVDAFQGREKD II+SCVR
Sbjct: 730 GVKPEQIGVITPYEGQRAYILQYMQMNGAMDKDLYVKVEVASVDAFQGREKDYIILSCVR 789
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
+ND Q IGFL DPRRLNV LTRAKYG++++GNP LS+ LWN+LL ++E+ LVEG L
Sbjct: 790 ANDQQAIGFLRDPRRLNVGLTRAKYGLVILGNPMSLSRNLLWNHLLIHFREKGCLVEGTL 849
Query: 938 NNLKESLILFSKPKQYFKKN 957
+NL+ + S+P+ ++N
Sbjct: 850 DNLQLCTVQLSRPQPKKRQN 869
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f. nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f. nagariensis]
Length = 1135
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/989 (49%), Positives = 632/989 (63%), Gaps = 113/989 (11%)
Query: 13 LTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLNL 72
LTF D T D F DFT Q +QA + + ++ L
Sbjct: 86 LTFQDYGVTQ----DVHPGTLQFNDFT---QGVSQA--------LSWGAPVGIASTAQRL 130
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
Q + F+E E++ ++ P AC YCGIH+PA V+ C KWFCNGR H SG
Sbjct: 131 AQQLRFQEAFDEAEEEPTVTVPEKPPEWACAYCGIHNPACVVKCLSTNKWFCNGRVHGSG 190
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
S II HLV++K+KEV LHKD PLG+TVLECY G RN+FVLGF+P K+++ VVLL R
Sbjct: 191 SCIILHLVKSKNKEVQLHKDSPLGDTVLECYASGSRNLFVLGFVPVKSENTVVLLARDTP 250
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIA---------- 242
+++D+N D QW+P++ DR + WLVK P EQE R R +T AQ+
Sbjct: 251 PNHPTIRDLNLDLSQWQPIVEDRGLVPWLVKQPGEQELLRARHLTLAQVLVGNRSVMLVN 310
Query: 243 KLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES 302
KLEE+WK A GVD+ L E+
Sbjct: 311 KLEELWKTRPNA--------GVDD--------------------------------LDEA 330
Query: 303 QTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 362
++ V+ +A D QYQ +F PLVKLEADYD+ +KESQ++++
Sbjct: 331 SGGDDGAVQ-------------PVALKYEDSAQYQAVFEPLVKLEADYDRAIKESQSRDD 377
Query: 363 VTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK-TWSGLGHVIKIPDNF 421
+++RWD GLN K +AYF + D +++LMQGDELKLR+ ++ W LGHV+ +
Sbjct: 378 ISLRWDWGLNNKRVAYFYFPRDDNELKLMQGDELKLRHKNAGNRGPWEALGHVLTYQQS- 436
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
+EV LEL ++ P + T G+SVDF+W+ TS+DRM+ AL F S+S Y+YH +LG
Sbjct: 437 -EEVCLELFAN-DVPEDCTVGYSVDFVWRGTSYDRMRNALNTFRKYSASISGYLYHLILG 494
Query: 482 HNVDEVLFRCHLPKH-FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV 540
H V+ V + LPK F+ P LP+LN SQ++AVK + +PLSLIQGPPGTGKTVTSA IV
Sbjct: 495 HPVESVTLKIPLPKAGFAVPTLPELNHSQLHAVKSVLHQPLSLIQGPPGTGKTVTSAAIV 554
Query: 541 YQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR 600
Y L VLV APSN+AVDQL K+ +TGLKVVR+CAK+REA+ SPV L LH Q+
Sbjct: 555 YHLAHSGTGQVLVAAPSNVAVDQLAHKMDQTGLKVVRLCAKTREAVASPVEHLTLHYQVT 614
Query: 601 NMEM--NSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
+M + L+KLL L+ G L+++DEK + L++ E +L+NADV+C TCVGAGDPR
Sbjct: 615 HMAVPEGERLRKLLALRGAQGGLNASDEKELKSLRRRLEMEVLENADVVCTTCVGAGDPR 674
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQL--------------------------- 691
L +F +LIDES QA EPEC++P++LGAKQL
Sbjct: 675 LANFRFQHVLIDESTQAAEPECLIPMVLGAKQLPHAAQWVFLLLASPHVHRWRTSMLTAK 734
Query: 692 -ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
ILVGDHCQLGPV+MCKKAA AGL QSLFERL +LG++P RL+VQYRMHP LS+FPSN F
Sbjct: 735 VILVGDHCQLGPVIMCKKAAEAGLCQSLFERLRLLGVKPIRLQVQYRMHPCLSEFPSNTF 794
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEG+LQNG ER+L +DFPW PDKPM+F+V G EEI+ SGTSY+NRTEA+ VEK+
Sbjct: 795 YEGTLQNGTGMGERRLVGVDFPWHNPDKPMMFWVQLGAEEISASGTSYLNRTEAAAVEKV 854
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TRF++ GM P QIGVITPYEGQRA +V M G++ +Y+EIEV+SVDAFQGREKD+
Sbjct: 855 VTRFLQNGMSPSQIGVITPYEGQRAHVVSVMVRNGAVRQDLYKEIEVSSVDAFQGREKDI 914
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
I++SCVRSN+H IGFL+DPRRLNVALTRA+YG++V+GNP+VLS+QPLWN+LL ++KE
Sbjct: 915 IVLSCVRSNEHSSIGFLSDPRRLNVALTRARYGLVVLGNPRVLSRQPLWNSLLQYFKESG 974
Query: 931 VLVEGPLNNLKESLILFSKPKQYFKKNNM 959
LVEGPL NLK S++ KPK+ F + +
Sbjct: 975 CLVEGPLTNLKPSMVQLHKPKRVFDRGSF 1003
>gi|444316488|ref|XP_004178901.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
gi|387511941|emb|CCH59382.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
Length = 1056
Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/854 (52%), Positives = 591/854 (69%), Gaps = 60/854 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC +CGI PA VI CN CKKWFCNG+ T+ SHI+NHLV + H V+LH + LG+T+
Sbjct: 131 HACAFCGIDKPASVIKCNTCKKWFCNGKNGTNSSHIVNHLVLSHHNVVSLHPESDLGDTI 190
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG RN F+LGF+ AK+D+VVVLLCR PCA K+ NWD +QW+PLI +R FLS
Sbjct: 191 LECYNCGCRNAFILGFVSAKSDAVVVLLCRVPCA---QTKNANWDTDQWQPLIENRQFLS 247
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ + P+++E+ R +T +QI+KLE W+ N +AT D++ P E+ VLLRY+D Y
Sbjct: 248 WIAEEPSDEEKLNARLITPSQISKLEAKWRSNKDATINDIDLPEQQEEIPPVLLRYQDAY 307
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + + F+L+
Sbjct: 308 EYQRSYGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLVSFALS------------ 355
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLR 399
T E+ ++ VG DE+ +R
Sbjct: 356 -------------------TFESNELKVAVG-----------------------DEMIIR 373
Query: 400 YSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
YS W G G+++++P++F DE LELK + PT TGF+ +FIWK TS+DRMQ
Sbjct: 374 YSGVQYPEWEGRGYIVRLPNSFQDEFTLELKPNKEPPPTHLGTGFTAEFIWKGTSYDRMQ 433
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+KFA+D +S+S Y+Y+++LGH V ++ F +P FS P LN SQ AV++ +Q
Sbjct: 434 DALKKFAIDKKSISGYLYYKILGHQVVDIAFDISMPSEFSIPKFAQLNSSQTNAVRNVLQ 493
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
+PLSLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L K+ GLKVVR+
Sbjct: 494 KPLSLIQGPPGTGKTVTSATIIYHLSKLHSERILVCAPSNVAVDHLATKLRDLGLKVVRL 553
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
AKSRE ++S VS LALHN + EL+KLL+LKEE GELS+ D K++ L + E
Sbjct: 554 TAKSREDVESSVSDLALHNLVAR-SSKGELRKLLRLKEEVGELSANDTKKFVKLVRKTES 612
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
+L ADV+CCTCVGAGD R L KF ++LIDES QA+EPEC++P++ GAKQ+ILVGDH
Sbjct: 613 EILKKADVVCCTCVGAGDKR-LDTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQ 671
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPV++ +KA AGL QSLFERL+ LG P RLEVQYRM+P LS+FPSN FYEGSLQNG
Sbjct: 672 QLGPVILERKAGDAGLKQSLFERLISLGHVPIRLEVQYRMNPFLSEFPSNMFYEGSLQNG 731
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V D+R + FPWP+ D PM+F+ G+EEI+ +GTSY+NR EA N E++ TR + G
Sbjct: 732 VTLDQRTVPTSTFPWPIHDVPMMFWANYGREEISANGTSYLNRIEAMNCERVITRLFKDG 791
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+KPEQIGVITPYEGQRA+++Q+MQ G+L +Y +EVASVDAFQGREKD II+SCVR+
Sbjct: 792 VKPEQIGVITPYEGQRAYILQYMQMNGTLDKDLYINVEVASVDAFQGREKDYIILSCVRA 851
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N+ Q IGFL+DPRR+NV LTRAKYG++V+GNP+ LS+ LWN+LL ++++ LVEG L+
Sbjct: 852 NEQQAIGFLSDPRRMNVGLTRAKYGLVVLGNPRSLSRNILWNHLLIHFRQKGCLVEGSLD 911
Query: 939 NLKESLILFSKPKQ 952
NL+ + ++ +Q
Sbjct: 912 NLQLCTVQLTRNRQ 925
>gi|367000487|ref|XP_003684979.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
gi|357523276|emb|CCE62545.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
Length = 990
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/861 (52%), Positives = 593/861 (68%), Gaps = 63/861 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGR-GHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGI P V+ CN CKKWFCN + G SGSHI+NHLV + H V+LH D LG+T
Sbjct: 73 HACGYCGIDSPTSVVKCNTCKKWFCNSKNGSLSGSHIVNHLVLSHHNVVSLHPDSDLGDT 132
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG +N F+LGF+ AK+++VVVLLCR PCA K++NWD +QW+P+I +R FL
Sbjct: 133 VLECYNCGCKNAFLLGFVSAKSEAVVVLLCRIPCA---QTKNVNWDTDQWQPIIENRQFL 189
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
SW+ + PTE+E+ R +T +QI+KLE W+ N +AT D++ P E+ VLLRY+D
Sbjct: 190 SWVAEEPTEEEKLTSRLITPSQISKLEAKWRSNKDATINDIDIPESQEEIVSVLLRYQDA 249
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
Y+YQ +GPL+KLEADYDK+LKESQ E++++ W + LN + +A F+L+
Sbjct: 250 YEYQRSYGPLIKLEADYDKQLKESQALEHISIEWSIALNNRHMASFALS----------- 298
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
T E+ ++ VG DE+ L
Sbjct: 299 --------------------TFESNELKVAVG-----------------------DEMIL 315
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRM 457
RYS W G G+++ +P++F DE LELK S P TGF+ +FIWK TS+DRM
Sbjct: 316 RYSGMQHPEWEGRGYIVHLPNSFKDEFSLELKPSKTPPPIHLGTGFTAEFIWKGTSYDRM 375
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q AL+ FAVD +S+S Y+Y+++LGH V ++ F +PK S P+ LN SQ AV + +
Sbjct: 376 QDALKTFAVDKKSISGYLYYKILGHEVLDIAFDVPIPKELSIPHFAQLNASQASAVANVL 435
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
Q+PLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+AVD L K+ GLKVVR
Sbjct: 436 QKPLSLIQGPPGTGKTVTSATIVYHLSKSHKDRILVCAPSNVAVDHLATKLRDLGLKVVR 495
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE ++S VS LALHN + EL+KLL+LKEE GELS++D K++ L + E
Sbjct: 496 LTAKSREDVESSVSNLALHNLVARA-AKGELRKLLKLKEEVGELSASDTKKFVKLLRKTE 554
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
++ ADV+CCTCVGAGD R L KF ++LIDES QA+EPEC++P+I GAKQ+ILVGDH
Sbjct: 555 SEIMKKADVVCCTCVGAGDKR-LDTKFRTVLIDESTQASEPECLIPIIKGAKQVILVGDH 613
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KA AGL QSLFERL+ LG P RLEVQYRM+P LS+FPSN FYEGSLQN
Sbjct: 614 QQLGPVILERKAGDAGLKQSLFERLISLGHIPIRLEVQYRMNPYLSEFPSNMFYEGSLQN 673
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV ++R +S FPWP+ + PM+F+ G+EEI+ +GTSY+NR EA N E+I T+ +
Sbjct: 674 GVTIEQRTVSASSFPWPIHEIPMMFWANFGREEISANGTSYLNRIEAMNCERIITKLFKD 733
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+KPEQIGVITPYEGQRA+++Q+MQ GSL ++Y +EVASVDAFQGREKD II+SCVR
Sbjct: 734 GVKPEQIGVITPYEGQRAYILQYMQMNGSLDKELYINVEVASVDAFQGREKDYIILSCVR 793
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
+N+ Q IGFL+DPRRLNV LTRAKYG++++GNP+ LS+ LWN+LL ++E+ LVEG L
Sbjct: 794 ANEQQAIGFLSDPRRLNVGLTRAKYGLVILGNPRSLSRNSLWNHLLIHFREKGCLVEGSL 853
Query: 938 NNLKESLILFSKPKQYFKKNN 958
+NL+ L + Y KK N
Sbjct: 854 DNLQ--LCTVELTRSYQKKRN 872
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/906 (52%), Positives = 618/906 (68%), Gaps = 86/906 (9%)
Query: 66 DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCN 125
D++NL S++L +L ++E P ACKYCGI DP+ V+ C KWFCN
Sbjct: 23 DDANLEAASEQLGDLGLDDEP----------APAWACKYCGIRDPSAVVRCVESDKWFCN 72
Query: 126 GRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVV 185
G TSGSHI+ HLVRAKH +V LHKD PLGETVLECY CG RN+F++GF+PAK +SVVV
Sbjct: 73 STGGTSGSHIVQHLVRAKHNQVCLHKDSPLGETVLECYNCGCRNVFLIGFVPAKTESVVV 132
Query: 186 LLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLE 245
LLCR +LK M+WD ++W PLIADR FL WLV+ P E Q+R R ++A+I +E
Sbjct: 133 LLCRVCVETVPALKSMDWDLDEWLPLIADRRFLPWLVREPEEDAQRRARAPSAARIRAIE 192
Query: 246 EVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQ 305
E+W +A FG L D L E Q
Sbjct: 193 ELWARAPDAD-----------------------------FGDL-----DAPGALPEDDAQ 218
Query: 306 ENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTV 365
+ T DGY YQN+ PLVKLEAD+D+R++E+Q +E+V+V
Sbjct: 219 PVLL-------------------TYQDGYHYQNVLAPLVKLEADHDRRVREAQAREDVSV 259
Query: 366 RWDVGLNKKSIAYFSLAKTDG-------DMRLMQGDELKLRYSYDAS----KTWSGLGHV 414
RWD GL+K+ IA FSLA+ + ++RL GDELK+R + + K W GHV
Sbjct: 260 RWDRGLSKRHIAIFSLARGNSYASYESNELRLAVGDELKIRLNSGGARQHGKPWEASGHV 319
Query: 415 IKIPDNFGDEVGLELKSSAGAPTEAT-TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
+++ D E+ LEL++S APTE T GF VDF+WK TS+DRMQ AL+ AVDD S+S
Sbjct: 320 LRLADG---EIALELRTS-NAPTEVTECGFVVDFVWKGTSYDRMQNALKNLAVDDTSLSG 375
Query: 474 YIYHRLLGHNVDEVLFR----CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPG 529
Y+YHRLLGH+V+ + + + P LPDLN SQ AV+ + +PLSLIQGPPG
Sbjct: 376 YLYHRLLGHDVEPQVLKGGAAASSSRRAGVPGLPDLNHSQAAAVRSVVTQPLSLIQGPPG 435
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSP 589
TGKTVTSA IV+ L KQ VLV APSNIAVDQLTEKIH TGLKVVR+CAKSREAI +
Sbjct: 436 TGKTVTSAAIVWHLAKQGMGQVLVTAPSNIAVDQLTEKIHATGLKVVRLCAKSREAISTS 495
Query: 590 VSFLALHNQIRNMEMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVI 647
V L LH +R+++ +EL+KL++LKE+ GEL+ ADEK++R L+ N E+ LL ADVI
Sbjct: 496 VDHLTLHTMLRDIDTPEIAELRKLMRLKEDQGELAPADEKQFRKLRANTERVLLKAADVI 555
Query: 648 CCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCK 707
C TC AGDPRL +F +LIDE+ QATEPE ++P++LGAKQL+LVGDH QLGPV+MCK
Sbjct: 556 CTTCACAGDPRLGGSRFRQVLIDEATQATEPESLIPIVLGAKQLVLVGDHQQLGPVIMCK 615
Query: 708 KAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL- 766
AA+AGL+QSL+ERLV LGIRP RL+VQYR HP LS+FPS FYEG+LQNGV ER L
Sbjct: 616 GAAKAGLTQSLYERLVALGIRPIRLQVQYRSHPCLSEFPSAMFYEGTLQNGVSEGERDLE 675
Query: 767 SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
+ FPWP P+ PM+FYV G EE++ SGTS++NR+EA+++E++ T +++ G+ P+QIGV
Sbjct: 676 GEPRFPWPNPEAPMMFYVCAGAEEMSASGTSFLNRSEAASIERLVTHYLKLGLDPDQIGV 735
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPYEGQRA++V HM G+L A +Y+ +EVASVD+FQGREKD+II+SCVRSN+HQGIGF
Sbjct: 736 ITPYEGQRAYVVHHMASAGALRADVYERVEVASVDSFQGREKDVIILSCVRSNEHQGIGF 795
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
LNDPRRLNVALTRAKYG++++G +VL++ LW+ LL +K+ + EGPL NLK S +
Sbjct: 796 LNDPRRLNVALTRAKYGLVILGAARVLAQDALWHELLTHFKKLGCVAEGPLGNLKVSSLA 855
Query: 947 FSKPKQ 952
KP++
Sbjct: 856 LPKPRR 861
>gi|151946238|gb|EDN64469.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
YJM789]
Length = 971
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 594/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSASASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|190408311|gb|EDV11576.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 971
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 594/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSPSASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|6323726|ref|NP_013797.1| ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae S288c]
gi|400350|sp|P30771.1|NAM7_YEAST RecName: Full=ATP-dependent helicase NAM7; AltName:
Full=Nonsense-mediated mRNA decay protein 1; AltName:
Full=Nuclear accommodation of mitochondria 7 protein;
AltName: Full=Up-frameshift suppressor 1
gi|4023|emb|CAA44266.1| helicase [Saccharomyces cerevisiae]
gi|173142|gb|AAA35197.1| zinc finger protein [Saccharomyces cerevisiae]
gi|807962|emb|CAA89226.1| Nam7p [Saccharomyces cerevisiae]
gi|207342353|gb|EDZ70140.1| YMR080Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148654|emb|CAY81899.1| Nam7p [Saccharomyces cerevisiae EC1118]
gi|285814083|tpg|DAA09978.1| TPA: ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae
S288c]
gi|323353063|gb|EGA85363.1| Nam7p [Saccharomyces cerevisiae VL3]
gi|392297240|gb|EIW08340.1| Nam7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 971
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 594/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSPSASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|256273504|gb|EEU08438.1| Nam7p [Saccharomyces cerevisiae JAY291]
Length = 971
Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 594/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSPSASNNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|323307726|gb|EGA60989.1| Nam7p [Saccharomyces cerevisiae FostersO]
Length = 971
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/872 (51%), Positives = 593/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQXTETGFRSASASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVC PSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCXPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|367008616|ref|XP_003678809.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
gi|359746466|emb|CCE89598.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
Length = 908
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/861 (52%), Positives = 591/861 (68%), Gaps = 64/861 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGI P VI CN C +WFCN + T+ SHI+NHLV + H V+LH D LG+TV
Sbjct: 25 HACAYCGIDSPVSVIRCNGCSRWFCNSKHGTASSHIVNHLVLSHHNVVSLHPDSDLGDTV 84
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ A+ ++VVVLLCR PCA QN K+ NWD +QW+PLI DR FL+
Sbjct: 85 LECYNCGCKNVFLLGFVSARGEAVVVLLCRVPCA-QN--KNANWDTDQWQPLIEDRQFLN 141
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ + PTE+++ R +T +Q++KLE WK N +AT D++ P E+ VLL+
Sbjct: 142 WVAEEPTEEQKLSARLITPSQMSKLEAKWKSNKDATINDIDAPEEQEEIPPVLLK----- 196
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
YQ D Y+YQ
Sbjct: 197 -YQ-------------------------------------------------DAYEYQRS 206
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-DMRLMQGDELKL 398
+GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L+ + ++++ GDE+ L
Sbjct: 207 YGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLASFALSTFESNELKVAVGDEMVL 266
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRM 457
RYS W G G+++++P++ DE LELK S PT TGF+ +FIWK TS+DRM
Sbjct: 267 RYSGLQHPEWEGRGYIVRLPNSMQDEFTLELKPSKQPPPTHLGTGFTAEFIWKGTSYDRM 326
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q AL+KFA+D +S+S ++Y+++LGH + ++ F +LPK FS + LN SQ +AV+H +
Sbjct: 327 QDALKKFALDKKSISGFLYYKILGHQIVDIQFEVNLPKEFSIKHFAQLNASQSHAVEHVL 386
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+AVD L K+ GLKVVR
Sbjct: 387 QRPLSLIQGPPGTGKTVTSATIVYHLSKMHNERILVCAPSNVAVDHLAAKLRDLGLKVVR 446
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE ++S VS LALHN + ELKKLL+LKEE GELS D K++ L + E
Sbjct: 447 LTAKSREDVESSVSNLALHNLVARSS-KGELKKLLRLKEEVGELSIGDTKKFVKLVRKTE 505
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+L ADV+CCTCVGAGD RL +F ++LIDES QA+EPEC++P++ GAKQ+ILVGDH
Sbjct: 506 SEILKKADVVCCTCVGAGDKRL-DTRFRTVLIDESTQASEPECLIPIVKGAKQIILVGDH 564
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KA AGL QSLFERL+ LG P RLEVQYRM+P LS FPSN FYEGSLQN
Sbjct: 565 QQLGPVILERKAGDAGLKQSLFERLIALGHVPLRLEVQYRMNPYLSDFPSNVFYEGSLQN 624
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV ++R ++ FPWP+ PM+F+ G+EEI+ +GTSY+NR EA N E+I TR +
Sbjct: 625 GVTIEQRTVTNSTFPWPIHGVPMMFWANYGREEISANGTSYLNRIEAMNCERIITRLFKD 684
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+KPEQIGVITPYEGQRAF++Q+MQ GSL +Y +EVASVDAFQGREKD II+SCVR
Sbjct: 685 GVKPEQIGVITPYEGQRAFILQYMQMNGSLDRDLYLSVEVASVDAFQGREKDYIILSCVR 744
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
+N+ Q IGFL+DPRRLNV LTRAKYG++++GNP+ LS LWNNLL ++E+ LVEG L
Sbjct: 745 ANEQQIIGFLSDPRRLNVGLTRAKYGLVILGNPRALSTNALWNNLLIHFREKGCLVEGSL 804
Query: 938 NNLKESLILFSKPKQYFKKNN 958
NNL+ + ++ + KNN
Sbjct: 805 NNLQLCTVQLTRNRP--NKNN 823
>gi|323332050|gb|EGA73461.1| Nam7p [Saccharomyces cerevisiae AWRI796]
Length = 930
Score = 923 bits (2386), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 594/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSPSASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|323336281|gb|EGA77552.1| Nam7p [Saccharomyces cerevisiae Vin13]
Length = 930
Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/872 (51%), Positives = 594/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSPSASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|349580361|dbj|GAA25521.1| K7_Nam7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 971
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/872 (51%), Positives = 594/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSASASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + P+E+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPSEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|365759093|gb|EHN00906.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1033
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/881 (51%), Positives = 596/881 (67%), Gaps = 73/881 (8%)
Query: 84 EEEDDGNEFFNKE------LPP-----HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
E++D N+ F + PP ++C YCGI VI CN CKKWFCN + TS
Sbjct: 95 EDDDVDNQLFEETQVAETGFPPASASGNSCAYCGIDSTKCVIKCNSCKKWFCNTKNGTSS 154
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHIINHLV + H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PC
Sbjct: 155 SHIINHLVLSHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPC 214
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A K+ NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N
Sbjct: 215 A---QTKNANWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNK 271
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
+AT D++ P E +LLR YQ
Sbjct: 272 DATINDIDAPEEQEAIPPLLLR------YQ------------------------------ 295
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN
Sbjct: 296 -------------------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALN 336
Query: 373 KKSIAYFSLAKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK- 430
+ +A F+L+ + ++++ GDE+ L YS W G G+++++P++F D LELK
Sbjct: 337 NRHLASFTLSTFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKP 396
Query: 431 SSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
S PT TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F
Sbjct: 397 SKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFD 456
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
LPK FS PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K
Sbjct: 457 VPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDR 516
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKK 610
+LVCAPSN+AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK
Sbjct: 517 ILVCAPSNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKN 575
Query: 611 LLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
LL+LK+E GELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LID
Sbjct: 576 LLKLKDEVGELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLID 634
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF 730
ES QA+EPEC++P++ GAKQ ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P
Sbjct: 635 ESTQASEPECLIPIVKGAKQAILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPI 694
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE 790
RLEVQYRM+P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EE
Sbjct: 695 RLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREE 754
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
I+ +GTS++NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL
Sbjct: 755 ISANGTSFLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKD 814
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
+Y +EVASVDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP
Sbjct: 815 LYINVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNP 874
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
+ L++ LWN+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 875 RSLARNTLWNHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 915
>gi|323347166|gb|EGA81441.1| Nam7p [Saccharomyces cerevisiae Lalvin QA23]
Length = 971
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/872 (51%), Positives = 593/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSPSASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+ PE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASXPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/850 (53%), Positives = 577/850 (67%), Gaps = 62/850 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCG+H P VI CN C KWFCN + +++ SHI+ HLV ++H +V+LH++ LGET
Sbjct: 87 HACAYCGVHTPNSVIKCNTCNKWFCNSKANSTSSHIVTHLVMSRHNQVSLHEESDLGETT 146
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD W+ LI DR FLS
Sbjct: 147 LECYNCGNKNVFMLGFVSAKQESVVVILCRLPCARS---KDINWDTSHWQALIEDRQFLS 203
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV-DEDPHQVLLRYEDG 278
WL P E VT QI KLE W+ N AT D+E +E+ +L+RY DG
Sbjct: 204 WLAPPPAEDALINSVMVTPQQITKLEAQWRLNRNATINDIENTDKQEEEVLPILMRYTDG 263
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
+QYQ FGPLVKLEADYDK LKESQ E++ V+W +GLN + +A F+L+
Sbjct: 264 FQYQRSFGPLVKLEADYDKNLKESQALEHIQVKWALGLNNRHLASFTLS----------- 312
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
T E ++ VG DE+ L
Sbjct: 313 --------------------TFETTDLKVAVG-----------------------DEIIL 329
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGA-PTEATTGFSVDFIWKSTSFDRM 457
RYS W G G ++++P+++ +E LEL S A PT TT F+ +F+WK TS+DRM
Sbjct: 330 RYSGSQGDAWQGQGFILRLPNSYQEEFTLELNPSKVAPPTHLTTDFTAEFVWKGTSYDRM 389
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q A++ FA +D SVS++IYH+LLGH+V V F LPK FS P L +LN SQ AV+ +
Sbjct: 390 QQAMKDFATNDDSVSSFIYHKLLGHDVAPVEFDIELPKRFSHPKLTELNVSQANAVRSVL 449
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATIVY L + +LVCAPSN+AVD L K+ GL VVR
Sbjct: 450 QRPLSLIQGPPGTGKTVTSATIVYHLSRLNKEKILVCAPSNVAVDHLAAKLDSLGLNVVR 509
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE ++S VS LALHN I N ELKKL++LK E GELS+ D K+Y +++E
Sbjct: 510 LTAKSREDVESSVSHLALHN-IVNKTAKGELKKLIKLKNEVGELSAEDSKKYIKHLRSSE 568
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+L+ DV+CCTCVGA D RL + KF ++L+DES QA+EPE ++P++ GAKQ+ILVGDH
Sbjct: 569 LKILNKCDVVCCTCVGAADKRLSQFKFRTVLVDESTQASEPEVLIPIVKGAKQVILVGDH 628
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN FYEGSLQ+
Sbjct: 629 QQLGPVILDRKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQD 688
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV +R ++ FPWPV D PM+F+ G+EE++ SG SY+NR EA NVE+I TR +
Sbjct: 689 GVTNADRVVADSSFPWPVIDTPMMFWANYGREELSSSGNSYLNRVEAMNVERIITRLFKD 748
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGREKDLIIMSC 875
G+KPEQIGVITPYEGQRA+LVQ M +L K Y E+E+ SVDAFQGREKD II+SC
Sbjct: 749 GIKPEQIGVITPYEGQRAYLVQFMSMNSTLLNKRDEYLEVEITSVDAFQGREKDFIILSC 808
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VR+ND Q IGFL+DPRRLNVALTRAKYG++V+GNP+ LS+ LWN+LL ++E+ LV+G
Sbjct: 809 VRANDTQSIGFLSDPRRLNVALTRAKYGLLVLGNPRALSRNRLWNHLLVHFREKGCLVDG 868
Query: 936 PLNNLKESLI 945
PL+NL+ S++
Sbjct: 869 PLDNLQLSMV 878
>gi|365763806|gb|EHN05332.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 971
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/872 (51%), Positives = 593/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHI+NHLV
Sbjct: 42 FEEAQVTETGFRSPSASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PN LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 PNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+ PE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASGPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFE+L+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFEKLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|401624314|gb|EJS42376.1| nam7p [Saccharomyces arboricola H-6]
Length = 971
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/872 (51%), Positives = 593/872 (68%), Gaps = 62/872 (7%)
Query: 82 FEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
FEE + F + ++C YCGI VI CN CKKWFCN + TS SHIINHLV
Sbjct: 42 FEEAQVTETGFPSASASDNSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIINHLVL 101
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH D LG+TVLECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+
Sbjct: 102 SHHNVVSLHPDSDLGDTVLECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNA 158
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
NWD +QW+PLI DR LSW+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++
Sbjct: 159 NWDTDQWQPLIEDRQLLSWVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDA 218
Query: 262 PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
P E +LLR YQ
Sbjct: 219 PEEQEAIPPLLLR------YQ--------------------------------------- 233
Query: 322 AYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 381
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L
Sbjct: 234 ----------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTL 283
Query: 382 AKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEA 439
+ + ++++ GDE+ L YS W G G+++++P++F D LELK S PT
Sbjct: 284 STFESNELKVAIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHL 343
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
TTGF+ +FIWK TS+DRMQ AL+KFA+D +S+S ++Y+++LGH V ++ F LPK FS
Sbjct: 344 TTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGFLYYKILGHQVVDISFDVPLPKEFSI 403
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
N LN SQ AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+
Sbjct: 404 SNFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHRDRILVCAPSNV 463
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L K+ GLKVVR+ AKSRE ++S VS LALHN + ELK LL+LK+E G
Sbjct: 464 AVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVG 522
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS++D KR+ L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPE
Sbjct: 523 ELSASDTKRFVKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPE 581
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
C++P++ GAKQ+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+
Sbjct: 582 CLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMN 641
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++
Sbjct: 642 PYLSEFPSNMFYEGSLQNGVTIEQRTIPNSKFPWPIRGIPMMFWANYGREEISANGTSFL 701
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
NR EA N E+I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVAS
Sbjct: 702 NRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVAS 761
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LW
Sbjct: 762 VDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLW 821
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
N+LL ++E+ LVEG L+NL+ + +P+
Sbjct: 822 NHLLIHFREKGCLVEGTLDNLQLCTVQLVRPQ 853
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/906 (50%), Positives = 605/906 (66%), Gaps = 71/906 (7%)
Query: 48 ASQLDSVNQIQ----VNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACK 103
S+ D++NQ +N Q+ ++ + + Q +H + ++D + + HAC
Sbjct: 40 GSETDTINQYNEQELLNQLQDEQYTSDHPIEQAVHSYATHDTDEDSEQHYE-----HACA 94
Query: 104 YCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY 163
YCGIH+P VI CN C KWFCN + ++S SHI+ HL+ ++H +V+LH++ LG+T LECY
Sbjct: 95 YCGIHNPNSVIKCNTCNKWFCNAKTNSSSSHIVTHLIMSRHNQVSLHEESELGDTTLECY 154
Query: 164 TCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVK 223
CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD +W+ LI DR FLSWL
Sbjct: 155 NCGNKNVFILGFVSAKQESVVVILCRLPCARS---KDVNWDTSEWQALIEDRQFLSWLAP 211
Query: 224 VPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQN 283
PTE + R +T QI+KLE W+ N AT
Sbjct: 212 PPTEDDLIEARLITPQQISKLEAQWRLNRAATIN-------------------------- 245
Query: 284 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPL 343
D D + Q + +R++ D +QYQ FGPL
Sbjct: 246 ----------DIDNNKEAEQEVLPILMRYN------------------DAFQYQRSFGPL 277
Query: 344 VKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSY 402
VKLE DYDK LKESQ E++ V+W +GLN + +A F+L+ + D+++ GDE+ LRYS
Sbjct: 278 VKLEGDYDKNLKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKVAVGDEIILRYSG 337
Query: 403 DASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQLAL 461
+ + W G G+++++P+ + +E LEL S PT+ TT F+ +F+WK TS+DRMQ A+
Sbjct: 338 NQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAEFVWKGTSYDRMQQAM 397
Query: 462 RKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPL 521
+ FA D++SVS++IYH+LLGH V + F LPK FS P L +LN SQ AV+ +QRPL
Sbjct: 398 KDFATDEESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVLQRPL 457
Query: 522 SLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAK 581
SLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L K+ GL VVR+ AK
Sbjct: 458 SLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLNVVRLTAK 517
Query: 582 SREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
SRE ++S VS LALHN + N ELKKL++LK + GELS AD Y L +++E +L
Sbjct: 518 SREDVESSVSHLALHNLV-NSNAKGELKKLIKLKNQVGELSVADTNNYLKLSRSSEMKVL 576
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLG 701
+ A+V+CCTCVGA D RL + +F ++LIDES QA+EPE ++P++ GAKQ+ILVGDH QLG
Sbjct: 577 NKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLG 636
Query: 702 PVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
PV++ KKAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN FYEGSLQNGV +
Sbjct: 637 PVILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTS 696
Query: 762 DERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKP 821
D+R + + FPWPV D PM+F+ G+EE++ SG SY+NR EA NVEKI T+ + G+KP
Sbjct: 697 DDRLIEESTFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKP 756
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGREKDLIIMSCVRSN 879
EQIGVITPYEGQRA+LVQ M +L K Y +E+ SVDAFQGREKD II+SCVR+N
Sbjct: 757 EQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRAN 816
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN 939
D Q IGFL+DPRRLNVALTRAKYG++++GNP+ L + LWN+LL ++E+ LV+GPL+N
Sbjct: 817 DSQSIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDN 876
Query: 940 LKESLI 945
L+ S++
Sbjct: 877 LQLSMV 882
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/906 (50%), Positives = 604/906 (66%), Gaps = 71/906 (7%)
Query: 48 ASQLDSVNQIQ----VNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACK 103
S+ D++NQ +N Q+ ++ + + Q +H ++D + + HAC
Sbjct: 40 GSETDTINQYNEQELLNQLQDEQYTSDHPIEQAVHSYATHNTDEDSEQHYE-----HACA 94
Query: 104 YCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY 163
YCGIH+P VI CN C KWFCN + ++S SHI+ HL+ ++H +V+LH++ LG+T LECY
Sbjct: 95 YCGIHNPNSVIKCNTCNKWFCNAKTNSSSSHIVTHLIMSRHNQVSLHEESELGDTTLECY 154
Query: 164 TCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVK 223
CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD +W+ LI DR FLSWL
Sbjct: 155 NCGNKNVFILGFVSAKQESVVVILCRLPCARS---KDVNWDTSEWQALIEDRQFLSWLAP 211
Query: 224 VPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQN 283
PTE + R +T QI+KLE W+ N AT
Sbjct: 212 PPTEDDLIEARLITPQQISKLEAQWRLNRAATIN-------------------------- 245
Query: 284 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPL 343
D D + Q + +R++ D +QYQ FGPL
Sbjct: 246 ----------DIDNNKEAEQEVLPILMRYN------------------DAFQYQRSFGPL 277
Query: 344 VKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSY 402
VKLE DYDK LKESQ E++ V+W +GLN + +A F+L+ + D+++ GDE+ LRYS
Sbjct: 278 VKLEGDYDKNLKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKVAVGDEIILRYSG 337
Query: 403 DASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQLAL 461
+ + W G G+++++P+ + +E LEL S PT+ TT F+ +F+WK TS+DRMQ A+
Sbjct: 338 NQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAEFVWKGTSYDRMQQAM 397
Query: 462 RKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPL 521
+ FA D++SVS++IYH+LLGH V + F LPK FS P L +LN SQ AV+ +QRPL
Sbjct: 398 KDFATDEESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVLQRPL 457
Query: 522 SLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAK 581
SLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L K+ GL VVR+ AK
Sbjct: 458 SLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLNVVRLTAK 517
Query: 582 SREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
SRE ++S VS LALHN + N ELKKL++LK + GELS AD Y L +++E +L
Sbjct: 518 SREDVESSVSHLALHNLV-NSNAKGELKKLIKLKNQVGELSVADTNNYLKLSRSSEMKVL 576
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLG 701
+ A+V+CCTCVGA D RL + +F ++LIDES QA+EPE ++P++ GAKQ+ILVGDH QLG
Sbjct: 577 NKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQQLG 636
Query: 702 PVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
PV++ KKAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN FYEGSLQNGV +
Sbjct: 637 PVILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQNGVTS 696
Query: 762 DERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKP 821
D+R + + FPWPV D PM+F+ G+EE++ SG SY+NR EA NVEKI T+ + G+KP
Sbjct: 697 DDRLIEESTFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKDGIKP 756
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGREKDLIIMSCVRSN 879
EQIGVITPYEGQRA+LVQ M +L K Y +E+ SVDAFQGREKD II+SCVR+N
Sbjct: 757 EQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSCVRAN 816
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN 939
D Q IGFL+DPRRLNVALTRAKYG++++GNP+ L + LWN+LL ++E+ LV+GPL+N
Sbjct: 817 DSQSIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCLVDGPLDN 876
Query: 940 LKESLI 945
L+ S++
Sbjct: 877 LQLSMV 882
>gi|327200469|pdb|2XZL|A Chain A, Upf1-Rna Complex
Length = 802
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/844 (53%), Positives = 584/844 (69%), Gaps = 62/844 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
++C YCGI VI CN CKKWFCN + TS SHI+NHLV + H V+LH D LG+TV
Sbjct: 12 NSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVLSHHNVVSLHPDSDLGDTV 71
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+ NWD +QW+PLI DR LS
Sbjct: 72 LECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNANWDTDQWQPLIEDRQLLS 128
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++ P E +LLR
Sbjct: 129 WVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEAIPPLLLR----- 183
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
YQ D Y+YQ
Sbjct: 184 -YQ-------------------------------------------------DAYEYQRS 193
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-DMRLMQGDELKL 398
+GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L+ + ++++ GDE+ L
Sbjct: 194 YGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMIL 253
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRM 457
YS W G G+++++P++F D LELK S PT TTGF+ +FIWK TS+DRM
Sbjct: 254 WYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRM 313
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS PN LN SQ AV H +
Sbjct: 314 QDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQSNAVSHVL 373
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+AVD L K+ GLKVVR
Sbjct: 374 QRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDLGLKVVR 433
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE ++S VS LALHN + ELK LL+LK+E GELS++D KR+ L + E
Sbjct: 434 LTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVGELSASDTKRFVKLVRKTE 492
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPEC++P++ GAKQ+ILVGDH
Sbjct: 493 AEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDH 551
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+P LS+FPSN FYEGSLQN
Sbjct: 552 QQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQN 611
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV ++R + FPWP+ PM+F+ G+EEI+ +GTS++NR EA N E+I T+ R
Sbjct: 612 GVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCERIITKLFRD 671
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVASVDAFQGREKD II+SCVR
Sbjct: 672 GVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCVR 731
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LWN+LL ++E+ LVEG L
Sbjct: 732 ANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREKGCLVEGTL 791
Query: 938 NNLK 941
+NL+
Sbjct: 792 DNLQ 795
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/850 (52%), Positives = 585/850 (68%), Gaps = 62/850 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGIH+P VI CN C KWFCN + ++S SHI+ HL+ ++H +V+LH++ LG+T
Sbjct: 93 HACAYCGIHNPNSVIKCNTCNKWFCNAKTNSSSSHIVTHLIMSRHNQVSLHEESELGDTT 152
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD +W+ LI DR FLS
Sbjct: 153 LECYNCGNKNVFILGFVSAKQESVVVILCRLPCARS---KDVNWDTSEWQALIEDRQFLS 209
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
WL PTE + + +T QI+KLE W+ N AT D+E DE +VL
Sbjct: 210 WLAPPPTEDDLIEAKLITPQQISKLEAQWRLNRAATINDIENN--DETEQEVL------- 260
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
P++ +R++ D +QYQ
Sbjct: 261 -------PIL--------------------MRYN------------------DAFQYQRS 275
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKL 398
FGPLVKLE DYDK LKESQ E++ V+W +GLN + +A F+L+ + D+++ GDE+ L
Sbjct: 276 FGPLVKLEGDYDKNLKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKVAVGDEIIL 335
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRM 457
RYS + + W G G+++++P+ + +E LEL S PT TT F+ +F+WK TS+ RM
Sbjct: 336 RYSGNQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTNLTTDFTAEFVWKGTSYTRM 395
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q A++ FA D++SVS++IYH+LLGH V + F LPK FS P L +LN SQ AV+ +
Sbjct: 396 QQAMKDFATDEESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVL 455
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L K+ GLKVVR
Sbjct: 456 QRPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLDLLGLKVVR 515
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE ++S VS LALHN + N ELKKL++LK + GELS D Y L +++E
Sbjct: 516 LTAKSREDVESSVSHLALHNLVNN-NAKGELKKLIKLKNQVGELSVGDTNNYLKLSRSSE 574
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+L+ ++V+CCTCVGA D RL + KF ++LIDES QA+EPE ++P++ GAKQ+ILVGDH
Sbjct: 575 LKILNKSEVVCCTCVGAADRRLSQFKFKTVLIDESTQASEPEVLIPIVKGAKQVILVGDH 634
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ KKAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN FYEGSLQN
Sbjct: 635 QQLGPVILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQN 694
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV +D+R + + FPWPV D PM+F+ G+EE++ SG SY+NR EA NVEKI T+ +
Sbjct: 695 GVTSDDRLIEESTFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKD 754
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGREKDLIIMSC 875
G+KPEQIGVITPYEGQRA+LVQ M +L K Y +E+ SVDAFQGREKD II+SC
Sbjct: 755 GIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGREKDFIILSC 814
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VR+ND Q IGFL+DPRRLNVALTRAKYG++++GNP+ L + LWN+LL ++E+ LV+G
Sbjct: 815 VRANDSQSIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFREKGCLVDG 874
Query: 936 PLNNLKESLI 945
PL+NL+ S++
Sbjct: 875 PLDNLQLSMV 884
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/850 (53%), Positives = 581/850 (68%), Gaps = 62/850 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCG+H P VI CN C KWFCN + +++ SHI+ HLV ++H +V+LH++ LG+T
Sbjct: 104 HACAYCGVHTPNSVIKCNTCNKWFCNSKSNSNSSHIVTHLVMSRHNQVSLHEESDLGDTT 163
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD W+ LI DR FLS
Sbjct: 164 LECYNCGNKNVFMLGFVSAKQESVVVILCRLPCARS---KDINWDTSHWQALIEDRQFLS 220
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG-VDEDPHQVLLRYEDG 278
WL PTE +T QI KLE W+ N AT D+E +E+ +L+RY DG
Sbjct: 221 WLAPPPTEDALINSVMITPQQITKLEAQWRLNRNATINDIENTDKKEEEVLPILMRYTDG 280
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
+QYQ FGPLVKLEAD DK LKESQ E++ V+W +GLN + +A F+L+
Sbjct: 281 FQYQQSFGPLVKLEADCDKNLKESQALEHIQVKWALGLNNRHLASFTLS----------- 329
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
T E ++ VG DE+ L
Sbjct: 330 --------------------TFETTDLKVAVG-----------------------DEIIL 346
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGA-PTEATTGFSVDFIWKSTSFDRM 457
RYS W G G+++++P+++ +E LEL S A PT TT F+ +F+WK TS+DRM
Sbjct: 347 RYSGSQGDAWQGQGYILRLPNSYQEEFTLELNPSKIAPPTHLTTDFTAEFVWKGTSYDRM 406
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q A++ FA+DD+SVS++IYH+LLGH+V V F LPK FS P L +LN SQ AV+ +
Sbjct: 407 QQAMKDFAIDDESVSSFIYHKLLGHDVAPVEFDIELPKRFSHPKLTELNISQANAVRSVL 466
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+AVD L K+ GLKVVR
Sbjct: 467 QRPLSLIQGPPGTGKTVTSATIVYHLSKLNKEKILVCAPSNVAVDHLAAKLDLLGLKVVR 526
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE ++S V LALHN I N ELKKL++LK E GELSS D K+Y +++E
Sbjct: 527 LTAKSREDVESSVGHLALHN-IVNKTSKGELKKLIKLKNEVGELSSEDSKKYIKHLRSSE 585
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+L+ DV+CCTCVGA D RL + KF ++L+DES QA+EPE ++P++ GAKQ+ILVGDH
Sbjct: 586 LKILNKCDVVCCTCVGAADKRLSQFKFRTVLVDESTQASEPEVLIPIVKGAKQVILVGDH 645
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN FYEGSLQ+
Sbjct: 646 QQLGPVILDRKAADAGLKQSLFERLVFLGHIPIRLEVQYRMHPCLSEFPSNMFYEGSLQD 705
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV +R ++ FPWPV D PM+F+ G+EE++ SG SY+NR EA NVE+I TR +
Sbjct: 706 GVTNADRLVADSSFPWPVVDTPMMFWANYGREELSSSGNSYLNRVEAMNVERIITRLFKD 765
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGREKDLIIMSC 875
G+KPEQIGVITPYEGQRA+LVQ M +L +K Y E+E+ SVDAFQGREKD II+SC
Sbjct: 766 GIKPEQIGVITPYEGQRAYLVQFMSMNSTLLSKRDEYLEVEITSVDAFQGREKDFIILSC 825
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VR+ND Q IGFL+DPRRLNVALTRAKYG++V+GNP+ LS+ LWN+LL ++E+ LV+G
Sbjct: 826 VRANDSQSIGFLSDPRRLNVALTRAKYGLLVLGNPRALSRNRLWNHLLVHFREKGCLVDG 885
Query: 936 PLNNLKESLI 945
PL+NL+ S++
Sbjct: 886 PLDNLQLSMV 895
>gi|302306557|ref|NP_982968.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|299788573|gb|AAS50792.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|374106171|gb|AEY95081.1| FABR022Cp [Ashbya gossypii FDAG1]
Length = 999
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/868 (52%), Positives = 593/868 (68%), Gaps = 63/868 (7%)
Query: 85 EEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKH 144
EED GN E HAC YC I P+ V+ CN C KWFCN + TS SHIINHLV + H
Sbjct: 56 EEDLGNLVSVAE---HACSYCSIDSPSCVVKCNACNKWFCNSKNGTSSSHIINHLVFSHH 112
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
V+LH + LG+TVLECY CG RN+F+LGF+ AK+++VVV+LCR PCA +++NWD
Sbjct: 113 NVVSLHPESDLGDTVLECYNCGCRNVFLLGFVSAKSEAVVVILCRLPCA---QTRNVNWD 169
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
+QW+ LI +R LSW+ + P+E++Q + +T +QI+KLE W+ N +AT D++ P
Sbjct: 170 TDQWQSLIENRQLLSWVAEEPSEEDQLKACLITPSQISKLEMKWRSNKDATINDIDLPEE 229
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
E+ VL+RY D YQYQ FGPLVKLEADYDK+LKESQ E+++V W +GLN + +A F
Sbjct: 230 QEELPPVLMRYTDAYQYQRSFGPLVKLEADYDKQLKESQALEHISVTWTLGLNNRHLASF 289
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
+L+ T E+ ++ VG
Sbjct: 290 ALS-------------------------------TFESNELKVAVG-------------- 304
Query: 385 DGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGF 443
DE+ LRYS W G G+++++P++F DE LELK S A PT TTGF
Sbjct: 305 ---------DEMILRYSGLQQAEWEGRGYILRLPNSFQDEFTLELKPSKAPPPTNLTTGF 355
Query: 444 SVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 503
+ +F+WK TS+ RMQ AL+KFAVD +S+S Y+Y+++LGH+V ++ F LPK FS PN
Sbjct: 356 TAEFVWKGTSYQRMQEALKKFAVDKKSISGYLYYKILGHDVPDIEFEVDLPKDFSIPNFT 415
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQV AV H +QRPLSLIQGPPGTGKTVTSATIVY L K VLVCAPSN+AVD
Sbjct: 416 KLNTSQVNAVAHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKMHKERVLVCAPSNVAVDH 475
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L K+ GLKVVR+ AKSRE ++S VS LALHN + ELKKLL+LK+E GELS
Sbjct: 476 LAAKLRDMGLKVVRLTAKSREDVESSVSDLALHNLVAR-SSRGELKKLLKLKDEVGELSV 534
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
D + + L + E ++L ADV+CCTCVGAGD R L KF ++LIDES QA+EPEC++P
Sbjct: 535 KDTRSFVKLVRKTESTILKKADVVCCTCVGAGDKR-LDSKFRTVLIDESTQASEPECLIP 593
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+I GAKQ++LVGDH QLGPV++ + A AGL QSLFERL+ LG P RLEVQYRM+P LS
Sbjct: 594 IIKGAKQVVLVGDHQQLGPVILDRNAGDAGLKQSLFERLISLGHVPIRLEVQYRMNPYLS 653
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
+FPSN FYEG+LQNGV ++R + FPWP+ D PM+F+ G+EEI+ +GTSY+NR E
Sbjct: 654 EFPSNMFYEGTLQNGVTVEQRTVVDSSFPWPICDIPMMFWANYGREEISANGTSYLNRIE 713
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A N E+I TR + G+KPEQIGV+TPYEGQRA+++Q+MQ GS+ +Y +EVASVDAF
Sbjct: 714 AINCERIITRLFKDGVKPEQIGVVTPYEGQRAYIIQYMQMNGSMDKDLYMTVEVASVDAF 773
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD II+SCVR+ND Q IGFL DPRRLNVALTRAKYG+ ++GNP L + +WN+LL
Sbjct: 774 QGREKDYIILSCVRANDQQSIGFLTDPRRLNVALTRAKYGLAILGNPASLCRNSIWNHLL 833
Query: 924 NFYKEQKVLVEGPLNNLKESLILFSKPK 951
++E+ LVEG ++NL+ + ++ K
Sbjct: 834 IHFREKGCLVEGTMDNLQLCTMQLTRSK 861
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/850 (52%), Positives = 576/850 (67%), Gaps = 61/850 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGIH P+ V+ CN C KWFCN + +S SHII HLV ++H +V+LH+D LG+T
Sbjct: 90 HACSYCGIHTPSSVVKCNTCNKWFCNAKTDSSSSHIITHLVMSRHNQVSLHEDSDLGDTT 149
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK +SVVV+LCR PCA NS KD+NWD W+ LI +R FLS
Sbjct: 150 LECYNCGNKNVFMLGFVSAKQESVVVILCRLPCA--NS-KDINWDTSHWQALIEERQFLS 206
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
WL P E+ + +T QI+KLE W+ N +AT D+E D
Sbjct: 207 WLAPPPPEEALVNAKLITPQQISKLEAQWRLNRDATINDIENT--------------DKQ 252
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
Q + + L++ D +QYQ
Sbjct: 253 QEEEVLPILMRY---------------------------------------NDAFQYQRS 273
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK-TDGDMRLMQGDELKL 398
FGPLVKLEADYDK +KESQ E++ V+W +GLN + +A F+L+ + D+++ GDE+ L
Sbjct: 274 FGPLVKLEADYDKNIKESQALEHIQVKWALGLNNRHLASFTLSTYENSDLKVAVGDEIIL 333
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRM 457
RYS + W G G+++++P+ +E LEL S PT+ TT F+ +F+WK TS+DRM
Sbjct: 334 RYSGFQREPWEGNGYILRLPNKNQEEFTLELNPSKVTPPTDLTTDFTAEFVWKGTSYDRM 393
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q A++ FA D+ SVS+YIYH+LLGH V + F LP+ FS P L +LN SQ AV+ +
Sbjct: 394 QQAMKDFATDETSVSSYIYHKLLGHEVVPIEFDTELPQRFSHPALTELNVSQTNAVRTVL 453
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L EK+ GLKVVR
Sbjct: 454 QRPLSLIQGPPGTGKTVTSATIIYHLSKLNKEKILVCAPSNVAVDHLAEKLDLLGLKVVR 513
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE +DS VS LALHN + N E KKL++LK E GELS D + Y +N+E
Sbjct: 514 LTAKSREDVDSSVSHLALHNLV-NKGAKGEFKKLIKLKNEVGELSVEDSRIYFRNLRNSE 572
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
LLD D++CCTCVGA D RL + KF ++LIDES QA+EPE ++P++ GAKQ+ILVGDH
Sbjct: 573 SKLLDKCDIVCCTCVGAADKRLSQFKFRTVLIDESTQASEPEVLIPIVKGAKQVILVGDH 632
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KAA AGL QSLFERLV LG P RLEVQYRMHP LS FPSN FYEGSLQN
Sbjct: 633 QQLGPVILDRKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSDFPSNMFYEGSLQN 692
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV +D+R + FPWP+ D PM+F+ G+EE++ SG S++NR EA NVEKI TR +
Sbjct: 693 GVTSDDRLIEDATFPWPMVDTPMMFWANYGREELSSSGNSFLNRVEAMNVEKIITRLFKD 752
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGREKDLIIMSC 875
G+ P+QIGVITPYEGQRA+LVQ M +L K Y ++E+ SVDAFQGREKD II+SC
Sbjct: 753 GVTPDQIGVITPYEGQRAYLVQFMSMNSTLLDKRDQYLDVEITSVDAFQGREKDFIILSC 812
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VR+ND Q IGFL+DPRRLNVALTRAKYG+IV+GNP+ L + LWN LL ++E+ LV+G
Sbjct: 813 VRANDAQSIGFLSDPRRLNVALTRAKYGLIVLGNPRALCRNRLWNCLLVHFREKGCLVDG 872
Query: 936 PLNNLKESLI 945
PL+NL+ S++
Sbjct: 873 PLDNLQLSMV 882
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/895 (50%), Positives = 606/895 (67%), Gaps = 75/895 (8%)
Query: 74 SQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCN--ICKKWFCNGRGHTS 131
S + +L FE+ ED + +LPPHAC+YCG+HDP V+ C+ C KWFCNGRG TS
Sbjct: 162 SVPMSQLTFEDPED--LDTIQVDLPPHACRYCGLHDPLTVVRCSNSSCGKWFCNGRGKTS 219
Query: 132 GSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTP 191
+HI+NHLV+AKH E++LH D P G+ VLECY CG RNIF+LGFIPAK +SVV+LLCR P
Sbjct: 220 SAHIVNHLVKAKHNEISLHSDSPFGDAVLECYNCGCRNIFLLGFIPAKTESVVILLCRDP 279
Query: 192 CAAQNSLKDMNWDQEQWKPLI--ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWK 249
CA +S + NWD +W PL+ DR FLSWLVKVP+E +Q+R RQ++ QIAKLEE WK
Sbjct: 280 CAMASSKDNPNWDLSKWVPLVNGGDRHFLSWLVKVPSENDQERARQISMIQIAKLEEDWK 339
Query: 250 DNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVT 309
DP+ LL E + L++ E
Sbjct: 340 ----------------VDPNATLLEVEHHGAETTLLPTLLRYE----------------- 366
Query: 310 VRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 369
D YQYQ I PL+K+E+DY+K ++ES TQ++V +RW+
Sbjct: 367 ----------------------DAYQYQEIITPLIKMESDYEKLMRESLTQDDVNIRWEQ 404
Query: 370 GLNK-KSIAYFSLAKTDGDMRLMQGDELKLRYS--YDASKTWSGLGHVIKIPDN--FGDE 424
GL+K K A FS +++D + +++ GDELK+ + D + W G + +I + E
Sbjct: 405 GLSKSKWFAQFSFSRSDFEFKVVVGDELKVSFKGDRDYPEPWESSGRITRIDEESEASME 464
Query: 425 VGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV 484
+ LEL + P ++ + F +D +W+STSFDR+ +AL+ FA+ ++S+Y+YH LLGH
Sbjct: 465 ITLELYNH-NPPNKSKSKFKIDMVWRSTSFDRILIALKAFAIKQDAISSYLYHALLGHQP 523
Query: 485 DEVLFRCHLPK--HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQ 542
D + +P+ +F P LP LN SQ+ A ++ PLSLIQGPPGTGKT+ SA +V+
Sbjct: 524 DATKVKVTVPQPTNFVLPGLPPLNASQISAACSVLKSPLSLIQGPPGTGKTLVSAFLVHH 583
Query: 543 LVK---QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI 599
LV + +LVCAPSN+A+DQL K+H GLKVVR+C+K RE + SPV L LH+Q+
Sbjct: 584 LVNHGIKGKEKLLVCAPSNVAIDQLAGKLHSVGLKVVRLCSKLREEVSSPVENLTLHHQV 643
Query: 600 RNMEMNSE--LKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
++ + L+K L+EETGEL+ DE+++ +LK + E+++L ADVIC TCVGAGDP
Sbjct: 644 AQLDQYGKGVLRKFKALREETGELNPEDERKFLVLKGSLERNILKEADVICTTCVGAGDP 703
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
RL IKF +LIDE+ QA+EPEC++P++LGA+Q++LVGDHCQLGPV++CKK AGLS S
Sbjct: 704 RLRDIKFPYVLIDEATQASEPECLIPLVLGARQVVLVGDHCQLGPVLLCKKVQEAGLSLS 763
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
LFERL+ LG PFRL QYRMHP LS+FPSN FYEG L N + +R ++ F WP P+
Sbjct: 764 LFERLIHLGHHPFRLTTQYRMHPALSEFPSNTFYEGQLVNEISYRDR-VTNNGFVWPHPN 822
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
+PM F+ + G EEI+ SGTS++NRTEA+ EKI TRF+ G KP QIG+ITPYEGQR+FL
Sbjct: 823 RPMFFHNSTGHEEISSSGTSFINRTEATLCEKIVTRFLELGTKPSQIGIITPYEGQRSFL 882
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
V +MQ G LP+ +Y+EIEVASVD+FQGREKD II+SCVRSN++QGIGFL DPRRLNVAL
Sbjct: 883 VNNMQRTGRLPSDLYKEIEVASVDSFQGREKDFIILSCVRSNENQGIGFLQDPRRLNVAL 942
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
TRA+YG+I++GN +VLS+ LWNNL++ +K +VLVEG L NLK+S ++ KP++
Sbjct: 943 TRARYGLIILGNARVLSRDLLWNNLISHFKANEVLVEGGLQNLKQSSVVLQKPRK 997
>gi|156836785|ref|XP_001642437.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112963|gb|EDO14579.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 999
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/860 (52%), Positives = 595/860 (69%), Gaps = 61/860 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
H+C YCGI P VI CN CKKWFCN + + SHI+NHLV + H V+LH D LG+T+
Sbjct: 77 HSCAYCGIDSPTSVIKCNSCKKWFCNSKNGATSSHIVNHLVLSHHNVVSLHPDSDLGDTI 136
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK+++VVVLLCR PCA K++NWD +QW+P+I +R FL
Sbjct: 137 LECYNCGCKNVFLLGFVSAKSEAVVVLLCRVPCA---QTKNVNWDTDQWQPIIDNRQFLP 193
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ + P ++E+ R +T +QI+KLE W+ N +AT D++ P E+ +LLRY+D +
Sbjct: 194 WVAEEPGDEEKLTARLITPSQISKLEAKWRSNKDATINDIDAPETQEEIPPILLRYQDAF 253
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
+YQ FGPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L+
Sbjct: 254 EYQRSFGPLIKLEADYDKQLKESQALEHISVTWSLALNNRHLASFALS------------ 301
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLR 399
T E+ ++ VG DE+ LR
Sbjct: 302 -------------------TFESNELKVAVG-----------------------DEMILR 319
Query: 400 YSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
YS W G G+++++P++F DE LELK S APT+ TGF+ +FIWK TS+DRMQ
Sbjct: 320 YSGLQHPEWEGRGYIVRLPNSFKDEFTLELKPSKIPAPTQLGTGFTAEFIWKGTSYDRMQ 379
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+KFA+D +S+S Y+Y+++LGH V ++ F +P S P+ LN SQ AV H +Q
Sbjct: 380 DALKKFAIDKKSISGYLYYKILGHEVHDIEFDVPIPTELSIPHFARLNASQASAVAHVLQ 439
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
+PLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+AVD L K+ GLKVVR+
Sbjct: 440 KPLSLIQGPPGTGKTVTSATIVYHLSKSHKDRILVCAPSNVAVDHLASKLRDLGLKVVRL 499
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
AKSRE ++S VS LALHN + ELKKLL+LKEE GELS+ D K++ L + AE
Sbjct: 500 TAKSREDVESSVSDLALHNLVAR-SSKGELKKLLKLKEEVGELSATDAKKFVRLVRKAES 558
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
+L ADV+CCTCVGAGD R L KF ++LIDES QA+EPEC++P++ GAKQ+ILVGDH
Sbjct: 559 EILKKADVVCCTCVGAGDKR-LDAKFRTVLIDESTQASEPECLIPIVKGAKQIILVGDHQ 617
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPV++ +KA AGL QSLFERL++LG P RLEVQYRM+P LS+FPSN FYEGSLQNG
Sbjct: 618 QLGPVILERKAGDAGLKQSLFERLILLGHVPIRLEVQYRMNPFLSEFPSNMFYEGSLQNG 677
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V ++R + FPWP+ + PM+F+ G+EEI+ +GTS++NR EA N E+I TR + G
Sbjct: 678 VTIEQRTIPGSTFPWPIHEVPMMFWANYGREEISANGTSFLNRIEAMNCERIITRLFKDG 737
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+KP QIGVITPYEGQRA+++Q+MQ GSL ++Y +EVASVDAFQGREKD II+SCVR+
Sbjct: 738 VKPHQIGVITPYEGQRAYILQYMQMNGSLDKELYVNVEVASVDAFQGREKDYIILSCVRA 797
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N+ Q IGFL+DPRRLNV LTRAKYG++++GNP+ LS+ LWN+LL ++E+ LVEGPLN
Sbjct: 798 NEQQAIGFLSDPRRLNVGLTRAKYGLVILGNPRSLSRNVLWNHLLIHFREKGCLVEGPLN 857
Query: 939 NLKESLILFSKPKQYFKKNN 958
NL+ + ++ K+NN
Sbjct: 858 NLQLCTVQLTRSHPN-KRNN 876
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/862 (52%), Positives = 592/862 (68%), Gaps = 71/862 (8%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGH-TSGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGI + + V C KWFCNGR + S +I HLVR+++KEV LH+ PLG+
Sbjct: 78 HACAYCGISNASCVAQCVKTNKWFCNGRSNGLPASCLIYHLVRSRNKEVRLHESSPLGDM 137
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQN---SLKDMNWDQEQWKPLIADR 215
+LECY G N+F LGFIP K ++VVVL R AAQ+ +LK++N D W+PLI D+
Sbjct: 138 LLECYVTGATNVFNLGFIPCKDENVVVLATRD--AAQSNPAALKELNLDISLWEPLIQDK 195
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRY 275
FL WLV+VP E E R RQV+ A++ KLEE+WK N EAT D+EK +ED V L+Y
Sbjct: 196 VFLPWLVQVPEESEILRARQVSPAKVIKLEELWKTNPEATLDDVEKQEGNEDYQPVALQY 255
Query: 276 EDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQ 335
ED YQYQNIFGPL+KLEADYDK +E+QT++N+T+RWDVGL+K+ IAYF
Sbjct: 256 EDAYQYQNIFGPLIKLEADYDKAQRENQTKDNITIRWDVGLSKRKIAYF----------- 304
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDE 395
FG AD +K + + GD
Sbjct: 305 ---CFG------ADEEK-----------------------------------VSVALGDS 320
Query: 396 LKLRY---SYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKST 452
L+LR + + + W G G VIK +EVG+E+ AP E++TG+SVDF+WK T
Sbjct: 321 LQLRLLMQTPNGPQLWQGQGVVIKFTAQ--EEVGVEM-YGMDAPVESSTGYSVDFLWKGT 377
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPK--HFSAPNLPDLNRSQV 510
S++R Q AL+ FAVD+ S S YIYH+LLGH V++ +PK +AP LP+LN SQ
Sbjct: 378 SYERAQQALKSFAVDETSCSGYIYHKLLGHEVEDQKLHVDVPKGTKLTAPGLPELNDSQF 437
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK ++RPLSL+QGPPGTGKTVTSATIVY L K+ V+VCAPSN+AVD L EKI +
Sbjct: 438 NAVKEVLERPLSLVQGPPGTGKTVTSATIVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEK 497
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNM--EMNSELKKLLQLKEETGELSSADEKR 628
TGLKVVR+ ++SRE + S V L LH Q+ N+ + +KL LK E GELS DEK+
Sbjct: 498 TGLKVVRISSRSREHLVSSVEHLTLHYQVANIGGATHKAFQKLQALKNECGELSPGDEKK 557
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
Y+ +K E+ +L+NADVIC T VGAGDPRL +F +LIDES QATEPEC++P+++GA
Sbjct: 558 YKNAQKKLERDILENADVICTTAVGAGDPRLADFRFRMVLIDESTQATEPECLIPIVMGA 617
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
K +++VGDH QLGPVV CK+A AGL+QSLFERL+ LGI+P RL VQYRMHP LS FPSN
Sbjct: 618 KHVVMVGDHRQLGPVVTCKQAHAAGLAQSLFERLIALGIKPIRLGVQYRMHPCLSDFPSN 677
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FYEG L NGV A +R LS +DFPWPVP KPM+F+ GQEE++ SGTS++NR EA VE
Sbjct: 678 KFYEGVLSNGVSASDRTLSHVDFPWPVPSKPMMFWSQTGQEEMSASGTSFLNRAEAVAVE 737
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
K T + G+ PE IGV+TPYEGQRA++VQHM G L ++Y++I+VASVD+FQG+EK
Sbjct: 738 KCVTHLLNSGVSPEDIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEK 797
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D IIM+CVRSN+ GIGFL+DPRRLNVA+TRA+ G+I+IGNPKVL+KQ L++++L +++
Sbjct: 798 DFIIMTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIIIGNPKVLNKQLLFHDMLTHFRQ 857
Query: 929 QKVLVEGPLNNLKESLILFSKP 950
+K LVEG L +LK+ ++ +P
Sbjct: 858 KKCLVEGALGSLKQCMVALPEP 879
>gi|255732109|ref|XP_002550978.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
gi|240131264|gb|EER30824.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
Length = 993
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/864 (51%), Positives = 583/864 (67%), Gaps = 66/864 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
H+C YCGIH+P VI CN C KWFCN + +S SHI+ HL+ ++H +V+LH++ LG+T
Sbjct: 81 HSCAYCGIHNPCSVIKCNTCNKWFCNAKTSSSSSHIVTHLIMSRHNQVSLHEESDLGDTT 140
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD QW+ LI +R FLS
Sbjct: 141 LECYNCGNKNVFMLGFVSAKQESVVVILCRLPCARS---KDINWDTSQWQALIDNRQFLS 197
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
WL PTE + + +T QI+
Sbjct: 198 WLAPSPTEDDLISAKLITPQQIS------------------------------------- 220
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
KLEA + RL S T ++ +K + D +QYQ
Sbjct: 221 ----------KLEAQW--RLNRSATINDIENN-----DKTEEEVLPILMRYNDAFQYQQS 263
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKL 398
FGPLVKLEADYDK LKESQ E++ V+W +GLN + +A F+L+ + D+++ GDE+ L
Sbjct: 264 FGPLVKLEADYDKNLKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKVAVGDEIIL 323
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAP-TEATTGFSVDFIWKSTSFDRM 457
RYS + W G G+++++P+ + +E LEL +S AP T+ TT F+ +F+WK TS+DRM
Sbjct: 324 RYSGSLREAWEGHGYILRLPNAYQEEFTLELNTSKIAPPTDLTTDFTAEFVWKGTSYDRM 383
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q A++ FA D++SVS+YIYH+LLGH V+ V F LPK FS P L +LN SQ AV+ +
Sbjct: 384 QQAMKDFATDEKSVSSYIYHKLLGHEVEPVEFDIELPKRFSHPKLTELNISQTNAVRSVL 443
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L K+ GLKVVR
Sbjct: 444 QRPLSLIQGPPGTGKTVTSATIIYHLSKLNREKILVCAPSNVAVDHLAAKLDLLGLKVVR 503
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ A+SRE ++S VS LALHN + N ELKKL++LK + GELS D +Y L + +E
Sbjct: 504 LTARSREDVESSVSHLALHNLV-NSHAKGELKKLIKLKNQVGELSVEDTNKYIKLLRTSE 562
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
L+ DV+CCTCVGA D RL + KF S+LIDES QA+EPE ++P++ GAKQ+ILVGDH
Sbjct: 563 MKALNKCDVVCCTCVGAADKRLSQFKFRSVLIDESTQASEPEVLIPIVKGAKQVILVGDH 622
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN FYEGSLQN
Sbjct: 623 QQLGPVILDRKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYEGSLQN 682
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV +D+R + FPWPV D PM+F+ G+EE++ SG SY+NR EA NVEKI T+ +
Sbjct: 683 GVTSDDRLIEDSTFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEKIITKLFKD 742
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGREKDLIIMSC 875
G++PEQIGVITPYEGQRA+LVQ M +L K Y ++E+ SVDAFQGREKD II+SC
Sbjct: 743 GIQPEQIGVITPYEGQRAYLVQFMSMNSTLLDKRDQYLDVEITSVDAFQGREKDYIILSC 802
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VR+ND Q IGFL+DPRRLNVALTR+KYG+I++GNP+ L + LWN+LL ++E+ LV+G
Sbjct: 803 VRANDSQSIGFLSDPRRLNVALTRSKYGLIILGNPRALCRNRLWNHLLIHFREKGCLVDG 862
Query: 936 PLNNLKESLILF----SKPKQYFK 955
PL+NL+ S++ +KP FK
Sbjct: 863 PLDNLQLSMVQLNTNPTKPGGNFK 886
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/868 (51%), Positives = 586/868 (67%), Gaps = 80/868 (9%)
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
PHAC YCGIH V+ CN C KWFCN + GSHI++HL+ ++H+ V+LH++ LG+T
Sbjct: 36 PHACAYCGIHATNCVVKCNTCNKWFCNSKSGDKGSHIVSHLILSRHRIVSLHEESDLGDT 95
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG +N+F+LG++ AK +SVVV+LCR PCA Q KD+NWD QW+PLI +R FL
Sbjct: 96 VLECYNCGNKNVFILGYVSAKQESVVVILCRLPCAQQ---KDINWDTNQWQPLIEERQFL 152
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDP-HQVLLRYED 277
W+ P E +Q +T AQI+KLE W+ N +AT +D+++ G +E+ +L+RY D
Sbjct: 153 PWIAGNPEEHDQIEAIPITHAQISKLEAQWRLNRDATIEDIDQKGEEEEEVLPILMRYND 212
Query: 278 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQ 337
+QYQ FGPL+ LEA+YDK +KESQ E++T+RW +GLNK+ +A F L+
Sbjct: 213 AFQYQRAFGPLLHLEAEYDKGMKESQALEHITIRWAMGLNKRHLASFILS---------- 262
Query: 338 NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELK 397
T E +++ VG DE+
Sbjct: 263 ---------------------TFETSSLKVAVG-----------------------DEII 278
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGA-PTEATTGFSVDFIWKSTSFDR 456
L Y+ + W G G ++++P+ + +E LEL A PT TT F+ +F+WK TS++R
Sbjct: 279 LHYNGGDREPWQGSGFIVRLPNAYHNEFTLELNPQKNAPPTHLTTNFTAEFVWKGTSYNR 338
Query: 457 MQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA 516
MQ AL+ FAVD++SVS YIYHR+LGHNV+ V F +LP+ S PNL LN SQ AV+
Sbjct: 339 MQHALKSFAVDEKSVSGYIYHRILGHNVEPVEFSFNLPEKLSIPNLTALNESQENAVRTV 398
Query: 517 IQRPLSLIQGPPGTGKTVTSATIVYQL-----------------VKQTGSPVLVCAPSNI 559
+QRPLSLIQGPPGTGKT TSATI+Y L KQT +LVCAPSN+
Sbjct: 399 LQRPLSLIQGPPGTGKTFTSATIIYHLRNMINKKPSGKKSSKSKKKQTAEKILVCAPSNV 458
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L EKI G+KV+R+ AKSRE +S VS L+LHN I ++ N L+KL K G
Sbjct: 459 AVDHLAEKIANLGVKVMRLTAKSREDAESSVSHLSLHNLI--VQTNKRLQKLQDKKNAEG 516
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
ELS+ + + L + AEKS++++ +VIC TCVGAGD RL + F ++LIDES QA+EPE
Sbjct: 517 ELSAKEAVEFHKLTRKAEKSVMEDCEVICSTCVGAGDHRLDSMVFRAVLIDESTQASEPE 576
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
M+P++ GAKQ+ILVGDH QLGPV++ KKA AGL QSLFERLVVLG P RLEVQYRMH
Sbjct: 577 IMIPIVKGAKQVILVGDHQQLGPVILHKKAGDAGLKQSLFERLVVLGHVPIRLEVQYRMH 636
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++ R FPWPV D PM+F+ G+EEI+ SG SY+
Sbjct: 637 PCLSEFPSNMFYEGSLQNGVSSESRTFKNETFPWPVLDFPMMFWANYGREEISASGYSYL 696
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEV 857
NR EA NVEKI TR + G+K EQIGV+TPYEGQRA+++QHM GSL K Y E+EV
Sbjct: 697 NRVEAMNVEKIITRLFKQGVKAEQIGVVTPYEGQRAYILQHMSLTGSLVDKREQYSEVEV 756
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
ASVDAFQGREKD II+SCVR+N+ GIGFL+D RRLNVALTRAKYG++++GNP+ LSK
Sbjct: 757 ASVDAFQGREKDYIILSCVRANETHGIGFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNK 816
Query: 918 LWNNLLNFYKEQKVLVEGPLNNLKESLI 945
LWN+LL ++E+ LVEGPL+NL+ S++
Sbjct: 817 LWNHLLIHFREKGCLVEGPLDNLQLSMV 844
>gi|340369264|ref|XP_003383168.1| PREDICTED: regulator of nonsense transcripts 1-like [Amphimedon
queenslandica]
Length = 1081
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/624 (68%), Positives = 515/624 (82%), Gaps = 5/624 (0%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
D YQYQNI GPLVKLEADYDK+LKESQTQ+ + VRWD+GLN+K +AYF+ ++ +GDMRLM
Sbjct: 276 DAYQYQNILGPLVKLEADYDKKLKESQTQDGIIVRWDIGLNQKRLAYFNFSRQNGDMRLM 335
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
QGDEL+LRY + + W+G+GHV K+P +F +EVGLEL+S+ PT T F VDF+WKS
Sbjct: 336 QGDELRLRYVGRSHEPWNGIGHVTKVPSSFAEEVGLELRSNVNVPTSCTRDFCVDFVWKS 395
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE---VLFRCHLPKHFSAPNLPDLNRS 508
TSFDRMQ AL+ AVD+ SVS Y+YHRLLGH V E ++ LPKHFSAPNLP LN S
Sbjct: 396 TSFDRMQNALKLIAVDEGSVSTYLYHRLLGHEVLEEPAIIIHKQLPKHFSAPNLPKLNPS 455
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
Q+YAVK +Q+PL LIQGPPGTGKTVTSATIVY L K VLVCAPSNIAVDQLTEKI
Sbjct: 456 QIYAVKTVLQKPLGLIQGPPGTGKTVTSATIVYHLSKMGMGQVLVCAPSNIAVDQLTEKI 515
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS--ELKKLLQLKEETGELSSADE 626
H+TGLKVVR+CAKSREAIDSPVSFLALHNQ+ + +S ELKKL QLK++ GELSS DE
Sbjct: 516 HKTGLKVVRLCAKSREAIDSPVSFLALHNQVIQLAKDSYPELKKLQQLKDDQGELSSTDE 575
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
KRY LK+ EK LL ADVICCTCV AGDPRL K F +LIDES QATEPECMVP+++
Sbjct: 576 KRYTSLKRQLEKELLLGADVICCTCVSAGDPRLAKFSFKMVLIDESTQATEPECMVPIVM 635
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
G+KQ++LVGDHCQLGPV+MCKKAA A LSQSLFERLV+L I+P RLEVQYRMHP L++FP
Sbjct: 636 GSKQVVLVGDHCQLGPVIMCKKAANARLSQSLFERLVLLNIKPIRLEVQYRMHPALTEFP 695
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN 806
S+ FY+G+LQN V +ER++ +++FPWP DKPM F+ + GQEEI+ SGTSY+NRTEA N
Sbjct: 696 SSVFYDGTLQNAVSPEERRMDEVNFPWPNVDKPMFFWCSFGQEEISSSGTSYLNRTEAVN 755
Query: 807 VEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGR 866
VEK+ T+ ++ G+KP QIGVITPYEGQRA++VQ MQ+ G + +K+Y+++EVASVDAFQGR
Sbjct: 756 VEKVVTKLMKNGVKPVQIGVITPYEGQRAYVVQQMQFNGGMSSKLYEQLEVASVDAFQGR 815
Query: 867 EKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFY 926
EKD II+SCVRSN+HQGIGFLND RRLNVALTRAKYG+I+IGN KVLS+ LW++L+ Y
Sbjct: 816 EKDFIILSCVRSNEHQGIGFLNDARRLNVALTRAKYGVIIIGNAKVLSRNELWHHLIKEY 875
Query: 927 KEQKVLVEGPLNNLKESLILFSKP 950
+EQ +LVEGPLNNL+ + + SKP
Sbjct: 876 QEQGLLVEGPLNNLRRNEMHLSKP 899
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/335 (60%), Positives = 247/335 (73%), Gaps = 7/335 (2%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MS+ G + LTFLD++ G DTQG E+ F +FT SQ+QTQ+SQL N
Sbjct: 1 MSLPEAGYTQGQLTFLDSDP--YYGADTQGMEYGF-EFTQLSQTQTQSSQLTQSNGGGPT 57
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFN---KELPPHACKYCGIHDPAYVIMCN 117
G N + + V L F+EE D E +ELPPHACKYCGIHDPA V+MCN
Sbjct: 58 GTSNATSGSSTAVKSNKDSL-FDEEGDVEFEEEEPHPQELPPHACKYCGIHDPAAVVMCN 116
Query: 118 ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIP 177
KKWFCNGRG+TSGSHI+NHLVRA + EVTLHK+GPLGETVLECY CG +N+F LGF+P
Sbjct: 117 STKKWFCNGRGNTSGSHIVNHLVRAHYHEVTLHKEGPLGETVLECYNCGCKNVFKLGFVP 176
Query: 178 AKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVT 237
AKADSVV+LLCR PCA NSLKDM+W+ W+PLI DR FL WLVK+PT+ +Q R RQ++
Sbjct: 177 AKADSVVMLLCRLPCAQSNSLKDMDWNPANWQPLIVDRCFLPWLVKIPTDSDQARARQIS 236
Query: 238 SAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
QI KLEE+WKD+ +AT L+KPG+DE+P Q+ LRY D YQYQNI GPLVKLEADYDK
Sbjct: 237 GTQIGKLEELWKDDPDATLDTLQKPGIDEEPAQIQLRYTDAYQYQNILGPLVKLEADYDK 296
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
+LKESQTQ+ + VRWD+GLN+K +AYF+ ++ +GD
Sbjct: 297 KLKESQTQDGIIVRWDIGLNQKRLAYFNFSRQNGD 331
>gi|294657547|ref|XP_002770466.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
gi|199432775|emb|CAR65809.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
Length = 985
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/862 (51%), Positives = 584/862 (67%), Gaps = 62/862 (7%)
Query: 94 NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
N+ LP HAC YCG+H V+ CN C KWFCN + +++GSHI+ HLV ++H V+LH+D
Sbjct: 77 NEILPEHACAYCGVHTTNCVVKCNTCSKWFCNSKSNSNGSHIVTHLVLSRHNVVSLHEDS 136
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
LG+T LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD W+ LI
Sbjct: 137 DLGDTTLECYNCGNKNVFILGFVSAKQESVVVILCRLPCAQS---KDINWDTSHWQSLIE 193
Query: 214 DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDP-HQVL 272
DR FL W+ P+E E +T QI+KLE W+ N AT D+ DE+ +L
Sbjct: 194 DRQFLPWIAANPSEDELINTNLITHQQISKLEAQWRLNRNATINDINNDLEDEEEILPIL 253
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
+RY D +QYQ F PL+KLE D+DK LKESQ E+++V+W +GLN K +A F+L+
Sbjct: 254 MRYNDAFQYQRSFAPLIKLEGDFDKNLKESQALEHISVKWALGLNNKHLASFTLS----- 308
Query: 333 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQ 392
T E+ ++ VG
Sbjct: 309 --------------------------TFESNELKVAVG---------------------- 320
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKS 451
DE+ LRYS + W G G+++++P+ + +E LEL S PT T F+ +F+WK
Sbjct: 321 -DEIILRYSGLNQEPWQGNGYIVRLPNAYQEEFTLELNPSKLQPPTHLATDFTAEFVWKG 379
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
TS++RMQ A++ FA + +SVS+YIYH++LGH V + F LP FS PNL +LN SQ
Sbjct: 380 TSYERMQQAMKDFATEKESVSSYIYHKILGHEVAPIEFDIKLPNKFSHPNLTELNMSQTN 439
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT 571
AV+ +QRPLSLIQGPPGTGKTVTSATIVY L K + +LVCAPSN+AVD L +K++
Sbjct: 440 AVRSVLQRPLSLIQGPPGTGKTVTSATIVYHLSKLSKEKILVCAPSNVAVDHLADKLNLL 499
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM 631
GLKV+R+ AKSRE ++S V+ LALHN I N ELKKL++L+ E GELS +D ++
Sbjct: 500 GLKVIRLTAKSREDVESSVNDLALHN-IVNKSAKGELKKLIRLRNELGELSESDSRQLIK 558
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
L +++E +L+ DV+CCTCVGAGD RL +KF ++LIDES QA+EPE ++P++ GAKQ+
Sbjct: 559 LTRSSEMKILNKCDVVCCTCVGAGDKRLSNLKFRTVLIDESTQASEPEVLIPIVKGAKQV 618
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDH QLGPV++ KKA AGL QSLFERLVVLG P RLEVQYRM+P LS+FPSN FY
Sbjct: 619 ILVGDHQQLGPVILDKKAGDAGLKQSLFERLVVLGHVPIRLEVQYRMNPCLSEFPSNMFY 678
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EGSLQNGV A +R + FPWPV D PM+F+ G+EEI+GSG S++NR EA NVEKI
Sbjct: 679 EGSLQNGVTAKQRLIENSIFPWPVLDNPMMFWANYGREEISGSGNSFLNRVEAMNVEKII 738
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP--AKIYQEIEVASVDAFQGREKD 869
T+ + G++P QIGVITPYEGQRA++VQ+M +L + Y E+E+ SVDAFQGREKD
Sbjct: 739 TKLFKDGIEPSQIGVITPYEGQRAYIVQYMSMNSTLTELKEKYLEVEITSVDAFQGREKD 798
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVR+ND Q IGFL+DPRRLNVALTRAKYG++++GNP+ L + LWN+LL ++E+
Sbjct: 799 FIILSCVRANDSQVIGFLSDPRRLNVALTRAKYGLVILGNPRALCRNTLWNHLLIHFREK 858
Query: 930 KVLVEGPLNNLKESLILFSKPK 951
LV+G L+NL+ S++ + K
Sbjct: 859 GCLVDGSLDNLQLSMVQLNNLK 880
>gi|254585189|ref|XP_002498162.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
gi|238941056|emb|CAR29229.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
Length = 944
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/879 (51%), Positives = 595/879 (67%), Gaps = 62/879 (7%)
Query: 79 ELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINH 138
E+Q ++ +D + HAC YCGI P+ V+ CN C++WFCN + S SHI+NH
Sbjct: 36 EMQAQDAQDVLGTLDQQASSEHACAYCGIDSPSCVVKCNSCRRWFCNSKNGASTSHIVNH 95
Query: 139 LVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSL 198
LV A H V+LH + LG+TVLECY CG +N+F+LGF+ A+ ++VVVLLCR PCA
Sbjct: 96 LVLAHHNVVSLHPESDLGDTVLECYNCGCKNVFLLGFVSARGEAVVVLLCRIPCA---QA 152
Query: 199 KDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQD 258
K+ NWD EQW+PLI +R FL+W+ + P ++E+ R +T QI+KLE WK + AT D
Sbjct: 153 KNANWDTEQWQPLIENRQFLNWVAEEPNDEERLEARLITPTQISKLEAKWKSDKNATIND 212
Query: 259 LEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNK 318
++ P E+ LLR YQ
Sbjct: 213 IDAPEEQEEIPSALLR------YQ------------------------------------ 230
Query: 319 KSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 378
D Y+YQ +GPL+KLEADYDK LKESQ E+++V W +GLN + +A
Sbjct: 231 -------------DAYEYQRSYGPLIKLEADYDKTLKESQALEHISVTWSLGLNNRHLAS 277
Query: 379 FSLAKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAP 436
F+L+ + ++++ GDE+ LRYS W G G++++ P++F DE LELK S P
Sbjct: 278 FALSTFESNELKIAVGDEMILRYSGSLHPEWHGRGYIVRPPNSFQDEFTLELKPSKTPPP 337
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH 496
T TGF+ +FIWK TS+DRMQ AL+KFA+D +S+S ++Y+++LGH V ++ F LPK
Sbjct: 338 THLGTGFTAEFIWKGTSYDRMQDALKKFALDKKSISGFLYYKILGHQVVDIAFDVPLPKE 397
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
FS P LN SQ +AV+HA+QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAP
Sbjct: 398 FSIPFFAPLNASQSHAVEHALQRPLSLIQGPPGTGKTVTSATIVYHLSKLHKDRILVCAP 457
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
SN+AVD L K+ GLKVVR+ A+SRE ++S VS LALHN + + ELKKLL+LKE
Sbjct: 458 SNVAVDHLAAKLRMLGLKVVRLTARSREDVESSVSDLALHNLV-SRSAKGELKKLLKLKE 516
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
E GELS D K++ + K AE +L ADV+CCTCVGAGD R L KF ++LIDES QA+
Sbjct: 517 EVGELSVKDTKKFVKMVKIAESDILKKADVVCCTCVGAGD-RRLGAKFKTVLIDESTQAS 575
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQY 736
EPEC++P++ GA Q+ILVGDH QLGPV++ +KA AGL QSLFERL+ LG P RLEVQY
Sbjct: 576 EPECLIPIVKGAIQVILVGDHQQLGPVILERKAGDAGLKQSLFERLISLGHVPLRLEVQY 635
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGT 796
RM+P LS+FPSN FYEGSLQNGV ++R + FPWP+ + PM+F+ G+EEI+ +GT
Sbjct: 636 RMNPHLSEFPSNMFYEGSLQNGVTIEQRTVPNSTFPWPIHEVPMMFWANYGREEISANGT 695
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
SY+NR EA N E+I TR + G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y +E
Sbjct: 696 SYLNRIEAMNCERIITRLFKDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDTDLYVNVE 755
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
VASVDAFQGREKD II+SCVR+ND Q IGFL+D RR+NV LTRAKYG++++GNP+ LS
Sbjct: 756 VASVDAFQGREKDYIILSCVRANDQQSIGFLSDSRRMNVGLTRAKYGLVILGNPRALSTN 815
Query: 917 PLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
LWNNLL ++E+ LVEG LNNL+ + ++ +Q+ K
Sbjct: 816 VLWNNLLIHFREKGCLVEGSLNNLQLCTVQLTRVRQHKK 854
>gi|146411955|ref|XP_001481949.1| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/868 (51%), Positives = 585/868 (67%), Gaps = 80/868 (9%)
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
PHAC YCGIH V+ CN C KWFCN + GSHI++HL+ ++H+ V+LH++ LG+T
Sbjct: 36 PHACAYCGIHATNCVVKCNTCNKWFCNSKSGDKGSHIVSHLILSRHRIVSLHEESDLGDT 95
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
VLECY CG +N+F+LG++ AK +SVVV+LCR PCA Q KD+NWD QW+PLI +R FL
Sbjct: 96 VLECYNCGNKNVFILGYVSAKQESVVVILCRLPCAQQ---KDINWDTNQWQPLIEERQFL 152
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDP-HQVLLRYED 277
W+ P E +Q +T AQI+KLE W+ N +AT +D+++ G +E+ +L+RY D
Sbjct: 153 PWIAGNPEEHDQIEAIPITHAQISKLEAQWRLNRDATIEDIDQKGEEEEEVLPILMRYND 212
Query: 278 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQ 337
+QYQ FGPL+ LEA+YDK +KESQ E++T+RW +GLNK+ +A F L+
Sbjct: 213 AFQYQRAFGPLLHLEAEYDKGMKESQALEHITIRWAMGLNKRHLASFILS---------- 262
Query: 338 NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELK 397
T E +++ VG DE+
Sbjct: 263 ---------------------TFETSSLKVAVG-----------------------DEII 278
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGA-PTEATTGFSVDFIWKSTSFDR 456
L Y+ + W G G ++++P+ + +E LEL A PT TT F+ +F+WK TS++R
Sbjct: 279 LHYNGGDREPWQGSGFIVRLPNAYHNEFTLELNPQKNAPPTHLTTNFTAEFVWKGTSYNR 338
Query: 457 MQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA 516
MQ AL+ FAVD++SVS YIYHR+LGHNV+ V F +LP+ S PNL LN SQ AV+
Sbjct: 339 MQHALKSFAVDEKSVSGYIYHRILGHNVEPVEFSFNLPEKLSIPNLTALNESQENAVRTV 398
Query: 517 IQRPLSLIQGPPGTGKTVTSATIVYQL-----------------VKQTGSPVLVCAPSNI 559
+QRPLSLIQGPPGTGKT TSATI+Y L KQT +LVCAPSN+
Sbjct: 399 LQRPLSLIQGPPGTGKTFTSATIIYHLRNMINKKPSGKKSSKSKKKQTAEKILVCAPSNV 458
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L EKI G+KV+R+ AKSRE +S VS L+LHN I ++ N L+KL K G
Sbjct: 459 AVDHLAEKIANLGVKVMRLTAKSREDAESLVSHLSLHNLI--VQTNKRLQKLQDKKNAEG 516
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
EL + + + L + AEKS++++ +VIC TCVGAGD RL + F ++LIDES QA+EPE
Sbjct: 517 ELLAKEAVEFHKLTRKAEKSVMEDCEVICSTCVGAGDHRLDSMVFRAVLIDESTQASEPE 576
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
M+P++ GAKQ+ILVGDH QLGPV++ KKA AGL QSLFERLVVLG P RLEVQYRMH
Sbjct: 577 IMIPIVKGAKQVILVGDHQQLGPVILHKKAGDAGLKQSLFERLVVLGHVPIRLEVQYRMH 636
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
P LS+FPSN FYEGSLQNGV ++ R FPWPV D PM+F+ G+EEI+ SG SY+
Sbjct: 637 PCLSEFPSNMFYEGSLQNGVSSESRTFKNETFPWPVLDFPMMFWANYGREEISASGYSYL 696
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEV 857
NR EA NVEKI TR + G+K EQIGV+TPYEGQRA+++QHM GSL K Y E+EV
Sbjct: 697 NRVEAMNVEKIITRLFKQGVKAEQIGVVTPYEGQRAYILQHMLLTGSLVDKREQYSEVEV 756
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
ASVDAFQGREKD II+SCVR+N+ GIGFL+D RRLNVALTRAKYG++++GNP+ LSK
Sbjct: 757 ASVDAFQGREKDYIILSCVRANETHGIGFLSDSRRLNVALTRAKYGLVIVGNPRCLSKNK 816
Query: 918 LWNNLLNFYKEQKVLVEGPLNNLKESLI 945
LWN+LL ++E+ LVEGPL+NL+ S++
Sbjct: 817 LWNHLLIHFREKGCLVEGPLDNLQLSMV 844
>gi|363749513|ref|XP_003644974.1| hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888607|gb|AET38157.1| Hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/861 (50%), Positives = 581/861 (67%), Gaps = 62/861 (7%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YC I P V+ CN C KWFCN + TS SHI+NHLV + H V+LH + LG T
Sbjct: 70 HACSYCSIDSPGCVVKCNACDKWFCNSKHGTSSSHIVNHLVISHHNVVSLHSESDLGATT 129
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK+++VVV+LCR PCA K++NWD +QW+ LI DR LS
Sbjct: 130 LECYNCGCKNVFLLGFVSAKSEAVVVILCRLPCAQT---KNVNWDTDQWQSLIDDRKLLS 186
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ P E++Q + +T +QI+
Sbjct: 187 WVADEPNEEDQLKACMITPSQIS------------------------------------- 209
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
KLE + ++ +N T+ D+ L+++ + D YQYQ
Sbjct: 210 ----------KLEMKW-------RSNKNATIN-DIDLSEEQEEISPILMRYTDAYQYQRS 251
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD-MRLMQGDELKL 398
FGPL++LEADYD++LKESQ E+++V W +GL + +A FSL+ + + +++ GDE+ L
Sbjct: 252 FGPLIQLEADYDRQLKESQALEHISVTWSLGLKNRHLASFSLSTFESNGVKVAVGDEMIL 311
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAP-TEATTGFSVDFIWKSTSFDRM 457
RYS W G G+++++PD+F DE LELKS+ +P T TTGF+ +F+WK TS+ RM
Sbjct: 312 RYSGLNQTGWEGRGYILRLPDSFKDEYTLELKSTKSSPPTNLTTGFTAEFVWKGTSYGRM 371
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
Q ALRKFAVD +S+S Y+Y+++LGH+V ++ F LPK FS PN LN SQ A+KH +
Sbjct: 372 QEALRKFAVDKKSISGYLYYKILGHDVPDIEFEVDLPKEFSIPNFTKLNASQKNAIKHVL 431
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSATI+Y L K +LVCAPSN AVD L K+ GLKVVR
Sbjct: 432 QRPLSLIQGPPGTGKTVTSATIIYHLSKMHKERLLVCAPSNTAVDHLAAKLRDLGLKVVR 491
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAE 637
+ AKSRE ++S VS LALHN I+ ELKKLL+LKE+ GELS+ + + + L + E
Sbjct: 492 LTAKSREDVESSVSDLALHNLIKR-SAQGELKKLLRLKEDAGELSARETRLFAKLVRKNE 550
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
++L ADV+CCTCVGAGD RL KF ++LIDES QA+EPEC++PV+ G KQ+ILVGDH
Sbjct: 551 SAILKKADVVCCTCVGAGDKRL-DSKFRTVLIDESTQASEPECLIPVVKGTKQVILVGDH 609
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QLGPV++ +KA AGL QSLFE+LV LG P RLEVQYRM+P LS+FPSN FYEG+LQN
Sbjct: 610 QQLGPVILDRKAGNAGLKQSLFEKLVSLGHVPIRLEVQYRMNPYLSEFPSNMFYEGTLQN 669
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
GV ++R + + FPWP+ D PM+F+ G+EEI+ +GTSY+NR EA N E+I TR +
Sbjct: 670 GVTVEQRTILESSFPWPISDIPMMFWANYGREEISANGTSYLNRIEAINCERIITRLFKD 729
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+KP QIGVITPYEGQRA++VQ+MQ GS+ +Y +EV SVDAFQGREKD II+SCVR
Sbjct: 730 GVKPAQIGVITPYEGQRAYIVQYMQMNGSMDKDMYMTVEVGSVDAFQGREKDYIILSCVR 789
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
+NDHQ IGFL DPRRLNVALTRAKYG+ ++GNP L + LWN+LL ++E+ LVEG +
Sbjct: 790 ANDHQSIGFLVDPRRLNVALTRAKYGLAILGNPTSLFRNRLWNHLLIHFREKGCLVEGTM 849
Query: 938 NNLKESLILFSKPKQYFKKNN 958
+NL+ + ++ K + N
Sbjct: 850 DNLQLCTVQLTRSKNRRSRKN 870
>gi|50286349|ref|XP_445603.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524908|emb|CAG58514.1| unnamed protein product [Candida glabrata]
Length = 964
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/885 (51%), Positives = 606/885 (68%), Gaps = 57/885 (6%)
Query: 79 ELQFEEEEDDGN---EFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHI 135
EL+F +E GN E ++ HAC YCGI P VI CN C KWFCN + T SHI
Sbjct: 23 ELEFMQEVQ-GNLQVEPVERQAEGHACAYCGIDAPTSVIKCNSCSKWFCNSKNGTVNSHI 81
Query: 136 INHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQ 195
INHL+ + H V+LH + LG+TVLECY CG +N+FVLGF+ AK+++VVVLLCR PCA
Sbjct: 82 INHLILSHHHSVSLHPESDLGDTVLECYNCGCKNVFVLGFVSAKSEAVVVLLCRIPCAQS 141
Query: 196 NSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQE-QQRGRQVTSAQIAKLEEVWKDNAEA 254
K+ NWD +QW+PLI ++ FLSW+ + +++E + + + +T +QI+KLE W+ + A
Sbjct: 142 ---KNPNWDTDQWQPLIEEKQFLSWVAEPASDEEIKLKAKLITPSQISKLENKWRSDKYA 198
Query: 255 TFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 314
T D++ DE K++ D + E + + +R+
Sbjct: 199 TMDDVQ----DESK---------------------KVQDDILAGIGEEEDIPPLLLRYQ- 232
Query: 315 GLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKK 374
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN +
Sbjct: 233 -----------------DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVEWSLALNNR 275
Query: 375 SIAYFSLAKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SS 432
+A F+L+ + ++++ GDE+ L YS + W G G ++++P++F D LEL+ S
Sbjct: 276 HLASFALSTFESSELKVAVGDEMILSYSGIQGEDWKGTGFIVRLPNSFKDMFTLELRPSK 335
Query: 433 AGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 492
PT TTGF+ +FIWK+TS+DRMQ AL+ FAVD +S+S Y+Y+++LGH V ++ F
Sbjct: 336 TPPPTHLTTGFTAEFIWKATSYDRMQTALKNFAVDKKSISGYLYYKILGHQVVDLHFDVP 395
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
+PK S P LN SQ AV+H +QRPLSLIQGPPGTGKTVTSA+IVY L K +L
Sbjct: 396 MPKELSLPGYTKLNASQSKAVEHVLQRPLSLIQGPPGTGKTVTSASIVYHLSKIRKDRIL 455
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL 612
VCAPSNIAVD L K+ GLKVVRV AKSRE ++S VS LALHN + LKKLL
Sbjct: 456 VCAPSNIAVDHLAAKLRDLGLKVVRVTAKSREDVESSVSSLALHNLVAK-GAKGVLKKLL 514
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
+LKEE GELS+ D KR+ L K EKS+L+ ADV+CCTCVGAGD R L +KF ++LIDES
Sbjct: 515 KLKEEAGELSARDTKRFISLVKKTEKSILEQADVVCCTCVGAGD-RRLDMKFRTVLIDES 573
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
QA+EPEC++P++ GAKQ+ILVGDH QLGPV++ +KA+ AGL QSLFERL+ LG P RL
Sbjct: 574 TQASEPECLIPIVKGAKQVILVGDHQQLGPVILERKASDAGLKQSLFERLISLGHIPIRL 633
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
EVQYRM+P LS+FPSN FYEGSLQNGV ++R L+ FPWP+ PM+F+ G EE++
Sbjct: 634 EVQYRMNPFLSEFPSNMFYEGSLQNGVTEEQRTLANSTFPWPINGIPMMFWANYGSEEMS 693
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
+GTSY+NRTEA N E+I TR R G+KPEQIGVITPYEGQRA+++Q+MQ G+L ++Y
Sbjct: 694 ANGTSYLNRTEAMNCERIITRLFRDGVKPEQIGVITPYEGQRAYVLQYMQMNGALDKELY 753
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
+EVASVDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG+I++GNP+
Sbjct: 754 SNVEVASVDAFQGREKDFIILSCVRANEQQMIGFLRDPRRLNVGLTRAKYGLIILGNPRS 813
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
LS+ LWN+LL ++++ LVEG L NL+ + ++P KKN
Sbjct: 814 LSRNTLWNHLLLHFRQKGCLVEGVLENLQVCTVPLTRPN--VKKN 856
>gi|333038075|gb|AEF13567.1| hypothetical protein PICST_73544 [Scheffersomyces stipitis CBS
6054]
Length = 1021
Score = 895 bits (2314), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/862 (50%), Positives = 577/862 (66%), Gaps = 62/862 (7%)
Query: 88 DGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEV 147
D E+ + LP HAC YCG+H V+ CN C KWFCN + + + SHI+ HLV ++H +V
Sbjct: 73 DAAEYSHTNLPEHACAYCGVHSTHSVVKCNTCNKWFCNSKSNGNSSHIVTHLVMSRHNQV 132
Query: 148 TLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQ 207
+LH+D LG+T LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD
Sbjct: 133 SLHEDSDLGDTTLECYNCGNKNVFILGFVSAKQESVVVILCRLPCAQS---KDVNWDTSH 189
Query: 208 WKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDED 267
W+ LI DR FL+W+ VP+E+E + +T QI+
Sbjct: 190 WQSLIEDRQFLTWVAAVPSEEELVNAKLITPNQIS------------------------- 224
Query: 268 PHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 327
KLEA + RL T +++ N + +
Sbjct: 225 ----------------------KLEAQW--RLNRDTTIDDIENN-----NDEQEEVLPIL 255
Query: 328 KTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG- 386
D +QYQ F PLVKLEADYD LKESQ E++ V+W +GLN + + F+L+ +
Sbjct: 256 MRYNDAFQYQRSFAPLVKLEADYDMNLKESQALEHIQVKWALGLNNRHLTSFTLSTYESN 315
Query: 387 DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAP-TEATTGFSV 445
D+++ GDE+ LRY+ + W G G ++++P+ +E LEL ++ AP T +T F+
Sbjct: 316 DLKVAVGDEIILRYTGAHDEKWEGRGFIVRLPNAHQEEFTLELNAAKTAPPTHLSTDFTA 375
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 505
+F+WK TS++RMQ A++ FAVD++SVS YIYH+LLGH V+ V F LP+ FS PNL +L
Sbjct: 376 EFVWKGTSYERMQDAMKLFAVDEESVSGYIYHKLLGHEVEPVEFDVKLPQRFSHPNLTEL 435
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLT 565
N SQ+ AV+ +QRPLSLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L
Sbjct: 436 NVSQINAVRSVLQRPLSLIQGPPGTGKTVTSATIIYHLTKLNKEKILVCAPSNVAVDHLA 495
Query: 566 EKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSAD 625
EK+ GLKV+R+ A+SRE ++S VS L+LHN + N ELKKLL+L+ E GELS +D
Sbjct: 496 EKLDSLGLKVLRLTARSREDVESSVSHLSLHNLV-NRTAKGELKKLLRLRNELGELSLSD 554
Query: 626 EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI 685
K L + +E +L DV+CCTCVGA D RL IKF ++LIDES QA+EPE ++P++
Sbjct: 555 SKSLIRLIRTSESKILAQCDVVCCTCVGAADRRLSNIKFRTVLIDESTQASEPEVLIPIV 614
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKF 745
GAKQ+ILVGDH QLGPV++ KKA AGL QSLFERLV+LG P RLEVQYRM+P LS+F
Sbjct: 615 KGAKQVILVGDHQQLGPVILDKKAGDAGLRQSLFERLVILGHVPIRLEVQYRMNPCLSEF 674
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS 805
PSN FYEGSLQNGV + +R++ FPWPV D PM+F+ G+EEI+GSG SY+NR EA
Sbjct: 675 PSNIFYEGSLQNGVTSAQRRIESSTFPWPVYDSPMMFWANYGREEISGSGNSYLNRVEAM 734
Query: 806 NVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP--AKIYQEIEVASVDAF 863
NVEKI TR + G+K EQIGVITPYEGQRA+LV +M +L + Y E+EV SVDAF
Sbjct: 735 NVEKIITRLFKDGVKAEQIGVITPYEGQRAYLVSYMSINSTLAEFKEQYLEVEVTSVDAF 794
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREKD II+SCVR+N IGFL+DPRRLNVALTRAKYG++V+GNP+ L + LWN LL
Sbjct: 795 QGREKDYIILSCVRANSSHQIGFLSDPRRLNVALTRAKYGLVVLGNPRALCRNRLWNQLL 854
Query: 924 NFYKEQKVLVEGPLNNLKESLI 945
++E+ LV+GPL+NL+ S++
Sbjct: 855 IHFREKGCLVDGPLDNLQLSMV 876
>gi|448081930|ref|XP_004195009.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359376431|emb|CCE87013.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/871 (50%), Positives = 584/871 (67%), Gaps = 62/871 (7%)
Query: 79 ELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINH 138
+L E+ D E ELPPHAC YCG+H P V+ C+ C KWFCN + + SGSHI+ H
Sbjct: 37 DLGDEQGVDSEIEVSEIELPPHACAYCGLHSPNSVVKCHGCNKWFCNTKSNPSGSHIVTH 96
Query: 139 LVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSL 198
LV ++HK V+LH++ LG+T LECY CG +N+F+LG++ AK +SVVV+LCR PCA
Sbjct: 97 LVLSRHKVVSLHEESDLGDTTLECYNCGNKNVFLLGYVSAKQESVVVILCRLPCAQS--- 153
Query: 199 KDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQD 258
KD+NWD W+ LI DR FL W+ VP E+E + ++ QI+KLE W+ N +AT D
Sbjct: 154 KDINWDVSSWQSLIDDRQFLPWIAAVPGEEELIHTQLISYKQISKLEAQWRLNRDATIND 213
Query: 259 LEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNK 318
+ G D D + +L P++ +R++
Sbjct: 214 V---GGDLDDEEEVL-------------PIL--------------------MRYN----- 232
Query: 319 KSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 378
D +QYQ F PLVKLE+++DK LKESQ E++ VRW +GLN + +A
Sbjct: 233 -------------DAFQYQRSFAPLVKLESEFDKSLKESQALEHIQVRWSLGLNNRHLAS 279
Query: 379 FSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAP 436
F+L+ + ++++ GDE+ LRY + W G G ++++P + ++ LEL S P
Sbjct: 280 FTLSTFETNELKVAVGDEIILRYGGLSQDPWEGRGFIVRLPSAYQEDFTLELNPSKVPPP 339
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH 496
TTGF+ +F+WK TS+DRMQ A++ FA+ +SVS+YIYH++LGH V+ V F LPK
Sbjct: 340 VHLTTGFTAEFVWKGTSYDRMQQAMKTFALKKESVSSYIYHKILGHEVEPVEFDMKLPKK 399
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
S +L +LN SQ AVK +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAP
Sbjct: 400 LSHASLTELNSSQTNAVKSVLQRPLSLIQGPPGTGKTVTSATIVYHLSKLHKKRILVCAP 459
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
SN+AVD L K++ GLKVVR+ AKSRE ++S V LALHN++ + ELKKL ++
Sbjct: 460 SNVAVDHLANKLNLLGLKVVRLTAKSREDVESSVKHLALHNKVYD-SARGELKKLYNMRN 518
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
GELS D KR L + AE LL + DV+CCTCVGAGD RL + KF ++LIDES QA+
Sbjct: 519 SLGELSEEDTKRLIQLSRTAEMRLLSSCDVVCCTCVGAGDRRLARFKFRTVLIDESTQAS 578
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQY 736
EPE ++P++ GAKQ+ILVGDH QLGPV++ K+A AGL QSLFERLVVLG P RLEVQY
Sbjct: 579 EPEVLIPIVKGAKQVILVGDHQQLGPVILEKRAGDAGLKQSLFERLVVLGHVPIRLEVQY 638
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGT 796
RM+P LS+FPSN FYEGSLQNGV ER + FPWPV D PM+F+ G+EEI+GSG
Sbjct: 639 RMNPCLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFWANYGREEISGSGH 698
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP--AKIYQE 854
S++NR EA NVEKI TR + G+ PEQIGVITPYEGQRA+L+Q+M +L Y E
Sbjct: 699 SFLNRVEAMNVEKIITRLFKDGIGPEQIGVITPYEGQRAYLIQYMSINSTLTEMKDRYLE 758
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
+E+ SVDAFQGREKD II+SCVR+ND Q IGFL+D RRLNVALTRAKYG++++GNP+ L
Sbjct: 759 VEITSVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRAKYGLVILGNPRALC 818
Query: 915 KQPLWNNLLNFYKEQKVLVEGPLNNLKESLI 945
+ LWN+LL ++E+ LV+G L+NL+ S+I
Sbjct: 819 RNTLWNHLLVHFREKGCLVDGTLDNLQLSMI 849
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/854 (52%), Positives = 589/854 (68%), Gaps = 69/854 (8%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGH-TSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
AC YCGI + + V C KKWFCNGR + S +I HLVR+++KEV LH+ PLG+
Sbjct: 4 ACAYCGISNVSCVAQCVKTKKWFCNGRSNGLPASCLIYHLVRSRNKEVRLHESSPLGDMT 63
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQN---SLKDMNWDQEQWKPLIADRS 216
LECY G N+F LGF+P K ++VVVL+ R AAQ+ +LK++N D W+PLI D+
Sbjct: 64 LECYVTGATNVFNLGFVPCKDENVVVLVTRE--AAQSNPATLKELNLDLALWEPLIQDKV 121
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
FL WL+++P ++E R R V ++ KLEE+WK N EAT D+E D + V L YE
Sbjct: 122 FLPWLLQMPDKKEIDRARPVNPGKVIKLEELWKTNPEATLDDVENDDGDGEVRPVALTYE 181
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQY 336
D + YQ +FGPL++LEADYDK +ESQT+++VTVRWD+GLNK+ IAYFS
Sbjct: 182 DAHLYQGVFGPLIQLEADYDKAQRESQTKDDVTVRWDIGLNKRRIAYFS----------- 230
Query: 337 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDEL 396
FG AD EN +++ T GD L
Sbjct: 231 ---FG------AD-----------EN-----------------AVSVTLGD-------SL 246
Query: 397 KLRY---SYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
+LR + + ++W G G VIK +EVG+E+ AP E T G+SVDF+WK TS
Sbjct: 247 QLRLLIQTKNEQRSWQGQGVVIKFTAQ--EEVGVEM-YGMDAPVEYTNGYSVDFLWKGTS 303
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
++R Q AL FA D+ SVS YIY +L+G + +++ PK +AP LP+LN+SQ AV
Sbjct: 304 YERAQQALESFAEDETSVSGYIYLKLMGKDPEDMFLSGDFPKKLTAPGLPELNQSQHDAV 363
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
K +QRPLSL+QGPPGTGKTVTSAT+VY L K+ V+VCAPSN+AVD L EKI +TGL
Sbjct: 364 KTVLQRPLSLVQGPPGTGKTVTSATLVYHLAKRGNGQVIVCAPSNVAVDHLAEKIEKTGL 423
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNM--EMNSELKKLLQLKEETGELSSADEKRYRM 631
KVVR+ ++SRE + S V L LH Q+ N+ + +KL QLK E GELS+ DEK+YR
Sbjct: 424 KVVRISSRSREHLVSSVEHLTLHYQVANIGGSTHKAFQKLQQLKNELGELSAGDEKKYRN 483
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
+K E+ +L+NADVIC T VGAGDPRL +F +LIDES QATEPEC++P+++GAKQ+
Sbjct: 484 AQKKLEREILENADVICTTAVGAGDPRLANFRFRMVLIDESTQATEPECLIPIVMGAKQV 543
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
++VGDH QLGPVV CK+A AGL+QSLFERL+ LGI+P RL++QYRMHP LS+FPSN FY
Sbjct: 544 VMVGDHKQLGPVVTCKQAYAAGLAQSLFERLIALGIQPIRLQIQYRMHPCLSEFPSNTFY 603
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
+G+LQNGV A ER LS IDFPWPVP KPM+F+ GQEE++ SGTS++NR EAS VEK
Sbjct: 604 DGTLQNGVSAIERTLSHIDFPWPVPSKPMMFWSQTGQEEMSASGTSFLNRAEASAVEKCV 663
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T + G+ PEQIGV+TPYEGQRA++VQHM G L ++Y++I+VASVD+FQG+EKD I
Sbjct: 664 THLLNAGVSPEQIGVVTPYEGQRAYVVQHMTRVGVLHPQLYKDIQVASVDSFQGKEKDFI 723
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
IM+CVRSN+ GIGFL+DPRRLNVA+TRA+ G+IVIGNPKVL+KQ L++ +L ++E
Sbjct: 724 IMTCVRSNEKSGIGFLSDPRRLNVAITRARSGLIVIGNPKVLNKQHLFHEMLTHFRENGC 783
Query: 932 LVEGPLNNLKESLI 945
LVEG L +LKE ++
Sbjct: 784 LVEGTLGSLKECMV 797
>gi|448086434|ref|XP_004196100.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359377522|emb|CCE85905.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 958
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/867 (50%), Positives = 583/867 (67%), Gaps = 62/867 (7%)
Query: 83 EEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRA 142
E++ D E E PPHAC YCG+H P V+ C+ C KWFCN + + SGSHI+ HLV +
Sbjct: 41 EQDVDSEIEESEIEFPPHACAYCGLHSPNSVVKCHGCNKWFCNTKSNPSGSHIVTHLVLS 100
Query: 143 KHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMN 202
+HK V+LH++ LG+T LECY CG +N+F+LG++ AK +SVVV+LCR PCA KD+N
Sbjct: 101 RHKVVSLHEESDLGDTTLECYNCGNKNVFLLGYVSAKQESVVVILCRLPCAQS---KDIN 157
Query: 203 WDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP 262
WD W+ LI DR FL W+ VP+E+E + ++ QI+KLE W+ N +AT D+
Sbjct: 158 WDVSSWQSLIDDRQFLPWIAAVPSEEELIHTQLISYKQISKLEAQWRLNRDATINDV--- 214
Query: 263 GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIA 322
G D D + +L P++ +R++
Sbjct: 215 GGDLDDEEEVL-------------PIL--------------------MRYN--------- 232
Query: 323 YFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 382
D +QYQ F PLVKLE+++DK LKESQ E++ VRW +GLN + +A F+L+
Sbjct: 233 ---------DAFQYQRSFAPLVKLESEFDKSLKESQALEHIQVRWSLGLNNRHLASFTLS 283
Query: 383 KTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEAT 440
+ ++++ GDE+ LRY +W G G ++++P + ++ LEL S P T
Sbjct: 284 TFETNELKVAVGDEIILRYGGLNQDSWEGRGFIVRLPSAYQEDFTLELNPSKVPPPVHLT 343
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
+GF+ +F+WK TS+DRMQ A++ FA+ +SVS+YIYH++LGH V+ V F LPK S
Sbjct: 344 SGFTAEFVWKGTSYDRMQQAMKTFALKKESVSSYIYHKILGHEVEPVEFDMKLPKKLSHA 403
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
+L +LN SQ AVK +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+A
Sbjct: 404 SLTELNSSQTNAVKSVLQRPLSLIQGPPGTGKTVTSATIVYHLSKLHKKRILVCAPSNVA 463
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VD L K++ GLKVVR+ AKSRE ++S V LALHN++ + ELKKL ++ GE
Sbjct: 464 VDHLANKLNLLGLKVVRLTAKSREDVESSVKHLALHNKVYD-SAKGELKKLYNMRNSLGE 522
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LS D KR L + AE LL + DV+CCTCVGAGD RL + KF ++LIDES QA+EPE
Sbjct: 523 LSEDDTKRLIQLSRTAEMRLLSSCDVVCCTCVGAGDRRLTRFKFRTVLIDESTQASEPEV 582
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
++P++ GAKQ+ILVGDH QLGPV++ K+A AGL QSLFERLVVLG P RLEVQYRM+P
Sbjct: 583 LIPIVKGAKQVILVGDHQQLGPVILEKRAGDAGLKQSLFERLVVLGHVPIRLEVQYRMNP 642
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEGSLQNGV ER + FPWPV D PM+F+ G+EEI+GSG S++N
Sbjct: 643 CLSEFPSNMFYEGSLQNGVTTKERLIKNASFPWPVIDHPMMFWANYGREEISGSGHSFLN 702
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP--AKIYQEIEVA 858
R EA NVEKI TR + G+ PEQIGVITPYEGQRA+L+Q+M +L Y E+E+
Sbjct: 703 RVEAMNVEKIITRLFKDGIGPEQIGVITPYEGQRAYLIQYMSINSTLTEMKDRYLEVEIT 762
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
SVDAFQGREKD II+SCVR+ND Q IGFL+D RRLNVALTRAKYG++++GNP+ L + L
Sbjct: 763 SVDAFQGREKDFIILSCVRANDQQTIGFLSDSRRLNVALTRAKYGLVILGNPRALCRNTL 822
Query: 919 WNNLLNFYKEQKVLVEGPLNNLKESLI 945
WN+LL ++E+ LV+G L+NL+ S+I
Sbjct: 823 WNHLLVHFREKGCLVDGTLDNLQLSMI 849
>gi|50303751|ref|XP_451821.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640953|emb|CAH02214.1| KLLA0B06435p [Kluyveromyces lactis]
Length = 969
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/894 (50%), Positives = 603/894 (67%), Gaps = 64/894 (7%)
Query: 66 DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCN 125
D+ + N L E E G + HAC YCGI + + V+ CNIC KWFCN
Sbjct: 24 DDDDKNFFYDTDEMLDEEYSEFHGTAANTDPIAEHACAYCGIDNTSCVVKCNICSKWFCN 83
Query: 126 GRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVV 185
+ T+ SHI+NHLV + H V+LH D LG+T LECY CG N+FVLGF+PAK+++VVV
Sbjct: 84 SKNGTNSSHIVNHLVLSHHSSVSLHPDSELGDTTLECYNCGRTNVFVLGFVPAKSEAVVV 143
Query: 186 LLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLE 245
LLCR PCA +K++NWD + W+PLI +R LSW+ + P+E++Q + R +T
Sbjct: 144 LLCRLPCA---KMKNVNWDTDNWQPLIEERKMLSWVAEEPSEEDQLKARMIT-------- 192
Query: 246 EVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQ 305
P Q+ KLEA + K K +
Sbjct: 193 ----------------------PSQI-----------------TKLEARW-KSNKNATIM 212
Query: 306 ENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTV 365
+ V D + + Y D YQYQ FGPL++LEADYDK+LKESQ E+++V
Sbjct: 213 DIDMVEQDEDIPPTLMRY-------TDAYQYQRSFGPLIQLEADYDKQLKESQALEHISV 265
Query: 366 RWDVGLNKKSIAYFSLAKTDG-DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDE 424
WD+ LN + +A F+L+ + ++++ GDE+ L+YS W+G G +I++P++F DE
Sbjct: 266 TWDLALNNRHLATFALSTFESNELKVAVGDEMILKYSGPQHADWTGKGFIIQLPNSFKDE 325
Query: 425 VGLELKSSAGAP-TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN 483
LELK S P T TTGF+ F+W+ TS+ RMQ ALRKFAV +S+S ++Y+++LG
Sbjct: 326 FTLELKPSQKTPPTNCTTGFTAVFVWRGTSYIRMQEALRKFAVTKKSLSGFLYYKILGQE 385
Query: 484 VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL 543
V +V F LPK P+ +LN+SQ AVKH +QRPLSLIQGPPGTGKTVTSATIVY L
Sbjct: 386 VPDVEFDVELPKSIFVPHFTELNQSQSNAVKHVLQRPLSLIQGPPGTGKTVTSATIVYHL 445
Query: 544 VKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI-RNM 602
K VLVCAPSN+AVD L K+H GLKVVR+ AKSRE ++S VS LALHN + R+
Sbjct: 446 SKIHKQRVLVCAPSNVAVDHLAAKLHSMGLKVVRLTAKSREDVESSVSELALHNLVSRSA 505
Query: 603 EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
E +LKKLL LKE+TGELSS+D ++ L + +E +++ ADVICCTCVGAGD RL
Sbjct: 506 E--GKLKKLLNLKEKTGELSSSDTTKFVKLVRKSEATIIQKADVICCTCVGAGDKRL-DY 562
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
KF ++LIDES QA+EPEC++P++ GAKQ++LVGDH QLGPV++ +KA AGL QSLFERL
Sbjct: 563 KFRTVLIDESTQASEPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAGDAGLKQSLFERL 622
Query: 723 VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
+ LG P RLEVQYRM+P+LS+FPSN FYEGSLQNGV ++R +++ FPWP+ PM+F
Sbjct: 623 ISLGHIPIRLEVQYRMNPQLSEFPSNMFYEGSLQNGVTIEQRTIARSTFPWPIHTIPMMF 682
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
+ G+EEI+G+GTSY+NR EA N EKI TR + G+KPEQIGVITPYEGQRA++VQ+MQ
Sbjct: 683 WANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEGQRAYVVQYMQ 742
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
GS+ +Y +EVASVDAFQGREKD II+SCVR+N+ IGFL+DPRRLNVALTRAKY
Sbjct: 743 MNGSMEKSLYMGVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRRLNVALTRAKY 802
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
G+I++GNP+ LS+ LW++LL ++E+ LVEG L+NL+ + +KP + +K
Sbjct: 803 GLIILGNPRALSRNSLWSHLLLHFREKGCLVEGFLDNLQLCTVQLTKPSRAPRK 856
>gi|403215170|emb|CCK69670.1| hypothetical protein KNAG_0C05720 [Kazachstania naganishii CBS
8797]
Length = 1000
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/851 (51%), Positives = 581/851 (68%), Gaps = 62/851 (7%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
AC YCG+ + V+ CN+C KWFCN + T+ SHI+NHLV + H V+LH + LG+TVL
Sbjct: 90 ACAYCGVDQASSVVKCNVCSKWFCNSKNGTNSSHIVNHLVLSHHSVVSLHPESDLGDTVL 149
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
ECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+ NWD +QW PLI DR FL W
Sbjct: 150 ECYQCGRKNVFLLGFVSAKSEAVVVLLCRMPCAQG---KNPNWDTDQWLPLIQDRQFLPW 206
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
+ P ++ + R +T +QI+KLE W+ N +AT D+E E +LLR
Sbjct: 207 VAAEPADENKLAARLITPSQISKLEAKWRSNRDATINDIETTEEQESIAPLLLR------ 260
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIF 340
YQ D Y+YQ +
Sbjct: 261 YQ-------------------------------------------------DAYEYQRSY 271
Query: 341 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-DMRLMQGDELKLR 399
GPL+KLEAD+DK+LKESQ E+++V W + LN + + F+L+ + ++++ GDE+ L
Sbjct: 272 GPLIKLEADHDKQLKESQALEHISVSWSLALNNRHLVSFALSTYESNELKVAVGDEMSLW 331
Query: 400 YSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
YS + W G G+++++P+++ D LELK S PT TTGF+ +FIWK TS+DRMQ
Sbjct: 332 YSGLQNPDWEGRGYIVRLPNSYQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQ 391
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
AL+KFAVD +S+S ++Y+++LGH V +V F LPK FS + LN SQ AVKH ++
Sbjct: 392 DALKKFAVDKKSISGFLYYKILGHEVVDVSFDVPLPKEFSISHFAHLNASQSNAVKHVLE 451
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+AVD L K+ GLKVVR+
Sbjct: 452 RPLSLIQGPPGTGKTVTSATIVYHLAKIHKDRILVCAPSNVAVDHLASKLRDLGLKVVRL 511
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
AKSRE ++S VS LALHN + ELKKLL+LK+E GELS+ +R+ L K AE
Sbjct: 512 TAKSREDVESSVSDLALHNLVAKSSQ-GELKKLLKLKDEVGELSAVGTRRFVKLVKKAEL 570
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
+L ADV+CCTCVGAGD RL +F ++LIDES QATEPEC++P++ GAKQ+ILVGDH
Sbjct: 571 EILAKADVVCCTCVGAGDKRL-DTRFRTVLIDESTQATEPECLIPIVKGAKQVILVGDHQ 629
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+P LS+FPSN FYEG+LQNG
Sbjct: 630 QLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPHLSEFPSNMFYEGTLQNG 689
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V ++R + FPWP+ PM+F+ G+EEI+G+GTSY+NR EA N E+I T+ R G
Sbjct: 690 VTIEQRTVLNSTFPWPIHGVPMMFWANYGREEISGNGTSYLNRIEAMNCERIITKLFRDG 749
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+KPEQIGVITPYEGQRA+++Q+MQ G++ +Y ++EVASVDAFQGREKD II+SCVR+
Sbjct: 750 VKPEQIGVITPYEGQRAYVLQYMQMNGAMDKSLYLKVEVASVDAFQGREKDYIILSCVRA 809
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ LS+ LWN+LL ++E+ LVEG L+
Sbjct: 810 NEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLSRNLLWNHLLVHFREKGCLVEGALD 869
Query: 939 NLKESLILFSK 949
NL+ + +K
Sbjct: 870 NLQLCTVQLTK 880
>gi|164659902|ref|XP_001731075.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
gi|159104973|gb|EDP43861.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
Length = 1019
Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/879 (48%), Positives = 577/879 (65%), Gaps = 59/879 (6%)
Query: 75 QKLHELQFEEEEDDGNEFFNKE--LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
+ L+E EE E+D E LP HAC YCG+ D VI C +C KWFCNG G T+
Sbjct: 70 EPLYEYDQEEREEDKEAPTEPEEILPEHACAYCGLADVDCVIKCTVCNKWFCNGSGKTTS 129
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+ HLVRA+HK V LH PLG+TV ECYTCG +N FVLGF+PAK ++VV+LLCRTPC
Sbjct: 130 SHIVTHLVRARHKAVMLHPMSPLGDTVPECYTCGSKNPFVLGFLPAKGEAVVMLLCRTPC 189
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
+ KDM+WD QW PLI +R+FLSW VK+P+ ++Q+ RQ+TS QI KLE++W++N
Sbjct: 190 NFAANTKDMDWDASQWSPLIENRAFLSWFVKIPSLKQQKSARQITSDQIRKLEDLWRENE 249
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
AT +D+E P + +++L E+
Sbjct: 250 LATLRDVENP-------------------------------EQERKLPETM--------- 269
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
I Y SLA QY IF L+ +E YDK++KE+ Q ++TVRW+ N
Sbjct: 270 --------IKYDSLA-------QYYEIFRVLLSVEEAYDKKIKENLAQHDITVRWEETKN 314
Query: 373 KKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKS 431
+ + L + + G++RL GDEL LRY+ + W V++ EV E+
Sbjct: 315 ML-LVWLRLPQLESGEIRLSMGDELLLRYTGSMAPAWESTVTVVRFSPTSSMEVACEVPK 373
Query: 432 SAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC 491
P E TT + ++F+W ++ RM+ AL +F+ +S Y+ LLG + +
Sbjct: 374 HLSPPLECTTNYMLEFVWIGITYSRMKNALSRFSRGRPCMSTYLQKVLLGIPSKAIPLQV 433
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
+P+ LP+LN SQ+ A+K + PLSLIQGPPGTGKTVTSA+++Y LV+ +
Sbjct: 434 QMPRRLHVSGLPELNYSQLTALKTVLTSPLSLIQGPPGTGKTVTSASLIYHLVQMKRGKI 493
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL 611
LVCAPSN+AVDQLTEK+HRTGLKVVR+ ++ RE I S V FLALH Q+ +E N+EL L
Sbjct: 494 LVCAPSNVAVDQLTEKLHRTGLKVVRLVSRMRETISSQVRFLALHEQVAQVEENTELSHL 553
Query: 612 LQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDE 671
++ K GELS+ +E+RYR E+ +LD ADVIC TC + D RL +F ++LIDE
Sbjct: 554 IEQKRNNGELSTMEERRYRSQVFQREREILDAADVICTTCSSSADRRLHSYEFQTVLIDE 613
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
+ QA EPEC++P++ G +QL+LVGDH QLGPVV+ +K A AG++ SLFERLV+LG++P R
Sbjct: 614 ATQAVEPECLIPIVRGCRQLVLVGDHKQLGPVVLNRKVADAGMNLSLFERLVLLGVKPRR 673
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEI 791
LEVQYRMHP LS+FPSN FY+G LQNGV A ER + PWPVP+ PM+FY GQEEI
Sbjct: 674 LEVQYRMHPALSEFPSNMFYDGMLQNGVSAHERLRRNVAIPWPVPNMPMMFYQNLGQEEI 733
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI 851
+ SGTSY+NRTEAS+VEK+ T ++ G+ E IGV+TPYEGQR F++ +MQ GS+
Sbjct: 734 SASGTSYLNRTEASSVEKLVTTLLKAGVAAEHIGVVTPYEGQRNFVINYMQLHGSMMKDA 793
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPK 911
Y+ +EVASVDAFQGREKD II+SCVRSN GIGFL+DPRRLNVALTRA++G+I+IGNP+
Sbjct: 794 YRNVEVASVDAFQGREKDYIIVSCVRSNSSLGIGFLSDPRRLNVALTRARFGLILIGNPR 853
Query: 912 VLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
+L K PLW +LL +K++ +LVEG L+NL+ S++ F P
Sbjct: 854 ILCKNPLWYHLLVHFKDRNLLVEGALSNLQPSMVRFGPP 892
>gi|149237651|ref|XP_001524702.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451299|gb|EDK45555.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 977
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/855 (52%), Positives = 576/855 (67%), Gaps = 62/855 (7%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
+E+ HAC YCG+ P VI CN C KWFCN + ++S SHI+ HLV ++H +V+LH++
Sbjct: 54 QEVCEHACAYCGVDTPNAVIKCNTCNKWFCNDKTNSSSSHIVTHLVMSRHNQVSLHEESD 113
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LGET LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD W+ LI D
Sbjct: 114 LGETTLECYNCGNKNVFMLGFVSAKQESVVVILCRLPCARS---KDINWDTSHWQSLIED 170
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLR 274
R FLSWL P E+ RQVT P Q+
Sbjct: 171 RQFLSWLAPPPGEEGLINARQVT------------------------------PQQI--- 197
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
KLEA + RL T +V DV + + DG+
Sbjct: 198 --------------SKLEAQW--RLNRDATINDVNNN-DV----QEEEVLPILMRYNDGF 236
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-DMRLMQG 393
QYQ FGPLVKLEADYDK LKESQ E++ V+W +GLN + +A F+L + ++++ G
Sbjct: 237 QYQRSFGPLVKLEADYDKNLKESQALEHIQVKWALGLNNRHLASFTLMTYETTNLKVAVG 296
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKST 452
DE+ LRY+ + W G G ++++P+++ +E LEL S PT T GF+ +F+WK T
Sbjct: 297 DEIILRYNGSQQEPWEGSGFILRLPNSYQEEFTLELNPSKIPPPTNLTNGFTAEFVWKGT 356
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYA 512
S+DRMQ A++ FA D++SVS+YIYH+LLGH+V + F LPK FS P L +LN SQ A
Sbjct: 357 SYDRMQQAMKDFATDEESVSSYIYHKLLGHDVAPIEFDITLPKKFSHPKLTELNISQTNA 416
Query: 513 VKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTG 572
V+ +QRPLSLIQGPPGTGKTVTSATI+Y L + +LVCAPSN+AVD L K+ G
Sbjct: 417 VRSVLQRPLSLIQGPPGTGKTVTSATIIYHLSRSNKEKILVCAPSNVAVDHLAAKLDTLG 476
Query: 573 LKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRML 632
LKVVR+ AKSRE ++S V LALHN I + ELKKLL+LK E GELS D K +
Sbjct: 477 LKVVRLTAKSREDVESSVGHLALHN-IVSKTAKGELKKLLKLKNEVGELSMEDSKSFIRN 535
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLI 692
+ +E +L ADV+CCTCVGA D RL + KF ++LIDES QA+EPE ++P++ GAKQ+I
Sbjct: 536 LRTSELKILSKADVVCCTCVGAADKRLAQFKFRTVLIDESTQASEPEVLIPIVKGAKQVI 595
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYE 752
LVGDH QLGPV++ +KAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN FYE
Sbjct: 596 LVGDHQQLGPVILDRKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNMFYE 655
Query: 753 GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITT 812
GSLQNGV + +R + + FPWPV D PM+F+ G+EE++GSG SY+NR EA NVE+I T
Sbjct: 656 GSLQNGVTSKDRLVEEAMFPWPVLDTPMMFWANYGREELSGSGNSYLNRVEAMNVERIIT 715
Query: 813 RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGREKDL 870
R + G+KPEQIGVITPYEGQRA+LVQ M ++ K Y E+E+ SVDAFQGREKD
Sbjct: 716 RLFKDGIKPEQIGVITPYEGQRAYLVQFMSINSTILDKRDQYLEVEITSVDAFQGREKDF 775
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
II+SCVR+ND Q IGFL+DPRRLNVALTRAKYG++++GNP+ L + LWN+LL ++E+
Sbjct: 776 IILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLLILGNPRALCRNKLWNHLLIHFREKG 835
Query: 931 VLVEGPLNNLKESLI 945
LV+GPL+NL+ S++
Sbjct: 836 CLVDGPLDNLQLSMV 850
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/623 (65%), Positives = 506/623 (81%), Gaps = 5/623 (0%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
D YQYQNIFGPLVK EAD DK++KE QT+E++ V WD+GLN K IAYF AK +G++RLM
Sbjct: 297 DAYQYQNIFGPLVKYEADTDKQMKEQQTKEDLVVHWDIGLNNKRIAYFMFAKDEGEIRLM 356
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
GDELKL+++ D K WS +GHVI+ P + +EV LE+++ AP EAT GFSV+F+WKS
Sbjct: 357 PGDELKLKFN-DGLKQWSSIGHVIEKPSS--EEVALEIRNGNNAPIEATHGFSVEFVWKS 413
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
T++DRMQ A+R FAVD+ SVS Y+YHRLLGH+V+ RC LP FSAP LP+LN SQV+
Sbjct: 414 TTYDRMQSAMRTFAVDETSVSGYLYHRLLGHDVEPQPIRCSLPNRFSAPGLPELNHSQVF 473
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT 571
AVK +Q+PLS+IQGPPGTGKTVTSA IVY L + VLV APSN+AVD LTEKIH+T
Sbjct: 474 AVKSVLQQPLSVIQGPPGTGKTVTSACIVYHLSRMGHGQVLVTAPSNVAVDHLTEKIHKT 533
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETGELSSADEKRY 629
GLKVVR+CAKSREAI S V L LH Q+++++ + +E +KL QLK+E GELS+ DEK+Y
Sbjct: 534 GLKVVRMCAKSREAIGSSVEQLTLHYQVQHLDTSDKAEFRKLQQLKKELGELSTQDEKKY 593
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
+ LK+ E+ LL ADVIC TCVGAGD RL +F +L+DE QATEPEC++P+ +GAK
Sbjct: 594 KQLKRATERELLMAADVICTTCVGAGDARLNGFRFTKVLVDECTQATEPECLIPIAMGAK 653
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
QL+LVGDHCQLGPVVMCKKAA+AGL QSLFER+V LG++P RL+VQYRMHP LS+FPSN
Sbjct: 654 QLVLVGDHCQLGPVVMCKKAAKAGLQQSLFERMVNLGVKPVRLQVQYRMHPILSEFPSNT 713
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEG+LQNGV ER IDFPWPV KPM+FY++ G EE++ SGTSY+NRTEASNVEK
Sbjct: 714 FYEGTLQNGVTHAERHAHAIDFPWPVASKPMMFYISTGAEELSASGTSYLNRTEASNVEK 773
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I TRF++ G+ PEQIG+ITPYEGQRA++VQ+M GSL ++Y E+EVASVDAFQGREKD
Sbjct: 774 IVTRFLKGGVVPEQIGIITPYEGQRAYIVQYMSRNGSLRKQLYNELEVASVDAFQGREKD 833
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVRSN+ + IGF+N+PRRLNVALTRA+YG++++GNPKVL+KQPLWNNLL +K+
Sbjct: 834 FIILSCVRSNEGKSIGFVNNPRRLNVALTRARYGVVILGNPKVLAKQPLWNNLLCHFKQH 893
Query: 930 KVLVEGPLNNLKESLILFSKPKQ 952
+ LVEGPLNNLK+S++ F KP +
Sbjct: 894 ECLVEGPLNNLKQSMMQFQKPHK 916
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/328 (48%), Positives = 210/328 (64%), Gaps = 18/328 (5%)
Query: 9 SSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNS 68
+SQ F + T D EF+F +F SQ +Q + D D S
Sbjct: 39 ASQDFKFFEFSHTQGTEADV---EFNFNEFAGMSQDSSQPAFSDWA----------ADGS 85
Query: 69 NLNLVSQKLHELQFEEEEDDGNEFFN--KELPPHACKYCGIHDPAYVIMCNICKKWFCNG 126
++ DGN + +ELP HAC YCGIH+P+ V+ C KWFCN
Sbjct: 86 KPSVDGDSEQPYADNRNYQDGNVGTDGSRELPAHACAYCGIHNPSCVVRCIKTGKWFCNS 145
Query: 127 RGHT-SGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVV 185
G+ SGS I+NHLVR+K KEV+LH+D PLGETVLECY CG RN+F+LGFIPAK + VVV
Sbjct: 146 SGNKFSGSCIVNHLVRSKQKEVSLHRDSPLGETVLECYNCGERNVFMLGFIPAKQEQVVV 205
Query: 186 LLCRTPCAAQNSLKDMNWDQEQWKPLI-ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKL 244
LLCR C +KD NWD W PLI +++SFL WLVK P++ EQ R R +T+ Q++KL
Sbjct: 206 LLCRQ-CVQAGGMKDSNWDLSLWLPLIDSNKSFLPWLVKPPSQFEQSRARLLTATQLSKL 264
Query: 245 EEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQT 304
EEVWK+ +A +DL++PG+D++P V +++ED YQYQNIFGPLVK EAD DK++KE QT
Sbjct: 265 EEVWKNKPDANLEDLDEPGIDDEPTPVPMQFEDAYQYQNIFGPLVKYEADTDKQMKEQQT 324
Query: 305 QENVTVRWDVGLNKKSIAYFSLAKTDGD 332
+E++ V WD+GLN K IAYF AK +G+
Sbjct: 325 KEDLVVHWDIGLNNKRIAYFMFAKDEGE 352
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/910 (48%), Positives = 595/910 (65%), Gaps = 78/910 (8%)
Query: 63 QNLDNSNLNLVSQKLH--ELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC--NI 118
QN+ NS + L+ LH +L FEE +++ ELP HAC YC H+ + V+ C
Sbjct: 150 QNI-NSQIGLMDPHLHSSQLNFEEPQEE------IELPAHACAYCATHELSTVVKCMHPS 202
Query: 119 CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPA 178
C KWFCNG+G T SHII HLV++KHKEV LH + G+T LEC+ CG +NIF+LGFI A
Sbjct: 203 CGKWFCNGKGKTKSSHIITHLVKSKHKEVALHPESSFGDTTLECFNCGCKNIFLLGFITA 262
Query: 179 KADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLI--ADRSFLSWLVKVPTEQEQQRGRQV 236
+ +SVVVLLCR PCA+ S K++NWD W+PLI +++F SWLVK P++ + +R RQ+
Sbjct: 263 RTESVVVLLCRDPCASGPS-KEVNWDMSSWQPLINGGEKAFCSWLVKTPSQVDSERSRQI 321
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
T QI +LEE WK + EAT D+E P D++
Sbjct: 322 TIQQILRLEEFWKMDPEATLLDIEAPRSDDE----------------------------- 352
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
K + TQ +AY D Y+Y+ I PL++LEA ++K L+E
Sbjct: 353 ---KPASTQ---------------LAY-------KDAYEYREIISPLIELEAKHEKELRE 387
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRY--SYDASKTWSGLGHV 414
S +Q +++ W G+NK+ A F +++D + +++ GDELKL++ S W G V
Sbjct: 388 SLSQSGISIEWSQGINKRYTATFPFSRSDLEFKVVPGDELKLQFISSTGGVIEWEDTGRV 447
Query: 415 IKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAY 474
I I D + + LE KS + + ++ +W+STS +R+ A++ FA+ +Q++S+Y
Sbjct: 448 IHIDDE--NLLSLETKSRCSFDSGPKGSYRMEMVWRSTSSERILSAMKSFAIKEQALSSY 505
Query: 475 IYHRLLGH-NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
+YH LLGH ++ LP +F NLP LN SQ+ AV + PLSLIQGPPGTGKT
Sbjct: 506 LYHALLGHPDIPPAPLDIQLPTNFHLKNLPRLNESQISAVNKVLTAPLSLIQGPPGTGKT 565
Query: 534 VTSATIVYQLVK--QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
V S+ I++ LVK + VLVC PSN+A+DQLT K+H GLKVVR+ +K RE + SPV
Sbjct: 566 VISSFIIHHLVKYVKGNDKVLVCTPSNVAIDQLTGKLHEIGLKVVRLSSKLREEVASPVE 625
Query: 592 FLALHNQIRNMEM--NSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICC 649
L LH Q+ ++ + EL KL +LKE G LS+ DEKRY L++ E ++L ADVIC
Sbjct: 626 HLTLHKQVYKLDQMGDGELGKLRKLKEAFGSLSNEDEKRYIYLRRMMEMAILRKADVICA 685
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
TCVGAGDPRL + +F ILIDES QA+EPEC++P+++GAKQ+ILVGDH QLGPV++CKK
Sbjct: 686 TCVGAGDPRLSQFRFPHILIDESTQASEPECLIPLMMGAKQVILVGDHRQLGPVLLCKKV 745
Query: 710 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
AGLSQSLFERL+ LG P RL +QYRMHP L++FPSN YEG L + + +R S+
Sbjct: 746 VDAGLSQSLFERLISLGHHPERLTIQYRMHPSLTEFPSNTSYEGQLVSELSHTDRD-SQS 804
Query: 770 DFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
FPWP P PM F+ G EEI+ SGTS++N TEAS EKI T+F+ G P QIG+ITP
Sbjct: 805 KFPWPQPKDPMFFFNCTGSEEISSSGTSFINTTEASICEKIVTKFLELGSLPGQIGIITP 864
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
YEGQRA++ HMQ G L ++Y+ IEVASVD+FQGREKD II+SCVRSND+QGIGFL D
Sbjct: 865 YEGQRAYITSHMQKSGKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQGIGFLQD 924
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSK 949
PRRLNVALTRA++G+I++GN KVLSK PLWN+L++ +K + VLVEG L NLK+S ++ K
Sbjct: 925 PRRLNVALTRARFGLIILGNAKVLSKDPLWNSLISHFKNKNVLVEGSLANLKQSPVILQK 984
Query: 950 PKQYFKKNNM 959
PK+ + + +
Sbjct: 985 PKKLYGQGKL 994
>gi|412990683|emb|CCO18055.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 1020
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/878 (50%), Positives = 572/878 (65%), Gaps = 81/878 (9%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGR-GHTSGSHIINHLVRAKHKEVTLHKDGP 154
E P HAC YCGI +PA V+ C KWFCN + G S ++ HLV+++ + LH D P
Sbjct: 88 EQPAHACSYCGISNPACVVRCKKTNKWFCNSKTGALPASCVVFHLVKSRSNAIALHPDSP 147
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADS--VVVLLCR----TPCAAQNSLKDMNWDQEQW 208
LGE CY N+F LGFI K + V LL R P AA LK ++ D +W
Sbjct: 148 LGELEPACYVTDSTNVFNLGFIVKKDEDPPTVALLSRDVVLQPTAA---LKALDLDLTKW 204
Query: 209 KPLIA-DRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDED 267
+P++ D++ LSWLV P E+E R RQVT AQ LE++WK + AT D+EK D +
Sbjct: 205 EPVVTEDKTILSWLVNEPDERETMRARQVTQAQATALEDLWKSDPTATIDDVEKRDKDAE 264
Query: 268 PHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 327
P + V +R+
Sbjct: 265 P-------------------------------------QPVALRY--------------- 272
Query: 328 KTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 387
D YQYQN+FGPL+ +EADYDK KESQ NV+VRWDVGLN + + YF + +
Sbjct: 273 ---ADAYQYQNVFGPLIAIEADYDKSQKESQHMGNVSVRWDVGLNARRVMYFGFSSDEEH 329
Query: 388 MRLMQGDEL-KLRYSYDASKTWSGLGHVIKIPDNFGDEVGLEL--KSSAGAPTEATTGFS 444
++++ GDEL + S D + W G G VI+ + +E+GLEL +S AP T+G+
Sbjct: 330 LKILLGDELVAILKSVDGREIWRGDGTVIRY-NVKEEEIGLELDARSCVDAPVHVTSGYE 388
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR-------CHLPKHF 497
++ +WKS S+DR Q AL+ FAVDD SVS YIYH+LLGH+V+E + + +
Sbjct: 389 IECVWKSVSYDRCQAALKAFAVDDTSVSGYIYHKLLGHDVNESVMHHRGSNIDVSGKQKW 448
Query: 498 SAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
SAPNLP+LN SQ+ AVK +Q+PLSLIQGPPGTGKTVTSATIVY L + V+V APS
Sbjct: 449 SAPNLPELNHSQIAAVKMVLQQPLSLIQGPPGTGKTVTSATIVYHLATKGDGQVIVAAPS 508
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNM---EMNSELKKLLQL 614
N+AVDQL EKI +TGLKVVR+ A+SRE ++S V LALH Q++ + E N +L KL +L
Sbjct: 509 NVAVDQLAEKIEKTGLKVVRIVARSREHVNSAVEHLALHYQVQRIAEKEKNGQLAKLQRL 568
Query: 615 KEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
K+ GELS DEKRY K E ++ NADV+C T VGAGD RL K +F +L DES Q
Sbjct: 569 KDSIGELSQEDEKRYYKALKKIENDIIQNADVVCVTAVGAGDRRLEKYRFRQVLFDESTQ 628
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEV 734
ATEPE ++P+I+GAKQ+++VGDHCQLGPVV C+ A+RAGLSQSLFERL+ +G++P RL+V
Sbjct: 629 ATEPETLIPIIMGAKQVVMVGDHCQLGPVVTCRSASRAGLSQSLFERLIFMGVQPIRLQV 688
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
QYRMHP LS+FPSN FYEG+LQNGV ER S+ FPWP P KPMLF+ G EE++ S
Sbjct: 689 QYRMHPCLSEFPSNAFYEGTLQNGVTEAERADSEDVFPWPCPSKPMLFWAQMGVEEMSAS 748
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
G SY+NR EA VEKI T ++ G+ PE+IGV+TPYEGQRA++V ++ G L IYQE
Sbjct: 749 GYSYLNRGEAYAVEKIVTHLLQNGIAPEEIGVVTPYEGQRAYVVNYLTRTGVLHPSIYQE 808
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
+EVASVDAFQGREK II++CVRSND QGIGFLNDPRRLNVALTRAK G++++GNPKVL+
Sbjct: 809 VEVASVDAFQGREKQYIIVTCVRSNDRQGIGFLNDPRRLNVALTRAKLGLMIVGNPKVLA 868
Query: 915 KQPLWNNLLNFYKEQKVLVEG-PLNNLKESLILFSKPK 951
KQPL+ ++L +++ K LVEG +N L E ++ + +
Sbjct: 869 KQPLFRDMLQHFRDNKCLVEGNNINQLNECMVALPQSR 906
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/822 (52%), Positives = 564/822 (68%), Gaps = 84/822 (10%)
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LG ++LECY CG N+FVLGFIP+K DSVVVL+CR PC N+LKD WD W+PLI +
Sbjct: 152 LGASLLECYVCGNTNVFVLGFIPSKTDSVVVLICREPCLGSNTLKDDEWDISMWQPLIEE 211
Query: 215 RSFLSWLVKVPT-EQEQQRGRQVTSAQIAKLEEVWKDNAE-ATFQDLEKPGVDEDPHQVL 272
R+FL WLVK+PT E+E + R +T++QI +LEE+W++ E AT DL KPG ++
Sbjct: 212 RAFLPWLVKIPTPEEEVKYTRPITNSQINRLEELWREGKESATVVDLAKPGTAAAEEEL- 270
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
P+V+ T D
Sbjct: 271 --------------PVVR-------------------------------------NTYPD 279
Query: 333 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD--GDMRL 390
Y YQN FGPLV++EA YDK +KESQ + ++ +RWD+ + + AYF + + +L
Sbjct: 280 AYVYQNTFGPLVEMEAVYDKEVKESQAKHDIKLRWDLNMGNRRCAYFPVFTREETAGAKL 339
Query: 391 MQGDELKLRYSYDAS--KTWSGLGHVIKIPDNFGDEVGLELK---SSAGAPTEATTGFSV 445
+ GDE++L+ + S + W G+GHV K+ + +EV +EL+ S P + T+G++V
Sbjct: 340 VPGDEIRLKLADWGSDNEGWIGVGHVTKLMQS-SEEVCVELRPQYSHQKGPWDITSGYTV 398
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCH-LPKHFSAPNLP 503
+F+WK+TSFDRMQ AL+ FAVDD SVS IYH LLG ++ R H PK+++APNLP
Sbjct: 399 EFVWKATSFDRMQNALKAFAVDDTSVSGVIYHMLLGQAIETNTTIRIHNPPKNWTAPNLP 458
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQV AV+ A+++PLSLIQGPPGTGKTVTSATI+Y L +Q VLV APSNIAVDQ
Sbjct: 459 QLNHSQVQAVQKALEQPLSLIQGPPGTGKTVTSATIIYHLARQHQGQVLVTAPSNIAVDQ 518
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM--NSELKKLLQLKEETGEL 621
L EKIH TGLKVVR+ AKSRE + SPV FL+LH QIRNM E KKL LKEE GEL
Sbjct: 519 LAEKIHLTGLKVVRILAKSRECLYSPVEFLSLHTQIRNMRTPQAKEFKKLFDLKEEVGEL 578
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
+S+DEKR+R+L+ E+ LL+NADVIC TC GAGDPRL K++F +L+DE+ QA EPE +
Sbjct: 579 TSSDEKRFRILRSQVERELLENADVICTTCAGAGDPRLGKLRFKMVLVDEATQACEPEAL 638
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPE 741
+P+ GAKQ+ILVGDH QLGPVVMCKKAA+AG QSLFERL+ LG+RP RLEVQYRMHP
Sbjct: 639 IPICNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIRLEVQYRMHPS 698
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
L++FPS FY+G LQNG+ ++R++S + FPWP + PM FY + GQEEI+ SGTSY+NR
Sbjct: 699 LAEFPSQTFYDGCLQNGITMEDRQVSGVKFPWPREEMPMFFYNSTGQEEISASGTSYLNR 758
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
+EA N+EKI T F+R G+K QIGV+TPYEGQRA++ Q +Q Q +L AK+Y+ IE+ASVD
Sbjct: 759 SEAINIEKIITYFLRAGLKGSQIGVVTPYEGQRAYIQQVLQRQTTLSAKMYESIEIASVD 818
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ----- 916
AFQGREKD I++SCVRSN G+GFLNDPRRLNVALTRA+YG+++ GN +VL++
Sbjct: 819 AFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQVLARATTVGH 878
Query: 917 -------------PLWNNLLNFYKEQKVLVEGPLNNLKESLI 945
+WN LL+ K+ ++VEGPL+ L++S +
Sbjct: 879 QGRGRMTVIRSMPSVWNGLLSHMKKFDLIVEGPLSALRQSHV 920
>gi|255713384|ref|XP_002552974.1| KLTH0D05786p [Lachancea thermotolerans]
gi|238934354|emb|CAR22536.1| KLTH0D05786p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/875 (49%), Positives = 591/875 (67%), Gaps = 73/875 (8%)
Query: 84 EEEDDGNEFFNKELPPH--ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVR 141
E ED G E PP AC YC + V+ CN C KWFCN + TS SHIINHLV
Sbjct: 51 ENEDFGEPM---EAPPSEFACAYCNVDSAKCVVKCNTCNKWFCNSKNGTSSSHIINHLVL 107
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
+ H V+LH + LG+TVLECY CG +N+FVLGF+ AK+++VVV+LCR PCA K +
Sbjct: 108 SHHNTVSLHPESDLGDTVLECYNCGCKNVFVLGFVSAKSEAVVVILCRLPCA---QTKTV 164
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK 261
+WD +QW+ LI + RQ S W
Sbjct: 165 SWDTDQWQSLIEN-------------------RQFLS---------W------------- 183
Query: 262 PGVDEDPH-QVLLRYEDGYQYQNIFGP--LVKLEADYDKRLKESQTQENVTVRWDVGLNK 318
V EDP + LLR + P + KLEA + R + T ++ +V K
Sbjct: 184 --VAEDPSDEELLR-------ARMISPSQISKLEAKW--RSNKDATINDI----EVPDEK 228
Query: 319 KSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAY 378
+ + + + D YQYQ F PLVK+EADYDK+LKESQ E+++V W +GL+ + +A
Sbjct: 229 EEVPHILMRY--ADAYQYQRSFAPLVKIEADYDKQLKESQALEHISVSWSLGLSNRHLAS 286
Query: 379 FSLAKTDGD-MRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAP 436
F+L+ + + +++ GDE+ LRYS W G G+++++P++F D++ LELK S P
Sbjct: 287 FALSTFESNGLKVAVGDEMILRYSGVQHPEWEGHGYIVRLPNSFQDQLTLELKPSKTPPP 346
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH 496
T TGF+ +F+WK TS+DRMQ A++KFAV +SVS ++Y+++LGH V ++ F +LP+
Sbjct: 347 TSFNTGFTAEFVWKGTSYDRMQEAMKKFAVVKKSVSGFLYYKILGHEVPDLEFDVNLPEQ 406
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
FS P+ LN SQ A++H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAP
Sbjct: 407 FSIPHFTQLNVSQANAIRHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKLHKERILVCAP 466
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
SN+AVD L K+ GLKVVR+ AKSRE ++S VS L LHN + + ELKKLL+LKE
Sbjct: 467 SNVAVDHLAAKLRDLGLKVVRLTAKSREDVESSVSNLGLHNLV-SRSAKGELKKLLKLKE 525
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
+ GELS +D K++ + +E +L ADV+CCTCVGAGD RL + KF ++LIDES QA+
Sbjct: 526 DVGELSPSDAKKFVKQVRKSELEILKKADVVCCTCVGAGDKRL-EAKFRTVLIDESTQAS 584
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQY 736
EPEC++P++ GAKQ++LVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQY
Sbjct: 585 EPECLIPIVKGAKQVVLVGDHQQLGPVILDRKAADAGLKQSLFERLISLGHIPIRLEVQY 644
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGT 796
RM+P LS+FPSN FYEGSLQNGV ++R ++ FPWP+ D PM+F+ G+EEI+G+GT
Sbjct: 645 RMNPHLSEFPSNMFYEGSLQNGVTIEQRSVTNSTFPWPIHDLPMMFWSNYGREEISGNGT 704
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
SY+NR EA N E++ T+ + G+KP+QIGVITPYEGQRA++VQ+MQ GS+ ++Y +E
Sbjct: 705 SYLNRIEAMNCERVITKLFKDGVKPDQIGVITPYEGQRAYIVQYMQMNGSMDKELYMNVE 764
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
VASVDAFQGREKD II+SCVR+N+ Q IGFL+DPRRLNVALTR+KYG++++GNP+ LS+
Sbjct: 765 VASVDAFQGREKDYIILSCVRANEQQAIGFLSDPRRLNVALTRSKYGLVILGNPRSLSRN 824
Query: 917 PLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
LW++LL +++E+ LVEG L NL+ + +K +
Sbjct: 825 SLWSHLLVYFREKGCLVEGALGNLQLCTVQLTKSR 859
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/620 (64%), Positives = 496/620 (80%), Gaps = 5/620 (0%)
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL--AKTDGDMRLMQ 392
QYQ F PLV++EA YD+++KES ENV VRW+ LN+K +AYF + A ++R+M
Sbjct: 137 QYQMTFKPLVEIEAAYDQKVKESLKLENVVVRWETALNRKHVAYFRIPGANEGPELRIMH 196
Query: 393 GDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKST 452
GDEL +R WSG+GHVIKIPDNF DEVGLE+K + P++ T + V+F WKST
Sbjct: 197 GDELIIRRFNTPDSNWSGVGHVIKIPDNFSDEVGLEMKQADVVPSDPVT-YMVEFKWKST 255
Query: 453 SFDRMQLALRKFAVDD-QSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
FDRM A+ K + + YI++RLLGH +D+++ +C+LPK +SAP+LP+LN SQV+
Sbjct: 256 PFDRMIQAISKVTEEQCDLLPPYIFYRLLGHEMDDMVLKCNLPKRYSAPDLPELNHSQVF 315
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT 571
AVK +QRPLSLIQGPPGTGKTVTSA+IVY L K VLV APSN AVDQL EKI RT
Sbjct: 316 AVKTVLQRPLSLIQGPPGTGKTVTSASIVYHLNKIHQKKVLVVAPSNTAVDQLCEKISRT 375
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM 631
GLKVVR+CA+SREA+ SPVS L LH Q ++++ +SEL+KL QLK+ETGELS ADEKRYR+
Sbjct: 376 GLKVVRLCARSREALASPVSHLMLHVQAQHVKGHSELRKLQQLKDETGELSQADEKRYRL 435
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
LK+ E+ LL ADV+CCTCV AGD RL ++ FHS+LIDES QATEPEC++P+++G +Q+
Sbjct: 436 LKRELERELLVAADVVCCTCVTAGDQRLERLSFHSVLIDESTQATEPECLIPLMVGCRQV 495
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
+LVGDHCQLGPV+ CKKAA AGL+QSLFER V+LGIRP RL+VQYRMHP LS FPSN FY
Sbjct: 496 VLVGDHCQLGPVITCKKAANAGLTQSLFERFVLLGIRPMRLQVQYRMHPALSAFPSNVFY 555
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EGSLQNGV A++R +IDFPWP PD+PM FY T GQEEI+G+G SY+NRTEA+ VEKI
Sbjct: 556 EGSLQNGVTAEDR-CKQIDFPWPNPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIV 614
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T+ ++ G+ P IGVITPYEGQRA+L ++ Y GSL +K+YQEIE+ASVDAFQGREKD I
Sbjct: 615 TKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLNSKLYQEIEIASVDAFQGREKDYI 674
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
I+SCVR+N++QGIGFLNDPRRLNVALTRA+YG+IV+GNPK L KQPLWN LL+FY+EQ +
Sbjct: 675 ILSCVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYREQHL 734
Query: 932 LVEGPLNNLKESLILFSKPK 951
LVEGPLNNL E ++ F KPK
Sbjct: 735 LVEGPLNNLAEYMLQFPKPK 754
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 67 NSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNG 126
N+ +N + Q++ +L +DD + N +LP HAC YCGIHDPA V+ CN KKWFCNG
Sbjct: 68 NNRINSLGQQILDL---TTKDDDQDEANSQLPEHACAYCGIHDPACVVYCNTTKKWFCNG 124
Query: 127 RGHTSGSH 134
RG+TSG +
Sbjct: 125 RGNTSGRY 132
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/858 (49%), Positives = 566/858 (65%), Gaps = 62/858 (7%)
Query: 99 PHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGET 158
P AC YCGI +P ++ CN C+KWFCNG+ +GSHII H V +KH+ ++LH D LG+T
Sbjct: 15 PDACAYCGISEPDSLVKCNTCEKWFCNGKTSGAGSHIITHTVLSKHQSLSLHPDSELGDT 74
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFL 218
+LECY CG RNIFVLGF+ AK DSVVV+LCR PCA K++ W+ W+ LI DR+ L
Sbjct: 75 MLECYNCGNRNIFVLGFVSAKTDSVVVILCRLPCAQS---KNVEWNTANWQSLIEDRALL 131
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
W+ K P+E+E+ + +TS QI KLE WK + +AT D+E+ ++E+ +L+RY D
Sbjct: 132 PWVAKPPSEEEKLEAQPITSLQITKLETKWKQDKDATLGDMEEAEMEEELEPILMRYSDA 191
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
+QYQ F PLV+ EA+YDK+LK+SQ+ E +TV W +G N +A F+L
Sbjct: 192 FQYQRSFAPLVQYEANYDKQLKQSQSLERLTVTWSLGTNDLHLATFAL------------ 239
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
Q+ + + ++ VG D++ L
Sbjct: 240 -------------------QSYDTLGMKLAVG-----------------------DQMIL 257
Query: 399 RYS-YDASKTWSGLGHVIKIPDNFGDEVGLELKSS--AGAPTEATTGFSVDFIWKSTSFD 455
RY+ + ++ W G +++IP + LEL S PT TGF+ + +WK TS+
Sbjct: 258 RYNGSELAEPWEQSGFIVRIPSATRETFTLELIDSKNKSVPTHLHTGFTAELVWKGTSYA 317
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
RMQ AL+K AV+ +SVS +IY+ L+G + + FR K +S PN LN SQ A+ +
Sbjct: 318 RMQDALKKLAVNKKSVSEHIYYALMGIDAPSIEFRVKKKKSYSIPNFAKLNASQENAIHN 377
Query: 516 AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKV 575
+ +PLSLIQGPPGTGKTVTSATIVYQL K +LVCAPSNIAVD L K+ + GL+V
Sbjct: 378 VLSKPLSLIQGPPGTGKTVTSATIVYQLTKLHKGQILVCAPSNIAVDHLASKLEQLGLRV 437
Query: 576 VRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKN 635
+R+ AKSRE ++S V L+L Q+R + +LK+LL LKE+ GELS++ K+ L
Sbjct: 438 LRLIAKSREDVESSVQHLSLTEQMRK-HASKDLKRLLALKEKNGELSASQYKQMASLLYK 496
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
E L+D VICCTCVGAGD RL K KF ++LIDES QA+EPEC++P++ GA Q+ILVG
Sbjct: 497 EEALLMDKCQVICCTCVGAGDRRLAKRKFRTVLIDESTQASEPECLIPIVKGANQVILVG 556
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSL 755
DH QLGPV++ +KA AGL QSLFERL+ LG P RLEVQYRMHP LS+F SN FY+GSL
Sbjct: 557 DHQQLGPVILSRKAGDAGLRQSLFERLIYLGHMPIRLEVQYRMHPCLSEFSSNVFYDGSL 616
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI 815
QNGV A+ R FPWP+ + PM+F+ G+EE++ SGTSY+NRTEA N EKI TR +
Sbjct: 617 QNGVTAESRSRPDSTFPWPIREIPMMFWAVFGREELSASGTSYLNRTEAMNCEKIITRLL 676
Query: 816 RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI-YQEIEVASVDAFQGREKDLIIMS 874
+ G+ P +IGVITPY GQ F+VQ+M+ G + K Y E+EVASVD+FQGREKD II+S
Sbjct: 677 KEGVDPGKIGVITPYAGQATFIVQYMEMNGLIADKSRYSEVEVASVDSFQGREKDYIILS 736
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
CVR+ND+Q IGFL+DPRRLNVALTRA++G+ ++GNPK LSK P+WN LL ++E+ LV+
Sbjct: 737 CVRANDNQLIGFLSDPRRLNVALTRARFGMAILGNPKTLSKNPMWNRLLMHFREKGCLVD 796
Query: 935 GPLNNLKESLILFSKPKQ 952
G L NLK I S+ Q
Sbjct: 797 GSLENLKLCNIPLSRGGQ 814
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/895 (47%), Positives = 570/895 (63%), Gaps = 82/895 (9%)
Query: 85 EEDDGNEFF---NKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHT-SGSHIINHLV 140
E D+G+ K P HAC YCG PA V+ C KWFCNG+G + + SHI+ HLV
Sbjct: 41 EYDNGDNIVIGGGKARPAHACVYCGESSPASVVRCLTTNKWFCNGKGGSLNSSHIVAHLV 100
Query: 141 RAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKD 200
++++K V LH D +G VLECY CG N+FVLGF+ AK ++VVVLLCR Q S D
Sbjct: 101 KSRNKTVALHPDSEVGSDVLECYNCGNENVFVLGFVTAKLENVVVLLCRH--CIQRSPSD 158
Query: 201 MNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA-----EAT 255
NWD +W+ LI DR FL WLV +P E +VT A + K EE WK N EA
Sbjct: 159 ANWDIREWQTLIEDRQFLPWLVPIPRRSES----RVTMADVIKAEEAWKTNPSLSWEEAL 214
Query: 256 FQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVG 315
+ E+ +E+ +V YED Y+YQ +GPLVK+EADYDK +KESQ Q +TV W+
Sbjct: 215 LGNQEEQDEEEEIAEVKATYEDAYEYQRTYGPLVKIEADYDKNMKESQRQSGLTVSWNRA 274
Query: 316 LNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKS 375
LN + F Y N++ T +TV
Sbjct: 275 LNNNYLCTF-----------YLNLY----------------DLTGTKITV---------- 297
Query: 376 IAYFSLAKTDGDMRLMQGDELKLRYSYDASKT---WSGLGHVIKIPDNFGDEVGLELKSS 432
GDE+KL + S + WSG G V+K PDNF +EV LE++
Sbjct: 298 -----------------GDEVKLYFEGSESSSTPRWSGTGIVVKTPDNFSEEVTLEIRKG 340
Query: 433 AGA---PTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF 489
PT + F+++F+W ++ RMQ AL+ FA DD SVS YIYH LLGH++ E
Sbjct: 341 GDEKQIPTGESHPFALEFVWNDITYRRMQQALKLFATDDYSVSGYIYHNLLGHDIPETFL 400
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---- 545
LP+ FS +LN SQV AVK ++RP SLIQGPPGTGKTV S TI+Y L
Sbjct: 401 DVPLPEQFSISGFNELNVSQVNAVKQVLRRPFSLIQGPPGTGKTVVSTTIIYHLANIRRQ 460
Query: 546 --QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNME 603
+ GS +LVCAPSN+AVDQL E+I TG+ V+R+ A+SRE++ S V L + + +R+ +
Sbjct: 461 NPEKGSKILVCAPSNVAVDQLAERIASTGIDVLRLTARSRESMSSSVEHLTIQHALRHGD 520
Query: 604 MN-SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
+ L+KL +LK+E GE S+ADEK + L+K A ++++ A+VICCTC AG+ +L +
Sbjct: 521 HGFTRLQKLFELKDELGEFSAADEKEFAKLEKKASEAIIRKAEVICCTCSTAGNFKLQNL 580
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
F ++LIDE QA+EPEC++P++ G KQ++ VGDH QLGPV++ KAA AGL++SLFERL
Sbjct: 581 TFSAVLIDEVTQASEPECLIPLVHGCKQVVFVGDHQQLGPVILNSKAANAGLNKSLFERL 640
Query: 723 VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
+++G P RL VQYRMHP LS+FPSN FYEGSLQNGV R L +DFPWP P PMLF
Sbjct: 641 ILIGHVPIRLMVQYRMHPSLSEFPSNMFYEGSLQNGVTTASRVLKYVDFPWPQPQHPMLF 700
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
+ GQEEI+ SGTS++NRTEA+N E+I TR +CG+ P+QIGV+TPYEGQRA++ Q+M
Sbjct: 701 WSNLGQEEISASGTSFLNRTEAANCERIVTRLFKCGVAPDQIGVVTPYEGQRAYVTQYMV 760
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
GS+ +Y+ +EV SVDAFQGREKD II++CVRS+ GIGFL+DPRRLNVALTRAKY
Sbjct: 761 SSGSVDEAMYKGVEVQSVDAFQGREKDFIILTCVRSSKTGGIGFLSDPRRLNVALTRAKY 820
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
G+I++GNP VL++ PLW +L+ +++ ++ LVEGPL+ L+ I KP+ + N
Sbjct: 821 GLIILGNPHVLARHPLWLHLITYFRSKRCLVEGPLSALQPCNIQLPKPRPWRGNN 875
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/968 (45%), Positives = 584/968 (60%), Gaps = 169/968 (17%)
Query: 89 GNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVT 148
N+ N+EL + C+YC I V+ CN C++WFCNG T GSHI+ HLVR+KHKE+
Sbjct: 226 NNDSENEELKYYRCRYCEIDYVDSVVQCNTCERWFCNGSYGTCGSHIVTHLVRSKHKEIK 285
Query: 149 LHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAA-------------- 194
LHK+ LGET+LECY CG RN+F+LGF+P + VV++LCR PC A
Sbjct: 286 LHKNSVLGETILECYNCGCRNVFLLGFLPTLEEGVVIILCRDPCLAYYISINDKNGKNGK 345
Query: 195 -----------------QNSLKDMNWDQ--------------------EQWKPLIADRSF 217
+N D N + E W+P+I DR F
Sbjct: 346 NDKNCKNEKNEKNCKNDKNCKNDKNMKRDIPIQDEESEGESKIKECNLENWQPVIEDRCF 405
Query: 218 LSWLVKVPTEQE-QQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
L WLV +P + + +++G+ TS + KLEE WK+ + +L+
Sbjct: 406 LEWLVNIPRKDDAEKKGKLTTSVNVNKLEEFWKNKKDVYINELD---------------- 449
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQY 336
+K+ D K++K T D Y
Sbjct: 450 ------------LKILDDEPKKVKLKYT---------------------------DAIDY 470
Query: 337 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDEL 396
+ F PL++LE++YDK +KE Q NVT+RWDVGLNKK AYF K + ++R++ GDEL
Sbjct: 471 KLTFSPLIELESNYDKSIKEGHKQTNVTIRWDVGLNKKRYAYFVYIKEESELRIVVGDEL 530
Query: 397 KLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK--SSAGAP--TEATTGFSVDFIWKST 452
K+ Y+Y W GH+ ++ N +E+ LELK + P TGF V+F+WKST
Sbjct: 531 KISYTYPNGNIWGCEGHISRLNSN--EEIALELKVLYNIDGPWNYNINTGFVVEFVWKST 588
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV-DE------------------------V 487
++DRMQLAL +FA + S+S Y+YH+LLGH++ DE
Sbjct: 589 AYDRMQLALNEFAFNSFSLSGYLYHKLLGHDIIDEPIDYNKKEFNLNNDNKKYNKKLNDN 648
Query: 488 LFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK-Q 546
L+ + ++SAPNL LN SQ+ A+K ++ PLSLIQGPPGTGKT+T AT+VY + K +
Sbjct: 649 LYTSYKIVNYSAPNLAPLNHSQIDAIKKSLNSPLSLIQGPPGTGKTLTCATLVYHMHKTK 708
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR--NMEM 604
G VLV APSN+AVDQL+ +IHRTGLKVVR+CA+SRE++ S +L LHNQ++ ++
Sbjct: 709 MGGKVLVTAPSNVAVDQLSVRIHRTGLKVVRLCARSRESVSSIADYLYLHNQVKLLKTDV 768
Query: 605 NSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF 664
EL KLL+LKEE GELS DE R + L +AE +L ADVIC TCVGA D RL + +F
Sbjct: 769 GEELNKLLELKEEVGELSQKDENRLKKLILHAEYKILTEADVICTTCVGAMDKRLKRFRF 828
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
+ +LIDE+ Q+TEPEC+VP++ GAKQ++LVGDHCQLGP+++CKKAA +GL +SLFERLV+
Sbjct: 829 NQVLIDEATQSTEPECLVPIVTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERLVM 888
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
LGI PFRLEVQYRMHP LS+FPS FY+G LQNG+ ER+ +FPWP PM FY
Sbjct: 889 LGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFFYN 948
Query: 785 TQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLV----QH 840
+ G EE++ SGTSY+NR EA N+E + + G+K QIGVITPYEGQRA++ ++
Sbjct: 949 SNGLEEMSASGTSYLNRNEAQNMEVLVRALLNAGLKATQIGVITPYEGQRAYITSLFQKN 1008
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
+ YQ L +IEVASVDAFQGREKD I++SCVRSN GIGFLNDPRRLNVALTRA
Sbjct: 1009 ISYQHCL------DIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRA 1062
Query: 901 KYGIIVIGNPKVLSKQ------------------PLWNNLLNFYKEQKVLVEGPLNNLKE 942
KYG+I+ GN KVLS+Q +W NLLN +K++ ++VEG L+NLK
Sbjct: 1063 KYGLIICGNAKVLSRQHFISKEKINSNETITNVNSVWVNLLNQFKKKNLIVEGCLSNLKP 1122
Query: 943 SLILFSKP 950
I P
Sbjct: 1123 ITINIPTP 1130
>gi|401402591|ref|XP_003881287.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
gi|325115699|emb|CBZ51254.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
Length = 1428
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/1001 (43%), Positives = 591/1001 (59%), Gaps = 192/1001 (19%)
Query: 86 EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNG----RGHTSGSHIINHLVR 141
E D E K++P HAC YCG P V+ C C K+FCN G + GSHII HLV+
Sbjct: 188 ELDRGEKTTKDVPEHACSYCGASSPECVLKCCCCNKYFCNSPCSVSGSSMGSHIIFHLVK 247
Query: 142 AKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDM 201
++H+EV LH +GPLG+ LEC+ CG RN+F+LG IPA+ + VVVL+CR PC + ++LK
Sbjct: 248 SRHREVMLHPEGPLGDCTLECFQCGSRNVFLLGLIPAEQEGVVVLICREPCLSSSALKQS 307
Query: 202 NWDQEQWKPLIADRSFLSWLVK-VPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLE 260
WD QW+PLI +SFL WLV+ T E++ VT+ Q+ +LEE+W+ N +AT ++L
Sbjct: 308 GWDLSQWQPLIEGKSFLPWLVRPTLTADERRDCHVVTTQQLQRLEELWQKNPQATLEEL- 366
Query: 261 KPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKS 320
SQT+E + L
Sbjct: 367 -----------------------------------------SQTKE------EAPLPSVK 379
Query: 321 IAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFS 380
+ Y DG+ YQ F PLV+ EAD+DK++K+ Q V +RW+ GLN++ +AYF
Sbjct: 380 LVY-------EDGFDYQRTFAPLVQAEADFDKQMKDGQKLVRVKLRWEQGLNRRRLAYFM 432
Query: 381 LAKTDG-DMRLMQGDELKLR----------------------------YSYDASKT---- 407
A+ +G ++R+ GDE+K+ + +DA+
Sbjct: 433 YARDEGCNVRVAAGDEVKISTMLPKSVLAASSAPATSSGAGSQGSGGAHGHDATSPNGTS 492
Query: 408 ----------------WSGLGHVIKIPDNFGDEVGLELKSSA---GA-PTEATTGFSVDF 447
WS G + + ++ +EV +E+K GA + ++++F
Sbjct: 493 DGGARGGLEGDANLVEWSCTGSITRFSED-SEEVIVEVKKPPNVKGAWDSPVPLLYTIEF 551
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+WKSTSF+RMQ ALR+ AVD+ SVS+Y+YH L+G ++ + + +P SAPNL LN
Sbjct: 552 VWKSTSFERMQAALRQLAVDEISVSSYLYHTLMGKQMEHQIIQTPMPLQISAPNLAPLNP 611
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK-----------------QTGSP 550
SQ+ A+++A+Q PLSLIQGPPGTGKT+TS+T+VYQ+VK + G
Sbjct: 612 SQMLAIRYALQHPLSLIQGPPGTGKTLTSSTLVYQMVKLSEMGSHVHPRGTGGFNKDGGQ 671
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSRE-AIDSPVSF----LALHNQIRNMEM- 604
VLV APSN+AVDQL E+I+RTGLKV+R+ +KSRE A S SF LALH ++ ++
Sbjct: 672 VLVVAPSNVAVDQLAERINRTGLKVIRMYSKSREGAASSLTSFCMEHLALHKKVLELKTA 731
Query: 605 -NSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ E+ K LQLKE+TGEL++ADE+R R+L AE +L ADVIC TCVGAGD RL +
Sbjct: 732 GSDEMAKYLQLKEQTGELAAADERRLRLLISRAEMEILQTADVICTTCVGAGDNRLQGFR 791
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QATEPEC++P++LGAKQ++L+GDHCQLGPVV+ KKAA AGL+ SLF RL+
Sbjct: 792 FRQVVIDEAAQATEPECLIPIVLGAKQVVLIGDHCQLGPVVLSKKAAAAGLATSLFSRLL 851
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL-----SKIDFPWPVPDK 778
LG RP RL+VQYRMHP LS FPS FFYEG LQNGV ER + FPWP ++
Sbjct: 852 ALGHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHRGPGEHRFPWPSEER 911
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLV 838
PM FY + EEI+GSGTSYVNR EASN+EKI T ++CG+K QIGVITPY+GQRA +
Sbjct: 912 PMFFYHSTASEEISGSGTSYVNRVEASNIEKIVTFLLKCGLKASQIGVITPYDGQRAHIS 971
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
Q Q +L + ++EVASVDAFQGREKD I++SCVRSN + GIGFL D RRLNVA+T
Sbjct: 972 SLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRRLNVAMT 1031
Query: 899 RAKYGIIVIGNPKVLS-------------------------------------------- 914
RAKYG+I+ GN VL+
Sbjct: 1032 RAKYGLIICGNASVLANYMPRVARPPAGSASLQGSGAAGATSNALGPGGVAVGPGAAALP 1091
Query: 915 -----KQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
+ P+W L++ Y + ++V+GPL+NLK S I + P
Sbjct: 1092 GTFVPEPPIWRLLIHHYLKYDLVVDGPLSNLKPSKIRITLP 1132
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/631 (59%), Positives = 484/631 (76%), Gaps = 12/631 (1%)
Query: 331 GDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRL 390
D YQYQN+FGPL+K+EAD+D+ KESQ+++ + VRWDVGLNK+ +AYFS + RL
Sbjct: 184 ADAYQYQNVFGPLLKIEADHDRAQKESQSKDGLRVRWDVGLNKRRLAYFSFPADEEIARL 243
Query: 391 MQGDELKLRYS-YDASK------TWSGLGHVIKIPDNFGDEVGLELKSSAG-APTEATTG 442
+ GD L+LR++ Y A K TWS G V+K D +EV LEL+S +G AP E T G
Sbjct: 244 VVGDALRLRHAAYPAGKDQSGGATWSAEGVVLKFTDR--EEVVLELRSGSGDAPVEETNG 301
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
FSVDF+W S SFDR Q A++ FA+D+ SVS YIYH LLGH+V+ LPK SAPNL
Sbjct: 302 FSVDFLWNSISFDRAQAAMKAFALDETSVSGYIYHLLLGHDVEPKPLAVTLPKKLSAPNL 361
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
P LN SQ A + +QRPLSLIQGPPGTGKTVTSATIVYQL +Q V+VCAPSN+AVD
Sbjct: 362 PPLNHSQESAARAVLQRPLSLIQGPPGTGKTVTSATIVYQLAQQHLGQVIVCAPSNVAVD 421
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM--NSELKKLLQLKEETGE 620
QL EKI RTGL+VVR+ A+SRE + SPV L LH Q+ +++ +E KKL QLK+E GE
Sbjct: 422 QLAEKIERTGLRVVRLAARSREHVASPVEHLTLHYQVAHLDSPETAEFKKLQQLKDELGE 481
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LSS DE+R++ LK+ E+ ++ ADV+C T VGAGDPRL +F +L+DES QATEPEC
Sbjct: 482 LSSNDERRHKRLKRKIEREIIAAADVVCVTAVGAGDPRLADFRFRQVLMDESTQATEPEC 541
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
++P+I+GAKQ+++VGDHCQLGPVV KKAARAGL QS+FERL+ LG++P RL+VQYRMHP
Sbjct: 542 LIPLIMGAKQVVMVGDHCQLGPVVTSKKAARAGLGQSMFERLISLGVQPIRLQVQYRMHP 601
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEG+LQNGV A +R L+ +DFPWP P PM+F+ G EEI+ SGTSY+N
Sbjct: 602 CLSEFPSNAFYEGALQNGVAAADRLLTHVDFPWPNPTSPMMFWSMTGAEEISASGTSYLN 661
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
R EA+ VEK+ T +R G+ P +IGV+TPYEGQRA++ QHM G L ++Y E+EVASV
Sbjct: 662 RAEAAGVEKVVTHLLRAGVDPGRIGVVTPYEGQRAYVSQHMTRAGVLATRLYGEVEVASV 721
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSN+ GIGFLNDPRRLNVA+TRA+ G++++GNPKVLS+Q L++
Sbjct: 722 DAFQGREKDFIILSCVRSNEKTGIGFLNDPRRLNVAMTRARSGLVILGNPKVLSRQRLFH 781
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
+LLN ++++ LVEG L++L++S + S+PK
Sbjct: 782 DLLNHFRDEGCLVEGALDSLRQSAVALSRPK 812
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/234 (54%), Positives = 156/234 (66%), Gaps = 7/234 (2%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHT-SGSHIINHLVRAKHKEVTLHKDGPLGET 158
HAC YCGI DPA V+ C KWFCN R T S I+ HLVR+++KEV LH D PLG+
Sbjct: 1 HACAYCGIRDPACVVKCVATDKWFCNSRHSTLPASCIVYHLVRSRNKEVQLHADSPLGDM 60
Query: 159 VLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC------AAQNSLKDMNWDQEQWKPLI 212
VLECY G RN+F LGF+P D VVVLL R P AA L DMN D QW+PLI
Sbjct: 61 VLECYLTGQRNVFTLGFVPCVDDEVVVLLARDPSMGVAGGAAAKQLADMNLDLAQWQPLI 120
Query: 213 ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVL 272
+D+ FL WLVK P E+ Q R R +T AQ +LEE+WK N A D + DE+ V
Sbjct: 121 SDKQFLPWLVKSPDEKTQVRARALTYAQANRLEELWKTNPNAGLDDADVLDDDEELQPVA 180
Query: 273 LRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 326
LRY D YQYQN+FGPL+K+EAD+D+ KESQ+++ + VRWDVGLNK+ +AYFS
Sbjct: 181 LRYADAYQYQNVFGPLLKIEADHDRAQKESQSKDGLRVRWDVGLNKRRLAYFSF 234
>gi|355727790|gb|AES09311.1| UPF1 regulator of nonsense transcripts-like protein [Mustela
putorius furo]
Length = 530
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/567 (67%), Positives = 437/567 (77%), Gaps = 60/567 (10%)
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
SQ L EL FEE+E+D ++ K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSG
Sbjct: 21 TSQLLAELNFEEDEED--TYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSG 78
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
SHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PC
Sbjct: 79 SHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPC 138
Query: 193 AAQNSLKDMNWDQEQW---KPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWK 249
A+Q+SLKD+NWD QW +PLI DR FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK
Sbjct: 139 ASQSSLKDINWDSSQWPQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWK 198
Query: 250 DNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVT 309
+N AT +DLEKPGVDE+P ++V
Sbjct: 199 ENPSATLEDLEKPGVDEEP-------------------------------------QHVL 221
Query: 310 VRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 369
+R++ D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+
Sbjct: 222 LRYE------------------DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDL 263
Query: 370 GLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLEL 429
GLNKK IAYF+L KTD DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL
Sbjct: 264 GLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIEL 323
Query: 430 KSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF 489
+SS GAP E T F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+
Sbjct: 324 RSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVII 383
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
+C LPK F+A LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q
Sbjct: 384 KCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNG 443
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELK 609
PVLVCAPSNIAVDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ EL+
Sbjct: 444 PVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQ 503
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNA 636
KL QLK+ETGELSSADEKRYR LK+ A
Sbjct: 504 KLQQLKDETGELSSADEKRYRALKRTA 530
>gi|118388103|ref|XP_001027152.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila]
gi|89308922|gb|EAS06910.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila SB210]
Length = 1112
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/888 (44%), Positives = 563/888 (63%), Gaps = 79/888 (8%)
Query: 80 LQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMC--NICKKWFCNGRGHTSG-SHII 136
Q +E ED+ + K LP HAC+YCG+H+ VI C C KWFCNG+ G SHII
Sbjct: 74 FQKKENEDEVFDIDFKNLPSHACEYCGVHNKNSVIKCLNKDCNKWFCNGKQQGQGASHII 133
Query: 137 NHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQN 196
HLV++KHKE+ +H + +T +ECY C V + + D +++ CR PC
Sbjct: 134 MHLVKSKHKEIQVHPENQNSDTTIECYICLVH-------LKNQEDQGLII-CRQPCLNLK 185
Query: 197 SLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATF 256
+M W+ E+W PLI ++ +SWL P+ ++ ++G +V+ QI + EE K N
Sbjct: 186 KYNEMQWEIEKWNPLIDEKMIVSWLASPPSAKQMEKGFKVSQKQIYEYEEQIKTNPNFKL 245
Query: 257 QDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGL 316
+ VLLRY+ G QY F L++ EA+YDK LKE+ ++TV+WD+ L
Sbjct: 246 AQGAAQSQVKKLKPVLLRYKTGKQYFQTFYNLIEAEANYDKALKENLHYNSITVKWDISL 305
Query: 317 NKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 376
+ +A F L + G+ ++ + G +K+ +K+ +E
Sbjct: 306 KSRKVAQFVLPQ--GEDNEFNLLSGSELKITYKKNKKDEE-------------------- 343
Query: 377 AYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAP 436
WS G + K+ +N DEV +EL +
Sbjct: 344 -------------------------------WSAKGTITKVGNN--DEVFVELSHNVKDT 370
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEV---LFRCHL 493
+ G++++F+WK T+ R++ ++KF D++ +S+++Y ++LGH +E L
Sbjct: 371 PPSGKGYTIEFVWKHTAVKRIKKGIKKFWQDEKCISSFLYFQILGHQNEEQQTPTLDIQL 430
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK------QT 547
PKH+S P +P+LN QV AVK A+Q+PL LIQGPPGTGKT TS I+Y LVK Q
Sbjct: 431 PKHYSLPKMPELNYYQVEAVKKALQQPLCLIQGPPGTGKTFTSTAIIYHLVKNIQKSGQR 490
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS- 606
G VLVCAPSNI VDQL E+IH+ G+KVVR+C++SRE I S V FL LHNQ+R+++ +
Sbjct: 491 GQ-VLVCAPSNIVVDQLAERIHQAGIKVVRMCSRSREMISSSVEFLTLHNQVRSLDFDEY 549
Query: 607 -ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
E++KLL+LKE+ GEL DE +Y LK+ EK +L NA+VIC TC+ + DPRL I+F
Sbjct: 550 KEMQKLLELKEDQGELDHDDEDKYYSLKRQGEKEILRNAEVICSTCISSADPRLKDIRFK 609
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
+LIDE+ QA EPEC++P++ GAK +ILVGDH QLGPVV C+ A+AGL++SLFER+V +
Sbjct: 610 HVLIDEATQAIEPECLLPMLKGAKHVILVGDHRQLGPVVTCRDTAKAGLNKSLFERMVSM 669
Query: 726 GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT 785
GIRP RL+VQYRMHP+LS FPSN FYEG+LQNGV ++R+ +FPWP +KP++F +
Sbjct: 670 GIRPIRLQVQYRMHPDLSIFPSNTFYEGTLQNGVTFNDRQFHG-EFPWPNKNKPLMFLNS 728
Query: 786 QGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
G EEI+ SGTSY+NR E + +E I R I+ +KPEQIG+ITPY+GQR ++ ++ G
Sbjct: 729 CGVEEISSSGTSYLNRQETALIEDIVFRLIKAKVKPEQIGIITPYKGQRFYIGDYLSKNG 788
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
L +Y++IE+ASVD FQGREKD II+SCVRSN+ QGIGFL DPRRLNVA+TRA+YG+I
Sbjct: 789 RLNHVLYRQIEIASVDGFQGREKDYIIISCVRSNECQGIGFLTDPRRLNVAITRARYGLI 848
Query: 906 VIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY 953
++GN KVL++ LWNNLLN KE KVLV+G LN+L++ + F +P++Y
Sbjct: 849 IVGNAKVLARDNLWNNLLNHMKENKVLVDGTLNDLRQCTLKFRQPQKY 896
>gi|237838453|ref|XP_002368524.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
gi|211966188|gb|EEB01384.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
Length = 1449
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/1009 (43%), Positives = 585/1009 (57%), Gaps = 192/1009 (19%)
Query: 79 ELQFEEEEDDGNEF-FNKELPPHACKYCGIHDPAYVIMCNICKKWFCN----GRGHTSGS 133
E + E +ED G KE+P HAC YCG P V+ C C K+FCN G + GS
Sbjct: 174 EPREELKEDHGRGGKATKEIPEHACSYCGASSPDCVLKCCCCNKYFCNSPCSASGSSMGS 233
Query: 134 HIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCA 193
HII HLV+++H+EV LH +GPLG+ LEC+ CG RN+F+LG IPA+ + VVVL+CR PC
Sbjct: 234 HIIFHLVKSRHREVMLHPEGPLGDCTLECFQCGSRNVFLLGLIPAEQEGVVVLICREPCL 293
Query: 194 AQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAE 253
+ +LK WD QW+PLI +SFL WLV+ E+QR V + Q
Sbjct: 294 SSGALKQSGWDLTQWQPLIEGKSFLPWLVRSTLTAEEQRDCHVVTTQ------------- 340
Query: 254 ATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWD 313
L R E+ +Q P LE + SQT+E
Sbjct: 341 -----------------QLQRLEELWQKN----PQATLE-------ELSQTKEEAP---- 368
Query: 314 VGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNK 373
L + Y DG+ YQ F PLV+ EAD+DK++K+ Q V +RW+ GLN+
Sbjct: 369 --LPCVKLVYE-------DGFDYQRTFAPLVQAEADFDKQIKDGQKLVRVKLRWEQGLNR 419
Query: 374 KSIAYFSLAKTDG-DMRLMQGDELKLR----------------------------YSYDA 404
+ +AYF ++ +G ++R+ GDE+K+ YS +A
Sbjct: 420 RRLAYFMYSRDEGCNVRVAAGDEVKISTVLPKSVLSGASSSAPASSGGSHGSGCTYSNEA 479
Query: 405 SKT-------------------WSGLGHVIKIPDNFGDEVGLELKSSAGAP----TEATT 441
+ + WS G + + ++ +EV +E+K A +
Sbjct: 480 TSSNGVGSGGTAGLEGDGNFVQWSCTGSITRFSED-SEEVIVEVKKPPNAKGAWDSPVPL 538
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
++++F+WKSTSF+RMQ ALR+ AVD+ SVS+Y+YH L+G ++ + + +P SAPN
Sbjct: 539 LYTIEFVWKSTSFERMQAALRQLAVDEISVSSYLYHTLMGKQMEHQIIQTPMPLQISAPN 598
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---------------- 545
L LN SQ+ A+++A+Q PLSLIQGPPGTGKT+T +T+VYQ+VK
Sbjct: 599 LAPLNPSQMLAIRYALQHPLSLIQGPPGTGKTLTCSTLVYQMVKLSEVGSHIHPRCAGRV 658
Query: 546 -QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV-SF----LALHNQI 599
+ G VLV APSN+AVDQL E+I+RTGLKV+R+ +KSRE S + SF LALH ++
Sbjct: 659 NKEGGQVLVVAPSNVAVDQLAERINRTGLKVIRMYSKSREGASSSLTSFCVENLALHKKV 718
Query: 600 RNMEMNS--ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
++ S E+ K +QLKE+TGEL++ADE+R R+L AE +L ADVIC TCVGAGD
Sbjct: 719 LELKTGSSDEMAKYIQLKEQTGELAAADERRLRLLISRAEMEILQTADVICTTCVGAGDN 778
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
RL +F ++IDE+ QATEPEC++P++LGAKQ++L+GDHCQLGPVV+ KKAA AGL+ S
Sbjct: 779 RLQGFRFRQVVIDEAAQATEPECLIPIVLGAKQVVLIGDHCQLGPVVLSKKAAAAGLATS 838
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL-----SKIDFP 772
LF RL+ LG RP RL+VQYRMHP LS FPS FFYEG LQNGV ER FP
Sbjct: 839 LFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHQGPGDHRFP 898
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP ++PM FY + EEI+GSGTSYVNR EASN+EKI T ++CG+K QIGVITPY+G
Sbjct: 899 WPNEERPMFFYHSTASEEISGSGTSYVNRVEASNIEKIVTFLLKCGLKASQIGVITPYDG 958
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QRA + Q Q +L + ++EVASVDAFQGREKD I++SCVRSN + GIGFL D RR
Sbjct: 959 QRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRR 1018
Query: 893 LNVALTRAKYGIIVIGNPKVLS-------------------------------------- 914
LNVA+TRAKYG+I+ GN VL+
Sbjct: 1019 LNVAMTRAKYGLIICGNATVLANYMPRVARPPGAPAAPPPGSGTTGLPGNALGPCGVQVG 1078
Query: 915 -------------KQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
+ P+W L++ Y + ++V+GPL+NLK S I + P
Sbjct: 1079 PGASTLSGTPCVPEPPIWRLLIHHYLKYDLVVDGPLSNLKPSKIRITLP 1127
>gi|221484204|gb|EEE22500.1| regulator of nonsense transcripts 1 protein, putative [Toxoplasma
gondii GT1]
Length = 1449
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/1009 (43%), Positives = 585/1009 (57%), Gaps = 192/1009 (19%)
Query: 79 ELQFEEEEDDGNEF-FNKELPPHACKYCGIHDPAYVIMCNICKKWFCN----GRGHTSGS 133
E + E +ED G KE+P HAC YCG P V+ C C K+FCN G + GS
Sbjct: 174 EPREELKEDHGRGGKATKEIPEHACSYCGASSPDCVLKCCCCNKYFCNSPCSASGSSMGS 233
Query: 134 HIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCA 193
HII HLV+++H+EV LH +GPLG+ LEC+ CG RN+F+LG IPA+ + VVVL+CR PC
Sbjct: 234 HIIFHLVKSRHREVMLHPEGPLGDCTLECFQCGSRNVFLLGLIPAEQEGVVVLICREPCL 293
Query: 194 AQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAE 253
+ +LK WD QW+PLI +SFL WLV+ E+QR V + Q
Sbjct: 294 SSGALKQSGWDLTQWQPLIEGKSFLPWLVRSTLTAEEQRDCHVVTTQ------------- 340
Query: 254 ATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWD 313
L R E+ +Q P LE + SQT+E
Sbjct: 341 -----------------QLQRLEELWQKN----PQATLE-------ELSQTKEEAP---- 368
Query: 314 VGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNK 373
L + Y DG+ YQ F PLV+ EAD+DK++K+ Q V +RW+ GLN+
Sbjct: 369 --LPCVKLVYE-------DGFDYQRTFAPLVQAEADFDKQIKDGQKLVRVKLRWEQGLNR 419
Query: 374 KSIAYFSLAKTDG-DMRLMQGDELKLR----------------------------YSYDA 404
+ +AYF ++ +G ++R+ GDE+K+ YS +A
Sbjct: 420 RRLAYFMYSRDEGCNVRVAAGDEVKISTVLPKSVLSGASSSAPASSGGSHGSGCTYSNEA 479
Query: 405 SKT-------------------WSGLGHVIKIPDNFGDEVGLELKSSAGAP----TEATT 441
+ + WS G + + ++ +EV +E+K A +
Sbjct: 480 TSSNGVGSGGTAGLEGDGNFVQWSCTGSITRFSED-SEEVIVEVKKPPNAKGAWDSPVPL 538
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
++++F+WKSTSF+RMQ ALR+ AVD+ SVS+Y+YH L+G ++ + + +P SAPN
Sbjct: 539 LYTIEFVWKSTSFERMQAALRQLAVDEISVSSYLYHTLMGKQMEHQIIQTPMPLQISAPN 598
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---------------- 545
L LN SQ+ A+++A+Q PLSLIQGPPGTGKT+T +T+VYQ+VK
Sbjct: 599 LAPLNPSQMLAIRYALQHPLSLIQGPPGTGKTLTCSTLVYQMVKLSEVGSHIHPRCAGRV 658
Query: 546 -QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV-SF----LALHNQI 599
+ G VLV APSN+AVDQL E+I+RTGLKV+R+ +KSRE S + SF LALH ++
Sbjct: 659 NKEGGQVLVVAPSNVAVDQLAERINRTGLKVIRMYSKSREGASSSLTSFCVENLALHKKV 718
Query: 600 RNMEMNS--ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
++ S E+ K +QLKE+TGEL++ADE+R R+L AE +L ADVIC TCVGAGD
Sbjct: 719 LELKTGSSDEMAKYIQLKEQTGELAAADERRLRLLISRAEMEILQTADVICTTCVGAGDN 778
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
RL +F ++IDE+ QATEPEC++P++LGAKQ++L+GDHCQLGPVV+ KKAA AGL+ S
Sbjct: 779 RLQGFRFRQVVIDEAAQATEPECLIPIVLGAKQVVLIGDHCQLGPVVLSKKAAAAGLATS 838
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL-----SKIDFP 772
LF RL+ LG RP RL+VQYRMHP LS FPS FFYEG LQNGV ER FP
Sbjct: 839 LFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHQGPGDHRFP 898
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP ++PM FY + EEI+GSGTSYVNR EASN+EKI T ++CG+K QIGVITPY+G
Sbjct: 899 WPNEERPMFFYHSTASEEISGSGTSYVNRIEASNIEKIVTFLLKCGLKASQIGVITPYDG 958
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QRA + Q Q +L + ++EVASVDAFQGREKD I++SCVRSN + GIGFL D RR
Sbjct: 959 QRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRR 1018
Query: 893 LNVALTRAKYGIIVIGNPKVLS-------------------------------------- 914
LNVA+TRAKYG+I+ GN VL+
Sbjct: 1019 LNVAMTRAKYGLIICGNATVLANYMPRVARPPGAPAAPPPGGGTTGLPGNALGPCGVQVG 1078
Query: 915 -------------KQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
+ P+W L++ Y + ++V+GPL+NLK S I + P
Sbjct: 1079 PGASTLSGTPCVPEPPIWRLLIHHYLKYDLVVDGPLSNLKPSKIRITLP 1127
>gi|221505815|gb|EEE31460.1| regulator or nonsense transcripts RENT1, putative [Toxoplasma gondii
VEG]
Length = 1449
Score = 781 bits (2017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/1009 (43%), Positives = 585/1009 (57%), Gaps = 192/1009 (19%)
Query: 79 ELQFEEEEDDGNEF-FNKELPPHACKYCGIHDPAYVIMCNICKKWFCN----GRGHTSGS 133
E + E +ED G KE+P HAC YCG P V+ C C K+FCN G + GS
Sbjct: 174 EPREELKEDHGRGGKATKEIPEHACSYCGASSPDCVLKCCCCNKYFCNSPCSASGSSMGS 233
Query: 134 HIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCA 193
HII HLV+++H+EV LH +GPLG+ LEC+ CG RN+F+LG IPA+ + VVVL+CR PC
Sbjct: 234 HIIFHLVKSRHREVMLHPEGPLGDCTLECFQCGSRNVFLLGLIPAEQEGVVVLICREPCL 293
Query: 194 AQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAE 253
+ +LK WD QW+PLI +SFL WLV+ E+QR V + Q
Sbjct: 294 SSGALKQSGWDLTQWQPLIEGKSFLPWLVRSTLTAEEQRDCHVVTTQ------------- 340
Query: 254 ATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWD 313
L R E+ +Q P LE + SQT+E
Sbjct: 341 -----------------QLQRLEELWQKN----PQATLE-------ELSQTKEEAP---- 368
Query: 314 VGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNK 373
L + Y DG+ YQ F PLV+ EAD+DK++K+ Q V +RW+ GLN+
Sbjct: 369 --LPCVKLVYE-------DGFDYQRTFAPLVQAEADFDKQIKDGQKLVRVKLRWEQGLNR 419
Query: 374 KSIAYFSLAKTDG-DMRLMQGDELKLR----------------------------YSYDA 404
+ +AYF ++ +G ++R+ GDE+K+ YS +A
Sbjct: 420 RRLAYFMYSRDEGCNVRVAAGDEVKISTVLPKSVLSGASSSAPASSGGSHGSGCTYSNEA 479
Query: 405 SKT-------------------WSGLGHVIKIPDNFGDEVGLELKSSAGAP----TEATT 441
+ + WS G + + ++ +EV +E+K A +
Sbjct: 480 TSSNGVGSGGTAGLEGDGNFVQWSCTGSITRFSED-SEEVIVEVKKPPNAKGAWDSPVPL 538
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
++++F+WKSTSF+RMQ ALR+ AVD+ SVS+Y+YH L+G ++ + + +P SAPN
Sbjct: 539 LYTIEFVWKSTSFERMQAALRQLAVDEISVSSYLYHTLMGKQMEHQIIQTPMPLQISAPN 598
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---------------- 545
L LN SQ+ A+++A+Q PLSLIQGPPGTGKT+T +T+VYQ+VK
Sbjct: 599 LAPLNPSQMLAIRYALQHPLSLIQGPPGTGKTLTCSTLVYQMVKLSEVGSHIHPRCAGRV 658
Query: 546 -QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV-SF----LALHNQI 599
+ G VLV APSN+AVDQL E+I+RTGLKV+R+ +KSRE S + SF LALH ++
Sbjct: 659 NKEGGQVLVVAPSNVAVDQLAERINRTGLKVIRMYSKSREGASSSLTSFCVENLALHKKV 718
Query: 600 RNMEMNS--ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
++ S E+ K +QLKE+TGEL++ADE+R R+L AE +L ADVIC TCVGAGD
Sbjct: 719 LELKTGSSDEMAKYIQLKEQTGELAAADERRLRLLISRAEMEILQTADVICTTCVGAGDN 778
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
RL +F ++IDE+ QATEPEC++P++LGAKQ++L+GDHCQLGPVV+ KKAA AGL+ S
Sbjct: 779 RLQGFRFRQVVIDEAAQATEPECLIPIVLGAKQVVLIGDHCQLGPVVLSKKAAAAGLATS 838
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL-----SKIDFP 772
LF RL+ LG RP RL+VQYRMHP LS FPS FFYEG LQNGV ER FP
Sbjct: 839 LFSRLLALGHRPLRLKVQYRMHPALSFFPSYFFYEGELQNGVTMTERTYFHQGPGDHRFP 898
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
WP ++PM FY + EEI+GSGTSYVNR EASN+EKI T ++CG+K QIGVITPY+G
Sbjct: 899 WPNEERPMFFYHSTASEEISGSGTSYVNRIEASNIEKIVTFLLKCGLKASQIGVITPYDG 958
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QRA + Q Q +L + ++EVASVDAFQGREKD I++SCVRSN + GIGFL D RR
Sbjct: 959 QRAHISSLFQRQTTLGQAAFADLEVASVDAFQGREKDFILLSCVRSNSNTGIGFLADSRR 1018
Query: 893 LNVALTRAKYGIIVIGNPKVLS-------------------------------------- 914
LNVA+TRAKYG+I+ GN VL+
Sbjct: 1019 LNVAMTRAKYGLIICGNATVLANYMPRVARPPGAPAAPPPGSGTTGLPGNALGPCGVQVG 1078
Query: 915 -------------KQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
+ P+W L++ Y + ++V+GPL+NLK S I + P
Sbjct: 1079 PGASTLSGTPCVPEPPIWRLLIHHYLKYDLVVDGPLSNLKPSKIRITLP 1127
>gi|328353104|emb|CCA39502.1| Regulator of nonsense transcripts 1 [Komagataella pastoris CBS
7435]
Length = 967
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/893 (47%), Positives = 556/893 (62%), Gaps = 70/893 (7%)
Query: 54 VNQ-IQVNGKQNLDNSNLN-LVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPA 111
VNQ I V+ + +L +L+ L++Q E+E LP HACKYCG+ +P
Sbjct: 11 VNQSIDVSSESSLSKQDLDKLINQNSENFVSHEQEI----LSLTALPEHACKYCGVSNPR 66
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+ C+ICKKWFCNG+ T+ SHII+H+V ++H EV+LH D LGET LECY+CG ++ F
Sbjct: 67 CVVRCDICKKWFCNGKSGTT-SHIISHMVLSRHHEVSLHSDSDLGETELECYSCGNKDPF 125
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
+LGF+ AK D++VV+LCR PC+ KD +W+ W+PL+ +R FL W+ PT +
Sbjct: 126 MLGFVSAKTDTIVVILCRIPCSQA---KDSDWNTANWQPLVEERCFLDWIADYPTPLDMA 182
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKL 291
R ++ I+ KL
Sbjct: 183 NARAISPLDIS-----------------------------------------------KL 195
Query: 292 EADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYD 351
E + R E+ T E++ D+ + + A+ + + DG +YQ IF PLV A YD
Sbjct: 196 ERQW--RSDETATLEDIK---DLSM---ADAFEPVLDSYVDGREYQKIFSPLVDATAQYD 247
Query: 352 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-DMRLMQGDELKLRYSYDASKTWSG 410
K+L ESQ ++V W + + +A FSL+ D ++++ GDE+ L Y + W G
Sbjct: 248 KQLTESQGLNYISVSWSMSPHNYHLAKFSLSSYDSSNLKIAVGDEIILHYDGIKEEKWQG 307
Query: 411 LGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQ 469
G+VIK+P + + LEL+ SS PTE GF + +WK SF RMQ AL FA + +
Sbjct: 308 SGYVIKLPATYSEGFTLELQPSSVKPPTEHNVGFRAEIVWKGISFQRMQAALTTFA-EKK 366
Query: 470 SVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPG 529
S+S +Y LLGH ++ F LP+ S PN LN SQV AVK +Q+ LSLIQGPPG
Sbjct: 367 SISKDLYDILLGHKEEQPEFTAKLPEAISVPNFTQLNPSQVNAVKSVLQQRLSLIQGPPG 426
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSP 589
TGKTVTSATIVY L K VLV A SNIAVD L K+ GLKVVRV A+SRE ++S
Sbjct: 427 TGKTVTSATIVYHLAKSKKKKVLVTASSNIAVDHLASKLEDIGLKVVRVTARSRENVESA 486
Query: 590 VSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICC 649
+ L+L + + N N LKKLL+ K+E G LS D Y K AE +L A V+CC
Sbjct: 487 IDHLSLSSLVSNTN-NPVLKKLLKKKDELGSLSKKDMNIYISQTKKAEAEILAEAHVVCC 545
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
TC GAGD RL IKF +LIDES Q +EPE ++P++ GAKQ+ILVGDH QLGPV++ A
Sbjct: 546 TCSGAGDKRLANIKFPYVLIDESTQPSEPESLIPIVKGAKQVILVGDHQQLGPVILHNGA 605
Query: 710 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
A+AGL QSLFERL+ LG P RLEVQYRMHP LS+FPSN FY+GSLQNGV ++R + +
Sbjct: 606 AKAGLRQSLFERLIKLGHIPIRLEVQYRMHPSLSEFPSNMFYDGSLQNGVSHEQRLIRRS 665
Query: 770 DFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
FPWP P P+LF+ + G EEI+ SGTS++NR+EA N EKI +R + G+KP QIGVITP
Sbjct: 666 SFPWPAPGIPLLFWSSYGTEEISISGTSFLNRSEAMNCEKIISRLLSEGIKPHQIGVITP 725
Query: 830 YEGQRAFLVQHMQYQGSLPAK-IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Y+GQR ++VQ++ G+ P + IYQ++EVASVDAFQGREKD II SC RSN IGFL
Sbjct: 726 YQGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFIIFSCTRSNHTNTIGFLK 785
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLK 941
D RRLNVA+TRAKYG+ V+GN K L K PLWN LL ++++ LVEG L++ +
Sbjct: 786 DARRLNVAITRAKYGLFVLGNIKTLQKDPLWNRLLVHFRDKGALVEGRLDSFQ 838
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/805 (49%), Positives = 523/805 (64%), Gaps = 103/805 (12%)
Query: 192 CAA-QNSLKDM----NWDQEQWKPLIADRSFLSWLVKVPTEQEQQR-GRQVTSAQIAKLE 245
CA+ N+LK++ +WD +W+P+I DR L WLV +PT +E +R G++ TS + KLE
Sbjct: 422 CASVGNNLKELIKMKDWDLNKWQPVIEDRCLLEWLVNIPTAEEAERKGKRTTSYNVNKLE 481
Query: 246 EVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQ 305
E+WK+ + +L+ ++++P VK+E Y
Sbjct: 482 ELWKNKKDVYIDELDAEILNDEP--------------------VKVELRYK--------- 512
Query: 306 ENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTV 365
D Y YQ+IF PL++LEADYDK +KE Q Q NVTV
Sbjct: 513 --------------------------DAYHYQSIFAPLIQLEADYDKSIKEGQKQANVTV 546
Query: 366 RWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEV 425
RWD+GLNKK A+F K + ++RL+ GDELKL Y+Y WS GH+ +I + +E+
Sbjct: 547 RWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPDGTIWSCEGHISRIHNT--EEI 604
Query: 426 GLELKSSAGAP----TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
LEL++S+ A TTG++V+F+WKST++DRMQLAL +FA D SVS Y+YH+LLG
Sbjct: 605 ALELRTSSTANGPWVNNITTGYTVEFVWKSTAYDRMQLALNEFAQDSYSVSGYLYHKLLG 664
Query: 482 HNVDEVLF--------------RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGP 527
H V E R ++SAPNL LN SQ+ A+K ++ PLSLIQGP
Sbjct: 665 HEVTEESLNYYKTALSNQVHGKRTQRIVNYSAPNLAALNHSQIDAIKKSLVSPLSLIQGP 724
Query: 528 PGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAID 587
PGTGKT+T AT+VY L K VLV APSN+AVDQL+ +IH+TGLKVVR+CAKSRE +
Sbjct: 725 PGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSREYVP 784
Query: 588 SPVSFLALHNQIRNM--EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNAD 645
S +L LHNQ++ + ++ EL KLL+LKEE GELS DE+R + L AE +L AD
Sbjct: 785 SIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGELSQKDERRLKKLIFFAEYKILLEAD 844
Query: 646 VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM 705
VIC TCVGA D RL + +F +L+DE+ Q+TEPEC+VP++ GAKQ++LVGDHCQLGP+++
Sbjct: 845 VICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIV 904
Query: 706 CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
CKKAA AGL +SLFERLV+LGI PFRLEVQYRMHP LS+FPS FY+G LQNG+ ER+
Sbjct: 905 CKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKERE 964
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIG 825
DFPWP P PM FY + G EE++ SGTSY+NR EASN+EK+ I CG+KP QIG
Sbjct: 965 YPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRAEASNMEKLVRTLINCGLKPTQIG 1024
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
VITPYEGQRA++ +Q ++ + EIEVASVDAFQGREKD I++SCVRSN GIG
Sbjct: 1025 VITPYEGQRAYITS--LFQKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIG 1082
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ------------------PLWNNLLNFYK 927
FLNDPRRLNVALTRAKYG+I+ GN KVLS+ +W NLL+ +K
Sbjct: 1083 FLNDPRRLNVALTRAKYGLIICGNAKVLSRHHVMIKRSYNSNETITNVNSVWINLLSQFK 1142
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQ 952
++ ++VEG L+NLK I P +
Sbjct: 1143 KKDLIVEGCLSNLKPMNIHIPTPTK 1167
Score = 136 bits (342), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 94 NKELPPH-ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKD 152
NKE P + C+YC + V+ CN C +WFCNG T GSHI+ HLVR+KHKE+ LHK
Sbjct: 146 NKEKPKYFRCRYCEMDSVDSVVQCNTCSRWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKK 205
Query: 153 GPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQ 195
LGET+LECY CG +N+F+LGF+P + VVV++CR PC A+
Sbjct: 206 SLLGETILECYNCGCKNVFLLGFLPTPEEGVVVIICRDPCLAR 248
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/803 (49%), Positives = 523/803 (65%), Gaps = 103/803 (12%)
Query: 192 CAA-QNSLKDM----NWDQEQWKPLIADRSFLSWLVKVPTEQEQQR-GRQVTSAQIAKLE 245
CA+ N+LK++ +WD +W+P+I DR L WLV +PT +E +R G++ TS + KLE
Sbjct: 513 CASVGNNLKELIKMKDWDLNKWQPVIEDRCLLEWLVNIPTAEEAERKGKRTTSYNVNKLE 572
Query: 246 EVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQ 305
E+WK+ + +L+ ++++P VK+E Y
Sbjct: 573 ELWKNKKDVYIDELDGEILNDEP--------------------VKVELRYK--------- 603
Query: 306 ENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTV 365
D Y YQ+IF PL++LEADYDK +KE Q Q NVTV
Sbjct: 604 --------------------------DAYHYQSIFAPLIQLEADYDKSIKEGQKQANVTV 637
Query: 366 RWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEV 425
RWD+GLNKK A+F K + ++RL+ GDELKL Y+Y WS GH+ +I + +E+
Sbjct: 638 RWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPDGTIWSCEGHISRIHNT--EEI 695
Query: 426 GLELKSS--AGAP--TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
LEL++S A P TTG++V+F+WKST++DRMQLAL +FA + S+S Y+YH+LLG
Sbjct: 696 ALELRTSNTANGPWVDNITTGYTVEFVWKSTAYDRMQLALNEFAQNSYSLSGYLYHKLLG 755
Query: 482 HNVDE---VLFRCHLPK-----------HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGP 527
H V E ++ L ++SAPNL LN SQ+ A+K ++ PLSLIQGP
Sbjct: 756 HEVSEDSLNYYKAALTNQIHGKRTPRIANYSAPNLAALNHSQIDAIKKSLVSPLSLIQGP 815
Query: 528 PGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAID 587
PGTGKT+T AT+VY L K VLV APSN+AVDQL+ +IH+TGLKVVR+CAKSRE +
Sbjct: 816 PGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSREYVP 875
Query: 588 SPVSFLALHNQIR--NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNAD 645
S +L LHNQ++ ++ EL KLL+LKEE GELS DE+R + L AE +L AD
Sbjct: 876 SIADYLYLHNQMKLIKSDIGEELNKLLELKEEVGELSQKDERRLKKLIFFAEYKILVEAD 935
Query: 646 VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM 705
VIC TCVGA D RL + +F +L+DE+ Q+TEPEC+VP++ GAKQ++LVGDHCQLGP+++
Sbjct: 936 VICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIV 995
Query: 706 CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
CKKAA AGL +SLFERLV+LGI PFRLEVQYRMHP LS+FPS FY+G LQNG+ ER+
Sbjct: 996 CKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKERE 1055
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIG 825
DFPWP P PM FY + G EE++ SGTSY+NR EASN+EK+ I CG+KP QIG
Sbjct: 1056 YPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRAEASNMEKLVRTLINCGLKPSQIG 1115
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
VITPYEGQRA++ +Q ++ + EIEVASVDAFQGREKD I++SCVRSN GIG
Sbjct: 1116 VITPYEGQRAYITS--LFQKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIG 1173
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ------------------PLWNNLLNFYK 927
FLNDPRRLNVALTRAKYG+I+ GN KVLS+ +W NLL+ +K
Sbjct: 1174 FLNDPRRLNVALTRAKYGLIICGNAKVLSRHHVMIKKLHNSNETITNVNSVWINLLSQFK 1233
Query: 928 EQKVLVEGPLNNLKESLILFSKP 950
++ ++VEG L+NLK I P
Sbjct: 1234 KKDLIVEGCLSNLKPMNIHIPTP 1256
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 94 NKELPPH-ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKD 152
NKE P + C+YC + V+ CN C +WFCNG T GSHI+ HLVR+KHKE+ LHK
Sbjct: 262 NKEEPKYFRCRYCEMDSVDSVVQCNTCGRWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKK 321
Query: 153 GPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQ 195
LGET+LECY CG +N+F+LGF+P + VVV++CR PC A+
Sbjct: 322 SLLGETILECYNCGCKNVFLLGFLPTPEEGVVVIICRDPCLAR 364
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/804 (49%), Positives = 526/804 (65%), Gaps = 104/804 (12%)
Query: 192 CAA-QNSLKDM----NWDQEQWKPLIADRSFLSWLVKVPTEQEQQR-GRQVTSAQIAKLE 245
CA N+LK++ +WD +W+P+I DR L WLV +PT +E +R G++ TS + KLE
Sbjct: 537 CATVGNNLKELIKMKDWDLNKWQPVIEDRCLLDWLVNIPTAEEAERKGKRTTSYNVNKLE 596
Query: 246 EVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQ 305
E+WK+ + +L+ ++++P VK+E Y+
Sbjct: 597 ELWKNKKDVYIDELDGEILNDEP--------------------VKVELRYE--------- 627
Query: 306 ENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTV 365
D Y YQ+IF PL++LEADYDK +KE Q Q NVTV
Sbjct: 628 --------------------------DAYHYQSIFAPLIQLEADYDKSIKEGQKQANVTV 661
Query: 366 RWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEV 425
RWD+GLNKK A+F K + ++RL+ GDELKL Y+Y WS GH+ +I + +E+
Sbjct: 662 RWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPNGTVWSCEGHISRIHNT--EEI 719
Query: 426 GLELKSSAGAP----TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
LEL++S+ A TTG++V+F+WKST++DRMQLAL +FA + S+S Y+YH+LLG
Sbjct: 720 ALELRTSSTANGPWVNNITTGYAVEFVWKSTAYDRMQLALNEFAQNSYSLSGYLYHKLLG 779
Query: 482 HNVDE-------------VLFRCHLPK--HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 526
H V E V + P+ ++SAPNL LN SQ+ A+K ++ PLSLIQG
Sbjct: 780 HEVSEESLNYYKTALSSQVHGKRSPPRIVNYSAPNLAALNHSQIDAIKKSLVSPLSLIQG 839
Query: 527 PPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAI 586
PPGTGKT+T AT+VY L K VLV APSN+AVDQL+ +IH+TGLKVVR+CAKSRE +
Sbjct: 840 PPGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSREYV 899
Query: 587 DSPVSFLALHNQIRNM--EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNA 644
S +L LHNQ++ + ++ EL KLL+LKEE GELS DE+R + L AE +L A
Sbjct: 900 PSIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGELSQKDERRLKKLIFFAEYKILLEA 959
Query: 645 DVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV 704
DVIC TCVGA D RL + +F +L+DE+ Q+TEPEC+VP++ GAKQ++LVGDHCQLGP++
Sbjct: 960 DVICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPII 1019
Query: 705 MCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
+CKKAA AGL +SLFERLV+LGI PFRLEVQYRMHP LS+FPS FY+G LQNG+ ER
Sbjct: 1020 VCKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKER 1079
Query: 765 KLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
+ DFPWP P PM FY + G EE++ SGTSY+NR EASN+EK+ I CG+KP QI
Sbjct: 1080 EYPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRAEASNMEKLVRTLISCGLKPTQI 1139
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
GVITPYEGQRA++ +Q ++ + EIEVASVDAFQGREKD I++SCVRSN GI
Sbjct: 1140 GVITPYEGQRAYITS--LFQKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGI 1197
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ------------------PLWNNLLNFY 926
GFLNDPRRLNVALTRAKYG+I+ GN KVLS+ +W NLL+ +
Sbjct: 1198 GFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHVMIKKMHNSNETITNVNSVWINLLSQF 1257
Query: 927 KEQKVLVEGPLNNLKESLILFSKP 950
K+++++VEG L+NLK I P
Sbjct: 1258 KKKELIVEGCLSNLKPMNIHIPTP 1281
Score = 136 bits (343), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Query: 94 NKELPPH-ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKD 152
NKE P + C+YC + V+ CN C +WFCNG T GSHI+ HLVR+KHKE+ LHK
Sbjct: 261 NKEKPKYFRCRYCEMDSVDSVVQCNTCNRWFCNGSYGTCGSHIVTHLVRSKHKEIKLHKK 320
Query: 153 GPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQ 195
LGET+LECY CG +N+F+LGF+P + VVV++CR PC A+
Sbjct: 321 SLLGETILECYNCGCKNVFLLGFLPTPEEGVVVIICRDPCLAR 363
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/778 (49%), Positives = 517/778 (66%), Gaps = 97/778 (12%)
Query: 202 NWDQEQWKPLIADRSFLSWLVKVPTEQEQQR-GRQVTSAQIAKLEEVWKDNAEATFQDLE 260
+WD ++W+P+I DR FL WLV +P+ +E +R G+ TS + KLEE+WK+ + +L
Sbjct: 523 DWDLKKWQPVIEDRFFLEWLVNIPSNEEAERKGKLSTSYNVNKLEELWKNKKDVYIDELN 582
Query: 261 KPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKS 320
++++P+ K+E Y+
Sbjct: 583 FEILNDEPN--------------------KVELKYE------------------------ 598
Query: 321 IAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFS 380
D + YQ+IF PLV+LEADYDK +KE Q Q NV+VRWD+GLNKK A+F
Sbjct: 599 -----------DAHHYQSIFSPLVQLEADYDKSIKEGQKQGNVSVRWDIGLNKKRYAHFI 647
Query: 381 LAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSS--AGAP-- 436
K + ++RL+ GDELK+ Y+Y W GH+ ++ + +E+ LEL++S + P
Sbjct: 648 YIKEESELRLVAGDELKISYTYPDGSVWCCEGHISRLHN--TEEISLELRTSCTSNGPWV 705
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE---------- 486
TTGF+V+FIWKST++DRMQLAL +FA++ S+S ++YH+LLGH++ E
Sbjct: 706 DNITTGFTVEFIWKSTAYDRMQLALNEFALNSYSLSGFLYHKLLGHDISEDSLEYNKNTF 765
Query: 487 ---VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL 543
+ + +++SAPNL LN SQ+ A+K ++ PLSLIQGPPGTGKT+T AT+VY L
Sbjct: 766 HKLMHKKVMSIRNYSAPNLAPLNHSQIDAIKRSLLSPLSLIQGPPGTGKTLTCATLVYHL 825
Query: 544 VKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR--N 601
VK VLV APSN+AVDQL+ +IHR+GLKVVR+C+KSRE++ S +L LHNQ++
Sbjct: 826 VKMNMGKVLVTAPSNVAVDQLSVRIHRSGLKVVRLCSKSRESVPSIAEYLYLHNQMKLLK 885
Query: 602 MEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
++ EL KLL+LKEE GELS DE+R + L AE +L ADVICCTCVGA D RL K
Sbjct: 886 TDIAEELNKLLELKEEVGELSQKDERRLKKLILFAEHEILIEADVICCTCVGAMDKRLKK 945
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
+F +L+DE+ Q+TEPEC+VP++ GAKQ++LVGDHCQLGP+++CKKAA AGL +SLFER
Sbjct: 946 FRFRQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAANAGLGKSLFER 1005
Query: 722 LVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
LV+LGI PFRLEVQYRMHP LS+FPS FY+GSLQNG+ ER+ FPWP PM
Sbjct: 1006 LVMLGITPFRLEVQYRMHPALSEFPSYVFYDGSLQNGITLKEREYPLKSFPWPNAKCPMF 1065
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
FY + G EE++ SGTSY+NR+EASN+EK+ ++CG+KP QIGVITPYEGQRA++
Sbjct: 1066 FYNSTGLEEMSASGTSYLNRSEASNMEKLVRTLLQCGLKPSQIGVITPYEGQRAYITS-- 1123
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
+Q ++ + +IEVASVDAFQGREKD I++SCVRSN GIGFLNDPRRLNVALTRAK
Sbjct: 1124 LFQKNISFQNSSDIEVASVDAFQGREKDFILLSCVRSNKKLGIGFLNDPRRLNVALTRAK 1183
Query: 902 YGIIVIGNPKVLSKQ------------------PLWNNLLNFYKEQKVLVEGPLNNLK 941
YG+I+ GN KVLS+ +W NLL+ +K++ ++VEG L NLK
Sbjct: 1184 YGLIICGNAKVLSRHHFISREKINANETITNVNSVWINLLSQFKKKDLIVEGCLANLK 1241
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 77/114 (67%), Gaps = 4/114 (3%)
Query: 85 EEDDGNEFFNK----ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLV 140
EE + + NK +L + C+YC I V+ CN CK+WFCNG T GSHI+ HLV
Sbjct: 227 EEGNNYRYKNKKSKDDLKYYRCRYCEIDSIDSVVQCNNCKRWFCNGSYGTCGSHIVTHLV 286
Query: 141 RAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAA 194
R+KHKE+ LHK+ LGET+LECY C RN+F+LGF+P + VVV++CR PC +
Sbjct: 287 RSKHKEIRLHKNSLLGETILECYNCACRNVFLLGFLPTSEEGVVVIICRDPCLS 340
>gi|254571547|ref|XP_002492883.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
gi|238032681|emb|CAY70704.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
Length = 941
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/892 (45%), Positives = 540/892 (60%), Gaps = 94/892 (10%)
Query: 54 VNQ-IQVNGKQNLDNSNLN-LVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPA 111
VNQ I V+ + +L +L+ L++Q E+E LP HACKYCG+ +P
Sbjct: 11 VNQSIDVSSESSLSKQDLDKLINQNSENFVSHEQEI----LSLTALPEHACKYCGVSNPR 66
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+ C+ICKKWFCNG+ T+ SHII+H+V ++H EV+LH D LGET LECY+CG ++ F
Sbjct: 67 CVVRCDICKKWFCNGKSGTT-SHIISHMVLSRHHEVSLHSDSDLGETELECYSCGNKDPF 125
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
+LGF+ AK D++VV+LCR PC+ KD +W+ W+PL+ +R FL W+ PT +
Sbjct: 126 MLGFVSAKTDTIVVILCRIPCSQA---KDSDWNTANWQPLVEERCFLDWIADYPTPLDMA 182
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKL 291
R ++ I+KLE W+ + AT +D++ L+
Sbjct: 183 NARAISPLDISKLERQWRSDETATLEDIKD--------------------------LIDA 216
Query: 292 EADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYD 351
A YDK+L ESQ ++V W + + +A FSL+ D
Sbjct: 217 TAQYDKQLTESQGLNYISVSWSMSPHNYHLAKFSLSSYDSS------------------- 257
Query: 352 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGL 411
+L GD ++ D +K + W G
Sbjct: 258 ----------------------------NLKIAVGDEIILHYDGIK-------EEKWQGS 282
Query: 412 GHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQS 470
G+VIK+P + + LEL+ SS PTE GF + +WK SF RMQ AL FA + +S
Sbjct: 283 GYVIKLPATYSEGFTLELQPSSVKPPTEHNVGFRAEIVWKGISFQRMQAALTTFA-EKKS 341
Query: 471 VSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGT 530
+S +Y LLGH ++ F LP+ S PN LN SQV AVK +Q+ LSLIQGPPGT
Sbjct: 342 ISKDLYDILLGHKEEQPEFTAKLPEAISVPNFTQLNPSQVNAVKSVLQQRLSLIQGPPGT 401
Query: 531 GKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV 590
GKTVTSATIVY L K VLV A SNIAVD L K+ GLKVVRV A+SRE ++S +
Sbjct: 402 GKTVTSATIVYHLAKSKKKKVLVTASSNIAVDHLASKLEDIGLKVVRVTARSRENVESAI 461
Query: 591 SFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCT 650
L+L + + N N LKKLL+ K+E G LS D Y K AE +L A V+CCT
Sbjct: 462 DHLSLSSLVSNTN-NPVLKKLLKKKDELGSLSKKDMNIYISQTKKAEAEILAEAHVVCCT 520
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
C GAGD RL IKF +LIDES Q +EPE ++P++ GAKQ+ILVGDH QLGPV++ AA
Sbjct: 521 CSGAGDKRLANIKFPYVLIDESTQPSEPESLIPIVKGAKQVILVGDHQQLGPVILHNGAA 580
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
+AGL QSLFERL+ LG P RLEVQYRMHP LS+FPSN FY+GSLQNGV ++R + +
Sbjct: 581 KAGLRQSLFERLIKLGHIPIRLEVQYRMHPSLSEFPSNMFYDGSLQNGVSHEQRLIRRSS 640
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
FPWP P P+LF+ + G EEI+ SGTS++NR+EA N EKI +R + G+KP QIGVITPY
Sbjct: 641 FPWPAPGIPLLFWSSYGTEEISISGTSFLNRSEAMNCEKIISRLLSEGIKPHQIGVITPY 700
Query: 831 EGQRAFLVQHMQYQGSLPAK-IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
+GQR ++VQ++ G+ P + IYQ++EVASVDAFQGREKD II SC RSN IGFL D
Sbjct: 701 QGQRDYIVQYLLMNGAHPDREIYQDVEVASVDAFQGREKDFIIFSCTRSNHTNTIGFLKD 760
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLK 941
RRLNVA+TRAKYG+ V+GN K L K PLWN LL ++++ LVEG L++ +
Sbjct: 761 ARRLNVAITRAKYGLFVLGNIKTLQKDPLWNRLLVHFRDKGALVEGRLDSFQ 812
>gi|145499757|ref|XP_001435863.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402999|emb|CAK68466.1| unnamed protein product [Paramecium tetraurelia]
Length = 928
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/874 (44%), Positives = 549/874 (62%), Gaps = 80/874 (9%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
++C+YC D V C CK+W+CN SGSHII HL+++KH +++LH+ + T
Sbjct: 21 YSCEYCLQSDVNAVAQCLQCKRWYCNC-ATKSGSHIILHLIKSKHSQISLHEQNKVQITT 79
Query: 160 LECYTCGVRNIFVLGFIPAKADSV--VVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSF 217
+ECY C +N+F LG + + D +++LCR C + WD ++PLI D+
Sbjct: 80 IECYICEQKNMFTLGQVNVRVDEEENILILCRG-CLPLKQSDKITWDSNDYEPLIRDKCI 138
Query: 218 LSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYED 277
WL+ + E+ R VT +I + EE K + F+D ++ G ++ +V LRY D
Sbjct: 139 KEWLL---GQGEKLNSRMVTLERINQYEEERKQKPQLKFEDFDRKGPNQQLKEVQLRYRD 195
Query: 278 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQ 337
YQ +F PLVKLE + DK++KE Q ++V V+WD+ L KK +AYF
Sbjct: 196 ANHYQQVFSPLVKLEEEQDKQVKEGQVLQSVKVKWDLSLKKKRLAYF------------- 242
Query: 338 NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELK 397
++G + + D +QG E++
Sbjct: 243 -LYG----------------------------------------GREEFDTNTLQGSEMQ 261
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRM 457
L + W G V+K+ +N +E+ LEL + P G++V+ IW ST+F RM
Sbjct: 262 LSLK-SGNSIWQSKGTVVKVINN--EEICLELHQNDPPPNNTDEGYTVECIWVSTTFKRM 318
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC---HLPKHFSAPNLPDLNRSQVYAVK 514
Q+ L+ F +++ S S YIY +LG +D + ++P+ SAPNLPDLN Q AVK
Sbjct: 319 QIGLKTFNLNESSTSNYIYKMILGR-IDTLAPPTKVENIPQKLSAPNLPDLNVYQADAVK 377
Query: 515 HAIQRPLSLIQGPPGTGKTVTSATIVYQLV------KQTGSPVLVCAPSNIAVDQLTEKI 568
A++ PLSLIQGPPGTGKTVTSATIV+QLV KQ G +LVCAPSNI VDQL EKI
Sbjct: 378 KALKSPLSLIQGPPGTGKTVTSATIVHQLVKALEKQKQRGQ-ILVCAPSNIVVDQLAEKI 436
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS--ELKKLLQLKEETGELSSADE 626
++TG+KVVR+C+K+RE++ + + FL LHNQ+R++++ +L+ +L ++ GEL DE
Sbjct: 437 NKTGVKVVRLCSKTRESVSTTIEFLTLHNQVRSLDIPQYHQLQMFYELMDQQGELDQKDE 496
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
+ + ++ AEK +++ ADVIC TC+G+ D RL ++F +LIDE+ QA EPEC++P+I
Sbjct: 497 QVFIRMRDEAEKEIIEQADVICTTCIGSADKRLKDMRFPFVLIDEATQAIEPECLLPMIK 556
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
GA+ +ILVGDH QLGPVV ++AA GL +SLFERLV LGIRP RL+VQYRMHPEL+ FP
Sbjct: 557 GAQHVILVGDHRQLGPVVQSREAASVGLDRSLFERLVQLGIRPVRLQVQYRMHPELTVFP 616
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN 806
SN FYEG+LQNGV +R S +FPWP KPM+F QGQE+++ SGTSY+N EA
Sbjct: 617 SNTFYEGTLQNGVTISDRTHSG-NFPWPNKQKPMIFINVQGQEQLSASGTSYLNTQEAVA 675
Query: 807 VEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGR 866
VE+ + +K +IG+ITPY+GQR +++ ++Q G LP Y++IEVASVD FQGR
Sbjct: 676 VEQAVYYLYQNTVKLNKIGIITPYKGQRTYIISYLQRNGQLPYNQYRDIEVASVDGFQGR 735
Query: 867 EKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFY 926
EKD II+SCVRSND QGIGFL +PRRLNV +TRA++G+I+IGN +VL K LWNN+LN +
Sbjct: 736 EKDFIIISCVRSNDTQGIGFLTNPRRLNVTITRARFGLIIIGNARVLCKDNLWNNMLNHF 795
Query: 927 KEQKVLVEGPLNNLKESLILFSKPKQYF--KKNN 958
K+ +L+EG L NLK S + F P+++ ++NN
Sbjct: 796 KDLDLLMEGSLPNLKPSSMKFRPPQKFIPERRNN 829
>gi|145491971|ref|XP_001431984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399091|emb|CAK64586.1| unnamed protein product [Paramecium tetraurelia]
Length = 935
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/886 (44%), Positives = 547/886 (61%), Gaps = 89/886 (10%)
Query: 96 ELPPHACK---------YCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKE 146
++ H+C+ YC D V C CK+W+CN SGSHII HL++ KH +
Sbjct: 17 QVAEHSCEQVVERLLFSYCLQSDVNAVAQCLTCKRWYCNS-ATKSGSHIILHLIKNKHSQ 75
Query: 147 VTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQE 206
++LH + T +ECY C +N+F LG + +++LCR C L ++ WD
Sbjct: 76 ISLHSKNKVEITTIECYGCEQKNLFTLGQVNGTNKENILILCRG-CLPLRQLGEITWDSN 134
Query: 207 QWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDE 266
++PLI D+S WL+ + ++ R VT +I + EE K F DL++ G
Sbjct: 135 DYQPLIKDKSIQEWLL---GQGDKINSRMVTLERINQYEEERKKKEGLKFDDLDRKG--- 188
Query: 267 DPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL 326
P+Q +LKE V +R+
Sbjct: 189 -PNQ---------------------------QLKE------VQLRYK------------- 201
Query: 327 AKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA-KTD 385
D YQ +F PLVKLE + DK++KE Q ++V V+WD+ L KK +AYF + +
Sbjct: 202 -----DANHYQQVFSPLVKLEEEQDKQVKEGQVVQSVKVKWDLSLKKKRLAYFLYGGREE 256
Query: 386 GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSV 445
D + G E++L + + W G VIK+ +N +E+ LEL + P G++V
Sbjct: 257 FDTNTLLGSEMQLSLK-NGNYNWQSKGTVIKVINN--EEICLELHQNDPPPNNIEEGYTV 313
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC---HLPKHFSAPNL 502
+ IW ST+F RMQ+ L+ F S S Y+Y +LG +D + +P+ SAPNL
Sbjct: 314 ECIWVSTTFKRMQIGLKTFLTQSSSTSNYLYKMILGR-IDTLAPPTAVESIPQKLSAPNL 372
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK------QTGSPVLVCAP 556
PDLN Q AVK A++ PLSLIQGPPGTGKTVTSATIVYQLVK Q G +LVCAP
Sbjct: 373 PDLNVYQADAVKKALKSPLSLIQGPPGTGKTVTSATIVYQLVKAMEKQKQRGQ-ILVCAP 431
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS--ELKKLLQL 614
SNI VDQL EKI++TG+KVVR+C+K+RE++ + + FL LH+Q+R++++ +L+ +L
Sbjct: 432 SNIVVDQLAEKINKTGVKVVRLCSKTRESVSTNIEFLTLHSQVRSLDIPQYHQLQAFYEL 491
Query: 615 KEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
++ GEL DE+ + ++ AEK +++ AD+IC TC+G+ D RL +++F +LIDE+ Q
Sbjct: 492 LDQQGELDQKDEQVFIRMRDEAEKEIIEQADIICTTCIGSADKRLKEMRFLFVLIDEATQ 551
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEV 734
A EPEC++P++ GAK +ILVGDH QLGPVV ++AA GL +SLFERLV LGIRP RL+V
Sbjct: 552 AIEPECLLPMLKGAKHVILVGDHRQLGPVVQSREAASVGLDRSLFERLVQLGIRPVRLQV 611
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
QYRMHPEL+ FPSN FYEG+LQNGV +R S +FPWP KPM+F GQE+++ S
Sbjct: 612 QYRMHPELTVFPSNTFYEGTLQNGVTISDRTHSG-NFPWPNKQKPMIFINVTGQEQLSAS 670
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
GTSY+N EA VE+ + +K +IG+ITPY+GQR +++ ++Q G LP Y++
Sbjct: 671 GTSYLNTQEAVAVEQAVYYLYQNTVKLNKIGIITPYKGQRTYILSYLQRNGQLPYNQYRD 730
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
IEVASVD FQGREKD II+SCVRSND QGIGFL +PRRLNV +TRA+YG+IVIGN +VLS
Sbjct: 731 IEVASVDGFQGREKDFIIISCVRSNDTQGIGFLTNPRRLNVTITRARYGLIVIGNARVLS 790
Query: 915 KQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYF--KKNN 958
K LWNN+LN +K+ +L+EG L NLK S + F P+++ ++NN
Sbjct: 791 KDNLWNNMLNHFKDLDLLMEGSLPNLKSSQMKFRPPQKFIPERRNN 836
>gi|340504626|gb|EGR31053.1| upf1 regulator of nonsense transcripts, putative [Ichthyophthirius
multifiliis]
Length = 928
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/842 (45%), Positives = 523/842 (62%), Gaps = 79/842 (9%)
Query: 138 HLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVV-VLLCRTPCAAQN 196
HLV++KHKEV LH D P +T +ECY C +NI++LG + K + +++CR PC Q
Sbjct: 2 HLVKSKHKEVQLHPDSPQYDTAIECYICENKNIYLLGLVHLKNNEEQGLIICRQPCLNQK 61
Query: 197 SLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATF 256
DM W+ E+W PLI ++ ++WLV P+ ++ Q+G Q T QI + EE K N
Sbjct: 62 RYGDMVWEIEKWNPLIDEKVLVNWLVPSPSVKQMQKGFQATQKQIFEYEEQIKTNPNYKL 121
Query: 257 QDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGL 316
G + QVLL +Y+N
Sbjct: 122 AQGALQGQTKKLKQVLL------RYKN--------------------------------- 142
Query: 317 NKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 376
G Y F L++ EA+YD+ LKE +++VRWD L + +
Sbjct: 143 ----------------GKHYFQTFYDLIEAEANYDQSLKEKLHYNSISVRWDTSLKNRKV 186
Query: 377 AYFSLAK-TDGDMRLMQGDELKLRYSYDASKT----WSGLGHVIKIPDNFGDEVGLELKS 431
AY L + + + L+ G ELK+ Y + W G ++K+ N DEV +EL
Sbjct: 187 AYVILPQGEENEFNLLSGSELKIIYKKMKKEANEEDWIAKGTIVKVGQN--DEVVIELSH 244
Query: 432 SAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL--F 489
+ G++++F+WK T+ R++ ++KF D+Q +S+++Y +LGH E +
Sbjct: 245 HVKETPPSGKGYTIEFVWKHTAVKRIKKGIKKFWQDEQCISSFLYFSILGHQNQEDMPTL 304
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV---KQ 546
LP+ +S PN+P+LN QV AVK A+Q+PL LIQGPPGTGKT TS I+Y LV K+
Sbjct: 305 TIDLPQTYSLPNMPELNYYQVEAVKKALQQPLCLIQGPPGTGKTFTSTAIIYHLVQNIKR 364
Query: 547 TG--SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM 604
TG +LVCAPSNI VDQL E++H GLKVVR+C+KSRE + S V FL LHNQ+R++
Sbjct: 365 TGQRGQILVCAPSNIVVDQLAERMHYAGLKVVRMCSKSREMVSSSVEFLTLHNQVRSLGH 424
Query: 605 NS--ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
E++KLL L E+ GEL DE Y LK+ EK +L NA+VIC TC+ + DPRL +
Sbjct: 425 GEYEEMQKLLTLMEDQGELDHQDEDVYYSLKRQGEKEILQNAEVICSTCISSADPRLKEF 484
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
+F +LIDE+ QA EPEC++P++ GAK ILVGDH QLGPVV C+ A AGL++SLFERL
Sbjct: 485 RFKHVLIDEATQAIEPECLLPLLKGAKHAILVGDHRQLGPVVTCRDTANAGLNKSLFERL 544
Query: 723 VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
V +G+RP RL+VQYRMHP+LS FPSN FYEG+L NGV ++R+ DFPWP +KP++F
Sbjct: 545 VSMGVRPTRLQVQYRMHPDLSIFPSNTFYEGTLLNGVTFNDRQFHG-DFPWPNKNKPLMF 603
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
+ G EEI+ SGTSY+NR E +E+I + I+ ++P+QIG+ITPY+GQR ++ ++Q
Sbjct: 604 LNSCGVEEISSSGTSYLNRQETMLIEEIVYKLIKGKVRPDQIGIITPYKGQRFYIGDYLQ 663
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
G L +YQEIE SVD FQGREKD II+SCVRSN+ QGIGFL D RRLNVA+TRA+Y
Sbjct: 664 KNGKLNPTLYQEIECCSVDGFQGREKDYIIISCVRSNESQGIGFLTDARRLNVAITRARY 723
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQY------FKK 956
G+I++GN KVL++ LWNNLLNF KE KVLV+G LN+L++ + F ++Y F+K
Sbjct: 724 GLIIVGNAKVLARDNLWNNLLNFMKESKVLVDGNLNDLRQCNLKFRPSQKYVPERSDFQK 783
Query: 957 NN 958
NN
Sbjct: 784 NN 785
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/548 (61%), Positives = 432/548 (78%), Gaps = 10/548 (1%)
Query: 406 KTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFA 465
K W G GHV+++ ++ EV LE++SS P E T G+ VDF+WKSTSFDRMQ A++ FA
Sbjct: 5 KDWEGTGHVLRLEES---EVALEMRSS-NVPIEITDGYLVDFVWKSTSFDRMQAAMKTFA 60
Query: 466 VDDQSVSAYIYHRLLGHNVDEVLFRC--HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 523
VDD S++ Y+YH++LGH+V R + HFSAP LP+LN Q+ AVK +++PLSL
Sbjct: 61 VDDTSLTGYLYHKILGHDVGVQALRIPRSVGTHFSAPGLPELNTFQMEAVKGVLEQPLSL 120
Query: 524 IQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR 583
IQGPPGTGKTVTSA+IV+ + KQ VLV APSNIAVD LT KI TGL+VVR+ AKSR
Sbjct: 121 IQGPPGTGKTVTSASIVFHMSKQNMGQVLVTAPSNIAVDHLTMKISATGLRVVRLAAKSR 180
Query: 584 EAIDSPVSFLALHNQIRNMEM--NSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
EA+ S V L+LH I++++ ++L+KL+QLK++ GELSS DEKR++ LK+ AE+ +L
Sbjct: 181 EAVASSVEHLSLHAMIKSLDSPDKADLRKLMQLKDDIGELSSQDEKRFKSLKRQAEREIL 240
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLG 701
ADVIC TCVGAGDPRL +F +LIDE+ QATEPEC++P++ GAK +++VGDH QLG
Sbjct: 241 QAADVICTTCVGAGDPRLSNFRFRQVLIDEATQATEPECLIPIVQGAKHVVMVGDHRQLG 300
Query: 702 PVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGV 759
PVVM KKAA+AGL+ SLF+RLV RPFRL VQYRMHP LS+FPSN FYEG LQNGV
Sbjct: 301 PVVMNKKAAKAGLNNSLFDRLVKSDTKHRPFRLRVQYRMHPFLSEFPSNEFYEGDLQNGV 360
Query: 760 CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGM 819
A ER+LS +DFPWP P+KP FY+ G EEI+ SGTSY+NRTEASNVEKI T F++ G+
Sbjct: 361 AASERQLSSVDFPWPNPNKPTFFYICLGAEEISSSGTSYLNRTEASNVEKIVTTFLKAGV 420
Query: 820 KPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN 879
P QIGVITPYEGQRA++V +MQ G L +++Y+++EVASVD+FQGREKDLII+SCVRSN
Sbjct: 421 LPSQIGVITPYEGQRAYVVSYMQRNGPLRSQLYKDVEVASVDSFQGREKDLIILSCVRSN 480
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN 939
++QGIGFL+D RRLNVALTRAKYG+I++GNP+VL+KQ LWN LLN Y++ ++++EGPLNN
Sbjct: 481 ENQGIGFLSDERRLNVALTRAKYGVILLGNPRVLAKQTLWNKLLNHYRDNQLIMEGPLNN 540
Query: 940 LKESLILF 947
L S + F
Sbjct: 541 LTPSHMQF 548
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/630 (56%), Positives = 449/630 (71%), Gaps = 20/630 (3%)
Query: 346 LEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG----------------DMR 389
+EA+ ++ KE+ +Q+N+TVRW G + + IAYF +K G +++
Sbjct: 1 MEAESLRQSKEAYSQQNITVRWGFGPDGQRIAYFVFSKILGTGRILHKLYMQHLNVCEVK 60
Query: 390 LMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAP-TEATTGFSVDFI 448
LM GDEL L ++ K W G V+K+PD FG+EV ++L ++ AP T G+SV F
Sbjct: 61 LMAGDELILNSDFNG-KVWKASGRVMKVPD-FGEEVAIQLMNANDAPPCYVTNGYSVHFG 118
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 508
+S DRM ALRK +D VS I +LGH+ + P H+SAP LP+LN S
Sbjct: 119 LRSAYIDRMLTALRKLTKED-FVSHAIQRTILGHDYEAPPLDISYPNHYSAPGLPELNHS 177
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
QV AV+ + R +SLIQGPPGTGKTVTSA+IVY L K G+P+LVC+PSN+A+DQL EKI
Sbjct: 178 QVMAVREVLTRSISLIQGPPGTGKTVTSASIVYHLAKARGTPILVCSPSNVAIDQLAEKI 237
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR 628
RTGL+V+R CAKSRE IDSPV FL LH Q+R + EL KLLQ+KEETGELS +E R
Sbjct: 238 SRTGLRVIRTCAKSREKIDSPVGFLTLHQQVRRLVEKEELGKLLQVKEETGELSPVEENR 297
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
+ LK E+ LL ADVICCTCV AGD RL IKF ++LIDES QA EPEC++P++ GA
Sbjct: 298 FSSLKLKYERELLKKADVICCTCVAAGDSRLAAIKFRAVLIDESTQAKEPECLIPIVTGA 357
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
+Q++LVGDHCQLGPVV+C++AARAGL++SLFERLV+LG +P RL+VQYRMHP LS PSN
Sbjct: 358 RQVVLVGDHCQLGPVVICEEAARAGLNRSLFERLVILGNQPIRLQVQYRMHPLLSLLPSN 417
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FYEG+LQNGV ER L DF WP P PM F+ T QEE SG S++NR EA+++E
Sbjct: 418 LFYEGTLQNGVTEQERILEAGDFRWPNPTVPMFFWCTLSQEEKPRSGKSFLNRAEAAHIE 477
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
KI T+F+R G++ +QIG+ITPYE QRA +V+HM + G L K+YQEIEVASVDAFQGREK
Sbjct: 478 KIATKFLRSGVRADQIGIITPYEAQRAHIVKHMLHSGPLNNKLYQEIEVASVDAFQGREK 537
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D+I++SCVRSN IGFLND RRLNVALTRA+YG+I++GNPKVLS QP+WN+LL F +E
Sbjct: 538 DIILLSCVRSNKDNKIGFLNDSRRLNVALTRARYGLIIVGNPKVLSHQPMWNSLLRFCRE 597
Query: 929 QKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
L+ GPLN LKE + F+K K N
Sbjct: 598 NHCLLHGPLNALKEYKVDFNKGKSNLPVTN 627
>gi|380478203|emb|CCF43724.1| ATP-dependent helicase NAM7, partial [Colletotrichum higginsianum]
Length = 555
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/640 (54%), Positives = 433/640 (67%), Gaps = 91/640 (14%)
Query: 241 IAKLEEVWKDNAEATFQDLEKPG-VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRL 299
IAKLEE+WK+NA AT DLEK +D+DPH VLL+ YD
Sbjct: 2 IAKLEEMWKENATATVADLEKAASIDDDPHPVLLK--------------------YD--- 38
Query: 300 KESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQT 359
D Y YQNIFGPLVK+E+DYDK+LKE+Q+
Sbjct: 39 --------------------------------DPYHYQNIFGPLVKMESDYDKKLKEAQS 66
Query: 360 QENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIP 418
++ +TVRWD GLN K + F L K + GD++L GDE++LRY + W G+G+VIKIP
Sbjct: 67 EDGLTVRWDYGLNNKHLVSFELHKIESGDVKLAVGDEMRLRYKGELRPAWEGVGYVIKIP 126
Query: 419 DNFGDEVGLELKSSAG---APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYI 475
+N DEV LEL+ + PTE T FS D++WK+TS+DRMQ A++ FAVDD SVS YI
Sbjct: 127 NNQSDEVTLELRKAGNEKQVPTECTHNFSADYVWKATSYDRMQYAMKTFAVDDMSVSGYI 186
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVT 535
+H+LLGH+V + +PK FS P LPDLN SQ+ A+K + PLSLIQGPPGTGKTVT
Sbjct: 187 FHKLLGHDVAVAPMKTTMPKKFSVPGLPDLNTSQIAAIKAVLSTPLSLIQGPPGTGKTVT 246
Query: 536 SATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLAL 595
SATI+Y L K VLVCAPSN+AVDQL E+IHRTGLKVVR+ AKSRE ++S
Sbjct: 247 SATIIYHLCKMNNGQVLVCAPSNVAVDQLCERIHRTGLKVVRLTAKSREDVES------- 299
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG 655
LSS DEK+++ L K AE+ +L NADV+CCTCVGAG
Sbjct: 300 ------------------------SLSSQDEKKFKQLTKAAERDILHNADVVCCTCVGAG 335
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
DPRL K+KF ++LIDES Q+ EPECM+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+
Sbjct: 336 DPRLSKMKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLN 395
Query: 716 QSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
QSLFERLV L + P RL +QYRMHP LS+FPSN FY+GSLQNGV +R +DFPWPV
Sbjct: 396 QSLFERLVNLRLVPIRLNIQYRMHPCLSEFPSNMFYDGSLQNGVTVKDRVRRDVDFPWPV 455
Query: 776 PDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRA 835
D PM+F+ G EEI+ SGTSY+NRTEASNVEK+ TRF + G+KP IGVITPYEGQR+
Sbjct: 456 VDMPMMFWSNLGNEEISASGTSYLNRTEASNVEKVVTRFFKAGVKPLDIGVITPYEGQRS 515
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
++V MQ G+ + Y+E+EVASVDAFQGREKD I++SC
Sbjct: 516 YIVSTMQNTGTFKKESYKEVEVASVDAFQGREKDFIVLSC 555
>gi|163915642|gb|AAI57562.1| LOC100135270 protein [Xenopus (Silurana) tropicalis]
Length = 587
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/392 (79%), Positives = 352/392 (89%)
Query: 567 KIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADE 626
KIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNME EL+KL QLK+ETGELSSADE
Sbjct: 1 KIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMESMPELQKLQQLKDETGELSSADE 60
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
KRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+L
Sbjct: 61 KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVL 120
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
GAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FP
Sbjct: 121 GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFP 180
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN 806
SN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+N
Sbjct: 181 SNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAAN 240
Query: 807 VEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGR 866
VEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGR
Sbjct: 241 VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 300
Query: 867 EKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFY 926
EKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+Y
Sbjct: 301 EKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYY 360
Query: 927 KEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
KEQKVLVEGPLNNL+ESL+ FSKP++ N
Sbjct: 361 KEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 392
>gi|313231475|emb|CBY08589.1| unnamed protein product [Oikopleura dioica]
Length = 1109
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/649 (54%), Positives = 439/649 (67%), Gaps = 89/649 (13%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MS +GPSSQTLTF +++E LIGG TQ ++++FTDFT+PSQSQ+ ASQ + +
Sbjct: 1 MSSVDFGPSSQTLTFNESDE--LIGGGTQATDYEFTDFTMPSQSQSLASQ----DYDGLG 54
Query: 61 GKQNLDNSNLNLVSQKLHELQFEEE-EDDGNEF----------------FNKELPPHACK 103
GK + L SQ + E +FE++ DD N+ K+LP HAC
Sbjct: 55 GK-----TPRGLGSQIIEEDEFEDQLADDINDLQFKEDDEDVDDYIDSIVAKDLPEHACA 109
Query: 104 YCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECY 163
YCGIHDP YV+ C + KKWFCNGRG TSGSHIINHLVRAK KEV+LHK G LG+TVLEC+
Sbjct: 110 YCGIHDPMYVVRCQLTKKWFCNGRGTTSGSHIINHLVRAKCKEVSLHKGGQLGDTVLECF 169
Query: 164 TCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVK 223
+CG RNIF+LG+IPAK DSVVVLLCRTPCAAQ + WD +W P+I DR+FLSW+VK
Sbjct: 170 SCGCRNIFLLGYIPAKGDSVVVLLCRTPCAAQAKKEKDKWDASEWAPIIQDRAFLSWIVK 229
Query: 224 VPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQN 283
VP++ EQ R RQ+++ Q+ KLEE+WKD +AT D+ + V D Q
Sbjct: 230 VPSDGEQSRARQISAQQMNKLEELWKDQPDATVDDILRGNVAVDDVQ------------- 276
Query: 284 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPL 343
+V++R+ D YQYQNIFGPL
Sbjct: 277 -----------------------SVSLRYQ------------------DAYQYQNIFGPL 295
Query: 344 VKLEADYDKRLKESQTQENVT-VRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSY 402
+ EADYDK+ KESQTQ +T VRWD LNK+ +AY +L KTD +MRLM GDE++LR
Sbjct: 296 ILREADYDKKTKESQTQNAITNVRWDTALNKRKVAYMNLPKTDSEMRLMCGDEVRLRL-- 353
Query: 403 DASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPT-EATTGFSVDFIWKSTSFDRMQLAL 461
S+ W GHV+K+PDNFGDE+ LEL+S+ A E + GFS++FIWKSTSFDRMQ AL
Sbjct: 354 -PSENWESTGHVVKVPDNFGDEIALELRSNVPAGILETSRGFSLEFIWKSTSFDRMQAAL 412
Query: 462 RKFAVDDQSVSAYIYHRLLGHNVDEVLFRC-HLPKHFSAPNLPDLNRSQVYAVKHAIQRP 520
+ FAVD+ SVS Y+YH+LLG++++E + LP+ FSAP LPDLN SQ YAVK +Q+P
Sbjct: 413 KAFAVDESSVSGYLYHKLLGNDIEEQNLKIPSLPRRFSAPGLPDLNHSQAYAVKTVLQKP 472
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTG-SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC 579
LSLIQGPPGTGKTVTSAT+VY LVK T VLVCAPSNIAVDQLTEKIH+TGLKVVR+C
Sbjct: 473 LSLIQGPPGTGKTVTSATLVYHLVKSTEMGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLC 532
Query: 580 AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR 628
AKSRE +DS V L+LHNQ++++ EL+KL +LK E GEL+ DEKR
Sbjct: 533 AKSRENVDSTVGSLSLHNQVKSLNEQRELRKLCELKSEMGELAPNDEKR 581
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
TRA+YG+I++GNPK LS+ +WNNLL ++K+ LVEGPLN+L+ES I F KP+
Sbjct: 870 TRARYGVIIVGNPKALSRHSMWNNLLTYFKDNHTLVEGPLNDLRESAIQFVKPR 923
>gi|68064751|ref|XP_674359.1| regulator of nonsense transcripts [Plasmodium berghei strain ANKA]
gi|56492877|emb|CAI02490.1| regulator of nonsense transcripts, putative [Plasmodium berghei]
Length = 720
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/778 (44%), Positives = 472/778 (60%), Gaps = 129/778 (16%)
Query: 135 IINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC-- 192
I+ HLVR+KHKE+ LHK+ LGET+LECY CG RN+F+LGF+P + VV+++CR PC
Sbjct: 1 IVTHLVRSKHKEIKLHKNSILGETILECYNCGCRNVFLLGFLPTLEEGVVIIICRDPCLG 60
Query: 193 ----------------------------------AAQNSLKDMNWDQEQWKPLIADRSFL 218
++ +K+ N E+W+P+I DR FL
Sbjct: 61 YYISINNKNGKNGKNDKNDKKMMKKEISSQDEESEGESKIKECNL--EKWQPVIEDRCFL 118
Query: 219 SWLVKVP-TEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYED 277
WLV +P E +++G+ TS + KLEE WK+ + +L+
Sbjct: 119 EWLVNIPRKEDAEKKGKLTTSVNVNKLEEFWKNKKDVYINELD----------------- 161
Query: 278 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQ 337
+K+ D K++K T D Y+
Sbjct: 162 -----------LKILDDEPKKVKLKYT---------------------------DAIDYK 183
Query: 338 NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELK 397
F PL++LE++YDK +KE Q NV +RWDVGLNKK A+F K + ++R++ GDELK
Sbjct: 184 LTFSPLIELESNYDKSIKEGHKQTNVRIRWDVGLNKKRYAHFVYIKEESELRIVIGDELK 243
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK--SSAGAP--TEATTGFSVDFIWKSTS 453
+ Y Y WS GH+ ++ N +E+ LELK + P TGF V+F+WKST+
Sbjct: 244 ISYVYPNGDIWSCEGHISRL--NTNEEIALELKVLYNIDGPWNYNINTGFVVEFVWKSTA 301
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHRLLGHNV-DEVL------------------------ 488
+DRMQLAL +FA + S+S Y+YH+LLGH++ DE +
Sbjct: 302 YDRMQLALNEFAFNSFSLSGYLYHKLLGHDIIDEPIDYNKKELSLNNDNKRYNYNKKTND 361
Query: 489 -FRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK-Q 546
+ ++SAPNL LN SQ+ A++ ++ PLSLIQGPPGTGKT+T AT+VY + K +
Sbjct: 362 NLSTYKIVNYSAPNLAPLNHSQIDAIQKSLNSPLSLIQGPPGTGKTLTCATLVYHMHKTK 421
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN- 605
G VLV APSN+AVDQL+ +IHRTGLKVVR+CA+SRE++ S +L LHNQ++ ++ N
Sbjct: 422 MGGKVLVTAPSNVAVDQLSVRIHRTGLKVVRLCARSRESVSSIADYLYLHNQVKLLKTNI 481
Query: 606 -SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF 664
EL KLL+LKEE GELS DE R + L +AE +L ADVIC TCVGA D RL K +F
Sbjct: 482 GEELNKLLELKEEVGELSQKDENRLKKLILHAEYKILIEADVICTTCVGAMDKRLKKFRF 541
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
+ +L+DE+ Q+TEPEC+VP++ GAKQ++LVGDHCQLGP+++CKKAA +GL +SLFERL++
Sbjct: 542 NQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIVCKKAASSGLGKSLFERLMM 601
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
LGI PFRLEVQYRMHP LS+FPS FY+G LQNG+ ER+ +FPWP PM FY
Sbjct: 602 LGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLKNFPWPNSKYPMFFYN 661
Query: 785 TQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
+ G EE++ SGTSY+NR EA N+E + + G+K QIGVITPYEGQRA+++ +
Sbjct: 662 SNGLEEMSASGTSYLNRNEAQNMEILVRALLNSGLKATQIGVITPYEGQRAYILHFFK 719
>gi|414590337|tpg|DAA40908.1| TPA: hypothetical protein ZEAMMB73_069756 [Zea mays]
Length = 726
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/653 (51%), Positives = 420/653 (64%), Gaps = 116/653 (17%)
Query: 87 DDGNEFFNKELPPHACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKH 144
+DG ++ + HAC+YCGIH+PA V CN+ C+KWFCN RG+TSGSHI+NHLVRAKH
Sbjct: 143 EDGYDYSKGDFVEHACRYCGIHNPACVARCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKH 202
Query: 145 KEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
KEV LHKD PLGET+LECY CG CR
Sbjct: 203 KEVCLHKDSPLGETILECYNCG---------------------CRN-------------- 227
Query: 205 QEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
VP+EQEQ R RQ+++ QI K+EE+WK N +A+ +DLEKPGV
Sbjct: 228 -------------------VPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGV 268
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
D++P V+L+YED YQYQN+F PL+KLEADYDK +KESQ+++NVTVRWD+GLNKK +AYF
Sbjct: 269 DDEPQPVVLKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRVAYF 328
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW-DVGLNKKSIAYFSLAK 383
K D + ++L + RL+ + T W VG K A +A
Sbjct: 329 VFPKEDNE-----------LRLVPGDELRLRYPGDSSHPT--WQSVGHVIKLTAQEEVAL 375
Query: 384 TDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGF 443
++R QG +L + W
Sbjct: 376 ---ELRASQGVPTELNVGFSVDFVW----------------------------------- 397
Query: 444 SVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 503
KSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP
Sbjct: 398 ------KSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLP 451
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LN SQV AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ VLVCAPSN+AVDQ
Sbjct: 452 ELNASQVLAVKSVLQKPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 511
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SELKKLLQLKEETGEL 621
L EKI TGLKVVR+CAKSREA+ SPV L LH Q+R+++ + SEL KL QLK+E GEL
Sbjct: 512 LAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSELHKLQQLKDEQGEL 571
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
SS+DEK+Y+ LK+ E+ +L +ADVICCTCVGAGDPRL +F +LIDES QATEPEC+
Sbjct: 572 SSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECL 631
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEV 734
+P++LG KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+LG++PFRL+V
Sbjct: 632 IPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFRLQV 684
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 316/617 (51%), Positives = 426/617 (69%), Gaps = 7/617 (1%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRL 390
D +YQ+++ PLV+ EA DK +KES+ ++++V W + + A F ++ + ++ +
Sbjct: 259 DALEYQHVWAPLVEAEAACDKFMKESRVLDHLSVTWGTVASGRHTASFIVSTYETSELHV 318
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWK 450
GDE+ L + + WSG G ++ +P D +EL+ S P +ATTGFS + +WK
Sbjct: 319 AVGDEVVLHHRDFGAAEWSGAGVLVAVPGARTDIYTVELQPSV-VPPQATTGFSAEIVWK 377
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
T + RMQ AL +FA ++SVSAY+YH++LGH+V EV F + LN SQ
Sbjct: 378 GTPYQRMQHALFRFATSNESVSAYVYHKILGHDVVEVEFDGE--NSLNNKRCSALNASQR 435
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AV HAI PL+LIQGPPGTGKTVTSA IV +LV+ S VLVCAPSN+AVD L K+
Sbjct: 436 AAVAHAIASPLTLIQGPPGTGKTVTSAAIVRELVRLRRSRVLVCAPSNVAVDHLALKLRA 495
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYR 630
GLKVVR+ A+SRE I+S + LALH Q+R + ++ L+ + GEL + + R
Sbjct: 496 AGLKVVRLAARSREDIESEATPLALHTQVR-AAIPRRVRTLVDKQASGGELDARAKARIA 554
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
+ AE+ L+ +ADVIC TCVGA D RL + +F +L+DES QATEPE ++P+ GAKQ
Sbjct: 555 RSWRAAEQKLISSADVICTTCVGADDRRLEEYEFPIVLVDESTQATEPEALIPITRGAKQ 614
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
++LVGDH QLGPVV+ A+ AGL +SLFERLV +G P RLEVQYRMHP LS+F SN F
Sbjct: 615 VVLVGDHQQLGPVVLDPAASAAGLRRSLFERLVSMGHVPLRLEVQYRMHPALSEFASNMF 674
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSL NGV +D+R DFPWPVPD+PM+F+ G+EEI +G+SY+NR EA NV+KI
Sbjct: 675 YEGSLLNGVTSDDRTRPGADFPWPVPDRPMMFWANYGKEEIGANGSSYLNRVEAMNVDKI 734
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ--EIEVASVDAFQGREK 868
R +R G+ P+QIGVITPYEGQR ++ Q+++ ++P E+EV+SVDAFQGREK
Sbjct: 735 IARLVRDGVSPDQIGVITPYEGQRVYIWQYLKLNSTVPKSALNELEVEVSSVDAFQGREK 794
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D II+SCVR+N+ + IGFL D RRLNVALTRAK+G+I++GNP+ LSK LWN+LL Y+E
Sbjct: 795 DYIILSCVRANEDRDIGFLKDSRRLNVALTRAKFGLIILGNPRSLSKNKLWNSLLVHYRE 854
Query: 929 QKVLVEGPLNNLKESLI 945
+ LVEGPL+NL SL+
Sbjct: 855 RGCLVEGPLDNLNLSLV 871
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 136/242 (56%), Gaps = 10/242 (4%)
Query: 84 EEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAK 143
E E DG E P AC YC DPA + C C++WFCNG +GSHI+ HLV +K
Sbjct: 74 ESEKDGEHDHEAE-PTEACSYCSTSDPASLARCGTCQRWFCNGSSSKAGSHIVAHLVHSK 132
Query: 144 HKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNW 203
H E++LH+ LG LECY CG RN+F LGF+ AK +SVVVLLCR PCA +D+NW
Sbjct: 133 HSEISLHEQSALGGDPLECYNCGSRNVFALGFVAAKQESVVVLLCRMPCA---QARDINW 189
Query: 204 DQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWK-DNAEATFQDLEKP 262
+W+PL+ R+ L W+ +++ R V AQ+A+LE W+
Sbjct: 190 ATNEWQPLVEARALLPWVAA-----QREPARDVKPAQMARLEAQWRVKRDATLADVDADA 244
Query: 263 GVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIA 322
D LLRY D +YQ+++ PLV+ EA DK +KES+ ++++V W + + A
Sbjct: 245 DGARDLAMALLRYPDALEYQHVWAPLVEAEAACDKFMKESRVLDHLSVTWGTVASGRHTA 304
Query: 323 YF 324
F
Sbjct: 305 SF 306
>gi|328852290|gb|EGG01437.1| hypothetical protein MELLADRAFT_79029 [Melampsora larici-populina
98AG31]
Length = 594
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 317/542 (58%), Positives = 379/542 (69%), Gaps = 64/542 (11%)
Query: 93 FNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRG----HTSGSHIINHLVRAKHKEVT 148
++ELPPHAC YCGIH P+ V+ C IC KWFCN RG H++GSHI+NHLVR+KHKEVT
Sbjct: 108 MSRELPPHACAYCGIHSPSSVVRCLICSKWFCNSRGGPGTHSTGSHIVNHLVRSKHKEVT 167
Query: 149 LHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLK-DMNWDQEQ 207
LH DGPLGET ECY CG +N+F LGFIPAK+D+VVVLLCR PCA+ S K D+ WD Q
Sbjct: 168 LHADGPLGETTPECYNCGSKNVFTLGFIPAKSDTVVVLLCRQPCASTPSSKSDLVWDTSQ 227
Query: 208 WKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG--VD 265
W PLI DR FLSWLVKVP EQE R R V +I LEE+WK+NA AT DLE+ G +
Sbjct: 228 WSPLIEDRQFLSWLVKVPDEQEVVRSRPVGFKEITLLEEMWKENAGATLDDLERDGGQGE 287
Query: 266 EDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFS 325
+P +LLRYED YQYQNIFGPLVK+E+DYD++LKES TQ +VTVRWD+GLN+K IAYF
Sbjct: 288 GEPQPILLRYEDAYQYQNIFGPLVKIESDYDRKLKESLTQNDVTVRWDMGLNQKRIAYFY 347
Query: 326 LAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 385
L K E+ VR VG
Sbjct: 348 LPKL-------------------------------ESGEVRLAVG--------------- 361
Query: 386 GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSV 445
DEL+LRY+ + + W GLGHVIK+P++ DEV LEL+ + G P E T FSV
Sbjct: 362 --------DELRLRYAGELQRPWEGLGHVIKVPNSQSDEVALELRRNDGVPHELTVNFSV 413
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN--VDEVLFRCHLPKHFSAPNLP 503
DF+WKSTSFDRMQLA++ FAVD+QSVS YIYH+L+GH+ + +VL R +PK SAPNLP
Sbjct: 414 DFVWKSTSFDRMQLAMKTFAVDEQSVSGYIYHKLMGHDAQIPQVL-RTQMPKRVSAPNLP 472
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LN SQV AVK +Q+PLSLIQGPPGTGKTVTSA+IVY L K VLVCAPSN+AVDQ
Sbjct: 473 ELNHSQVNAVKSVLQKPLSLIQGPPGTGKTVTSASIVYHLSKMNPGQVLVCAPSNVAVDQ 532
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L+EKIH TGLKVVRV AKSREA+DS V +L LH Q+ N + + +L+KL+QLK E GELSS
Sbjct: 533 LSEKIHMTGLKVVRVQAKSREALDSSVQYLTLHLQVANNDTHPDLQKLIQLKSEQGELSS 592
Query: 624 AD 625
D
Sbjct: 593 TD 594
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 353/866 (40%), Positives = 494/866 (57%), Gaps = 75/866 (8%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
+C YC +P+ + C+ C KWFCNG TSGSHI+ HLV+++H + LH + LG++ L
Sbjct: 52 SCSYCDEENPSCLATCSTCSKWFCNGSHGTSGSHIVLHLVKSRHMSIKLHPENALGDSTL 111
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
ECY C NIF LGF+P+K +SVVVL+CR PC +L+D+NWD W PLI +R L W
Sbjct: 112 ECYVCRSTNIFSLGFMPSKEESVVVLVCREPCLHSKTLRDLNWDSSTWLPLIEERRLLPW 171
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
+ VP + +T I LE W D+EK + L+++DG +
Sbjct: 172 ICGVPKVPR----KILTLHDITTLELSWGQKQGQLVYDMEKA------PNIPLQFKDGDE 221
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIF 340
Y +IF LV ++++ K ++ E+V ++ +K I G +Y +
Sbjct: 222 YMSIFSTLVAMDSEAAKE-RKDTVIEDVQCKF-----QKRI-----------GRKYFFVL 264
Query: 341 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRY 400
PL E VG+N+ A + G R + +
Sbjct: 265 KPLPLSE---------------------VGINRGDCAAIGV---KGSKRTLSCVLTETGT 300
Query: 401 SYDASKTWSGLGHVIKIPDNFG--DEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
S ++ + HV + DE+ L SS+ F+++F S R
Sbjct: 301 SQTDEESGVFVAHVTSSAQDKKTLDEI---LASSS-------VNFALEF--NDVSDKRKV 348
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR-CHLPKHFSAPNLPDLNRSQVYAVKHAI 517
AL F+ S+SAY+Y +LGH VD+ R A L +LN SQ AV+ A+
Sbjct: 349 EALSTFSRRSTSLSAYLYFTILGH-VDKAEERYSETDIELPAKRLSNLNNSQEQAVRTAL 407
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
++PL+LIQGPPGTGKT TS IV QL ++ + +LVCAPSN+AVD L E++ GL VVR
Sbjct: 408 KKPLTLIQGPPGTGKTSTSVAIVSQLYERVKTQILVCAPSNVAVDHLAERLEAAGLNVVR 467
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSE----LKKLLQLKEETGELSSADEKRYRMLK 633
+ + R+ I V L L NQ+ + S LK++L L +S D Y+
Sbjct: 468 LQPRCRDVISVAVERLGLDNQVEDFIETSTGHETLKRILGLIRSGENISDEDYNAYKKGT 527
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
E+ +L+ ADV+CCTC+GAGD RL +++F +LIDE+ Q TEPE ++P++ GAKQ+ L
Sbjct: 528 MKIEELILNKADVVCCTCIGAGDSRLREMRFKYVLIDEATQGTEPETLIPLVRGAKQVFL 587
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
VGDHCQL PVV A R G +SLFERL+++G RP RL+VQYRMHP LS F S+ FYEG
Sbjct: 588 VGDHCQLRPVVFSIAAERTGFRRSLFERLLMMGHRPLRLDVQYRMHPCLSLFISHHFYEG 647
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
+LQNGV +R ++ FPWP +P FY + G EE+ +G+SY+NRTEA+ E++ T+
Sbjct: 648 TLQNGVTEGQRDALQV-FPWPDGTRPFFFYNSTGPEELGANGSSYLNRTEAALAEQVVTK 706
Query: 814 FIR-CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
IR G+ P+ IGVITPY Q FL ++ G LPA Y +EV+SVDAFQGREK+ II
Sbjct: 707 LIRDGGVSPDGIGVITPYRSQCRFLRNYLSRCGFLPASTYDRVEVSSVDAFQGREKEFII 766
Query: 873 MSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
SCVRSN QGIGF D RRLNV+LTRAK G+I++GN ++ S+ P WN LL K ++
Sbjct: 767 FSCVRSNHRQGIGFAVDGRRLNVSLTRAKRGLIIMGNVQLFSRYPNWNELLVHMKSLSLI 826
Query: 933 VEGPLNNLKESLILFSKPKQYFKKNN 958
VEGP++ L S ++ KP+Q + NN
Sbjct: 827 VEGPIDALVPSNVVLHKPRQ--RTNN 850
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 613 bits (1582), Expect = e-172, Method: Compositional matrix adjust.
Identities = 345/861 (40%), Positives = 487/861 (56%), Gaps = 76/861 (8%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
+C YC P + CN C KWFCNG TSGSHII HLV++ H + LH + LG++ L
Sbjct: 29 SCSYCSEESPTCLAFCNGCSKWFCNGSNGTSGSHIILHLVKSGHNSLKLHAENSLGDSTL 88
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
ECY C NIF LGF+P+K ++VVVL+CR PC +L+D+NWD W PLI +R L W
Sbjct: 89 ECYICRSSNIFSLGFMPSKEEAVVVLVCREPCLHSKTLRDLNWDSSTWLPLIEERRLLPW 148
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
+ +P+ R +T I LE W+ + +E V E P L +E G +
Sbjct: 149 ICSIPSTLR----RPLTLHDIKALEMSWEQKVKEFVDPVES--VPEVP----LYFESGTK 198
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIF 340
Y +F L+ L++ + K++ + I K G + F
Sbjct: 199 YVEVFSSLIALDSQGARDSKDTSFE--------------GIQCTQQKKIGGRHFFVLKPF 244
Query: 341 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRY 400
PL +DVG+N+ D ++G E L
Sbjct: 245 -PL-----------------------FDVGVNRG----------DNVSIRVKGSESSLSG 270
Query: 401 SY-DASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQL 459
+ + S T H + + D V K + ATT ++ + + R
Sbjct: 271 TITEVSATSVDNEHAVFVTDTTARSVD---KKAVNEILAATT-VTISPEYNGVADKRKME 326
Query: 460 ALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP----DLNRSQVYAVKH 515
AL++FA + SVSAY+Y +LG H F P +LN SQ A++
Sbjct: 327 ALQQFARSEGSVSAYLYFTILGQKERAA----HRNSGFDTEPEPRGHHNLNYSQEQALRV 382
Query: 516 AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKV 575
A++ PL+LIQGPPGTGKT TS I+ +L S +LVCAPSN+AVD L +++ TGLKV
Sbjct: 383 ALRNPLTLIQGPPGTGKTSTSVAIIRELHSHVKSRILVCAPSNVAVDHLAQRVSGTGLKV 442
Query: 576 VRVCAKSREAIDSPVSFLALHNQIRN-MEMNSELKKLLQLKEETGELSSADEKRYRMLKK 634
VR+ AK R I V + L Q+ + + +S L++L +L + S ++K Y K
Sbjct: 443 VRLQAKYRNDIPCSVESIGLERQVGDYINASSGLERLKELLDSMQTGKSLNDKDYGTYKD 502
Query: 635 NAEKS---LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
EK +L NADV+CCTC+GAGD RL +KF +LIDE+ Q TEPE ++P++ GAKQ+
Sbjct: 503 GVEKIERLILRNADVVCCTCIGAGDYRLKTMKFKHVLIDEATQGTEPEVLIPLVRGAKQV 562
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDHCQL P+V A +AG +SLFERLV++G RP RL+VQYRM+P LS FPS+ +Y
Sbjct: 563 ILVGDHCQLRPLVFSTAAEKAGYQRSLFERLVLMGHRPVRLDVQYRMNPSLSFFPSHHYY 622
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EG+LQNGV A++R S++ FPWP KP+ FY G EE+ +G SY+NR EA+ E+I
Sbjct: 623 EGTLQNGVTAEQRDASEV-FPWPDVTKPIFFYNATGNEELGSNGRSYLNRAEAALTEQIV 681
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T+ I+ G++P IGVITPY Q +L ++ G LP ++Y +E++SVDAFQGREK+ I
Sbjct: 682 TKLIQGGVEPGDIGVITPYRSQCRYLRSYLSRSGRLPMEVYDRVEISSVDAFQGREKEFI 741
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
I+SCVRSN QG GF+ D RRLNV+LTRAK G+I++GN ++ S+ P W+ LL +
Sbjct: 742 ILSCVRSNHRQGAGFVTDGRRLNVSLTRAKRGLIIMGNVQLFSRYPGWHELLVHMNSLSL 801
Query: 932 LVEGPLNNLKESLILFSKPKQ 952
+VEGP+++L S ++ KP++
Sbjct: 802 IVEGPIDDLVPSAVVLQKPRK 822
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 292/477 (61%), Positives = 366/477 (76%), Gaps = 20/477 (4%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
PK+++APNLP LN SQV AV+ A+++PLSLIQGPPGTGKTVTSATI+Y L +Q VLV
Sbjct: 5 PKNWTAPNLPQLNHSQVQAVQKALEQPLSLIQGPPGTGKTVTSATIIYHLARQHQGQVLV 64
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM--NSELKKL 611
APSNIAVDQL EKIH TGLKVVR+ AKSRE + SPV FL+LH QIRNM E KKL
Sbjct: 65 TAPSNIAVDQLAEKIHLTGLKVVRILAKSRECLYSPVEFLSLHTQIRNMRTPQAKEFKKL 124
Query: 612 LQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDE 671
LKEE GEL+S+DEKR+R+L+ E+ LL+NADVIC TC GAGDPRL K++F +L+DE
Sbjct: 125 FDLKEEVGELTSSDEKRFRILRSQVERELLENADVICTTCAGAGDPRLGKLRFKMVLVDE 184
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
+ QA EPE ++P+ GAKQ+ILVGDH QLGPVVMCKKAA+AG QSLFERL+ LG+RP R
Sbjct: 185 ATQACEPEALIPICNGAKQVILVGDHKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIR 244
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEI 791
LEVQYRMHP L++FPS FY+G LQNG+ ++R++S + FPWP + PM FY + GQEEI
Sbjct: 245 LEVQYRMHPSLAEFPSQTFYDGCLQNGITMEDRQVSGVKFPWPREEMPMFFYNSTGQEEI 304
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI 851
+ SGTSY+NR+EA N+EKI T F+R G+K QIGV+TPYEGQRA++ Q +Q Q +L AK+
Sbjct: 305 SASGTSYLNRSEAINIEKIITYFLRAGLKGSQIGVVTPYEGQRAYIQQVLQRQTTLSAKM 364
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPK 911
Y+ IE+ASVDAFQGREKD I++SCVRSN G+GFLNDPRRLNVALTRA+YG+++ GN +
Sbjct: 365 YESIEIASVDAFQGREKDFIVLSCVRSNQRAGLGFLNDPRRLNVALTRARYGLVICGNAQ 424
Query: 912 VLSKQ------------------PLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
VL++ +WN LL+ K+ ++VEGPL+ L++S I P
Sbjct: 425 VLARATTVGHQGRGRMTVIRSMPSVWNGLLSHMKKFDLIVEGPLSALRQSHIQIDDP 481
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 343/861 (39%), Positives = 485/861 (56%), Gaps = 76/861 (8%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
+C YC P + CN C KWFCNG TSGSHII HLV++ H + LH + LG++ L
Sbjct: 29 SCSYCSEESPTCLAFCNGCSKWFCNGSNGTSGSHIILHLVKSGHNSLKLHAENSLGDSTL 88
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
ECY C NIF LGF+P+K ++VVVL+CR PC +L+D+NWD W PLI +R L W
Sbjct: 89 ECYICRSSNIFSLGFMPSKEEAVVVLVCREPCLHSKTLRDLNWDSSTWLPLIEERRLLPW 148
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
+ +P+ R +T I LE W+ + +E V E P L +E G +
Sbjct: 149 ICSIPSTLR----RPLTLHDIKALEMSWEQKVKEFVDPVES--VPEVP----LYFESGTK 198
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIF 340
Y +F L+ L++ + K++ + I K G + F
Sbjct: 199 YVEVFSGLIALDSQGARDSKDTSFE--------------GIQCTQQKKIGGRHFFVLKPF 244
Query: 341 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRY 400
PL +DVG+N+ D ++G E L
Sbjct: 245 -PL-----------------------FDVGVNRG----------DNVSIRVKGSESSLSG 270
Query: 401 SY-DASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQL 459
+ + S T H + + D V + + A T T + + + +Q
Sbjct: 271 TITEVSATSVDNEHAVFVTDTTARSVDKKAVNEILAATTVTISPEYNGVADKRKMEALQ- 329
Query: 460 ALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP----DLNRSQVYAVKH 515
+FA + SVSAY+Y +LG H F P +LN SQ A++
Sbjct: 330 ---QFARSEGSVSAYLYFTILGQKERAA----HRNSGFDTEPEPRGHHNLNYSQEQALRV 382
Query: 516 AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKV 575
A++ PL+LIQGPPGTGKT TS I+ +L S +LVCAPSN+AVD L +++ TGLKV
Sbjct: 383 ALRNPLTLIQGPPGTGKTSTSVAIIRELHSHVKSRILVCAPSNVAVDHLAQRVSGTGLKV 442
Query: 576 VRVCAKSREAIDSPVSFLALHNQIRN-MEMNSELKKLLQLKEETGELSSADEKRYRMLKK 634
VR+ AK R I V + L Q+R+ + +S L++L +L + S ++K Y K
Sbjct: 443 VRLQAKYRNDIPCSVESIGLERQVRDYINASSGLERLKELLDSMQTGKSLNDKDYGTYKD 502
Query: 635 NAEKS---LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
EK +L NADV+CCTC+GAGD RL +KF +LIDE+ Q TEPE ++P++ GAKQ+
Sbjct: 503 GVEKIERLILRNADVVCCTCIGAGDYRLKTMKFKHVLIDEATQGTEPEVLIPLVRGAKQV 562
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDHCQL P+V A +AG +SLFERLV++G RP RL+VQYRM+P LS FPS+ +Y
Sbjct: 563 ILVGDHCQLRPLVFSTAAEKAGYQRSLFERLVLMGHRPVRLDVQYRMNPSLSFFPSHHYY 622
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EG+LQNGV A++R S++ FPWP KP+ FY G EE+ +G SY+NR EA+ E+I
Sbjct: 623 EGTLQNGVTAEQRDASEV-FPWPDVTKPIFFYNATGNEELGSNGRSYLNRAEAALTEQIV 681
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T+ I+ G++P IGVITPY Q +L ++ G LP ++Y +E++SVDAFQGREK+ I
Sbjct: 682 TKLIQGGVEPGDIGVITPYRSQCRYLRSYLSRSGRLPMEVYDRVEISSVDAFQGREKEFI 741
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
I+SCVRSN QG GF+ D RRLNV+LTRAK G+I++GN ++ S+ P W+ LL +
Sbjct: 742 ILSCVRSNHRQGAGFVTDGRRLNVSLTRAKRGLIIMGNVQLFSRYPGWHELLVHMNSLSL 801
Query: 932 LVEGPLNNLKESLILFSKPKQ 952
+VEGP+++L S ++ KP++
Sbjct: 802 IVEGPIDDLVPSAVVLQKPRK 822
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 347/852 (40%), Positives = 486/852 (57%), Gaps = 80/852 (9%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG--P 154
+PP AC YC D V C +CK+WFCN + S SHII HL+ H+ + LH DG P
Sbjct: 64 IPPWACCYCRNDDVTAVAQCAVCKRWFCNSQCK-SRSHIIQHLIYNDHRSIILHPDGLIP 122
Query: 155 LG-ETVLECYTCGVR-NIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLI 212
+ +T L C N+F LG I + + ++CR C ++ LK++ WD + W +I
Sbjct: 123 MTKDTPLSCLNNAQHTNVFSLGIIQS-VNGDYTIICRDNCLDRSRLKEIGWDADSWTHII 181
Query: 213 ADRSFL-SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQV 271
+R F+ S L P E Q V+ +I LE +WK N +AT D + +P ++
Sbjct: 182 QNRHFVDSILSNGPPEG--QFTIPVSQKEIQTLESLWKINPQATIYD-----IISNPKKL 234
Query: 272 LLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG 331
+ +T E V R++
Sbjct: 235 I------------------------------KTIEKVPSRFE------------------ 246
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
+ +Y IF PL++L+ + D+ + +V++ WD G+ + +IA F + D R+
Sbjct: 247 NAEEYSRIFSPLIRLDMEADEVANNLKRITDVSITWDTGIGQSTIATFVHDQLDSRYRMN 306
Query: 392 QGDELKLRYSYDASKT---WSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFI 448
G E+ + Y T + G VI I +N + + +KS PT TGFSV F
Sbjct: 307 VGQEIVIHYETKVGDTVCEGNYAGKVIHIDNN---RIKVLMKSQEEPPTGRQTGFSVTFC 363
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 508
W +T F RM A+ + + + ++ +IY +LG+NV + + K +S PN LN
Sbjct: 364 WNATPFTRMLKAVSSY-FNPERMTDFIYQSILGYNVPDKEYPPVYIKSYSLPNFKQLNGF 422
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
Q+ AVK+A+ + L+LIQGPPGTGKTV SATI+Y +VK VLVCAPSNIAVD LT ++
Sbjct: 423 QLDAVKNALNKHLTLIQGPPGTGKTVVSATIIYHIVKSYKQRVLVCAPSNIAVDNLTLRL 482
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHN-QIRNMEMNSELKKLLQLKEETGELSSADEK 627
HR GL VVR+ A+SRE++ S V + LHN + SEL KL +E G+LS +
Sbjct: 483 HRLGLCVVRLVARSRESVRSEVENVCLHNLAVYVGGPTSELYKLNAKLQENGQLSEKEAA 542
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
Y+ AE ++L +A+V+CCTC A D RL + F ++L+DES QA EPEC++P++ G
Sbjct: 543 LYKSYLTIAEHTILSHAEVVCCTCSAALDARLAGLSFPAVLVDESTQAREPECLIPIVNG 602
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
+LILVGDH QLGPV+ ++A RA SLFERL+ LGI+P+ L +QYRMHP LS FPS
Sbjct: 603 CDRLILVGDHKQLGPVIQDQEAKRAEFDISLFERLLSLGIKPYCLNIQYRMHPALSIFPS 662
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FY G+L+N V + ER + FPWP D PM+F+ QG E+ SG S++NR EA+ V
Sbjct: 663 NMFYNGALKNAVHSSERT-RNLAFPWPRSDMPMMFWCVQGSEDPGSSGRSFLNRMEATCV 721
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ----HMQYQGSLPAKIYQEIEVASVDAF 863
EK+ RFI CG+ ++IGVITPY+ QR L Q HM+ A+ +++E+ASVD F
Sbjct: 722 EKVVERFINCGIPGDRIGVITPYDSQRTLLRQVLSRHME-----KAEEVKKVEIASVDEF 776
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGRE D II SCVRSN +GFLND RRLNVA+TRAKYGI++IGNP L P+W L+
Sbjct: 777 QGRENDYIIFSCVRSNSDGVLGFLNDMRRLNVAITRAKYGIVIIGNPNTLRSHPIWVELM 836
Query: 924 NFYKEQKVLVEG 935
N ++ K LV G
Sbjct: 837 NHFQMNKCLVCG 848
>gi|144583657|gb|ABP01542.1| UPF1, partial [Nicotiana attenuata]
Length = 473
Score = 597 bits (1539), Expect = e-167, Method: Compositional matrix adjust.
Identities = 298/529 (56%), Positives = 366/529 (69%), Gaps = 58/529 (10%)
Query: 171 FVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQ 230
F+LGFI AKA+SVVVLLCR PC N+LKDMNWD QW PLI DR FL WLVKVP+EQEQ
Sbjct: 1 FLLGFISAKAESVVVLLCREPCLNVNALKDMNWDLSQWCPLIDDRCFLQWLVKVPSEQEQ 60
Query: 231 QRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVK 290
R RQ+ + QI K+EE+WK N +AT +DLEKPGVD +P V L+YED QYQNIF PL+K
Sbjct: 61 LRARQINAQQINKVEELWKTNPDATLEDLEKPGVDGEPQPVALKYEDACQYQNIFAPLIK 120
Query: 291 LEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADY 350
LEADYDK +KESQ+++N+T+RWD+GLNKK +AYF K D + ++L
Sbjct: 121 LEADYDKMMKESQSKDNLTIRWDIGLNKKRVAYFVFPKEDNE-----------LRLVPGD 169
Query: 351 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSG 410
+ RL+ S GD A W
Sbjct: 170 ELRLRYS----------------------------GDA---------------AHPAWQS 186
Query: 411 LGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQS 470
+GHV+K+ +EV LEL+ S G P + T G SVDF+WKSTSFDRMQ A++ FAVD+ S
Sbjct: 187 VGHVVKL--TAQEEVALELRVSQGVPVDVTHGLSVDFVWKSTSFDRMQSAMKTFAVDETS 244
Query: 471 VSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGT 530
VS YIYH LLGH V+ + R LP+ F AP LP+LN SQV+AVK +Q+P+SLIQGPPGT
Sbjct: 245 VSGYIYHHLLGHEVEMQMVRNALPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGT 304
Query: 531 GKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV 590
GKTVTSA IVY + KQ VLVCAPSN+AVDQL EKI TGLKVVR+CAKSREA+ SPV
Sbjct: 305 GKTVTSAAIVYHVAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPV 364
Query: 591 SFLALHNQIRNMEMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVIC 648
L LH Q+R+++ + SEL KL QLK+E GELSS+DEK+Y+ LK+ E+ + +ADVIC
Sbjct: 365 EHLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREIAQSADVIC 424
Query: 649 CTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
CTCVGAGDPRL +F +LIDES QATEPEC++P++LGAKQ +LVGDH
Sbjct: 425 CTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGAKQAVLVGDH 473
>gi|21410895|gb|AAH30916.1| Upf1 protein, partial [Mus musculus]
Length = 543
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 274/349 (78%), Positives = 311/349 (89%)
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
KL QLK+ETGELSSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILI
Sbjct: 1 KLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILI 60
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
DES QATEPECMVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP
Sbjct: 61 DESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRP 120
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
RL+VQYRMHP LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQE
Sbjct: 121 IRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQE 180
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
EIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL
Sbjct: 181 EIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHT 240
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GN
Sbjct: 241 KLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGN 300
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNN 958
PK LSKQPLWN+LL++YKEQK LVEGPLNNL+ESL+ FSKP++ N
Sbjct: 301 PKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKPRKLVNTVN 349
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 298/563 (52%), Positives = 388/563 (68%), Gaps = 59/563 (10%)
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV--------------- 484
TGF V+F+WKST++DRMQLAL +FA + S+S ++YH+LLGH++
Sbjct: 9 NTGFVVEFVWKSTAYDRMQLALNEFAFNSFSLSGHLYHKLLGHDIIDEPINYNKKEFSLN 68
Query: 485 ------------DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGK 532
++ + ++SAPNL LN SQ+ A++ ++ PLSLIQGPPGTGK
Sbjct: 69 SDSKKYGYNKKSNDNFSTSYKIVNYSAPNLAPLNHSQIDAIQKSLNSPLSLIQGPPGTGK 128
Query: 533 TVTSATIVYQLVK-QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
T+T AT+VY + K + G VLV APSN+AVDQL+ +IHRTGLKVVR+CA+SRE++ S
Sbjct: 129 TLTCATLVYHMHKTKMGGKVLVTAPSNVAVDQLSVRIHRTGLKVVRLCARSRESVSSIAD 188
Query: 592 FLALHNQIR--NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICC 649
+L LHNQ++ ++ EL KLL+LKEE GELS DE R + L +AE +L ADVIC
Sbjct: 189 YLYLHNQVKLLKTDVGEELNKLLELKEEVGELSQKDENRLKKLILHAEYKILIEADVICT 248
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
TCVGA D RL K +F+ +L+DE+ Q+TEPEC+VP++ AKQ++LVGDHCQLGP+++CKKA
Sbjct: 249 TCVGAMDKRLKKFRFNQVLVDEATQSTEPECLVPLV-TAKQIVLVGDHCQLGPIIVCKKA 307
Query: 710 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
A AGL +SLFERLV+LGI PFRLEVQYRMHP LS+FPS FY+G LQNG+ ER+
Sbjct: 308 ASAGLGKSLFERLVMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKEREYPLK 367
Query: 770 DFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
+FPWP PM FY + G EE++ SGTSY+NR+EA N+E + + G+K QIGVITP
Sbjct: 368 NFPWPNSKYPMFFYNSNGLEEMSASGTSYLNRSEAQNMEILVRALLNSGLKATQIGVITP 427
Query: 830 YEGQRAFLV----QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
YEGQRA++ +++ YQ L +IEVASVDAFQGREKD I++SCVRSN GIG
Sbjct: 428 YEGQRAYITSLFQKNISYQHCL------DIEVASVDAFQGREKDFILLSCVRSNKKLGIG 481
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ------------------PLWNNLLNFYK 927
FLNDPRRLNVALTRAKYG+I+ GN KVLS+ +W NLLN +K
Sbjct: 482 FLNDPRRLNVALTRAKYGLIICGNAKVLSRHHFISKEKLNSNETITNVNSVWINLLNQFK 541
Query: 928 EQKVLVEGPLNNLKESLILFSKP 950
++ ++VEG L+NLK I P
Sbjct: 542 KKNLIVEGCLSNLKSITINIPAP 564
>gi|440295047|gb|ELP87976.1| nonsense-mediated mRNA decay protein, putative [Entamoeba invadens
IP1]
Length = 943
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 338/888 (38%), Positives = 488/888 (54%), Gaps = 74/888 (8%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C YCG+ D ++ C C ++FCNG G SHI++H+ R+ HKE+ KD E +E
Sbjct: 9 CYYCGLRDGKKLLRCG-CGRYFCNGVGEGHISHIVHHIARSTHKELRFPKDSKFRECTIE 67
Query: 162 CYTCGVRNIFVLGFIPAKAD-SVVVLLCRTPCAAQNSLKDM--NWDQEQWKPLIADRSFL 218
C+ C RN FVLG+I + + ++CR C +L M NWD + WKPL+ D+ F
Sbjct: 68 CFLCRCRNPFVLGYIVLRNNPGTKTVICRE-CRYVETLTTMTDNWDVDSWKPLVQDKKFE 126
Query: 219 SWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
W+ P++ E + V+ ++ K E W+ + + D + ED HQ L Y D
Sbjct: 127 EWICPSPSDAEMKFVVGVSGNEMRKKEFEWQTSKKKIRNDYYQ----EDLHQTYLNYHDC 182
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQN 338
QYQN F PL+KLEA+ DK +ES+ N+ +++D + K D + +
Sbjct: 183 VQYQNTFTPLIKLEANADKNKRESEHLVNIDLKFD-----------DVRKAD----EMKK 227
Query: 339 IFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKL 398
++ A+ + R+ N T+ + + L KS+ + + M DE K
Sbjct: 228 TVHATFEVPANEEIRI-----TINDTLMFFLPLKGKSVEVNEIHTYNE----MVPDE-KD 277
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEA--------TTGFSVDFIWK 450
++ G I+ G ++ ++ + + G P E FS+ F W
Sbjct: 278 KFFSRLHTLLVGTVQYIR-----GKDITVQFEKTPGVPIEKQIITQQHNAMKFSICFQWM 332
Query: 451 STSFDRMQLALRKFAVDDQ-----SVSAYIYHRLLG--HNVDEVLF--------RCHLPK 495
S F R + AL+ F ++ ++S+Y+ +RLLG N ++++ +L +
Sbjct: 333 SIPFKRKKTALQMFGESEEPHDFPTMSSYLRNRLLGMPKNPMDMVYEKDFKDEKEAYLAQ 392
Query: 496 H-----FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT-GS 549
H +APNLP LN+ Q V + + LSLIQGPPGTGKTVTSATI+Y V G
Sbjct: 393 HPTLQSMNAPNLPTLNQVQYEVVMKSFTQSLSLIQGPPGTGKTVTSATIIYHAVHSNPGK 452
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLAL----HNQIRNMEMN 605
VLVCAPSNIAVDQL KI TG+KV+RV K RE+ + P+ +L + + M+
Sbjct: 453 KVLVCAPSNIAVDQLAAKIVDTGVKVIRVFGKGRESENEPLYDYSLGKIVDDVMAQMKDK 512
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI--K 663
L+K +EE EL+ AD+ + ++ E + DVICCTC AGD RL I +
Sbjct: 513 ETLEKYKAFREEPEELAEADKNSILAVIRDIELKVFRECDVICCTCCVAGDRRLFGINNQ 572
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
++L+DES QA EPE +V + +Q+ LVGDHCQLGPV+ K A + GL +F RL+
Sbjct: 573 IDTVLVDESTQAEEPEVLVCFMNSVRQIFLVGDHCQLGPVLNSKDARKYGLGLPMFSRLL 632
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY 783
LG P+RL+ QYRMHP LS+F S+ FY+G LQNGV A ER+ + + W V ++PM+F
Sbjct: 633 QLGHEPYRLQFQYRMHPALSEFSSHTFYDGVLQNGVTALERQFNSLKRFWFVQNRPMMFV 692
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQY 843
T G+E + TSY+N E + + I + I CG+ PEQIGVITPY Q+ + +
Sbjct: 693 ATAGKESFGSTATSYLNDEEVTVIRDIIVKMIDCGVSPEQIGVITPYIAQKQAIRVRLTK 752
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
L + IE+ASVD+FQGREKD II S VRSN IGFL +P+RLNV++TRAKYG
Sbjct: 753 DTELGVNVMNAIEIASVDSFQGREKDFIIFSTVRSNSTNEIGFLKNPQRLNVSITRAKYG 812
Query: 904 IIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
++V+GNP LS PLW+ L F+ + VLV G +NNLK ++ K K
Sbjct: 813 LVVVGNPSTLSSDPLWSLYLQFFIDHNVLVHGNINNLKPFPLVLEKKK 860
>gi|443913950|gb|ELU36263.1| ATP dependent helicase [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/489 (55%), Positives = 341/489 (69%), Gaps = 57/489 (11%)
Query: 191 PCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKD 250
PCAA + KD++W+ W PLI DRSFLSWLV P+EQEQ R RQ+T AQI +LE++W+D
Sbjct: 74 PCAAIS--KDISWNTALWAPLIEDRSFLSWLVTPPSEQEQLRARQITYAQINRLEDLWRD 131
Query: 251 NAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTV 310
NA AT +DLEKPGVD++P +L RYED YQYQNIFGPLVK+EADYDKRLKESQTQ++V V
Sbjct: 132 NANATLEDLEKPGVDDEPQPILQRYEDAYQYQNIFGPLVKIEADYDKRLKESQTQDDVVV 191
Query: 311 RWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVG 370
RWD GLN+K IA+F+ K E+ VR VG
Sbjct: 192 RWDQGLNQKRIAWFNFPKL-------------------------------ESGEVRLAVG 220
Query: 371 LNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK 430
DEL+LRY D+ W G GHV+KIP+N DE+GLEL+
Sbjct: 221 -----------------------DELRLRYHGDSHHAWEGSGHVLKIPNNISDEIGLELR 257
Query: 431 SSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHR-LLGHNVDEVLF 489
+ G P + T GFSVDF+WKSTSFDRMQLA++ FA+D++SVS YI + H+++ +
Sbjct: 258 RNDGVPVDCTHGFSVDFVWKSTSFDRMQLAMKTFAIDEKSVSGYIVSKPSYCHDLEPTIL 317
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
R +PK FSAP LP+LN SQ+YAVK +Q+P+SLIQGPPGTGKTVTSA+IVY L K
Sbjct: 318 RTQMPKRFSAPGLPELNHSQMYAVKSVLQKPISLIQGPPGTGKTVTSASIVYHLAKMNPG 377
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELK 609
VLVCAPSN+AVDQLTEKIH TGLKVVR+ AKSREA++S ++FL LH Q+ ++EL+
Sbjct: 378 QVLVCAPSNVAVDQLTEKIHATGLKVVRLTAKSREALESSIAFLTLHRQVAAYTSHTELQ 437
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
KL+QLK E GELS +DE++Y+ L +N E+ +L ADVICCTCVG GDPRL K+KF ++LI
Sbjct: 438 KLIQLKNELGELSQSDERKYKTLVRNVEREILAAADVICCTCVGTGDPRLSKLKFRTVLI 497
Query: 670 DESMQATEP 678
DE+ QA EP
Sbjct: 498 DEATQAAEP 506
>gi|123508693|ref|XP_001329696.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121912743|gb|EAY17561.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 882
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 323/868 (37%), Positives = 462/868 (53%), Gaps = 94/868 (10%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
C YC P ++ +WFCNGRG SHII+HLV+++H E+ L P + +
Sbjct: 47 CCSYCLCDIPECLVKDKAIGRWFCNGRGKALHSHIIHHLVKSRHMEIELPPQNPYSQIPM 106
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
CY C NIF L F+ ++ +LCR C L + D + ++ L W
Sbjct: 107 TCYLCHSTNIFRLSFVQSQKTGKYFVLCRE-CCNDPQLHLYSLDLAHRQLIVQQTQMLEW 165
Query: 221 LVKVPTEQEQQRGRQ---VTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYED 277
LV+ P+ E + G + +T + LEE W ++P+ +L
Sbjct: 166 LVRPPSHAESKDGFRFCDITPTDMDLLEETWP----------------KNPNATIL---- 205
Query: 278 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQ 337
D+ +KS T D Y
Sbjct: 206 -----------------------------------DLPQIRKSTTIPKTKPTYKDIRDYA 230
Query: 338 NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELK 397
+ LVKLE DYDK++ ES NV + + + FS ++ + GD
Sbjct: 231 TTYNTLVKLEMDYDKQVTESMIYRNVKINFKREGYNRFTGTFSFPISETSRPINIGDTFL 290
Query: 398 LRY-SYDASKTWS---GLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
++ +Y+A + G+G E+ L P +A F+V +W TS
Sbjct: 291 VKCGAYEAKGSLERTLGVG-----------EIELLFIRQPTPPEDAI--FTVQLVWLDTS 337
Query: 454 FDRMQLALRKFAVDDQSVSAYIYHR-LLGHNVDEVLFRCHLPKHFSAPN-------LPDL 505
F RM A+ K Q+ +A I ++GH D + P PN +P L
Sbjct: 338 FVRMIGAIAKMPQSPQTSTANIIKEVIMGHLPDTI------PTLPGEPNRSPVVKGIPTL 391
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLT 565
N SQV AV +A++ P +IQGPPGTGKT T A +V + ++ PVLVCAPSN AV+++T
Sbjct: 392 NLSQVNAVSYALKSPFCMIQGPPGTGKTTTIAALVTRFLQAKAGPVLVCAPSNAAVERVT 451
Query: 566 EKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL--LQLKEETGELSS 623
E I T V RV + SR I++ ALHN + +++ +E ++L + ++ + S
Sbjct: 452 EAIASTHASVCRVISTSRTDIEAIDDKYALHNMVYSLDC-AESRRLNDMLIERSNRDFSE 510
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
+EK+++ L+K+ E ++D ADVI CTC+ + DPRL F +++IDE+ QA EPE ++P
Sbjct: 511 DEEKKFKDLRKSLENRVIDAADVITCTCITSADPRLATKVFPTVIIDEATQAVEPEILIP 570
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
++ G+KQ+ LVGDH QLGPVV K AGL S+ +RLV LG+RP RL QYRMHP LS
Sbjct: 571 IMHGSKQVCLVGDHMQLGPVVTNPKCVEAGLGNSIVQRLVQLGLRPQRLLTQYRMHPVLS 630
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV-TQGQEEIAGSGTSYVNRT 802
+FPSN FY+G L NG+ A++R + F WP P P++FY +EEI+ SGTSY+N
Sbjct: 631 EFPSNTFYDGELMNGIPAEKRTPQQPVFNWPKPSFPLMFYNNVNNEEEISNSGTSYINAF 690
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+ V +I T+ + G+ P+QIG+I+PY GQ+ +L + +LP+ YQ + +ASVD+
Sbjct: 691 EATIVSQIVTQLCKAGVDPQQIGIISPYSGQKFYLQNFLASMATLPSSFYQRLAIASVDS 750
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQG EKD IIMSCVR N H IGFL D RRLNVALTRAKYG+I++G +VLSK LW NL
Sbjct: 751 FQGGEKDYIIMSCVRCNPHGSIGFLKDYRRLNVALTRAKYGLIIVGCARVLSKSILWYNL 810
Query: 923 LNFYKEQKVLVEGPLNNLKESLILFSKP 950
L +EQ VLVEG + +LKES + KP
Sbjct: 811 LRHCQEQHVLVEGSIMDLKESPCVLQKP 838
>gi|226481521|emb|CAX73658.1| Regulator of nonsense transcripts 1 [Schistosoma japonicum]
Length = 731
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 245/357 (68%), Positives = 302/357 (84%), Gaps = 1/357 (0%)
Query: 595 LHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LH Q +N++ ++EL+KL QLK+ETGELS D+KRYR+LK+ E+ LL ADV+CCTCV A
Sbjct: 2 LHIQAQNVKGHTELRKLQQLKDETGELSQDDDKRYRVLKRELERELLMAADVVCCTCVTA 61
Query: 655 GDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
GD RL ++ FHS+LIDES QATEPEC++P+++G +Q++LVGDHCQLGPV+ CKKAA AGL
Sbjct: 62 GDARLERLSFHSVLIDESTQATEPECLIPLMVGCRQVVLVGDHCQLGPVITCKKAASAGL 121
Query: 715 SQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
+QSLFER V+LGIRP RL+VQYRMHP LS FPSN FYEGSLQNGV A++R K DFPWP
Sbjct: 122 TQSLFERFVLLGIRPIRLQVQYRMHPALSAFPSNVFYEGSLQNGVTAEDR-CKKTDFPWP 180
Query: 775 VPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQR 834
PD+PM FY T GQEEI+G+G SY+NRTEA+ VEKI T+ ++ G+ P IGVITPYEGQR
Sbjct: 181 NPDRPMFFYCTSGQEEISGNGVSYLNRTEAATVEKIVTKMLKIGVHPNTIGVITPYEGQR 240
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
A+L ++ Y GSL AK+YQEIE+ASVDAFQGREKD II+SCVR+N++QGIGFLNDPRRLN
Sbjct: 241 AYLAHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIILSCVRANENQGIGFLNDPRRLN 300
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
VALTRA+YG+IV+GNPK L KQPLWN LL+FY++Q +LVEGPLNNL E ++ F +PK
Sbjct: 301 VALTRARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLLVEGPLNNLSEYMLQFPRPK 357
>gi|76155569|gb|AAX26862.2| SJCHGC04134 protein [Schistosoma japonicum]
Length = 441
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/498 (53%), Positives = 343/498 (68%), Gaps = 59/498 (11%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHIINHLVRA+ KEVTLHKDGPL +T+
Sbjct: 1 HACAYCGIHDPACVVFCNTTKKWFCNGRGNTSGSHIINHLVRARAKEVTLHKDGPLKDTL 60
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+PAK++SVVVLLCR CA N+ KDM WD QW+P+I R FL+
Sbjct: 61 LECYVCGSKNVFLLGFVPAKSESVVVLLCRNVCA--NANKDMYWDPAQWQPIIQGRQFLT 118
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
WLVKVPT+++Q + RQ+++ QI +LEE+WK+N +A +DLEKPG D + + VLLRYE
Sbjct: 119 WLVKVPTDEQQAKARQISAQQINRLEEMWKENPQAAVEDLEKPGADNEVNPVLLRYEHSQ 178
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNI 339
QY+++F PLV+LEADYDK++KES ENV+VRW+ LNK+ +AYF + +
Sbjct: 179 QYRDVFTPLVELEADYDKKIKESLKLENVSVRWETALNKRRVAYFRIPGANE-------- 230
Query: 340 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLR 399
GP ++R+M GDEL +R
Sbjct: 231 -GP--------------------------------------------ELRIMHGDELIIR 245
Query: 400 YSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQL 459
+ G+GHV+K+PDNF DEVGLE+K P E T + ++F WKST FDRM+
Sbjct: 246 QFNSPNDCLIGVGHVVKVPDNFSDEVGLEMKQVIDTPLEPVT-YKIEFKWKSTPFDRMRR 304
Query: 460 ALRKFAVDDQS--VSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
A+ D+Q + YI++RLLG +D+++ +C+LPK +SAP+LP+LN SQV+AVK +
Sbjct: 305 AI-SVVTDEQHGLLPPYIFYRLLGQELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVL 363
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRPLSLIQGPPGTGKTVTSA+IVY L + VLV APSN AVDQL EKI RTGLKVVR
Sbjct: 364 QRPLSLIQGPPGTGKTVTSASIVYHLNQIHQKKVLVVAPSNTAVDQLCEKIDRTGLKVVR 423
Query: 578 VCAKSREAIDSPVSFLAL 595
+CA+SREA+ SPVS L L
Sbjct: 424 LCARSREALASPVSRLML 441
>gi|407039213|gb|EKE39508.1| regulator of nonsense transcripts, putative [Entamoeba nuttalli
P19]
Length = 937
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 327/881 (37%), Positives = 468/881 (53%), Gaps = 87/881 (9%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C YCG+ D +I C C K+FCNG G+ SHII+H KHK D + ++
Sbjct: 11 CWYCGLADKKKLIRCG-CGKYFCNGTGNGKVSHIIHHASSLKHK------DLKYSDEYIQ 63
Query: 162 CYTCGVRNIFVLGFIPAKADS-VVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
C C RN FVLGFI K +S + LCRT C ++K++ WD + W ++ + F++
Sbjct: 64 CNLCKTRNPFVLGFIQVKQNSDMTTCLCRT-CRYNTTIKNLGWDVDSWTSIVCEGKFVNE 122
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
+ P+ +E + ++ ++ K+ ++N + ++ E E+ H + L Y D Q
Sbjct: 123 ICPQPSNEEMNIVQSISYQKMRKMAWELQNNRKKFEEETET---FEELHPIYLNYHDCKQ 179
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIF 340
Y + + PL++LEA+ D++ +ES+ N+T+ +D +K I
Sbjct: 180 YYHTYYPLIRLEAEADRQKRESEHLTNMTLTFDGTRTEKDI------------------- 220
Query: 341 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRY 400
K++ + Q + + LN Y + D+ + +
Sbjct: 221 -----------KKVVHATFQVPLNEEISITLNDVLFFYVPMKNKSIDVHEIHNYG---EF 266
Query: 401 SYDASKTWSG------LGHVIKIPDNFGDEVGLELKSSAGAPTEATT--------GFSVD 446
+ K + G +G+V I G V + L A P E +S+
Sbjct: 267 NEHEKKEFIGKINTFLVGNVQSID---GKNVTVLLSRQADIPIEKQIVTPQNQQFKYSIC 323
Query: 447 FIWKSTSFDRMQLALRKFAVDDQ-----SVSAYIYHRLLGHNVDEV------LFR----C 491
F W S F R ++AL F + S+S Y+ RLLG + E+ F+
Sbjct: 324 FQWLSIPFRRKKVALLDFCRTENEPIEASMSKYLRDRLLGMPITEMDRQMEQQFKEEKEM 383
Query: 492 HLPKH-----FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
+L H SAPNLP LN+ Q VK + + LSLIQGPPGTGKTVTSATIVY +V+
Sbjct: 384 YLNSHPTEASLSAPNLPPLNQVQFDVVKKSFTKQLSLIQGPPGTGKTVTSATIVYHVVQS 443
Query: 547 T-GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI-RNMEM 604
G VLVCAPSNIAVDQL KI TG+KV+RV +KSRE D + +L + ++
Sbjct: 444 NPGKKVLVCAPSNIAVDQLGTKITETGVKVIRVYSKSREIEDESLYDYSLKTLMEEQLKK 503
Query: 605 NSELKKLLQ-LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ E+ L Q K++ L + + E SLL DVICCTC GA D RL I
Sbjct: 504 DKEMFALYQEYKDDPDSLDIVSKTTIQKRINEIELSLLRETDVICCTCCGALDSRLSGIL 563
Query: 664 FH--SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
H ++LIDES QA EPEC++ + KQL LVGDHCQLGP++ +A + GL +F R
Sbjct: 564 EHIDTVLIDESTQADEPECLICLNNSVKQLFLVGDHCQLGPILNSPRAKKNGLGLPMFSR 623
Query: 722 LVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
L+ LG P+RL+ QYRMHP LS+F S FY+G LQNGV A ER+ + + W +KPM+
Sbjct: 624 LLQLGHEPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKPMM 683
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
F G+E +GTSY+N E +E+I + + + P QIGVITPY Q+ ++ +
Sbjct: 684 FIAANGKESYGSNGTSYLNDEEVFLIEQIIIKMLGNKVSPSQIGVITPYIAQKQAIISRL 743
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
+ +IE+ASVD+FQGREKD II S VRSN+ IGFL+ P+RLNV++TRAK
Sbjct: 744 SLNRRISEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNVSITRAK 803
Query: 902 YGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKE 942
YG++V+GNP+ L + PLW L F++ VLV G L NLKE
Sbjct: 804 YGLVVVGNPETLMQNPLWCAYLQFFQNNNVLVHGQLENLKE 844
>gi|167384498|ref|XP_001736978.1| nonsense-mediated mRNA decay protein [Entamoeba dispar SAW760]
gi|165900437|gb|EDR26756.1| nonsense-mediated mRNA decay protein, putative [Entamoeba dispar
SAW760]
Length = 937
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 328/875 (37%), Positives = 473/875 (54%), Gaps = 75/875 (8%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C YCG+ D +I C C K+FCNG G SHII+H+ KHK D + ++
Sbjct: 11 CWYCGLADKKKLIRCG-CGKYFCNGTGDGKVSHIIHHVSSLKHK------DLKYSDEYIQ 63
Query: 162 CYTCGVRNIFVLGFIPAKADS-VVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
C C RN FVLGF+ K +S + LCRT C +++++ WD + W ++ + F++
Sbjct: 64 CNLCKTRNPFVLGFLQVKQNSDMTTCLCRT-CRYNTTIQNLGWDVDTWTSIVCEGKFVNE 122
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
+ P+ +E + ++ ++ K+ ++N + E+ E+ H + L Y D Q
Sbjct: 123 VCPQPSNEEMNIVQSISYQKMRKMAWELQNNRKKF---EEETETFEELHPIYLNYHDCKQ 179
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIF 340
Y + + PL++LEA+ D++ +ES+ N+T+ +D +K I K +Q
Sbjct: 180 YYHTYYPLIRLEAEADRQKRESEHLTNMTLTFDGTRTEKDI-----KKIVHVSFQV---- 230
Query: 341 GPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRY 400
PL +E N T+ + V + KSI + G+ ++ K +
Sbjct: 231 -PLN----------EEISITINDTLFFYVPMKNKSIEVNEIHNY-GEF----NEQEKKEF 274
Query: 401 SYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATT--------GFSVDFIWKST 452
+ G IK G +V + L A P E +S+ F W S
Sbjct: 275 LGKINTFLVGSVQSIK-----GKDVTVLLSRQADIPIEKQIVTPQNQQFKYSICFHWLSI 329
Query: 453 SFDRMQLALRKFAVDD-----QSVSAYIYHRLLGHNVDEV------LFR----CHLPKH- 496
F R ++AL F + S+S Y+ RLLG + E+ F+ +L +H
Sbjct: 330 PFRRKRMALLDFCRTEVEPIAASMSKYLRDRLLGMPITEIDRQMEQQFKEEKEMYLSRHP 389
Query: 497 ----FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT-GSPV 551
SAPNLP LN+ Q V+ + + LSLIQGPPGTGKTVTSATIVY +V+ G V
Sbjct: 390 TEASLSAPNLPPLNQVQFDVVRKSFTKQLSLIQGPPGTGKTVTSATIVYHVVQSNPGKKV 449
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHN-QIRNMEMNSELKK 610
LVCAPSNIAVDQL KI TG+KV+RV +KSRE + + +L I ++ + E+
Sbjct: 450 LVCAPSNIAVDQLGIKIIETGVKVIRVYSKSRELAEESLHDYSLKTLMIEQLKKDKEMFL 509
Query: 611 LLQ-LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH--SI 667
L Q K++ L ++ + E +LL DVICCTC GA D RL I H ++
Sbjct: 510 LYQDYKDDPDSLDIVNKTAIQKRINEIELALLRETDVICCTCCGALDNRLNGILEHIDTV 569
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
LIDES QA EPEC++ + KQL LVGDHCQLGP++ +A + GL +F RL+ LG
Sbjct: 570 LIDESTQADEPECLICLNNSVKQLFLVGDHCQLGPILNSSRAKKNGLGLPMFSRLLQLGH 629
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG 787
P+RL+ QYRMHP LS+F S FY+G LQNGV A ER+ + + W +KPM+F G
Sbjct: 630 EPYRLQFQYRMHPCLSEFSSQTFYDGVLQNGVTALERQFPSLKYFWFKQNKPMMFIAANG 689
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
+E +GTSY+N E +E+I + + + P QIGVITPY Q+ ++ + +
Sbjct: 690 KESYGSNGTSYLNDEEVFIIEQIIIKMLVNKVDPSQIGVITPYIAQKQAIISRLSLNRRV 749
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
+IE+ASVD+FQGREKD II S VRSN+ IGFL+ P+RLNV++TRAKYG++V+
Sbjct: 750 SEAQLNDIEIASVDSFQGREKDFIIFSTVRSNEISDIGFLSIPQRLNVSITRAKYGLVVV 809
Query: 908 GNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKE 942
GNP+ L + PLW L F++ VLV G L NLKE
Sbjct: 810 GNPETLMQNPLWCAYLQFFQNNNVLVHGQLENLKE 844
>gi|401827897|ref|XP_003888241.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999441|gb|AFM99260.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 771
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 324/879 (36%), Positives = 466/879 (53%), Gaps = 139/879 (15%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C+YC ++I C C K+FCN R +S SHI+ HLV+A+HK + + D ++
Sbjct: 3 CQYC--EATEFLIECITCGKYFCNSRSASSISHIVFHLVKARHKSIRIEGD-------VK 53
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
C CG N+F L D+ + C C+ + L+ +R +
Sbjct: 54 CRKCGEDNLFKL------LDNNGKIFC-NGCST-------------GRTLVEERCLT--I 91
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
+K P + RGR++T Q+A++EE GV P QV R+E +Y
Sbjct: 92 IKSP----EVRGRRLTKQQMAEMEE---------------KGVSSLP-QVKPRFE-AKEY 130
Query: 282 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFG 341
+F L++ E ++ +KES QENV VRW+ + YF +GD N+ G
Sbjct: 131 VEVFSSLIEAECRKEREIKESMRQENVFVRWE----RMRYCYFYFQ--NGDSELKINV-G 183
Query: 342 PLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYS 401
++L L + E + V + +T GD R
Sbjct: 184 DEIRLTHKSGFVLHGFVSGETFSEELKVEV-----------ETPGDYP---------RSG 223
Query: 402 YDASKTWSGLGH------VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSF- 454
Y W G+ + + K+ + E+ +S EA + K
Sbjct: 224 YTVEYLWRGVCYERMEWALRKLYSTYRKEISKSKRSRCSNDEEADAS---KCLGKRNPMG 280
Query: 455 ---DRMQL----ALRKFAVDDQSVSAYIYHRLLGH-----NVDEVLFRCHLPKHFSAPNL 502
DR ++ A +K A + S+ YI L GH NV+ + F +PNL
Sbjct: 281 CTEDRGEIDGKRAAKKSANEGPSIFEYI---LKGHKESIGNVEHI---------FMSPNL 328
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
P LN SQ AV+ A+ R ++LIQGPPGTGKT+ S+ IVY VK G VLV APSN AVD
Sbjct: 329 PRLNASQETAVRAALGRKVTLIQGPPGTGKTLVSSAIVYNFVKHYGGKVLVVAPSNTAVD 388
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS 622
QLT KIH+TGLKV+RV ++ RE S VSFL+LH ++ E+ KK + + G S
Sbjct: 389 QLTLKIHKTGLKVLRVMSRRRECGQSDVSFLSLHENLK--ELQEGRKKKDEACRDNGRYS 446
Query: 623 SA--DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
S DE ++ K LL+ A+VI CTCV +G K +FH +LIDE++Q+TEP
Sbjct: 447 SIYNDEA-----SESLRKQLLNQAEVITCTCVTSGQKMFNKFRFHYVLIDEAVQSTEPLS 501
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
++P++ G K+L+LVGDH QLGP ++CKK A+AG QSLFERL+ +G+ P+ L VQYRM
Sbjct: 502 LIPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISIGVVPYVLSVQYRMDT 561
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
+L ++PS FY G L G + + D P FYV G+EE++ SGTS++N
Sbjct: 562 DLCEWPSEMFYNGELLTG----GKGFCRFDLGIPTN----FFYVCYGREEVSASGTSFIN 613
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
+ EA E I +CG+ QIGVITPYEGQR++++ + G+ P +E+++V
Sbjct: 614 QAEALYCESIIRHLFKCGVTESQIGVITPYEGQRSYILNRI--FGAEPGN----LEISNV 667
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
D FQGREKD II+S VRSN +QGIGF+ D RR+NV LTRAK+G+++IGNP L K +W+
Sbjct: 668 DGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGNPTTLMKHDIWS 727
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
NLL+FY + +++EGPL+NL+ +I KP + F M
Sbjct: 728 NLLSFYDRKGLVMEGPLHNLRRVII---KPPKLFDFKEM 763
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 839
Score = 491 bits (1263), Expect = e-135, Method: Compositional matrix adjust.
Identities = 278/639 (43%), Positives = 397/639 (62%), Gaps = 20/639 (3%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT--DGDMR 389
D +Y +F L++++++ K K + E+V+ + K +F L K D+
Sbjct: 206 DAVEYATVFSTLIEMDSNAAKEQK-ATIFEDVSCKLQKEFGGK---HFFLLKQFPPFDVG 261
Query: 390 LMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKS-----SAGAPTEATTGFS 444
L GD+ + ++ +S++ +G I +EV E+KS A E +
Sbjct: 262 LRCGDQASI-WAKGSSRSLNGAVVEIGRSQLGEEEVVFEVKSYDLERVRRALNEILAAST 320
Query: 445 VDFI--WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
V+F + STS R AL D S+SAY+Y +LG + + + +
Sbjct: 321 VNFHLEYDSTSDKRKYNALNLMMNDRTSLSAYLYFTILGRAEEAAERFSEVNINLPRERI 380
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN SQ AV+ A++ PL+LIQGPPGTGKT TS IV +L ++T S +LVCAPSN+AVD
Sbjct: 381 SNLNSSQDAAVRTALRNPLTLIQGPPGTGKTSTSVAIVRELHRRTHSQILVCAPSNVAVD 440
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEET 618
QL E+I TGLK VR+ A RE + S V L L +Q I + N LK+LL ++
Sbjct: 441 QLAERISATGLKTVRLQAHYREVVPSSVKHLGLDSQVEEFIASSNGNRTLKQLLDMRLAG 500
Query: 619 GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
L D K Y ++ E+ LL ADVICCTC+GA D RL K++F +LIDE+ Q TEP
Sbjct: 501 KALGEQDIKVYNDGVRDIEEMLLGGADVICCTCIGAADRRLGKMRFQYVLIDEATQGTEP 560
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 738
E +VP++ GAKQ+ L+GDHCQL P+V RAGL +SLFERL++ G R RL+VQYRM
Sbjct: 561 ETLVPLVRGAKQVFLLGDHCQLRPIVFSLPVERAGLRRSLFERLLLTGHRAVRLDVQYRM 620
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSY 798
HP LS FPS+ FYEG+LQNG+ ++R S++ FPWP P +P+ FY T G EE++ +G+SY
Sbjct: 621 HPALSLFPSDQFYEGTLQNGLTEEQRDASQV-FPWPDPTRPIFFYNTTGSEEVSANGSSY 679
Query: 799 VNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
+NR EA+ E+I T+ I+ G +KP+ IGVITPY GQ +L+ ++ G LP Y+ +EV
Sbjct: 680 LNRAEAALTERIITKLIQDGKVKPDDIGVITPYGGQCRYLMNYLLRCGPLPKTAYESVEV 739
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
+SVDAFQGREK+ II+SCVRSN QGIGF+ D RRLNV++TRAK G+I++GN ++LS+ P
Sbjct: 740 SSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITRAKRGLIIMGNVQLLSRYP 799
Query: 918 LWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
+W+ LL E ++V+GP+ L S ++ KP+ ++
Sbjct: 800 VWHALLAHLMELSLVVDGPIEKLVPSKVVLQKPRNVIEE 838
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 133/226 (58%), Gaps = 14/226 (6%)
Query: 80 LQFEEEEDDGNEFFNK--ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIIN 137
++ +E +D N N +L C YCG DP ++MC CKKWFCNG TSGSHI+
Sbjct: 17 IKTNDESNDPNVSENNGPKLAEVGCAYCGEDDPHSLVMCISCKKWFCNGGHGTSGSHIVL 76
Query: 138 HLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNS 197
HLV++KH+ V LH + PLG++ LECY C NIF LGF+P+K +SVVVL+CR PC +
Sbjct: 77 HLVKSKHRAVQLHAENPLGDSALECYICRSTNIFSLGFMPSKEESVVVLVCREPCLHSKA 136
Query: 198 LKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQ 257
L+D+NWD W P+I +R L W+ + P+ +++T I LE +W +
Sbjct: 137 LRDLNWDATTWLPVIEERQLLPWICRAPSAP----CKKITLHDITTLELLWNSEGKQFAD 192
Query: 258 DLEK-PGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES 302
++EK P V LR+ED +Y +F L++++++ K K +
Sbjct: 193 NVEKVPAVP-------LRFEDAVEYATVFSTLIEMDSNAAKEQKAT 231
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 252/518 (48%), Positives = 344/518 (66%), Gaps = 6/518 (1%)
Query: 439 ATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFS 498
A + S + STS R AL D S+SAY+Y +LG + +
Sbjct: 317 AASTVSFRLEYDSTSDQRKCHALNLMMTDWASLSAYLYFTILGRAEEAAKRFSEVDIDLP 376
Query: 499 APNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
L +LN SQ AV+ A++ PL+LIQGPPGTGKT TS IV ++ ++ S +LVCAPSN
Sbjct: 377 RGRLSNLNSSQDTAVRTALRNPLTLIQGPPGTGKTSTSVAIVLEVNRRIRSQILVCAPSN 436
Query: 559 IAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ----IRNMEMNSELKKLLQL 614
+AVDQL E+I GLK VR+ A RE + S V L L +Q I + N L++LL+L
Sbjct: 437 VAVDQLAERISAAGLKTVRLHAHYREVVPSSVKHLGLDSQVEEFIASSSGNRRLRQLLEL 496
Query: 615 KEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
K L ++K Y ++ E++LL ADVICCTC+GA D RL K++F +LIDE+ Q
Sbjct: 497 KLAGEVLDEQEQKIYNDSVRDIEEALLGGADVICCTCIGAADRRLGKMRFQYVLIDEATQ 556
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEV 734
TEPE +VP++ GAKQ+ LVGDHCQL P+V A RAGL +SLFERL++ G R RL+V
Sbjct: 557 GTEPETLVPLVRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLLMTGHRAVRLDV 616
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
QYRMHP LS FPS+ FYEG+LQNG+ ++R S++ FPWP P +P+ FY T G EE++ +
Sbjct: 617 QYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRV-FPWPDPTRPIFFYNTTGSEELSAN 675
Query: 795 GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
G+SY+NR EA+ E+I T+ IR G +KP+ IGVITPY GQ +++ ++ G LP Y+
Sbjct: 676 GSSYLNRAEAALTERIITKLIRDGKVKPDDIGVITPYGGQCRYVMNYLVRCGPLPRTAYE 735
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+EV+SVDAFQGREK+ II+SCVRSN QGIGF+ D RRLNV++TRAK G+I++GN ++L
Sbjct: 736 RVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITRAKRGLIIMGNVQLL 795
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
S+ P W+ LL E ++V+GP+ L S ++ KP+
Sbjct: 796 SRYPAWHALLAHLMELSLVVDGPIEKLVPSKVVLQKPR 833
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 121/201 (60%), Gaps = 10/201 (4%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
C YCG DP ++MC CKKWFCNG TSGSHI+ HLV++KH+ V LH + PLG++ L
Sbjct: 40 GCAYCGEADPHSLVMCISCKKWFCNGGHGTSGSHIVLHLVKSKHRAVQLHAENPLGDSAL 99
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
ECY C NIF LGF+P+K +SVVVL+CR PC +L+D+NWD W P+I +R L W
Sbjct: 100 ECYICRSTNIFSLGFMPSKEESVVVLVCREPCLHSKALRDLNWDATTWLPVIEERQVLPW 159
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
+ +VP+ +++T I LE W + ++EK V LR+E+ +
Sbjct: 160 ICRVPSAP----CKKLTLHDITTLELFWNSEGQQVLDNVEKAP------DVPLRFENAVE 209
Query: 281 YQNIFGPLVKLEADYDKRLKE 301
Y +F L+++++ K KE
Sbjct: 210 YVTVFSTLIEMDSIAAKERKE 230
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 252/518 (48%), Positives = 344/518 (66%), Gaps = 6/518 (1%)
Query: 439 ATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFS 498
A + S + STS R AL D S+SAY+Y +LG + + +
Sbjct: 317 AASTVSFRLEYDSTSDQRKCHALNLMMTDWSSLSAYLYFTILGRAEEAAKRFSEVDINLP 376
Query: 499 APNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
L +LN SQ AV+ A++ PL+LIQGPPGTGKT TS IV ++ + S +LVCAPSN
Sbjct: 377 RGRLSNLNSSQDTAVRTALRNPLTLIQGPPGTGKTSTSVAIVLEVNLRIRSQILVCAPSN 436
Query: 559 IAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ----IRNMEMNSELKKLLQL 614
+AVDQL E+I GLK VR+ A RE + S V L L +Q I + N L++LL+L
Sbjct: 437 VAVDQLAERISAAGLKTVRLHAHYRELVPSSVKHLGLDSQVEEFIASSSGNRRLRQLLEL 496
Query: 615 KEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
K L ++K Y ++ E++LL ADVICCTC+GA D RL K++F +LIDE+ Q
Sbjct: 497 KLAGEVLDEQEQKIYNDSVRDIEEALLGGADVICCTCIGAADRRLGKMRFQYVLIDEATQ 556
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEV 734
TEPE +VP++ GAKQ+ LVGDHCQL P+V A RAGL +SLFERL++ G R RL+V
Sbjct: 557 GTEPETLVPLVRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLLMTGHRAVRLDV 616
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
QYRMHP LS FPS+ FYEG+LQNG+ ++R S++ FPWP P +P+ FY T G EE++ +
Sbjct: 617 QYRMHPALSLFPSDQFYEGTLQNGLTEEQRDASRV-FPWPDPTRPIFFYNTTGSEELSAN 675
Query: 795 GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
G+SY+NR EA+ E+I T+ IR G +KP+ IGVITPY GQ +++ ++ G LP Y+
Sbjct: 676 GSSYLNRAEAALTERIITKLIRDGKVKPDDIGVITPYGGQCRYVMNYLVRCGPLPRTAYE 735
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+EV+SVDAFQGREK+ II+SCVRSN QGIGF+ D RRLNV++TRAK G+I++GN ++L
Sbjct: 736 RVEVSSVDAFQGREKEFIILSCVRSNHRQGIGFVVDWRRLNVSITRAKRGLIIMGNVQLL 795
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
S+ P W+ LL E ++V+GP+ L S ++ KP+
Sbjct: 796 SRYPAWHALLAHLMELSLVVDGPIEKLVPSKVVLQKPR 833
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 122/202 (60%), Gaps = 12/202 (5%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
C YCG DP ++MC CKKWFCNG TSGSHI+ HLV++KH+ V LH + PLG++ L
Sbjct: 40 GCAYCGEADPHSLVMCISCKKWFCNGGHGTSGSHIVLHLVKSKHRAVQLHAENPLGDSAL 99
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
ECY C NIF LGF+P+K +SVVVL+CR PC +L+D+NWD W P+I +R L W
Sbjct: 100 ECYICRSTNIFSLGFMPSKEESVVVLVCREPCLHSKALRDLNWDATTWLPVIEERQVLPW 159
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLRYEDGY 279
+ +VP+ +++T I LE W + ++EK P V LR+E+
Sbjct: 160 ICRVPSAP----CKKLTLHDITTLELFWNSEGQQVLDNVEKAPAVP-------LRFENAV 208
Query: 280 QYQNIFGPLVKLEADYDKRLKE 301
+Y +F L+++++ K KE
Sbjct: 209 EYVTVFSTLIEMDSIAAKERKE 230
>gi|398410035|ref|XP_003856473.1| hypothetical protein MYCGRDRAFT_107419 [Zymoseptoria tritici
IPO323]
gi|339476358|gb|EGP91449.1| hypothetical protein MYCGRDRAFT_107419 [Zymoseptoria tritici
IPO323]
Length = 680
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 233/437 (53%), Positives = 287/437 (65%), Gaps = 63/437 (14%)
Query: 96 ELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPL 155
ELP HAC YCGIH+P V+ C C KWFC+ RG+TS SHIINHLVRA+HKEV LH PL
Sbjct: 92 ELPAHACAYCGIHNPGSVVKCLSCTKWFCSARGNTSSSHIINHLVRARHKEVQLHPSSPL 151
Query: 156 GETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADR 215
G+T LECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DR
Sbjct: 152 GDTTLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSKWQPLIEDR 211
Query: 216 SFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLR 274
SFL WLV PT+QEQ R RQ+ IAKLEE+WKDN AT QDLEK G+D++P VLLR
Sbjct: 212 SFLPWLVNTPTDQEQMRARQLQPQVIAKLEEMWKDNTNATIQDLEKSAGIDDEPAPVLLR 271
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
YD D Y
Sbjct: 272 --------------------YD-----------------------------------DAY 276
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRLMQG 393
QYQN+FGPLVK+EADYD++LKESQ+Q+N+ VRWD GLN K +A F L K + GD++L G
Sbjct: 277 QYQNVFGPLVKIEADYDRKLKESQSQDNLIVRWDFGLNNKHLASFVLPKLELGDVKLAVG 336
Query: 394 DELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWK 450
DE++LRY+ + W G+G+VIKIP+N DEV +EL++ PTE T F+ D++WK
Sbjct: 337 DEMRLRYTGELRPHWEGVGYVIKIPNNQSDEVTIELRARGDHKSVPTECTHNFTADYVWK 396
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+TSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +P+ FS PNLPDLN SQ+
Sbjct: 397 ATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKVQMPRKFSVPNLPDLNGSQI 456
Query: 511 YAVKHAIQRPLSLIQGP 527
AVK L++GP
Sbjct: 457 QAVKSERN---CLVEGP 470
>gi|392512894|emb|CAD25885.2| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
Length = 776
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 274/674 (40%), Positives = 395/674 (58%), Gaps = 93/674 (13%)
Query: 335 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGD 394
+Y +F L++ E ++ +KES QENV VRW+ K YF D ++++ GD
Sbjct: 129 EYVEVFSSLIEAECRKEREIKESMRQENVFVRWE----KMKYCYFYFQNGDSELKINVGD 184
Query: 395 ELKLRYSYDASKTWSGLG-HVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS 453
E++L + SGL H + F +E+ +E+++ P +G++V+++W+
Sbjct: 185 EIRLTHK-------SGLVLHGFVSGETFSEELKVEIETPGDYPR---SGYTVEYLWRGVC 234
Query: 454 FDRMQLALR------KFAVD-------------------------DQSVSAYIYHRLLG- 481
++RM AL+ K VD D+ S Y +G
Sbjct: 235 YERMVWALKKLYSTYKREVDRNKRNRNKDDGKKLEDKGIDEGKDPDKKKSMYGVEGDVGV 294
Query: 482 ---------HNVDE--VLFRCHLPKH----------FSAPNLPDLNRSQVYAVKHAIQRP 520
++DE +F L H FS+PNLP LN SQ AV+ A+ R
Sbjct: 295 DRRKGVRAKKSLDEGPSIFEYILKGHKEGIGNFDHIFSSPNLPKLNASQEVAVRAALGRK 354
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCA 580
++LIQGPPGTGKT+ S+ IVY LV+ G VLV APSN AVDQLT KIH+TGL+V+RV +
Sbjct: 355 VTLIQGPPGTGKTLVSSAIVYNLVRHYGGKVLVVAPSNTAVDQLTLKIHKTGLRVLRVMS 414
Query: 581 KSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSL 640
+ RE S VSFL+LH +R EL++ + K+E + S D + ++ +K L
Sbjct: 415 RRREYGQSDVSFLSLHENLR------ELQEGRKRKDE--DHSRYDSIYNDEVNESLKKQL 466
Query: 641 LDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQL 700
L+ A+VI CTCV +G + KFH +LIDE++Q+TEP ++P++ G K+L+LVGDH QL
Sbjct: 467 LNQAEVITCTCVTSGQKMFNRFKFHCVLIDEAVQSTEPLSLIPLVYGCKKLVLVGDHKQL 526
Query: 701 GPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
GP ++CKK A+AG QSLFERL+ +G+ P+ L VQYRM +L ++PS FY G L G
Sbjct: 527 GPTILCKKVAQAGFKQSLFERLISIGVVPYMLSVQYRMDADLCEWPSEMFYNGELLTG-- 584
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK 820
+ + D PV FYV G+EE++ SGTS+VN+ EA E I +CG+
Sbjct: 585 --GKNFCRFDLGIPVN----FFYVCYGREEVSASGTSFVNQAEALYCESIIRHLFKCGVT 638
Query: 821 PEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND 880
QIGVITPYEGQR++++ + G+ P +E+++VD FQGREKD II+S VRSN
Sbjct: 639 ESQIGVITPYEGQRSYILNRI--FGAEPG----NLEISNVDGFQGREKDFIIVSLVRSNL 692
Query: 881 HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNL 940
+QGIGF+ D RR+NV LTRAK+G+++IGNP L K +W NLL+FY + +++EGPL+NL
Sbjct: 693 YQGIGFVGDKRRMNVTLTRAKHGLVIIGNPMTLMKHDMWGNLLSFYDRKGLVMEGPLHNL 752
Query: 941 KESLILFSKPKQYF 954
K +I KP + F
Sbjct: 753 KRVII---KPPKLF 763
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 144/363 (39%), Gaps = 120/363 (33%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C+YC +I C C K FCN R +S SHI+ HLV+AKHK + ++ D ++
Sbjct: 3 CQYC--EAAELLIECITCGKCFCNSRSASSISHIVFHLVKAKHKSIRINGD-------IK 53
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
C CG N+F L +N K K L+ +R +
Sbjct: 54 CRKCGEDNLFKL--------------------LENGGKIFCNGCSSGKMLVEERCLT--I 91
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
VK P Q GR++T Q+A++EE V PH V R+E +Y
Sbjct: 92 VKSPEVQ----GRRLTKQQMAEMEE---------------RNVSPLPH-VKPRFE-AKEY 130
Query: 282 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFG 341
+F L++ E ++ +KES QENV VRW+ K YF D +
Sbjct: 131 VEVFSSLIEAECRKEREIKESMRQENVFVRWE----KMKYCYFYFQNGDSE--------- 177
Query: 342 PLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYS 401
++ +VG ++RL L L +
Sbjct: 178 -----------------------LKINVG---------------DEIRLTHKSGLVL-HG 198
Query: 402 YDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLAL 461
+ + +T+S +E+ +E+++ P +G++V+++W+ ++RM AL
Sbjct: 199 FVSGETFS-------------EELKVEIETPGDYP---RSGYTVEYLWRGVCYERMVWAL 242
Query: 462 RKF 464
+K
Sbjct: 243 KKL 245
>gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
gi|449329865|gb|AGE96133.1| mRNA decay control [Encephalitozoon cuniculi]
Length = 782
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 275/693 (39%), Positives = 403/693 (58%), Gaps = 93/693 (13%)
Query: 316 LNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKS 375
+ +++++ K + +Y +F L++ E ++ +KES QENV VRW+ K
Sbjct: 116 MEERNVSPLPHVKPRFEAKEYVEVFSSLIEAECRKEREIKESMRQENVFVRWE----KMK 171
Query: 376 IAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLG-HVIKIPDNFGDEVGLELKSSAG 434
YF D ++++ GDE++L + SGL H + F +E+ +E+++
Sbjct: 172 YCYFYFQNGDSELKINVGDEIRLTHK-------SGLVLHGFVSGETFSEELKVEIETPGD 224
Query: 435 APTEATTGFSVDFIWKSTSFDRMQLALR------KFAVD--------------------- 467
P +G++V+++W+ ++RM AL+ K VD
Sbjct: 225 YPR---SGYTVEYLWRGVCYERMVWALKKLYSTYKREVDRNKRNRNKDDGKKLEDKGIDE 281
Query: 468 ----DQSVSAYIYHRLLG----------HNVDE--VLFRCHLPKH----------FSAPN 501
D+ S Y +G ++DE +F L H FS+PN
Sbjct: 282 GKDPDKKKSMYGVEGDVGVDRRKGVRAKKSLDEGPSIFEYILKGHKEGIGNFDHIFSSPN 341
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
LP LN SQ AV+ A+ R ++LIQGPPGTGKT+ S+ IVY LV+ G VLV APSN AV
Sbjct: 342 LPKLNASQEVAVRAALGRKVTLIQGPPGTGKTLVSSAIVYNLVRHYGGKVLVVAPSNTAV 401
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
DQLT KIH+TGL+V+RV ++ RE S VSFL+LH +R EL++ + K+E +
Sbjct: 402 DQLTLKIHKTGLRVLRVMSRRREYGQSDVSFLSLHENLR------ELQEGRKRKDE--DH 453
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
S D + ++ +K LL+ A+VI CTCV +G + KFH +LIDE++Q+TEP +
Sbjct: 454 SRYDSIYNDEVNESLKKQLLNQAEVITCTCVTSGQKMFNRFKFHCVLIDEAVQSTEPLSL 513
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPE 741
+P++ G K+L+LVGDH QLGP ++CKK A+AG QSLFERL+ +G+ P+ L VQYRM +
Sbjct: 514 IPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISIGVVPYMLSVQYRMDAD 573
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
L ++PS FY G L G + + D PV FYV G+EE++ SGTS+VN+
Sbjct: 574 LCEWPSEMFYNGELLTG----GKNFCRFDLGIPVN----FFYVCYGREEVSASGTSFVNQ 625
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
EA E I +CG+ QIGVITPYEGQR++++ + G+ P +E+++VD
Sbjct: 626 AEALYCESIIRHLFKCGVTESQIGVITPYEGQRSYILNRI--FGAEPG----NLEISNVD 679
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
FQGREKD II+S VRSN +QGIGF+ D RR+NV LTRAK+G+++IGNP L K +W N
Sbjct: 680 GFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGNPMTLMKHDMWGN 739
Query: 922 LLNFYKEQKVLVEGPLNNLKESLILFSKPKQYF 954
LL+FY + +++EGPL+NLK +I KP + F
Sbjct: 740 LLSFYDRKGLVMEGPLHNLKRVII---KPPKLF 769
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 144/363 (39%), Gaps = 120/363 (33%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C+YC +I C C K FCN R +S SHI+ HLV+AKHK + ++ D ++
Sbjct: 9 CQYC--EAAELLIECITCGKCFCNSRSASSISHIVFHLVKAKHKSIRINGD-------IK 59
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
C CG N+F L +N K K L+ +R +
Sbjct: 60 CRKCGEDNLFKL--------------------LENGGKIFCNGCSSGKMLVEERCLT--I 97
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
VK P Q GR++T Q+A++EE V PH V R+E +Y
Sbjct: 98 VKSPEVQ----GRRLTKQQMAEMEE---------------RNVSPLPH-VKPRFE-AKEY 136
Query: 282 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFG 341
+F L++ E ++ +KES QENV VRW+ K YF D +
Sbjct: 137 VEVFSSLIEAECRKEREIKESMRQENVFVRWE----KMKYCYFYFQNGDSE--------- 183
Query: 342 PLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYS 401
++ +VG ++RL L L +
Sbjct: 184 -----------------------LKINVG---------------DEIRLTHKSGLVL-HG 204
Query: 402 YDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLAL 461
+ + +T+S +E+ +E+++ P +G++V+++W+ ++RM AL
Sbjct: 205 FVSGETFS-------------EELKVEIETPGDYP---RSGYTVEYLWRGVCYERMVWAL 248
Query: 462 RKF 464
+K
Sbjct: 249 KKL 251
>gi|300708470|ref|XP_002996413.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
gi|239605714|gb|EEQ82742.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
Length = 683
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 266/651 (40%), Positives = 384/651 (58%), Gaps = 79/651 (12%)
Query: 294 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKR 353
D K+L + Q E + ++S Y + K+ + +Y NIF L+ E +K
Sbjct: 100 DKGKKLTKQQMTE---------IEEQSSDYLPVIKSRFEPEEYVNIFSALIDAECQKEKE 150
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGH 413
+KES Q NV VRW+ N K YF ++D D+++ GDE+KL + SGL
Sbjct: 151 IKESMKQSNVVVRWE---NMK-FGYFYFQRSDADLKINIGDEIKLTHK-------SGLII 199
Query: 414 VIKIP-DNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVS 472
I D+F +E+ E+ P +G+++++IW+ ++RM+ AL K
Sbjct: 200 TGFISNDSFTEELKFEVDHYGDYPR---SGYTIEYIWRGVCYERMKWALNK--------- 247
Query: 473 AYIYHRLLGHNVDEVLFRCHL---PKHF--------SAPNLPDLNRSQVYAVKHAIQRPL 521
+Y+ L N +E+ +L K + + PN+P LN+ Q +VK A+ R +
Sbjct: 248 --LYNMYLRKNTNEMTLYEYLIRGGKEYVNNNIELETVPNMPKLNKFQEISVKAALSRKV 305
Query: 522 SLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAK 581
+LIQGPPGTGKT+ SA IVY +K+ VLV APSN AVDQLT K+H+TGLKV+RV ++
Sbjct: 306 TLIQGPPGTGKTLVSAAIVYNYIKKFKGKVLVVAPSNTAVDQLTLKVHKTGLKVIRVMSR 365
Query: 582 SREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
RE S V+FL+LH ++ +L+ + + +E E +N +K LL
Sbjct: 366 RREYTQSDVNFLSLHENVK------DLQTMCNMSDEEDE-------------ENIKKRLL 406
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLG 701
+ ADVI CTCV AG K+KF +L+DE++Q+TEP ++P++ G +LILVGDH QLG
Sbjct: 407 NQADVITCTCVTAGQKMFNKMKFSCVLVDEAVQSTEPLNIIPLVYGCTKLILVGDHKQLG 466
Query: 702 PVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
P ++CKK A+AG QSLFERL++LGI P+ L +QYRMH +L ++PS FY G LQ G
Sbjct: 467 PTILCKKVAKAGFKQSLFERLILLGISPYILSLQYRMHADLCEWPSETFYNGELQTG--- 523
Query: 762 DERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKP 821
R K++ P FY G+EE++ SGTS+VN EA E I + G+
Sbjct: 524 -NRLFYKLNIGIP----HNFFYACYGKEEVSTSGTSFVNPMEALYCESIIRHLFKSGITE 578
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+QIGVITPYEGQR+ ++ + GS P +E+++VD FQGREKD II+S VRSN +
Sbjct: 579 KQIGVITPYEGQRSHILNRI--FGSEPG----NLEISNVDGFQGREKDYIIVSLVRSNLY 632
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
QGIGF+ D RR+NVALTRAK+G+I+IGNP + K W +LL FY+++ +
Sbjct: 633 QGIGFVGDKRRMNVALTRAKHGLIIIGNPNTMIKHDAWKSLLEFYEKKDLF 683
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 94/232 (40%), Gaps = 55/232 (23%)
Query: 102 CKYCGIHDPAY-VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
CKYC D Y ++ C+ C FCN R +S SHII HLV+ KHK + + +
Sbjct: 3 CKYC---DLEYSLVECSTCNIKFCNSRSLSSISHIIFHLVKTKHKSIKIDNKDVI----- 54
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
C C NIF L + C+ C+ + LI D L+
Sbjct: 55 -CIKCKEDNIFKLRKYNEN------IFCK-KCS-------------DYGDLIVDERCLT- 92
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
LV P +G+++T Q+ ++EE D E +
Sbjct: 93 LVDSPC---IDKGKKLTKQQMTEIEEQSSDYLPVIKSRFEPE-----------------E 132
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
Y NIF L+ E +K +KES Q NV VRW+ N K YF ++D D
Sbjct: 133 YVNIFSALIDAECQKEKEIKESMKQSNVVVRWE---NMK-FGYFYFQRSDAD 180
>gi|367025919|ref|XP_003662244.1| hypothetical protein MYCTH_106618 [Myceliophthora thermophila ATCC
42464]
gi|347009512|gb|AEO56999.1| hypothetical protein MYCTH_106618 [Myceliophthora thermophila ATCC
42464]
Length = 662
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 233/482 (48%), Positives = 302/482 (62%), Gaps = 67/482 (13%)
Query: 50 QLDSVNQIQVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHD 109
Q D N+ +V + +++ + K ++ EEE KELP HAC YCGIH
Sbjct: 58 QDDDDNETEVFDDDDESLASVPVDGMKALKMNAPEEE--------KELPAHACAYCGIHS 109
Query: 110 PAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRN 169
PA V+ C C KWFC+ RG++S SHI+NHLVRA+HKEV LH LG+TVLECY CG +N
Sbjct: 110 PASVVKCLTCSKWFCSARGNSSSSHIVNHLVRARHKEVQLHPQSSLGDTVLECYNCGTKN 169
Query: 170 IFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQE 229
+F+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W+PLI DRSFL+WLV+ PT+ E
Sbjct: 170 VFMLGFIPAKSDTVVVLLCRQPCAASTSTKDMSWDITRWQPLIEDRSFLNWLVQPPTDTE 229
Query: 230 QQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLRYEDGYQYQNIFGPL 288
Q R R +T IAKLEE+WK++ AT DLEK G D+DPH VLL+YED Y YQNIFGPL
Sbjct: 230 QLRARHLTPPMIAKLEEMWKESPNATVADLEKSAGADDDPHPVLLKYEDPYHYQNIFGPL 289
Query: 289 VKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEA 348
VK+E+DYDK+LKE+Q+++N+ VRWDVGLN K +A F L K
Sbjct: 290 VKMESDYDKKLKEAQSEDNLQVRWDVGLNNKHLASFILPKI------------------- 330
Query: 349 DYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTW 408
E+ V+ VG DE++L+Y D W
Sbjct: 331 ------------ESGDVKLAVG-----------------------DEMRLKYKGDLRPPW 355
Query: 409 SGLGHVIKIPDNFGDEVGLELKSSAG---APTEATTGFSVDFIWKSTSFDRMQLALRKFA 465
G+G+VIKIP+N DEV LEL+ SA PT+ T FS D++WK+TS+DRMQ A++ FA
Sbjct: 356 EGVGYVIKIPNNQSDEVTLELRKSANDKMVPTDVATNFSADYVWKATSYDRMQFAMKTFA 415
Query: 466 VDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQ 525
VD+ S+S YI+H+LLGH V + +PK+F P LP+LN SQV A+K RP + +
Sbjct: 416 VDEMSLSGYIFHKLLGHEVAVAPMKIQMPKNFHVPGLPELNHSQVTAIK-TFSRPKTSFR 474
Query: 526 GP 527
P
Sbjct: 475 PP 476
>gi|367038941|ref|XP_003649851.1| hypothetical protein THITE_130005 [Thielavia terrestris NRRL 8126]
gi|346997112|gb|AEO63515.1| hypothetical protein THITE_130005 [Thielavia terrestris NRRL 8126]
Length = 1196
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/483 (48%), Positives = 302/483 (62%), Gaps = 82/483 (16%)
Query: 52 DSVNQIQVNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPA 111
+S++ +QV+G + L +L EEE KELP HAC YCGIH PA
Sbjct: 73 ESLSSVQVDGMKGL-------------KLNGPEEE--------KELPAHACAYCGIHSPA 111
Query: 112 YVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIF 171
V+ C C KWFC+ RG++S SHI+NHLVRA+HKEV LH LG+TVLECY CG++N+F
Sbjct: 112 SVVKCLTCNKWFCSARGNSSSSHIVNHLVRARHKEVQLHPQSSLGDTVLECYNCGIKNVF 171
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQ 231
LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W+PLI +R+FL+WLV+ PT+ EQ
Sbjct: 172 TLGFIPAKSDTVVVLLCRQPCAASTSTKDMSWDISRWQPLIENRTFLNWLVQPPTDAEQL 231
Query: 232 RGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLRYEDGYQYQNIFGPLVK 290
R R +T IAKLEE+WK AT DLEK VD+DPH VLL+Y+D Y YQNIFGPLVK
Sbjct: 232 RARHLTPPMIAKLEEMWKVAPGATVADLEKRASVDDDPHPVLLKYDDPYHYQNIFGPLVK 291
Query: 291 LEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADY 350
+E+DYDK+LKE+Q+++N+ V+WD GL K +A F L K
Sbjct: 292 MESDYDKKLKEAQSEDNLQVKWDYGLENKHVAIFVLPKI--------------------- 330
Query: 351 DKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSG 410
E+ V+ VG DE++L+Y D W G
Sbjct: 331 ----------ESGDVKLAVG-----------------------DEMRLKYKGDLRPPWEG 357
Query: 411 LGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVD 467
+G+V KIP+N DEV LEL+ S PT+ TT FS D++WK+TS+DRMQLA++ FAVD
Sbjct: 358 VGYVTKIPNNQNDEVHLELRKSGNDKAVPTDVTTNFSADYVWKATSYDRMQLAMKTFAVD 417
Query: 468 DQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLS---LI 524
+ SVS YI+H+LLGH V V + +PK F AP LP+LN SQ+ A+K + PL+ L+
Sbjct: 418 EMSVSGYIFHKLLGHEVALVPMKTPMPKKFHAPGLPELNHSQITAIKTVLSTPLNHKCLV 477
Query: 525 QGP 527
+GP
Sbjct: 478 EGP 480
>gi|307104875|gb|EFN53127.1| hypothetical protein CHLNCDRAFT_137486 [Chlorella variabilis]
Length = 949
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/433 (53%), Positives = 295/433 (68%), Gaps = 41/433 (9%)
Query: 529 GTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDS 588
G G T T + L K VLV APSNIAVD L E+ +TGL+VVR+ A+SREA+ +
Sbjct: 378 GQGSAPTDVTTGF-LAKMGQGQVLVSAPSNIAVDHLAERTSQTGLRVVRLQARSREAVAT 436
Query: 589 PVSFLALHNQIRNMEM--NSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADV 646
V L LH Q+ ++++ EL+KL LKEE GEL++ADE++Y+ LK++ E+ +L ADV
Sbjct: 437 TVEHLTLHYQVEHLDIPEAQELRKLRLLKEELGELAAADERKYKALKRSLEREILQAADV 496
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
+C TC G GD RL +F +LIDE+ QA EPE M+P+++GAKQLILVGDHCQLGPV++
Sbjct: 497 VCATCAGVGDSRLTNFRFRRLLIDEATQAVEPEAMIPLVMGAKQLILVGDHCQLGPVIIN 556
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
K AARAGLSQSLFERL++LG++P RL V +FPSN FYEG+LQNGV ER
Sbjct: 557 KVAARAGLSQSLFERLMLLGVKPIRLAVH--------EFPSNTFYEGALQNGVTVAERTR 608
Query: 767 SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
+ + FPWP DKP +FYV G EEI+ SGTSY+NRTEA++VEKI T ++ G+ P QIG+
Sbjct: 609 TNVLFPWPT-DKPCMFYVQLGAEEISASGTSYLNRTEAASVEKIVTYLLKSGVSPAQIGI 667
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPYEGQRA +V M G + +Y EIE ASVD+FQGREKD II+SCVRSN+HQGIGF
Sbjct: 668 ITPYEGQRAHVVTVMTRSGPMRQALYAEIECASVDSFQGREKDYIILSCVRSNEHQGIGF 727
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
L DPRRLNVALTRAKYG++ GPL NLK+S++
Sbjct: 728 LADPRRLNVALTRAKYGLV-----------------------------GPLTNLKQSMVQ 758
Query: 947 FSKPKQYFKKNNM 959
+P++ F +
Sbjct: 759 LQRPRRLFDAGSF 771
Score = 325 bits (833), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 196/498 (39%), Positives = 263/498 (52%), Gaps = 99/498 (19%)
Query: 13 LTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLNL 72
+FLD +T GG G+ D+ D +LP QASQ+ + Q + LD +
Sbjct: 29 FSFLDFNQTQEAGG--AGAFDDYADLSLP-----QASQVPTFQPTQGDAALGLDVA---- 77
Query: 73 VSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSG 132
L EL F++ ++ ELP YCGIH+PA V+ C KWFCNGR +
Sbjct: 78 ----LGELAFQDAAEEAAPEQPTELP----DYCGIHNPACVVKCLTTGKWFCNGRVTGTA 129
Query: 133 SHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPC 192
S II HLV+AK KEV LHKD PLGETVLECY+ G RN+F LGF+P K ++ VVLL R
Sbjct: 130 SCIITHLVKAKLKEVGLHKDSPLGETVLECYSSGSRNVFALGFVPLKDENTVVLLARDTP 189
Query: 193 AAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
A +KD+N D QW+PLI DR+F++WLVK P E E R R ++ Q+ +LEEVW+ N
Sbjct: 190 PAAPGIKDLNIDMTQWQPLIEDRAFVAWLVKAPGEHEVLRARHLSVHQVTRLEEVWRSNP 249
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
A+ ++L +PG +E+P V LR YD
Sbjct: 250 GASVEELSQPGKEEEPCPVALR--------------------YD---------------- 273
Query: 313 DVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
D YQYQNIFGPL+KLEADYDK +KE+Q +ENVTV W VGLN
Sbjct: 274 -------------------DAYQYQNIFGPLIKLEADYDKAMKENQVRENVTVHWGVGLN 314
Query: 373 KKSIAYFSLAKTDGDMRLMQGDELKLRYS--YDASKTWSGLGHVIKIPDNFGDEVGLEL- 429
KK +A F K DMRLM GDEL+LR+ S W G+G V ++ D+ +EV +EL
Sbjct: 315 KKVVARFYYPKDSADMRLMIGDELRLRHPCPRAGSPPWVGIGFVSRL-DDASEEVAIELR 373
Query: 430 ---KSSAGAPTEATTGF-----------------SVDFIWKSTSFDRMQLALRKFAVDDQ 469
K APT+ TTGF +VD + + TS +++ +R A +
Sbjct: 374 GKEKGQGSAPTDVTTGFLAKMGQGQVLVSAPSNIAVDHLAERTSQTGLRV-VRLQARSRE 432
Query: 470 SVSAYIYHRLLGHNVDEV 487
+V+ + H L + V+ +
Sbjct: 433 AVATTVEHLTLHYQVEHL 450
>gi|396082359|gb|AFN83969.1| putative DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 779
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 268/705 (38%), Positives = 392/705 (55%), Gaps = 104/705 (14%)
Query: 316 LNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKS 375
+ +K++ K + +Y +F L++ E ++ +KES QENV VRW+ K
Sbjct: 110 MEEKNVPSLPQVKPRFEAGEYVEVFSSLIEAECRKEREIKESMRQENVFVRWE----KMK 165
Query: 376 IAYFSLAKTDGDMRLMQGDELKL--------------------------------RYSYD 403
YF D ++++ GDE++L R Y
Sbjct: 166 YCYFYFQNGDNELKINIGDEIRLTHKSGFVLNGFVSGETFSEELKVEVEIPGDYPRSGYT 225
Query: 404 ASKTWSGLGH------VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDF---IWKSTSF 454
W G+ + + K+ + + E+G K+ + + +D + K
Sbjct: 226 VEYLWRGVCYERMEWALRKLYNTYKKEIGKNKKNKSNNDEKGLHEEEIDANRSLGKRKPL 285
Query: 455 D----------RMQLALRKFAVDDQSVSAYIYHRLLGH-----NVDEVLFRCHLPKHFSA 499
D R +K + S+ YI L G+ N+D + FS
Sbjct: 286 DCIEGRNGPDGRKATKAKKNLNEGPSIFEYI---LKGYKEGISNIDHI---------FSP 333
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
PNLP LN SQ AV+ A+ R ++LIQGPPGTGKT+ S++IVY VK G VLV APSN
Sbjct: 334 PNLPKLNTSQETAVRAALGRKVTLIQGPPGTGKTLVSSSIVYNFVKHYGGKVLVVAPSNT 393
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVDQLT KIH+TGLKV+RV ++ RE S VSFL+LH +R EL++ + K+E
Sbjct: 394 AVDQLTLKIHKTGLKVLRVMSRRRECGQSDVSFLSLHENLR------ELQEGRKKKDE-- 445
Query: 620 ELSSADEKRYRML-----KKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
D RY + ++ +K LL+ A+VI CTCV +G K +FH +LIDE++Q
Sbjct: 446 --GCRDNGRYNSIYNDEVSESLKKQLLNQAEVITCTCVTSGQKMFNKFRFHYVLIDEAVQ 503
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEV 734
+TEP ++P++ G K+L+LVGDH QLGP ++CKK A+AG QSLFERL+ +G+ P+ L +
Sbjct: 504 STEPLSLIPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISIGVVPYVLSI 563
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
QYRM +L ++PS FY G L G ++ + D P FYV G+EE++ S
Sbjct: 564 QYRMDTDLCEWPSEMFYNGELLTG----GKRFCRFDLGIPTN----FFYVCYGREEVSAS 615
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
GTS++N+ EA E I +CG+ QIGVITPYEGQR++++ + G+ P
Sbjct: 616 GTSFINQAEALYCESIIRHLFKCGVTENQIGVITPYEGQRSYILNRI--FGAEPGN---- 669
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
+E+++VD FQGREKD II+S VRSN +QGIGF+ D RR+NV LTRAK+G+++IGNP L
Sbjct: 670 LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVTLTRAKHGLVIIGNPTTLM 729
Query: 915 KQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
K +W+NLL+FY ++ +++EGPL+NL+ +I KP + F M
Sbjct: 730 KHDMWSNLLSFYDKKGLVMEGPLHNLRRVII---KPPKLFDFKEM 771
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 102/231 (44%), Gaps = 56/231 (24%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C+YC ++I C C K FCN +S SHI+ HLV+A+HK + + D ++
Sbjct: 3 CQYC--EAAEFLIECITCGKHFCNSHSASSISHIVFHLVKARHKSIRIGGD-------IK 53
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
C CG N+F L DS + C C + + L+ +R +
Sbjct: 54 CRKCGEDNLFKL------LDSNGKIFC-NACGS-------------GRTLVEERCLT--I 91
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
+K P Q GR++T Q+A++EE V P QV R+E G +Y
Sbjct: 92 IKSPEVQ----GRRLTKQQMAEMEE---------------KNVPSLP-QVKPRFEAG-EY 130
Query: 282 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
+F L++ E ++ +KES QENV VRW+ K YF D +
Sbjct: 131 VEVFSSLIEAECRKEREIKESMRQENVFVRWE----KMKYCYFYFQNGDNE 177
>gi|67481561|ref|XP_656130.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56473310|gb|EAL50744.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704720|gb|EMD44907.1| Hypothetical protein EHI5A_012990 [Entamoeba histolytica KU27]
Length = 937
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 272/672 (40%), Positives = 374/672 (55%), Gaps = 64/672 (9%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI-----AYF------S 380
D QY + + PL++LEA+ D++ +ES+ N+T+ +D +K I A F
Sbjct: 176 DCKQYYHTYYPLIRLEAEADRQKRESEHLTNMTLTFDGTRTEKDIKKVVHATFQVPLNEE 235
Query: 381 LAKTDGDMRL----MQGDELKLRYSYDAS-------KTWSG------LGHVIKIPDNFGD 423
++ T D+ M+ + + ++ S K + G +G V I G
Sbjct: 236 ISITPSDVLFFYVPMKNKSIDVHEIHNYSEFNEHERKEFIGKINTFLVGGVQSIN---GK 292
Query: 424 EVGLELKSSAGAPTEATT--------GFSVDFIWKSTSFDRMQLALRKFAVDDQ-----S 470
+V + L A P E +S+ F W S F R + AL F + S
Sbjct: 293 DVTVLLSRQADIPIEKQIVTPQNQQFKYSICFQWLSIPFHRKKEALLDFCRTENEPIEAS 352
Query: 471 VSAYIYHRLLGHNVDEV------LFR----CHLPKH-----FSAPNLPDLNRSQVYAVKH 515
+S Y+ RLLG + E+ F+ +L H SAPNLP LN+ Q V+
Sbjct: 353 MSKYLRDRLLGMPITEMDRQMEQQFKEEKEMYLNSHPTEASLSAPNLPPLNQVQFDVVRK 412
Query: 516 AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT-GSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+ + LSLIQGPPGTGKTVTSATIVY +V+ G VLVCAPSNIAVDQL KI TG+K
Sbjct: 413 SFTKQLSLIQGPPGTGKTVTSATIVYHVVQSNPGKKVLVCAPSNIAVDQLGTKITETGVK 472
Query: 575 VVRVCAKSREAIDSPVSFLALHNQIR-NMEMNSELKKLLQ-LKEETGELSSADEKRYRML 632
V+RV +KSRE D + +L + ++ + E+ L Q K++ L +
Sbjct: 473 VIRVYSKSRETEDESLYDYSLKTLMEEKLKKDKEMFALYQEYKDDPDSLDFVSTATIQKR 532
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH--SILIDESMQATEPECMVPVILGAKQ 690
E SLL DVICCTC GA D RL I H ++LIDES QA EPEC++ + KQ
Sbjct: 533 INQIELSLLRETDVICCTCCGALDTRLSGILEHIDTVLIDESTQADEPECLICLNNSVKQ 592
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
L LVGDHCQLGP++ +A + GL +F RL+ LG P+RL+ QYRMHP LS+F S F
Sbjct: 593 LFLVGDHCQLGPILNSSRAKKYGLGLPMFSRLLQLGHEPYRLQFQYRMHPCLSEFSSQTF 652
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
Y+G LQNGV A ER+ + + W +KPM+F G+E +GTSY+N E +E+I
Sbjct: 653 YDGVLQNGVTALERQFPSLKYFWFKQNKPMMFIAANGKESYGSNGTSYINDEEVFIIEQI 712
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
+ + + P QIGVITPY Q+ ++ + + +IE+ASVD+FQGREKD
Sbjct: 713 IIKMLGNKVSPSQIGVITPYIAQKQAIISRLSLNRRISEAQLNDIEIASVDSFQGREKDF 772
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
II S VRSN+ IGFL+ P+RLNV++TRAKYG++V+GNP+ L + PLW L F++
Sbjct: 773 IIFSTVRSNEISDIGFLSIPQRLNVSITRAKYGLVVVGNPETLMQNPLWCAYLQFFQNNN 832
Query: 931 VLVEGPLNNLKE 942
VLV G L NLKE
Sbjct: 833 VLVHGQLENLKE 844
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 119/221 (53%), Gaps = 12/221 (5%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C YCG+ D +I C C K+FCNG G+ SHII+H KHK D + ++
Sbjct: 11 CWYCGLADKKKLIRCG-CGKYFCNGTGNGKVSHIIHHASSLKHK------DLKYSDEYIQ 63
Query: 162 CYTCGVRNIFVLGFIPAKADS-VVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
C C RN FVLGFI K +S + LCRT C ++K++ WD + W ++ + F++
Sbjct: 64 CNLCKTRNPFVLGFIQVKQNSDMTTCLCRT-CRYNTTIKNLGWDVDSWTSIVCEGKFVNE 122
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQ 280
+ P+ +E + ++ ++ K+ ++N + ++ E E+ H + L Y D Q
Sbjct: 123 ICPQPSNEEMSIVQSISYQKMRKMAWELQNNRKKFEEETET---FEELHPIYLNYHDCKQ 179
Query: 281 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSI 321
Y + + PL++LEA+ D++ +ES+ N+T+ +D +K I
Sbjct: 180 YYHTYYPLIRLEAEADRQKRESEHLTNMTLTFDGTRTEKDI 220
>gi|429961769|gb|ELA41314.1| hypothetical protein VICG_01687 [Vittaforma corneae ATCC 50505]
Length = 575
Score = 434 bits (1116), Expect = e-118, Method: Compositional matrix adjust.
Identities = 252/614 (41%), Positives = 362/614 (58%), Gaps = 70/614 (11%)
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDE 395
Y + F PL+ E ++ +KE+ QEN+T+ D K F + KT+ D ++ GDE
Sbjct: 8 YLSTFIPLINAECRKEQEIKENMKQENMTLLIDGCYCK-----FIVQKTNSDFKVNVGDE 62
Query: 396 LKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT------TGFSVDFIW 449
LK + S +G+V + + F D + +++ + P+ T G++V+FIW
Sbjct: 63 LK----FSQRPGLSFVGYVCE--EQFSDLIRVKIDVDS-LPSGHTLENIPRNGYTVEFIW 115
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL--PKHFSAPNLPDLNR 507
T+++RM+ AL+ +S + + Y + V E + + PK F A LN+
Sbjct: 116 NPTTYNRMKNALQSLYNKKKSNTIFKY---ILKGVKETMKEIEVFQPKKFFA-----LNQ 167
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQ AVK A+ R L+LIQGPPGTGKT+ SA IVY LVK G VLV APSN A DQL K
Sbjct: 168 SQEIAVKAALTRTLTLIQGPPGTGKTMVSAVIVYNLVKHYGKKVLVVAPSNTAADQLAIK 227
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEK 627
I+ TGLKV+R+ +K RE + + V FL LH + ++S
Sbjct: 228 INDTGLKVLRIMSKRREDVSTDVDFLCLHKLLNEFFIDS--------------------- 266
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
K ++++LL+ A+V+CCTCV AG L + +F +LIDE++Q+TEP +VP +
Sbjct: 267 -----KNASQRNLLEMAEVVCCTCVTAGQKILKEFEFPFVLIDEAVQSTEPLSLVPCVYS 321
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
++LILVGDH QLGP ++ K + G QSLFERL+ +G+ P+ L VQYRMHP+L FPS
Sbjct: 322 PEKLILVGDHKQLGPTILNKDVVKYGFKQSLFERLLRIGVMPYLLSVQYRMHPDLCAFPS 381
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
+FY G L++G + +D P FYV G+EEI+ S TS+ N++EA V
Sbjct: 382 EYFYNGLLKSGTSTSKV----LDLP------NNFFYVCDGKEEISQSRTSFFNKSEAVIV 431
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
E I + G+ +QIGVITPYEGQR++++ G + +E+ +VD FQGRE
Sbjct: 432 ENIIRFLFKNGVLEQQIGVITPYEGQRSYIL------GQIFGNEAGNLEIKNVDGFQGRE 485
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II+S VRSN QG+GF+ D RR+NV LTRAK+G+I+IGNP L K +W +LLN+Y
Sbjct: 486 KDFIIVSLVRSNIFQGVGFVGDKRRMNVTLTRAKHGLIIIGNPFTLYKNEMWADLLNWYD 545
Query: 928 EQKVLVEGPLNNLK 941
E+ ++ EGPLN+LK
Sbjct: 546 ERGLVYEGPLNSLK 559
>gi|426199843|gb|EKV49767.1| hypothetical protein AGABI2DRAFT_190222 [Agaricus bisporus var.
bisporus H97]
Length = 463
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/277 (71%), Positives = 236/277 (85%)
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAARAGL+QSLFERLVVLG RP RL+VQYRMHP
Sbjct: 1 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 60
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEG+LQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++N
Sbjct: 61 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 120
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEASNVEKI T+F + G+ P QIG++TPYEGQR+++V +MQ+ GSL +Y+EIEVASV
Sbjct: 121 RTEASNVEKIVTKFFKSGVVPNQIGIVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASV 180
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW+
Sbjct: 181 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWH 240
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
LL YKE+ LVEGPLNNL+ S+I FSKP++ K+
Sbjct: 241 YLLTHYKEKNCLVEGPLNNLQPSMIQFSKPRKSLAKS 277
>gi|409082016|gb|EKM82374.1| hypothetical protein AGABI1DRAFT_111018 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 463
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/277 (71%), Positives = 236/277 (85%)
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
M+P++LG KQ++LVGDH QLGPV+M KKAARAGL+QSLFERLVVLG RP RL+VQYRMHP
Sbjct: 1 MIPLVLGCKQVVLVGDHQQLGPVIMNKKAARAGLTQSLFERLVVLGNRPIRLQVQYRMHP 60
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS+FPSN FYEG+LQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++N
Sbjct: 61 CLSEFPSNMFYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLN 120
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEASNVEKI T+F + G+ P QIG++TPYEGQR+++V +MQ+ GSL +Y+EIEVASV
Sbjct: 121 RTEASNVEKIVTKFFKSGVVPNQIGIVTPYEGQRSYIVNYMQFNGSLKKDLYKEIEVASV 180
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW+
Sbjct: 181 DAFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWH 240
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
LL YKE+ LVEGPLNNL+ S+I FSKP++ K+
Sbjct: 241 YLLTHYKEKNCLVEGPLNNLQPSMIQFSKPRKSLAKS 277
>gi|402470074|gb|EJW04529.1| hypothetical protein EDEG_01257 [Edhazardia aedis USNM 41457]
Length = 534
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/518 (44%), Positives = 318/518 (61%), Gaps = 61/518 (11%)
Query: 479 LLGHNVDEVLFRCHLPKHFSA------------PNLPDLNRSQVYAVKHAIQRPLSLIQG 526
+LG N E + H + S PNLP LN SQ AVK A+ L+LIQG
Sbjct: 19 ILGTNYTEDSHKTHATRFLSTQNLYSAYTILTPPNLPFLNSSQQIAVKAALHNQLTLIQG 78
Query: 527 PPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAI 586
PPGTGKTVT A +VY LVKQ VLV + SN A+D L KIH + LKV+R+ +K RE
Sbjct: 79 PPGTGKTVTCAAVVYNLVKQFKGKVLVVSNSNTAIDHLAVKIHHSALKVIRIVSKRRENC 138
Query: 587 DSPVSFLALHNQIR--------------------------NMEMNSELKKLLQL-----K 615
+ FL+LH Q + N E +K K
Sbjct: 139 SDELEFLSLHMQAKILLKEEKKRGKTKRSTKNTAELSEDSNTENQYSVKDTFNANKDRKK 198
Query: 616 EETGELSSA---DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
+T L S D +Y+M++K +LDNADVICCTCV +G L K +LIDE+
Sbjct: 199 SKTAHLESNSDDDALKYKMMRK-----ILDNADVICCTCVTSGQKILKKYDIPYVLIDEA 253
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL 732
+Q TEP ++P+ G ++LILVGDH QLGP+++ KKAA+AGL ++LFERL+ LG PF L
Sbjct: 254 VQCTEPLSIIPLAYGCRKLILVGDHKQLGPIILDKKAAKAGLKETLFERLIKLGNLPFLL 313
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+QYRMHP+L+++PSN FYEGSL+NG+ ++ ++L++ P+P FYV G EE++
Sbjct: 314 NMQYRMHPKLAEWPSNTFYEGSLKNGI-SESKRLNRTVLPFPT-----FFYVCYGLEELS 367
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
SGTSY+N+TEA E+I ++ G+ +QIGVITPYEGQR F++ + + SL
Sbjct: 368 ASGTSYLNQTEALVTEEIIKSLVKSGISEKQIGVITPYEGQRVFILNRLT-KTSLK---L 423
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
+ +E+ +VDA+QGREKD II+S VRSN QGIGFLND RRLNV LTRAKYG +IGNP
Sbjct: 424 ENLEIKNVDAYQGREKDYIIISLVRSNQKQGIGFLNDERRLNVTLTRAKYGCCIIGNPNT 483
Query: 913 LSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKP 950
L K +W N +NFY+++ ++ +G + L++++++ P
Sbjct: 484 LYKNKMWANFINFYQDRDMIYKGSVECLEKAIVVKKSP 521
>gi|303391232|ref|XP_003073846.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302994|gb|ADM12486.1| putative DNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 779
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/463 (47%), Positives = 308/463 (66%), Gaps = 32/463 (6%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
F P+LP LN SQ AV+ A+ R ++LIQGPPGTGKT+ S+ IVY LVK G VLV AP
Sbjct: 331 FPVPDLPRLNASQEIAVRAALGRKVTLIQGPPGTGKTLVSSAIVYNLVKHYGGKVLVVAP 390
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
SN AVDQLT KIH+TGL+V+RV ++ RE S V+FL+LH ++ EL++ + K+
Sbjct: 391 SNTAVDQLTLKIHKTGLRVLRVMSRRRECGQSDVNFLSLHENLK------ELQEGRKKKD 444
Query: 617 ETGELSSADEKRYRML-----KKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDE 671
E D RY + ++ +K LL+ A+VI CTCV +G K +FH +LIDE
Sbjct: 445 EC----YGDHNRYNSIYNDETNESLKKHLLNQAEVITCTCVTSGQKMFNKFRFHYVLIDE 500
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
++Q+TEP ++P++ G K+L+LVGDH QLGP ++CKK A+AG QSLFERL+ +G+ P+
Sbjct: 501 AVQSTEPLSLIPLVYGCKKLVLVGDHKQLGPTILCKKVAQAGFKQSLFERLISIGVVPYV 560
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEI 791
L VQYRM +L ++PS FY G L G + + D P FYV G+EE+
Sbjct: 561 LSVQYRMDADLCEWPSEMFYNGELLTG----GKNFCRFDLGIPTN----FFYVCYGREEV 612
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI 851
+ SGTS+VN+ EA + E I +CG+ QIGVITPYEGQR++++ + G+ P
Sbjct: 613 SPSGTSFVNQAEALHCESIIRHLFKCGVTENQIGVITPYEGQRSYILNRI--FGAEPGN- 669
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPK 911
+E+++VD FQGREKD II+S VRSN +QGIGF+ D RR+NV LTRAK+G+++IGNP
Sbjct: 670 ---LEISNVDGFQGREKDFIIVSLVRSNLYQGIGFVGDKRRMNVMLTRAKHGLVIIGNPM 726
Query: 912 VLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYF 954
L + +W+NLL+FY + +++EGPL+NL+ +I KP + F
Sbjct: 727 TLMRHDMWSNLLSFYDRKGLVMEGPLHNLRRVVI---KPPKLF 766
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 24/169 (14%)
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
KRL + Q E + +KS+A K+ + +Y +F L++ E ++ +KE
Sbjct: 100 KRLTKQQMAE---------MEEKSMASLPYVKSRFEAKEYVEVFSSLIEAECKKEREIKE 150
Query: 357 SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLG-HVI 415
S QENV VRW+ K YF D ++++ GDE++L + SG H
Sbjct: 151 SMRQENVFVRWE----KLKYCYFYFQNGDSELKINIGDEIRLTHK-------SGFVLHGF 199
Query: 416 KIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKF 464
+ F +E+ +E+++ P +G++V+++W+ ++RM+ ALRK
Sbjct: 200 VSGETFSEELKVEIETPGDYP---RSGYTVEYLWRGICYERMEWALRKL 245
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 56/231 (24%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C+YC + + +I C C K FCN R +S SHI+ HLV+AKHK + + D ++
Sbjct: 3 CQYCEVEE--LLIECVGCGKHFCNSRSASSISHIVFHLVKAKHKSIRIGGD-------IK 53
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
C CG N+F L +N+ K + ++ +R +
Sbjct: 54 CRKCGEDNLFKL--------------------LENNGKIFCNGCSSGRMVVEERCLT--I 91
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
+K P Q G+++T Q+A++EE K A + V R+E +Y
Sbjct: 92 IKSPEVQ----GKRLTKQQMAEMEE--KSMASLPY--------------VKSRFE-AKEY 130
Query: 282 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
+F L++ E ++ +KES QENV VRW+ K YF D +
Sbjct: 131 VEVFSSLIEAECKKEREIKESMRQENVFVRWE----KLKYCYFYFQNGDSE 177
>gi|118489512|gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 582
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/251 (73%), Positives = 220/251 (87%)
Query: 705 MCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
MCKKAARAGL+QSLFERLV+LG++P RL+VQYRMHP LS+FPSN FYEG+LQNGV +ER
Sbjct: 1 MCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNER 60
Query: 765 KLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
+ S IDFPWPVP++PM FYV GQEEI+ SGTSY+NRTEA+NVEKI T F+R G+ P QI
Sbjct: 61 QSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQI 120
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
GVITPYEGQRA++V +M GSL ++Y+EIEVASVD+FQGREKD II+SCVRSN+HQGI
Sbjct: 121 GVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGI 180
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL 944
GFLNDPRRLNVALTRA+YGI+++GNPKVLSKQPLWN+LL YKE + LVEGPLNNLK+S+
Sbjct: 181 GFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSM 240
Query: 945 ILFSKPKQYFK 955
+ F KPK+ +
Sbjct: 241 VQFQKPKKIYN 251
>gi|123478695|ref|XP_001322509.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121905356|gb|EAY10286.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 803
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 274/863 (31%), Positives = 410/863 (47%), Gaps = 113/863 (13%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C YCG + + C +FCNG+G SHI + L + TL + + E
Sbjct: 6 CAYCGCSEAECLAEVPECGLYFCNGKGVIPQSHITHFLKQTNLSSFTLPPENRFHQVKFE 65
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
CY C N+F LGF+ DS V + CR PC Q + + PLI++ L +
Sbjct: 66 CYVCHSTNVFQLGFVRFPHDSSVYITCRQPC--QFDAEIQREPTHTFHPLISNGQILPEI 123
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
V +P + ++ + +A +E+V N A ++E V L Y+ +
Sbjct: 124 VNIPPPDKYKKVS--VADALAVIEKV---NPAAIMPNIEAGLVLPAAK---LTYDSAEDF 175
Query: 282 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFG 341
I V E L++ + ++ W N KS+++ + A
Sbjct: 176 TGIMRKFVDAERSVSHELEKHRRFGDLHFEW---ANTKSVSFKARA-------------- 218
Query: 342 PLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYS 401
PL+KL ++ +V + VG +K +A M + + + +S
Sbjct: 219 PLLKLISN------------GTSVMFTVG-DKSEVAKV--------MEVTRQRTVHCIFS 257
Query: 402 YDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLAL 461
D+S G + + I+ + SF+R AL
Sbjct: 258 KDSSFYTKDFGITLTV------------------------------IYGAISFERQLKAL 287
Query: 462 RKFAVDDQSVSAYI-------------YHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 508
F D + I ++R+ G NV+ V LP S + P LN S
Sbjct: 288 DIFEKDKKCCHYIIRDAILGNIKNFKDHNRVKGQNVEMV-----LP---SGNDFPILNES 339
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
Q A K A+++ +LIQGPPGTGKT A IV VK +PVLV SNIA D T +I
Sbjct: 340 QQKATKTALKQRFTLIQGPPGTGKTTVIAAIVASFVKAGVTPVLVLTQSNIAADFATRRI 399
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR 628
+TG+ V+RV A ++E + + S K + + E L + ++
Sbjct: 400 SQTGVNVIRVLAFNKETNPNDDTNYETIPDFDIRPFTSHAKAVERYGEVFEGLCQSSDQN 459
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
R +N EK ++ V+C TC AG R+ +KF ++ DES Q +P+ ++ GA
Sbjct: 460 DRTQARNLEKDIIREYPVVCTTCGSAGGSRITSMKFPVVIFDESGQVLDPDIVIGATRGA 519
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
+Q+ILVGDH QLGPVV+ KKA ++ SL +RL L +RP L +QYRMHP +S FPS
Sbjct: 520 QQMILVGDHRQLGPVVLSKKAIKSRYDVSLMKRLTALNVRPSVLTMQYRMHPSISSFPSE 579
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FY +++G+ A +RK + PWP + P++F+ +EE S SYVN EA +
Sbjct: 580 AFYMKLVKDGLSASDRKWPRPILPWPDKESPVMFWNVDSREENYDSAISYVNVKEAEAIS 639
Query: 809 KITTRFIRCGMKP-EQIGVITPYEGQRAFLVQHMQYQGSLPA-------KIYQEIEVASV 860
+I R G+K + IG+ITPY GQ+ +L+ SLP+ I QEIE+ASV
Sbjct: 640 QIVDMMCRNGVKSGDDIGIITPYTGQQMYLMD------SLPSLCKYANDDIIQEIEIASV 693
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREK+ II SCVR+ND IGF+ D RRL V+LTRAKYG++++GN ++ +W
Sbjct: 694 DAFQGREKNFIIFSCVRANDMNDIGFMRDQRRLCVSLTRAKYGLVIVGNAATFARSSIWC 753
Query: 921 NLLNFYKEQKVLVEGPLNNLKES 943
L+ + + VEG L+ LK+S
Sbjct: 754 KLIQNLMNRGLFVEGELSALKKS 776
>gi|68070943|ref|XP_677385.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497484|emb|CAH99909.1| hypothetical protein PB000602.03.0 [Plasmodium berghei]
Length = 426
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/329 (56%), Positives = 236/329 (71%), Gaps = 28/329 (8%)
Query: 644 ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPV 703
ADVIC TCVGA D RL K +F+ +L+DE+ Q+TEPEC+VP++ GAKQ++LVGDHCQLGP+
Sbjct: 3 ADVICTTCVGAMDKRLKKFRFNQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPI 62
Query: 704 VMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
++CKKAA +GL +SLFERL++LGI PFRLEVQYRMHP LS+FPS FY+G LQNG+ E
Sbjct: 63 IVCKKAASSGLGKSLFERLMMLGITPFRLEVQYRMHPCLSEFPSYVFYDGCLQNGITLKE 122
Query: 764 RKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ 823
R+ +FPWP PM FY + G EE++ SGTSY+NR EA N+E + + G+K Q
Sbjct: 123 REYPLKNFPWPNSKYPMFFYNSNGLEEMSASGTSYLNRNEAQNMEILVRALLNSGLKATQ 182
Query: 824 IGVITPYEGQRAFLV----QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN 879
IGVITPYEGQRA++ +++ YQ L +IEVASVDAFQGREKD I++SCVRSN
Sbjct: 183 IGVITPYEGQRAYITSLFQKNISYQHCL------DIEVASVDAFQGREKDFILLSCVRSN 236
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ------------------PLWNN 921
GIGFLNDPRRLNVALTRAKYG+I+ GN KVLS+ +W N
Sbjct: 237 KKLGIGFLNDPRRLNVALTRAKYGLIICGNAKVLSRHHFISKEKINSNETITNVNSVWIN 296
Query: 922 LLNFYKEQKVLVEGPLNNLKESLILFSKP 950
LLN +K++ ++VEG L+NLK I P
Sbjct: 297 LLNQFKKKNLIVEGCLSNLKPITINIPTP 325
>gi|348689474|gb|EGZ29288.1| hypothetical protein PHYSODRAFT_475410 [Phytophthora sojae]
Length = 372
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/318 (57%), Positives = 224/318 (70%), Gaps = 16/318 (5%)
Query: 30 GSEFDFTDFTLPSQ-------SQTQASQLDSVNQIQVNG-------KQNLDNSNLNLVSQ 75
S + F D + PS+ Q QAS +Q V + LD+ +L
Sbjct: 43 ASPYAFVDPSEPSEQGADAFYDQYQASSTSFFDQSSVADDVASSTFQSQLDDGAGSLAG- 101
Query: 76 KLHELQFEEEED-DGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSH 134
L F+E D D ++ +ELPPHAC YCG+HDPA V+ C KWFCN RG+TSGSH
Sbjct: 102 DFQSLAFDEAADEDALDYTARELPPHACAYCGLHDPASVVKCVASDKWFCNSRGNTSGSH 161
Query: 135 IINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAA 194
II HLVR+K+KEV+LH + PLGETVLECY CG RN F+LGFIPAK DSVVVLLCR PC
Sbjct: 162 IIQHLVRSKNKEVSLHPESPLGETVLECYNCGCRNAFLLGFIPAKQDSVVVLLCRDPCLQ 221
Query: 195 QNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEA 254
N+LKDM+WD QW P+I DRSFL WLVKVP+E EQ R RQ+TS+QIAKLEE+W+DN A
Sbjct: 222 MNALKDMSWDMSQWLPIIEDRSFLPWLVKVPSEHEQLRARQITSSQIAKLEELWRDNPLA 281
Query: 255 TFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV 314
T +DL++PG+D++P +V Y+DGYQYQNIFGPLVK+E+DYDK++KESQTQE V VRWD
Sbjct: 282 TVEDLDRPGIDDEPIKVADTYDDGYQYQNIFGPLVKMESDYDKKMKESQTQEGVMVRWDT 341
Query: 315 GLNKKSIAYFSLAKTDGD 332
GLNKK A F+ ++ D D
Sbjct: 342 GLNKKRNAIFTCSRPDSD 359
>gi|301105110|ref|XP_002901639.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262100643|gb|EEY58695.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 414
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/384 (50%), Positives = 242/384 (63%), Gaps = 61/384 (15%)
Query: 62 KQNLDNSNLNLVSQKLHELQFEEEED-DGNEFFNKELPPHACKYCGIHDPAYVIMCNICK 120
+ LD+++L + L F+E D D ++ +ELP HAC YCG+HDPA V+ C +
Sbjct: 81 QSQLDDASL---AGDFQSLTFDETADEDALDYTARELPKHACAYCGLHDPASVVKCVATE 137
Query: 121 KWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKA 180
KWFCN RG+TSGSHII HLVR+K+KEV+LH + PLGET LECY CG RN F+LGFIPAK
Sbjct: 138 KWFCNSRGNTSGSHIIQHLVRSKNKEVSLHPESPLGETALECYNCGCRNAFLLGFIPAKQ 197
Query: 181 DSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQ 240
DSVVVLLCR PC N+LKDM+WD QW P+I DRSFL WLVKVP+E EQ R RQ+TS Q
Sbjct: 198 DSVVVLLCRDPCLQMNALKDMSWDMSQWLPIIDDRSFLPWLVKVPSEHEQLRARQITSTQ 257
Query: 241 IAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLK 300
IAKLEE+W+DN AT +DL++PG+D++P +V Y+DGYQYQNIFGPLVK+E+DYDK++K
Sbjct: 258 IAKLEELWRDNPLATVEDLDRPGIDDEPVKVAEMYDDGYQYQNIFGPLVKMESDYDKKMK 317
Query: 301 ESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQ 360
ESQTQE V VRWD GLNKK A F+ ++ D D
Sbjct: 318 ESQTQEGVMVRWDTGLNKKRNAIFTCSRPDSD---------------------------- 349
Query: 361 ENVTVRWDVGLNKKSIAYFSLAKTDGD-MRLMQGDELKLRYSYDASKTWSGLGHVIKIPD 419
L GD +RL G + Y K W G GHV+++ +
Sbjct: 350 --------------------LRLVPGDEIRLRLGATASMLY----GKDWEGTGHVLRLEE 385
Query: 420 NFGDEVGLELKSSAGAPTEATTGF 443
+ EV LE++SS P E T G+
Sbjct: 386 S---EVALEMRSS-NVPIEITDGY 405
>gi|300175280|emb|CBK20591.2| unnamed protein product [Blastocystis hominis]
Length = 861
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/496 (41%), Positives = 306/496 (61%), Gaps = 17/496 (3%)
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNV---DEVLFRCHLPKH--FSAPNLPDLNRSQVYA 512
+L K D++++S +IY+ LG+ + H + F APNL LNRSQ A
Sbjct: 375 RLTAIKLLDDEKAISQHIYNIFLGNKSMMNKREFYVSHRDREVSFDAPNLRPLNRSQHDA 434
Query: 513 VKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTG 572
+ +A+Q +LIQGPPGTGKT + +T PVLVC PSN+A D++ +IHRTG
Sbjct: 435 IAYALQSEFTLIQGPPGTGKTAYRNDPKHLWRFKTPGPVLVCTPSNVAADEICARIHRTG 494
Query: 573 LKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL--QLKEETGE-LSSADEKRY 629
+ VVR+ A S+E+++SPV L +H + R + M +E +LL Q + + GE + AD + +
Sbjct: 495 VNVVRLMAVSKESMESPVQELCVHIKAREL-MKAEASELLAIQTRHDDGEEIEEADWRHF 553
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
++ ++ +ADV+ TC AG P L F+S+L+DE+ QATE E ++P++ GA
Sbjct: 554 MKESGKYKRRVIQSADVVVSTCDSAGSPLLSGCVFNSVLVDEASQATECETLIPIVHGAH 613
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
+++LVGD QL PVV+ RAG SLFERL+ G+ P L VQYRMHP LS F ++
Sbjct: 614 RVVLVGDQKQLQPVVLSAVCKRAGYDVSLFERLIDSGMEPQLLCVQYRMHPALSVFSNHK 673
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEG L++G+ R L I F +P P+LF+ +G+E I +G+S++N EA+ V
Sbjct: 674 FYEGRLEDGIGEANRPL--IKFCYPNTKVPLLFWNVKGRESIGNTGSSFLNVQEATAVVN 731
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I ++CG+K ++IGVIT Y GQ+ L +Q Q L ++E ASV+ FQGRE D
Sbjct: 732 IVKELMQCGIKEKKIGVITSYTGQKVLLKNLLQ-QSRLG-----KVECASVNTFQGREMD 785
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
I++SCVRSN + IGFL DP+RLNVALTRA++G+I++G+ VL LW L++++
Sbjct: 786 YIVLSCVRSNPMRIIGFLKDPKRLNVALTRARFGMIIVGDTSVLKYNDLWKEYLSYHQAL 845
Query: 930 KVLVEGPLNNLKESLI 945
LV+G + + + S +
Sbjct: 846 NTLVDGSIGHWQVSAL 861
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 81 QFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLV 140
+ +++ D G E E C YC + ++ C ICK+WFCN GSHI H+
Sbjct: 4 KVKQDNDAGEEIV--EASTIQCDYCKNRTGSSLVFCRICKRWFCNSTDVRQGSHIFLHMS 61
Query: 141 RAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKD 200
+H + HK+ L + +C +CG NIF L + + V + C C ++N+L+D
Sbjct: 62 YTRHYQALSHKESVLKGSRFKC-SCGNSNIFDLYY--RMVNGAVKIRCLPSCLSKNALED 118
Query: 201 MNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQ-IAKLEEVWKDNAEATFQDL 259
+D + WKP++ DR + +P E + SAQ I++ E N +D+
Sbjct: 119 KAFDMDLWKPIVDDRRLTPAICTIPNVTEYC---SILSAQRISQYEHQRIANKSLRIEDV 175
Query: 260 EKPGVDEDPHQVL---LRYEDGYQYQNIFGPLVKLEADYDKR 298
V D QV Y+D Y +F PL+++E +YD+R
Sbjct: 176 ----VVNDYSQVRHTQQEYDDSLAYYKVFEPLIRIE-EYDQR 212
>gi|343415926|emb|CCD20512.1| hypothetical protein, conserved (fragment) [Trypanosoma vivax Y486]
Length = 794
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 187/441 (42%), Positives = 279/441 (63%), Gaps = 7/441 (1%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQ AVK A+ +LIQGPPGTGKT TS I+ QL+ + + VLVCAPSN AVD L
Sbjct: 346 LNESQQAAVKAALSNAFTLIQGPPGTGKTSTSVQIIRQLLLRKKTRVLVCAPSNAAVDHL 405
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN----MEMNSELKKLLQLKEETGE 620
+E +++ + +RV + RE DS + L +++R M +N + + +++ E+G
Sbjct: 406 SESMYKNKIDFIRVQPRYREENDSGRPY-TLGSRVREIMEAMPLNRKKRDIVKRALESGR 464
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
LS +++ + L+ A K +L V+ CTC+GAG L K +LIDE+ QATEPE
Sbjct: 465 LSEEEKQLCQKLEDRAVKKILAETRVVACTCIGAGSRWLRGFKADFVLIDEASQATEPET 524
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
+VP+ G KQ+ LVGDH QLGPVV+ A + G ++SLFERL G +L +QYR HP
Sbjct: 525 LVPLFRGEKQVALVGDHRQLGPVVLSNVAGKKGFARSLFERLAGAGSEITQLNLQYRTHP 584
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
+ +F S FY G++ +GV A++R S I FPWP P+KPMLFY G EE+ SG S++N
Sbjct: 585 FIYRFSSMAFYGGTVLDGVPAEKRDASGI-FPWPNPEKPMLFYDCSGVEEVGDSGASFLN 643
Query: 801 RTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
EA + + G ++P+++G+I+PY Q ++ + + G+ IY+++E+++
Sbjct: 644 EAEARATISVVDAVLESGAVRPDEVGIISPYRAQCEYMRERLLQWGTAGKDIYEKVEIST 703
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VDA+QGREK++II+SCVR+N+ + +GF+ D RRLNV+LTRA+ G+I IG + L W
Sbjct: 704 VDAYQGREKEIIILSCVRNNEERTVGFIGDERRLNVSLTRARRGLIAIGKAEALRGDKCW 763
Query: 920 NNLLNFYKEQKVLVEGPLNNL 940
+ LL + E + V GP+ +L
Sbjct: 764 SKLLLYMGEHSLAVTGPIRSL 784
Score = 86.7 bits (213), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 14/190 (7%)
Query: 101 ACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
+C YC + ++ C+ C KWFCNG +HI+ H + + H P+ L
Sbjct: 11 SCAYCAESNFETLLRCDTCDKWFCNGARAKGRAHILYHAAINRSHPFSTHPSCPITGMRL 70
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQE-QWKPLIADRSFLS 219
EC C N+F L F P + + +L+CR C SL D+ + W PL+ +
Sbjct: 71 ECAACESTNVFALRFFPGTSGARNLLICRY-CFDAGSLGDVPARRSADWLPLVRGNRVIE 129
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
+ + P+E +T I +LE W+ E T Q + + + + +
Sbjct: 130 SVCRFPSEPCS----DITENDINRLEAKWRGRPEETVQGALQ--------SIPVTFHNCK 177
Query: 280 QYQNIFGPLV 289
QY N+F +V
Sbjct: 178 QYSNVFREMV 187
>gi|154419279|ref|XP_001582656.1| possible regulator of nonsense transcripts [Trichomonas vaginalis
G3]
gi|121916893|gb|EAY21670.1| possible regulator of nonsense transcripts, putative [Trichomonas
vaginalis G3]
Length = 619
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 213/559 (38%), Positives = 305/559 (54%), Gaps = 41/559 (7%)
Query: 411 LGHVIKIPDNF-GDEV-----------GLELKSSAGAPT---EATTGFSVDFIWKSTSFD 455
LG +K+ N G+EV + ++ G P+ E ++ ++ S +D
Sbjct: 48 LGSTVKLIQNLDGNEVTETAKVVQRNKNMTIEIKFGIPSTFFETPNPLTIMNVFNSLVYD 107
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP-KHFSAPNLP-----DLNRSQ 509
R + AL F + + + +I +LG D R + H P LP LN SQ
Sbjct: 108 RQKAALAAFDTERKPMDNFIAECILGKP-DNFQVRNKIKDSHPVIPELPPAYFKKLNPSQ 166
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
A+K + +L+QGPPGTGKT T A + VK SPVLVCA SN+A D T ++
Sbjct: 167 ETAIKFILSHRFTLLQGPPGTGKTTTIAALALSFVKNGISPVLVCAQSNVATDFATLRVA 226
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY 629
+TG+KV RV + +RE + V N R M E KL K+E S
Sbjct: 227 QTGVKVARVLSSNREEVAGDVDRYTTKNLARTM-FGEEFTKLENDKDEASRKSIT----- 280
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
RM + ++ ++V+C TCV AG RL +IKF +++ DES Q +P+ ++P++ G +
Sbjct: 281 RM-----DSDVVRQSEVVCTTCVSAGGARLGRIKFQAVIFDESGQCLDPDLLIPLVHGTR 335
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q +LVGDH QLGPVV+ ++A +A L +RL++ GI P L QYRMHP LS FPS
Sbjct: 336 QCVLVGDHKQLGPVVVSRQAVKARYDIPLMQRLILNGIHPLVLRTQYRMHPGLSAFPSEA 395
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FY G LQ+GV A+ R WP P P++F+ +EE SG SYVNR E V
Sbjct: 396 FYSGMLQDGVTAEHRTWPNQFMKWPNPKLPLIFWNIPSKEEFYESGLSYVNRHEVGAVAV 455
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI-----YQEIEVASVDAFQ 864
+ G+K IGVITPY GQ+ ++++ + +L AKI + EIE+ASVDAFQ
Sbjct: 456 LLEAMYLGGVKASDIGVITPYAGQQIYMIETLP---ALCAKITDKSFFDEIEIASVDAFQ 512
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
GREK+ II+S VR+ND +GF+ D RL V+LTRA+YG+IV+G S+ +W +
Sbjct: 513 GREKNFIILSNVRANDQHDLGFVKDLHRLCVSLTRARYGLIVLGCADTFSENKVWCKYIK 572
Query: 925 FYKEQKVLVEGPLNNLKES 943
+E +V V+G +N+ K S
Sbjct: 573 HCQENRVFVDGSINDFKPS 591
>gi|389748586|gb|EIM89763.1| hypothetical protein STEHIDRAFT_118879 [Stereum hirsutum FP-91666
SS1]
Length = 388
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 174/208 (83%)
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEG+LQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++NRTEASNVEK
Sbjct: 2 FYEGTLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEASNVEK 61
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I T+F + G+ P QIGV+TPYEGQR+++V +MQY GSL +Y+EIEVASVDAFQGREKD
Sbjct: 62 IVTKFFKSGVVPGQIGVVTPYEGQRSYIVNYMQYNGSLKKDLYKEIEVASVDAFQGREKD 121
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW+ LL YKE+
Sbjct: 122 YIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHYLLTHYKEK 181
Query: 930 KVLVEGPLNNLKESLILFSKPKQYFKKN 957
LVEGPLNNL+ S+I FSKP++ K+
Sbjct: 182 GCLVEGPLNNLQPSMIQFSKPRRTLVKS 209
>gi|330843269|ref|XP_003293581.1| hypothetical protein DICPUDRAFT_84133 [Dictyostelium purpureum]
gi|325076068|gb|EGC29887.1| hypothetical protein DICPUDRAFT_84133 [Dictyostelium purpureum]
Length = 795
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/435 (37%), Positives = 247/435 (56%), Gaps = 65/435 (14%)
Query: 96 ELPPHACKYCGIHDPAYVIMC--NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDG 153
ELPPHAC YC H+ + V+ C C KWFCNG+G T SHII HLV++KHKE++LH +
Sbjct: 185 ELPPHACAYCSTHELSTVVKCCHPSCGKWFCNGKGRTKSSHIITHLVKSKHKEISLHPES 244
Query: 154 PLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLI- 212
G+T LEC+ CG +NIF+LGFI AK +SVVVLLCR PCA+ S K++NWD W+PLI
Sbjct: 245 SFGDTTLECFNCGCKNIFLLGFITAKTESVVVLLCRDPCASGPS-KEVNWDMSSWQPLIN 303
Query: 213 -ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQ 270
A+++F SWLVK P++ + +R RQ++ QI +LEE WK++ EAT +D+E P DE P
Sbjct: 304 GAEKAFCSWLVKTPSQHDVERSRQISIIQILRLEEFWKNDPEATLRDIEAPRSDDEKPAS 363
Query: 271 VLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
L Y+D Y+Y+ I PL++LEA ++K L+ES +Q N+ + W+ +NK+ A F +++D
Sbjct: 364 TQLAYKDAYEYKEIISPLIELEAKHEKELRESLSQSNIHIEWEQSINKRYTATFPFSRSD 423
Query: 331 GDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRL 390
+++ + G +KL+ + S + D
Sbjct: 424 ---LEFKVVPGDELKLQ------------------------------FISHSTGSAD--- 447
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG-FSVDFIW 449
W G VI+I +E L L++ ++ G + ++ +W
Sbjct: 448 -----------------WEDTGRVIRI----DNENMLSLETKTKCNIDSNKGSYRMEMVW 486
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN-VDEVLFRCHLPKHFSAPNLPDLNRS 508
+STS +R+ A++ FA+ ++++S+Y+YH LLGH + LP +F NLP LN S
Sbjct: 487 RSTSSERILSAMKSFAIKEEALSSYLYHALLGHQEIPPTKLEIELPTNFHIKNLPRLNES 546
Query: 509 QVYAVKHAIQRPLSL 523
Q AV + PL L
Sbjct: 547 QTNAVNKVLTSPLIL 561
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPK 951
RLN + T A ++ +P +LSK LWN+L++ +K + VLVEG L NLK S ++ KPK
Sbjct: 542 RLNESQTNAVNKVLT--SPLILSKDQLWNSLISHFKNKNVLVEGSLTNLKPSAVILQKPK 599
Query: 952 QYFKKNNM 959
+ + + M
Sbjct: 600 KLYGQGKM 607
>gi|294884797|gb|ADF47413.1| up-frameshift-1 nonsense mediated mRNA decay factor, partial
[Dugesia japonica]
Length = 258
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 160/257 (62%), Positives = 196/257 (76%), Gaps = 9/257 (3%)
Query: 6 YGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNL 65
Y +SQ LTFLDT E+DLIGG TQ ++ DF FT+PSQSQTQ SQLD + + +
Sbjct: 11 YNTNSQDLTFLDTGESDLIGGGTQDTDIDFNVFTVPSQSQTQTSQLDKSYEPEKH----- 65
Query: 66 DNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCN 125
+N+ L+ ++ L+FEEEE+ +E K LP +AC YCGIHDP+ V+MCN KKWFCN
Sbjct: 66 -ETNVELLETAINNLKFEEEEEQESEQ-PKTLPEYACAYCGIHDPSTVVMCNATKKWFCN 123
Query: 126 GRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVV 185
GRG+TSGSHII+HLVRAK KEVTLHKDGPL +TVLECY C +N+F LGF+PAKA+SVVV
Sbjct: 124 GRGNTSGSHIIHHLVRAKTKEVTLHKDGPLKDTVLECYVCASKNVFQLGFVPAKAESVVV 183
Query: 186 LLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLE 245
LLCR PCA QN KDM WD W+PLI DR FLSWLVKVP+++EQ R RQ+++ QI KLE
Sbjct: 184 LLCRHPCAQQN--KDMTWDPNSWQPLIIDRQFLSWLVKVPSDEEQCRARQMSAQQINKLE 241
Query: 246 EVWKDNAEATFQDLEKP 262
E+WK+N AT +DLEKP
Sbjct: 242 ELWKENPNATLEDLEKP 258
>gi|238600751|ref|XP_002395227.1| hypothetical protein MPER_04754 [Moniliophthora perniciosa FA553]
gi|215465596|gb|EEB96157.1| hypothetical protein MPER_04754 [Moniliophthora perniciosa FA553]
Length = 311
Score = 318 bits (816), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 176/211 (83%), Gaps = 1/211 (0%)
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS 805
PSN YEGSLQNGV A ER +DFPWPVPD PM FY GQEEI+ SGTS++NRTEAS
Sbjct: 1 PSNI-YEGSLQNGVTAPERLRKNVDFPWPVPDTPMFFYQNLGQEEISSSGTSFLNRTEAS 59
Query: 806 NVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
NVEKI T+F + G+ P QIGV+TPYEGQR+++V +MQ+ GSL +Y+E+EVASVDAFQG
Sbjct: 60 NVEKIVTKFFKSGVVPNQIGVVTPYEGQRSYIVNYMQFNGSLKKDLYKEVEVASVDAFQG 119
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
REKD II+SCVRSN+HQGIGFLNDPRRLNVALTRAKYG++++GNPKVLSK PLW++LL
Sbjct: 120 REKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWHDLLTH 179
Query: 926 YKEQKVLVEGPLNNLKESLILFSKPKQYFKK 956
YK ++ LVEGPL+NL+ S+I FSKPK+ K
Sbjct: 180 YKSKECLVEGPLSNLQVSMIQFSKPKRSLSK 210
>gi|146163349|ref|XP_001011272.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila]
gi|146146126|gb|EAR91027.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila SB210]
Length = 1186
Score = 313 bits (801), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 240/862 (27%), Positives = 422/862 (48%), Gaps = 117/862 (13%)
Query: 114 IMCNICKKWFCNGRG-HTSGSHIINHLVRAKHKEVTLH-KDGPLGETVLECYTCGVRNIF 171
+ C C F N R H S + I+ HL + H ++ + K + +C +C NIF
Sbjct: 385 VKCLQCNNIFQNQRNKHDSVTQIVKHLKKCSHNKIEIQEKARKTSFSTFKCLSCNQNNIF 444
Query: 172 VLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWK-----PLIADRSFLSWLVKVPT 226
VL FI + +S +LC C ++ D + + ++ + S + L+ +
Sbjct: 445 VL-FI-VEIESFYFVLC-NQCINSKMIQFQGKDSQSIEKCKKSAIVQNGSINTLLMNLTI 501
Query: 227 EQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFG 286
++++ ++ +DN + + G D +QV + + + QNI
Sbjct: 502 KKKEYYPVNNEHKNQPDQNQIEQDNNDDDYDFCLNGGND---NQVQVGMLNDPKTQNI-- 556
Query: 287 PLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKL 346
+ D+ +S+ +++ V +K I F + YQ+ F ++
Sbjct: 557 ------NNQDRNFDQSRNLQSIQVN---SREEKKIEIFKNVEA------YQHFFKKILNQ 601
Query: 347 EADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASK 406
E Y+ Q Q++V + L++ + + + L QG ELK+++ SK
Sbjct: 602 EQ-YEI---SKQIQQSVLTTKALILSENQLQ----IQVSSNHLLKQGKELKIKWGNFKSK 653
Query: 407 TWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG-----FSVDFIWKSTSFDRMQLAL 461
+ V I D+ ++ ++++ S + + G + I F+R+ +
Sbjct: 654 FY-----VESIDDH---KIVIKIQDSNKSLSRFKVGNVVENVQIKLINPKQIFERILQGI 705
Query: 462 RKFAVDDQSVSAYIYHRLLGH--------NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV 513
KF+ S+ + ++LG D+ L + + ++ LN+SQ+ A+
Sbjct: 706 NKFS----SLEESLQKKILGQFEKDDKSIKSDDSL---EIIDEQAQQDIAQLNQSQLQAI 758
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIV----YQLVK-QTGSPVLVCAPSNIAVDQLTEKI 568
+ ++ + +SLIQGPPGTGKT T+A +V Y++ K Q +LVCAPSN+A D ++++I
Sbjct: 759 QSSLSKNISLIQGPPGTGKTETAAQLVLEIWYKINKNQQNEKILVCAPSNLAADNISDRI 818
Query: 569 HRTG--LKVVRVCAKSREAIDSPVSF--LALHNQIRN---MEMNSELKKLLQLKEETGEL 621
H +KV+R+ +++R+ + F + LH ++ NS LK+
Sbjct: 819 HAQNREIKVIRIVSQARQRVKVSYQFQDIVLHKVLKKEGFFNKNSVLKR----------- 867
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
K L++NADVIC TC+ + D + I F +++IDE+ QA EPE +
Sbjct: 868 ---------------AKQLIENADVICTTCINSVDKFIKGISFSTVVIDEANQAIEPETI 912
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPE 741
+P+ AK+LIL+GDH QL P+++ +A++ GL +SLF RLV G+ P L +QYRMHPE
Sbjct: 913 IPLQHQAKKLILIGDHKQLPPIILSIQASKDGLKRSLFSRLVQAGLIPQFLSIQYRMHPE 972
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
+ K S+ FY+ L++GV +R + F W P+ FY QGQE G S++N
Sbjct: 973 IRKLASSIFYQNQLKDGVNEQDRTPTP-KFNWLNNKIPIQFYDVQGQEITLQDGKSFINE 1031
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
EA V+ + ++ I+ G+K IG+ITPY Q ++ Q ++ L Y
Sbjct: 1032 EEAKLVKSLVSQLIQAGVKDNDIGIITPYLSQSNYISQLIKNSNILIDTTY--------- 1082
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
+FQG+E+D II+SCVR N+ Q +G L P+ +NV++TRAK G++++GN K +S W
Sbjct: 1083 SFQGQERDYIIISCVRINNFQNLGILRTPQLINVSITRAKRGLLIVGNKKHVSYSRWWKQ 1142
Query: 922 LLNFYKEQKVLVE---GPLNNL 940
++++ + K++ E P+ N+
Sbjct: 1143 IIDYLDKLKLIQEIKKEPIENI 1164
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/444 (41%), Positives = 252/444 (56%), Gaps = 16/444 (3%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQ AV+ A++R L+LIQGPPGTGKT T+ ++ LV P+L A SN+AVD L
Sbjct: 214 LNPSQRAAVESALERRLTLIQGPPGTGKTHTAVHLLSALVNIGRGPILATAESNVAVDNL 273
Query: 565 TEKIHRTGLKVVRVC--AKSRE-----AIDSPVSFLALHNQIRNM-EMNSELKKLLQ-LK 615
E + G+K VR+ K RE +D+ + L ++R + E N EL++ L LK
Sbjct: 274 LEGLLELGVKAVRIGRPVKVREHLRQATLDAQIERHPLQEELRFVREQNDELRRSLSGLK 333
Query: 616 EETGELSSADEKR----YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDE 671
+ ++ D R R ++ N S+LD A+VIC T +G G L +F +L+DE
Sbjct: 334 GKEKGMAHKDVNRNFKEMRSIEANMIASVLDGAEVICATTIGVGHKLLRDRRFPVVLMDE 393
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
+ QA+EP +VP+ G +QL+LVGDH QL P V+ + A + GL QSLFERL G+
Sbjct: 394 ATQASEPSALVPITRGCRQLVLVGDHKQLPPTVISEAAQQGGLGQSLFERLTECGLDTHM 453
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEI 791
L QYRMHP + ++PS FYE L +G C + F WP D P+ F G E +
Sbjct: 454 LTTQYRMHPTIREYPSARFYEDRLDDG-CTPADRPPAAGFLWPDWDHPVAFVPIDGSEIV 512
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHM-QYQGSLPA 849
G+S N EA+ V I + G + P IGVITPY GQ LV Q G
Sbjct: 513 DEEGSSKSNLDEAAKVLSIVNGLLSAGDLTPADIGVITPYSGQVRLLVDLFEQAGGREEG 572
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
Y +E+ SVD +QGREK++I+ S VR+N+H IGFL D RRLNVA+TRA+ G+IV+GN
Sbjct: 573 APYAGLEIKSVDGYQGREKEIIVFSAVRANEHGEIGFLRDRRRLNVAITRARRGLIVLGN 632
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLV 933
K L W L++ +E+ +
Sbjct: 633 TKTLRHDGTWRAWLDWAEERNLFA 656
>gi|193785930|dbj|BAG54717.1| unnamed protein product [Homo sapiens]
Length = 373
Score = 305 bits (782), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 135/173 (78%), Positives = 162/173 (93%)
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
M FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ
Sbjct: 1 MFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQ 60
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTR
Sbjct: 61 YMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 120
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
A+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 121 ARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRK 173
>gi|67971434|dbj|BAE02059.1| unnamed protein product [Macaca fascicularis]
Length = 373
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 134/173 (77%), Positives = 162/173 (93%)
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
M FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ
Sbjct: 1 MFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQ 60
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
+MQ+ GSL K+YQE+++ASVDAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTR
Sbjct: 61 YMQFSGSLHTKLYQEVKIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTR 120
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
A+YG+I++GNPK LSKQPLWN+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 121 ARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRK 173
>gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]
Length = 712
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 252/449 (56%), Gaps = 37/449 (8%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
D N SQ A K+A++R L+LIQGPPGTGKT T A I+ LV+ +P+L A ++IA D
Sbjct: 264 DWNESQQTAWKNALERRLTLIQGPPGTGKTKTLAKILASLVQLGRTPILASAYTHIATDN 323
Query: 564 LTEKIHRTGLKVVRVCAKS-------REAIDSPVSFLALHNQIRNMEMNSELKKLLQ--L 614
+ +++ R + +R+ + + ++DS L R +E LKK ++
Sbjct: 324 ILDELERYNIPAIRIGKPANIHRNLWKYSLDS-----LLERDTRIIEKRENLKKAMERLA 378
Query: 615 KEETGELSSADEKRYR----MLKKN---AEKSLLDNADVICCTCVGAGDPRLLKIKFHSI 667
+ + G+ + Y LK+ A K +LD ++ TCVGAG+ L I F +
Sbjct: 379 QPKRGKAIGLAHRDYSKSLGQLKQTEMIATKEILDKYPIVLSTCVGAGEEILKNISFQVV 438
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
IDE+ Q+ EP ++P+I G +QLIL GDH QL P ++ +AA +GLS SLFERLV G+
Sbjct: 439 AIDEATQSHEPGLLIPIIKGCEQLILAGDHYQLPPTILNPEAAESGLSVSLFERLVRSGV 498
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG 787
P+ L QYRMHP ++ FPS +FY G L + C + +S FPWP P P+ F G
Sbjct: 499 EPYLLRTQYRMHPSIAAFPSQYFYHGLLHSAPCT--QSISNY-FPWPNPQTPIAFIPVLG 555
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ-----------IGVITPYEGQRAF 836
+E + GTSY N E+ V + ++ + M + IG+ITPY GQ
Sbjct: 556 EEWVTEQGTSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGIITPYAGQMRD 615
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
++ M + S Y +EV +VD FQGREKD+II+S VRSN Q +GFL D RRLNVA
Sbjct: 616 IMDRMDRETSTEWLSY--VEVKTVDGFQGREKDIIIISTVRSNPSQSLGFLQDWRRLNVA 673
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
+TR++ G+IVIGN LS+ W L +
Sbjct: 674 ITRSRSGLIVIGNANTLSRNDHWKRWLEW 702
>gi|159114110|ref|XP_001707280.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
gi|112735207|gb|ABI20695.1| UPF1 [Giardia intestinalis]
gi|157435384|gb|EDO79606.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
ATCC 50803]
Length = 1304
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 255/493 (51%), Gaps = 70/493 (14%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS--------------P 550
LN SQ +++ + RP++L+QGPPG GKT A + + K GS P
Sbjct: 801 LNFSQKDVIQYVLSRPITLVQGPPGCGKTFIGACLAWLFSKVYGSLDHDSGSFRQATPVP 860
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAI------------------------ 586
VL+C PSN A + LT + GL VVRV + +R+ +
Sbjct: 861 VLICCPSNTAAESLTLALEPFGLPVVRVVSLARQRLAEYEESPNTYADRVCLHVLFEEIL 920
Query: 587 ------DSPVSF-------LALHNQIRNMEMN--SELKKLLQLKEETG---ELSSADEKR 628
D+P F L N + + + +E+ LQ+K++ L + E+
Sbjct: 921 KLTLGDDAPSDFTPSKEARLIYENMLDEIPVKQFNEVYNYLQMKKKENIDVALKQSAEEE 980
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
E ++ +A V+ CTC + D L ++ F S+++DES QA EP+ + + G
Sbjct: 981 ISKAMFEIENIIISSAKVVVCTCSTSYDNHLSRVHFSSLIVDESTQAIEPDTLCAIGHGC 1040
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
++L+GDH QLGP+V A + L SL+ERL GI P L VQYRMHP LS FPSN
Sbjct: 1041 SHIVLMGDHKQLGPIVATNIARHSKLDLSLYERLQRAGIEPHSLTVQYRMHPALSAFPSN 1100
Query: 749 FFYEGSLQNGVCADERK-----LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
FY G LQNGV +R+ LS FPWP+P P F+ QG EI G GTS N TE
Sbjct: 1101 TFYNGMLQNGVTQADRQLIPKPLSIDSFPWPIPSTPSFFWHVQGTHEI-GHGTSLRNDTE 1159
Query: 804 ASNVEKITTRFIRC-GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
VE I + ++C +K IG++TPY+ Q+ + ++ G Y E+ V SVDA
Sbjct: 1160 ILCVEAIVDQLLKCYELKQSDIGIVTPYDYQKCQIEMQLKDAG------YSEVFVNSVDA 1213
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQG EK++II S VRS D + IGFL D RRLNV LTR + +I++GN L+ W +L
Sbjct: 1214 FQGHEKEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRCRCALIIVGNATALAIDSTWRSL 1272
Query: 923 LNFYKEQKVLVEG 935
+ Y KVLV G
Sbjct: 1273 IQHYYNNKVLVMG 1285
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 10/200 (5%)
Query: 102 CKYCG-IHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
C CG + +P ++ C C++ +CN H + SHI+ HL H + + + VL
Sbjct: 4 CALCGSLAEP--LVRCGACREVYCNNFDHKT-SHIVRHLQLTGHDHIEPVSEFYIPSDVL 60
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
C C + I LGF+P KAD+ ++C C D D W+P+I+ +
Sbjct: 61 YCNDCETKGITSLGFLPTKADACSGIIC---CVNCRMYHDQTHDTSAWRPIISTHIDSRF 117
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWK--DNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
+ Q V +E + + E T +D P V + + LL D
Sbjct: 118 FPGHEEAENQGDEPNVGDCTFTGVESYYTPLPSTEMTSKDSIVPSVHDILNDDLLFTMDT 177
Query: 279 YQYQNIFGPLVKLEADYDKR 298
Y+ N+F L +EA +R
Sbjct: 178 YR-SNLFSSLSPMEAQPHER 196
>gi|303283432|ref|XP_003061007.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
gi|226457358|gb|EEH54657.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
Length = 1099
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 251/458 (54%), Gaps = 55/458 (12%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
P LN SQ A++ A+ L+L+QGPPGTGKT TS IV L+ PVL + SN
Sbjct: 557 PIAKSLNESQRNALRSALTNRLTLVQGPPGTGKTYTSVAIVKGLLAMNRGPVLCTSDSNT 616
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLL---QLKE 616
AVD L + + ++VVRV R+ + EL K + +
Sbjct: 617 AVDNLVQGMADARMRVVRVG--------------------RSEAVRPELLKYVLERMFND 656
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
TG S ++R L ADV+CCTC GAG L K F ++L+DE+ Q T
Sbjct: 657 RTGPERSLAQQRA-----------LRQADVVCCTCSGAGSDMLEKFNFSAVLLDEASQVT 705
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQY 736
EP +VP+ G QL+LVGDH QL P V C+ A AGLS SLF+RL +G++P L+VQ+
Sbjct: 706 EPSSLVPLSKGCHQLVLVGDHKQLPPTVTCRDAGNAGLSTSLFDRLANMGVKPKLLDVQF 765
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY---------VTQG 787
RMHP LS+FPS+ FY+G +++G A +R + F WP P+ F G
Sbjct: 766 RMHPALSRFPSDAFYDGRVKSGTLARDRP-APSGFAWPNAGVPIAFVPVGVPGVSGAYGG 824
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCG---MKPEQIGVITPYEGQRAFLVQHMQYQ 844
E G+G S+VN+ EA V + +R +R G ++P +GV+TPY Q + + ++ +
Sbjct: 825 HERREGNG-SFVNQREADVVVDVLSRLLRAGGGELEPRDVGVVTPYAAQVRHIRRQLRNR 883
Query: 845 GSLPAKIYQE-----IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
G + I +E +EV+SVD +QGREK+++++S VRSND +GF++D RR NV LTR
Sbjct: 884 G-IQTGIDRETGKPGVEVSSVDGYQGREKEVMVVSTVRSNDRGTMGFVSDARRCNVTLTR 942
Query: 900 AKYGIIVIGNPKVL-SKQPLWNNLLNFYKEQKVLVEGP 936
AK G++V G+P L S W L + +++ P
Sbjct: 943 AKRGVVVCGDPNTLASDHVTWGRWLRWAAAGGLVIGAP 980
>gi|308161426|gb|EFO63875.1| Regulator of nonsense transcripts 1-like protein [Giardia lamblia
P15]
Length = 1303
Score = 298 bits (763), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 255/493 (51%), Gaps = 70/493 (14%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS--------------P 550
LN SQ +++ + RP++L+QGPPG GKT A + + K GS P
Sbjct: 800 LNFSQKDVIQYVLSRPITLVQGPPGCGKTFIGACLAWLFSKVYGSSDHDSGSFRQTALVP 859
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAI------------------------ 586
VL+C PSN A + LT + GL VVRV + +R+ +
Sbjct: 860 VLICCPSNTAAESLTLALEPFGLPVVRVVSLARQRLAEYEESPNTYADRVCLHVLFEEVL 919
Query: 587 ------DSPVSF-------LALHNQIRNMEMN--SELKKLLQLKEETG---ELSSADEKR 628
D+P F L N + + + +E+ LQ+K++ L + E+
Sbjct: 920 KLALGDDAPSDFTPSKEARLIYENMLDEIPIKQFNEVYNYLQMKKKENIDVALKQSAEEE 979
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
E ++ +A V+ CTC + D L ++ F S+++DES QA EP+ + + G
Sbjct: 980 ISKAMFEIENIIISSAKVVICTCSTSYDNHLSRVHFSSLIVDESTQAIEPDTLCAIGHGC 1039
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
++L+GDH QLGP+V A + L SL+ERL GI P L VQYRMHP LS FPSN
Sbjct: 1040 SHIVLMGDHKQLGPIVATNIARHSKLDLSLYERLQRAGIEPHSLTVQYRMHPALSAFPSN 1099
Query: 749 FFYEGSLQNGVCADERK-----LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
FY G LQNGV +R+ LS FPWP+P P F+ QG EI G GTS N TE
Sbjct: 1100 TFYNGMLQNGVTQADRQLVPKPLSTESFPWPMPSTPSFFWHVQGTHEI-GHGTSLRNDTE 1158
Query: 804 ASNVEKITTRFIRC-GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
VE I + ++C +K IG++TPY+ Q+ + ++ G Y E+ V SVDA
Sbjct: 1159 ILCVEAIVDQLLKCYELKQGDIGIVTPYDYQKCQIEMQLKDAG------YSEVFVNSVDA 1212
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQG EK++II S VRS D + IGFL D RRLNV LTR + +I++GN L+ W +L
Sbjct: 1213 FQGHEKEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRCRCALIIVGNATALAIDDTWRSL 1271
Query: 923 LNFYKEQKVLVEG 935
+ Y KVLV G
Sbjct: 1272 IQHYYNNKVLVVG 1284
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 10/200 (5%)
Query: 102 CKYCG-IHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
C CG + +P ++ C C++ +CN H + SHI+ HL H + + + VL
Sbjct: 4 CALCGSLAEP--LVRCGACREVYCNHFDHKT-SHIVRHLQLTGHDHIEPVSEFYIPSDVL 60
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSW 220
C C + I LGF+P KAD+ ++C C D D W+P+I+ +
Sbjct: 61 YCNDCETKGITSLGFLPTKADACSGIIC---CVNCRMYHDQTHDTSAWRPIISTHIDSRF 117
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWK--DNAEATFQDLEKPGVDEDPHQVLLRYEDG 278
+ Q V +E + + E T +D P V + + LL D
Sbjct: 118 FPGHEEAENQGDEPNVGDCTFTGVESYYTPLPSTEMTSKDNIVPSVHDILNDDLLFTMDT 177
Query: 279 YQYQNIFGPLVKLEADYDKR 298
Y+ N+F L +EA +R
Sbjct: 178 YR-SNLFSSLSLMEAQPHER 196
>gi|253741410|gb|EES98280.1| Regulator of nonsense transcripts 1-like protein [Giardia
intestinalis ATCC 50581]
Length = 1309
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 254/497 (51%), Gaps = 74/497 (14%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-------------PV 551
LN SQ +++ + RP++L+QGPPG GKT A + + K GS PV
Sbjct: 802 LNFSQRDVIQYVLSRPITLVQGPPGCGKTFIGACLAWIFSKVYGSDNSSSSPRNTTSVPV 861
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALH---NQIRN 601
L+C PSN A + LT + GL VVRV + +R E D+ + LH +I
Sbjct: 862 LICCPSNTAAESLTLALEPFGLPVVRVVSLARQRLAEYEEPADTYADRVCLHVLFEEILK 921
Query: 602 MEM--------------NSELKKLL--QLKEETGELSSADEKRYRMLKKN---------- 635
+ + S+ +L+ + +E + S D Y +KK
Sbjct: 922 LTLLNDNPQSPYLSDFTPSKEARLIYENMTDEIPDKQSNDVYNYLQMKKKDNIDVALKQS 981
Query: 636 -----------AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPV 684
E ++ +A V+ CTC + D L ++ F S+++DES QA EP+ + +
Sbjct: 982 AEEEISKAMFEIENLIISSAQVVICTCSTSYDNHLSRVHFSSLIVDESTQAIEPDTICAI 1041
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
G ++L+GDH QLGP+V A + L SL+ERL GI P L VQYRMHP LS
Sbjct: 1042 GHGCSHIVLMGDHKQLGPIVATNIARLSKLDLSLYERLQQAGIEPHSLTVQYRMHPALSA 1101
Query: 745 FPSNFFYEGSLQNGVCADERKL-----SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
FPSN FY G LQNGV +R+L S FPWPVP P F+ QG E+ G GTS
Sbjct: 1102 FPSNTFYNGMLQNGVTQMDRQLIPKAMSTESFPWPVPSIPSFFWHVQGTHEV-GHGTSLR 1160
Query: 800 NRTEASNVEKITTRFIRC-GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVA 858
N TE VE I ++C +K IG++TPY+ Q+ + ++ G Y E+ V
Sbjct: 1161 NDTEILCVEAIVDHLLKCYELKQGDIGIVTPYDYQKCQIEMQLKDAG------YSEVFVN 1214
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
SVDAFQG EK++II S VRS D + IGFL D RRLNV LTR + +I++GN L+
Sbjct: 1215 SVDAFQGHEKEVIIFSTVRSVD-KHIGFLKDQRRLNVGLTRCRCALIIVGNATALAIDDT 1273
Query: 919 WNNLLNFYKEQKVLVEG 935
W L+ Y KVLV G
Sbjct: 1274 WRALIQHYYNTKVLVAG 1290
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 102 CKYCGIHDPAY-VIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVL 160
C CG PA ++ C +C++ +CN H + SHI+ HL H + + + L
Sbjct: 4 CALCG--SPAEPLVRCGVCREIYCNNFDHKT-SHIVRHLQLTGHDHIEPISEFYIPSDAL 60
Query: 161 ECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIA 213
C C + I LGF+P KAD+ ++C C + D W+P+I+
Sbjct: 61 YCNDCETKGITSLGFLPTKADACSGMIC---CVNCRMYHEQTHDTSAWRPIIS 110
>gi|412986744|emb|CCO15170.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 974
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 169/417 (40%), Positives = 242/417 (58%), Gaps = 36/417 (8%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LN SQ AV ++R LSLIQGPPGTGKT TS IV L+ PVL + SN AVD
Sbjct: 538 NLNESQQRAVSATLERRLSLIQGPPGTGKTHTSVAIVRGLIDIGRGPVLCTSDSNTAVDN 597
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L E + R G++VVR+ EA+ LA++ QI NM K
Sbjct: 598 LVEGLARAGVRVVRI--GRTEAVRQD---LAMY-QIENMVPPGCTKH------------E 639
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
A E + R ++ A +CCTC G+G L +I F ++++DE+ Q TEP +VP
Sbjct: 640 AYEAQIRAVRY---------AQAVCCTCAGSGSDFLDRISFSAVMLDEASQVTEPMSLVP 690
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+ G +QL+LVGDH QL P ++ ++A GL+ S+F+RLV LG+ P+ L+ Q+RMHP L
Sbjct: 691 ISRGCQQLVLVGDHKQLPPTILSREAELGGLTLSMFDRLVSLGVVPYMLDTQFRMHPALG 750
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGT-SYVNRT 802
KFPS+ FY+ L+NG R + I F WP P+ P+ + T + + + SY NR
Sbjct: 751 KFPSDAFYDKQLKNGTPRAMRP-TPIGFNWPQPNVPICYIPTHPTNAMENNDSNSYSNRA 809
Query: 803 EASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE-----IE 856
EA V F+ ++P+ IG++TPY Q L Q ++ G + + + IE
Sbjct: 810 EAELVLAYLRGFLSAQELRPKDIGIVTPYAAQVRLLRQMIRRAG-IQTGVDRNTGECGIE 868
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
V+SVD FQGREK+L+I+S VR+N ++ +GF++DPRR NV LTRA+ G++VIG+ L
Sbjct: 869 VSSVDGFQGREKELMIVSTVRANTNRSLGFVSDPRRCNVTLTRARRGLVVIGHENTL 925
>gi|440789574|gb|ELR10880.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1656
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 171/464 (36%), Positives = 254/464 (54%), Gaps = 33/464 (7%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK--QT 547
R + PK+F A L N SQ + + R L+L+QGPPGTGKT + ++ LV +
Sbjct: 317 RKNFPKNFDAWKL---NESQRKVITTILTRKLTLVQGPPGTGKTTLAIHLMKLLVHLCRG 373
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC--AKSREAIDSPVSFLALHNQIRNMEMN 605
+P+L A +N+AVD L E + +G++ VRV K RE + +S AL M+ +
Sbjct: 374 HAPILCTADTNVAVDNLLEGLADSGVRAVRVGRPVKIREELRD-LSLEAL------MQEH 426
Query: 606 SELKKLLQLKEETGELS-------SADEKR--------YRMLKKNAEKSLLDNADVICCT 650
+ KL L++E LS A KR R L+ +L ADVIC T
Sbjct: 427 AANNKLDALRQELAGLSHGKTPEERAAAKREGVTLHQNIRRLEDYIHNDVLGKADVICAT 486
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
C+GAG L F +++DES QATEP + ++ ++ ++L+GDH QL P V +A
Sbjct: 487 CIGAGHDLLASRAFPIVILDESTQATEPASLCALVHNSQHVVLLGDHYQLPPTVTSPEAQ 546
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
+ GLS+SLF R++ +GI P+ LE+QYRMHP +S+FPS FY G +++G+ A +R S
Sbjct: 547 QGGLSESLFARMIAMGIEPYMLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRP-SPTG 605
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQIGVIT 828
WP P+ F G E+ + G S+ N E V ++ + F + + IGVIT
Sbjct: 606 IAWPSEGNPIAFVNVDGYEKQSTDGYSWFNSAEGEAVFQLVSAFDQRSDVGDVKDIGVIT 665
Query: 829 PYEGQRAFLVQHMQYQGSL-PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
PY GQ L +G + + + ++ + SVD +QGREK++II + VRSN +GFL
Sbjct: 666 PYNGQVKHLADLFSRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFL 725
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
D RRLNVALTRA+ G++V+GN + L W L + ++
Sbjct: 726 RDWRRLNVALTRARRGLLVVGNRRTLQSDEHWGKWLRWIDTHRL 769
>gi|294946571|ref|XP_002785118.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239898560|gb|EER16914.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 412
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 173/246 (70%), Gaps = 7/246 (2%)
Query: 86 EDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHK 145
E DG F LP H+C+YC + P V+ CN+CK+WFCN +TSGSHI+NHLVR+KHK
Sbjct: 140 ESDG--FDPSTLPDHSCQYCYLSSPECVVQCNVCKRWFCNSHHNTSGSHIMNHLVRSKHK 197
Query: 146 EVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQ 205
V LH+D PLG ++LECY CG N+FVLGFIP+K DSVVVL+CR PC N+LKD WD
Sbjct: 198 SVCLHEDSPLGASLLECYVCGNTNVFVLGFIPSKTDSVVVLICREPCLGSNTLKDDEWDI 257
Query: 206 EQWKPLIADRSFLSWLVKVPT-EQEQQRGRQVTSAQIAKLEEVWKDNAE-ATFQDLEKPG 263
W+PLI +R+FL WLVK+PT E+E + R +T++QI +LEE+W++ E AT DL KPG
Sbjct: 258 SMWQPLIEERAFLPWLVKIPTPEEEVKYTRPITNSQINRLEELWREGKESATVVDLAKPG 317
Query: 264 V---DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKS 320
+E+ V Y D Y YQN FGPLV++EA YDK +KESQ + ++ +RWD+ + +
Sbjct: 318 TAAAEEELPVVRNTYPDAYVYQNTFGPLVEMEAVYDKEVKESQAKHDIKLRWDLNMGNRR 377
Query: 321 IAYFSL 326
AYF +
Sbjct: 378 CAYFPV 383
>gi|308810357|ref|XP_003082487.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116060956|emb|CAL56344.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 1079
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 164/417 (39%), Positives = 239/417 (57%), Gaps = 35/417 (8%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQ A+K A++R L+LIQGPPGTGKT TS IV +++ PVL + SN AVD +
Sbjct: 632 LNASQRDAMKAALERRLTLIQGPPGTGKTHTSVAIVRGMLEIGHGPVLCTSDSNTAVDNM 691
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSA 624
E + + G+ V+R+ EA+ ++ + N I E A
Sbjct: 692 VEGLAKAGVNVIRL--GRPEAVRPDLARYQIENAIPPGATKHE----------------A 733
Query: 625 DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPV 684
E + R ++ A IC TC GAG L +I F ++++DE+ Q TEP +VP+
Sbjct: 734 YEAQLRAVRY---------AQAICATCSGAGSDFLDRINFSAVMLDEASQVTEPMSLVPL 784
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
G +QL+LVGDH QL P V+ ++A AG++ SLF+RL G++P+ L+ Q+RMHP +S
Sbjct: 785 ANGCQQLVLVGDHKQLPPTVVSREAELAGMTLSLFDRLTRAGVKPYLLDTQFRMHPAISH 844
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEA 804
FPS+ FY G +++G A +R K F WP+P P+ F T + SY NR EA
Sbjct: 845 FPSHSFYNGLVKSGTPAKDRPAPK-GFQWPIPSVPIAFCPTPENSKETNDNLSYSNRVEA 903
Query: 805 SNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE-----IEVA 858
V +I + G ++P +G++TPY Q L++ M Q + + ++ IEV+
Sbjct: 904 ERVLEILLGVLSAGELRPCHVGIVTPYAAQ-VKLIRSMLRQRGVRTGVDRDTGEAGIEVS 962
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
SVD +QGREK+L+I+S VR+ND IGF+ D RR NV LTRA+ G+IV+G+ LSK
Sbjct: 963 SVDGYQGREKELMIVSTVRANDLNTIGFVADARRCNVTLTRARRGVIVVGHASTLSK 1019
>gi|440794946|gb|ELR16091.1| hypothetical protein ACA1_224920 [Acanthamoeba castellanii str.
Neff]
Length = 1615
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 171/464 (36%), Positives = 254/464 (54%), Gaps = 33/464 (7%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK--QT 547
R + PK+F A L N SQ + + R L+L+QGPPGTGKT + ++ LV +
Sbjct: 316 RKNFPKNFDAWKL---NESQRKVITTILTRKLTLVQGPPGTGKTTLAIHLMKLLVHLCRG 372
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC--AKSREAIDSPVSFLALHNQIRNMEMN 605
+P+L A +N+AVD L E + +G++ VRV K RE + +S AL M+ +
Sbjct: 373 HAPILCTADTNVAVDNLLEGLADSGVRAVRVGRPVKIREELRD-LSLEAL------MQEH 425
Query: 606 SELKKLLQLKEETGELS-------SADEKR--------YRMLKKNAEKSLLDNADVICCT 650
+ KL L++E LS A KR R L+ +L ADVIC T
Sbjct: 426 AANNKLDALRQELAGLSHGKTPEERAAAKREGVTLHQNIRRLEDYIHNDVLGKADVICAT 485
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
C+GAG L F +++DES QATEP + ++ ++ ++L+GDH QL P V +A
Sbjct: 486 CIGAGHDLLASRAFPIVILDESTQATEPASLCALVHNSQHVVLLGDHYQLPPTVTSPEAQ 545
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
+ GLS+SLF R++ +GI P+ LE+QYRMHP +S+FPS FY G +++G+ A +R S
Sbjct: 546 QGGLSESLFARMIAMGIEPYMLEIQYRMHPIISEFPSVHFYGGKIKDGIVAAQRP-SPTG 604
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQIGVIT 828
WP P+ F G E+ + G S+ N E V ++ + F + + IGVIT
Sbjct: 605 IAWPSEGNPIAFVNVDGYEKQSTDGYSWFNSAEGEAVFQLVSAFDQRSDVGDVKDIGVIT 664
Query: 829 PYEGQRAFLVQHMQYQGSL-PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
PY GQ L +G + + + ++ + SVD +QGREK++II + VRSN +GFL
Sbjct: 665 PYNGQVKHLADLFSRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRSNSRGDVGFL 724
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
D RRLNVALTRA+ G++V+GN + L W L + ++
Sbjct: 725 RDWRRLNVALTRARRGLLVVGNRRTLQSDEHWGKWLRWIDTHRL 768
>gi|123448689|ref|XP_001313071.1| possible regulator of nonsense transcripts [Trichomonas vaginalis
G3]
gi|121894941|gb|EAY00142.1| possible regulator of nonsense transcripts, putative [Trichomonas
vaginalis G3]
Length = 814
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 249/445 (55%), Gaps = 17/445 (3%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+LNRSQ AV+ A+ + + IQGPPGTGKT + IV V PVL+ SN+ D
Sbjct: 345 ELNRSQGKAVEAALSQRFTYIQGPPGTGKTTSITAIVKSFVDGGIFPVLIVGHSNVTADF 404
Query: 564 LTEKIHRTGLKVVRVC---------AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQL 614
+ GLKV RV A IDS +F+ + + KK Q
Sbjct: 405 GCLALSNIGLKVGRVLSLEIEDAIQAAKLNEIDSEYNFIIPGYERSKFSTFQKAKK--QY 462
Query: 615 KEETG-ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESM 673
E+ G E A K YR KK E+ ++ + VIC T +G R+ + F +I+ DE+
Sbjct: 463 IEKYGTEPDLASSKSYRKFKK-IEQRIIADCQVICVTSSTSGSVRV-EGNFRAIIFDEAG 520
Query: 674 QATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE 733
Q +P+ ++ + ++L+LVGD QLGP + AG +L ++LV LG+ P L
Sbjct: 521 QCLDPDFLISMKHNPERLVLVGDTFQLGPTIQNNAVRNAGFGVNLMKKLVKLGLIPNILT 580
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADER--KLSKIDFPWPVPDKPMLFYVTQGQEEI 791
QYRMHP + +FPS FY+ +++G+ A++R K SK +F +P P P++F+ +G+E+
Sbjct: 581 YQYRMHPSILEFPSKTFYKNLVKSGISAEQRIYKFSKPNFKFPNPQIPLMFWDVEGKEQS 640
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG-SLPAK 850
G G SY ++ + V ++ G+ IG+ITPY GQ +L+ ++ Y S A+
Sbjct: 641 DGDGKSYWCLSQCNAVSQVLDALFNSGVPANSIGIITPYNGQNDYLMDNLDYICESCSAE 700
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
+ +E+A+VD FQGREKD II + VRSN++ IGFL+D RLNV++TRAKYG+IVIG+
Sbjct: 701 YIKNVEIATVDGFQGREKDFIIFNLVRSNENYQIGFLSDIERLNVSITRAKYGLIVIGHS 760
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEG 935
+ SK L+ + NF+ E + G
Sbjct: 761 RTFSKTKLFCDWFNFFIENNCFMAG 785
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 23/224 (10%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C +CG + + W CN + + SH++ L ++ KE+ LH P +
Sbjct: 6 CVFCGCKEITSLAKPKDYNFWLCNAKKGLTASHLVQFLKKSDCKEIELHPGNPFHGIEFK 65
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
C CG NIF LG + + + ++V C + C K Q+ P+I++ +
Sbjct: 66 CAVCGQTNIFDLGILITQTNQIIV--CSSQCQHDAQFKGKTI---QFIPIISNSCVEEQI 120
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
+ P + S +I +L V D K + E +Q YE +Y
Sbjct: 121 LPFPENCPNEVTPASVSDKIRQLTGV-------GVVDANKQKLPEGKYQ----YESVEEY 169
Query: 282 QNIFGPLVKLE--ADYDKRLKESQTQENVTVRWDVGLNKKSIAY 323
F ++ E ADY + S + N ++W+ NK+ ++
Sbjct: 170 TTTFNAFIQAEMKADYFRAHNTSTSISN--IKWE---NKRKFSF 208
>gi|114794857|pdb|2IYK|A Chain A, Crystal Structure Of The Upf2-Interacting Domain Of
Nonsense Mediated Mrna Decay Factor Upf1
gi|114794858|pdb|2IYK|B Chain B, Crystal Structure Of The Upf2-Interacting Domain Of
Nonsense Mediated Mrna Decay Factor Upf1
Length = 162
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 123/157 (78%), Positives = 139/157 (88%)
Query: 95 KELPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
K+LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGP
Sbjct: 6 KDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGP 65
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIAD 214
LGETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI D
Sbjct: 66 LGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQD 125
Query: 215 RSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDN 251
R FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N
Sbjct: 126 RCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKEN 162
>gi|255082057|ref|XP_002508247.1| predicted protein [Micromonas sp. RCC299]
gi|226523523|gb|ACO69505.1| predicted protein [Micromonas sp. RCC299]
Length = 1188
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 244/440 (55%), Gaps = 38/440 (8%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
+N+SQ A++ A+ + ++LIQGPPGTGKT T+ +V ++ SP+L + SNIAVD L
Sbjct: 653 MNKSQTDALEAALFQRVTLIQGPPGTGKTHTAVALVQMWLRNRTSPILCTSDSNIAVDNL 712
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSA 624
+ + R G++V R+ EA+ + + + I +E S + K
Sbjct: 713 VDGLSRAGVRVARIGRP--EAVRQDLMQFMVES-IAGIEPGSNMSK-------------- 755
Query: 625 DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPV 684
+++Y+ + +L A+V+C TC GAG L + F + LIDE+ QATEP +VP+
Sbjct: 756 -DQQYQAIN-----GVLRRAEVVCATCAGAGSDILERFSFQACLIDEATQATEPATVVPL 809
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
G Q++L+GD QL P ++ ++A AGL SLFER++ GIR F L+VQYRMHP ++
Sbjct: 810 TKGCSQVVLIGDQKQLPPTIISREADAAGLGTSLFERMLARGIRAFMLKVQYRMHPAIAA 869
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTE 803
+PS FY G+L +G R+ + + F WPVP P+ F V G E G+S N E
Sbjct: 870 YPSKAFYSGALLSGTPPSARR-APMGFDWPVPAVPLAFVDVPDGYER--SDGSSQTNPVE 926
Query: 804 ASNVEKITTRFIRC-GMKPEQIGVITPYEGQRAFLVQHM---------QYQGSLPAKIYQ 853
A V I + + +IG++TPY Q + + + ++ Q
Sbjct: 927 AQKVVNIVKKLAAGHDVIFGEIGIVTPYSAQVRAIKRLLNGNKPEVRSRFDAPADPNTLQ 986
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+EV SVD FQGREK++I+ C R+N + +GFL DPRR+NV LTRA+ G+I+IGN L
Sbjct: 987 ALEVCSVDGFQGREKEVIVFCCTRANPNGNVGFLADPRRVNVMLTRARRGLIIIGNLGTL 1046
Query: 914 SKQP-LWNNLLNFYKEQKVL 932
+ P +W L + + ++
Sbjct: 1047 RRDPEVWGPWLQWAGDNGLI 1066
>gi|344230553|gb|EGV62438.1| hypothetical protein CANTEDRAFT_115904 [Candida tenuis ATCC 10573]
Length = 305
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 166/220 (75%), Gaps = 2/220 (0%)
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY 783
+LG P RLEVQYRM+P LS+FPSN FYEGSLQ+GV ++R + FPWPV D P +F+
Sbjct: 1 MLGHVPLRLEVQYRMNPALSEFPSNMFYEGSLQDGVTVEDRLIKNSTFPWPVQDIPSMFW 60
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQY 843
G+EEI+GSG+S++NR EA VEK+ R G+K +QIG+ITPYEGQ++F+ +++
Sbjct: 61 ANYGKEEISGSGSSFLNRVEAMRVEKVVNRLFEDGVKGDQIGIITPYEGQQSFVTRYLAT 120
Query: 844 QGSLP--AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
+ Y IEVASVDAFQGREKD II+SCVR+N+ Q IGFL DPRRLNVALTRAK
Sbjct: 121 NATQTQYKDEYLSIEVASVDAFQGREKDFIILSCVRANEAQVIGFLRDPRRLNVALTRAK 180
Query: 902 YGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLK 941
YG+IV+GNP+ LS+ PLWN+LL Y+E+ LVEG L NL+
Sbjct: 181 YGMIVLGNPRTLSRNPLWNHLLVHYRERGCLVEGLLENLQ 220
>gi|429964317|gb|ELA46315.1| hypothetical protein VCUG_02203 [Vavraia culicis 'floridensis']
Length = 849
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 159/360 (44%), Positives = 216/360 (60%), Gaps = 31/360 (8%)
Query: 596 HNQIRNMEMNSE-LKKLLQL-----KEETGELSSADEKRYRMLKKNAEKSLLDNADVICC 649
H ++SE L KL+Q K+ TG+ D RY S + +A VI C
Sbjct: 495 HGHSAKQTIDSEKLSKLMQRMNVKNKKTTGKDRLRDYLRY---------SFVKDARVITC 545
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
TCV AG + KF +LIDE++QATEP +VP+I ++LILVGDH QLGP ++ KKA
Sbjct: 546 TCVTAGQELFKRFKFPYVLIDEAVQATEPLTLVPLIYSCRKLILVGDHKQLGPTILNKKA 605
Query: 710 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG---VCADERKL 766
A AGL SLFERL+ LG+ P+ L VQYRMHP L ++ SN FY+G+L + A R
Sbjct: 606 ANAGLRVSLFERLIRLGVVPYLLTVQYRMHPVLCEWVSNTFYDGALVSAHYTHGAHARYG 665
Query: 767 SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
+ I + +P P FYV++G+EE+ SGTSY+N+ EA I G++ ++G+
Sbjct: 666 TGITAWFNLP-MPTFFYVSRGREELFISGTSYLNKAEAQQCLAIIRHLKMNGVRETEVGI 724
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPYEGQR L + L A EVA+VDAFQGREK II+S VRSN IGF
Sbjct: 725 ITPYEGQRVLLSR-------LTA-----CEVANVDAFQGREKAFIIISLVRSNSINDIGF 772
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
++D RR+ VALTRAK+G+ ++GNP K +W L+ +Y+ + VLVEG + L+ +L
Sbjct: 773 VSDRRRMCVALTRAKHGLFIVGNPGTFCKNKMWKELIAYYQGKGVLVEGEVEELRRCEVL 832
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 227/529 (42%), Gaps = 117/529 (22%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C YC H +++I C C + FCN T+ SHII HL + HK + + + ++
Sbjct: 3 CSYCEAH--SHLITCADCHQSFCNTFKGTTISHIIFHLKKNGHKRILIDR-------LIV 53
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
C CG ++F+L + D ++V C C +P++ ++ + W+
Sbjct: 54 CELCGQSDVFMLRGV----DGMIVCGC---CG-------------DGEPVVDGKALVPWV 93
Query: 222 VKVPTEQEQQRGRQVTSAQIA-----KLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
E + + SA+ K V N E T Q + + D H
Sbjct: 94 CSGRDEGARSKNDSGASAKNGEEMKEKTTAVEDGNDEKT-QKKARSSITRDGHS------ 146
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQY 336
D + + P V+L+ +Y
Sbjct: 147 DDTENKECALPRVQLKYT--------------------------------------NQEY 168
Query: 337 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDEL 396
+IF L+ E + +K KE T+E + VR++ N + A+FS + + R+ GDE+
Sbjct: 169 ISIFTSLITAECEQEKHNKERLTREKIFVRFE-HKNDRIFAHFSFCRDEMCARINIGDEV 227
Query: 397 KLRYSYDASKTWSGL--GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSF 454
K+ + + T G I +N + V ++K G + ++F W++ +
Sbjct: 228 KI---FVHTSTLKGFICNDTIYTEENIAEIVNTDVKYPDGE-------YRMEFPWRNVGY 277
Query: 455 DRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA--------PNLPDLN 506
RM+ AL + H + +++++ + K SA +P LN
Sbjct: 278 QRMKRALTSLK------------KKCAHRITQLIWKGKVKKRKSAHMHEIVVPDRMPPLN 325
Query: 507 RSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTE 566
Q A+ A+ L+L+QGPPGTGKT+T+A IVY L+K +LV APSNIAVD LT
Sbjct: 326 ECQKIAIDAALNNHLTLVQGPPGTGKTITTAAIVYNLLKHKKGKILVVAPSNIAVDNLTR 385
Query: 567 KIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
+I + G+ V+R+ +++RE + S + + LH ++ N E++++ K
Sbjct: 386 RILKCGIDVLRIVSRNREGLVSDLDDITLHKKV-----NREIERIADAK 429
>gi|412993880|emb|CCO14391.1| predicted protein [Bathycoccus prasinos]
Length = 1285
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 244/449 (54%), Gaps = 47/449 (10%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
P + +N+SQ A++ A+ + ++LIQGPPGTGKT T+ +V +K P+L + SNI
Sbjct: 723 PAMQHMNKSQHEALRAALFQRITLIQGPPGTGKTHTAVALVQMWLKCRTMPILCTSDSNI 782
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L + + R G++V R+ EA+ + + + I +E S + K
Sbjct: 783 AVDNLVDGLSRAGVRVARIGRP--EAVRQDLMPFMVES-IAGIEPGSNMSK--------- 830
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
+++Y+ + +L A+VIC TC GAG L + F + LIDE+ QATEP
Sbjct: 831 ------DQQYQAIN-----GVLRRAEVICATCAGAGSDILERFSFAACLIDEATQATEPA 879
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
+VP+ G KQ++L+GD QL P ++ + A GL SLFER++ GIR F L+VQYRMH
Sbjct: 880 TVVPMTKGCKQIVLIGDQNQLPPTIISRDADERGLGTSLFERMLSRGIRTFMLKVQYRMH 939
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGSGTSY 798
P ++KFPS FY L +G +R+ + F WPVP P+ F +G+E G S
Sbjct: 940 PAIAKFPSQQFYSNELLSGTPPSQRRAPQ-GFDWPVPAVPLAFVDCPEGEER--SDGASQ 996
Query: 799 VNRTEASNVEKITTRF------IRCGMKPEQIGVITPYEGQ-RAF-------LVQHMQYQ 844
+N EA V + + + C IG+++PY Q RA V+ ++
Sbjct: 997 MNTIEAQKVVTLVKKLMAEHEVLAC-----DIGIVSPYAAQVRAIKKLLQPNAVKRTRFD 1051
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
IEV S+D FQGREK++I+ SC R+N +GFL D RR+NV LTRA+ G+
Sbjct: 1052 APAAPDSDAAIEVCSIDGFQGREKEVIVFSCTRANLMGNVGFLADRRRVNVMLTRARRGL 1111
Query: 905 IVIGNPKVLSKQP-LWNNLLNFYKEQKVL 932
I++G+ + L +P +W L + E ++
Sbjct: 1112 IIVGHLRTLRGEPEVWGPWLTWAGENGLI 1140
>gi|440491771|gb|ELQ74381.1| RNA helicase nonsense mRNA reducing factor (pNORF1)
[Trachipleistophora hominis]
Length = 339
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 194/317 (61%), Gaps = 14/317 (4%)
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
L+ S + +A VI CTCV AG + KF +LIDE++QATEP +VP+I ++L
Sbjct: 17 LRDYLRYSFVKDARVITCTCVTAGQELFKRFKFPYVLIDEAVQATEPLTLVPLIYSCRKL 76
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDH QLGP ++ K+AA AGL SLFERL+ LG+ P+ L VQYRMHP L ++ SN FY
Sbjct: 77 ILVGDHKQLGPTILNKRAANAGLHVSLFERLIRLGVVPYLLTVQYRMHPVLCEWVSNTFY 136
Query: 752 EGSLQNG--VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
+G+L + + S W P FYV++G+EE+ SGTSY+N+ EA
Sbjct: 137 DGALVSAQYTHGAHVRYSAGTTAWFNLPMPTFFYVSRGKEELFVSGTSYLNKAEAQQCLA 196
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I G++ +G+ITPYEGQR L + EVA+VDAFQGREK
Sbjct: 197 IIRHLKMNGVRETDVGIITPYEGQRVLLSR------------LTACEVANVDAFQGREKA 244
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+S VRSN+ IGF++D RR+ VALTRAK+G+ ++GNP K +W L+ +Y+ +
Sbjct: 245 FIIISLVRSNNINDIGFVSDRRRMCVALTRAKHGLFIVGNPGTFCKNKMWKELIAYYQGK 304
Query: 930 KVLVEGPLNNLKESLIL 946
VLVEG + L+ +L
Sbjct: 305 GVLVEGEVEELRRCEVL 321
>gi|354546110|emb|CCE42839.1| hypothetical protein CPAR2_204820 [Candida parapsilosis]
Length = 1078
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 279/510 (54%), Gaps = 60/510 (11%)
Query: 465 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 524
A+D+ + ++I L + ++ F + +FS+ +LN SQ A++ + +S++
Sbjct: 581 AMDNLANPSFIKMLLGKEPIKQITFNNRV--NFSS----NLNDSQKAAIQSVLNNKISVV 634
Query: 525 QGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI-HRTGLKVVRVCAKS 582
QGPPGTGKT + QL++ + PVLV A SNIA+D + EK+ + G ++R+ A S
Sbjct: 635 QGPPGTGKTSAIYETIIQLLEALNTFPVLVVAASNIAIDNIAEKLLPKHGKSILRIAATS 694
Query: 583 REA---IDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
+E D P++ + LH++I + M+ + +++ +SS K++ + K K
Sbjct: 695 KEREYNRDHPLASICLHHKIFDA-MSMKHQQVQNDMRRGTSVSSNAYKQFALEKFQITKE 753
Query: 640 LLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPV-ILGAKQLILVGDH 697
+ A VI T V AG P+L + K +++DE+ Q++EP ++P+ + G ++ + VGD
Sbjct: 754 QVAQAKVILTTTVVAGGPQLKSLAKCPVVIMDEATQSSEPSTLIPLAVPGVEKFVFVGDQ 813
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLG--IRPFRLEVQYRMHPELSKFPSNFFYEGSL 755
QL + LS SLFER+++ G + P L++QYRMHP +S+FP FY G +
Sbjct: 814 RQLSCFSLI-----PNLSTSLFERVLLNGSYVSPHMLDIQYRMHPAISEFPRTRFYNGKV 868
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG--------SGTSYVNRTEASNV 807
+NG+ AD RK+ I P+ P+ F+ T G G +Y NR E S +
Sbjct: 869 KNGITADSRKMEGI------PENPVFFWNTNGNAREQSVRNFLREDRGYTYTNRDEVSYI 922
Query: 808 EKI-TTRFIRCGMKPEQIGVITPYEGQRAFLV-------------QHMQYQ--------G 845
+++ + I G+ E IGV+TPY GQR + + +Q +
Sbjct: 923 QQVLRSLLIEKGIHRENIGVVTPYSGQRDLISSVLVKDDIINPTNEELQVEVDIDDITND 982
Query: 846 SLPAKIY--QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
S P I+ I +AS+DAFQGREKD +IMSCVRSN+ IGFL D RRLNVALTRAKYG
Sbjct: 983 SKPVSIHIVSGIMIASIDAFQGREKDFMIMSCVRSNNQGTIGFLKDERRLNVALTRAKYG 1042
Query: 904 IIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
+I+IG+ L K LW + + +E+ ++
Sbjct: 1043 LIMIGDVNCLKKGDKLWKEYMQYLEEKGLI 1072
>gi|328866870|gb|EGG15253.1| hypothetical protein DFA_10087 [Dictyostelium fasciculatum]
Length = 854
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 246/463 (53%), Gaps = 39/463 (8%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV--KQ 546
F+ P + NL N SQ A++ +I R SLIQGPPGTGK+ T+ ++ LV KQ
Sbjct: 282 FKDMFPMDYKTWNL---NPSQKDAIEKSICRRASLIQGPPGTGKSTTAIYLLRLLVHRKQ 338
Query: 547 TGSP---VLVCAPSNIAVDQLTEKIHRTGLKVVRV--CAKSREAIDSPVSFLALHNQIRN 601
+G +L + +N VD L E + + G+ V+R+ K RE L
Sbjct: 339 SGKSNVKILATSFTNTGVDNLLEGLLKAGVNVLRLGDANKVREE---------LRCATLE 389
Query: 602 MEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS-LLDNADVICCTCVGAGDPRLL 660
M EL + + + + S Y M + KS L+ ADVIC TC+G+G L+
Sbjct: 390 YRMEEELNRWDSSAKRSNQGSKPGSSSYYMQSEREIKSRLISEADVICSTCIGSGHEMLM 449
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
KF I++DE+ QATEP ++P++ ++Q+ L GD QL P+++ KA GL+ S+F+
Sbjct: 450 DEKFQIIVVDEATQATEPAILIPLLKSSEQMYLFGDQNQLAPIILSHKAIEGGLNISMFD 509
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
RL G+ PF L QYRMH +S FP + FY G L NG K+ I WP D P+
Sbjct: 510 RLFKSGLTPFLLNTQYRMHSSISDFPRHHFYNGLLNNGTNDSNLKIP-IGIKWPQIDFPV 568
Query: 781 LFY-VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC--GMKPEQIGVITPYEGQRAFL 837
+F ++ G+EEI S N EA V ++ + + IG+ITPY Q +
Sbjct: 569 VFIDISNGREEIKHH--SLYNNEEAVAVVQVAESLLENDESLFRNNIGIITPYHAQVKHI 626
Query: 838 VQ----HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
Q ++G+ P+ VA+VD++QGRE D+II S VRSN IGFL D RRL
Sbjct: 627 NQVFSNDKSWRGAQPS-------VATVDSYQGREMDVIIFSTVRSNTKGNIGFLKDWRRL 679
Query: 894 NVALTRAKYGIIVIGNPKVL--SKQPLWNNLLNFYKEQKVLVE 934
NV++TRAK G++VIGN + S W + + K++ ++V+
Sbjct: 680 NVSITRAKRGLVVIGNFGTINNSSDEHWKAYVQWAKDKNIMVK 722
>gi|405976863|gb|EKC41342.1| Putative regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 207
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 140/210 (66%), Positives = 163/210 (77%), Gaps = 10/210 (4%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQL---DSVNQI 57
MSVDAY P+SQ+LTFL+ EE DLIG DTQG+++D+TDFTLPSQ+Q+Q +Q
Sbjct: 1 MSVDAYAPNSQSLTFLEPEE-DLIGADTQGTDYDYTDFTLPSQTQSQTQASQLEHGQSQS 59
Query: 58 QVNGK----QNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYV 113
QVNG QN + + ++Q + EL FEEEE+ +F K+LP HAC YCGIHDPA V
Sbjct: 60 QVNGPEAPIQNGLDKGVVGIAQGVGELTFEEEEE--EQFMMKDLPKHACSYCGIHDPASV 117
Query: 114 IMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVL 173
+ CN KKWFCNGRG+TSGSHIINHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+L
Sbjct: 118 VYCNSTKKWFCNGRGNTSGSHIINHLVRAKAKEVTLHKDGPLGETVLECYNCGCRNVFLL 177
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNW 203
GFIPAKADSVVVLLCR PCA +LKDMNW
Sbjct: 178 GFIPAKADSVVVLLCRQPCATLTNLKDMNW 207
>gi|145353588|ref|XP_001421091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581327|gb|ABO99384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/461 (36%), Positives = 241/461 (52%), Gaps = 32/461 (6%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV--------KQTGSPVLVCAP 556
LN SQ AVK A+ L++ QGPPGTGKT T + V + G VL A
Sbjct: 10 LNPSQRVAVKSALSSSLAVWQGPPGTGKTRTLIAYIGAAVHLASIQKRRGRGPIVLASAA 69
Query: 557 SNIAVDQLTEKIHRTG-------LKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELK 609
SN+AVD + E + + L+VVRV A ++ + + L L QI + +
Sbjct: 70 SNVAVDNILEGLAKESFIVDGRPLRVVRVGAPAK--VQPWLQQLTLDAQIALHPLGRQAA 127
Query: 610 KLLQ-LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
+ + ++ ++G + K+ L+ A KS+L + DV+C TCVGAGD L F +
Sbjct: 128 AMREAIRGQSGPAFARQRKQATQLELTAAKSILKSVDVVCTTCVGAGDELLEDFTFPVAV 187
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR 728
+DE+ Q TEP ++ + A +LVGD QL P V+ + A AGL S+FER+ LG++
Sbjct: 188 VDEATQCTEPGALIS-LTKALSAVLVGDSKQLPPTVVSRDAVDAGLQVSIFERMERLGVK 246
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQ 788
L++QYRMHP++++FPS FY+G + + +R L WP P+ P+ F
Sbjct: 247 VSLLDMQYRMHPQIAEFPSLAFYKGKVGSVPTPQDRPLVP-GIAWPSPNVPVAFVEISAP 305
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQIGVITPYEGQRAFLVQHMQYQGS 846
E A G S N EA + + + G P IGVI+PY Q L + GS
Sbjct: 306 ESRAPDGNSLYNVGEAKMAIGVVRKLLAAGDLAGPGDIGVISPYAAQVRRLQEEYGVGGS 365
Query: 847 LPAKIY---------QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
P + Y +E+E+ SVD FQGREK++I++ VRSN IGF+ DPRRLNV +
Sbjct: 366 -PKRNYLDYTEEDKIEELEIRSVDGFQGREKEVIVLCTVRSNPSGDIGFVADPRRLNVGI 424
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLN 938
TRAK G+IV+GN K LS +W + + EQ V N
Sbjct: 425 TRAKRGLIVLGNRKTLSNNEMWRSWFKWIDEQNCAVSDTTN 465
>gi|358057220|dbj|GAA96829.1| hypothetical protein E5Q_03501 [Mixia osmundae IAM 14324]
Length = 925
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 186/566 (32%), Positives = 274/566 (48%), Gaps = 88/566 (15%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQ---SVSAYIY-------------HRLLGHNVDE 486
+S++ W S+ R LA+ + D Q S +A I+ H LLG + +
Sbjct: 353 YSIELAWDDASYKRQSLAVDLLSTDLQPQLSYNASIFTKRTGAAYKKYPEHPLLGTGLRD 412
Query: 487 VLF------------------------------RCHLPKHFSAPNLPDLNRSQVYAVKHA 516
V+ R H P + DLNR+Q+ A+ +
Sbjct: 413 VILDDRLYAKGATDVPDFVASNQLLYSWVKRYTRSH-PIVLEGDPVLDLNRTQIRAIAQS 471
Query: 517 IQRPLSLIQGPPGTGKTVT--SATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+ +LIQGPPGTGK++T A + ++ Q P+LVCAP+++AVDQL + + GL+
Sbjct: 472 LSSRCALIQGPPGTGKSITIIEALRLLKVHFQVPQPILVCAPTHVAVDQLLARAVKAGLR 531
Query: 575 VVRVCAKSREAIDS-PVSFLA---LHNQIRNMEMNSELKKLLQLKEETGELSSADE---- 626
+RV + + + + P LA H +E+ S+ + L + G ++ DE
Sbjct: 532 PLRVGLEDKVSPSAEPYCMLAQVARHPFAEKLEVMSDRIRGLD-HQRIGPAATPDEAVDT 590
Query: 627 -------KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
RY L+ + N DVI TC+GA + I F + IDE+ Q E
Sbjct: 591 KFKRVLSSRY-FLESLIWADICSNVDVIFSTCLGASVSHVASIDFPIVFIDEAAQCNEAS 649
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRM 738
+VP++ G++QL+L+GDH QL + M A + G + SLFERL+V P L+ QYRM
Sbjct: 650 TLVPLMKGSQQLVLIGDHKQLPSIAMSPDATQEGFNISLFERLMVSKRVPSVMLDTQYRM 709
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKID--FPWPVPDKPMLFYVTQGQEEIAGSGT 796
HP++SKFP+ FY G L++ + K + I F + F G E+ G
Sbjct: 710 HPDISKFPNMAFYRGQLRDAPSTLKSKQAAIRSRFSPAGKSSALTFINCDGLEQ--KEGK 767
Query: 797 SYVNRTEASNVEKITTRFI--RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI-YQ 853
SY+N EA + I + ++ IG+ITPY GQ L + M PA
Sbjct: 768 SYINEGEAEEITLIVRDLLARNSDLRCSDIGIITPYAGQVHRLRRMMLQSWRFPAGARVD 827
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+IEV+SVD FQGREK++I+ S VRSN H +GFL+D RRLNVALTRAK + V+GN L
Sbjct: 828 QIEVSSVDGFQGREKEVIVFSAVRSNKHSQLGFLSDRRRLNVALTRAKAALFVVGNALTL 887
Query: 914 --------------SKQPLWNNLLNF 925
SK P+W+ + F
Sbjct: 888 QGKTPASGATAVSPSKTPIWSRYMRF 913
>gi|260949873|ref|XP_002619233.1| hypothetical protein CLUG_00392 [Clavispora lusitaniae ATCC 42720]
gi|238846805|gb|EEQ36269.1| hypothetical protein CLUG_00392 [Clavispora lusitaniae ATCC 42720]
Length = 1128
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 254/473 (53%), Gaps = 53/473 (11%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
N SQ A++ + ++++QGPPGTGKT T I+ QL++ + P+LV A SNIA+D
Sbjct: 661 FNDSQKVAIQSVLNNSITVLQGPPGTGKTSTIYEIILQLLENLNTFPILVVAASNIAIDN 720
Query: 564 LTEKIHRTGLK-VVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
+ EK+ K ++R+ + +E + P+S + LH+++ + + + +++
Sbjct: 721 IAEKLLPKHEKSILRIVSNEKEPEYNREHPLSSICLHHKVFDGLPLHFQETIREMRRPGS 780
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEP 678
+S K+ + + L+ +A VI T V AG +L + K +++DE+ Q++EP
Sbjct: 781 SISQNQYKKLLTAQIDYTNKLISSARVIFTTTVVAGGNQLKPVQKMPVVIMDEATQSSEP 840
Query: 679 ECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEVQ 735
++P+ + G ++ + VGD QL LS SLFER+++ G P L+ Q
Sbjct: 841 TTLIPLSMPGVEKFVFVGDQKQLSSFSQV-----PNLSLSLFERILLNGSYKTPHMLDTQ 895
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA--- 792
YRMHP +S FP FY G L++G+ A +R I P P+LF+ T G+
Sbjct: 896 YRMHPAISAFPRKKFYGGLLKDGITAADRTKPNI------PANPVLFWDTCGKAREGTVR 949
Query: 793 -----GSGTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLVQHMQYQGS 846
+G +Y NR E VEK+ T I G++ + IGVITPY GQR + +
Sbjct: 950 ARFREDNGLTYANRGEIDYVEKVLTALIYEKGIERKDIGVITPYRGQRDMMSSTLVKNDM 1009
Query: 847 L-PAKIYQEIEV----------------------ASVDAFQGREKDLIIMSCVRSNDHQG 883
+ P K+ +IEV AS+DAFQGREKD ++MSCVRSN+
Sbjct: 1010 INPEKVEVQIEVDRDDFFNESKPITIHMVSDIMIASIDAFQGREKDFLVMSCVRSNEQNK 1069
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNLLNFYKEQKVLVEG 935
IGFLND RR+NVALTRAKYG+I+IG+ + LS+ PLWN + K ++ G
Sbjct: 1070 IGFLNDARRMNVALTRAKYGLILIGDMECLSRSDPLWNEYIETLKANNCILTG 1122
>gi|308810613|ref|XP_003082615.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116061084|emb|CAL56472.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 545
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 233/450 (51%), Gaps = 30/450 (6%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV--------KQTGSPVLVCAP 556
LN SQ AVK A L++ QGPPGTGKT T + V + G VL A
Sbjct: 86 LNSSQRVAVKSATSSSLAVWQGPPGTGKTRTLIAYIGAAVHLASIQRRRGKGPVVLASAA 145
Query: 557 SNIAVDQLTEKIHRTG-------LKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELK 609
SN+AVD + E + + L+VVR+ A ++ + + L L QI + +
Sbjct: 146 SNVAVDNILEGLAKEKFVIDGRPLRVVRLGAPAK--VQPWLQELTLDAQIAQHPLGRQAA 203
Query: 610 KLLQ-LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
+ ++ +G + K+ L+ A KS+L + DV+C TCVGAGD L + F +
Sbjct: 204 AMRDAIRGLSGPAYARQRKQATQLELTAAKSILKSVDVVCSTCVGAGDDLLEDLTFPVTV 263
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR 728
+DE+ Q TEP ++ + A +LVGD QL P V+ + A AGL S+FER+ LG++
Sbjct: 264 LDEATQCTEPAALI-ALSKALSAVLVGDSRQLPPTVVSRDAVDAGLQISIFERMERLGVK 322
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQ 788
L++QYRMHP +++FPS FY G + + +R + WP P+ P++F
Sbjct: 323 VSLLDLQYRMHPLIAEFPSQAFYSGKVGSAPTPQDRPIVP-GVAWPKPNVPVVFLEINDA 381
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQIGVITPYEGQRAFLVQHMQYQGS 846
E A G S N EA + + + G P IGVI+PY Q L + G+
Sbjct: 382 ECRAPDGNSLYNVEEAKTAITVVKKILASGDLAGPGDIGVISPYAAQVRLLQEEYGVLGT 441
Query: 847 LPAKI--------YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
+E+E+ SVD FQGREK++I++ VRSN GIGF++DPRRLNV +T
Sbjct: 442 AKRNYLDYTDEDKMKELEIRSVDGFQGREKEVIVLCTVRSNTGGGIGFVDDPRRLNVGIT 501
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
RA+ G+IV+GN + LS +W + +
Sbjct: 502 RARRGLIVLGNRRTLSTNEIWRKWFKWIDQ 531
>gi|281208251|gb|EFA82429.1| hypothetical protein PPL_04854 [Polysphondylium pallidum PN500]
Length = 799
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/460 (33%), Positives = 255/460 (55%), Gaps = 46/460 (10%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL--VKQTGSP-----------V 551
+N SQ A+ +++R +SLIQGPPGTGK+ T+ +V L +K+ S +
Sbjct: 335 MNSSQRNAILSSVKRRVSLIQGPPGTGKSATAINLVRLLCHIKEKLSANDPGGVAASQKI 394
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL 611
LV + +N VD L + + + +KV+R+ S ++ + N ++ L +
Sbjct: 395 LVTSYTNTGVDNLLDGLLKYNVKVLRLGHTS-----------SVRPDLLNATLDHHLSEA 443
Query: 612 LQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDE 671
++ E++ + A+ ++++ + LL +VIC TC+ +G P L +F +++DE
Sbjct: 444 IKQYEKSPNYNPAN---IANIERDTKSKLLSQVNVICTTCIASGHPILTNERFSIVIVDE 500
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
+ QATEP +VP++ ++QL L GD QL P + K+A GLS LF+RL I PF
Sbjct: 501 ASQATEPAILVPLLKQSEQLFLFGDQNQLSPTIFTKEAEDGGLSIGLFQRLAN-DITPFL 559
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEI 791
LE QYRMH +L +FP+ + Y+G L+ G+ +R++ + F WP P+ F G+E+I
Sbjct: 560 LEEQYRMHSKLLEFPNKYIYDGKLKTGIDDKDRQIPR-GFDWPREQCPIAFVNVVGKEDI 618
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQIGVITPYEGQRAFLVQHMQYQ-GSLP 848
+ SY+N EA + +I ++ + + G+ITPY Q + ++ LP
Sbjct: 619 --NNYSYMNMPEAKEIVRILKAMVKENQDLTTDSFGIITPYSSQAKLICNLLRPDFRKLP 676
Query: 849 AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
VA+VD+FQGREK++I++S VRSN +GFLND RRLNV+LTRAK G+I++G
Sbjct: 677 T-------VATVDSFQGREKEIILVSTVRSNLGGRVGFLNDWRRLNVSLTRAKRGMIIVG 729
Query: 909 NPKVLSKQPL--WNNLLNFYKEQKVLV---EGPLNNLKES 943
N + L P WN + + ++ ++V P+ N++ S
Sbjct: 730 NKQTLESCPCEKWNQYIQWCTDESLIVLPQTQPIVNIESS 769
>gi|320582034|gb|EFW96253.1| ATP-dependent RNA helicase, putative [Ogataea parapolymorpha DL-1]
Length = 832
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 251/464 (54%), Gaps = 59/464 (12%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTG-SPVLVCAPSNIAVDQ 563
LN SQ A++ A+ +++++GPPG+GKT T ++ QL+ Q P+LV A SNIAVD
Sbjct: 368 LNESQSVALQSALNNQITILKGPPGSGKTSTIYEMILQLLDQLHYHPILVVAASNIAVDN 427
Query: 564 LTEKIHRTGLK-VVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
+ EK+ + ++RV + ++E+ D P++ + LH++IR+ + + L L TG
Sbjct: 428 IAEKMMKDHKDDIIRVLSMAKESEYNKDHPLADICLHHKIRDRLPSHAQETLRNLA--TG 485
Query: 620 ELSSADEKRYRML---KKNAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQA 675
+ + +++ L K+ + L+ A VI T V G P L + + ++IDE+ Q+
Sbjct: 486 KAHKVSKNQFKKLIETNKDLSRLLIGQAKVIFSTTVAIGGPHLRDLAQLPVVIIDEATQS 545
Query: 676 TEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRL 732
+EP ++P+ ++++ VGD QL K L SLFER + G P
Sbjct: 546 SEPSSLIPLAAPNVQKVVFVGDEAQLSSYTRVK-----SLEMSLFERTLKNGTYQSPLMF 600
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
+ QYRMHPE+S+FP FYEG L++G+ A++RK++ I +P + F+ G+ +
Sbjct: 601 DTQYRMHPEISEFPRMEFYEGKLKDGITAEDRKVAGISYP-------LFFWDHAGEARES 653
Query: 793 G---------SGTSYVNRTEASNVEKIT-TRFIRCGMKPEQIGVITPYEGQRAFLV---- 838
+G +YVNR E V +I T + + P +IGVITPY GQR +
Sbjct: 654 RVRSLRVGEETGYTYVNRGEVERVSRIVETLIVDKQIAPSRIGVITPYAGQRDLISASFK 713
Query: 839 ---------QHMQYQ--------GSLPAKIYQ--EIEVASVDAFQGREKDLIIMSCVRSN 879
Q +Q Q S A ++Q I VAS+DAFQGREKD I+MSCVRSN
Sbjct: 714 ENLLINPEKQEVQVQVDKEDVESDSKAATVHQVNGILVASIDAFQGREKDFIVMSCVRSN 773
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
+ IGFL D RRLNVALTRA+ ++ +G+ L LW + +
Sbjct: 774 SERNIGFLRDRRRLNVALTRARCSLLFVGDAHCLKGDQLWQSYI 817
>gi|149238832|ref|XP_001525292.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450785|gb|EDK45041.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1176
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 251/474 (52%), Gaps = 53/474 (11%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVD 562
+LN SQ A++ + +S+++GPPGTGKT + QL++ + P+LV A SNIA+D
Sbjct: 708 NLNDSQRAAIQSVLNNKISVVRGPPGTGKTSAIYETIIQLLESLNTYPILVVAASNIAID 767
Query: 563 QLTEKI-HRTGLKVVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
+ EK+ + G ++R+ A +E P+S + LH++I N + L+ T
Sbjct: 768 NIAEKLLPKHGKLILRITASEKEKEYNKSHPLSSICLHHKIYNALPLKFQQVQDDLRRGT 827
Query: 619 GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATE 677
G +S+ K + K K + A VI T V AG P++ + K +++DE+ Q++E
Sbjct: 828 GVVSANAYKNFMQEKFQITKQQVAQAKVILTTTVVAGGPQMKSVAKCPVVIMDEATQSSE 887
Query: 678 PECMVPV-ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEV 734
P ++P+ + GA + + VGD QL + LS SLFER+++ G P L+
Sbjct: 888 PSTLIPLAVPGADKFVFVGDQKQLSCFSLI-----PSLSTSLFERVLLNGTYKAPHMLDT 942
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG- 793
QYRMHP +S+FP N FY G L++G+ A R I P P+ F+ T+G+
Sbjct: 943 QYRMHPAISEFPRNRFYGGELKDGIDASARAREGI------PLNPVYFWDTRGKAREQSV 996
Query: 794 -------SGTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLVQHMQ--- 842
G +Y NR E S +++I I G+K E IGVITPY GQR + +
Sbjct: 997 LNYLREDRGYTYSNRDEISYIQQILRVLILEKGIKREDIGVITPYSGQRDLISSTLVKDE 1056
Query: 843 ------------------YQGSLPAKIY--QEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
S P I+ + +AS+DAFQGREKD ++MSCVRSN
Sbjct: 1057 VINPQREELKIEIDVDDIRNDSKPVNIHIVSGVMIASIDAFQGREKDFMVMSCVRSNTQG 1116
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS-KQPLWNNLLNFYKEQKVLVEG 935
IGFL D RRLNVALTRA+YG+I++G+ K L LW + + +E+K++ G
Sbjct: 1117 VIGFLRDERRLNVALTRARYGMIMVGDVKTLKLGDKLWKEYMEYLEERKLIHGG 1170
>gi|294657940|ref|XP_460248.2| DEHA2E21780p [Debaryomyces hansenii CBS767]
gi|199433066|emb|CAG88524.2| DEHA2E21780p [Debaryomyces hansenii CBS767]
Length = 1141
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 166/463 (35%), Positives = 254/463 (54%), Gaps = 56/463 (12%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
N SQ A++ + ++++QGPPG+GKT T I+ QL+ + P+LV A SNIA+D
Sbjct: 674 FNDSQKVAIQSVLNNSITVLQGPPGSGKTSTIYEIILQLLDNLNTFPILVVAASNIAIDN 733
Query: 564 LTEKI-HRTGLKVVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
+ EK+ + G ++R+ + +E + P++ + LH+++ + + + + ++ G
Sbjct: 734 IAEKLLEKHGRSILRIVSNEKEREYNREHPLASICLHHKVYDALPMAMKQTIDDMRRFNG 793
Query: 620 ELSSADEKRYRMLKKNAEKS--LLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQAT 676
S ++ + ++L K E S + A VI T V AG +L +K +++DE+ Q++
Sbjct: 794 PKVSQNQYK-KLLTKQIELSDIFIAQAKVIFTTTVVAGGNQLKSVKKLPVVIMDEATQSS 852
Query: 677 EPECMVPV-ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLE 733
EP ++P+ + G ++ + VGD QL LS SLFER+++ G P L+
Sbjct: 853 EPTTLIPLSVPGVQKFVFVGDQKQLSSFSQV-----PNLSLSLFERVLLNGTYRTPHMLD 907
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG--QEEI 791
QYRMHP +S+FP N FY L++G+ A++R L I P P+ F+ T G QEE
Sbjct: 908 TQYRMHPMISEFPRNRFYGSLLKDGITAEDRILEGI------PSNPVYFWDTCGTAQEER 961
Query: 792 A------GSGTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQR----AFLVQH 840
G +Y NR+E S + K+ I G+ +IG+ITPY GQR + LV++
Sbjct: 962 VRINFREDRGYTYSNRSEISYITKVVLNLIYDKGIPKSEIGIITPYRGQRDLISSILVKN 1021
Query: 841 MQ-----------------YQGSLPAKIY--QEIEVASVDAFQGREKDLIIMSCVRSNDH 881
Y S P I+ EI +AS+DAFQGREK+ +IMSCVRSN
Sbjct: 1022 DLINPEKNDILVEVDRDDIYNESKPVTIHTVSEIMIASIDAFQGREKNFLIMSCVRSNKE 1081
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLL 923
IGFL D RRLNVALTRAKYG+I+IG+ + L + PLW L
Sbjct: 1082 SNIGFLGDERRLNVALTRAKYGLIIIGDVQCLREGNPLWREYL 1124
>gi|190345609|gb|EDK37526.2| hypothetical protein PGUG_01624 [Meyerozyma guilliermondii ATCC
6260]
Length = 650
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 244/465 (52%), Gaps = 51/465 (10%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
+N SQ AV+ + ++++QGPPGTGKT T I+ QL + P+LV A SNIA+D +
Sbjct: 186 INESQKVAVQSVLNNAITVLQGPPGTGKTSTIHEIILQLSELKTFPILVVAASNIAIDNI 245
Query: 565 TEKIHRT-GLKVVRVCAKSRE---AIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
EK+ +T G +++R+ + +E + D P++ + LH+++ + + + L+
Sbjct: 246 AEKLIKTHGREILRIVSNEKEKEYSRDHPLASICLHHKVYDALPQQMKQTVDDLRRPFSN 305
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPE 679
+S K+ + A VI T V AG +L +K +++DE+ Q++EP
Sbjct: 306 VSQNSYKKLLTQQIKLSDMFTAQAKVIFTTTVVAGGNQLKSVKKLPVVIMDEATQSSEPT 365
Query: 680 CMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEVQY 736
++P+ + G + + VGD QL M LS SLFER+++ P L+ QY
Sbjct: 366 TLIPLSMPGVDKFVFVGDQRQLSSFSMV-----PNLSLSLFERVLLNNSYRNPHMLDTQY 420
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE------ 790
RMHP +S+FP FY+ L++G+ AD+R + I P+ P+ F+ T+G+
Sbjct: 421 RMHPAISEFPRVKFYDELLKDGITADDRAMDNI------PENPVYFWDTKGKAREDRVRY 474
Query: 791 --IAGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQ----- 842
G +Y N E V K+ + I + IGVITPY GQR + +
Sbjct: 475 GFREDRGYTYSNLNEIEYVTKVLMKLIYDKQVSKSDIGVITPYRGQRDLISNQLVKNDLI 534
Query: 843 ----------------YQGSLPAKIY--QEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
Y S P ++ I +AS+DAFQGREK+ ++MSCVRSN+ + I
Sbjct: 535 NPEKEEVQVEVDRDDIYNESKPVTVHLVSGIMIASIDAFQGREKNFLVMSCVRSNEERKI 594
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
GFLND RRLNVALTRAKYG+I+IG+ L LW L F +++
Sbjct: 595 GFLNDKRRLNVALTRAKYGLILIGDVSCLKGDELWREYLEFLEKK 639
>gi|145349529|ref|XP_001419184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579415|gb|ABO97477.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 479
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 216/395 (54%), Gaps = 37/395 (9%)
Query: 549 SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSEL 608
SP+L + SNIAVD L + + R G++V R+ +R M +
Sbjct: 8 SPILCTSDSNIAVDNLVDGLARAGVRVARI---------------GRPEAVRQDLMPYMI 52
Query: 609 KKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
+ + + + D + + +++A + L A+VIC TC GAG L K F + L
Sbjct: 53 ESIAGIDQ--------DCRWSKQQQRSAITNALRQAEVICATCAGAGSDILEKYSFQACL 104
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR 728
IDE+ QATEP ++P+ G KQ++L+GD QL P ++ ++A AGL +SLFER + GIR
Sbjct: 105 IDEATQATEPATVIPLTKGCKQVVLIGDQNQLPPTIISREAEAAGLGESLFERFIRAGIR 164
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQG 787
+ L+VQYRMHP ++ FPS FY+G L +G +R+ + + F WPVP PM F V +G
Sbjct: 165 TYMLKVQYRMHPAIALFPSKTFYKGELLSGTPPSQRR-APVGFDWPVPAVPMAFVNVEEG 223
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQ--------RAFLV 838
E G+S N E V I + + + P IGV+TPY Q R
Sbjct: 224 AER--SDGSSQTNPAEIQRVVNIVKKLAGQHEVLPGDIGVVTPYSAQARAIKKILRGNAP 281
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
+ ++ + +EVA+VD FQGREK++I+ SC R+N + +GFL D RR+NV LT
Sbjct: 282 ERTRFDAPADPTSMKAVEVATVDGFQGREKEVIVFSCTRANMNGNVGFLADTRRVNVMLT 341
Query: 899 RAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
RAK G+I++G+ K L + + +W L + +E ++
Sbjct: 342 RAKRGLIIVGHMKTLQQDEIVWKGWLKWARESGLI 376
>gi|146419989|ref|XP_001485953.1| hypothetical protein PGUG_01624 [Meyerozyma guilliermondii ATCC
6260]
Length = 650
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 245/465 (52%), Gaps = 51/465 (10%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
+N SQ AV+ + ++++QGPPGTGKT T I+ QL++ P+LV A SNIA+D +
Sbjct: 186 INESQKVAVQSVLNNAITVLQGPPGTGKTSTIHEIILQLLELKTFPILVVAASNIAIDNI 245
Query: 565 TEKIHRT-GLKVVRVCAKSRE---AIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
EK+ +T G +++R+ + +E + D P++ + LH+++ + + + L+
Sbjct: 246 AEKLIKTHGREILRIVSNEKEKEYSRDHPLASICLHHKVYDALPQQMKQTVDDLRRPFSN 305
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL-LKIKFHSILIDESMQATEPE 679
+S K+ + A VI T V AG +L L K +++DE+ Q++EP
Sbjct: 306 VSQNLYKKLLTQQIKLSDMFTAQAKVIFTTTVVAGGNQLKLVKKLPVVIMDEATQSSEPT 365
Query: 680 CMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEVQY 736
++P+ + G + + VGD QL M LS SLFER+++ P L+ QY
Sbjct: 366 TLIPLSMPGVDKFVFVGDQRQLSSFSMV-----PNLSLSLFERVLLNNSYRNPHMLDTQY 420
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE------ 790
RMHP +S+FP FY+ L++G+ AD+R + I P+ P+ F+ T+G+
Sbjct: 421 RMHPAISEFPRVKFYDELLKDGITADDRAMDNI------PENPVYFWDTKGKAREDRVRY 474
Query: 791 --IAGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQ----- 842
G +Y N E V K+ + I + IGVITPY GQR + +
Sbjct: 475 GFREDRGYTYSNLNEIEYVTKVLMKLIYDKQVSKSDIGVITPYRGQRDLISNQLVKNDLI 534
Query: 843 ----------------YQGSLPAKIY--QEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
Y S P ++ I +AS+DAFQGREK+ ++MSCVRSN+ + I
Sbjct: 535 NPEKEEVQVEVDRDDIYNESKPVTVHLVSGIMIASIDAFQGREKNFLVMSCVRSNEERKI 594
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
GFLND RRLNVALTRAKYG+I+IG+ L LW L F +++
Sbjct: 595 GFLNDKRRLNVALTRAKYGLILIGDVSCLKGDELWREYLEFLEKK 639
>gi|403222822|dbj|BAM40953.1| regulator of nonsense transcripts-related protein [Theileria
orientalis strain Shintoku]
Length = 1221
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 225/426 (52%), Gaps = 29/426 (6%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT-GSPVL 552
P + P L SQ A AI PL+LIQGPPGTGKT + I+ K +L
Sbjct: 747 PTNKMLPTTMSLTPSQHMACLSAITNPLTLIQGPPGTGKTHVACAIIDSWNKMYPDVRIL 806
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAI-DSPVSFLALHNQIRNMEMNSELKKL 611
A +N+A D L E + + G+ +R+ A S + + + L +N M M
Sbjct: 807 AVADTNVAADNLIEGLSKRGITALRIGASSEWDLQEEAIKGLYRYNNYLQMRM------- 859
Query: 612 LQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDE 671
G A+ R + + +K ++ TCVG+G+ L F +++DE
Sbjct: 860 ------AGMHKEANTLRVLLFTEAIKKH-----KIVIATCVGSGNEILSSHTFPFVIVDE 908
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
Q+ E M+P+ G + L+L+GDH QL P ++ +A+ GL++SL ERL+ + P
Sbjct: 909 CAQSIEASNMIPIGRGCRSLVLIGDHKQLRPTIISMQASTLGLNKSLLERLIEDKVAPVH 968
Query: 732 L-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQE 789
L ++Q RMHP +++FP+ FY+G ++N D + + F WPV ++F V+ G
Sbjct: 969 LLDIQRRMHPSIAEFPNMHFYDGQIRNQDVNDTNRPPILGFKWPVCGNNLVFVDVSTGSP 1028
Query: 790 EI---AGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQG 845
GTS N E + V + F++ G +K QIG++TPY+ QR + +++ Y
Sbjct: 1029 NTQFETSHGTSKFNTMELTCVLALVNSFLKAGDVKENQIGILTPYDAQRGMIRKNVNYMK 1088
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
+ IE+ SVD FQG+EKDLII S VRSN + IGFL DPRR+NV LTRAK G+I
Sbjct: 1089 DYKTHL---IEIDSVDGFQGKEKDLIIFSAVRSNVSKDIGFLRDPRRMNVMLTRAKRGLI 1145
Query: 906 VIGNPK 911
++G+ +
Sbjct: 1146 ILGDER 1151
>gi|432328902|ref|YP_007247046.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
gi|432135611|gb|AGB04880.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
Length = 650
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 190/552 (34%), Positives = 284/552 (51%), Gaps = 92/552 (16%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
VD +F RM A+ S+ Y RL G +L R +L H N +
Sbjct: 121 VDLYANDITFQRMLEAV-------NSIKREEYLRLRGI----ILGRANLEIHEEQVNFEN 169
Query: 505 --LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
LN Q AV+ +I L LI GPPGTGKT T A + Q+V++ G VL A SN+AVD
Sbjct: 170 TRLNEFQRRAVRRSIGSELFLIHGPPGTGKTTTLAEGIVQMVRR-GFKVLATADSNVAVD 228
Query: 563 QLTEKI-HRTGLKVVRVCAKSR-------EAIDSPVS-------FLALHNQIRNM--EMN 605
L EK+ H+ + VVR+ +R +D VS + L +I M E +
Sbjct: 229 NLVEKLAHK--VNVVRIGHPARISKSIIEHTLDYIVSRDIEYRKAMELWERIDGMREEQS 286
Query: 606 SELKKLLQLKEETGE-----LSSA-------------------------DE--KRYRMLK 633
K Q + G+ L++A DE KR + ++
Sbjct: 287 RYTKPTPQWRRGMGDDEIVYLANASRSYRGVPVEVMKGMAQWIKIQRRIDEYVKRAKKME 346
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ A +LDNADVIC T AG L +KF ++IDE+ QA EP C++P++ G + +++
Sbjct: 347 ERAIIRVLDNADVICTTNSTAGGEMLRDLKFDFVVIDEATQAVEPSCLIPMLKGTR-ILM 405
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFF 750
GDH QL P VM A L +LFERL+ I P L +QYRM+ ++ +FPSN F
Sbjct: 406 AGDHKQLPPTVMSYDAK--ALQLTLFERLI--KIYPQASITLRIQYRMNEKIMEFPSNMF 461
Query: 751 YEGSLQNGVCADERKLSKIDF-PWPV--------PDKPMLFYVTQGQEEIAGSGTSYVNR 801
Y G L+ +R ++ + P + P++ ++F + +EE TSY N
Sbjct: 462 YRGLLEAHRTVKDRTIADVGIDPSRISEMRDICNPEEVIIFVDLETEEEQRRGSTSYQNP 521
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
EA V +I ++ G+K + IG+ITPY+ Q L + +P +++E+ SVD
Sbjct: 522 GEARCVTRIVNCLLKIGLKEKHIGIITPYDDQVDLL------KSIIPN---EDLEIKSVD 572
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
FQGREK++I++S VR+ND +GFL D RRLNVA+TRAK +I++GN K L P++++
Sbjct: 573 GFQGREKEVIVISFVRANDRGELGFLTDLRRLNVAITRAKRKLIIVGNSKTLRAHPVYDS 632
Query: 922 LLNFYKEQ-KVL 932
L+++ + + KVL
Sbjct: 633 LIDYIEHRGKVL 644
>gi|156087819|ref|XP_001611316.1| regulator of nonsense transcripts [Babesia bovis T2Bo]
gi|154798570|gb|EDO07748.1| regulator of nonsense transcripts, putative [Babesia bovis]
Length = 1086
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 240/448 (53%), Gaps = 35/448 (7%)
Query: 495 KHFSAPNLP-----DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
K NLP L +Q A ++A+ PL+LIQGPPGTGKT + I+ L+++T
Sbjct: 628 KEVDCSNLPLSTRIPLTDTQAAACRYALSHPLTLIQGPPGTGKTQVACAIIDCLIRKTSE 687
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELK 609
+L A SN+A D L E + R G++ +RV S + Q +++ +
Sbjct: 688 KILAVADSNVAADNLIEGLDRRGIQALRVGFGSESLL-----------QEESLKRCTRYG 736
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
+ L+E +G A+ R M+ + VI TCVG+G+ L F ++I
Sbjct: 737 RYRYLRE-SGMHKEANSMRVLMIL-----DAIKTHQVIIATCVGSGNDVLAGYSFPYVII 790
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI-R 728
DE Q+ EP ++P+ G +QL+L+GDH QL P ++ +AA GLS SL E LV + +
Sbjct: 791 DECAQSIEPSNLIPIGKGCRQLVLIGDHMQLRPTIISTEAASEGLSSSLLENLVNANVGK 850
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT--- 785
L+VQ RMHP +S+FP+N FY+G + + + + R K F WP P + F
Sbjct: 851 VHLLDVQRRMHPSISEFPNNQFYKGLITDAIEENSRNPIK-GFEWPSPAYNIAFIDASSG 909
Query: 786 --QGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQ 842
GQ E + GTS N E + + F+ G ++ IG++T Y+ Q+ L + +
Sbjct: 910 GPNGQFE-SVVGTSRSNALEVEIILMLLKSFLDAGDVRESDIGILTAYDAQKWQLRRKVN 968
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
+ A Q IE+ SVD FQG+EK+LI+ S VRSN+H+ IGFL DPRR+NV LTRA+
Sbjct: 969 QMFGINA---QAIEIDSVDGFQGKEKELILFSGVRSNNHKDIGFLKDPRRMNVMLTRARR 1025
Query: 903 GIIVIGNP-KVLSKQPLWNNLLNFYKEQ 929
G+IV+ + +++ W +++ ++
Sbjct: 1026 GLIVVADKFTIMNDISNWRRYMDYITDR 1053
>gi|220931020|ref|YP_002507928.1| putative DNA helicase [Halothermothrix orenii H 168]
gi|219992330|gb|ACL68933.1| putative DNA helicase [Halothermothrix orenii H 168]
Length = 754
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 176/501 (35%), Positives = 260/501 (51%), Gaps = 99/501 (19%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
DLN SQ AVK AIQ R + LIQGPPGTGKTVT+ +V Q VK +G VL A SN+AVD
Sbjct: 270 DLNLSQKNAVKKAIQARDIYLIQGPPGTGKTVTAVEVVNQAVK-SGKRVLATAESNVAVD 328
Query: 563 QLTEKIHRTGLKVVRVCAKSR------------EAIDSPVSFLALH-------------- 596
L E++ GL V+RV R +D P+ AL+
Sbjct: 329 NLVERLVGYGLNVIRVGHPFRVTPLLREHTLDYRVLDHPLYKKALNLREKASDLKEKQEG 388
Query: 597 --------------NQIR-NMEMN-----------SELKKLLQLKEETGELSSADEKRYR 630
QIR N N E+ K L ++EE +L +
Sbjct: 389 LTSPSGQWRRGMSDKQIRINARKNRSFRGVPAKRIKEMAKWLGIQEEINQLFD----KIN 444
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
L++ A + LL++ADV+C T AG L +F ++IDE+ QATEP ++P+I A++
Sbjct: 445 SLEERAVRDLLNSADVVCSTNSTAGSELLEGWEFELVVIDEATQATEPGALIPLI-KAQK 503
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF--RLEVQYRMHPELSKFPSN 748
+L+GDH QL P V+ +KA + GLS+SLFERL L + LE+QYRM+ + +F ++
Sbjct: 504 AVLIGDHKQLPPTVLSQKADKQGLSKSLFERLYSLYGDKYCSLLEIQYRMNDLIMEFSNS 563
Query: 749 FFYEGSLQN------------------GVCADERKLSKIDFPWPVPDKPMLFYVT---QG 787
FY G L++ G C E+ PD P++F T +
Sbjct: 564 HFYGGRLKSAPEVRNHTLRDLGIEISEGKCFTEKGFD--------PDNPVVFLDTSNMEA 615
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
+E + SY N EA V + ++ G++ I VITPY+ Q L+ H+
Sbjct: 616 RERSLPNSDSYDNPVEAEIVLDLVGEALKLGLEQRHIAVITPYKDQ-VDLLNHLSR---- 670
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
++ +E+ +VD FQGREK+++++S VRSN H+ IGFL D RRLNVA+TR K +I+I
Sbjct: 671 ----FENLEINTVDGFQGREKEVVMISLVRSNKHRNIGFLRDLRRLNVAITRPKRKLIII 726
Query: 908 GNPKVLSKQPLWNNLLNFYKE 928
G+ +S ++++L+++ +E
Sbjct: 727 GDSNTISGHEVYSSLVDYVRE 747
>gi|365983354|ref|XP_003668510.1| hypothetical protein NDAI_0B02320 [Naumovozyma dairenensis CBS 421]
gi|343767277|emb|CCD23267.1| hypothetical protein NDAI_0B02320 [Naumovozyma dairenensis CBS 421]
Length = 1185
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 258/487 (52%), Gaps = 66/487 (13%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNI 559
N LN SQ AV+H + +++IQGPPGTGKT T I+ QL++ S P+L A SNI
Sbjct: 709 NRSTLNDSQKLAVQHVLNNSITVIQGPPGTGKTSTIEEIILQLIENFHSFPILCVAASNI 768
Query: 560 AVDQLTEKI--HRTGLKVVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQL 614
A+D + EKI R +K++R+ + +E+ D P+ + LHN+I ++ E+K +
Sbjct: 769 AIDNIAEKIMESRPNIKILRILSDKKESQYGPDHPLGKICLHNKIYE-RLSPEMKDIAN- 826
Query: 615 KEETG---ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILID 670
K G E+S + +Y K + L+ +I T + AG +L IK +++D
Sbjct: 827 KFRFGRRDEVSKNQDNKYYQEKTSITNKLVAQTQIIFTTNITAGGRQLKVIKELPVVIMD 886
Query: 671 ESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI-- 727
ES Q++E +VP+ L G K+ + VGD QL + L SLFER++ G
Sbjct: 887 ESTQSSEASTLVPLSLPGIKKFVFVGDEKQLSSF-----SNIPHLEMSLFERILANGTYE 941
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ- 786
+P L+ QYRMHP++SKFP + FY G L++GV A++++L I P + FY +
Sbjct: 942 QPHMLDTQYRMHPQISKFPIHKFYYGELKDGVTAEQKQLPNIKHP-------LFFYQSNN 994
Query: 787 GQEEIAGS------GTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLVQ 839
G E + +Y N+ E ++ KI + I +K E+IG+ITPY QR L +
Sbjct: 995 GYESTVENRQNGIKAFTYNNKYECQDILKILYKLILEKNVKHEEIGIITPYSAQRDLLSE 1054
Query: 840 HM-------QYQGSL-----------------------PAKIYQEIEVASVDAFQGREKD 869
+ Y S+ I + VA+VD+FQG EK+
Sbjct: 1055 LLVADPVVNPYGRSMEQETDEAEFLNSKHTLGNDIQSHTVNIINGLHVATVDSFQGHEKN 1114
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKE 928
II SCVR+N IGFL D RRLNVALTR+K G+I++GN +VL K LW + + F ++
Sbjct: 1115 FIIFSCVRNNPENKIGFLRDRRRLNVALTRSKNGLILVGNKEVLKKGDNLWRDFMVFLEK 1174
Query: 929 QKVLVEG 935
+KV+ +
Sbjct: 1175 EKVIFDS 1181
>gi|195165352|ref|XP_002023503.1| GL20399 [Drosophila persimilis]
gi|194105608|gb|EDW27651.1| GL20399 [Drosophila persimilis]
Length = 209
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/186 (63%), Positives = 146/186 (78%), Gaps = 6/186 (3%)
Query: 1 MSVDAYGPSSQTLTFLDTEETDLI-GGDTQGSEFDFTDFTLPSQSQTQA-SQLDSVNQIQ 58
MSVD Y PSS L+FLD ++ +L+ G DTQ +++D+ DFT+PS SQ+Q +L + + +
Sbjct: 1 MSVDTYAPSS-ALSFLDMDDNELLPGADTQPTQYDYRDFTMPSNSQSQTQGELLEITRRR 59
Query: 59 VNGKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNI 118
G+ + L ++ L +LQFEEE+D+ F KELPPHACKYCGIHDP+ V+MCN
Sbjct: 60 SVGEMH---PRLASITNDLGDLQFEEEDDEHGGSFVKELPPHACKYCGIHDPSTVVMCNN 116
Query: 119 CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPA 178
CKKWFCNGRG TSGSHIINHLVRAKH+EVTLH DGPLGETVLECY+CGVRN+FVLGFIPA
Sbjct: 117 CKKWFCNGRGSTSGSHIINHLVRAKHREVTLHADGPLGETVLECYSCGVRNVFVLGFIPA 176
Query: 179 KADSVV 184
KADSVV
Sbjct: 177 KADSVV 182
>gi|256421450|ref|YP_003122103.1| ATPase AAA [Chitinophaga pinensis DSM 2588]
gi|256036358|gb|ACU59902.1| AAA ATPase [Chitinophaga pinensis DSM 2588]
Length = 635
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 280/544 (51%), Gaps = 57/544 (10%)
Query: 422 GDEVGLELKSSAGAPTEATTG-FSVDFIWKSTSFDRMQLALRKF-AVDDQSVSAYIYHRL 479
G+++ + L++ P A G +D ++ S+D MQ AL++ + ++ + ++ L
Sbjct: 101 GNKLKITLRTDE-LPEWANNGKLGIDLLFDDNSYDEMQNALKQADTLAEKGENDHLIRVL 159
Query: 480 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSAT 538
G F +LP +P LN SQ +AV + L+++ GPPGTGKT T
Sbjct: 160 TGEKSPG--FHDNLPPVI----IPRLNASQQHAVNRILAANDLAIVHGPPGTGKTTTLVQ 213
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
+ L+KQ +LV APSN AVD L+EK+ GL V+RV +R + +S L L ++
Sbjct: 214 AIKALIKQDNKQILVVAPSNTAVDLLSEKLSEEGLNVLRVGNPAR--VSERLSSLTLDSR 271
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKK---------------------NAE 637
M ++ +K++ +LK++ E K R K N E
Sbjct: 272 ---MTEHASMKEIKRLKKQANEFRDMAHKYKRNFGKAEREQRKALFDEARNIMKSVENTE 328
Query: 638 KSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ ++D+ A +I T VGA + K+K+H+I+IDE+ QA EP C +P IL A+++IL
Sbjct: 329 QYIMDDLMAKAQIITATLVGANHYTVRKLKYHTIVIDEAGQALEPACWIP-ILKAQKVIL 387
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF-RLEVQYRMHPELSKFPSNFFYE 752
GDHCQL P V +AAR GLS +L E+ + L LE QYRMH + + S FY
Sbjct: 388 AGDHCQLSPTVKSDEAARKGLSTTLLEKCIALHPESVVLLEEQYRMHEMIMGYSSAVFYA 447
Query: 753 GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG-QEEIAGSGTSYVNRTEASNVEKIT 811
L+ L FP D P+ F T G + GTS N EA+ + K
Sbjct: 448 DKLKAHASVAAHTL----FP---DDMPLSFVDTAGCGFDEKTEGTSTTNPEEAAFLFKHL 500
Query: 812 TRFI---RCGMKPEQ---IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
+F+ +P+Q I +I+PY+ Q L + + L A I V ++D+FQG
Sbjct: 501 RQFVTGLHTHYQPQQFPSIAIISPYKQQIHILKEQLLSVPELQA-YGDRISVNTIDSFQG 559
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
+E+D++ +S RSN+ IGFL+D RR+NVA+TRA+ +++IG+ LS+ P + + +
Sbjct: 560 QERDIVYISMTRSNNDNKIGFLSDIRRMNVAMTRARKKLVIIGDSATLSQLPFYAGFIAY 619
Query: 926 YKEQ 929
++Q
Sbjct: 620 AEQQ 623
>gi|87311458|ref|ZP_01093578.1| DNA-binding protein [Blastopirellula marina DSM 3645]
gi|87285870|gb|EAQ77784.1| DNA-binding protein [Blastopirellula marina DSM 3645]
Length = 687
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/448 (38%), Positives = 240/448 (53%), Gaps = 36/448 (8%)
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ AV+ A+ R S+I GPPGTGKT+T A IV V + G VL CAPSN+AV
Sbjct: 240 PQLNASQQAAVQLALSARDFSIIHGPPGTGKTITLAEIVRAAVAR-GEKVLACAPSNLAV 298
Query: 562 DQLTEKIHRTGLKVVRVCAKSR--EAIDSPV--SFLALHNQIRNME-MNSELKKLLQ--- 613
D L E+ GLK VR+ +R E++ + + + H + E + SE K L +
Sbjct: 299 DNLVERFWACGLKAVRLGHPARVSESLHDALLEALVREHPDAKLAEKLVSEAKTLFRKAD 358
Query: 614 ----LKEETGELSSADEKRYRMLKKNAE------KSLLDNADVICCTCVGAGDPRLLKIK 663
K GE S ++ +L A + LLD+A V+CCT G D L +
Sbjct: 359 RFTRSKPAPGEKRSLRDEARELLDDAARIQQQTLERLLDDAPVVCCTLTGVDDDLLGARR 418
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F +IDE+ Q TEP C +PV +++L++ GDHCQL P ++ ++A AG S+ ERL+
Sbjct: 419 FDLAVIDEACQTTEPACWIPVSR-SQRLVIAGDHCQLPPTIVSREAEAAGFGVSMLERLI 477
Query: 724 VLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
+ RLE+QYRMH + +F S FY+G+L + L+ + + KP+ F
Sbjct: 478 ARYPQAAQRLELQYRMHAHIMEFSSLEFYDGALLADPSVEAHSLTDLIAADELWAKPVQF 537
Query: 783 YVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
+ T G QEE S +S N EA V + + I M PEQI VI+PY Q L +
Sbjct: 538 FDTAGADYQEEQDDS-SSRTNPREAELVVRKVNQLIALEMPPEQIAVISPYAAQVRLLRE 596
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
SLP + E SVD FQGRE++++I S VRSN+ IGFL D RR+NVA+TR
Sbjct: 597 ------SLPGGV----ECDSVDGFQGREQEVVICSLVRSNEKGEIGFLADVRRMNVAMTR 646
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
AK +IVIG+ + + L + +
Sbjct: 647 AKRKLIVIGDSSTIGGNEFYARFLEYVE 674
>gi|344303867|gb|EGW34116.1| hypothetical protein SPAPADRAFT_134155 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1098
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/507 (34%), Positives = 268/507 (52%), Gaps = 58/507 (11%)
Query: 465 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 524
A+D S + +I L + +++F K+F LN SQ A++ ++++
Sbjct: 597 AMDSLSNNNFIKMLLGKEPIRQIVF-----KNFLRYTRDTLNDSQKQAIQSIFNNAITVL 651
Query: 525 QGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKIHRTGLK-VVRVCA-- 580
QGPPGTGKT T I+ QL+ + P+LV APSNIA+D + EK+ T K ++RV A
Sbjct: 652 QGPPGTGKTSTIFEIILQLLDSLNTYPILVVAPSNIAIDNIAEKLMPTHEKDLLRVVASE 711
Query: 581 KSREAIDSP-VSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
K RE S +S + LH++I + ++K + + K++ + K
Sbjct: 712 KEREYNKSHHLSSICLHHKIYEGLSTRSQTIVDEIKRGKPSVGTTGYKKFVQERFQVTKK 771
Query: 640 LLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPV-ILGAKQLILVGDH 697
++ A VI T V AG +L I K +++DE+ Q++EP ++P+ + G + + VGD
Sbjct: 772 MVAQAKVIFTTTVVAGSGQLKSISKCPVVIMDEATQSSEPTTLIPLSVPGVDKFVFVGDQ 831
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSL 755
QL + GLS SLFER+++ G P L+ QYRMHP +S+F N FY G L
Sbjct: 832 KQLNCFSLV-----PGLSLSLFERVLLNGTYKTPHMLDTQYRMHPTISEFARNRFYGGLL 886
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG--------SGTSYVNRTEASNV 807
++G+ A++RK+ I P+ P+ F+ T G+ G +Y N E + V
Sbjct: 887 KDGITAEDRKMEGI------PENPVYFWNTNGKAREKSVHNWLREDRGFTYTNPGEINYV 940
Query: 808 EKITTRF-IRCGMKPEQIGVITPYEGQRAFL-------------VQHMQYQ--------G 845
++ I G+K E IG+ITPY GQR + + ++ +
Sbjct: 941 IQVVKNLIIEKGIKREDIGIITPYSGQRDLISSILVKDDIINPQSEELRIEVDIDDIKND 1000
Query: 846 SLPAKIY--QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
S P I+ I +AS+DAFQGREK+ ++MSCVRSN IGFL D RRLNVALTRAKYG
Sbjct: 1001 SKPVTIHIVSGILIASIDAFQGREKNFMVMSCVRSNVEGKIGFLRDERRLNVALTRAKYG 1060
Query: 904 IIVIGNPKVL-SKQPLWNNLLNFYKEQ 929
+++IG+ L S LWN+ ++ K++
Sbjct: 1061 MVIIGDENCLRSGDKLWNSYMDHLKDK 1087
>gi|238880082|gb|EEQ43720.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1105
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 255/476 (53%), Gaps = 64/476 (13%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVD 562
+LN SQ V+ + ++++QGPPGTGKT T I+ QL+ + P+LV A SNIA+D
Sbjct: 639 NLNESQKKGVQSVLNNSITVLQGPPGTGKTSTIYEIILQLLDSLNTYPILVVAASNIAID 698
Query: 563 QLTEKIH-RTGLKVVRVCAKSREA---IDSPVSFLALHNQIRN-MEMNSELKKLLQLKEE 617
+ EK+ + G ++R+ A +E P++ + LH+++ + M M K Q+ +E
Sbjct: 699 NIAEKLMTKHGKDILRITAAEKERDYNRSHPLASICLHHKMYDAMPM-----KYQQVMDE 753
Query: 618 -----TGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
+ + K+Y + ++ A V+ T V AG + L ++IDE+
Sbjct: 754 MKRGMAPSIGTTAYKKYAQERFFLSNQIVTQAKVVLATPVVAGGIKSLN-NVRVVIIDEA 812
Query: 673 MQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RP 729
Q++EP ++P+ L ++L+LVGD QL + LS SLFER+++ G P
Sbjct: 813 TQSSEPTTLIPLALPSVEKLVLVGDQKQLSCFSLI-----PNLSLSLFERVLLNGTYKTP 867
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
L+ QYRMHPE+S+FP FY G L++G+ A+ R+ V P+ F+ T+G
Sbjct: 868 HMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSEG------VISSPLYFWDTKGNA 921
Query: 790 EIAG--------SGTSYVNRTEASNVEKI-TTRFIRCGMKPEQIGVITPYEGQR----AF 836
G +Y NR E + ++++ T I G+KPEQIG+ITPY GQR A
Sbjct: 922 REQSVRNFLREDGGYTYTNRDEIAYIQQVLRTLIITKGVKPEQIGIITPYSGQRDLISAT 981
Query: 837 LV---------QHMQYQ--------GSLPAKIY--QEIEVASVDAFQGREKDLIIMSCVR 877
LV + M+ + S P I+ I +AS+DAFQGREKD +IMSCVR
Sbjct: 982 LVKDDVINPSNEQMKTEVDIDDLKNDSKPVTIHIVSGIMIASIDAFQGREKDYMIMSCVR 1041
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
SN IGFL D RRLNVALTRAKYG+I++G+ K L LW L + +K +
Sbjct: 1042 SNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQNGDKLWKEYLQYLDSKKAI 1097
>gi|68488735|ref|XP_711793.1| potential helicase, zinc finger protein [Candida albicans SC5314]
gi|68488772|ref|XP_711775.1| potential helicase, zinc finger protein [Candida albicans SC5314]
gi|46433099|gb|EAK92553.1| potential helicase, zinc finger protein [Candida albicans SC5314]
gi|46433118|gb|EAK92571.1| potential helicase, zinc finger protein [Candida albicans SC5314]
Length = 1105
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 254/476 (53%), Gaps = 64/476 (13%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVD 562
+LN SQ V+ + ++++QGPPGTGKT T I+ QL+ + P+LV A SNIA+D
Sbjct: 639 NLNESQKKGVQSVLNNSITVLQGPPGTGKTSTIYEIILQLLDSLNTYPILVVAASNIAID 698
Query: 563 QLTEKIH-RTGLKVVRVCAKSREA---IDSPVSFLALHNQIRN-MEMNSELKKLLQLKEE 617
+ EK+ + G ++R+ A +E P++ + LH+++ + M M K Q+ +E
Sbjct: 699 NIAEKLMTKHGKDILRITAAEKERDYNRSHPLASICLHHKMYDAMPM-----KYQQVMDE 753
Query: 618 -----TGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
+ + K+Y + ++ A V+ T V AG + L ++IDE+
Sbjct: 754 MKRGMAPSIGTTAYKKYAQERFFLSNQIVTQAKVVLATPVVAGGIKSLN-NVRVVIIDEA 812
Query: 673 MQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RP 729
Q++EP ++P+ L ++L+LVGD QL + LS SLFER+++ G P
Sbjct: 813 TQSSEPTTLIPLALPSVEKLVLVGDQKQLSCFSLI-----PNLSLSLFERVLLNGTYKTP 867
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
L+ QYRMHPE+S+FP FY G L++G+ A+ R+ V P+ F+ T+G
Sbjct: 868 HMLDTQYRMHPEISEFPRTKFYGGLLKDGIDANARQSEG------VISSPLYFWDTKGNA 921
Query: 790 EIAG--------SGTSYVNRTEASNVEKI-TTRFIRCGMKPEQIGVITPYEGQR----AF 836
G +Y NR E ++++ T I G+KPEQIG+ITPY GQR A
Sbjct: 922 REQSVRNFLREDGGYTYTNRDEIGYIQQVLRTLIITKGVKPEQIGIITPYSGQRDLISAT 981
Query: 837 LV---------QHMQYQ--------GSLPAKIY--QEIEVASVDAFQGREKDLIIMSCVR 877
LV + M+ + S P I+ I +AS+DAFQGREKD +IMSCVR
Sbjct: 982 LVKDDVINPSNEQMKTEVDIDDLKNDSKPVTIHIVSGIMIASIDAFQGREKDYMIMSCVR 1041
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
SN IGFL D RRLNVALTRAKYG+I++G+ K L LW L + +K +
Sbjct: 1042 SNTKGVIGFLRDERRLNVALTRAKYGLIMVGDKKCLQNGDKLWKEYLQYLDSKKAI 1097
>gi|387790987|ref|YP_006256052.1| ATPase [Solitalea canadensis DSM 3403]
gi|379653820|gb|AFD06876.1| Putative ATPase (DUF699) [Solitalea canadensis DSM 3403]
Length = 642
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 174/517 (33%), Positives = 264/517 (51%), Gaps = 58/517 (11%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA----P 500
+D ++ TS+ M LR A + A + LLGH+ P FSA
Sbjct: 129 IDLLFDETSYKEMDDTLRIVAEAQNNRLAELREILLGHS----------PASFSADFYTS 178
Query: 501 NLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
LN SQ AV + + ++++ GPPGTGKT T + Q+ + VLV APSN
Sbjct: 179 ESQQLNTSQNSAVHNILNANDVAIVHGPPGTGKTTTFVEAIKQVTLKE-KQVLVTAPSNT 237
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L E++ GL VVR+ +R + ++ L + N+I E +++K + + EE
Sbjct: 238 AVDLLCERLSAQGLNVVRIGHPAR--VGDHLADLVIDNKISQHEYFNDIKSIRKKAEEFR 295
Query: 620 ELS-------SADEKRYRMLKKNAEKSL---------------LDNADVICCTCVGAGDP 657
++ +E R R L N +SL L A VI CT VG+ +
Sbjct: 296 NMAFKYKRNFGKEESRQRQLLFNEARSLKQEAIKLEDYIVSDILSEAQVIACTLVGSNNS 355
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
L +F ++ IDE+ QA EP C +P I+ A+++I+ GDHCQL P V +A + GL+ +
Sbjct: 356 VLRDRQFKTVFIDEAAQALEPACWIP-IMKAQRVIMAGDHCQLPPTVKSYEAGKQGLNVT 414
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
LFE+++ LEVQYRM+ + +F + FY G L RKL K D +
Sbjct: 415 LFEKVIERQKVDTLLEVQYRMNKAIMEFSNQQFYRGKLTAFETVANRKLVKED------E 468
Query: 778 KPMLFYVTQG--QEEIAGSGTSYVNRTEAS--------NVEKITTRFIRCGMKPEQIGVI 827
P+LF T G E +G S N E + ++++T K ++GVI
Sbjct: 469 NPLLFIDTAGCGFNERTENGRSASNPEEGNLLMNYLNDYLQQLTNYDNEVMDKIRRVGVI 528
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+PY+ Q +FL + ++ +L A + ++I +VD FQG+E DLI +S VRSN+ IGFL
Sbjct: 529 SPYKAQVSFLTEQLENFETL-ASLGKKISFNTVDGFQGQECDLIAISLVRSNEKNEIGFL 587
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
D RR+NVA+TRAK +++IG+ LS P + + L+
Sbjct: 588 ADTRRMNVAITRAKKKLLIIGDSATLSSHPFYASFLD 624
>gi|225851051|ref|YP_002731285.1| DNA helicase [Persephonella marina EX-H1]
gi|225645408|gb|ACO03594.1| putative DNA helicase [Persephonella marina EX-H1]
Length = 653
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 276/551 (50%), Gaps = 92/551 (16%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
+D +F RM L F ++ S + +LG N V C F +L
Sbjct: 125 IDLFVNDITFKRMSGTLHMF---EKGYSFFPEDTVLGDNGYTV---CEEEIQFFNESL-- 176
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
N+ Q AVK A+ L +I GPPGTGKT T ++ Q V + G VL A SN AVD
Sbjct: 177 -NQFQREAVKKAVCSDKLFMIHGPPGTGKTTTLLEVIIQHVSK-GDRVLATADSNTAVDN 234
Query: 564 LTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLAL----HNQIRNMEMNSELKKLLQLKE 616
+ E + G+ VVR+ +R E +D + +A +N++R++E ++KKL L+E
Sbjct: 235 IVEGLVERGVNVVRIGHPARLKKELLDVSLDAVAESHPDYNEVRSIE--KKIKKLKSLQE 292
Query: 617 ETGE--------LSSADEKRY------------RMLKKNAE------------------- 637
+ LS +D +Y LK AE
Sbjct: 293 SYKKPTAQRRRGLSYSDILKYAKSGKKVRGHRIETLKSMAEWIRLQKEIKKLSDRKRKIE 352
Query: 638 ----KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+L++A+VIC T AG L F + IDE+ Q+TEP C++PVI G K +++
Sbjct: 353 DRIINDILNSAEVICATNSTAGSEFLSDYVFDVVFIDEASQSTEPSCLIPVIKGLK-VVM 411
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFF 750
GDH QL P V+ A LS ++FER + I P + L++QYRM+ + +FPS F
Sbjct: 412 AGDHKQLPPTVLNPDAK--DLSFTMFERF--MKIYPENTYMLKIQYRMNDIIKQFPSEEF 467
Query: 751 YEGSLQNGVCADERKLSKI-----DFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRT 802
Y+G L + +RKLS I D P D P++F T+G +++ GS + Y N
Sbjct: 468 YDGQLISDESVKDRKLSDITGKEGDAPI-TDDTPVVFIDTEGKFLEKQKKGSRSKY-NPE 525
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA V+ I + G+ E IGVITPY+ +L KI ++EV +VD
Sbjct: 526 EAKAVKSIVEKLKEIGVLTEDIGVITPYKDHEDYL-----------KKIIPDVEVKTVDG 574
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREK++I++S VRSN + IGFL+D RRLNVALTRAK +I+IG+ K LS + L
Sbjct: 575 FQGREKEVIVISLVRSNPEEEIGFLDDLRRLNVALTRAKRKVIIIGDSKTLSSNETYRKL 634
Query: 923 LNFYKEQKVLV 933
+ F KE+ V
Sbjct: 635 IKFIKEKGTFV 645
>gi|448527318|ref|XP_003869468.1| Ecm32 protein [Candida orthopsilosis Co 90-125]
gi|380353821|emb|CCG23333.1| Ecm32 protein [Candida orthopsilosis]
Length = 1103
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 269/508 (52%), Gaps = 51/508 (10%)
Query: 465 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 524
A+D+ S ++I L + ++ F + +FS+ +LN SQ A++ + +S++
Sbjct: 604 AMDNLSNPSFIKMLLGKEPIKQIFFNNRV--NFSS----NLNDSQKAAIQSVLNNKISVV 657
Query: 525 QGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI-HRTGLKVVRVCAKS 582
QGPPGTGKT + QL++ + P+LV A SNIA+D + EK+ + G ++R+ A S
Sbjct: 658 QGPPGTGKTSVIYETLIQLLESLNTYPILVVAASNIAIDNIAEKLLSKHGKSILRITASS 717
Query: 583 REA---IDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
+E P++ + LH++I + + L+ TG +S K++ K K
Sbjct: 718 KEKEYNRAHPLASICLHHKIYDAMSMKHQQVQNDLRRGTGVISGNAYKQFMQEKFQLTKQ 777
Query: 640 LLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVILG-AKQLILVGDH 697
+ + VI T V AG +L + K +++DE+ Q++EP ++P+ + A++ + VGD
Sbjct: 778 QVAQSKVILTTTVVAGGNQLKSLAKCPVVIMDEATQSSEPSTLIPLAVPCAEKFVFVGDQ 837
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSL 755
QL + L+ SLFER+++ P L+ QYRMHP +S+FP FY G L
Sbjct: 838 KQLSCFSLI-----PNLATSLFERVLLNATYKSPHMLDTQYRMHPAISEFPRTKFYNGEL 892
Query: 756 QNGVCADERKLSKID---FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI-T 811
++G+ AD R+++ I + W K V E G ++ N E S V+++
Sbjct: 893 KDGIDADARRINGIPESLYFWDTKSKAREKSVRNLLRE--DGGYTFTNHEEVSYVQQVLK 950
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLV-------------QHMQYQ--------GSLPAK 850
T + G+ + IGVITPY GQR + + +Q + S P
Sbjct: 951 TLIVEKGISRDNIGVITPYSGQRDLISSILVKDDVINPANEDLQIEIDIDDITNDSKPVN 1010
Query: 851 IY--QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
I+ I +AS+DAFQGREKD +IMSCVRSN IGFL D RRLNVALTRAKYG+I++G
Sbjct: 1011 IHIVSGIMIASIDAFQGREKDFMIMSCVRSNKQGTIGFLKDERRLNVALTRAKYGLIMVG 1070
Query: 909 NPKVLSK-QPLWNNLLNFYKEQKVLVEG 935
+ + L K LW + Y E+K L+ G
Sbjct: 1071 DVECLKKGDKLWKEYME-YLEKKKLIHG 1097
>gi|401625974|gb|EJS43946.1| ecm32p [Saccharomyces arboricola H-6]
Length = 1129
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/509 (34%), Positives = 263/509 (51%), Gaps = 77/509 (15%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + +++++GPPGTGKT T
Sbjct: 636 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKIAVEHVLNNSITVLRGPPGTGKTSTIE 690
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
++ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E D P+
Sbjct: 691 EVIIQVIERFHAFPILCVAASNIAIDNIAEKILENRPQIKILRILSKKKEQQYGDDHPLG 750
Query: 592 FLALHNQI-RNMEMNSELKKLLQLKEETGE-LSSADEKRYRMLKKNAEKSLLDNADVICC 649
+ LHN + +N+ S +L+ + GE +S +++ ++ K ++ + +I
Sbjct: 751 EICLHNIVYKNL---SPDMRLVANRARRGEIISKSEDTKFYKEKTRITNKVVSQSQIIFT 807
Query: 650 TCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL
Sbjct: 808 TNIAAGGRELKIIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIP 867
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+ L SLFER++ G P L+ QYRMHP++S+FP Y G L+NGV ++
Sbjct: 868 Q-----LEASLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKNGVTEKQK- 921
Query: 766 LSKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
WP + P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 922 ------AWPGVEHPLFFYQCDLGPESRVRSTQRDIV--GFTYENKHECEEIVKIIQILML 973
Query: 817 CGMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE------------- 856
P E+IGVITPY QR L + + P +I Y EIE
Sbjct: 974 DKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGSEAASSL 1033
Query: 857 ------------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G+
Sbjct: 1034 QNNVINIVNGLHVATVDSFQGHEKSFIIFSCVRNNAENKIGFLRDKRRLNVALTRAKHGL 1093
Query: 905 IVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
IV+GN VL K PLW + + + +EQ +
Sbjct: 1094 IVVGNKNVLKKGDPLWRDYVTYLEEQNAI 1122
>gi|440300434|gb|ELP92903.1| hypothetical protein EIN_312750 [Entamoeba invadens IP1]
Length = 1343
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/516 (33%), Positives = 257/516 (49%), Gaps = 99/516 (19%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV------------KQTG 548
N +LN SQ+ AV A+ LSL+ GPPGTGKT + +IV ++ TG
Sbjct: 414 NPVELNASQIAAVLSALNNHLSLVVGPPGTGKTSVAVSIVQHILFYREKIEIQRIEMNTG 473
Query: 549 --------------SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREA--------- 585
VLV A SN AV+ L E++ G+ VVR+ A + A
Sbjct: 474 RDFIPHRGKDISINKKVLVSASSNNAVNVLCERLVDFGISVVRIPADEKYADLSDKVRGV 533
Query: 586 --------------IDSPVSFLA-----LHNQIRNMEMNSELKKLLQLKEETGE------ 620
+D + L+ L +I + E K++ +++EE E
Sbjct: 534 SLLYRAYEYCKHADVDKDGNSLSDIQNLLKKKIDSFFTQQENKEICRIEEEYKESPKLQL 593
Query: 621 --------LSSADEKRYR----MLKKNAEKSLLD-----------NADVICCTCVGAGDP 657
LS A+ K Y+ L K++ D N DVI T A
Sbjct: 594 MFKDFQKYLSFANNKLYQRKRITLSDTENKTINDFTRINLAEITENYDVIAATLSKA--- 650
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
+ KIKF +IDES Q+ EPE I+ ++ +L+GD QL P V+ +A GL +S
Sbjct: 651 -VFKIKFACAVIDESAQSIEPETFSG-IMNVQKAVLIGDIQQLPPTVVSNEAKNGGLEKS 708
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
+FERL+ G+ L QYRMHP +S+FP+N FY G L +GV D+R +I+ +P +
Sbjct: 709 MFERLLQNGVAYALLTTQYRMHPAISQFPNNNFYNGKLVDGVDEDDRFDERIEGLFPNNE 768
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
P++F +G E SG SY N E V+ + + ++ ++IG+I+PY QR L
Sbjct: 769 FPVMFVHCKGDEFYGTSGKSYGNDEEKKVVKFMVKKLNEKNIRDDEIGIISPYATQRELL 828
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
+ ++ IEV+SVD FQG EK II+SCVRSN+++GIGF+ D RRLNV+L
Sbjct: 829 GEE-----------HKTIEVSSVDGFQGNEKPFIIISCVRSNENRGIGFVGDHRRLNVSL 877
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
TRAKYG+++IG+ L P++ NL+ F ++ V
Sbjct: 878 TRAKYGLVIIGDAYTLMINPIFKNLMKFLYDKNCFV 913
>gi|149276566|ref|ZP_01882710.1| DNA helicase [Pedobacter sp. BAL39]
gi|149233086|gb|EDM38461.1| DNA helicase [Pedobacter sp. BAL39]
Length = 634
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 269/524 (51%), Gaps = 67/524 (12%)
Query: 443 FSVDFIWKSTSFDRMQLALRKF-AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
VD ++ S+D MQ AL++ ++D Q +A + L G+ E H+
Sbjct: 121 LGVDVLFDQNSYDEMQHALKQADSIDGQGGTADLVKTLTGNRTPEFSI-----AHYQYL- 174
Query: 502 LPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
+P LN Q AV + L+++ GPPGTGKT T V L KQ +LV APSN A
Sbjct: 175 IPSLNVMQQLAVDKILSADHLAIVHGPPGTGKTTTLVQAVKALSKQDHQQILVAAPSNTA 234
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VD LTEK+ GL V+R+ SR + + L L ++ M + E+K+ LK++ E
Sbjct: 235 VDLLTEKLAEQGLNVLRIGNPSR--VSERLMSLTLDSR---MAEHPEMKQAKALKKQANE 289
Query: 621 LSSADEKRYRML---KKNAEKSLLD----------------------NADVICCTCVGAG 655
+ K R +K K+L D ADVI T VGA
Sbjct: 290 YKNMAHKYKRNFGKAEKEQRKALFDEAHKIMKEVGNIEQYVSDDIISKADVIAATLVGAN 349
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
+ K+K+ +++IDE+ QA EP C +P+I ++++I GDHCQL P + +AA+ GLS
Sbjct: 350 HHTIRKLKYKTVIIDEAGQALEPACWIPII-KSEKVIFAGDHCQLSPTIKSNEAAKKGLS 408
Query: 716 QSLFERLV-------VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
+L E++V VL LE QYRM+ + ++ S FY+G L+ A + +
Sbjct: 409 NTLMEKMVNQYPESVVL------LEEQYRMNRSIMEYSSEVFYQGKLK----AHDSVATH 458
Query: 769 IDFPWPVPDKPMLFYVTQGQE-EIAGSGTSYVNRTEASNVEK-----ITTRFIRCGMKP- 821
+ + DKP+LF T G E G S N EAS V K + +R ++
Sbjct: 459 LLYD---DDKPLLFIDTAGASFEEKTEGHSISNPDEASFVSKQLETLVQELSLRYSIEDF 515
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+ +I+PY+ Q + + +Q+ + K +I V ++D+FQG+E+D++++S VRSND
Sbjct: 516 PTVAIISPYKQQIVHIKELLQHSPDID-KFKSKISVNTIDSFQGQERDVVVISMVRSNDE 574
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
IGFL D RR+NVA+TRA+ +IVIG+ L + P + N + +
Sbjct: 575 GIIGFLADIRRMNVAMTRARKKLIVIGDSATLCRLPFYENFIAY 618
>gi|448113163|ref|XP_004202282.1| Piso0_001771 [Millerozyma farinosa CBS 7064]
gi|359465271|emb|CCE88976.1| Piso0_001771 [Millerozyma farinosa CBS 7064]
Length = 1097
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 161/491 (32%), Positives = 265/491 (53%), Gaps = 63/491 (12%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + + +++FR ++ + LN+SQ AV+ + ++++QGPPG+GKT T
Sbjct: 609 LLGKDPIKQIVFRNYVKYSRDS-----LNQSQKVAVQSVLNNSITVLQGPPGSGKTSTIF 663
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKIH-RTGLKVVRVCAKSREA---IDSPVSF 592
I+ QL+ + P+LV A SNIA+D + EK+ L ++R+ A +E D +
Sbjct: 664 EIILQLLDNLNTFPILVVAASNIAIDNIAEKLMGNHALSILRIVANDKEKEYNRDHYLGS 723
Query: 593 LALHNQIRNMEMNSELKKLL-QLKEETGELSSADEKRYRMLKKNAEKS--LLDNADVICC 649
+ LH+++ + ++ +K+++ LK L S ++ + ++L + S + A VI
Sbjct: 724 ICLHHKVYD-SLSMYMKEIMDNLKNGRSHLVSQNQYK-KLLAEQIRLSDMFIAQAKVIFT 781
Query: 650 TCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T V AG +L +K +++DE+ Q++EP ++P+ + G + + VGD QL
Sbjct: 782 TTVVAGGNQLKSVKKLPVVIMDEATQSSEPTTLIPLSMPGVDKFVFVGDQKQLSSFSQV- 840
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
LS SLFER+++ G P L+ QYRMHP +S+FP FY G L++G+ AD+RK
Sbjct: 841 ----PNLSLSLFERVLLNGTYKSPHMLDTQYRMHPLISEFPRKRFYGGLLKDGITADDRK 896
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIA--------GSGTSYVNRTEASNVEKITTRFI-R 816
+ + P+ P+ F+ T G+ + G +YVNR E ++++ I
Sbjct: 897 MDGL------PENPVYFWDTVGKCRESRIKVGFREDRGYTYVNRPEVDLIKQVVINLIYE 950
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQY---------------------QGSLPAKIY--Q 853
+K IGVITPY GQR + + + P I+
Sbjct: 951 HNVKRSDIGVITPYRGQRDLISSELVKDTLINPENKELYVEVDRDDIDNDTKPVTIHMVS 1010
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+I +AS+DAFQGREK+ ++MSCVRSN +GFL+D RRLNVALTRAKYG++++G+ L
Sbjct: 1011 DIMIASIDAFQGREKNFMVMSCVRSNAENKVGFLSDERRLNVALTRAKYGLVLVGDKTCL 1070
Query: 914 SKQPLWNNLLN 924
P+W+ ++
Sbjct: 1071 KSSPVWDEYIS 1081
>gi|268324732|emb|CBH38320.1| putative ATP-dependent helicase [uncultured archaeon]
Length = 658
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 276/552 (50%), Gaps = 93/552 (16%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN------VDEVLFRCHLPKH 496
+D +F RM AL++F + + + +LLG+ VD++ F
Sbjct: 126 LRIDLFVNDITFQRMIEALKQF----KRLPRWRKDKLLGNTAPAFTQVDKIEF------- 174
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F++ LN+SQ AV ++ R LI GPPGTGKT+T ++ QL+K+ G+ +L A
Sbjct: 175 FNSK----LNKSQQEAVIRSLAARDFFLIHGPPGTGKTITCVEVIAQLIKR-GNKILTAA 229
Query: 556 PSNIAVDQLTEKIHRTGLKVVR-------VCAKSREAID-----SPVSFLALHNQIRNME 603
SN+AVD L E++ R G+ VVR + A R ++D P A + R E
Sbjct: 230 DSNVAVDNLVERLDRIGVNVVRIGHPARIIPALRRRSLDYLVQDEPDYRKAQEFRKRAYE 289
Query: 604 MNSELKKLLQ----------------------------LKEETGELSSADEKR------- 628
+ ++K+ + LK+ G D K
Sbjct: 290 LKEDMKRYIMPEMRWRRGLSDEEIMLLASEGATTRGIPLKKIEGMKKWLDLKHELDRLFG 349
Query: 629 -YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
R L++ A + ++ A VIC T AG L KF +IDE+ Q+TEP ++ V L
Sbjct: 350 DARELEERAIRRIIKAAAVICTTNSTAGSEILKGEKFDFAVIDEATQSTEPSALIAV-LK 408
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKF 745
AK+ I+ GDH QL P V+ ++AA ++SLFERL+ L R L+VQYRM+ E+++F
Sbjct: 409 AKRFIMAGDHKQLPPTVLNEEAACRSFTKSLFERLLALHGDKIRVMLDVQYRMNEEIAEF 468
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPD-----KPMLFYVTQG----QEEIAGSGT 796
P+ FY+G L+ R L I P V + KP LF T G +E + T
Sbjct: 469 PNWEFYDGKLKADEQVKRRTLMDI-LPESVDEESEDVKPFLFIDTGGNAELEERVRKGST 527
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
S N EA V+ + R + G++PE I VI+PY+ Q + + + +G +E
Sbjct: 528 SRENPGEARLVKDVAERLLNRGIRPEDIAVISPYDDQVVHIKRMLHVEG---------LE 578
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
+ +VD FQGREK+++I+S VRSN + IGFL D RRLNV++TRAK +++IG+ L +
Sbjct: 579 IKTVDGFQGREKEVVIVSFVRSNKSRTIGFLKDLRRLNVSITRAKRKLVLIGDSNTLESE 638
Query: 917 PLWNNLLNFYKE 928
+ L+ KE
Sbjct: 639 GCYRRLVALAKE 650
>gi|412987528|emb|CCO20363.1| predicted protein [Bathycoccus prasinos]
Length = 985
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 245/487 (50%), Gaps = 55/487 (11%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT---------------- 547
+LN SQ AVK A+Q L+L +GPPGTGKT T ++ +V
Sbjct: 507 NLNPSQRKAVKAAMQNTLTLWRGPPGTGKTRTLVALIASVVNYANVQENGGKSDRGKSSN 566
Query: 548 ------GSPVLVCAPSNIAVDQ-----LTEKIHRTGLKVVRVCAKSREA---IDSPVSF- 592
G VL CA SN+AVD L EKI R+ + ++R+ + +R ++S +S
Sbjct: 567 TQASWRGPKVLACAASNVAVDNILDALLREKIDRS-MNILRLGSPARVQPWLLESTLSHK 625
Query: 593 LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
+ALH + E NS ++ + T ++ K+ + L + A +++ +DVI TCV
Sbjct: 626 VALHP--KGKEANSIRERFRGI---TSLEAAKARKQAQQLDREAAIQVVNASDVILATCV 680
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
GAGD L F +DE+ Q EP ++P + A +LVGD QL P V+ + A
Sbjct: 681 GAGDDLLADRVFRYAFVDEAAQCVEPHTLIP-LTKALAGVLVGDTKQLPPTVVSRDAVAI 739
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
GL +SL ERL +LG+ P+ LE QYRMHP L+ F S FY+ L++ ER ++
Sbjct: 740 GLQRSLIERLELLGVEPYLLEEQYRMHPGLAAFSSVRFYDRRLKSVPKPSER-VAPNGVN 798
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQIGVITPY 830
WP P+ F +G+E A G S N EA ++ + + G IG+I PY
Sbjct: 799 WPSTMVPLAFVEVKGEEMRAPDGNSIFNVQEAEECVRVVQKLLLSGDVKNAGDIGIIAPY 858
Query: 831 EGQ-RAF-------------LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCV 876
Q RA L + P E+E+ SVD FQGREK++I++ V
Sbjct: 859 AAQVRAISEEWNRKVTSDVKLKNTSVVEADNPESAKDELEIRSVDGFQGREKEVIVLCTV 918
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
R+N +GF+ DPRRLNVA+TRAK G+IV+G+ LS LW L F + + VE
Sbjct: 919 RNNRQNQLGFVADPRRLNVAITRAKRGLIVLGHRDTLSTDQLWQKWLQFVDKYECEVESA 978
Query: 937 LNNLKES 943
L ES
Sbjct: 979 DVFLDES 985
>gi|431799922|ref|YP_007226826.1| type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
gi|430790687|gb|AGA80816.1| Type III restriction enzyme, res subunit [Echinicola vietnamensis
DSM 17526]
Length = 643
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 262/527 (49%), Gaps = 69/527 (13%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
VD + S+ M+ A+++ + + + LLG ++ F LPK AP+L
Sbjct: 126 LGVDLHFDEASYREMEYAVQQVIKAGEGRLGQLRNVLLGQ--EKASFVRGLPKSVEAPHL 183
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
N SQV AV+ + + ++L+ GPPGTGKT T + + ++ + VLVCAPSN AV
Sbjct: 184 ---NHSQVEAVEMVLAAQEVALVHGPPGTGKTTTMVQAIEETLR-SHRQVLVCAPSNAAV 239
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
D L EK+ GL +R+ +R +D + L +I +LKKL + EE +L
Sbjct: 240 DLLVEKLLAIGLSTLRIGHPAR--VDDELLEQTLDAKIAQHSSFRDLKKLRKAAEEYRKL 297
Query: 622 SSADEKRYRMLKKNAEKSLLDNAD----------------------VICCTCVGAGDPRL 659
++ + ++ K L A VI T VGA P L
Sbjct: 298 GRKYKRNFGAAERQQRKQLFAEASKVKEAARHLEDYILYDVFQQNQVIATTLVGANHPVL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ F + IDE+ Q EP +PV L A+++++ GDHCQL P + +AA+ GLS++LF
Sbjct: 358 KGMAFPVVFIDEAAQGLEPATWIPV-LKAQKIVMAGDHCQLPPTIKSYEAAKDGLSETLF 416
Query: 720 ERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
E+++ R L VQYRM + +F S +FY G L+ DE L D+
Sbjct: 417 EKVIQRQPEASRMLRVQYRMPELIMRFSSEYFYHGQLEAAALTDEHFLGH--------DE 468
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGM-----------------KP 821
++ Y+ + AGSG + E ++ K+ T R G+ K
Sbjct: 469 RVMAYI-----DTAGSG--FGEHLEKDSLSKLNTDEARFGLGMLEKLVEKIGVSTFKEKA 521
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ---EIEVASVDAFQGREKDLIIMSCVRS 878
IGVI+PY+ Q L + M+ +GS + Q + + ++D FQG+E+D++++S VRS
Sbjct: 522 FTIGVISPYKAQVKKLAELME-EGSEYENLRQLSDHVTIGTIDGFQGQERDVVLISMVRS 580
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
ND IGFL D RR+NVALTRAK ++V+G+ LS P + L+F
Sbjct: 581 NDEGEIGFLADTRRMNVALTRAKRKLMVVGDSGTLSTHPFYQKFLDF 627
>gi|241958926|ref|XP_002422182.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645527|emb|CAX40186.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1107
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 252/476 (52%), Gaps = 64/476 (13%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVD 562
+LN SQ V+ + ++++QGPPGTGKT T I+ QL+ + P+LV A SNIA+D
Sbjct: 641 NLNESQKKGVQSVLNNSITVLQGPPGTGKTSTIYEIILQLLDSLNTYPILVVAASNIAID 700
Query: 563 QLTEKIH-RTGLKVVRVCAKSREA---IDSPVSFLALHNQIRN-MEMN-----SELKKLL 612
+ EK+ + G ++R+ A +E P++ + LH+++ + M M E+K+ +
Sbjct: 701 NIAEKLMTKHGKDILRITAGEKERDYNRSHPLASICLHHKMYDAMPMKYQQVLDEMKRGM 760
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
T ++R+ + ++ A V+ T V AG + L ++IDE+
Sbjct: 761 APSIGTTAYKKFAQERFFL-----SNQIVTQAKVVLATPVVAGGIKSLN-NVRVVIIDEA 814
Query: 673 MQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RP 729
Q++EP ++P+ L ++L+LVGD QL + LS SLFER+++ G P
Sbjct: 815 TQSSEPTTLIPLALPSVEKLVLVGDQKQLSCFSLI-----PNLSLSLFERVLLNGTYKTP 869
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
L+ QYRMHPE+S+FP FY G L++G+ A R+ V P+ F+ T+G
Sbjct: 870 HMLDTQYRMHPEISEFPRTKFYGGLLKDGIDASARQSEG------VISSPLYFWDTKGNA 923
Query: 790 EIAG--------SGTSYVNRTEASNVEKI-TTRFIRCGMKPEQIGVITPYEGQR----AF 836
G +Y NR E ++++ T I G+ PEQIG+ITPY GQR A
Sbjct: 924 REQSVRNFLHEDGGYTYTNRDEIGYIQQVLRTLIITKGVNPEQIGIITPYSGQRDLISAT 983
Query: 837 LV---------QHMQYQ--------GSLPAKIY--QEIEVASVDAFQGREKDLIIMSCVR 877
LV + M+ + S P I+ I +AS+DAFQGREKD +IMSCVR
Sbjct: 984 LVKDDVINPSNEQMKTEVDIDDLKNDSKPVTIHIVSGIMIASIDAFQGREKDYMIMSCVR 1043
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
SN IGFL D RRLNVALTRAKYG+I++G+ K L LW L + +K +
Sbjct: 1044 SNAKGVIGFLRDERRLNVALTRAKYGLIMVGDRKCLQNGDKLWKEYLQYLDSKKAI 1099
>gi|6321024|ref|NP_011103.1| Ecm32p [Saccharomyces cerevisiae S288c]
gi|418429|sp|P32644.1|ECM32_YEAST RecName: Full=Putative ATP-dependent RNA helicase ECM32; AltName:
Full=DNA helicase B; Short=Hcs B; AltName: Full=DNA
helicase III; AltName: Full=Extracellular mutant protein
32; AltName: Full=Helicase 1; Short=scHelI; AltName:
Full=Modulator of translation termination protein 1
gi|603417|gb|AAB64703.1| Yer176wp [Saccharomyces cerevisiae]
gi|285811811|tpg|DAA07839.1| TPA: Ecm32p [Saccharomyces cerevisiae S288c]
gi|392299881|gb|EIW10973.1| Ecm32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1121
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 267/510 (52%), Gaps = 78/510 (15%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 627 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 681
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E + D P+
Sbjct: 682 EIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLG 741
Query: 592 FLALHNQI-RNMEMNSELKKLLQLKEETGEL-SSADEKRYRMLKKNAEKSLLDNADVICC 649
+ LHN + +N+ S +++ K GE+ S +++ ++ K ++ + +I
Sbjct: 742 EICLHNIVYKNL---SPDMQVVANKTRRGEMISKSEDTKFYKEKNRVTNKVVSQSQIIFT 798
Query: 650 TCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL
Sbjct: 799 TNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIP 858
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+ L SLFER++ G P L+ QYRMHP++S+FP Y G L++GV DE+K
Sbjct: 859 Q-----LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGV-TDEQK 912
Query: 766 LSKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
WP P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 913 ------AWPGVQHPLFFYQCDLGPESRVRSTQRDIV--GFTYENKHECVEIVKIIQILML 964
Query: 817 CGMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE------------- 856
P E+IGVITPY QR L + + P +I Y EIE
Sbjct: 965 DKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGS 1024
Query: 857 -------------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G
Sbjct: 1025 LQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHG 1084
Query: 904 IIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
+IV+GN VL K PLW + + + +EQ+V+
Sbjct: 1085 LIVVGNKNVLRKGDPLWKDYITYLEEQEVI 1114
>gi|256271315|gb|EEU06385.1| Ecm32p [Saccharomyces cerevisiae JAY291]
Length = 1121
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 267/510 (52%), Gaps = 78/510 (15%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 627 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 681
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E + D P+
Sbjct: 682 EIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLG 741
Query: 592 FLALHNQI-RNMEMNSELKKLLQLKEETGEL-SSADEKRYRMLKKNAEKSLLDNADVICC 649
+ LHN + +N+ S +++ K GE+ S +++ ++ K ++ + +I
Sbjct: 742 EICLHNIVYKNL---SPDMQVVANKTRRGEMISKSEDTKFYKEKNRVTNKVVSQSQIIFT 798
Query: 650 TCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL
Sbjct: 799 TNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIP 858
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+ L SLFER++ G P L+ QYRMHP++S+FP Y G L++GV DE+K
Sbjct: 859 Q-----LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGV-TDEQK 912
Query: 766 LSKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
WP P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 913 ------AWPGVQHPLFFYQCDLGPESRVRSTQRDIV--GFTYENKHECVEIVKIIQILML 964
Query: 817 CGMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE------------- 856
P E+IGVITPY QR L + + P +I Y EIE
Sbjct: 965 DKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGS 1024
Query: 857 -------------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G
Sbjct: 1025 LQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHG 1084
Query: 904 IIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
+IV+GN VL K PLW + + + +EQ+V+
Sbjct: 1085 LIVVGNKNVLRKGDPLWKDYITYLEEQEVI 1114
>gi|448115785|ref|XP_004202904.1| Piso0_001771 [Millerozyma farinosa CBS 7064]
gi|359383772|emb|CCE79688.1| Piso0_001771 [Millerozyma farinosa CBS 7064]
Length = 1096
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 265/492 (53%), Gaps = 63/492 (12%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + + +++FR ++ + LN+SQ AV+ + ++++QGPPG+GKT T
Sbjct: 608 LLGKDPIKQIVFRNYVKYSRDS-----LNQSQKVAVQSVLNNSITVLQGPPGSGKTSTIF 662
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKIH-RTGLKVVRVCAKSREA---IDSPVSF 592
I+ QL+ + P+LV A SNIA+D + EK+ L ++R+ A +E D +
Sbjct: 663 EIILQLLDNLNTYPILVVAASNIAIDNIAEKLMGNHALSILRIVANDKEKEYNRDHYLGS 722
Query: 593 LALHNQIRNMEMNSELKKLL-QLKEETGELSSADEKRYRMLKKNAEKS--LLDNADVICC 649
+ LH+++ + ++ +K+++ LK L S ++ + ++L + S + A VI
Sbjct: 723 ICLHHKVYD-SLSLYMKEIMDNLKNGRSHLVSQNQYK-KLLAEQIRLSDMFIAQAKVIFT 780
Query: 650 TCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T V AG +L +K +++DE+ Q++EP ++P+ + G + + VGD QL
Sbjct: 781 TTVVAGGNQLKSVKKLPVVIMDEATQSSEPTTLIPLSMPGVDKFVFVGDQKQLSSFSQV- 839
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
LS SLFER+++ G P L+ QYRMHP +S+FP FY G L++G+ AD+RK
Sbjct: 840 ----PNLSLSLFERVLLNGTYKSPHMLDTQYRMHPLISEFPRKRFYGGLLKDGITADDRK 895
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIA--------GSGTSYVNRTEASNVEKITTRFI-R 816
+ + P+ P+ F+ T G+ + G +YVN+ E ++++ I
Sbjct: 896 MDGL------PENPVYFWDTAGKCRESRIKVGFREDRGFTYVNKPEVDLIKQVVINLIYE 949
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQY---------------------QGSLPAKIY--Q 853
+K IGVITPY GQR + + + P I+
Sbjct: 950 HNVKRSDIGVITPYRGQRDLISSELVKDTLVNPENKELYVEVDRDDIDNDAKPVTIHMVS 1009
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+I +AS+DAFQGREK+ ++MSCVRSN +GFL+D RRLNVALTRAK+G+++ G+ L
Sbjct: 1010 DIMIASIDAFQGREKNFMVMSCVRSNTENKVGFLSDERRLNVALTRAKFGLVLAGDKTCL 1069
Query: 914 SKQPLWNNLLNF 925
P+W+ +++
Sbjct: 1070 KSSPVWDEYISY 1081
>gi|323337865|gb|EGA79105.1| Ecm32p [Saccharomyces cerevisiae Vin13]
Length = 842
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 266/510 (52%), Gaps = 78/510 (15%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 348 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 402
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E + D P+
Sbjct: 403 EIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLG 462
Query: 592 FLALHNQI-RNMEMNSELKKLLQLKEETGEL-SSADEKRYRMLKKNAEKSLLDNADVICC 649
+ LHN + +N+ S +++ K GE+ S +++ ++ K ++ + +I
Sbjct: 463 EICLHNIVYKNL---SPDMQVVANKTRRGEMISKSEDTKFYKEKNRVTNKVVSQSQIIFT 519
Query: 650 TCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL
Sbjct: 520 TNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIP 579
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+ L SLFER++ G P L+ QYRMHP++S+FP Y G L++GV DE+K
Sbjct: 580 Q-----LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGVT-DEQK 633
Query: 766 LSKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
WP P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 634 ------AWPGVQHPLFFYQCDLGPESRVRSTQRDIV--GFTYENKHECVEIVKIIQILML 685
Query: 817 CGMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE------------- 856
P E+IGVITPY QR L + + P +I Y EIE
Sbjct: 686 DKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGS 745
Query: 857 -------------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G
Sbjct: 746 LQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHG 805
Query: 904 IIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
+IV+GN VL K PLW + + + +EQ V+
Sbjct: 806 LIVVGNKNVLRKGDPLWKDYITYLEEQDVI 835
>gi|151944894|gb|EDN63153.1| DNA helicase [Saccharomyces cerevisiae YJM789]
Length = 1121
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 266/510 (52%), Gaps = 78/510 (15%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 627 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 681
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E + D P+
Sbjct: 682 EIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLG 741
Query: 592 FLALHNQI-RNMEMNSELKKLLQLKEETGEL-SSADEKRYRMLKKNAEKSLLDNADVICC 649
+ LHN + +N+ S +++ K GE+ S +++ ++ K ++ + +I
Sbjct: 742 EICLHNIVYKNL---SPDMQVVANKTRRGEMISKSEDTKFYKEKNRVTNKVVSQSQIIFT 798
Query: 650 TCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL
Sbjct: 799 TNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIP 858
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+ L SLFER++ G P L+ QYRMHP++S+FP Y G L++GV DE+K
Sbjct: 859 Q-----LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGV-TDEQK 912
Query: 766 LSKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
WP P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 913 ------AWPGVQHPLFFYQCDLGPESRVRSTQRDIV--GFTYENKHECVEIVKIIQILML 964
Query: 817 CGMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE------------- 856
P E+IGVITPY QR L + + P +I Y EIE
Sbjct: 965 DKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAGGSQGTAGS 1024
Query: 857 -------------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G
Sbjct: 1025 LQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHG 1084
Query: 904 IIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
+IV+GN VL K PLW + + + +EQ V+
Sbjct: 1085 LIVVGNKNVLRKGDPLWKDYITYLEEQDVI 1114
>gi|255718735|ref|XP_002555648.1| KLTH0G14190p [Lachancea thermotolerans]
gi|238937032|emb|CAR25211.1| KLTH0G14190p [Lachancea thermotolerans CBS 6340]
Length = 1083
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 256/481 (53%), Gaps = 64/481 (13%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
N SQ A++H + ++++QGPPGTGKT T I+ QL++ + P+L A SNIA+D
Sbjct: 611 FNESQKAAIQHVLNNSITVLQGPPGTGKTSTIEEIILQLIENFHTLPILCVAASNIAIDN 670
Query: 564 LTEKI--HRTGLKVVRVCAKSREAIDSPVSFLA---LHNQIRNMEMNSELK-KLLQLKEE 617
+ EK +R +K++R+ ++S+E+ +P L LHN I ++ +++K + +L+
Sbjct: 671 IAEKFMENRPDIKILRIVSQSKESQYNPKHMLGKICLHN-IVYEQLPADMKDNISKLRSG 729
Query: 618 TGELSSADEKRYRMLKKNA-EKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQA 675
L S ++ + +NA + A +I T + +G +L I+ ++++DES Q+
Sbjct: 730 VPGLVSKNQYNKLLSTQNAISDRYIAQAQIIFTTNIASGGRQLKAIRELPAVIMDESTQS 789
Query: 676 TEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRL 732
+E +VP+ L G K+ + VGD QL + L SLFER++ G +P L
Sbjct: 790 SEVSTLVPLSLPGIKRFVFVGDEKQLSSFSNVPQ-----LEMSLFERILTNGTYEKPHML 844
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQE-- 789
+ QYRMHP +S+FP FYEG L++GV A+++K WP P+ FY QG E
Sbjct: 845 DTQYRMHPAISEFPIAKFYEGKLKDGVTAEDKK-------WPGISYPLFFYQCNQGSENK 897
Query: 790 ----EIAGSGTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLV------ 838
+ G +Y N EA + + + I G+K ++IGVITPY QR +
Sbjct: 898 VFNSKRGMRGFTYNNAHEAEYILAVLHKLILEKGVKTDEIGVITPYSSQRDLISEMLVKD 957
Query: 839 -----------QHMQYQGSLPA-------------KIYQEIEVASVDAFQGREKDLIIMS 874
Q M +L I + VA+VD+FQG EK ++ S
Sbjct: 958 PIVNPSGKAMEQEMDKDDALGGGESVSGSANKVTINIVNGVYVATVDSFQGHEKSFVLFS 1017
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVLV 933
CVR+N IGF+ D RR+NVALTRAK G++V+GN V+ K LW + +N+ +E++V+
Sbjct: 1018 CVRNNSENKIGFVKDRRRMNVALTRAKNGLVVVGNKDVMKKGDQLWADYINYLEEKEVIF 1077
Query: 934 E 934
E
Sbjct: 1078 E 1078
>gi|444320685|ref|XP_004180999.1| hypothetical protein TBLA_0E04260 [Tetrapisispora blattae CBS 6284]
gi|387514042|emb|CCH61480.1| hypothetical protein TBLA_0E04260 [Tetrapisispora blattae CBS 6284]
Length = 1202
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/519 (31%), Positives = 269/519 (51%), Gaps = 75/519 (14%)
Query: 472 SAYIYHRLLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGT 530
+A + +LG N + ++ F + H S N SQ A++H + ++++QGPPGT
Sbjct: 700 NANFINLILGKNPIKQIEFHNRIQFHKST-----FNESQKAAIQHVLNNDITIVQGPPGT 754
Query: 531 GKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQLTEK-IHRTGLKVVRVCAKSREA--- 585
GKT T I+ Q++K S P+LV A SNIA+D + EK + + ++++R+ ++++E+
Sbjct: 755 GKTSTIEEIILQMIKNFNSFPILVVAASNIAIDNIAEKFVKNSNIRILRIVSEAKESEYN 814
Query: 586 IDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRML---KKNAEKSLLD 642
+ P++ + LH+ + + + L L +LK G SS +K Y L K +
Sbjct: 815 KEHPLAPICLHHIVYDQLPENALNTLSKLK--NGLFSSISKKEYNKLSDIKNGISDRYVS 872
Query: 643 NADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQL 700
A +I T + AG L +K +++DES Q++E +VP+ L G + + VGD QL
Sbjct: 873 QAQIIFTTNIAAGGRSLKGLKELPVVIMDESTQSSEAATLVPLSLPGIRTFVFVGDEKQL 932
Query: 701 GPVVMCKKAARAGLSQSLFERLVVLG--IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
+ L SLFER+++ G +P L+ Q+RMHP +S+FP FY G L++G
Sbjct: 933 STFSNVPQ-----LEMSLFERVLLNGRYAKPHMLDTQFRMHPTISEFPIKTFYNGELKDG 987
Query: 759 VCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAG------SGTSYVNRTEASNVEKIT 811
+ +R + I++ P+ FY V +G EE SG +Y NR EA + K+
Sbjct: 988 ITPQDRYIEGINY-------PLYFYDVYKGGEEKVFHTQNGISGFTYTNRHEAKEIVKVL 1040
Query: 812 TRFI-RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL----------------------- 847
+ I ++ ++I +ITPY QR L+ + + L
Sbjct: 1041 YKLILDKKIQRKEISIITPYSAQRD-LISDILAEDLLINPQSLSIIRDVDEVDLLNNKNN 1099
Query: 848 ----------PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
I I VA++D+FQG E + II SCVR+N + IGFLND RRLNVAL
Sbjct: 1100 SSLNNESRKKTINIINGIYVATIDSFQGHENNFIIFSCVRNNPEKRIGFLNDRRRLNVAL 1159
Query: 898 TRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVLVEG 935
TRA+ G+I+IGN +VLS LW + + + + +K++ +
Sbjct: 1160 TRARNGLIMIGNSRVLSSGGSLWRSYIKYIERKKLIFKS 1198
>gi|190405732|gb|EDV08999.1| DNA helicase I [Saccharomyces cerevisiae RM11-1a]
gi|259146106|emb|CAY79366.1| Ecm32p [Saccharomyces cerevisiae EC1118]
Length = 1121
Score = 239 bits (610), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 266/510 (52%), Gaps = 78/510 (15%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 627 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 681
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E + D P+
Sbjct: 682 EIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLG 741
Query: 592 FLALHNQI-RNMEMNSELKKLLQLKEETGEL-SSADEKRYRMLKKNAEKSLLDNADVICC 649
+ LHN + +N+ S +++ K GE+ S +++ ++ K ++ + +I
Sbjct: 742 EICLHNIVYKNL---SPDMQVVANKTRRGEMISKSEDTKFYKEKNRVTNKVVSQSQIIFT 798
Query: 650 TCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL
Sbjct: 799 TNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIP 858
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+ L SLFER++ G P L+ QYRMHP++S+FP Y G L++GV DE+K
Sbjct: 859 Q-----LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGV-TDEQK 912
Query: 766 LSKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
WP P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 913 ------AWPGVQHPLFFYQCDLGPESRVRSTQRDIV--GFTYENKHECVEIVKIIQILML 964
Query: 817 CGMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE------------- 856
P E+IGVITPY QR L + + P +I Y EIE
Sbjct: 965 DKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGS 1024
Query: 857 -------------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G
Sbjct: 1025 LQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHG 1084
Query: 904 IIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
+IV+GN VL K PLW + + + +EQ V+
Sbjct: 1085 LIVVGNKNVLRKGDPLWKDYITYLEEQDVI 1114
>gi|349577838|dbj|GAA23006.1| K7_Ecm32p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1121
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 180/510 (35%), Positives = 266/510 (52%), Gaps = 78/510 (15%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 627 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 681
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E + D P+
Sbjct: 682 EIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLG 741
Query: 592 FLALHNQI-RNMEMNSELKKLLQLKEETGEL-SSADEKRYRMLKKNAEKSLLDNADVICC 649
+ LHN + +N+ S +++ + GE+ S +++ ++ K ++ + +I
Sbjct: 742 EICLHNIVYKNL---SPDMQVVANRTRRGEMISKSEDTKFYKEKNRITNKVVSQSQIIFT 798
Query: 650 TCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL
Sbjct: 799 TNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIP 858
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+ L SLFER++ G P L+ QYRMHP++S+FP Y G L++GV DE+K
Sbjct: 859 Q-----LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGV-TDEQK 912
Query: 766 LSKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
WP P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 913 ------AWPGVQHPLFFYQCDLGPESRVRSTQRDIV--GFTYENKHECVEIVKIIQILML 964
Query: 817 CGMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE------------- 856
P E+IGVITPY QR L + + P +I Y EIE
Sbjct: 965 DKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGS 1024
Query: 857 -------------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G
Sbjct: 1025 LQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHG 1084
Query: 904 IIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
+IV+GN VL K PLW + + + +EQ V+
Sbjct: 1085 LIVVGNKNVLRKGDPLWKDYITYLEEQDVI 1114
>gi|154419455|ref|XP_001582744.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121916981|gb|EAY21758.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 481
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 231/445 (51%), Gaps = 34/445 (7%)
Query: 517 IQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV 576
+ + + IQGPPGTGKT T I + PVL+ SN+ D +++ + V
Sbjct: 11 LSQKFTFIQGPPGTGKTRTIVAITKSFIDAGIKPVLIVGHSNLTADFCCQELRHINVGRV 70
Query: 577 R--------VCAKSREA---IDSPV-----SFLALHNQIRNMEMNSELKKLLQLKEETGE 620
V AK+ E D P+ S ++H + + N E G
Sbjct: 71 LSLQIEDAIVAAKANEIDSEYDHPIPGFNRSDYSIHRKAVDAYNNKN-------GIEAGT 123
Query: 621 LSSADE-KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL-----LKIKFHSILIDESMQ 674
+ K YR L K+ E+ L+ + D IC T +G RL K++F ++ DE+ Q
Sbjct: 124 YPNMRRMKVYREL-KDIEQKLIMDKDAICVTSSTSGAARLDTLKNTKLRFPVVIFDEAGQ 182
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEV 734
+P+ ++ + +++ILVGD QLGP+++ + A + GL ++ +L+ I P L
Sbjct: 183 CIDPDFLISLCHFPERMILVGDTFQLGPLILNRSAEQCGLGVNILTKLLKQEIAPNLLVH 242
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID---FPWPVPDKPMLFYVTQGQEEI 791
QYRMHP L +FPS +FY +++G+ AD R + F +P P+KP++F+ G+E +
Sbjct: 243 QYRMHPALLEFPSKYFYHDLVKSGIKADARIFAYPKGKMFKFPNPEKPLMFWDVDGKESV 302
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA-K 850
G S+VN +A V K G+ PE IG+IT Y GQ FL+ ++ S+ K
Sbjct: 303 GSDGNSFVNLVQADAVSKALDALHEAGIPPESIGIITAYNGQNDFLMDNLGEICSVCGEK 362
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
+E+A+VD FQGREKD II + VRSN IGFL RLNV++TRA+YG+IVIG+
Sbjct: 363 FINRVEIATVDGFQGREKDFIIFNLVRSNPDFNIGFLVRKERLNVSITRARYGLIVIGSA 422
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEG 935
+ S ++ + + ++ + + G
Sbjct: 423 RTFSGCQMYCDWMKYFVDNNCFIRG 447
>gi|366990359|ref|XP_003674947.1| hypothetical protein NCAS_0B04910 [Naumovozyma castellii CBS 4309]
gi|342300811|emb|CCC68575.1| hypothetical protein NCAS_0B04910 [Naumovozyma castellii CBS 4309]
Length = 1176
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/482 (33%), Positives = 246/482 (51%), Gaps = 61/482 (12%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNI 559
N LN SQ AV+H + +++IQGPPGTGKT T ++ QL++ S P+L A SNI
Sbjct: 703 NRDTLNESQRKAVQHVLNNRITVIQGPPGTGKTSTIEEVILQLIENFHSFPILCVAASNI 762
Query: 560 AVDQLTEKI--HRTGLKVVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQ- 613
A+D + EKI R +K +R+ + +E+ D P+ + LHN + + ++ E++++
Sbjct: 763 AIDNIAEKIIETRPNIKSLRILSDKKESQYGPDHPLGKICLHNMVYD-RLSPEMREIASK 821
Query: 614 -LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDE 671
+ GE+S + ++ N L+ A ++ T + AG +L IK +++DE
Sbjct: 822 LRSDRRGEVSRNQDNKFYTETTNISNKLIAQAQILFTTNITAGGRQLKVIKELPVVIMDE 881
Query: 672 SMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--R 728
S Q++E +VP+ L G K + VGD QL + L SLFER++ G
Sbjct: 882 STQSSEASTLVPLSLPGIKNFVFVGDEKQLSSFSNIPQ-----LEMSLFERILANGSYRE 936
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQG 787
P L+ QYRMHP +S FP FY G L++GV A+ + I + P+ FY +G
Sbjct: 937 PNMLDTQYRMHPRISDFPIKKFYHGKLKDGVTAENKMWDGIQY-------PLFFYQCDKG 989
Query: 788 QE------EIAGSGTSYVNRTEASNVEKITTR-FIRCGMKPEQIGVITPYEGQRAFLVQH 840
E + +Y N E + K+ + ++ +K E IG+ITPY QR L Q
Sbjct: 990 PEGRVVNNQNGMRAFTYNNIFECQEIIKLVYKLYLEKNVKLEDIGIITPYSSQRDLLSQM 1049
Query: 841 MQYQG---------------------------SLPAKIYQEIEVASVDAFQGREKDLIIM 873
S I + VA+VD+FQG EK+ II
Sbjct: 1050 FVKDAVVNPLGKGMLQETDEAEFLNSRRNDIQSHTVNIINGLHVATVDSFQGHEKNFIIF 1109
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
SCVR+N IGFL D RRLNVALTRAK G+IV+GN +VL + LW + + + +EQ+V+
Sbjct: 1110 SCVRNNAENKIGFLRDRRRLNVALTRAKNGLIVVGNKEVLKRGDHLWRDFVQYLEEQEVV 1169
Query: 933 VE 934
+
Sbjct: 1170 FD 1171
>gi|406836754|ref|ZP_11096348.1| AAA ATPase [Schlesneria paludicola DSM 18645]
Length = 628
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/519 (32%), Positives = 256/519 (49%), Gaps = 55/519 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA-PN 501
+ +D + +R + ALR+ D+ + + +LG P F A P+
Sbjct: 123 YRLDMAADDVARERQRSALRRIGEIDRGRALRLKQAVLGKE----------PPEFDAVPD 172
Query: 502 ---LPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
L L+ SQ AV HA+ + L++I GPPGTGKT T ++ Q V++ G VL CA S
Sbjct: 173 WSPLAQLDESQQAAVSHALSAQHLAVIHGPPGTGKTTTVVELIRQAVRR-GEKVLACAAS 231
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR-------EAID-----SPVSFLALHNQIRNMEMN 605
N+AVD L E++ +V+R+ +R +D P LA +
Sbjct: 232 NLAVDNLLERLVIARERVIRIGHPARVLPELREHTLDVMVESHPDLKLAREWTKEAWSLR 291
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAE------KSLLDNADVICCTCVGAGDPRL 659
+ K + G A ++ R+L+ E + LLD+A V+C T G D L
Sbjct: 292 RQAGKFTRTAPPPGARRDARDEAKRLLRDARELESRLVEYLLDSAQVVCATLTGLNDEIL 351
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ +F ++IDE+ Q+TEP C +P +L +K+L+L GDHCQL P ++ A R G S+
Sbjct: 352 GERQFDLVVIDEAAQSTEPPCWIP-LLRSKRLVLAGDHCQLPPTIISHDARREGFQVSMM 410
Query: 720 ERLVVL--GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP----W 773
ERLV + RL+ QYRMH + +F S+ FY+ SL + +L+ D P
Sbjct: 411 ERLVSRWGDLIARRLDTQYRMHDRIMQFSSDEFYDSSLISANSVRAHRLA--DLPHVTDG 468
Query: 774 PVPDKPMLFYVTQGQ---EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
+ + F+ T G E+ G S N EA V + G++P +I VITPY
Sbjct: 469 ELTQSSIRFFDTAGSDCVEQAEVEGESRTNPGEAEFVVIKVNELLAAGVRPTEIAVITPY 528
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L + G +E+ +VD FQGREK+ +++S VRSN +GFL D
Sbjct: 529 SAQARLLRTLIAEAG---------VEIDTVDGFQGREKEAVVISLVRSNAKGELGFLTDT 579
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
RR+NVALTRA+ ++V G+ L+ + +LN+++ Q
Sbjct: 580 RRMNVALTRARRHLMVFGDSATLANHEFYLRMLNYFERQ 618
>gi|207345778|gb|EDZ72487.1| YER176Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 687
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 266/510 (52%), Gaps = 78/510 (15%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 193 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 247
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E + D P+
Sbjct: 248 EIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLG 307
Query: 592 FLALHNQI-RNMEMNSELKKLLQLKEETGEL-SSADEKRYRMLKKNAEKSLLDNADVICC 649
+ LHN + +N+ S +++ K GE+ S +++ ++ K ++ + +I
Sbjct: 308 EICLHNIVYKNL---SPDMQVVANKTRRGEMISKSEDTKFYKEKNRVTNKVVSQSQIIFT 364
Query: 650 TCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL
Sbjct: 365 TNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIP 424
Query: 708 KAARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+ L SLFER++ G P L+ QYRMHP++S+FP Y G L++GV DE+K
Sbjct: 425 Q-----LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGV-TDEQK 478
Query: 766 LSKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
WP P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 479 ------AWPGVQHPLFFYQCDLGPESRVRSTQRDIV--GFTYENKHECVEIVKIIQILML 530
Query: 817 CGMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE------------- 856
P E+IGVITPY QR L + + P +I Y EIE
Sbjct: 531 DKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGSQGTAGS 590
Query: 857 -------------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G
Sbjct: 591 LQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKIGFLRDKRRLNVALTRAKHG 650
Query: 904 IIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
+IV+GN VL K PLW + + + +EQ V+
Sbjct: 651 LIVVGNKNVLRKGDPLWKDYITYLEEQDVI 680
>gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]
gi|2984278|gb|AAC07803.1| DNA helicase [Aquifex aeolicus VF5]
Length = 530
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 254/507 (50%), Gaps = 87/507 (17%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTG 548
+ H+ + LN Q AV+ A++ + LI GPPGTGKT T + +L Q G
Sbjct: 34 KGHISVLVYKSGMTKLNAYQKKAVERALKAEKVFLIHGPPGTGKTTTLVECIKRLA-QEG 92
Query: 549 SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC-------AKSREAIDSPVSFLALHNQIRN 601
VL A SN+AVD L E++ R +KVVRV R +D V F ++ R
Sbjct: 93 YKVLATADSNVAVDNLVERLVRENVKVVRVGNPVRVLKTIQRHTLDYLVQFEPEFDKARK 152
Query: 602 MEMNSELKKLLQLKEETGELSSADEKRYR-------MLKK-------------------- 634
+ +++ LKEE + E RYR +LK+
Sbjct: 153 I-----YEEIDNLKEEQKKYVKP-EPRYRRGLSDEEILKRAKTGTPVRGLSPKILRSMAK 206
Query: 635 --------------------NAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
A +L A V+C T AG L + F ++IDE+ Q
Sbjct: 207 WIKLQEKVKELYEKAKKEEEKAVNKILSRAQVVCTTNSTAGSEVLQNLNFDVVIIDEATQ 266
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-L 732
ATEP C++P+I G K+LI+ GDH QL P V+ ++A A LS +LFERL+ L G + L
Sbjct: 267 ATEPSCLIPLIKG-KKLIMAGDHKQLPPTVLSQEAQEA-LSYTLFERLLDLYGEEIYEIL 324
Query: 733 EVQYRMHPELSKFPSNFFYEG------SLQNGVCAD---ERKLSKIDFPWPV---PDKPM 780
+QYRM+ ++ +F + FYEG S++N D KL +I P+ P+K +
Sbjct: 325 RIQYRMNKKIMEFSNKMFYEGKLIADKSVENHTIKDLINPEKLKEIPEPFKSVLEPEKVV 384
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
+F +G+E+ TS+ N EA KI ++ G++ E IGVI+PYE Q FL +
Sbjct: 385 VFINVRGKEKQRRGSTSFYNEEEAKVAVKIVEYLMKIGLRSEHIGVISPYEDQVNFLEEL 444
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
++ E+EV +VD FQGREK++II+S VRSN+ IGFL D RRLNVALTRA
Sbjct: 445 LKDF---------EVEVKTVDGFQGREKEVIIISFVRSNEKGEIGFLKDYRRLNVALTRA 495
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+ +I +GN K LS ++ + + K
Sbjct: 496 RRKLITLGNEKTLSSDEVYKQFIGYVK 522
>gi|255533226|ref|YP_003093598.1| DEAD/DEAH box helicase [Pedobacter heparinus DSM 2366]
gi|255346210|gb|ACU05536.1| DEAD-like helicase [Pedobacter heparinus DSM 2366]
Length = 636
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 274/523 (52%), Gaps = 50/523 (9%)
Query: 436 PTEATTG-FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR---C 491
P A G +D ++ S+D MQ A+++ +V ++ + ++L +D+ F
Sbjct: 114 PDWARNGKLGIDVLFDDHSYDEMQAAVKRASVQNEQADNHHLIKILT-GIDKPSFAEDVV 172
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
H P + LN+ Q AV H + + L+++ GPPGTGKT T V ++KQ G
Sbjct: 173 HYP-------VAKLNKVQQLAVYHIVAAQQLAIVHGPPGTGKTTTLVQAVKTMIKQHGRQ 225
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREA-------IDSPVSFLALHNQIRNME 603
+LV APSN AVD L+EK+ GL V+R+ R + +DS +S A ++++++
Sbjct: 226 ILVVAPSNTAVDLLSEKLADEGLNVLRIGNPVRVSEKLFSLTLDSKMSAHASIKEVKDLK 285
Query: 604 MNS-ELKKLLQL------KEETGELSSADEKRYRMLKKNAE------KSLLDNADVICCT 650
+ E KK+ + E + + ++ ++++K A + L+ A V+ T
Sbjct: 286 KQAAEYKKMAHKYKRNFGRAEKEQRKALFDEAHKLMKAVAGAEQYIIEDLIGKAQVVTAT 345
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
VGA + KF +++IDE+ QA EP C +P IL A+++IL GDHCQL P + AA
Sbjct: 346 LVGANHYTIKDRKFDTVVIDEAGQALEPACWIP-ILKAQKVILAGDHCQLPPTIKSNDAA 404
Query: 711 RAGLSQSLFERLVVLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
+AGLS +L E+ + L LE QYRMH ++ + S FYEG L+ L
Sbjct: 405 KAGLSTTLLEKCIALHPNAVVLLEEQYRMHTQIMAYSSKVFYEGKLKAHAAVAGHLL--- 461
Query: 770 DFPWPVPDKPMLFYVTQG-QEEIAGSGTSYVNRTEASNVEKITTRFI------RCGMKPE 822
FP D + F T G E GTS N EA + K T+ +
Sbjct: 462 -FPG---DTALNFIDTAGCGFEEQREGTSIYNSEEAVFLLKHLTQLVLKLAEVYVAENFP 517
Query: 823 QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
IGVI+PY+ Q+ ++++ + + ++I V ++D+FQG+E+D++ + RSN+
Sbjct: 518 SIGVISPYK-QQIYILKDLLLNHPVLQLYIEKISVNTIDSFQGQERDIVYIGMTRSNNEG 576
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
IGFL+D RR+NVA+TRA+ ++VIG+ LS+ P +++ + +
Sbjct: 577 VIGFLSDIRRMNVAMTRARKKLVVIGDSATLSRLPFYSDFIAY 619
>gi|410076224|ref|XP_003955694.1| hypothetical protein KAFR_0B02620 [Kazachstania africana CBS 2517]
gi|372462277|emb|CCF56559.1| hypothetical protein KAFR_0B02620 [Kazachstania africana CBS 2517]
Length = 1164
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 256/488 (52%), Gaps = 69/488 (14%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
N SQ+ A++ + +++IQGPPGTGKT T I+ QL+ S P+L A SNIA+D
Sbjct: 693 FNISQMDAIEQVLNNRVTVIQGPPGTGKTSTIEEIILQLISSFHSFPILCVAASNIAIDN 752
Query: 564 LTEKI--HRTGLKVVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
+ EKI R +K++R+ + +E+ ++ P+ + LHN + + +M ++K+L K +
Sbjct: 753 IAEKIMHSRPDIKILRILSDRKESEYNMEHPLGKICLHNIVYD-QMPPDMKELTD-KVRS 810
Query: 619 G---ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQ 674
G ELS ++ + K + A +I T + AG +L IK +++DES Q
Sbjct: 811 GRMQELSKREDSNLYIFKNKISNKNVSQAQIIFTTNITAGGRQLKAIKEVPVVIMDESTQ 870
Query: 675 ATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFR 731
++E +VP+ L G K + VGD QL + L SLFER+++ G P
Sbjct: 871 SSEASTLVPLSLPGIKSFVFVGDEKQLSSFSNVPQ-----LELSLFERVLLNGSYKSPIM 925
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEE 790
L+VQYRMHP++S+FP FY+ L++GV +++D WP P+ FY +G+E
Sbjct: 926 LDVQYRMHPKISEFPILKFYKNQLKDGV-------TEVDRAWPGITYPLFFYQCDRGKES 978
Query: 791 IAG------SGTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLV----- 838
+ S +Y+N+ E + KI + I + ++IG+ITPY QR L
Sbjct: 979 VTVNRRNNLSALTYINQYECQEIVKILYKLILEKNVSLDEIGIITPYSAQRDLLSKVLLE 1038
Query: 839 --------QHMQYQG----------------SLPAKIYQEIEVASVDAFQGREKDLIIMS 874
+ M+ Q S I + VA+VD+FQG EK+ II S
Sbjct: 1039 DDIINPEGKAMEQQNDEAEFLNKNNVDYSVQSHVVNIINGLHVATVDSFQGHEKNFIIFS 1098
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL-SKQPLWNNLLNFYKEQKVLV 933
CVR+N IGFL D RRLNVALTRA+ G+I++GN VL + LW + F +++ V+
Sbjct: 1099 CVRNNAENKIGFLRDERRLNVALTRARNGLIIVGNKHVLKAGDKLWREFVTFLEDKGVI- 1157
Query: 934 EGPLNNLK 941
NNL+
Sbjct: 1158 ---FNNLE 1162
>gi|440292088|gb|ELP85330.1| hypothetical protein EIN_085720 [Entamoeba invadens IP1]
Length = 1109
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 260/506 (51%), Gaps = 83/506 (16%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV--KQ-------T 547
FS L DLN SQ AV + SLI GPPGTGK+ + +V L+ KQ
Sbjct: 341 FSGRTL-DLNDSQKNAVLQGLNCNCSLIVGPPGTGKSTVAVALVQNLMVYKQHFVDGIDI 399
Query: 548 GSPVLVCAPSNIAVDQLTEKI------------------------HRTGL-KVVRVCAKS 582
+LV PSN AV+ L EK+ H+T + KV K+
Sbjct: 400 QQKILVSGPSNNAVNALCEKLIENDIECVRIVVDNKYTNMSTKVFHKTLMYKVYTFLLKT 459
Query: 583 REAID-----SPVSFLALH-------------NQIRNMEM----NSELKK-------LLQ 613
+ +D + FL + +++ ++E+ E+K+ LQ
Sbjct: 460 FQEVDDVNKINVRKFLDVFERKVQQFLTDSDKDKLASLELIYNTTPEIKRDFKTFNDFLQ 519
Query: 614 LKEE------TGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSI 667
+++ +G D++ R + KN + +L++ +V+C T ++ +KF
Sbjct: 520 TQDDALWNKVSGGADFNDDQIIRKIMKNYQDVILNDCEVVCATL----SKQISGVKFWCT 575
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
+ DE+ QA EPE + I K+++L+GD QL P V+ KA + GL S+FERL+ +
Sbjct: 576 IGDEASQALEPETL-KAINEVKKVVLIGDFNQLPPTVVTTKAKQGGLDLSMFERLIQNKV 634
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG 787
L VQYRMHP +S FPS FY+G+L +GV +R ++D +PV P++F +G
Sbjct: 635 FTTLLNVQYRMHPAISSFPSKNFYKGNLHDGVTEQQRSDPRLDHFFPVEHWPVVFIHHEG 694
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
+E + +G SY N E V + G + ++G+I+ Y Q + ++++ QG+
Sbjct: 695 KESVGENGASYYNVNEVGIVTAVIGELKNRGFQDRELGIISTYNSQIQLISENIEKQGN- 753
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
I+ +SVD+FQG EK++I++SCVRSN+ GIGF++D RR+NVALTRA+ G++V+
Sbjct: 754 -------IQTSSVDSFQGSEKEIIVLSCVRSNERLGIGFVSDHRRMNVALTRARKGLVVV 806
Query: 908 GNPKVLSKQPLWNNLLNFYKEQKVLV 933
GN + LS W L+ Y E++ +V
Sbjct: 807 GNMRTLSTDQNWRKLILTYGEKQCVV 832
>gi|428672356|gb|EKX73270.1| conserved hypothetical protein [Babesia equi]
Length = 1113
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 250/513 (48%), Gaps = 37/513 (7%)
Query: 428 ELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ---LALRKFAVDDQSVSAYIY----HRLL 480
+L S G ++ + V I ++ S++RM L+L + S AY Y +L
Sbjct: 583 KLIYSDGDECFSSENYGVVDITQTISYNRMMGALLSLSHSIIPITSTRAYTYTYEIRDIL 642
Query: 481 GHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV 540
H F K +S P L SQ A A+ ++LIQGPPGTGKT + I+
Sbjct: 643 LHKASYRTFED--TKLYSLPTPLSLTPSQTEACLSAVNNNITLIQGPPGTGKTHVACAII 700
Query: 541 YQLVK-QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI 599
+ +L + SN+A D L E + G+ +R+ + S + Q
Sbjct: 701 DSWRRLHPQERILAVSDSNVAADTLIEALSACGIPALRIGSGSEYDL-----------QE 749
Query: 600 RNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
++ S + L LK S K L+ + N +I TC+G+G L
Sbjct: 750 EGIKDLSRYQAYLYLK------SKHKYKEANSLRTVLFMEAIKNNKIIIATCIGSGSDLL 803
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
++F +++DE Q+ EP +V + G K L+L+GDH QL P ++ AR+GLS+SL
Sbjct: 804 DNLQFSFVIVDECAQSIEPANLVSIGRGCKSLVLIGDHKQLRPTIISNTVARSGLSKSLL 863
Query: 720 ERLVVLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
ERLV + P L Q RMHP +++F + FY G LQN D + F WPV
Sbjct: 864 ERLVDENVVPICLLNSQRRMHPTIAEFSNLHFYNGMLQNEDVDDINRPQIAGFKWPVAGY 923
Query: 779 PMLFY-VTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQ 833
+ F ++ G GTS N+ E + V I F+ G ++ QIG++TPY+ Q
Sbjct: 924 NLCFVDISTGTPYNNFETPYGTSKYNQVEVNCVISILRSFLAAGDIEERQIGILTPYDAQ 983
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
+ L + + AK I + SVD FQG+EKDLII S VRSN ++ IGFL DPRR+
Sbjct: 984 KNVLQNQVNLIQGINAK---AISIDSVDGFQGKEKDLIIFSAVRSNLNKDIGFLRDPRRM 1040
Query: 894 NVALTRAKYGIIVIGNPKVLSKQ-PLWNNLLNF 925
NV LTRA+ G+I+IG+ LS W LN+
Sbjct: 1041 NVMLTRARRGLIIIGDLFTLSNDFENWRQFLNW 1073
>gi|367015784|ref|XP_003682391.1| hypothetical protein TDEL_0F03690 [Torulaspora delbrueckii]
gi|359750053|emb|CCE93180.1| hypothetical protein TDEL_0F03690 [Torulaspora delbrueckii]
Length = 1082
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 257/480 (53%), Gaps = 63/480 (13%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
N SQ A++H + ++++QGPPGTGKT T I+ Q++K S P+L A SNIA+D
Sbjct: 611 FNDSQKSAIQHVLNNSVTILQGPPGTGKTSTIEEIILQMIKNFHSFPILCVAASNIAIDN 670
Query: 564 LTEK--IHRTGLKVVRVCAKSREAI---DSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
+ EK ++R +K++R+ ++ +EA + P+ + LHN + + +M ++K+ + K +
Sbjct: 671 IAEKFMVNRPDIKILRIVSEGKEAQYNNEHPLGKICLHNIVYD-QMPPDMKENI-AKLRS 728
Query: 619 GELSSADEKRYRML---KKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQ 674
G + ++ L + N + A ++ T + AG +L I+ +++DES Q
Sbjct: 729 GRSKDVSKNQFSKLLTQQNNISDRHVLQAQILFTTNIAAGGRQLKAIQELPVVIMDESTQ 788
Query: 675 ATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFR 731
++E +VP+ L G + + VGD QL + L SLFER+++ G +P
Sbjct: 789 SSEASTLVPLSLPGIRTFVFVGDEKQLSSFSNIPQ-----LEMSLFERVLLNGCYKKPHM 843
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE-- 789
L+ QYRMHP++S+FP FY+G L+NGV +++ I +P ++ +G E
Sbjct: 844 LDTQYRMHPQISEFPIKKFYQGELKNGVTEEQKSWESIKYPL------YYYHCNEGPESK 897
Query: 790 ----EIAGSGTSYVNRTEASNVEKITTRFIR-CGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
+ SG +Y NR E + K+ + I G+K +QIGVITPY QR + + +
Sbjct: 898 VFNRQRGMSGFTYNNRHECDAILKVIYKLIMDKGVKNDQIGVITPYSAQRDLISETLVND 957
Query: 845 GSL-PAKIYQEIE----------------------------VASVDAFQGREKDLIIMSC 875
+ PAKI E E VA++D+FQG EK+ +I SC
Sbjct: 958 DVVNPAKIAMEQELDEADLLDAGIGRSNGKKNTINIINGVYVATIDSFQGHEKEFVIFSC 1017
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVLVE 934
VR+N IGF +D +R+NVALTRAK G++++GN +V K LW + + + +E+ ++ +
Sbjct: 1018 VRNNKENRIGFASDKKRMNVALTRAKNGLVLVGNSEVFRKGDSLWKDYIEYLEEKSLIFQ 1077
>gi|392964636|ref|ZP_10330056.1| AAA ATPase [Fibrisoma limi BUZ 3]
gi|387846019|emb|CCH52102.1| AAA ATPase [Fibrisoma limi BUZ 3]
Length = 632
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 268/518 (51%), Gaps = 56/518 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEV--LFRCHLPKHFSAP 500
V+ ++ S+D M+ AL+ + ++S HRL+ E FR + +
Sbjct: 122 LGVELLFDDNSYDEMEQALKTAS----TLSRKSDHRLINILTGEQSPTFRSEV----AEL 173
Query: 501 NLPDLNRSQVYAV-KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
+LP LN SQV AV K L+++ GPPGTGKT T + L++Q VLV APSN
Sbjct: 174 SLPQLNPSQVAAVDKIRSANELAIVHGPPGTGKTTTIVQAIKALIRQANQKVLVVAPSNT 233
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L+E++H GL V+RV +R + + L L +++ E KKL + E
Sbjct: 234 AVDLLSERLHDQGLNVLRVGNPAR--VSERLMALTLDHKVNEHPYMKEAKKLKKQANEFR 291
Query: 620 ELSSADEKRY----------------RMLK--KNAEKSLLDN----ADVICCTCVGAGDP 657
++ ++++ R++K N+E+ ++D+ A VI T VGA
Sbjct: 292 NMAHKYKRQFGKAEREQRKALFDEAHRIMKDVANSEQYVIDDLIARAQVITATLVGANHH 351
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
+ + +H+++IDE+ QA EP C +P IL A++++L GDHCQL P + +AAR GLS++
Sbjct: 352 TVRNLTYHTVVIDEAGQALEPACWIP-ILKAQKVVLAGDHCQLPPTIKSPEAARRGLSET 410
Query: 718 LFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
L E+ + + L + QYRMH + + S FYE L+ L
Sbjct: 411 LLEKCIAMHPEAVSLLDEQYRMHEHIMGYSSEVFYEKKLKAHASVARHTLFD-------G 463
Query: 777 DKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQ---IGVI 827
D ++F T G E++ GTS N EA+ + K T+ + KP+ I VI
Sbjct: 464 DTSLVFVDTAGCGFDEKL--DGTSSTNPDEAALLVKHLTQLVADLSTYYKPQDFPTIAVI 521
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+PY+ Q A L + + L + I V ++D+FQG+E+D++ +S VRSN IGFL
Sbjct: 522 SPYKQQIAILKEQIANTPELQPYSHV-ISVNTIDSFQGQERDIVYISMVRSNADGDIGFL 580
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
D RR+NVA+TRA+ ++++G+ L+ P + + + +
Sbjct: 581 ADIRRMNVAMTRARKKLVIVGDSATLAGLPFYADFIAY 618
>gi|385800522|ref|YP_005836926.1| DNA helicase [Halanaerobium praevalens DSM 2228]
gi|309389886|gb|ADO77766.1| DNA helicase [Halanaerobium praevalens DSM 2228]
Length = 749
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 186/557 (33%), Positives = 266/557 (47%), Gaps = 92/557 (16%)
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
G +D TSF RM AL K + LL E L
Sbjct: 208 GVRLDLFVNDTSFQRMFSALEKIKHPANEIEKSKRDILLNRKKPEFKSEFDLE------- 260
Query: 502 LPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
+ + N SQ A+K+++Q + L LIQGPPGTGKT+T+ I+ Q VK G VL A SN A
Sbjct: 261 IENFNHSQKNAIKNSLQAKKLYLIQGPPGTGKTLTAVEIIQQAVK-NGDKVLATADSNTA 319
Query: 561 VDQLTEKIHRTGLKVV------RVCAKSRE-AIDSPV----SFLA---LHNQIRNM---- 602
VD L E + LKV+ RV K RE +D V +L L +Q+ ++
Sbjct: 320 VDNLLELLAANNLKVIRIGHPIRVNKKLREHTLDEIVLEHQDYLKAEKLRDQVSDLINKQ 379
Query: 603 ------------------------------------EMNSELKKLLQLKEETGELSSADE 626
E+ E+ ++L+E+ +
Sbjct: 380 EAYIYPSGKYRRGLSDQEIKNYAEKDLEKHVRGISPEVIEEMASWIELQEKIDKYF---- 435
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
K+ L+ A + L+ ADVIC T + AG L +F +IDE+ QAT+P ++P L
Sbjct: 436 KKIESLENKAVEELITAADVICTTNITAGAEILENQQFDLSIIDEATQATQPAALIPY-L 494
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSK 744
AK+ IL+GD QL P V+ ++AA+ GL SLFE+L+ F L++QYRMH ++
Sbjct: 495 KAKKTILIGDQQQLPPTVVNQEAAKNGLKISLFEKLIKTYQNDFSSLLKIQYRMHRKIMG 554
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWP----VPDK------PMLFYVTQ---GQEEI 791
F S +FY L+ + LS + F PDK PM+F T+ +E
Sbjct: 555 FSSIYFYNNYLKAADSVAKNTLSDLGFQLENKSCFPDKSLKAEYPMVFLDTKEMKAEERS 614
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI 851
SY N EA V + R ++ +K E+I VI Y+ Q F+ QH +++
Sbjct: 615 FAGSNSYDNPVEAEIVLDLLDRALKSSLKEEEIAVIAAYKDQVDFINQHNKFKN------ 668
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPK 911
+E+ +VDAFQGREK++II S VRSN IGFL D RRLNVALTRAK +I +G+
Sbjct: 669 ---VEIDTVDAFQGREKEMIIFSAVRSNQDNNIGFLRDLRRLNVALTRAKRKMIFVGDSS 725
Query: 912 VLSKQPLWNNLLNFYKE 928
+ K ++ LL + K+
Sbjct: 726 TICKYNVYEKLLKYIKK 742
>gi|254167906|ref|ZP_04874755.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289596630|ref|YP_003483326.1| DNA helicase [Aciduliprofundum boonei T469]
gi|197623197|gb|EDY35763.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289534417|gb|ADD08764.1| DNA helicase [Aciduliprofundum boonei T469]
Length = 655
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 181/558 (32%), Positives = 264/558 (47%), Gaps = 101/558 (18%)
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
+ G +D +F RM AL+ +++ I LLG+ E+ C +
Sbjct: 121 SRGVRIDLYANDITFQRMLSALQSLKDENKLRLRAI---LLGNANPEL---CKVGIKLEN 174
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
L + R AV+ I L LI GPPGTGKT T A + Q+VK+ G VL A SN+
Sbjct: 175 RRLNNFQRK---AVESLIGSELFLIHGPPGTGKTTTLAEGIIQMVKK-GYRVLATADSNV 230
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
AVD L EK+ + VVRV +R I+ + ++ + E KK +++ E
Sbjct: 231 AVDNLVEKLAHK-VNVVRVGHPARIGKSIIEHTLDYIVAQ--------DIEYKKAMEIWE 281
Query: 617 ETGELSSADEK-------------------------RYR-----MLKKNAE--------- 637
+ ++ + EK YR ++K A+
Sbjct: 282 KIDDMRAEQEKYKKPTPQWRRGMGDDEIVYLANASRSYRGVPVEIMKNMAQWIKIQRRIE 341
Query: 638 --------------KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
K +L NADVIC T AG L + F ++IDE+ Q+ EP C++P
Sbjct: 342 EYVKKAKKMEEKVIKRVLKNADVICTTNSTAGSELLYNMDFDFVVIDEATQSIEPSCLIP 401
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR-PFRLEVQYRMHPEL 742
+I G + I+ GDH QL P +M KA L +LFER + L L VQYRM+ ++
Sbjct: 402 MIKGDR-YIMAGDHRQLPPTIMSYKA--KALQLTLFERFIKLYPHLSITLRVQYRMNEKI 458
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM----------LFYVTQG-QEEI 791
KFPS FY+ L R + + ++PM +F Q +EE
Sbjct: 459 MKFPSKLFYKDLLIAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSIIVFLDMQNCKEEK 518
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI 851
G TSY N EA V+ ++ G+K + IG+ITPY+ Q L +
Sbjct: 519 RGGSTSYYNECEAETVKDTVDCLLKIGLKEKHIGIITPYDDQVDLL-----------RSM 567
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPK 911
++IE+ SVD FQGREKD+II+S VRSND IGFL+D RRLNVA+TRAK +I++GN K
Sbjct: 568 IEDIEIKSVDGFQGREKDVIIISFVRSNDKGDIGFLDDLRRLNVAITRAKRKLIMLGNAK 627
Query: 912 VLSKQPLWNNLLNFYKEQ 929
LS ++ L+++ + +
Sbjct: 628 TLSSNEVYTKLIDYTRSE 645
>gi|365760991|gb|EHN02669.1| Ecm32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1101
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 174/508 (34%), Positives = 264/508 (51%), Gaps = 75/508 (14%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ LNRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 608 LLGQKPIKEIYFDNRL--KFSSD---KLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 662
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + PVL A SNIA+D + EKI +R +K++R+ +K +E D P+
Sbjct: 663 EIIIQVIERFHAFPVLCVAASNIAIDNIAEKIMENRPQIKILRILSKRKEQQYGDDHPLG 722
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGE-LSSADEKRYRMLKKNAEKSLLDNADVICCT 650
+ LHN I + ++ ++ +++ K GE +S +++ ++ + ++ + +I T
Sbjct: 723 EICLHN-IVHKNLSPDM-RVVANKTRRGEVISKSEDTKFYKERNRITNKVVSQSQIIFTT 780
Query: 651 CVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKK 708
+ AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL +
Sbjct: 781 NIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIPQ 840
Query: 709 AARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
L SLFER++ G R L+ QYRMHP++S+FP Y G L++GV ++
Sbjct: 841 -----LETSLFERVLSNGTYKNRLMLDTQYRMHPKISEFPIKKIYNGELRDGVTGKQKG- 894
Query: 767 SKIDFPWPVPDKPMLFY---------VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
WP + P+ FY V Q +I G +Y N+ E + KI +
Sbjct: 895 ------WPGVEHPLFFYHCDLGSESRVRSAQRDIV--GFTYENKHECGEIVKIVQILLLD 946
Query: 818 GMKP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIE-------------- 856
P E+IG++TPY QR L + + P +I Y EIE
Sbjct: 947 KKVPLEEIGIVTPYSAQRDLLSNILTKNTVINPRQISMEQEYDEIELFNAADSQGASSLQ 1006
Query: 857 -----------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
VA+VD+FQG EK II SCVR+N IGFL D RRLNVALTRAK+G+I
Sbjct: 1007 NNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNAENKIGFLRDKRRLNVALTRAKHGLI 1066
Query: 906 VIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
V+GN VL K PLW + + + +EQ +
Sbjct: 1067 VVGNKDVLKKGDPLWRDYVTYLEEQDAI 1094
>gi|359405877|ref|ZP_09198604.1| putative DNA helicase [Prevotella stercorea DSM 18206]
gi|357557227|gb|EHJ38779.1| putative DNA helicase [Prevotella stercorea DSM 18206]
Length = 622
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 248/461 (53%), Gaps = 47/461 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F A +LP LN SQ AV ++ + ++++ GPPGTGKT T +Y+ +++ S VLVCA
Sbjct: 178 FGAMSLPWLNASQQQAVNEVLRAKDVAVVHGPPGTGKTTTLVEAIYETLRRE-SQVLVCA 236
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD + EK+ G+ V+R+ +R D +SF R E + + +L ++
Sbjct: 237 QSNMAVDWIAEKLVDRGVNVLRIGNPTR-VNDKMLSF----TYERRFEAHPDYPQLWSIR 291
Query: 616 EETGEL------SSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKI 662
+ EL S A ++ LK A + SL A VI CT GA + L
Sbjct: 292 KAIRELRGERRRSDAWHQKMDRLKSRATEIELRIRASLFGEARVIACTLTGAANRVLEGE 351
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
KF ++ IDE+ QA E C + I A ++I GDHCQL P V A + GL +L ER+
Sbjct: 352 KFSTLFIDEAAQALEAACWI-AIRRAGRVIFAGDHCQLPPTVKSIMALKGGLGITLMERI 410
Query: 723 V-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
V V+ + L+VQYRM+ ++ +F S++FY G +Q + R + +D+ D
Sbjct: 411 VKAKPDVVTL----LKVQYRMNEQIMRFSSDWFYGGEVQTAPGIERRSI--LDY-----D 459
Query: 778 KPMLFYVT---QGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--GVIT 828
+PM++ T +G+EE G +NRTEA ++ + F + G + E I G+I+
Sbjct: 460 RPMMWVDTSEAEGKEEFVGENFGRINRTEAELTLQTLQQYFEKIGKQRILDEHIDVGIIS 519
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY Q L+ M Q + I V +VD FQG+E+D+I++S VR+ND + IGFL
Sbjct: 520 PYRAQ-VQLLHKMIRQSEFFRPYRRAISVNTVDGFQGQERDIIVISLVRNNDGKEIGFLR 578
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
D RR+NVA+TRA+ +I++G+ ++ P + L + Q
Sbjct: 579 DLRRMNVAITRARMKLIILGSAATMTAHPFYKKLYEWISGQ 619
>gi|70934595|ref|XP_738502.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514772|emb|CAH87140.1| hypothetical protein PC302334.00.0 [Plasmodium chabaudi chabaudi]
Length = 348
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 203/382 (53%), Gaps = 90/382 (23%)
Query: 206 EQWKPLIADRSFLSWLVKVPTEQE-QQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGV 264
E+W+P+I DR FL WLV +PT++E +++G+ +TS + KLEE WK+ + +L+
Sbjct: 24 EKWQPIIEDRCFLEWLVNIPTKEEAEKKGKLITSVNVNKLEEFWKNKKDVYINELD---- 79
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYF 324
+K+ D K++K T
Sbjct: 80 ------------------------LKILDDEPKKVKLKYT-------------------- 95
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 384
D Y+ F PL++LE++YDK +KE Q NV +RWDVGLNKK AYF K
Sbjct: 96 -------DAIDYKLTFSPLIQLESNYDKSIKEGHKQTNVRIRWDVGLNKKRYAYFVYIKE 148
Query: 385 DGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK--SSAGAP--TEAT 440
+ ++R++ GDELK+ Y+Y WS GH+ ++ +N +E+ LELK + P
Sbjct: 149 ESELRIVVGDELKISYAYPNGNIWSCEGHISRLNNN--EEIALELKVLYNIDGPWNDNIN 206
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV---------------- 484
TGF V+F+WKST++DRMQLAL +FA + S+S ++YH+LLGH++
Sbjct: 207 TGFVVEFVWKSTAYDRMQLALNEFAFNSFSLSGHLYHKLLGHDIIDEPINYNKKEFSLNS 266
Query: 485 -----------DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
++ + ++SAPNL LN SQ+ A++ ++ PLSLIQGPPGTGKT
Sbjct: 267 DSKKYGYNKKSNDNFSTSYKIVNYSAPNLAPLNHSQIDAIQKSLNSPLSLIQGPPGTGKT 326
Query: 534 VTSATIVYQLVK-QTGSPVLVC 554
+T AT+VY + K + G V+V
Sbjct: 327 LTCATLVYHMHKTKMGGKVVVT 348
>gi|242062790|ref|XP_002452684.1| hypothetical protein SORBIDRAFT_04g030630 [Sorghum bicolor]
gi|241932515|gb|EES05660.1| hypothetical protein SORBIDRAFT_04g030630 [Sorghum bicolor]
Length = 981
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 276/563 (49%), Gaps = 76/563 (13%)
Query: 450 KSTSFDRMQ---------------LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP 494
KS DR+Q + L + + + +VS + L G + D V +
Sbjct: 427 KSVRIDRIQGLADSLRYKRNLEALMLLERNGLQEDNVSIAVVATLFGDSKDVVKMAKNNL 486
Query: 495 KHFSAPNLPDLNRSQVYA--------VKHAI--QRPLSLIQGPPGTGKTVTSATIVYQLV 544
+ + PDLN S+ YA +K + +RP+ +IQGPPGTGKTV ++ + V
Sbjct: 487 TDWDESSGPDLNLSERYAYDASQLRALKLGLNKKRPVLIIQGPPGTGKTVLLTELIVRAV 546
Query: 545 KQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM 604
KQ G VLV APSN AVD++ E + RTGL +VRV R SP +I N +
Sbjct: 547 KQ-GERVLVTAPSNAAVDKMVESLSRTGLNIVRVGNPVRL---SPFVASKSLGEIVNCRL 602
Query: 605 N----------SELKKLLQLKEETGELSSADEKRYRMLKKNAE-------KSLLDNADVI 647
++L+K L+ E L++ + + L K+ E + +L +A V+
Sbjct: 603 RQFRKELERKRTDLRKDLRQCIEDDSLAAGIRQLLKQLGKDLENKEKETIREVLSDAQVV 662
Query: 648 CCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
T GA DP + + F ++IDE+ QA EP C +P++ G K+ IL GDHCQL PVV+
Sbjct: 663 LSTNTGAADPLVRRTGSFDLVIIDEAGQAIEPACWIPILQG-KRCILAGDHCQLAPVVLS 721
Query: 707 KKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
+KA GL +SL E L G+ RL VQYRMH ++ + S Y G L++
Sbjct: 722 RKALDGGLGKSLLETASSLHDGLLTTRLTVQYRMHDSIAMWASKEMYHGLLKSSDLVASH 781
Query: 765 KLSK---IDFPWPVPDKPMLFYVTQ---------GQEEIAGSGT-SYVNRTEASNVEKIT 811
L+ + W + P+L T+ +E + +GT S+ N EA V +
Sbjct: 782 LLADSPVVKATW-ITRCPLLLLDTRMPNGALNIGCKEHLDPAGTGSFYNEGEADIVTQQV 840
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ-YQGSLPAKIYQEIEVASVDAFQGREKDL 870
+ CG+ P I V +PY Q L + +Q Y G P +EV+++D+FQGRE D
Sbjct: 841 LNLVHCGVSPSTIVVQSPYIAQVQLLREKLQEYPGLCP------VEVSTIDSFQGREADA 894
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF---YK 927
+I+S VRSN +GFL D RR+NVA+TRA+ + V+ + + LL Y
Sbjct: 895 VIISMVRSNPLGAVGFLGDSRRINVAITRARKHVTVVCDTSTICHSTFLARLLRHIRRYG 954
Query: 928 EQKVLVEGPLNNLKESLILFSKP 950
+ K + G L+ S + FS+P
Sbjct: 955 QVKHVAPGSLDG--ASGLGFSQP 975
>gi|312144201|ref|YP_003995647.1| DNA helicase [Halanaerobium hydrogeniformans]
gi|311904852|gb|ADQ15293.1| DNA helicase [Halanaerobium hydrogeniformans]
Length = 749
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 261/558 (46%), Gaps = 92/558 (16%)
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
+ G +D T+FDRM AL + LL + F
Sbjct: 206 SKGVRLDLFVNETTFDRMFSALEIVKKPQNEIETRKRDILLAKKEFTNTAKISYNSDF-- 263
Query: 500 PNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
LN+SQ+ A+++++ LIQGPPGTGKTVT+ +V + VK+ G+ VL A SN
Sbjct: 264 -----LNQSQIKAIENSLAAEDFYLIQGPPGTGKTVTAVELVLEAVKK-GNKVLTTAGSN 317
Query: 559 IAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNMEMNSELKKL 611
AVD L E + L VVRV R +D V L H+ I ++ E+ L
Sbjct: 318 TAVDNLLELLIEKDLNVVRVGHPIRVNKKLRKNTLDDRV--LKHHSYIEAEKLRDEVSDL 375
Query: 612 L--------------------QLKEETG----------------------ELSSADEKRY 629
+ ++KE EL S +K +
Sbjct: 376 INKQDSYIYPGGKYRRGLSDQEIKEYAERDIEHHVRGISPKVINEMASWLELQSKIDKYF 435
Query: 630 RMLKK---NAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
+ ++K A + +L+ ADVIC T + AG L F+ +IDE+ Q+T+P ++P +
Sbjct: 436 KQIEKLENEAVEDILNKADVICSTNITAGSEILKDFHFNLSVIDEATQSTQPATLIPYFM 495
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF----RLEVQYRMHPEL 742
K +L+GDH QL P V+ ++AA+ GL++SLFERL P L++QYRM+ ++
Sbjct: 496 ADKS-VLIGDHKQLPPTVINQQAAKGGLAKSLFERLS--ETHPTDALSTLKIQYRMNRKI 552
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKID-FPWP---------VPDKPMLFYVT---QGQE 789
F S FY+GSL+ + L + +P P+ PM+F T + E
Sbjct: 553 MGFSSLNFYDGSLRAAPSVAQHNLGDLGVYPQSEKCFTEKALKPEYPMVFLDTKEMEASE 612
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
+ SY N E+ V I R M I VITPY+ Q L QH
Sbjct: 613 RSLKASNSYDNPVESEIVLDILDRAAMLSMDENNIAVITPYKDQVDLLNQHNNLT----- 667
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
EIE+ +VDAFQGREK++++ S VRSND IGFL D RRLNVALTRAK II IG+
Sbjct: 668 ----EIEIDTVDAFQGREKEMVVFSAVRSNDDANIGFLRDLRRLNVALTRAKRKIIFIGD 723
Query: 910 PKVLSKQPLWNNLLNFYK 927
+ + + NLL + K
Sbjct: 724 SSTICQHQSYKNLLTYIK 741
>gi|134115759|ref|XP_773593.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256219|gb|EAL18946.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 952
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 256/501 (51%), Gaps = 75/501 (14%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT-VTSATIVYQLVK---QTGSPVLVCA 555
P +P LNR+Q+ A+ + LSL+QGPPGTGKT V TI +L+K Q P+LVCA
Sbjct: 455 PYVP-LNRTQLRAMGMMLSEALSLVQGPPGTGKTRVIVETI--KLLKHHFQIPHPILVCA 511
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNME--MNSELKKLLQ 613
+N+AVD L + + G+K +R R D L + + M + + +K +
Sbjct: 512 HTNVAVDNLLAGMVKHGVKAIRTGMAERVPTDLKQYTLGIKMESHPMWTCVQTMTEKTKR 571
Query: 614 LKEETGEL----------SSADEKRYRML---KKNAEKSLLDNADVICCTCVGAGDPRLL 660
LK+E L SS +K +R + +++ + LL +ADV+C TC+ A L
Sbjct: 572 LKDEIFRLDFGNPERQQKSSELKKIWRQIWGIQQSITRELLLDADVVCTTCISAISANLN 631
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
I F + +DE+ ATEP ++P++ G+ + ++GDH QL PV++ + A GLS SLFE
Sbjct: 632 SIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFE 691
Query: 721 RLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW---PVP 776
RL+ + L+ QYRMHP L+ F S FY L+NG A ER + F P+P
Sbjct: 692 RLIHEKNVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIP 751
Query: 777 DKPMLFYVTQGQEEIAGSGT----------------SYVNRTEASNVEKITTRFIRCG-- 818
D + G+ ++G T S N EA + + T +
Sbjct: 752 DP------STGELRLSGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPD 805
Query: 819 MKPEQIGVITPYEGQRAFLVQHM---QYQGSLPAKI-------YQEIEVASVDAFQGREK 868
+K QIG+I PY GQ L + + + Q SL + Q++E+ +VD F+GREK
Sbjct: 806 LKGSQIGIIAPYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREK 865
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL---------- 918
++II S VRSN IGFL D RR+NV LTRA+ +I++GN + L + +
Sbjct: 866 EVIIFSTVRSNAGGYIGFLGDWRRVNVGLTRARRALIMVGNKETLKRAKMGKIVAENLPQ 925
Query: 919 -----WNNLLNFYKEQKVLVE 934
W +L+ + +E ++++
Sbjct: 926 GGTRVWQDLMAYLEEGGMILD 946
>gi|390444674|ref|ZP_10232447.1| ATPase AAA [Nitritalea halalkaliphila LW7]
gi|389664177|gb|EIM75683.1| ATPase AAA [Nitritalea halalkaliphila LW7]
Length = 601
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 266/532 (50%), Gaps = 83/532 (15%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFS------ 498
VD ++ S+ M+ A+R+ +A + LLG P FS
Sbjct: 82 VDLLFDEASYRHMESAMRRVIKAKGDRTAELKEVLLGAQ----------PARFSPHATLI 131
Query: 499 APNLPDLNRSQVYAVKHAIQRP--LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
APN LN Q A + IQ+ ++L+ GPPGTGKT T + T VLVCAP
Sbjct: 132 APNRA-LNPPQEKACQ-LIQQAEDVALVHGPPGTGKTSTLVQAILT-ASYTYPQVLVCAP 188
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
SN AVD LTE++ GL+V+R+ +R ID+P+ L +I + ELK LL+ K
Sbjct: 189 SNAAVDLLTERLGEAGLEVLRLGHPAR--IDAPIIASTLDARIAAHDSYKELK-LLRKKA 245
Query: 617 ETGELSSADEKR----------------YRMLKKNAEK-------SLLDNADVICCTCVG 653
E + KR RMLK+NA + A VI CT VG
Sbjct: 246 EALRKQAGKYKRNFGAAERAARNHALQEARMLKENARHLEDYIHYDVFQRAQVIACTLVG 305
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
A +L +F + IDE+ Q EP +P IL A ++++ GDHCQL P + +A RAG
Sbjct: 306 AASAQLDGYRFPLVFIDEAAQGLEPATWIP-ILRADRVVMAGDHCQLPPTIKSFEAGRAG 364
Query: 714 LSQSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
LS++LFE+ V+ +P LEVQYRM + +F + FY+G LQ + +L
Sbjct: 365 LSRTLFEK--VIQRQPEAAVMLEVQYRMPEVIMRFSAQTFYKGKLQAAPITETHRLH--- 419
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSG---------TSYVNRTEASNVEKITTRFIR----C 817
P++P+L ++ + AG+G S +N EA + + + IR
Sbjct: 420 -----PNEPILEFI-----DTAGTGFLEHKEKDSLSTLNEREAVALLRYLEQCIRRLGIG 469
Query: 818 GMKPE--QIGVITPYEGQRAFLVQHMQYQGSLP-AKIYQEI-EVASVDAFQGREKDLIIM 873
MK E IG+I PY Q L H+ P K + E+ V S+D FQG+E+D++ +
Sbjct: 470 HMKQEGWNIGLIAPYSAQVRALRHHIFETFQFPNLKAFSELLTVNSIDGFQGQERDIMAI 529
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
S VR+N+ IGFL+D RR+NVALTRAK +IV+G+ LS P + + +++
Sbjct: 530 SLVRANETGEIGFLSDIRRMNVALTRAKRKLIVMGDSATLSHHPFYADFIDY 581
>gi|58261218|ref|XP_568019.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57230101|gb|AAW46502.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 952
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 255/501 (50%), Gaps = 75/501 (14%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT-VTSATIVYQLVK---QTGSPVLVCA 555
P +P LNR+Q+ A+ + LSL+QGPPGTGKT V TI +L+K Q P+LVCA
Sbjct: 455 PYVP-LNRTQLRAMGMMLSEALSLVQGPPGTGKTRVIVETI--KLLKHHFQIPHPILVCA 511
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNME--MNSELKKLLQ 613
+N+AVD L + + G+K +R R D L + + M + + +K +
Sbjct: 512 HTNVAVDNLLAGMVKHGVKAIRTGMAERVPTDLKQYTLGIKMESHPMWTCVQTMTEKTKR 571
Query: 614 LKEETGEL----------SSADEKRYRML---KKNAEKSLLDNADVICCTCVGAGDPRLL 660
LK+E L SS +K +R + +++ + LL +ADV+C TC+ A L
Sbjct: 572 LKDEIFRLDFGNPERQQKSSELKKIWRQIWGIQQSITRELLLDADVVCTTCISAISANLN 631
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
I F + +DE+ ATEP ++P++ G+ + ++GDH QL PV++ + A GLS SLFE
Sbjct: 632 SIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFE 691
Query: 721 RLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW---PVP 776
RL+ + L+ QYRMHP L+ F S FY L+NG A ER + F P+P
Sbjct: 692 RLIHEKNVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIP 751
Query: 777 DKPMLFYVTQGQEEIAGSGT----------------SYVNRTEASNVEKITTRFIRCG-- 818
D + G+ + G T S N EA + + T +
Sbjct: 752 DP------STGELRLWGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPD 805
Query: 819 MKPEQIGVITPYEGQRAFLVQHM---QYQGSLPAKI-------YQEIEVASVDAFQGREK 868
+K QIG+I PY GQ L + + + Q SL + Q++E+ +VD F+GREK
Sbjct: 806 LKGSQIGIIAPYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREK 865
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL---------- 918
++II S VRSN IGFL D RR+NV LTRA+ +I++GN + L + +
Sbjct: 866 EVIIFSTVRSNAGGYIGFLGDWRRVNVGLTRARRALIMVGNKETLKRAKMGKIVAENLPQ 925
Query: 919 -----WNNLLNFYKEQKVLVE 934
W +L+ + +E ++++
Sbjct: 926 GGTRVWQDLMAYLEEGGMILD 946
>gi|436833526|ref|YP_007318742.1| AAA ATPase [Fibrella aestuarina BUZ 2]
gi|384064939|emb|CCG98149.1| AAA ATPase [Fibrella aestuarina BUZ 2]
Length = 632
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 256/521 (49%), Gaps = 62/521 (11%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
V+ ++ S+D M+ AL+ Q + L G V F P AP L
Sbjct: 122 LGVEVLFDDNSYDEMEAALKTANTLSQKPGHPLIPILTGEQVPT--FNAQTP----APVL 175
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQV AV + L+++ GPPGTGKT T + L+KQ +LV APSN AV
Sbjct: 176 PQLNPSQVAAVHKILSANELAIVHGPPGTGKTTTLIQAIKALIKQDRQKLLVVAPSNTAV 235
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
D L+EK+H GL V+R+ +R + + L L +++ + KKL + E +
Sbjct: 236 DLLSEKLHDEGLNVLRIGNPAR--VSERLMALTLDHKVSTHPHMNAAKKLKKQANEFRTM 293
Query: 622 SSADEKRYRMLKKNAEKSLLD----------------------NADVICCTCVGAGDPRL 659
+ ++ + ++ K+L D NA V+ T VGA + +
Sbjct: 294 AHKYKRNFGKAEREQRKALFDEAHRLLKDVGQAEQYVIDDLIANAQVVTATLVGANNYTV 353
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ +H+++IDE+ QA EP C +P IL A++++L GDHCQL P + +AAR GL +L
Sbjct: 354 RDLTYHTVVIDEAGQALEPACWIP-ILKAQKVVLAGDHCQLPPTIKSAEAARNGLGTTLL 412
Query: 720 ERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQ-------NGVCADERKLSKIDF 771
E+ V L L QYRMH + + S FY+ ++ + + AD+ L+ +D
Sbjct: 413 EKCVALHPEAVTLLNEQYRMHEHIMGYSSQVFYDNQVKAHPSVARHALFADDTALAFVDT 472
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI-------RCGMKPEQI 824
D+ + GTS N EA+ + + T+ + G P I
Sbjct: 473 AGCGFDEKL-------------DGTSSTNPDEAALLIRHLTQLVGDLSQRYSLGTFP-TI 518
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
VI+PY+ Q L + ++ L I V ++D+FQG+E+D++ +S VRSN I
Sbjct: 519 AVISPYKQQINVLTEQLKNSPEL-QPYSGHISVNTIDSFQGQERDIVYISLVRSNTEGDI 577
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
GFL+D RR+NVA+TRA+ +++ G+ L+ P +++ + +
Sbjct: 578 GFLSDIRRMNVAMTRARKKLVIFGDSATLASLPFYSDFITY 618
>gi|291234059|ref|XP_002736968.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 3483
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 181/580 (31%), Positives = 275/580 (47%), Gaps = 84/580 (14%)
Query: 414 VIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSA 473
V+K+PDN + P E + +V+ I K++S RM+ A+R A + V
Sbjct: 2923 VMKMPDNILRQ-----------PAEHLSPCTVEVIPKASSDSRMENAIRNLANTSELVKN 2971
Query: 474 YIYHR--LLGHNVDEVLFRCHLPKHFSAPNLP--DLNRSQVYAVKHAIQRPLSLIQGPPG 529
+ ++ N +L + K P+ P LNR Q VK A++ P +LIQGPPG
Sbjct: 2972 ICMGKRIIMEENKQALLVKDTEIK----PSHPFYKLNRVQDDVVKKALREPFTLIQGPPG 3027
Query: 530 TGKTVTSATIVY---QLVKQTGSP---VLVCAPSNIAVDQLTEKIHRT-----GLKVVRV 578
TGKTVT I Y L KQ +L C PSN ++D +T + R G+K+VRV
Sbjct: 3028 TGKTVTGVHITYWFNHLNKQMSGAKKQLLYCGPSNKSIDVVTSYLKRLPLGDFGMKIVRV 3087
Query: 579 CAKSREAIDSPV-------------------SFLALHNQIR--NMEMNSELKKLLQL-KE 616
+ + E + P+ ++LH+ IR + + + E+++ +L K+
Sbjct: 3088 YSDNIEQKEFPIPGTPQQRSKRRDVIMPPEHQCVSLHHLIRQKSNQFSEEIREFDRLFKD 3147
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
+ + D +Y+ AE L N DVI CTC AG RL ++DE T
Sbjct: 3148 QNYSPTREDIGKYKSTVSKAEAEELTNCDVILCTCSTAGSRRLADCNIQQCIVDECGMCT 3207
Query: 677 EPECMVPVILGAK-QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQ 735
EPE +VP++ Q++L+GDH QL P+V A + G+ SL E+ ++ L Q
Sbjct: 3208 EPEVVVPLVASKPLQVVLIGDHRQLRPIVTESMAKKLGMEISLLEQY---QMKAVMLTDQ 3264
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE----- 790
YRMH + KFPS FY G L G C RK + WP D P +F G+EE
Sbjct: 3265 YRMHQGICKFPSTQFYNGQLVTGECV--RKRPQGLNIWPNQDTPTVFCHIIGKEESLTVS 3322
Query: 791 -IAGSGTSYVNRTEASNVEKIT-TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP 848
G S N E V +I T +R +K I +++ Y Q A + + ++ +G
Sbjct: 3323 TAEGGEESKSNSLEVEQVVRIAITLVVRHKVKSRSIIILSQYRAQCAEITKRLEEKG--- 3379
Query: 849 AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI-------------GFLNDPRRLNV 895
Y EI V++V QG E D ++ S VRS I GF+ D ++NV
Sbjct: 3380 ---YPEINVSTVIISQGSEWDYVLFSTVRSIPKNQIEEKPSRGWLLNHLGFITDEHQINV 3436
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
A+TRAK G+I++GN +L +W +N Y++ + +V+
Sbjct: 3437 AITRAKLGLILVGNRDLLQSHSMWKAFVNHYQQNRCIVDA 3476
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 207/451 (45%), Gaps = 84/451 (18%)
Query: 504 DLNRSQVYAVKHAIQ-----RPLSLIQGPPGTGKTVTSATIVYQLVK-QTGSPVLVCAPS 557
++N +Q+ AV + P +I GP GTGKT T A V Q+VK Q + VL+C S
Sbjct: 1329 EMNENQLKAVASILAPKQTVSPALIIYGPFGTGKTFTLAVSVEQVVKKQPTAKVLICTHS 1388
Query: 558 NIAVD-QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
N A D +T+ +H K + N+I+ + +++E ++ + E
Sbjct: 1389 NSAADLYITDYLHPLVEKGI--------------------NEIKPLRIHAETIRVQSIPE 1428
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNAD------VICCTCVGAGDPRLLKIKFH--SIL 668
+ E+R + ++D+ D VI T + + + ++ H I+
Sbjct: 1429 VVLKYCLIKERRG---VECVHMPMVDDIDQIKKYSVIVTTLANSVALKRIGLEGHFTHII 1485
Query: 669 IDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFERL---- 722
IDE+ QA E E + P+ L + +++L GDH Q+ P V K A QS+ +R+
Sbjct: 1486 IDEAGQALECEAITPLTLATENTKVVLAGDHQQMSPEVYSKCARNLKFDQSILKRICDYY 1545
Query: 723 VVLGIR--PFRLEV--QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPD 777
+ +G + P+R+ + YR ++ +F S FY GS R ++K + P P PD
Sbjct: 1546 IDIGTKSEPYRIMMVDNYRCQSDILQFISKSFY-GS---------RLIAKSNPPQPGHPD 1595
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE--------QIGVIT 828
P+ FY G E TSY N E + C P+ ++GVI+
Sbjct: 1596 IHPLSFYSAYGSE--LKVDTSYCNMAEVMEISDRVEHL--CKHWPKDWGKIDYSKVGVIS 1651
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR------SNDHQ 882
PY Q VQ Q + SL + E+ V + QG+E + +S VR S ++
Sbjct: 1652 PYSTQ----VQ--QIRQSLRKRYLTEVTVDRIFNVQGKEYRALFISPVRTHAAESSTENL 1705
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+GFL D + LN AL+RA+ ++V+G+P L
Sbjct: 1706 NLGFLTDRKLLNTALSRAQSMLVVVGDPVAL 1736
>gi|237843993|ref|XP_002371294.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
gi|211968958|gb|EEB04154.1| ATP-dependent helicase, putative [Toxoplasma gondii ME49]
Length = 1419
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 219/428 (51%), Gaps = 32/428 (7%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIAVDQ 563
L R Q A A+ L+L+QGPPGTGKT + I+ + S +L A SN+A D
Sbjct: 891 LTRPQKAACLSALTNRLTLVQGPPGTGKTHVACAIIDAWQRNDPSKKILAVADSNVAADN 950
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L E + G++ VRV S + Q + + ++LK+ G
Sbjct: 951 LMEGLSARGIRSVRVGNGSESDL-----------QEEAIADLGRYRDYVRLKQ-NGMFGE 998
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
A R + ++ + VI TCVG+G + F ++IDE QA EP ++P
Sbjct: 999 AKTVRMALFREAIRRQ-----PVIIATCVGSGHEMFDDLVFSRVIIDEGAQAIEPSNLIP 1053
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPEL 742
+ G + +L+GDH QL P ++ +AA GL SL ER V GI P +L + Q RMHP +
Sbjct: 1054 LAHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGSGIAPIQLLDEQRRMHPSI 1113
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS----GTSY 798
+ FP+ FY+G +Q+ D + F WP + V ++GS GTS
Sbjct: 1114 AYFPNLQFYDGKIQSRDVDDGNRPPVAGFRWPS-QHSRVCLVDISAAGLSGSETSQGTSK 1172
Query: 799 VNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
N E + I G + P QIGV+TPY+ Q+A L + + + +P YQ IEV
Sbjct: 1173 YNAAEIDPIIAILQSVANEGSVLPSQIGVLTPYDAQKARLRKAIN-ETFVPPACYQ-IEV 1230
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
SVD FQG+EKDLII S VRSN IGFL DPRR+NV LTRAK G+IV+G+ +
Sbjct: 1231 DSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAKRGVIVVGD-----QLT 1285
Query: 918 LWNNLLNF 925
LWN+ N+
Sbjct: 1286 LWNDKTNW 1293
>gi|145514990|ref|XP_001443400.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410778|emb|CAK76003.1| unnamed protein product [Paramecium tetraurelia]
Length = 1068
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 171/514 (33%), Positives = 261/514 (50%), Gaps = 84/514 (16%)
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAIQ--RPLSLIQGPPGTGKTVTSATIV---YQLVKQ 546
+L K F + N+SQ ++K +Q + +SL+QGPPGTGKT T I+ Y+ +K
Sbjct: 522 YLTKFFKLVD-QKFNKSQANSIKEILQQEKGISLLQGPPGTGKTHTLIGILSGAYEYMKM 580
Query: 547 TGS----PVLVCAPSNIAVDQLTEKIHR-----------TGLKVVRVCAKSREAIDS--- 588
T +L+CAPSN A+D++ +I R +KV+R+ E+ S
Sbjct: 581 TDKFPRKKILICAPSNAAIDEIILRIMRPDSLFDSDGKPREVKVIRIGLIDEESEFSDTV 640
Query: 589 ---PVSFLA----LHNQIRNMEMN------------------------------------ 605
+ +LA L +QI E +
Sbjct: 641 KKVSLEYLAQNMLLKSQIIKQEADQKTTADLRIDICKIQNQIKKLQKIKKQDLTDQSTYS 700
Query: 606 ---SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
S LK L +K++ E A + +Y+ + +L+ A++IC T +G +L K
Sbjct: 701 EQLSNLKSDLSIKQQYLERMRAKKIQYKESYNLFCEKILNEAEIICSTLNSSGSEKLSKY 760
Query: 663 --KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
+ +++DE+ Q TEP ++P+ LG +++IL+GD QL + ++SLFE
Sbjct: 761 MDQIELLIVDEAAQCTEPSNIIPLRLGVEKMILIGDPKQLAATTFSPSSTTGFYNRSLFE 820
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
R++ +P L +QYRM E+ KFPS FY+ L + +RKL P K M
Sbjct: 821 RILDNNFQPHFLNIQYRMDSEIRKFPSFEFYQNKLIDHESVIQRKL-----PENYFKKQM 875
Query: 781 LFY-VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ 839
LF + GQE+ TSY+N EA+ V ++ I+ K + IGVI+ Y+ Q L+Q
Sbjct: 876 LFLDIIDGQEK--RDNTSYINEKEANLVIQLINS-IKEQFKTQTIGVISSYKAQVK-LIQ 931
Query: 840 HMQYQGSLPAKIYQE--IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
+ Q + K + V +VD+FQG+EKD+II SCVRS++ +GIGFLND RR+NVAL
Sbjct: 932 TLIKQSNTRLKDIDNKILSVNTVDSFQGQEKDIIIFSCVRSSECKGIGFLNDGRRINVAL 991
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
TRAK+ + VIGN LSK LW NLL +E+++
Sbjct: 992 TRAKFALFVIGNGLTLSKGQLWRNLLQNMQERQL 1025
>gi|321256931|ref|XP_003193410.1| DNA helicase [Cryptococcus gattii WM276]
gi|317459880|gb|ADV21623.1| DNA helicase, putative [Cryptococcus gattii WM276]
Length = 954
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 240/468 (51%), Gaps = 66/468 (14%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT-VTSATIVYQLVK---QTGSPVLVCA 555
P++P LNR+Q+ A+ + LSL+QGPPGTGKT V TI +L+K Q P+LVCA
Sbjct: 457 PHVP-LNRTQLRAMGMMLTEALSLVQGPPGTGKTRVIVETI--KLLKHHFQIPHPILVCA 513
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNM--EMNSELKKLLQ 613
+N+AVD L + + G+K +R R + L + + M + S +K +
Sbjct: 514 HTNVAVDNLLAGMVKHGVKAIRTGTAERVPAELKQYTLEIKMESHPMWISVQSMTEKAKR 573
Query: 614 LKEETGELSSADEKRYRMLKKNAE----------------KSLLDNADVICCTCVGAGDP 657
LK+E + + +R +KN E + LL +ADV+C TC+ A
Sbjct: 574 LKDEIFRMDFDNPERQ---QKNLEMKKIWRQIWGIQQIINRELLLDADVVCTTCISAISA 630
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
L I F + +DE+ ATEP ++P++ G+ + ++GDH QL PV++ A GLS S
Sbjct: 631 NLNSIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSGDAHAGGLSTS 690
Query: 718 LFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW--- 773
LFERL+ P L+ QYRMHP L+ F S FY L+NG A ER + F
Sbjct: 691 LFERLIHEKDVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTAASERPPPETAFLIPED 750
Query: 774 PVPDKPMLFYVTQGQEEIAGSGT----------------SYVNRTEASNVEKITTRFIRC 817
P+PD + G+ ++G T S N EA + + T +
Sbjct: 751 PIPDP------STGELRLSGEKTNLTFLNHSHPESPVLQSMANEGEAEIIVDVITDLLHK 804
Query: 818 G--MKPEQIGVITPYEGQRAFLVQHMQYQGSLPA--KIY--------QEIEVASVDAFQG 865
+K QIG+I PY GQ L + + G+ + KI Q++E+ +VD F+G
Sbjct: 805 NPDLKGSQIGIIAPYLGQIKVLSETLFASGTQDSLKKILGDERTEEVQDVEIKTVDGFEG 864
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
REK++II S VRSN IGFL D RR+NV LTRA+ +I++GN + L
Sbjct: 865 REKEVIIFSTVRSNPGGYIGFLGDWRRVNVGLTRARRALIMVGNKETL 912
>gi|50293759|ref|XP_449291.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528604|emb|CAG62265.1| unnamed protein product [Candida glabrata]
Length = 1125
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/481 (33%), Positives = 246/481 (51%), Gaps = 67/481 (13%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
N SQ A+++ + ++++QGPPGTGKT T I+ Q+ + S P+L A SNIA+D
Sbjct: 652 FNDSQKRAIQNVLNNKVTILQGPPGTGKTATIEEIILQMREHFNSFPILCVAASNIAIDN 711
Query: 564 LTEKI--HRTGLKVVRVCAKSRE---AIDSPVSFLALHNQIR---NMEMNSELKKLLQLK 615
+ EK R +K++R+ ++++E +D P+ + LHN +R N E +KL
Sbjct: 712 IAEKFIEKRPDIKILRIVSRTKEKEYGMDHPLGKICLHNIVRENLNEESRDTARKLAM-- 769
Query: 616 EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQ 674
+T S RY K+ ++ +I T V AG L IK +++DES Q
Sbjct: 770 GQTKSFSKNALMRYFRDKEGIVNKYINQCTIIFSTNVAAGSTELKVIKEIPVVIMDESTQ 829
Query: 675 ATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFR 731
++E ++P+ L G K + VGD QL + LS SLFER++ G P
Sbjct: 830 SSEVSTLIPLSLPGIKTFVFVGDDKQLSSF-----SDIPQLSLSLFERILQNGTYQNPHM 884
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY----VTQG 787
L QYRMHP +S+FP Y+ LQ+GV A++++L K+ P+ FY Q
Sbjct: 885 LNTQYRMHPTISEFPRTMIYKNELQDGVTAEQKQLDKVAH-------PVYFYDYRATAQN 937
Query: 788 QEEIAG------SGTSYVNRTEASNV-EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
+E++ + SY NR E + E + I G+ E IG+ITPY GQR L
Sbjct: 938 REQLHRVRRRDVTTVSYYNRAECRMILEVVHMLVIEKGVPLEDIGIITPYAGQREQLATM 997
Query: 841 MQY------QGSLPAKIYQE----------------------IEVASVDAFQGREKDLII 872
+Q +G + K +E ++V++VDAFQG EK +I+
Sbjct: 998 VQADELINPRGLVIEKQSEEKDLFSVNEQSMGSNNTICIVNGLQVSTVDAFQGHEKSVIV 1057
Query: 873 MSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNLLNFYKEQKV 931
SCVR+N+ IGFL D RRLNVALTRAK ++++G VLS+ +W +++ + K+
Sbjct: 1058 FSCVRNNESNTIGFLKDQRRLNVALTRAKNSLVIVGCSSVLSRSDSIWKKYIDYLSKNKM 1117
Query: 932 L 932
+
Sbjct: 1118 I 1118
>gi|255721903|ref|XP_002545886.1| hypothetical protein CTRG_00667 [Candida tropicalis MYA-3404]
gi|240136375|gb|EER35928.1| hypothetical protein CTRG_00667 [Candida tropicalis MYA-3404]
Length = 1106
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 248/469 (52%), Gaps = 64/469 (13%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVD 562
+LN SQ V+ + ++++QGPPGTGKT T I+ QL+ + P+LV A SNIA+D
Sbjct: 640 NLNDSQKKGVQSVLNNSITVLQGPPGTGKTSTIYEIILQLLDSLNTYPILVVAASNIAID 699
Query: 563 QLTEKIHRTGLK-VVRVCAKSREA---IDSPVSFLALHNQI------RNMEMNSELKKLL 612
+ EK+ + K ++R+ A +E P++ + LH+++ R ++ E+++
Sbjct: 700 NIAEKLMKNHEKDILRITAGEKERDYNRSHPLASICLHHKMYDAMPMRYQQVMDEMRRGY 759
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
T ++R+ + ++ A V+ T V AG + L ++IDE+
Sbjct: 760 APSIGTTAYKKFAQERFFL-----SNQIVTQAKVVLATPVVAGGIKSLN-NVRVVIIDEA 813
Query: 673 MQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RP 729
Q++EP ++P+ L ++L+LVGD QL + LS SLFER+++ G P
Sbjct: 814 TQSSEPTTLIPLALPSVEKLVLVGDQKQLSCFSLI-----PNLSLSLFERVLLNGTYKTP 868
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
L+ QYRMHP++S+F N FY G L++G+ + R + V P+ F+ T+G
Sbjct: 869 HMLDTQYRMHPDISEFSRNRFYGGLLKDGIDSSARHIEG------VTSSPLYFWDTKGNA 922
Query: 790 EIAG--------SGTSYVNRTEASNVEKI-TTRFIRCGMKPEQIGVITPYEGQRAFLV-- 838
G +Y NR E + ++++ T I G+K +QIG++TPY GQR +
Sbjct: 923 REQSVRNFLREDRGYTYTNRDEIAYIQQVLRTLIISKGVKRDQIGIVTPYSGQRDLISSV 982
Query: 839 -----------QHMQYQ--------GSLPAKIY--QEIEVASVDAFQGREKDLIIMSCVR 877
+ M+ + S P I+ I +AS+DAFQGREKD ++MSCVR
Sbjct: 983 LVNDEIINPTNEQMKTEVDIDDLKNDSKPVTIHIVSGIMIASIDAFQGREKDFMVMSCVR 1042
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNF 925
SN IGFL D RRLNVALTRAKY +I+IG+ + L + LW + L +
Sbjct: 1043 SNTKGVIGFLKDERRLNVALTRAKYSLIMIGDVECLKRGDKLWKDYLEY 1091
>gi|221483749|gb|EEE22061.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1431
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 219/428 (51%), Gaps = 32/428 (7%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIAVDQ 563
L R Q A A+ L+L+QGPPGTGKT + I+ + S +L A SN+A D
Sbjct: 891 LTRPQKAACLSALTNRLTLVQGPPGTGKTHVACAIIDAWQRNDPSKKILAVADSNVAADN 950
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L E + G++ VRV S + Q + + ++LK+ G
Sbjct: 951 LMEGLSARGIRSVRVGNGSESDL-----------QEEAIADLGRYRDYVRLKQ-NGMFGE 998
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
A R + ++ + VI TCVG+G + F ++IDE QA EP ++P
Sbjct: 999 AKTVRMALFREAIRRQ-----PVIIATCVGSGHEMFDDLVFSRVIIDEGAQAIEPSNLIP 1053
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPEL 742
+ G + +L+GDH QL P ++ +AA GL SL ER V GI P +L + Q RMHP +
Sbjct: 1054 LAHGCRNFVLIGDHKQLPPTILSPEAAARGLDVSLLERFVGSGIAPIQLLDEQRRMHPSI 1113
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS----GTSY 798
+ FP+ FY+G +Q+ D + F WP + V ++GS GTS
Sbjct: 1114 AYFPNLQFYDGKIQSRDVDDGNRPPVAGFRWPS-QHSRVCLVDISAAGLSGSETSQGTSK 1172
Query: 799 VNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
N E + I G + P QIGV+TPY+ Q+A L + + + +P YQ IEV
Sbjct: 1173 YNAAEIDPIIAILQSVANEGSVLPSQIGVLTPYDAQKARLRKAIN-ETFVPPACYQ-IEV 1230
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
SVD FQG+EKDLII S VRSN IGFL DPRR+NV LTRAK G+IV+G+ +
Sbjct: 1231 DSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAKRGVIVVGD-----QLT 1285
Query: 918 LWNNLLNF 925
LWN+ N+
Sbjct: 1286 LWNDKTNW 1293
>gi|338210831|ref|YP_004654880.1| type III restriction protein res subunit [Runella slithyformis DSM
19594]
gi|336304646|gb|AEI47748.1| type III restriction protein res subunit [Runella slithyformis DSM
19594]
Length = 636
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 166/527 (31%), Positives = 272/527 (51%), Gaps = 70/527 (13%)
Query: 443 FSVDFIWKSTSFDRMQLALRK-FAVDDQSV---SAYIYHRLLGHNVDEVLFRCHLPKHFS 498
+D ++ S++ MQ AL++ AV ++S + + L G + F+ P +
Sbjct: 122 LGIDVLFDDNSYEEMQSALKQAMAVLEKSTNEPATRLAAILTGEK--KPTFKEQAPFY-- 177
Query: 499 APNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
+ P LN SQ AV ++ L+++ GPPGTGKT T + LVK VLV APS
Sbjct: 178 --STPSLNPSQQSAVDSILRANELAVVHGPPGTGKTTTLVQAIKALVKTENQKVLVVAPS 235
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEE 617
N AVD L+EK+H GL V+RV +R + ++ L L +++ E K+L + +E
Sbjct: 236 NTAVDLLSEKLHEEGLNVLRVGNPAR--VTERLTALTLDSKMAEHPYMKEAKRLKKQAQE 293
Query: 618 TGEL----------SSADEKR------YRMLKK--NAEKSLLDN----ADVICCTCVGAG 655
+ S D+++ +R++K+ N E+ ++D+ A V+ T VG+
Sbjct: 294 LKAMAHKYKRSFGKSERDQRKLLFVEAHRIMKEVGNTEQYIIDDLLVKAQVVTATLVGSN 353
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
+ ++++H+++IDE+ QA EP C +PV L A+++IL GDHCQL P + + AA+ GLS
Sbjct: 354 HYTVREVRYHTVVIDEAGQALEPACWIPV-LKAQKVILAGDHCQLSPTIKSEVAAKGGLS 412
Query: 716 QSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
+L E+ V L E QYRM+ ++ + S FY+ L+ R L
Sbjct: 413 TTLLEKCVDAHPEAVTLLEEQYRMNEQIMGYSSQIFYQHKLKAHASVAHRVLF------- 465
Query: 775 VPDKPMLFYVTQG---QEEIAGSGTSYVNRTEAS-------------NVEKITTRFIRCG 818
DKP+LF T G +E++ GTS N EA+ +K T F
Sbjct: 466 TDDKPVLFIDTAGCGFEEKL--EGTSSTNPEEAALLLKHLGLLTAEWEAQKTDTSF---- 519
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
I +I PY+ Q L + + + L + + V +VD+FQG+E+D++ +S RS
Sbjct: 520 ---PSIAIIAPYKQQIHVLAEQLSHVPELQPYLAH-MAVNTVDSFQGQERDVVYISMTRS 575
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
N IGFL D RR+NVA+TRA+ ++V+G+ L++ P + + +++
Sbjct: 576 NSEGSIGFLADIRRMNVAMTRARKKLVVVGDSATLAQFPFYADFISY 622
>gi|401400080|ref|XP_003880707.1| putative ATP-dependent helicase [Neospora caninum Liverpool]
gi|325115118|emb|CBZ50674.1| putative ATP-dependent helicase [Neospora caninum Liverpool]
Length = 1394
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/428 (36%), Positives = 219/428 (51%), Gaps = 32/428 (7%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIAVDQ 563
L R Q A A+ L+L+QGPPGTGKT + I+ + S +L A SN+A D
Sbjct: 866 LTRPQKAACLSALTNRLTLVQGPPGTGKTHVACAIIDAWQRNDPSKKILAVADSNVAADN 925
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L E + G++ VRV S + Q + + ++LK+ G
Sbjct: 926 LMEGLSARGIRSVRVGNGSESDL-----------QEEAIADLGRYRDYVRLKQ-NGMYGE 973
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
A R + ++ + VI TCVG+G + F ++IDE QA EP ++P
Sbjct: 974 AKTVRMALFREAIRRQ-----PVIIATCVGSGHEMFDDLVFPRVIIDEGAQAIEPSNLIP 1028
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPEL 742
+ G + +L+GDH QL P ++ +AA GL SL ER V GI P +L + Q RMHP +
Sbjct: 1029 LARGCRNFVLIGDHKQLPPTILSPEAASRGLDVSLLERFVGSGIAPIQLLDEQRRMHPSI 1088
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS----GTSY 798
+ FP+ FY+G +Q+ D + F WP + + V ++GS GTS
Sbjct: 1089 AYFPNLQFYDGKIQSRDVDDRNRPPVAGFRWPSQNSRVCL-VDISAAGLSGSEASQGTSK 1147
Query: 799 VNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
+ E + I G + P QIGV+TPY+ Q+A L + + PA YQ IEV
Sbjct: 1148 YSAAEIDPIIAILQSVANEGSVLPSQIGVLTPYDAQKARLRKAINETFEPPA-CYQ-IEV 1205
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
SVD FQG+EKDLII S VRSN IGFL DPRR+NV LTRAK G+IV+G+ +
Sbjct: 1206 DSVDGFQGKEKDLIIFSAVRSNARGEIGFLRDPRRMNVMLTRAKRGVIVVGD-----QLT 1260
Query: 918 LWNNLLNF 925
LWN+ N+
Sbjct: 1261 LWNDATNW 1268
>gi|218191424|gb|EEC73851.1| hypothetical protein OsI_08612 [Oryza sativa Indica Group]
Length = 979
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 187/591 (31%), Positives = 289/591 (48%), Gaps = 82/591 (13%)
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAV 466
G + L L+S G PT FS F KS DR+Q + L++ +
Sbjct: 403 GCSITLALESRHGDPT-----FSRLF-GKSVRIDRIQGLADALTYERNLEALIILQRNGL 456
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD--------LNRSQVYAVKHAI- 517
+ S + L G N D + + + + PD L+ SQ+ A+ +
Sbjct: 457 QKSNASIGVVATLFGDNKDVMKMEQNHLTDWGESSAPDPRISERYALDASQLKALSLGLN 516
Query: 518 -QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV 576
+RP+ +IQGPPGTGKTV ++ + V+Q G VLV APSN AVD + E++ TGL +V
Sbjct: 517 KKRPVLIIQGPPGTGKTVLLTELIVRAVQQ-GENVLVTAPSNAAVDNMVERLSNTGLNIV 575
Query: 577 RVCAKSREAIDSPVSFLALHNQI-RNMEM--------NSELKKLLQLKEETGELSSADEK 627
RV +R I V+ +L + R +E S+L+K L E L++ +
Sbjct: 576 RVGNPAR--ISPSVASKSLAEIVNRRLEQFRKELERKRSDLRKDLSYCIEDDSLAAGIRQ 633
Query: 628 RYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPE 679
+ L ++ EK +L A V+ T GA DP + + F ++IDE+ QA EP
Sbjct: 634 LLKQLGRDLEKKEKEMIREVLSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPS 693
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYR 737
C +P++ G K+ IL GDHCQL PV++ +K GL +SL ER L G+ RL VQ+R
Sbjct: 694 CWIPILQG-KRCILAGDHCQLAPVILSRKVLDGGLGKSLLERASSLHNGLLTTRLTVQHR 752
Query: 738 MHPELSKFPSNFFYEGSLQNGVCADERKLSK---IDFPWPVPDKPMLFYVTQ-------- 786
M+ ++ + S Y G L++ + L+ + W + P+L T+
Sbjct: 753 MNDSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATW-ITRCPLLLLDTRMPYGALDT 811
Query: 787 ---GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ- 842
Q ++AG+G S+ N EA V + + CG+ P I V +PY Q L + ++
Sbjct: 812 GCGEQIDLAGTG-SFYNDGEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEE 870
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
Y G +EV+++D+FQGRE D +++S VRSN +GFL D RR+NVA+TRA
Sbjct: 871 YPG------LSGVEVSTIDSFQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACR 924
Query: 903 GIIVIGNPKVLSKQPLWNNLLNF---YKEQKVLVEGPLNNLKESLILFSKP 950
+ V+ + + LL Y + K +V G L+ + S + FS+P
Sbjct: 925 HVTVVCDTSTICHSTFLARLLRHIRRYGQVKHVVPGSLDGV--SGLGFSQP 973
>gi|373958634|ref|ZP_09618594.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
gi|373895234|gb|EHQ31131.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
Length = 636
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 165/522 (31%), Positives = 264/522 (50%), Gaps = 56/522 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP-- 500
+D ++ S+D MQ AL++ +V + RL+ +VL P FSAP
Sbjct: 122 LGIDLLFDDNSYDEMQNALKQASVLSEKAGE---GRLV-----KVLTGAEQPT-FSAPLL 172
Query: 501 --NLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
L LN SQ AV+ + + L+++ GPPGTGKT T + L+ Q +LV APS
Sbjct: 173 LPKLTGLNPSQQAAVEKIVSAQDLAIVHGPPGTGKTTTLVQAIKSLISQGEKQLLVVAPS 232
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEE 617
N AVD L+EK+ GL V+R+ +R + + L L +++ ++KKL + E
Sbjct: 233 NTAVDLLSEKLAGEGLNVLRIGNPAR--VSDRLMSLTLDSKMAEHGRMKDIKKLKKQAAE 290
Query: 618 TGELSSADEKRYRMLKKNAEKSLLD----------------------NADVICCTCVGAG 655
++ ++ + +++ K+L D A VI T VG+
Sbjct: 291 FKNMAHKYKRSFGKAERDQRKALFDEAHKIMKDVGKTEQYIIDDLVGRAQVITATLVGSN 350
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
+ ++F++++IDE+ QA EP C +P IL A+++IL GDH QL P + KAA GLS
Sbjct: 351 HYTIRGLQFNTVVIDEAGQALEPACWIP-ILKAQKVILAGDHFQLSPTIKSAKAAHDGLS 409
Query: 716 QSLFERLVVLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
+L E+ + L LE QYRM+ + + S FY+ LQ +R L D P+
Sbjct: 410 NTLLEKCITLHPEAVVLLEEQYRMNEAIMTYSSQVFYQNKLQAHASVAQRLLFTADAPFS 469
Query: 775 VPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPE--QIGVIT 828
D + + + GTS N EA ++EK+ T I +++
Sbjct: 470 YVDTAGCGFDEKPE------GTSMANAEEAGFLFKHLEKLVTELNEHYTTENFPTIAIVS 523
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
PY+ Q L Q+ L ++YQ+ I V ++D+FQG+E+D++ +S RSN IGFL
Sbjct: 524 PYKEQIRLLKDQQQHWPGL--QLYQDKISVNTIDSFQGQERDIVYISMTRSNTKGEIGFL 581
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+D RR+NVA+TRA+ +I+IG+ L++ P + +++ Y EQ
Sbjct: 582 SDIRRMNVAMTRARKKLIIIGDSSTLAQAPFYADMIK-YAEQ 622
>gi|384248299|gb|EIE21783.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 426
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/457 (33%), Positives = 236/457 (51%), Gaps = 68/457 (14%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP--------VLVCAP 556
LNRSQ A+ A+ +L QGPPGTGKT T ++ L + +G+P +L CA
Sbjct: 1 LNRSQQRAIATAMSSTFTLWQGPPGTGKTRTLLALLEILARISGTPQRAAMMGPILACAD 60
Query: 557 SNIAVDQLTEKIHRTGLKVVRVC--AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQL 614
+N A D + E + G+ V R+ AK R FL L + + + + ++ ++
Sbjct: 61 TNAATDNIVEGLLARGINVTRMGQPAKVRP-------FLCLLSLVLLLHAVAARRQPARV 113
Query: 615 KEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD-PRLLKIKFHSILIDESM 673
+ G LSS K +++ E S+L ++ V+C TC GAGD RL ++ +++DE+
Sbjct: 114 QSFCGLLSSKFIKANELVQAAGE-SVLRDSQVVCATCAGAGDDQRLFTARYKMVIVDEAT 172
Query: 674 QATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE 733
QATEP ++P++ GA+ +++ GD QL P + + A A L ++LF+RL G+ P L+
Sbjct: 173 QATEPSNIIPLVRGAECVVMAGDPKQLPPTLQSQGALDAQLDRTLFDRLQESGLGPVLLD 232
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP-MLFYVTQGQEE-- 790
+QYRMHP +++FPS FY+G L+ G+ A+ER L + WP P P M+ G EE
Sbjct: 233 MQYRMHPLIAEFPSARFYQGKLKTGISAEERPLPQ-GLAWPNPGCPVMMVECETGLEERS 291
Query: 791 ----------------------IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVIT 828
A +G+SY N+ EA +R P+ V
Sbjct: 292 MTGSIGVTKAKSPAKPGAESAAAANTGSSYFNKQEA-------ILAVRYASPPKP--VAK 342
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
P E F M Q + V+SVD +QGRE D+I+ S VR N+ +GF+
Sbjct: 343 PLE----FYSVIMGVQ----------VTVSSVDGYQGREADVIVFSAVRCNEMGSLGFVA 388
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
DPRRLNVA+TR + G++V+G+P LS W + +
Sbjct: 389 DPRRLNVAITRPRRGLVVVGSPNTLSSDGGWRGWVRW 425
>gi|326668922|ref|XP_003198895.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Danio rerio]
Length = 2464
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 251/489 (51%), Gaps = 72/489 (14%)
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVY------QLVKQTGS---PVL 552
L LN SQ A++ A+ P +LIQGPPGTGKTV I+Y Q ++ +GS +L
Sbjct: 1973 LSHLNNSQSKAIREALTNPFTLIQGPPGTGKTVVGVHILYWLHKNIQQLQASGSKKRAIL 2032
Query: 553 VCAPSNIAVDQLT-EKIH-RTGLKVVRVCAKSREAIDSP--------------------- 589
C PSN +VD + +H R LK +RV + E ++ P
Sbjct: 2033 YCGPSNKSVDVVAGHLLHLRDHLKPLRVYSDQMEMLEFPYPGCNLKLSRNSKRGEKPNTE 2092
Query: 590 VSFLALHNQIRNMEMN--SELKKLLQLKEETG-ELSSADEKRYRMLKKNAEKSLLDNADV 646
+S +ALH+ IR E N S + +K + G +L+ + K +R + K A K L + DV
Sbjct: 2093 LSSIALHHLIRK-EGNPFSTQIRAFDMKVQRGDQLTDEERKLFREILKKARKHELLHHDV 2151
Query: 647 ICCTCVGAGDPRLLK-IKFHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVV 704
I CTC A P L + + F I+IDE ATEPE +P++ +Q++L+GDH QL PVV
Sbjct: 2152 ILCTCTAASHPALAETLDFKQIIIDECAMATEPEAFIPLVAHKPEQIVLLGDHKQLQPVV 2211
Query: 705 MCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
C+ A R G+S+SLFER + + L+ QYRM ++ FPSN FY G LQ G+ A
Sbjct: 2212 HCEVAERLGMSRSLFERYMENALM---LDTQYRMQEDICAFPSNEFYGGRLQTGIPAK-- 2266
Query: 765 KLSKIDFPWPVPDKPMLFYVTQGQEEI------AGSGTSYVNRTEASNVEKITTRFIR-C 817
SK+ F ++F +G+E+ G+ S N EA V + T + ++
Sbjct: 2267 --SKL-FLTQTKQTCIVFGHVEGKEKSLVVRTEQGNENSKANMEEAEEVVRDTQQLVKGA 2323
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+K + I ++TPY Q A + + SL ++I V ++ QG E +IMS VR
Sbjct: 2324 GIKTKDIAILTPYNAQVAKISE------SLHNNHIRDITVNTIMRSQGSEWRYVIMSTVR 2377
Query: 878 SNDHQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
S I GF+ DP ++NV +TRA+ G+ +IGN +L LW LLN
Sbjct: 2378 SCPKSEIETQPPKSWIMKRLGFITDPHQVNVGITRAQEGLCIIGNENLLRCSSLWRKLLN 2437
Query: 925 FYKEQKVLV 933
Y+E+ +V
Sbjct: 2438 HYQEKGCVV 2446
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 194/474 (40%), Gaps = 92/474 (19%)
Query: 520 PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC 579
P LI GP GTGKT T A + LV+Q + +L+C +N + D L K H
Sbjct: 444 PPLLIYGPFGTGKTRTLAKMAQALVQQPHNKILICTHTNSSAD-LYIKAH---------- 492
Query: 580 AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSAD--EKRYRMLKKNA- 636
H +RN ++++ + L++K +L+S D +Y L + A
Sbjct: 493 ---------------FHEYVRNGQLHA---RPLRIKAMEIKLASTDFITLQYCHLSREAN 534
Query: 637 -----EKSLLDNADVICCTCVGA---GDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
+K++LD+ ++ T A D +L + F ILIDE+ Q E E ++ + L
Sbjct: 535 CFEFPDKAVLDSTRIVITTTSLARFFNDMKLPENYFSHILIDEASQMLECEALMALSLAG 594
Query: 689 K--QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV---------VLGIRPFRLEVQYR 737
+++L GDH Q+GP + + + +L RL V YR
Sbjct: 595 NNTRVVLAGDHMQMGPKLFSVRPDKCS-EHTLLNRLFYHYQAENSDVAKQSRIIFNENYR 653
Query: 738 MHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP----MLFYVTQGQEEIAG 793
++ F S FY G + I VP P + F+ +G+ +
Sbjct: 654 STKDIVDFVSTHFYVG-----------RSDVIKARGNVPSHPQQHALQFHHVRGECCLDP 702
Query: 794 SGTSYVNRTEASNVEKITTRFIR------CGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
S+ N + V I ++ PE + V++ +G++ +++ L
Sbjct: 703 MSMSWFNAEQIVRVVHILQEIMKEWPQEWGAADPESVCVLS--QGRQVLEIRYRLRLLGL 760
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRS------NDHQGIGFLNDPRRLNVALTRAK 901
P V + + QG++ +I++S V + D + F ND R LN +TRA+
Sbjct: 761 P-----RFTVENAENVQGKQFRVIVISTVHTKDSLLETDRTCLEFFNDMRVLNTIMTRAQ 815
Query: 902 YGIIVIGNPKVLSKQP------LWNNLLNFYKEQKVLVEGPLNNLKESLILFSK 949
I V+G+ LS LW + ++ + L++LK+ L+ SK
Sbjct: 816 SQIFVVGDAAALSCHQFGMCWRLWRAYIEECINKESCHDLTLDSLKQDLLEISK 869
>gi|41053136|dbj|BAD08079.1| putative DNA helicase [Oryza sativa Japonica Group]
Length = 794
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 285/587 (48%), Gaps = 74/587 (12%)
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAV 466
G + L L+S G PT FS F KS DR+Q + L++ +
Sbjct: 218 GCSITLALESRHGDPT-----FSRLF-GKSVRIDRIQGLADALTYERNLEALIILQRNGL 271
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD--------LNRSQVYAVKHAI- 517
+ S + L G N D + + + + PD L+ SQ+ A+ +
Sbjct: 272 QKSNASIGVVATLFGDNKDVMKMEQNHLTDWGESSAPDPRISERYALDASQLKALSLGLN 331
Query: 518 -QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV 576
+RP+ +IQGPPGTGKTV ++ + V+Q G VLV APSN AVD + E++ TGL +V
Sbjct: 332 KKRPVLIIQGPPGTGKTVLLTELIVRAVQQ-GENVLVTAPSNAAVDNMVERLSNTGLNIV 390
Query: 577 RVCAKSREAIDSPVSFLA------LHNQIRNMEM-NSELKKLLQLKEETGELSSADEKRY 629
RV +R + LA L + +E S+L+K L E L++ +
Sbjct: 391 RVGNPARISPSVASKSLAEIVNGRLEQFRKELERKRSDLRKDLSYCIEDDSLAAGIRQLL 450
Query: 630 RMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECM 681
+ L ++ EK L A V+ T GA DP + + F ++IDE+ QA EP C
Sbjct: 451 KQLGRDLEKKEKEMIREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCW 510
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMH 739
+P++ G K+ IL GDHCQL PV++ +KA GL +SL ER L G+ RL VQ+RM+
Sbjct: 511 IPILQG-KRCILAGDHCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMN 569
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSK---IDFPWPVPDKPMLFYVTQ---------G 787
++ + S Y G L++ + L+ + W + P+L T+
Sbjct: 570 DSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATW-ITRCPLLLLDTRMPYGALDTGC 628
Query: 788 QEEIAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGS 846
E+I SGT S+ N EA V + + CG+ P I V +PY Q L + ++
Sbjct: 629 GEQIDLSGTGSFYNDGEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPG 688
Query: 847 LPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
L +EV+++D+FQGRE D +++S VRSN +GFL D RR+NVA+TRA + V
Sbjct: 689 LSG-----VEVSTIDSFQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVTV 743
Query: 907 IGNPKVLSKQPLWNNLLNF---YKEQKVLVEGPLNNLKESLILFSKP 950
+ + + LL Y + K +V G L+ + S + FS+P
Sbjct: 744 VCDTSTICHSTFLARLLRHIRRYGQVKHVVPGSLDGV--SGLGFSQP 788
>gi|389738890|gb|EIM80085.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 806
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 163/495 (32%), Positives = 234/495 (47%), Gaps = 86/495 (17%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---QTGSPVLVCAP 556
P L LN++Q+ AV I SLIQGPPGTGKT T V +L+K Q P++VC
Sbjct: 242 PVLEGLNKTQLRAVALMIGERASLIQGPPGTGKTKTIIETV-KLLKVHFQVPHPIMVCTY 300
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
+N+AVD L E + +G+K +RV + + + L +++ N + E ++L Q E
Sbjct: 301 TNVAVDNLVEGLAASGVKPLRVGYGGK--VKKSLYPHTLESKLENHALRPEFERLTQEGE 358
Query: 617 ETGELSSADEKRYRMLKKNAEKS------------------------------------- 639
+ S A +K+ R L K A+
Sbjct: 359 HLRKRSGALQKKIRELSKKADSGDEGGAAVTRARRMLERAEMEGITLERQENILRSKLYA 418
Query: 640 --------LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
++ ADV+C TC+ + L I F + +DE+ +TEP ++P++ G++ L
Sbjct: 419 VRQEMLHDIVAQADVVCTTCITSASAALRIIDFPVVFLDEASMSTEPASLIPIMKGSRHL 478
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFF 750
L+GDH QL PV+ ++A GL SLFERL G P L++QYRMHP +S+FPS F
Sbjct: 479 ALIGDHKQLPPVITSREAQVKGLGISLFERLTEEGDVPSIMLDLQYRMHPSISRFPSEEF 538
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPD----------KPMLFYVTQGQEEIAGSGTSYVN 800
Y SL +G + P P +P + +V +E + S VN
Sbjct: 539 YNFSLLDGTVDASGNVRSSLLP-PTSSHLVLDPNTGKRPSVVFVDHSGQE-SSRDRSKVN 596
Query: 801 RTEASNVEKITTRFIRCG--MKPEQIGVITPYEGQRAFLVQHMQYQ-------------- 844
EA V KI + +K E IG+I PY Q + L + +
Sbjct: 597 WEEAGIVVKIVEDLLLSNPDLKGENIGIIAPYVAQISLLTRFLHTSTSSPSPSTSSPWST 656
Query: 845 ------GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
GS IE+ +VD F+GREKD+II S VR+ND IGFL D RRLNV LT
Sbjct: 657 HLLSTLGSHRCMQLPSIEIKTVDGFEGREKDIIIFSTVRNNDLGQIGFLADRRRLNVGLT 716
Query: 899 RAKYGIIVIGNPKVL 913
RAK G+ V+G+ + L
Sbjct: 717 RAKRGLFVVGSLRTL 731
>gi|307102593|gb|EFN50864.1| hypothetical protein CHLNCDRAFT_59413 [Chlorella variabilis]
Length = 762
Score = 229 bits (585), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 233/452 (51%), Gaps = 53/452 (11%)
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT-GS--------PVLVCAP 556
N SQV AV ++ R +L QGPPGTGKT T V +V+ GS +L A
Sbjct: 320 NESQVRAVAASLTRTFTLWQGPPGTGKTRTLLAFVEVMVRAVEGSVVRRHAQGAILAVAD 379
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
+N A D L + + G++ VRV ++ +R ++ L+ L+Q
Sbjct: 380 TNAAADNLLDGLLARGIRAVRVGQPAK---------------VRPELRHACLEALVQ--- 421
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
S+ +R L+ A+ L V+ TC GAGD RL F +++DE QAT
Sbjct: 422 -----STPSGQRAARLRAGADVFL---QQVVVATCNGAGDARLEAQCFRIVVLDECAQAT 473
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRPFRLEVQ 735
EP +VP++ GA+ +++ GD QL P V+ ++A L LF RL+ G+ LEVQ
Sbjct: 474 EPSSLVPLVKGAQCVVMAGDQRQLPPTVVSERAKEMYHLDVPLFTRLLEGGVSSRLLEVQ 533
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGS 794
YRMHP +S+FPS FY G +Q+GV +R + PW P P+LF + +G E+ A +
Sbjct: 534 YRMHPAISEFPSRHFYSGRVQSGVTQQDRPPVR-GVPWTNPACPVLFINIAEGSEQQALA 592
Query: 795 GTS------------YVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
G + Y N EA K R ++ + I +++PY GQ L+ +
Sbjct: 593 GNNRRGGSGDSSGASYSNSEEAEVAMKALQRVLQEDDSVQSIVLLSPYNGQ-VRLLTSLL 651
Query: 843 YQGSLP--AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
+ LP A +I V++VD +QGRE D++I S VRSN +GFL+D RRLNVA+TRA
Sbjct: 652 SRAELPEGAADRCQITVSTVDGYQGRESDVVIFSTVRSNPAGRVGFLSDERRLNVAITRA 711
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
+ G+IV+GN L P W + + EQ+ L
Sbjct: 712 RRGLIVLGNQATLQHDPNWGAWMQWVAEQRRL 743
>gi|254167856|ref|ZP_04874705.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|197623147|gb|EDY35713.1| DNA helicase, putative [Aciduliprofundum boonei T469]
Length = 655
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 262/550 (47%), Gaps = 85/550 (15%)
Query: 440 TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 499
+ G +D +F RM AL+ +++ + LLG+ E+ C +
Sbjct: 121 SRGVRIDLYANDITFQRMLSALQSLKDENK---LRLRTLLLGNANPEL---CKVGIKLEN 174
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
L N Q AV+ I L LI GPPGTGKT T A + Q+VK+ G VL A SN+
Sbjct: 175 RRL---NNFQKKAVESLIGSELFLIHGPPGTGKTTTLAEGIIQMVKK-GYKVLATADSNV 230
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHN-----------QIRNMEMN 605
AVD L EK+ + VVRV +R I+ + ++ + +I NM
Sbjct: 231 AVDNLVEKLAHK-VNVVRVGHPARIGKSIIEHTLDYIVAQDIEYKKAMEIWEKIDNMRAE 289
Query: 606 SEL--KKLLQLKEETGE-----LSSADE---------------------------KRYRM 631
E K Q + G+ L++A K+ +
Sbjct: 290 QEKYKKPTPQWRRGMGDDEIVYLANASRSYRGVPVDIMKNMAQWIKIQRRIEEYVKKAKK 349
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
+++ K +L NADVIC T AG L + F ++IDE+ Q+ EP C++P+I G +
Sbjct: 350 MEEKVIKRVLKNADVICTTNSTAGSELLYDMDFDFVVIDEATQSIEPSCLIPMIKGDR-Y 408
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR-PFRLEVQYRMHPELSKFPSNFF 750
I+ GDH QL P +M KA L +LFER + L L VQYRM+ ++ KFPS F
Sbjct: 409 IMAGDHRQLPPTIMSYKAK--ALQLTLFERFIKLYPHLSITLRVQYRMNEKIMKFPSKLF 466
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPM----------LFYVTQG-QEEIAGSGTSYV 799
Y L R + + ++PM +F Q +EE TSY
Sbjct: 467 YNDLLIAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSIIVFLDMQNCKEEKRRGSTSYY 526
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
N EA V+ ++ G+K + IG+ITPY+ Q L + ++IE+ S
Sbjct: 527 NECEAGMVKDTVDCLLKIGLKEKHIGIITPYDDQVDLL-----------RSMIEDIEIKS 575
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VD FQGREKD+II+S VRSND IGFL+D RRLNVA+TRAK +I++GN K LS ++
Sbjct: 576 VDGFQGREKDVIIISFVRSNDKGDIGFLDDLRRLNVAITRAKRKLIMLGNAKTLSSNEVY 635
Query: 920 NNLLNFYKEQ 929
L+++ + +
Sbjct: 636 AKLIDYTRSE 645
>gi|408674036|ref|YP_006873784.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
gi|387855660|gb|AFK03757.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
Length = 634
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 163/544 (29%), Positives = 266/544 (48%), Gaps = 58/544 (10%)
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 481
G+ + + LK+ +D ++ S++ MQ AL+ + L G
Sbjct: 101 GNRLKITLKTDELPDFSRDGKLGIDLLFDDNSYEEMQSALKYAQEMANKPEGNLVKILTG 160
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIV 540
+ FR L ++P LN SQ A+ I L+++ GPPGTGKT T +
Sbjct: 161 EK--KPTFRTDL----HPISVPKLNDSQNNALNKIISANELAIVHGPPGTGKTTTLVQTI 214
Query: 541 YQLVKQTG--SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
++KQ +P+LV APSN AVD L+EK+ GL V+R+ +R + + L L N+
Sbjct: 215 KTIIKQENAKTPILVVAPSNTAVDLLSEKLSEEGLNVLRIGNPAR--VSERLMALTLDNK 272
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNA-------------- 644
+ + ++ K L + E ++ ++ + +++ K L D A
Sbjct: 273 MTDHQLMKNAKTLKKQANEYRNMAHKYKRSFGKAERDQRKLLFDEAHKIMKEVGNIEQYV 332
Query: 645 --------DVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGD 696
+I T VGA + + FH+++IDE+ QA EP C +P IL A+++I GD
Sbjct: 333 IDDVVTKTQIITATLVGANHYTIRNLSFHTVIIDEAGQALEPACWIP-ILKAQKVIFAGD 391
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSL 755
HCQL P + +AA+ GL+ +L E+ V L L E QYRM+ ++ S FY L
Sbjct: 392 HCQLPPTIKSNEAAKNGLNTTLLEKCVALHPEAVTLLEEQYRMNEQIMAHSSKVFYNNQL 451
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASN------ 806
+ ++ L V +KP+ F T G E++ GTS N EA+
Sbjct: 452 KAHASVAKQTLF-------VDEKPLHFIDTAGCSFDEKL--EGTSSTNPDEAAFLVKHLN 502
Query: 807 --VEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
VE++ +F I VI+PY+ Q + L + +++ L ++ I V ++D+FQ
Sbjct: 503 GFVEELKKKFSTANFP--SIAVISPYKQQISILKEQVEHAPEL-KEVLNNISVNTIDSFQ 559
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
G+E+D++ +S RSN IGFL+D RR+NVA+TRA+ +IVIG+ LS + ++
Sbjct: 560 GQERDIVYISLTRSNAEGAIGFLSDIRRMNVAMTRARKKLIVIGDSATLSSSNFYEEFIS 619
Query: 925 FYKE 928
+ +E
Sbjct: 620 YTQE 623
>gi|405355805|ref|ZP_11024917.1| hypothetical protein A176_1051 [Chondromyces apiculatus DSM 436]
gi|397091077|gb|EJJ21904.1| hypothetical protein A176_1051 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 639
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 249/520 (47%), Gaps = 53/520 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+D + ++DR++ L++ D+ + LLG+ R P+ F P
Sbjct: 125 LRLDVVPNDVTYDRLRAGLQRIKALDKGAERHKREVLLGNEPP----RFDKPREFE-PTR 179
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN Q A A+ L+ GPPGTGK+ A I Q V G +L A SN AV
Sbjct: 180 P-LNPEQQDATARALASEDFFLVHGPPGTGKSTVLAEIAAQAVAD-GQRLLCTAASNAAV 237
Query: 562 DQLTEKIHRTGLKVVRV------CAK------------------SREAIDSPVSFLALHN 597
D L + GL+ VRV A+ SRE D S L
Sbjct: 238 DHLLDLCLDKGLRAVRVGHPARVAARLQEHTLDIVVESHPDRVVSRELFDEAYSLLGYAR 297
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSA-DEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
+ RN + E + + T E DE R L++ A K++L NADVIC T
Sbjct: 298 RQRNQGRSRE--RFANARASTSEAKGMLDEAR--ALERKAVKAVLANADVICVTLSSLDS 353
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
L KF L+DE+ QATEP ++ L A ++IL GD QL P V+ ++AA+AGL
Sbjct: 354 GVLSGEKFDLALLDEATQATEPLALLG-FLRAPRVILAGDPQQLPPTVLSQEAAKAGLGV 412
Query: 717 SLFERLVV---LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
SLFERL+ G++ L QYRM+ + FPS Y G L+ +R L+++ P
Sbjct: 413 SLFERLLKDHGEGVKRM-LREQYRMNARIMAFPSREMYAGELRAHPSVADRALAEVLTPG 471
Query: 774 P-VPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
V P+LF T G +EE+ + S N EA VE + G+ P ++ VITP
Sbjct: 472 ADVDAPPVLFLDTAGKGFEEEVEPTTRSLFNPGEAGLVEARVRALLAAGLSPRELAVITP 531
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q L + ++ + ++EV +VDAFQGREKD II+S RSN +GFLND
Sbjct: 532 YSAQAHRLRERIE-------ALSPDVEVDTVDAFQGREKDAIIVSLTRSNGEGQLGFLND 584
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
RR+NVALTRA+ + V+G+ LS + + +E
Sbjct: 585 LRRMNVALTRARRHLFVVGDSATLSGHAFYARFVEGTQEH 624
>gi|325280121|ref|YP_004252663.1| helicase [Odoribacter splanchnicus DSM 20712]
gi|324311930|gb|ADY32483.1| putative helicase [Odoribacter splanchnicus DSM 20712]
Length = 627
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 174/517 (33%), Positives = 259/517 (50%), Gaps = 46/517 (8%)
Query: 436 PTEATTG-FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP 494
P TG V + TS+ M ALR+ A + +A + LLG L R P
Sbjct: 125 PELVVTGELGVQLYFDDTSYKTMFAALREVAEAKGNRTARLREVLLGKA--PALRRETGP 182
Query: 495 KHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
F P LN SQ AV + + ++++ GPPGTGKT T VY+ + + V+V
Sbjct: 183 VRF-----PWLNASQEKAVNQVLCAKEVAVVHGPPGTGKTTTLVEAVYETLHRENQ-VMV 236
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQ 613
A SN AVD + EK+ G+ V+R+ +R D ++F R E +S+ +L Q
Sbjct: 237 SAQSNTAVDWIAEKLVDRGIPVLRIGNPTR-VNDKMLAF----TYERRFEAHSDYPELWQ 291
Query: 614 LK----EETGEL-SSADEKRYRM-------------LKKNAEKSLLDNADVICCTCVGAG 655
++ E TG L S E R R+ L+ + L A VI CT VGA
Sbjct: 292 IRKTIREMTGRLRKSGREDRERLHNQLTKLRVRATGLEIRIDTELFTEARVIACTLVGAA 351
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L + +F S+ IDE+ QA E C + I A ++IL GDHCQL P + C +AAR GL
Sbjct: 352 SRVLERKRFSSLFIDEAAQAIEAACWI-AISRADRVILAGDHCQLPPTIKCIEAARGGLG 410
Query: 716 QSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
++L E++V+ L ++QYRMH ++ +FPS +FY L+ R + D P
Sbjct: 411 RTLLEKVVLHKPETVSLLKIQYRMHEDIMRFPSRWFYHDELEAAPEVKYRGILDFDTPVS 470
Query: 775 VPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN-VEKITTRFIRCGMK---PEQI--GVIT 828
D L QE+ GT +N EA V ++ R G++ E I GVI+
Sbjct: 471 WIDTSEL----DLQEKAVAEGTGRLNTGEAELLVRELKNYMERIGIRRILEEHIDFGVIS 526
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY Q +L +H+ + + I V +VD FQG+E+D+I++S VR+N+ IGFL
Sbjct: 527 PYRAQVHYL-RHLLKKEPFFRPCRRLITVHTVDGFQGQERDVIMISLVRANEKGQIGFLR 585
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
D RR+NVA+TRA+ ++++G L++ P + L +
Sbjct: 586 DLRRMNVAITRARMKLLILGEAVTLTRHPFYRELYEY 622
>gi|222623514|gb|EEE57646.1| hypothetical protein OsJ_08074 [Oryza sativa Japonica Group]
Length = 980
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 188/588 (31%), Positives = 286/588 (48%), Gaps = 76/588 (12%)
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAV 466
G + L L+S G PT FS F KS DR+Q + L++ +
Sbjct: 404 GCSITLALESRHGDPT-----FSRLF-GKSVRIDRIQGLADALTYERNLEALIILQRNGL 457
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD--------LNRSQVYAVKHAI- 517
+ S + L G N D + + + + PD L+ SQ+ A+ +
Sbjct: 458 QKSNASIGVVATLFGDNKDVMKMEQNHLTDWGESSAPDPRISERYALDASQLKALSLGLN 517
Query: 518 -QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV 576
+RP+ +IQGPPGTGKTV ++ + V+Q G VLV APSN AVD + E++ TGL +V
Sbjct: 518 KKRPVLIIQGPPGTGKTVLLTELIVRAVQQ-GENVLVTAPSNAAVDNMVERLSNTGLNIV 576
Query: 577 RVCAKSREAIDSPVSFLA------LHNQIRNMEM-NSELKKLLQLKEETGELSSADEKRY 629
RV +R + LA L + +E S+L+K L E L++ +
Sbjct: 577 RVGNPARISPSVASKSLAEIVNGRLEQFRKELERKRSDLRKDLSYCIEDDSLAAGIRQLL 636
Query: 630 RMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECM 681
+ L ++ EK L A V+ T GA DP + + F ++IDE+ QA EP C
Sbjct: 637 KQLGRDLEKKEKEMIREALSEAQVVLSTNTGAADPLIRRTCCFDLVIIDEAGQAIEPSCW 696
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMH 739
+P++ G K+ IL GDHCQL PV++ +KA GL +SL ER L G+ RL VQ+RM+
Sbjct: 697 IPILQG-KRCILAGDHCQLAPVILSRKALDGGLGKSLLERASSLHNGLLTTRLTVQHRMN 755
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSK---IDFPWPVPDKPMLFYVTQ---------G 787
++ + S Y G L++ + L+ + W + P+L T+
Sbjct: 756 DSIASWASKEMYHGLLKSSHSVASQTLADSPVVKATW-ITRCPLLLLDTRMPYGALDTGC 814
Query: 788 QEEIAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ-YQG 845
E+I SGT S+ N EA V + + CG+ P I V +PY Q L + ++ Y G
Sbjct: 815 GEQIDLSGTGSFYNDGEADIVTQHVLNLVHCGVSPTAIAVQSPYIAQVQLLRERLEEYPG 874
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
+EV+++D+FQGRE D +++S VRSN +GFL D RR+NVA+TRA +
Sbjct: 875 ------LSGVEVSTIDSFQGREADAVVISMVRSNPLGAVGFLGDSRRMNVAITRACRHVT 928
Query: 906 VIGNPKVLSKQPLWNNLLNF---YKEQKVLVEGPLNNLKESLILFSKP 950
V+ + + LL Y + K +V G L+ + S + FS+P
Sbjct: 929 VVCDTSTICHSTFLARLLRHIRRYGQVKHVVPGSLDGV--SGLGFSQP 974
>gi|392864810|gb|EAS30536.2| tRNA-splicing endonuclease [Coccidioides immitis RS]
Length = 2141
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 265/530 (50%), Gaps = 98/530 (18%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGS------------- 549
DLN +Q AVK A+ +LIQGPPG+GKT T +V L+ T S
Sbjct: 1295 DLNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKT 1354
Query: 550 ------PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKS--------REAIDSPVSFLAL 595
+LVCAPSN AVD+L + + G+K ++ A+ +AI++ V + L
Sbjct: 1355 ARTLAKKLLVCAPSNAAVDELVMRF-KEGVKTLQGRAQKISVLRLGRSDAINTNVLDVTL 1413
Query: 596 HNQI--------------RNME------------MNSELKKLLQLKEETGELSSADEKRY 629
++ R+++ N +++ Q + + L + E+ +
Sbjct: 1414 DERVNAKLSEIGQKNGSERDLQSLYTEHKDTSNKFNEIRERMDQCRAKAQALPAELEREF 1473
Query: 630 RMLKK---------------------NAE-------KSLLDNADVICCTCVGAGDP--RL 659
+LKK NAE + ++D A VIC T G+G +
Sbjct: 1474 DLLKKKKAQLSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMFQT 1533
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K+A+R QSLF
Sbjct: 1534 LSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLF 1593
Query: 720 ERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
R+ + L+ QYRMHPE+S+FPS FY+G LQ+G + ++ PW +
Sbjct: 1594 VRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIR----PWHNTEL 1649
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQ 833
P F+ QG A G S VN E ++ R ++ + +IG+ITPY+GQ
Sbjct: 1650 LGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQ 1709
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
L QH + I++ +E + DAFQGRE ++II SCVR+++H GIGFL D RR+
Sbjct: 1710 LRELKQH--FANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNH-GIGFLADIRRM 1766
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
NV LTRAK + V+GN + L++ W L+N +E+++ +G + + +S
Sbjct: 1767 NVGLTRAKSSLWVLGNSQSLARGEFWRGLINDARERQLYTDGDVYKILQS 1816
>gi|119181373|ref|XP_001241901.1| hypothetical protein CIMG_05797 [Coccidioides immitis RS]
Length = 2066
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 170/530 (32%), Positives = 265/530 (50%), Gaps = 98/530 (18%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGS------------- 549
DLN +Q AVK A+ +LIQGPPG+GKT T +V L+ T S
Sbjct: 1220 DLNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKT 1279
Query: 550 ------PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKS--------REAIDSPVSFLAL 595
+LVCAPSN AVD+L + + G+K ++ A+ +AI++ V + L
Sbjct: 1280 ARTLAKKLLVCAPSNAAVDELVMRF-KEGVKTLQGRAQKISVLRLGRSDAINTNVLDVTL 1338
Query: 596 HNQI--------------RNME------------MNSELKKLLQLKEETGELSSADEKRY 629
++ R+++ N +++ Q + + L + E+ +
Sbjct: 1339 DERVNAKLSEIGQKNGSERDLQSLYTEHKDTSNKFNEIRERMDQCRAKAQALPAELEREF 1398
Query: 630 RMLKK---------------------NAE-------KSLLDNADVICCTCVGAGDP--RL 659
+LKK NAE + ++D A VIC T G+G +
Sbjct: 1399 DLLKKKKAQLSQAIDSARDKNQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMFQT 1458
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K+A+R QSLF
Sbjct: 1459 LSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLF 1518
Query: 720 ERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
R+ + L+ QYRMHPE+S+FPS FY+G LQ+G + ++ PW +
Sbjct: 1519 VRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPAMAKLRIR----PWHNTEL 1574
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQ 833
P F+ QG A G S VN E ++ R ++ + +IG+ITPY+GQ
Sbjct: 1575 LGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQ 1634
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
L QH + I++ +E + DAFQGRE ++II SCVR+++H GIGFL D RR+
Sbjct: 1635 LRELKQH--FANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNH-GIGFLADIRRM 1691
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
NV LTRAK + V+GN + L++ W L+N +E+++ +G + + +S
Sbjct: 1692 NVGLTRAKSSLWVLGNSQSLARGEFWRGLINDARERQLYTDGDVYKILQS 1741
>gi|303318509|ref|XP_003069254.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108940|gb|EER27109.1| Zinc knuckle domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 2141
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 262/530 (49%), Gaps = 98/530 (18%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGS------------- 549
DLN +Q AVK A+ +LIQGPPG+GKT T +V L+ T S
Sbjct: 1295 DLNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKT 1354
Query: 550 ------PVLVCAPSNIAVDQLTEKIHRTGLKVV--------------------------- 576
+LVCAPSN AVD+L + + G+K +
Sbjct: 1355 ARTLAKKLLVCAPSNAAVDELVMRF-KEGVKTLQGRAQKISVLRLGRSDAINTNVLDVTL 1413
Query: 577 --RVCAKSREAIDSPVSFLALH-------------NQIRN---------MEMNSELKKLL 612
RV AK E S LH N+IR + +EL++
Sbjct: 1414 DERVNAKLSEIGQKNGSERDLHSLYTEHKDSSNKFNEIRERMDQCRAKAQGLPAELEREF 1473
Query: 613 QL-KEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGDP--RL 659
L K++ +LS A D R + + ++ ++ ++D A VIC T G+G +
Sbjct: 1474 DLLKKKKAQLSQAIDSARDKSQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMFQT 1533
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K+A+R QSLF
Sbjct: 1534 LSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLF 1593
Query: 720 ERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
R+ + L+ QYRMHPE+S+FPS FY+G LQ+G + ++ PW +
Sbjct: 1594 VRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAKLRIR----PWHSTEL 1649
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQ 833
P F+ QG A G S VN E ++ R ++ + +IG+ITPY+GQ
Sbjct: 1650 LGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAGKIGIITPYKGQ 1709
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
L QH + I++ +E + DAFQGRE ++II SCVR+++H GIGFL D RR+
Sbjct: 1710 LRELKQH--FANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNH-GIGFLADIRRM 1766
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
NV LTRAK + V+GN + L++ W L+N +E+++ +G + + +S
Sbjct: 1767 NVGLTRAKSSLWVLGNSQSLARGEFWRGLINDARERQLYTDGDVYKILQS 1816
>gi|426193612|gb|EKV43545.1| hypothetical protein AGABI2DRAFT_210326 [Agaricus bisporus var.
bisporus H97]
Length = 927
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 253/485 (52%), Gaps = 74/485 (15%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV--YQLVKQTGSPVLVCAPS 557
P+ LN+SQ+ A+ I + +SL+QGPPGTGKT T + +L + P+LVC +
Sbjct: 374 PDFKHLNKSQIKAMATMIGKRISLVQGPPGTGKTKTIVETIKLLKLHFEVSHPILVCTYT 433
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQIRNMEMNSELKKLLQL 614
N+AVD L E + GLK +RV SR + + L L + ++ + + + + L ++
Sbjct: 434 NVAVDNLLEGFAKAGLKPLRVGFGSRIRASLQEYSLDHLLLKHPLQPLLLET-IALLDKM 492
Query: 615 KEETGEL----------------SSADEKRYRML---------KKNAEKS---------- 639
+EE G+L S+A E+R R + ++N ++
Sbjct: 493 EEEIGQLGALIRDTLKKIEGKTPSAAMEQRVRNMSQAMGMKDRRRNELRAKKYGLQQEML 552
Query: 640 --LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
++ +ADV+C TC+ + L F + +DE+ +TEP ++P++ G++ L L+GDH
Sbjct: 553 HDIVKSADVVCSTCITSASSALNVADFPVVFVDEASMSTEPATLIPIMKGSRHLALIGDH 612
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQ 756
QL PV++ ++A GL+ SLFERL GI P L++QYRMHP +S FPS FY S+Q
Sbjct: 613 KQLPPVIVSQEARAQGLAVSLFERLTEEGIVPSVMLDIQYRMHPRISHFPSLEFYNSSIQ 672
Query: 757 NGVC-ADERKLSKIDFPWPVP-------------DKPMLFYVTQ-GQEEIAGSGTSYVNR 801
+G D + ++ P + +P + ++ G E + SG S VN
Sbjct: 673 DGTTDKDGNVVVGLEPPMSLTHLLQDGNHEGQSRSRPSVIFLDHFGYETM--SGRSRVNH 730
Query: 802 TEASNVEKITTRFI--RCGMKPEQIGVITPYEGQRAFLVQHM--------QYQGSLPAKI 851
EA V + + ++ + IG+I PY Q L + + +++ L +
Sbjct: 731 HEAQIVVSLVEDLLLQNPQLRGQDIGIIAPYVAQINLLNRLLTTDVRNGERFREVLGNQR 790
Query: 852 YQ---EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
Y+ ++EV +VD F+GREK++I+ S VR+ND IGFL D RRLNV LTRAK G+ V+G
Sbjct: 791 YRDMSDVEVKTVDGFEGREKEVIVFSTVRNNDSGRIGFLADRRRLNVGLTRAKRGLFVVG 850
Query: 909 NPKVL 913
+ +
Sbjct: 851 GMRTI 855
>gi|366999404|ref|XP_003684438.1| hypothetical protein TPHA_0B03320 [Tetrapisispora phaffii CBS 4417]
gi|357522734|emb|CCE62004.1| hypothetical protein TPHA_0B03320 [Tetrapisispora phaffii CBS 4417]
Length = 1133
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 248/486 (51%), Gaps = 72/486 (14%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
LN SQ A++H + ++++QGPPGTGKT T I+ Q++K S P+L A SNIA+D
Sbjct: 655 LNDSQKSAIQHVLNNSITILQGPPGTGKTSTIEEIILQMIKNFNSFPILCVAASNIAIDN 714
Query: 564 LTEKI--HRTGLKVVRVCAKSRE---AIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
+ EK+ + +K++R+ ++ +E D P+ + LHN + + + + L++++ +
Sbjct: 715 IAEKLLESKPDIKILRILSEGKEQQYGKDHPLGKICLHNIVNDQLSENGIDTLIKVR--S 772
Query: 619 GELSSADEKRYRML---KKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQ 674
G + + + L + N + A ++ T + AG +L IK +++DE+ Q
Sbjct: 773 GRIKDVSKNQLNKLMTEQNNISDRYVSQAQILLTTNIAAGGRQLKSIKEVPVVIMDEATQ 832
Query: 675 ATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFR 731
++E +VP+ L G + + VGD QL + L SLFER+++ G P
Sbjct: 833 SSEMSTLVPLSLPGIRTFVFVGDEKQLSSF-----SNVPQLEMSLFERILLNGSYKNPHM 887
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEE 790
L+ QYRMHP++S+FP FY+ L +GV +++K WP + P+ F+ +G E
Sbjct: 888 LDTQYRMHPQISRFPIEKFYDNKLLDGVTEEQKK-------WPGIEHPLYFHQCDKGLEN 940
Query: 791 I------AGSGTSYVNRTEASNVEKITTRFIRCGMKPE-QIGVITPYEGQRAFLVQHMQ- 842
G +Y N+ E + K R I P +IG+ITPY QR + + +Q
Sbjct: 941 KVFNYNRGSRGFTYTNKHEVKEIVKFIYRLILEKNVPRTEIGIITPYSAQRDLISETLQK 1000
Query: 843 --------------------YQGSLPAK---------------IYQEIEVASVDAFQGRE 867
L AK I + ++++D+FQG E
Sbjct: 1001 DLVVNPERLEMEREVDDLDLLNSRLRAKTSGLSNDGNKVNTINIINGVFISTIDSFQGHE 1060
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP-LWNNLLNFY 926
K II SCVR+N IGF++D RR+NVALTRAK+G+I+IGN +L K LW + +++
Sbjct: 1061 KGFIIFSCVRNNKENKIGFVSDKRRMNVALTRAKHGLIMIGNKNILKKDTKLWASYIDYL 1120
Query: 927 KEQKVL 932
++ ++
Sbjct: 1121 EKHNLI 1126
>gi|320036907|gb|EFW18845.1| tRNA-splicing endonuclease [Coccidioides posadasii str. Silveira]
Length = 1086
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 262/534 (49%), Gaps = 106/534 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGS------------- 549
DLN +Q AVK A+ +LIQGPPG+GKT T +V L+ T S
Sbjct: 240 DLNLAQAKAVKSAMDNDAFTLIQGPPGSGKTKTIVALVGALLTPTLSEHRIAPPRPGDKT 299
Query: 550 ------PVLVCAPSNIAVDQLTEKIHRTGLKVV--------------------------- 576
+LVCAPSN AVD+L + + G+K +
Sbjct: 300 ARTLAKKLLVCAPSNAAVDELVMRF-KEGVKTLQGRAQKISVLRLGRSDAINTNVLDVTL 358
Query: 577 --RVCAKSREAIDSPVSFLALH-------------NQIRN---------MEMNSELKKLL 612
RV AK E S LH N+IR + +EL++
Sbjct: 359 DERVNAKLSEIGQKNGSERDLHSLYTEHKDSSNKFNEIRERMDQCRAKAQGLPAELEREF 418
Query: 613 QL-KEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGDP--RL 659
L K++ +LS A D R + + ++ ++ ++D A VIC T G+G +
Sbjct: 419 DLLKKKKAQLSQAIDSARDKSQAAARNAELTRRKIQQEIIDEAHVICATLSGSGHEMFQT 478
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K+A+R QSLF
Sbjct: 479 LSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYEQSLF 538
Query: 720 ERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
R+ + L+ QYRMHPE+S+FPS FY+G LQ+G + ++ PW +
Sbjct: 539 VRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPSMAKLRIR----PWHSTEL 594
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-------CGMKPEQIGVITP 829
P F+ QG A G S VN E ++ R ++ G +IG+ITP
Sbjct: 595 LGPYRFFDVQGMHASAPKGHSLVNMAELRVAMRLYDRLVQDFPTYDFAG----KIGIITP 650
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y+GQ L QH + I++ +E + DAFQGRE ++II SCVR+++H GIGFL D
Sbjct: 651 YKGQLRELKQH--FANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASNH-GIGFLAD 707
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
RR+NV LTRAK + V+GN + L++ W L+N +E+++ +G + + +S
Sbjct: 708 IRRMNVGLTRAKSSLWVLGNSQSLARGEFWRGLINDARERQLYTDGDVYKILQS 761
>gi|345513474|ref|ZP_08792995.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
gi|229437375|gb|EEO47452.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
Length = 630
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 245/457 (53%), Gaps = 44/457 (9%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN SQ AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R ++ + F R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR--VNDKMLFFTYE---RRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL S K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYSRSRKGAERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+F ++ IDE+ QA EP C + I A +++L GDHCQL P + C +AAR GL Q+L
Sbjct: 358 TGRRFGTLFIDEAAQALEPACWI-AIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLM 416
Query: 720 ERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
+ +V L +VQYRM+ E+ F S +FY+G L++ R + +D+ D
Sbjct: 417 QEIVQNKPETVSLLKVQYRMNDEIMHFSSEWFYQGELKSAPEVKYRGI--LDY-----DT 469
Query: 779 PMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--GVITP 829
P+ + T+G EE G +N+ EA+ ++ ++T + G + E+I G+I+P
Sbjct: 470 PIEWVNTEGMNCNEEFVGESFGRINKAEAALSISQLTHYINKIGKERFLEERIDVGLISP 529
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Y+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGFLN
Sbjct: 530 YKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLN 587
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
D RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 588 DLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|237708745|ref|ZP_04539226.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|423228836|ref|ZP_17215242.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
gi|423247648|ref|ZP_17228696.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|229457171|gb|EEO62892.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392631541|gb|EIY25512.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei
CL02T12C06]
gi|392635575|gb|EIY29474.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei
CL02T00C15]
Length = 630
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 245/457 (53%), Gaps = 44/457 (9%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN SQ AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D +SF R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLSF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL S K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYSRSRKGAERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+F ++ IDE+ QA EP C + I A +++L GDHCQL P + C +AAR GL Q+L
Sbjct: 358 TGRRFGTLFIDEAAQALEPACWI-AIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLM 416
Query: 720 ERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
+ +V L +VQYRM+ E+ F S +FY+G L++ R + +D+ D
Sbjct: 417 QEIVQNKPETVSLLKVQYRMNDEIMHFSSEWFYQGELKSAPEVKYRGI--LDY-----DT 469
Query: 779 PMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--GVITP 829
P+ + T+G EE G +N+ EA+ ++ ++T + G + E+I G+I+P
Sbjct: 470 PIEWVNTEGMNYNEEFVGESFGRINKAEAALSISQLTHYINKIGKERFLEERIDVGLISP 529
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Y+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGFLN
Sbjct: 530 YKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLN 587
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
D RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 588 DLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|212693586|ref|ZP_03301714.1| hypothetical protein BACDOR_03103 [Bacteroides dorei DSM 17855]
gi|212663839|gb|EEB24413.1| putative DNA helicase [Bacteroides dorei DSM 17855]
Length = 630
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 245/457 (53%), Gaps = 44/457 (9%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN SQ AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D +SF R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGIPVLRIGNPTR-VNDKMLSF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL S K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYSRSRKGAERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+F ++ IDE+ QA EP C + I A +++L GDHCQL P + C +AAR GL Q+L
Sbjct: 358 TGRRFGTLFIDEAAQALEPACWI-AIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLM 416
Query: 720 ERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
+ +V L +VQYRM+ E+ F S +FY+G L++ R + +D+ D
Sbjct: 417 QEIVQNKPETVSLLKVQYRMNDEIMHFSSEWFYQGELKSAPEVKYRGI--LDY-----DT 469
Query: 779 PMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--GVITP 829
P+ + T+G EE G +N+ EA+ ++ ++T + G + E+I G+I+P
Sbjct: 470 PIEWVNTEGMNCNEEFVGESFGRINKAEAALSISQLTHYINKIGKERFLEERIDVGLISP 529
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Y+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGFLN
Sbjct: 530 YKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLN 587
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
D RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 588 DLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|265755988|ref|ZP_06090455.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423242331|ref|ZP_17223440.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
gi|263234066|gb|EEZ19667.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392639617|gb|EIY33433.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei
CL03T12C01]
Length = 630
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 245/457 (53%), Gaps = 44/457 (9%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN SQ AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D +SF R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLSF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL S K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYSRSRKGAERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+F ++ IDE+ QA EP C + I A +++L GDHCQL P + C +AAR GL Q+L
Sbjct: 358 TGRRFGTLFIDEAAQALEPACWI-AIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLM 416
Query: 720 ERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
+ +V L +VQYRM+ E+ F S +FY+G L++ R + +D+ D
Sbjct: 417 QEIVQNKPETVSLLKVQYRMNDEIMHFSSEWFYQGELKSAPEVKYRGI--LDY-----DT 469
Query: 779 PMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--GVITP 829
P+ + T+G EE G +N+ EA+ ++ ++T + G + E+I G+I+P
Sbjct: 470 PIEWVNTEGMNCNEEFVGESFGRINKAEAALSISQLTHYINKIGKERFLEERIDVGLISP 529
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Y+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGFLN
Sbjct: 530 YKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEDGQIGFLN 587
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
D RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 588 DLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|82596421|ref|XP_726255.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481586|gb|EAA17820.1| nam7 protein [Plasmodium yoelii yoelii]
Length = 1791
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 219/424 (51%), Gaps = 27/424 (6%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNI 559
NLP LN SQ A A+ R L+L+QGPPGTGKT + I+ +Q S +L A SN+
Sbjct: 1283 NLP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHRQNSSKKILAVADSNV 1341
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
A + L E + + ++ VRV A S DS A+ ME + K LL+L++
Sbjct: 1342 AANNLVEGLKKRNIQAVRVGAGS----DSDFHEEAI------MEFH-RYKDLLKLRKNNM 1390
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
+ K +++K + +V+ TCVG+G KF ++IDE Q+ EP
Sbjct: 1391 Q------KEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPS 1444
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRM 738
++P+ L+L+GDH QL P ++ A + GL +SL ER V+ I P L Q RM
Sbjct: 1445 NLIPLGHYCTNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPIHLLSTQRRM 1504
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ----GQEEIAGS 794
H + FP+ FY+ L+ +E + F WP P ++F G +
Sbjct: 1505 HLSICTFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCRLVFIDVSLGKPGSKFENAY 1564
Query: 795 GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
GTS N E + + + G + ++IG++T Y+ Q+ L + +Q + P +
Sbjct: 1565 GTSKFNLYEIEPLIAVLKSIVNEGCVSVDEIGILTAYDAQKIKLKKAVQ--ETFPYEAAH 1622
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
IE+ S+D FQG+EKDLI+ S VRSN + +GFL D RRLNV LTRAK G+I+ G+ L
Sbjct: 1623 RIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVIIFGDQFTL 1682
Query: 914 SKQP 917
+ P
Sbjct: 1683 ANDP 1686
>gi|160889253|ref|ZP_02070256.1| hypothetical protein BACUNI_01675 [Bacteroides uniformis ATCC 8492]
gi|156861260|gb|EDO54691.1| putative DNA helicase [Bacteroides uniformis ATCC 8492]
Length = 637
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 272/559 (48%), Gaps = 56/559 (10%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGL-ELKSSAGAPTEA--TTGFSVDFIWKSTSF 454
R S D T+ + ++ DE + + AGA E T V + TS+
Sbjct: 97 FRQSADGKITYMNFTATV----SYADETRMVAIMPGAGAVMEVQETDNLGVQLYFDETSY 152
Query: 455 DRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK 514
M AL + A + LLG + FR P F P LN +Q AV
Sbjct: 153 RTMFEALEDTLRSKGNRLAELRDILLG--TSKAGFRELYPVRF-----PWLNSTQETAVN 205
Query: 515 HAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
+ R ++++ GPPGTGKT T +Y+ + + VLVCA SN AVD ++EK+ G+
Sbjct: 206 KVLCARDVAIVHGPPGTGKTTTLVEAIYETLHRE-PQVLVCAQSNTAVDWISEKLVDRGV 264
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS---SADEK--- 627
V+R+ +R D +SF + N + EL + + E G + S DE+
Sbjct: 265 NVLRIGNPTR-VNDKMLSF-TYERRFENHPLYPELWSIRKNLRELGSRARRGSYDEREGV 322
Query: 628 RYRM---------LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
R RM L+ L D A VI T V + L +F ++ IDE+ QA E
Sbjct: 323 RSRMSRLRDRATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQALEA 382
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-----VLGIRPFRLE 733
C + I A +++L GDHCQL P + C +AAR GL ++L E++V V+ + L+
Sbjct: 383 ACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVSNKPAVVSL----LK 437
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
VQYRMH E+ KFPS +FY G L+ R + D P D + + +EE G
Sbjct: 438 VQYRMHEEIMKFPSQWFYNGELEAASEVRYRGILDWDTPIHWIDTSEMDF----KEEFVG 493
Query: 794 SGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQHMQYQGSL 847
+N+ EA S ++ R + E+I G+I+PY+ Q +L ++ SL
Sbjct: 494 ETFGRINKAEADLLLSELKIYINRISGNRILEEKIDFGIISPYKAQVQYLRNKIKADASL 553
Query: 848 PAKIYQEI-EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
K Y+ + V +VD FQG+E+D+I +S VR+N+ IGFLND RR+NVA+TRA+ +++
Sbjct: 554 --KPYRSLFTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVI 611
Query: 907 IGNPKVLSKQPLWNNLLNF 925
+G + L + LL F
Sbjct: 612 LGEAETLKHHGFYRKLLEF 630
>gi|409074520|gb|EKM74916.1| hypothetical protein AGABI1DRAFT_123471 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 937
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 247/484 (51%), Gaps = 72/484 (14%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV--YQLVKQTGSPVLVCAPS 557
P+ LN+SQ+ A+ I + +SL+QGPPGTGKT T + +L + P+LVC +
Sbjct: 384 PDFKHLNKSQIKAMATMIGKRISLVQGPPGTGKTKTIVETIKLLKLHFEVSHPILVCTYT 443
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR------------EAIDSPVSFLALHNQIRNMEMN 605
N+AVD L E + GLK +RV SR + P+ L L +M
Sbjct: 444 NVAVDNLLEGFAKAGLKPLRVGFGSRIRASLQEYSLDHLLLKHPLQPLLLETIALLDKME 503
Query: 606 SELKKLLQL------KEETGELSSADEKRYRML---------KKNAEKS----------- 639
E+ +L L K E S+A E+R R + ++N ++
Sbjct: 504 EEISQLGALIRDTLKKIEGKTPSAAMEQRVRNMSQAMGMKDRRRNELRAKKYGLQQEMLH 563
Query: 640 -LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
++ +ADV+C TC+ + L F + +DE+ +TEP ++P++ G++ L L+GDH
Sbjct: 564 DIVKSADVVCSTCITSASSALNVADFPVVFVDEASMSTEPATLIPIMKGSRHLALIGDHK 623
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QL PV++ ++A GL+ SLFERL GI P L++QYRMHP +S FPS FY S+Q+
Sbjct: 624 QLPPVIVSQEARAQGLAVSLFERLTEEGIVPSVMLDIQYRMHPRISHFPSLEFYNSSIQD 683
Query: 758 GVC-ADERKLSKIDFPWPVP-------------DKPMLFYVTQ-GQEEIAGSGTSYVNRT 802
G D + ++ P + +P + ++ G E + SG S VN
Sbjct: 684 GTTDKDGNVVVGLEPPMSLTHLLQDGNHEGQSRSRPSVIFLDHFGYETM--SGRSRVNHH 741
Query: 803 EASNVEKITTRFI--RCGMKPEQIGVITPYEGQRAFLVQHM--------QYQGSLPAKIY 852
EA V + + ++ + IG+I PY Q L + + +++ L + Y
Sbjct: 742 EAQIVVSLVEDLLLQNPQLRGQDIGIIAPYVAQINLLNRLLTTDVRNGERFREVLGNQRY 801
Query: 853 Q---EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+ ++EV +VD F+GREK++I+ S VR+ND IGFL D RRLNV LTRAK G+ V+G
Sbjct: 802 RDMSDVEVKTVDGFEGREKEVIVFSTVRNNDSGRIGFLADRRRLNVGLTRAKRGLFVVGG 861
Query: 910 PKVL 913
+ +
Sbjct: 862 MRTI 865
>gi|328851436|gb|EGG00591.1| hypothetical protein MELLADRAFT_118002 [Melampsora larici-populina
98AG31]
Length = 1001
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 227/466 (48%), Gaps = 65/466 (13%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---QTGSPVLVCAP 556
P+L LN Q A+ AI PLSLIQGPPGTGKT T +V L+K Q P+ VCAP
Sbjct: 499 PDLGHLNEPQTRAIAMAISSPLSLIQGPPGTGKTQTIIQMV-ALLKIHFQVSQPIAVCAP 557
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
++++VD L + + GLK VR C + + + + +E+ L + K
Sbjct: 558 THVSVDNLVLGLVKAGLKPVR-CGEHLKVASEVAQY-----SLETLELQHSLTPTIDAKN 611
Query: 617 ETGELSSAD----EKRYR------------------------------------MLKKNA 636
E + D EKR+R +LK+
Sbjct: 612 RRLESLTKDLDAIEKRWRNVKPAVSSKRQPANTKQARVLEILKTEYKRLLYEVYILKRRR 671
Query: 637 EKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGD 696
+ ++ ++DV+CCTC+GAG L ++F S++IDE+ EP +VP+ G+ +LVGD
Sbjct: 672 QLQIIASSDVVCCTCLGAGASGLEAVEFASVIIDEAAMCHEPTALVPLTKGSAHAVLVGD 731
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERL-VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSL 755
H QL + + A G SLFER+ ++ L QYRM+P +S FP+ FY+ +L
Sbjct: 732 HKQLPAITLSPAAEAHGFGISLFERIQSQQSVQSILLHKQYRMNPIISAFPNAEFYDHAL 791
Query: 756 QNGVCADERKLSKIDFPW---PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITT 812
+ + D K F P + +VT E T N+TEA V I
Sbjct: 792 VDSIKPDSIKPVYFHFDRSLGPEQKSRAVSFVTHNHLETKIEKT-LTNQTEAEIVLGILR 850
Query: 813 RFIRCG--MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI-------YQEIEVASVDAF 863
+R + IG+I PY GQ + L+Q +Q Q + I E+E+ +VD F
Sbjct: 851 DLLRTNPELSGRDIGIIAPYRGQVS-LLQSLQRQPQKASLIRNSEQSYRNEVEINTVDGF 909
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
QGREK +II+SCVR N + IGFL D RR NVA TRAK IV+G+
Sbjct: 910 QGREKPVIILSCVRGNFERQIGFLADLRRFNVAATRAKQKFIVVGH 955
>gi|68076201|ref|XP_680020.1| erythrocyte membrane-associated antigen [Plasmodium berghei strain
ANKA]
gi|56500887|emb|CAI00225.1| erythrocyte membrane-associated antigen, putative [Plasmodium
berghei]
Length = 1480
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 219/424 (51%), Gaps = 27/424 (6%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNI 559
NLP LN SQ A A+ R L+L+QGPPGTGKT + I+ +Q S +L A SN+
Sbjct: 973 NLP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHRQNSSKKILAVADSNV 1031
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
A + L E + + ++ VRV A S DS A+ ME + K LL+L++
Sbjct: 1032 AANNLVEGLKKRNIQAVRVGAGS----DSDFHEEAI------MEFH-RYKDLLKLRKNNM 1080
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
+ K +++K + +V+ TCVG+G KF ++IDE Q+ EP
Sbjct: 1081 Q------KEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPS 1134
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRM 738
++P+ L+L+GDH QL P ++ A + GL +SL ER V+ I P L Q RM
Sbjct: 1135 NLIPLGHYCTNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPIHLLSTQRRM 1194
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ----GQEEIAGS 794
H + FP+ FY+ L+ +E + F WP P ++F G +
Sbjct: 1195 HLSICTFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCRLVFIDVSLGKPGSKFENAY 1254
Query: 795 GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
GTS N E + + + G + ++IG++T Y+ Q+ L + +Q + P +
Sbjct: 1255 GTSKFNLYEIEPLIAVLKSIVNEGCVSVDEIGILTAYDAQKIKLKKAVQ--ETFPYEAAH 1312
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
IE+ S+D FQG+EKDLI+ S VRSN + +GFL D RRLNV LTRAK G+I+ G+ L
Sbjct: 1313 RIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVIIFGDQFTL 1372
Query: 914 SKQP 917
+ P
Sbjct: 1373 ANDP 1376
>gi|384484388|gb|EIE76568.1| hypothetical protein RO3G_01272 [Rhizopus delemar RA 99-880]
Length = 1809
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 172/512 (33%), Positives = 261/512 (50%), Gaps = 93/512 (18%)
Query: 504 DLNRSQVYAVKHAIQRP--LSLIQGPPGTGKTVTSATIVYQLV--KQTGSPVLVCAPSNI 559
++N Q A+ AIQ+ SLIQGPPGTGKT T ++ L+ +Q S +LVCAPSN
Sbjct: 1140 NVNEPQAEAIASAIQKKKGFSLIQGPPGTGKTKTILALIVSLLDQRQGYSKLLVCAPSNA 1199
Query: 560 AVDQLTEKIHR-----TGLK---VVR------VCAKSREAI---------------DSPV 590
AVD++T+++ G+K VVR V A ++ I D+ +
Sbjct: 1200 AVDEITKRLKEGVMTAQGIKKPNVVRIGVADSVNASVKDRILDRLIEAEMEAKIGNDATM 1259
Query: 591 SFLA-----LHNQIRNMEMN------------SELKKLLQLKEETGELSSA--------- 624
S + LH++IRN+++ S++ ++ L+ + L +
Sbjct: 1260 SKMGARLDTLHSEIRNLQIGLDDVDREITQAGSDMVQMSILRSKRKALGAKLTKAKMALR 1319
Query: 625 ----DEKRY----RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI--KFHSILIDESMQ 674
D+K Y + + A + + NADV+C T G+G L + F ++++DE+ Q
Sbjct: 1320 EAYQDQKNYGQEMEVSRVRARQKVFANADVVCATLSGSGHDMLTSMGASFETVIVDEAAQ 1379
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL-VVLGIRPFRLE 733
+ E ++P+ ++ ILVGD QL P VM AA+ QSLF RL +G L
Sbjct: 1380 SIEISSLIPLKFDTQRCILVGDPNQLPPTVMSTVAAKYDYQQSLFMRLEKTVGKEVNLLS 1439
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI------DFPWPVPDKPMLFY-VTQ 786
+QYRMHPE+S FPS FY+ LQ+G D K+S +FP P FY V
Sbjct: 1440 IQYRMHPEISTFPSKLFYQSRLQDGPGMD--KISSAIWHALPEFP------PYCFYDVRD 1491
Query: 787 GQEEIAGSGTSYVNRTEASN----VEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
GQE++ G G S N EA V+ + T+ +IGVITPY+ Q L +
Sbjct: 1492 GQEKM-GRGKSIFNVAEADAAVCLVDLLLTKLPTIKFA-SKIGVITPYKQQVGQL--KAR 1547
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
+Q I I+ +VD FQG+EK+++I SCVR+ +GIGFL D RR+NV LTRAK
Sbjct: 1548 FQKRFGNGIVDAIDFNTVDGFQGQEKEIVIFSCVRAGSGRGIGFLADMRRMNVGLTRAKC 1607
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
+ V+G+ + LS+ W +L+ +++ ++ E
Sbjct: 1608 SLFVLGHARSLSRSEYWGDLVRDAEKRSLVRE 1639
>gi|317479605|ref|ZP_07938732.1| hypothetical protein HMPREF1007_01848 [Bacteroides sp. 4_1_36]
gi|316904267|gb|EFV26094.1| hypothetical protein HMPREF1007_01848 [Bacteroides sp. 4_1_36]
Length = 631
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 272/559 (48%), Gaps = 56/559 (10%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGL-ELKSSAGAPTEA--TTGFSVDFIWKSTSF 454
R S D T+ + ++ DE + + AGA E T V + TS+
Sbjct: 91 FRQSADGKITYMNFTATV----SYADETRMVAIMPGAGAVMEVQETDNLGVQLYFDETSY 146
Query: 455 DRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK 514
M AL + A + LLG + FR P F P LN +Q AV
Sbjct: 147 RTMFEALEDTLRSKGNRLAELRDILLG--TSKAGFRELYPVRF-----PWLNSTQETAVN 199
Query: 515 HAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
+ R ++++ GPPGTGKT T +Y+ + + VLVCA SN AVD ++EK+ G+
Sbjct: 200 KVLCARDVAIVHGPPGTGKTTTLVEAIYETLHRE-PQVLVCAQSNTAVDWISEKLVDRGV 258
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS---SADEK--- 627
V+R+ +R D +SF + N + EL + + E G + S DE+
Sbjct: 259 NVLRIGNPTR-VNDKMLSF-TYERRFENHPLYPELWSIRKNLRELGSRARRGSYDEREGV 316
Query: 628 RYRM---------LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
R RM L+ L D A VI T V + L +F ++ IDE+ QA E
Sbjct: 317 RSRMSRLRDRATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQALEA 376
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-----VLGIRPFRLE 733
C + I A +++L GDHCQL P + C +AAR GL ++L E++V V+ + L+
Sbjct: 377 ACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVSNKPAVVSL----LK 431
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
VQYRMH E+ KFPS +FY G L+ R + D P D + + +EE G
Sbjct: 432 VQYRMHEEIMKFPSQWFYNGELEAASEVRYRGILDWDTPIHWIDTSEMDF----KEEFVG 487
Query: 794 SGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQHMQYQGSL 847
+N+ EA S ++ R + E+I G+I+PY+ Q +L ++ SL
Sbjct: 488 ETFGRINKAEADLLLSELKIYINRISGNRILEEKIDFGIISPYKAQVQYLRNKIKADASL 547
Query: 848 PAKIYQEI-EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
K Y+ + V +VD FQG+E+D+I +S VR+N+ IGFLND RR+NVA+TRA+ +++
Sbjct: 548 --KPYRSLFTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVI 605
Query: 907 IGNPKVLSKQPLWNNLLNF 925
+G + L + LL F
Sbjct: 606 LGEAETLKHHGFYRKLLEF 624
>gi|110637960|ref|YP_678167.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
gi|110280641|gb|ABG58827.1| DNA helicase [Cytophaga hutchinsonii ATCC 33406]
Length = 611
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 187/571 (32%), Positives = 286/571 (50%), Gaps = 69/571 (12%)
Query: 389 RLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG-----------APT 437
R + D + YS D + +S H K ++F D V + +SAG AP
Sbjct: 49 RKYEADTPNIFYSGDKVRIFSNQQHNTK--EDFIDGV---ITASAGNLVTVQLMKDEAPD 103
Query: 438 EATTG-FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH 496
+ G +D ++ S++ M L +A DD I RL + E + ++
Sbjct: 104 WLSDGKIGMDKLFDKHSYETMLSTLDYWASDDGLTKDSI--RLRDVILGEKTASFNTKEN 161
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
++AP+ D+ + + + + AIQ + +++I GPPGTGKT T IV L+++ G VLVCA
Sbjct: 162 YAAPDKLDITQKKAW--EKAIQAQDVAIIHGPPGTGKTTTIVEIVKTLIEK-GERVLVCA 218
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN AVD LTE++ GL VVR+ S+ I L Q+ N E +K+L +
Sbjct: 219 SSNAAVDVLTERLAARGLPVVRLGNPSK--ITEQNLQYCLDRQVVNHEQFGLVKELKKRA 276
Query: 616 EETGELSSADEKRYRMLKKNAEKSLLDNA----------------------DVICCTCVG 653
EE +++ ++ + ++ K++L A V+ CT V
Sbjct: 277 EEFFRMANKYKRNFDREEREQRKAILKEARNLRGQADDHLHFLQQNVLVKNQVVTCTPVV 336
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
+ + K KF +++ DES Q EP C +P I K++IL GDH QL P V +AA+ G
Sbjct: 337 SMHREIGKEKFDTLIFDESGQTMEPMCWIP-IQKVKKVILAGDHLQLPPTVKSDEAAKKG 395
Query: 714 LSQSLFERLVVL-GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQ-NGVCADERKLSKIDF 771
L+ SL E+L+ L GI L +QYRM+ ++ +FPS +FY+ L+ +G D
Sbjct: 396 LAISLLEKLMPLPGISEM-LAIQYRMNEKIMQFPSQWFYDNKLEAHGSVKDH-------- 446
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVIT 828
D + F T G +EE+ G+ N+ EA V I K IG+I+
Sbjct: 447 --AFDDDVIQFIDTAGTGYEEELVGAPFGIRNKQEADLVLAILNNVAELN-KQASIGIIS 503
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY+ Q +Q+++ Q + I+V +VD FQG+EKD+II+S VRSN Q IGFL
Sbjct: 504 PYKLQ----IQYIREQLIEQKITSKNIQVQTVDGFQGQEKDIIIISLVRSNGKQEIGFLK 559
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
D RR+NVA+TRA+ +IVIG+ LS +
Sbjct: 560 DLRRMNVAITRARKKLIVIGDSSTLSSSKFY 590
>gi|319903097|ref|YP_004162825.1| helicase [Bacteroides helcogenes P 36-108]
gi|319418128|gb|ADV45239.1| putative helicase [Bacteroides helcogenes P 36-108]
Length = 651
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 281/565 (49%), Gaps = 60/565 (10%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRM 457
R S D T+ + D G V + + A +A V + TS+ M
Sbjct: 91 FRQSADGKITYMNFTATVSYADE-GRMVVVMPGTGAVMEVQAADNLGVQLYFDETSYRTM 149
Query: 458 QLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
AL + A + LL + + FR P F P LN +Q AV +
Sbjct: 150 FEALEDTLRAKGNRLAELRDTLL--DTSKAKFRELYPVRF-----PWLNATQESAVNKVL 202
Query: 518 -QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV 576
R ++++ GPPGTGKT T +Y+ + + V+VCA SN AVD ++EK+ G+ V+
Sbjct: 203 CTRDVAIVHGPPGTGKTTTLVEAIYETLHRE-PQVMVCAQSNTAVDWISEKLVDRGVNVL 261
Query: 577 RVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL------SSADEK--- 627
R+ +R D +SF R E +S +L +++E +L S DE+
Sbjct: 262 RIGNPTR-VNDKMLSF----TYERRFESHSLYTELWSIRQELRQLQGKTRRGSYDEREGV 316
Query: 628 RYRM-----------LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
R R+ L+ NAE L D+A VI T VG+ L +F ++ IDE+ QA
Sbjct: 317 RSRISRLRDRATALELQINAE--LFDSAHVIASTLVGSNHRLLSGHRFGTLFIDEAAQAL 374
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR---LE 733
E C + I A ++IL GDHCQL P V C +AAR GL ++L E V +P L+
Sbjct: 375 EAACWI-AIRKADRVILAGDHCQLPPTVKCPEAARGGLERTLME--TVAAAKPTAVSLLK 431
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
+QYRMH ++ +F S +FY G L+ R + D P D + + +EE G
Sbjct: 432 MQYRMHEDIMRFSSEWFYNGELKAAPEVRHRGILDWDTPICWIDTSEMNF----KEEFVG 487
Query: 794 SGTSYVNRTEASNV-EKITTRFIRCGMK---PEQI--GVITPYEGQRAFLVQHMQYQGSL 847
+N+ EA+ + +++ +R G K EQI G+I+PY+ Q VQH++ +
Sbjct: 488 ETFGRINKEEANLLLQELEAYILRIGGKRILEEQIDFGLISPYKAQ----VQHLRNKIKT 543
Query: 848 PAKI--YQEI-EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
A + Y+ + V +VD FQG+E+D+I +S VR+N+ IGFL+D RR+NVA+TRA+ +
Sbjct: 544 SAALRPYRSLLTVNTVDGFQGQERDVIFISLVRANEDGQIGFLHDLRRMNVAITRARMKL 603
Query: 905 IVIGNPKVLSKQPLWNNLLNFYKEQ 929
+++G L++ + L+ + KEQ
Sbjct: 604 VILGEADTLNRHAFYKKLMEYIKEQ 628
>gi|406696583|gb|EKC99865.1| hypothetical protein A1Q2_05830 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1018
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 237/454 (52%), Gaps = 44/454 (9%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK--QTGSPVLVCAPS 557
P +P LN SQ A+ + LSL+QGPPGTGKT + L + Q PVLVCA +
Sbjct: 530 PRVP-LNPSQTRAIAMMLSERLSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCAHT 588
Query: 558 NIAVDQLTEKIHRTGLKVVR----------VCAKSREA-IDSPVSFLALHNQIRNME--M 604
N+AVD L E + G+ VR V A + EA I+ ++ L N+ RN + +
Sbjct: 589 NVAVDNLVEGLKTQGVNAVRFGSPDRVSPRVEAHTLEARIEQHPAYPVL-NRARNSKESL 647
Query: 605 NSELKKLL---QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
+EL + L Q + + E+ + + Y +LK+ + +L ADV+C TC+ A L
Sbjct: 648 QAELSENLAGPQREAKQKEIGKLNGRIY-LLKRRLQAEVLHEADVVCTTCLSATSRVLEV 706
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
I F + +DE+ ATEP +VP+ G+ Q+ ++GDH QL PV++ + A + GL SLFER
Sbjct: 707 IDFPFVFLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSLFER 766
Query: 722 LVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP---WPVPD 777
L+ P L+ QYRMHP ++ F S FY G L++G D + + P + +PD
Sbjct: 767 LIHEQAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLKDGTVVDGQVDPVLHPPTTAFLLPD 826
Query: 778 ----KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQIGVITPYE 831
K + F E + S N EA V I + +K IGVI PY
Sbjct: 827 GDSSKSLTFLNHDFPE--SPQNRSIANHHEAGRVCDIVADLLASNPDLKGADIGVIAPYS 884
Query: 832 GQRAFLVQHM-----------QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND 880
Q + + + Q+ G A+ ++IE+ +VD F+GREK +II S VRSN
Sbjct: 885 AQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVRSNT 944
Query: 881 HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
+GFL D RRLNV LTRAK +I++G+ + LS
Sbjct: 945 GGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTLS 978
>gi|50546118|ref|XP_500586.1| YALI0B06897p [Yarrowia lipolytica]
gi|49646452|emb|CAG82817.1| YALI0B06897p [Yarrowia lipolytica CLIB122]
Length = 649
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/461 (35%), Positives = 256/461 (55%), Gaps = 50/461 (10%)
Query: 493 LPKHFSAPNL----PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
+ H PNL LN SQV AV+H++ ++++ GPPGTGKT T I+ QLV++
Sbjct: 170 ISDHKDDPNLQLYNTALNPSQVEAVQHSVGSAQVTVVHGPPGTGKTHTLVEIIRQLVQKK 229
Query: 548 GSPVLVCAPSNIAVDQLTEKIHR--TGLKVVRVCAKSR-------EAIDSPVSFLALHNQ 598
G VLVC PSNI+VD L E++H G +++R+ +R ++D
Sbjct: 230 GQRVLVCGPSNISVDTLLERLHPHFNGNQLLRIGHPARLLEANLQHSLDIVSKTCDSGQI 289
Query: 599 IRNMEMN--SELKKLLQLKEETGELSSADEKRYRMLKKNAEK-------SLLDNADVICC 649
++++++N +L+K+ + K +G A K ML+K ++ LL A V+C
Sbjct: 290 VKDVQVNIDQQLRKISKTK--SGREKYAMYKEIGMLRKEFKERQKKVVADLLLQAKVVCA 347
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL--GAKQLILVGDHCQLGPVVMCK 707
T G GD L ++F +I+IDE Q+ EP+C +P+ A++LI+ GD+ QL P V C+
Sbjct: 348 TLHGTGDSCLKDVQFDTIIIDEISQSLEPQCWIPISRYPSAQKLIIAGDNQQLPPTVKCE 407
Query: 708 KAA-RAGLSQSLFERLV--VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
++ + L +LF+ LV IR L+VQYRMH + +FPS Y G L
Sbjct: 408 QSKIKKQLELTLFDHLVGNYDNIRRL-LKVQYRMHDAIMQFPSQELYGGQLVAHSSVARH 466
Query: 765 KLSKIDFPWPVPD----KPMLFYVTQG-----QEEIAGS-GTSYVNRTEASNVEKITTRF 814
L+ D P D P+++ TQG QE+ +G S +N +EA V + +
Sbjct: 467 TLA--DLPHVTEDYETTTPVVWIDTQGDDFYEQEDESGKLNPSRLNDSEAYLVRRHVGKL 524
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
+ G+ +IGVITPY Q A L++ + + + PA +EVA+VD+FQGREK+ +I+S
Sbjct: 525 LDLGVLESEIGVITPYSAQ-ASLIRSLIHPTN-PA-----VEVATVDSFQGREKEAVILS 577
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
VRSN++ IGFL + RRLNVA+TR + + V+GN + L++
Sbjct: 578 LVRSNENHEIGFLGEYRRLNVAMTRPRRHLCVVGNMETLAR 618
>gi|270295956|ref|ZP_06202156.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273360|gb|EFA19222.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 637
Score = 226 bits (575), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 181/559 (32%), Positives = 271/559 (48%), Gaps = 56/559 (10%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGL-ELKSSAGAPTEA--TTGFSVDFIWKSTSF 454
R S D T+ + ++ DE + + AGA E T V + TS+
Sbjct: 97 FRQSADGKITYMNFTATV----SYADETRMVAIMPGAGAVMEVQETDNLGVQLYFDETSY 152
Query: 455 DRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK 514
M AL + A + LLG + FR P F P LN +Q AV
Sbjct: 153 RTMFEALEDTLRSKGNRLAELRDILLG--TSKAGFRELYPVRF-----PWLNSTQETAVN 205
Query: 515 HAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
+ R ++++ GPPGTGKT T +Y+ + + VLVCA SN AVD ++EK+ G+
Sbjct: 206 KVLCARDVAIVHGPPGTGKTTTLVEAIYETLHRE-PQVLVCAQSNTAVDWISEKLVDRGV 264
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS---SADEK--- 627
V+R+ +R D +SF + N + EL + + E G + S DE+
Sbjct: 265 NVLRIGNPTR-VNDKMLSF-TYERRFENHPLYPELWSIRKNLRELGSRARRGSYDEREGV 322
Query: 628 RYRM---------LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
R RM L+ L D A VI T V + L +F ++ IDE+ QA E
Sbjct: 323 RSRMSRLRDRATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQALEA 382
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-----VLGIRPFRLE 733
C + I A +++L GDHCQL P + C +AAR GL ++L E++V V+ + L+
Sbjct: 383 ACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVSNKPAVVSL----LK 437
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
VQYRMH E+ KFPS +FY G L+ R + D P D + + +EE G
Sbjct: 438 VQYRMHEEIMKFPSQWFYNGELEAAPEVRYRGILDWDTPIHWIDTSEMDF----KEEFVG 493
Query: 794 SGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQHMQYQGSL 847
+N+ EA S ++ R + E+I G+I+PY+ Q +L ++ SL
Sbjct: 494 ETFGRINKAEADLLLSELKIYINRISGNRILEEKIDFGIISPYKAQVQYLRNKIKADASL 553
Query: 848 PAKIYQEI-EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
K Y+ + V +VD FQG+E+D+I +S VR+N+ IGFLND RR+NVA+TRA+ +++
Sbjct: 554 --KPYRSLFTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVI 611
Query: 907 IGNPKVLSKQPLWNNLLNF 925
+G L + LL F
Sbjct: 612 MGEADTLKHHGFYRKLLEF 630
>gi|284038257|ref|YP_003388187.1| ATPase AAA [Spirosoma linguale DSM 74]
gi|283817550|gb|ADB39388.1| AAA ATPase [Spirosoma linguale DSM 74]
Length = 632
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 273/526 (51%), Gaps = 65/526 (12%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPK-HFSAP- 500
V+ ++ S+D M+ AL K A S++ +RL+ VL P H P
Sbjct: 122 LGVEVLFDDNSYDEMEAAL-KLA---NSLAEKSDNRLIN-----VLTGSTSPTFHPDTPP 172
Query: 501 -NLPDLNRSQVYAV-KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
+LP LN SQV AV K L+++ GPPGTGKT T + L KQ +LV APSN
Sbjct: 173 LSLPRLNPSQVAAVGKILTANELAIVHGPPGTGKTTTLVQAIKALHKQDNKKLLVVAPSN 232
Query: 559 IAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
AVD L+EK+H GL V+RV +R + + L L +++ + E +KL + E
Sbjct: 233 TAVDLLSEKLHDEGLSVLRVGNPAR--VSERLMALTLDHKVADHPAMKEARKLKKQANEF 290
Query: 619 GELSSA----------DEKR------YRMLKK--NAEKSLLDN----ADVICCTCVGAGD 656
++ D+++ +R++K+ N E+ ++D+ A VI T VGA
Sbjct: 291 KNMAHKYKRNFGKAERDQRKALFDEAHRIMKEVGNTEQYVIDDLVGKAQVITATLVGANH 350
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
+ + +H+++IDE+ QA EP C +P IL A++++L GDHCQL P + +AAR GLS
Sbjct: 351 YTVRNLTYHTVVIDEAGQALEPACWIP-ILKAQKVVLAGDHCQLSPTIKSAEAARKGLSH 409
Query: 717 SLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQ-NGVCADERKLSKIDFPWP 774
+L E+ + L L + QYRMH + + S FY+ L+ +G A + S D
Sbjct: 410 TLLEKCIKLHPEAVSLLDEQYRMHEHIMGYSSQVFYKNKLKAHGSVA---RHSLFD---- 462
Query: 775 VPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEK--------ITTRFIRCGMKPEQ 823
D ++F T G E++ GTS N EA+ + K ++TR+ +
Sbjct: 463 -SDTALVFVDTAGCGFDEKL--DGTSSTNPEEAALLMKHLTQLVTDLSTRYTKENFP--T 517
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
I +I+PY+ Q L + + L I V ++D+FQG+E+D++ +S RSN
Sbjct: 518 IAIISPYKQQINVLKDQLLHTPEL-QPYSDRISVNTIDSFQGQERDIVYISMTRSNAEGE 576
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
IGFL+D RR+NVA+TRA+ ++++G+ L+ P + + + Y EQ
Sbjct: 577 IGFLSDIRRMNVAMTRARKKLVIVGDSATLAGLPFYADFIA-YAEQ 621
>gi|423303764|ref|ZP_17281763.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|423307517|ref|ZP_17285507.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
gi|392687095|gb|EIY80392.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|392690126|gb|EIY83397.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
Length = 610
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 275/561 (49%), Gaps = 60/561 (10%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGL-ELKSSAGAPTEA--TTGFSVDFIWKSTSF 454
R S D T+ + ++ DE + + AGA E T V + TS+
Sbjct: 70 FRQSADGKITYMNFTATV----SYADETRMVAIMPGAGAVMEVQETDNLGVQLYFDETSY 125
Query: 455 DRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK 514
M AL + A + LLG + FR P F P LN +Q AV
Sbjct: 126 RTMFEALEDTLRSKGNRLAELRDILLG--TSKAGFRELYPVRF-----PWLNSTQETAVN 178
Query: 515 HAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
+ R ++++ GPPGTGKT T +Y+ + + VLVCA SN AVD ++EK+ G+
Sbjct: 179 KVLCARDVAIVHGPPGTGKTTTLVEAIYETLHRE-PQVLVCAQSNTAVDWISEKLVDRGV 237
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS---SADEK--- 627
V+R+ +R D +SF + N + EL + + E G + S DE+
Sbjct: 238 NVLRIGNPTR-VNDKMLSF-TYERRFENHPLYPELWSIRKNLRELGSRARRGSYDEREGV 295
Query: 628 RYRM-----------LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
R RM ++ NAE L D A VI T V + L +F ++ IDE+ QA
Sbjct: 296 RSRMSRLRDRATALEIQINAE--LFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQAL 353
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-----VLGIRPFR 731
E C + I A +++L GDHCQL P + C +AAR GL ++L E++V V+ +
Sbjct: 354 EAACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVSNKPAVVSL---- 408
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEI 791
L+VQYRMH E+ KFPS +FY G L+ R + D P D + + +EE
Sbjct: 409 LKVQYRMHEEIMKFPSQWFYNGELEAAPEVRYRGILDWDTPIHWIDTSEMDF----KEEF 464
Query: 792 AGSGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQHMQYQG 845
G +N+ EA S ++ R + E+I G+I+PY+ Q +L ++
Sbjct: 465 VGETFGRINKAEADLLLSELKIYINRIGGNRILEEKIDIGIISPYKAQVQYLRSKIKADA 524
Query: 846 SLPAKIYQEI-EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
SL K Y+ + V +VD FQG+E+D+I +S VR+N+ IGFLND RR+NVA+TRA+ +
Sbjct: 525 SL--KPYRSLFTVNTVDGFQGQERDVIFISLVRANEEGQIGFLNDLRRMNVAITRARMKL 582
Query: 905 IVIGNPKVLSKQPLWNNLLNF 925
+++G + L + LL F
Sbjct: 583 VILGEAETLKHHGFYRKLLEF 603
>gi|325104103|ref|YP_004273757.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324972951|gb|ADY51935.1| AAA ATPase [Pedobacter saltans DSM 12145]
Length = 629
Score = 225 bits (574), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 261/508 (51%), Gaps = 44/508 (8%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
V ++ + S+D M+ AL+K + +++ + ++L V++ F+ + S+
Sbjct: 123 VQLLFDNNSYDEMKRALKKAEIIERNDTENRLIKVLT-GVEKPFFKKEASGYISSR---- 177
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV + + L+++ GPPGTGKT T + L Q+G +LV APSN AVD
Sbjct: 178 LNDSQNQAVNSILAAQELAILHGPPGTGKTTTLVEAISALYMQSGKQILVTAPSNTAVDL 237
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
LT K+ G+ V+R+ R + + L L +I + N E+K+L + E ++
Sbjct: 238 LTLKLAEKGVNVIRIGNPIR--VSQKLEELTLDYKINQHQYNKEIKQLKKQAAEYRNMAH 295
Query: 624 ADEKRYRMLKKNAEKSLLD----------------------NADVICCTCVGAGDPRLLK 661
++ + L++ K+L D A VI T VG + +
Sbjct: 296 KYKRSFGKLEREQRKALFDEAHKLLKQVEQTESFISEDLLNKAQVITATLVGVNNYAIKD 355
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
+ ++IDE+ QA EP C +PV L ++++I GDH QL P V K+A + GLS +L E+
Sbjct: 356 RDYDIVVIDEAAQALEPACWIPV-LRSRKVIFAGDHLQLPPTVKSKEAEKLGLSSTLLEK 414
Query: 722 LVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
+G P L QYRM+ E++ +PS YE L RKL + D P D
Sbjct: 415 --NMGFHPEAVSLLTTQYRMNKEINDYPSIELYESKLHADRSVATRKLDQKDIPVEFVDT 472
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-QIGVITPYEGQRAFL 837
+ E+I +GTS N EA+ K T ++ K + + VI+PY+ Q L
Sbjct: 473 AGCSF----DEKI--NGTSVYNPEEANFTLKHLTGLLQNHNKAKYSVAVISPYKQQVELL 526
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
+ ++ L + Q I++ ++D+FQG+E+D++ +S RSN IGFL+D RR+NVA+
Sbjct: 527 KELIEDWEDLKPFLAQ-IDINTIDSFQGQERDIVYISLTRSNSENAIGFLSDIRRMNVAI 585
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
TRA+ ++VIG+ LSK +++ +++
Sbjct: 586 TRARMKLVVIGDSGTLSKNAFYSDFISY 613
>gi|367012806|ref|XP_003680903.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
gi|359748563|emb|CCE91692.1| hypothetical protein TDEL_0D01080 [Torulaspora delbrueckii]
Length = 2068
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 171/519 (32%), Positives = 257/519 (49%), Gaps = 109/519 (21%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ + + + SLIQGPPGTGKT T ++ Y L + P
Sbjct: 1295 LNSSQAKAIVNTVSKEGFSLIQGPPGTGKTKTILGVIGYFLSTRNTLPSNVIQAPKGSVS 1354
Query: 551 -----------VLVCAPSNIAVDQLTEKI-----HRTGLK----VVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ +R G K +VRV +A+++ +
Sbjct: 1355 LSTEQLLKKQKILICAPSNAAVDEIVLRLKDGITNRQGGKFQPSIVRV--GRSDAVNAAI 1412
Query: 591 SFLALHNQI------RNMEM--NSELKKLL------------QLKEETGELSSA------ 624
L L Q+ +N E N +L+K +L E G SS+
Sbjct: 1413 RDLTLEEQVDKQVSQKNYEFSNNPDLEKKFSSTVAQRRELRAKLDAENGSASSSLSTEDI 1472
Query: 625 ---------------------DEKR------YR---MLKKNAEKSLLDNADVICCTCVGA 654
DE R YR + ++NA+ +L +++VIC T GA
Sbjct: 1473 AKLQIKIRELSKELNELGRQRDEIREKNSVNYRNRDLDRRNAQARILASSNVICSTLSGA 1532
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L L +KF ++++DE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1533 AHDVLASLGVKFDTVIVDEACQCTELSAIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1592
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
G +QSLF R+ P+ L+VQYRMHP +SKFPS FY G L++G + + P
Sbjct: 1593 GYNQSLFVRMEK-NSSPYLLDVQYRMHPAISKFPSAEFYNGRLKDGPDVEILNIR----P 1647
Query: 773 W--PVPDKPMLFY-VTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIG 825
W P P F+ + G+E SYVN R VE + ++ R +IG
Sbjct: 1648 WHKNAPLTPYRFFDIVTGKESQNAKSMSYVNTEEIRVAIELVENLVNKYERELDFSGKIG 1707
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GI 884
VI+PY+ Q + Q++ A I Q ++ ++D FQG+EK++II+SCVR++D + +
Sbjct: 1708 VISPYKEQA--MTMRRQFRSHFGASIAQYVDFNTIDGFQGQEKEIIIISCVRADDSKTSV 1765
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
GFL D RR+NVALTRAK + ++G+ K L K LW NL+
Sbjct: 1766 GFLRDFRRMNVALTRAKTSMWILGHQKSLVKNKLWRNLI 1804
>gi|19075869|ref|NP_588369.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676175|sp|O94247.1|HCS1_SCHPO RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|4239673|emb|CAA20863.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe]
Length = 660
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 289/578 (50%), Gaps = 56/578 (9%)
Query: 393 GDELKLRYSYDASKT-------WSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSV 445
GD + +R + +SK S G V ++ + + + LKS P+ + T SV
Sbjct: 96 GDVVSIRQDFQSSKKKRPNETDISVEGVVTRVHER---HISVALKSEEDIPS-SVTRLSV 151
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 505
+ +++RM+ + +F +++ L+G +V L N +L
Sbjct: 152 VKLVNRVTYERMRHTMLEFKRSIPEYRNSLFYTLIGRKKADVSIDQKLIGDIKYFN-KEL 210
Query: 506 NRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
N SQ AVK +I + LSLI GPPGTGKT T I+ QLV + +LVC SN+AVD +
Sbjct: 211 NASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLVLRNKR-ILVCGASNLAVDNI 269
Query: 565 TEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEE 617
+++ +G+ +VR+ +R +D + L+ IR + + ++ K +
Sbjct: 270 VDRLSSSGIPMVRLGHPARLLPSILDHSLDVLSRTGDNGDVIRGISEDIDVCLSKITKTK 329
Query: 618 TGELSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
G K R L+K+ K +++ + V+ CT GAG +L +F +++ID
Sbjct: 330 NGRERREIYKNIRELRKDYRKYEAKTVANIVSASKVVFCTLHGAGSRQLKGQRFDAVIID 389
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG---I 727
E+ QA EP+C +P +LG ++IL GDH QL P V K+ S+FERLV +
Sbjct: 390 EASQALEPQCWIP-LLGMNKVILAGDHMQLSPNVQSKRPY-----ISMFERLVKSQGDLV 443
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF--PWPVPDKPMLFYVT 785
+ F L +QYRMH +SKFPS+ FY+ L +R L ++ + D P+ FY T
Sbjct: 444 KCF-LNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFYDT 502
Query: 786 QG--QEEIAGSGT------SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
G QE+ S N EA V + + G++ + I V+TPY Q A +
Sbjct: 503 LGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKDIAVVTPYNAQVALI 562
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
Q ++ +G E+E+ SVD QGREK+ II S VRSND + +GFL + RRLNVA+
Sbjct: 563 RQLLKEKGI-------EVEMGSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRRLNVAI 615
Query: 898 TRAKYGIIVIGNPKVLS-KQPLWNNLLNFYKEQKVLVE 934
TR K + VIG+ + ++ ++F +E ++++
Sbjct: 616 TRPKRHLCVIGDSNTVKWASEFFHQWVDFLEENAIVMD 653
>gi|401881567|gb|EJT45865.1| hypothetical protein A1Q1_05671 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1018
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 237/454 (52%), Gaps = 44/454 (9%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK--QTGSPVLVCAPS 557
P +P LN SQ A+ + LSL+QGPPGTGKT + L + Q PVLVCA +
Sbjct: 530 PRVP-LNPSQTRAIAMMLSERLSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCAHT 588
Query: 558 NIAVDQLTEKIHRTGLKVVR----------VCAKSREA-IDSPVSFLALHNQIRNME--M 604
N+AVD L E + G+ VR V A + EA I+ ++ L N+ RN + +
Sbjct: 589 NVAVDNLVEGLKTQGVNAVRFGSPDRVSPRVEAHTLEARIEQHPAYPVL-NRARNSKESL 647
Query: 605 NSELKKLL---QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
+EL + L Q + + E+ + + Y +LK+ + +L ADV+C TC+ A L
Sbjct: 648 QAELSENLAGPQREAKQKEIGKLNGRIY-LLKRLLQAEVLHEADVVCTTCLSATSRVLEV 706
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
I F + +DE+ ATEP +VP+ G+ Q+ ++GDH QL PV++ + A + GL SLFER
Sbjct: 707 IDFPFVFLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSLFER 766
Query: 722 LVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP---WPVPD 777
L+ P L+ QYRMHP ++ F S FY G L++G D + + P + +PD
Sbjct: 767 LIHEQAVPSIMLDTQYRMHPSIAAFSSEAFYNGQLRDGTVVDGQVDPVLHPPTTAFLLPD 826
Query: 778 ----KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQIGVITPYE 831
K + F E + S N EA V I + +K IGVI PY
Sbjct: 827 GDSSKSLTFLNHDFPE--SPQNRSIANHHEAGRVCDIVADLLASNPDLKGADIGVIAPYS 884
Query: 832 GQRAFLVQHM-----------QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND 880
Q + + + Q+ G A+ ++IE+ +VD F+GREK +II S VRSN
Sbjct: 885 AQIRLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVRSNT 944
Query: 881 HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
+GFL D RRLNV LTRAK +I++G+ + LS
Sbjct: 945 GGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTLS 978
>gi|255036839|ref|YP_003087460.1| type III restriction protein res subunit [Dyadobacter fermentans
DSM 18053]
gi|254949595|gb|ACT94295.1| type III restriction protein res subunit [Dyadobacter fermentans
DSM 18053]
Length = 636
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 262/519 (50%), Gaps = 56/519 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKF-AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
+D ++ S+D MQ AL+ ++ ++ L G K
Sbjct: 122 LGIDLLFDDNSYDEMQSALKTADSLGSSDKEGHLIKVLTGEKAPS------FDKDIYPIT 175
Query: 502 LPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP LN SQ AV++ + + L+++ GPPGTGKT T + LVK+ P+LV APSN A
Sbjct: 176 LPKLNPSQQRAVQNILSAQELAIVHGPPGTGKTTTLVQAIKALVKKDNRPILVVAPSNTA 235
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VD L+EK+ GL V+RV R + ++ L L +++ + ++K L + E
Sbjct: 236 VDLLSEKLSEEGLNVLRVGNPVR--VSERLTALTLDSKMSSHASVKDIKTLKKQANEYKN 293
Query: 621 LSSADEKRYRMLKKNAEKSLLDNA----------------------DVICCTCVGAGDPR 658
++ ++ + +++ K+L D A V+ T VG+
Sbjct: 294 MAHKYKRHFGKAERDQRKALFDEAHRIMKDVANMEQYIIDDLLTKTQVVTATLVGSNHFT 353
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
+ +K+ +++IDE+ QA EP C +P IL A++++ GDH QL P + ++AA+ GLS +L
Sbjct: 354 VRNMKYRTVVIDEAGQALEPACWIP-ILKAEKVVFAGDHLQLPPTIKSEEAAKGGLSTTL 412
Query: 719 FERLVVLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
E+ V L LE QYRM+ + + S FY L+ A E ++ FP +
Sbjct: 413 LEKCVALHPESVVLLEEQYRMNEAIMGYSSKVFYHDKLK----AHESVAGRVLFPG---E 465
Query: 778 KPMLFYVTQG---QEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPEQ---IGVI 827
P+ F T G +++ GTS N EA+ ++ ++ F + KPE I +I
Sbjct: 466 APLAFVDTAGCGFDDKL--EGTSSTNPEEAAFLFKHLTQLAAEFAKVNPKPESFPSIAII 523
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIY-QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+PY+ Q L + + L ++Y +I V ++D+FQG+E+D++ +S R+N IGF
Sbjct: 524 SPYKEQINILKNLLAHAPHL--QLYLDKIAVNTIDSFQGQERDVVYISMTRNNIEGQIGF 581
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
L D RR+NVA+TRA+ ++VIG+ LS P + N + +
Sbjct: 582 LADIRRMNVAMTRARKKLVVIGDSATLSVLPFYENFIAY 620
>gi|124009432|ref|ZP_01694109.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
gi|123984980|gb|EAY24938.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
Length = 649
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 268/523 (51%), Gaps = 52/523 (9%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+D ++ + ++ M A+RK + + L+G L + LP ++ L
Sbjct: 124 LGIDLLFDAVTYKEMDAAVRKVVSSEDPRVIELRDVLIGKKKARFLDKSELPDYYEVATL 183
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
N SQ AV++ ++ + +++I GPPGTGKT T V +L Q VLV APSN AV
Sbjct: 184 ---NESQNEAVQNILRAQDVAIIHGPPGTGKTTTMVAAV-KLTLQQEKQVLVTAPSNTAV 239
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
D LT+++ G+ V+RV +R ++ + +L +QI LKK+ + +E ++
Sbjct: 240 DLLTKRLLAKGVSVIRVGNPAR--VNEDLIPFSLESQIAQHPDYKLLKKIRRDADEYKKM 297
Query: 622 SSA---------DEKRYRM-------------LKKNAEKSLLDNADVICCTCVGAGDPRL 659
++ E+R M L+K SLL+N V+ T VG+ + +
Sbjct: 298 AAKYKRNFGKEEREQRKLMFAEASKLKHEAYALEKYIVDSLLNNTQVVTATLVGSVNKFI 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+F ++ IDE+ QA EP C +P +L +++++ GDHCQL P + AA+ GL+++LF
Sbjct: 358 RYRRFSTVFIDEAGQALEPACWIP-LLKSERVVFAGDHCQLPPTIKSFDAAKGGLTETLF 416
Query: 720 ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG-VCADERKLSKIDFPWPVPDK 778
E+++ L+ QYRMH + +F + FY+G L + R + D + ++
Sbjct: 417 EQVIKKQAVDVMLKTQYRMHEHIMQFSNKEFYQGELLAADTVVNHRLFAHADLQGEMINQ 476
Query: 779 PMLFYVTQG----QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-----PEQI----- 824
P+ F T G ++ +A +G+ Y N EA + K +I+ + P+ +
Sbjct: 477 PVEFIDTAGCGFEEKTMAETGSKY-NPDEAGILLK---HWIQLATQLQLAEPDMLKEGWF 532
Query: 825 --GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
G+I+PY+ Q L + L ++ ++ S+D FQG+E+D++ +S VRSND
Sbjct: 533 SAGIISPYQAQVKHLKELFAEHPDL-TEVAPWTDINSIDGFQGQERDVVYISMVRSNDKG 591
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
IGFL D RR+NVALTRA+ ++VIG+ L + + + L++
Sbjct: 592 KIGFLEDTRRMNVALTRARKKLVVIGDSGTLGQNAFYQHFLDY 634
>gi|395218587|ref|ZP_10402229.1| ATPase AAA [Pontibacter sp. BAB1700]
gi|394454278|gb|EJF08968.1| ATPase AAA [Pontibacter sp. BAB1700]
Length = 645
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 257/524 (49%), Gaps = 54/524 (10%)
Query: 439 ATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFS 498
T ++ + S+ M++AL+K + + A + +LG P F+
Sbjct: 121 GTGRMGIELTFDEISYREMEIALKKVQEANGTRLAELRDIMLGVK----------PATFT 170
Query: 499 APNLPD---LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC 554
L + LN SQ AV+ Q R +++I GPPGTGKT T + +K + +LV
Sbjct: 171 DEKLEEIQVLNESQNEAVQKIAQARDVAIIHGPPGTGKTTTLVQAILHTLK-SQKRLLVT 229
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNMEMNSE 607
APSN AVD LTEK+ G+ V+R+ SR +D+ V + ++N+ +E
Sbjct: 230 APSNTAVDLLTEKLANEGVNVIRIGNPSRVSDVLLEHTLDAQVMAHRAYKDLKNLRKTAE 289
Query: 608 LKKLL--QLKEETGELSSADEKRY-----RMLKK--NAEK----SLLDNADVICCTCVGA 654
K + Q K + G A + Y R+L + N E LLDN VI CT VGA
Sbjct: 290 EYKRMAYQFKRKFGHQERAQRQLYKSESHRLLDEADNVEHYITDDLLDNVQVITCTLVGA 349
Query: 655 GDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
+ + + + ++ IDE+ QA EP C +P I +++L GDHCQL P + A + GL
Sbjct: 350 ANKAIRHLTYDTVFIDEAAQALEPACWIP-ISRTNRVVLAGDHCQLPPTIKSLVADKGGL 408
Query: 715 SQSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
S +LFE+ + +P L+ QYRMH + +F + FY G L +L
Sbjct: 409 SVTLFEKCI--NRQPEVSVMLKTQYRMHHHIMQFSNQQFYGGELVAHESVHSAELHGYST 466
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI 824
+ PD + F T G E S N E +++ + + + P +I
Sbjct: 467 IF-APDMAVEFIDTAGCGYNEAEMPETQSSANPEEGDLLINHLSNLLKDYDEEEVAPLKI 525
Query: 825 GVITPYEGQRAFL---VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
GVI PY Q +L V+H L K +++ + +VD+FQG+E+D+I MS VRSN+
Sbjct: 526 GVIAPYRAQINYLQDKVEHTPRLHELHQK--RQLSIGTVDSFQGQERDIICMSLVRSNER 583
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
IGFL D RR+NVA+TRA+ +I++G+ LS P + L+ +
Sbjct: 584 GEIGFLADERRMNVAMTRARRKLIIVGDSSTLSTNPFFAELIAY 627
>gi|124511670|ref|XP_001348968.1| erythrocyte membrane-associated antigen [Plasmodium falciparum 3D7]
gi|23498736|emb|CAD50806.1| erythrocyte membrane-associated antigen [Plasmodium falciparum 3D7]
Length = 2283
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 217/424 (51%), Gaps = 27/424 (6%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ-TGSPVLVCAPSNI 559
NLP LN SQ A A+ R L+L+QGPPGTGKT + I+ KQ + +L A SN+
Sbjct: 1774 NLP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVADSNV 1832
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
A + L E + + ++ VRV A S DS A+ ME + K LL+L++
Sbjct: 1833 AANNLVEGLKKRNIQAVRVGAGS----DSDFHEEAI------MEFH-RYKDLLKLRKNNM 1881
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
+ K +++K + +V+ TCVG+G KF ++IDE Q+ EP
Sbjct: 1882 Q------KEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPS 1935
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRM 738
++P+ L+L+GDH QL P ++ A + GL +SL ER V+ I P L Q RM
Sbjct: 1936 NLIPLGHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPVHLLNTQRRM 1995
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ----GQEEIAGS 794
H + FP+ FY+ L+ +E + F WP P + F G +
Sbjct: 1996 HLSICVFPNFHFYDNKLKTANVTEENRPIIKGFLWPNPKCRLAFIDVSIGKPGSKFENAY 2055
Query: 795 GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
GTS N E + + I G + ++IG++T Y+ Q+ L + +Q S A
Sbjct: 2056 GTSKFNLYEIEPLITVLKSIINEGCVSVDEIGILTAYDAQKMKLKKAVQDAFSYEAS--H 2113
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
IE+ S+D FQG+EKDLI+ S VRSN + +GFL D RRLNV LTRAK G+I+ G+ L
Sbjct: 2114 RIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKRGVILFGDQFTL 2173
Query: 914 SKQP 917
+ P
Sbjct: 2174 ANDP 2177
>gi|108758058|ref|YP_634107.1| DNA helicase [Myxococcus xanthus DK 1622]
gi|108461938|gb|ABF87123.1| putative DNA helicase [Myxococcus xanthus DK 1622]
Length = 639
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 244/514 (47%), Gaps = 53/514 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+D + ++DR++ L++ D+ + +LG+ R P+ F P
Sbjct: 125 LRLDVVPNDVTYDRLRAGLQRIKALDKGAERHKREVVLGNEPP----RFDKPREFE-PTR 179
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN Q A A+ L+ GPPGTGK+ A + Q V G +L A SN AV
Sbjct: 180 P-LNPEQQDATARALAAEDFFLVHGPPGTGKSTVLAEVAAQAVAD-GKRLLCTAASNAAV 237
Query: 562 DQLTEKIHRTGLKVVRVC------------------------AKSREAIDSPVSFLALHN 597
D L + GL+ +RV A SR+ D S L
Sbjct: 238 DHLLDLCLDKGLRAIRVGHPARVAARLQEHTLDIVVESHPDRAVSRDLFDEAFSLLGYAR 297
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSA-DEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
+ RN + E + + T E DE R L++ A KS+L NADVIC T
Sbjct: 298 RQRNQGRSRE--RFANARASTTEAKGMLDEAR--ALERKAVKSVLANADVICVTLSSLDS 353
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
L +F L+DE+ QATEP ++ L A ++IL GD QL P V+ ++AA+AGL
Sbjct: 354 GVLSGQQFDLALLDEATQATEPLALLG-FLRAPRVILAGDPQQLPPTVLSQEAAKAGLGV 412
Query: 717 SLFERLVV---LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
SLFERL+ G++ L QYRM+ + FPS Y G L+ +R L + P
Sbjct: 413 SLFERLLKDHGEGVKRM-LREQYRMNARIMDFPSREMYGGELRAHPSIADRTLDAVLTPG 471
Query: 774 PVPDKPMLFYV-TQGQ---EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
D P + Y+ T G+ EE+ + S N EA VE + G+ P ++ VITP
Sbjct: 472 ADVDAPPVLYLDTAGKGFDEEVEPTTRSLFNPGEAGLVEARVRALLAAGLAPRELAVITP 531
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q L + ++ + E+EV +VDAFQGREKD II+S RSN +GFL D
Sbjct: 532 YSAQAHQLRERIE-------ALSPEVEVDTVDAFQGREKDAIIVSLTRSNSEGQLGFLTD 584
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
RR+NVALTRA+ + V+G+ LS P + +
Sbjct: 585 LRRMNVALTRARRHLFVVGDSATLSGHPFYARFV 618
>gi|403341854|gb|EJY70244.1| DNA-binding protein SMUBP-2 [Oxytricha trifallax]
Length = 1044
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 252/502 (50%), Gaps = 62/502 (12%)
Query: 486 EVLFRCHLPK-HFSAPNLPD-------LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTS 536
EVLF P+ L D LN SQ A++ + +S+I GPPGTGKT T
Sbjct: 161 EVLFEIQEPQVQHDTEYLKDMKYFNQGLNESQQTAIEKCLTSTDVSMIHGPPGTGKTTTV 220
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTG--LKVVRVCAKSR----------- 583
++ Q V++ + ++ CAPSNIAVD + E+++ + L +VR+ +R
Sbjct: 221 VELILQSVEKQKAKIMACAPSNIAVDNIIERLYASNPKLNIVRIGHPARLMESVQQFCLD 280
Query: 584 EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK----- 638
I + N+IR M +N +KL + K +T E Y+MLKK+ ++
Sbjct: 281 ALISKRTDYGKQTNEIRRM-INKLNQKLQRTKSKTERKDIYGE--YKMLKKDLKQIEQNH 337
Query: 639 --SLLDNADVICCTCVGAGDPRLLKI--------KFHSILIDESMQATEPECMVPVILGA 688
+ ADVICCT AGD L + F ++IDE Q+ EP C +P+ A
Sbjct: 338 INDIFMRADVICCTLTSAGDKTLTRFINNNMQDSLFDMLVIDECAQSIEPACWIPIKF-A 396
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR-PFRLEVQYRMHPELSKFPS 747
K+L++ GDH QL V +A+R GLS SLFER++ + L+ QYRM+ ++ K+ +
Sbjct: 397 KKLVMAGDHKQLDATVKSDEASRKGLSLSLFERVMKFKNKISTMLDEQYRMNEKIMKWSN 456
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQEEIAGSGTSYVNRTE 803
Y+G+L+ R + +D ++ P+L T G G N ++
Sbjct: 457 QAMYDGNLKAHEDVKNRLM--VDLYAQSQEELMLSPLLLIDTAGALMYEGIDEQSENESK 514
Query: 804 ASNVE-----KITTRFIRCGMKPEQIGVITPYEGQ--------RAFLVQHMQYQ-GSLPA 849
+N E ++ + G++ IGVITPY Q R H + G +P
Sbjct: 515 YNNGECDLVIQLLKELVTMGIRKSDIGVITPYNAQVNQIKKAIRGAEELHTHVEIGQIPQ 574
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+ + IEV++VD FQGREK++II+S VRSN IGFL++ RR+NVA+TRAK +I +
Sbjct: 575 RGGERIEVSTVDGFQGREKEVIIISMVRSNPKGEIGFLSNERRMNVAVTRAKRLCAIIAD 634
Query: 910 PKVLSKQPLWNNLLNFYKEQKV 931
+S+ +L+ ++KE +
Sbjct: 635 SGTVSRNNFLKDLIQYFKENAI 656
>gi|168705200|ref|ZP_02737477.1| DNA-binding protein SMUBP-2 [Gemmata obscuriglobus UQM 2246]
Length = 766
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 234/458 (51%), Gaps = 44/458 (9%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN Q AV A+ P ++I GPPGTGKT T + +LV + G VL CAPSN AVD
Sbjct: 315 LNEPQRDAVAFALAAPDFAIIHGPPGTGKTTTVVEFIRKLVAR-GDKVLACAPSNHAVDN 373
Query: 564 LTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNMEMNS-----ELKKL 611
L EK+ G VR+ +R AID Q R + + + K
Sbjct: 374 LLEKLLGVGELPVRLGHPARVMPELRARAIDILAEKHPDARQARKVAREAFALFRQADKW 433
Query: 612 LQLKEETGELSSADEK------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
+ K + GE ++ ++ R L+ +A + +LD A V+C T G L + +F
Sbjct: 434 TREKPQPGEKAALRKEAREMLTEVRRLEASATERVLDEARVVCATLTGLDSQLLGQRRFD 493
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV- 724
++IDE+ Q+TEP VP +L A +++L GDHCQL P V+ +AA GLS SL ERLV
Sbjct: 494 VVVIDEACQSTEPAAWVP-LLRANKVVLAGDHCQLPPTVLSPEAAERGLSVSLMERLVRQ 552
Query: 725 LGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI--DFPW----PVPD 777
G RL VQ+RMH + F + FY+ L A E + + P P+ +
Sbjct: 553 FGPGASRLLTVQHRMHAAVMGFSNGEFYDSQL----VAHESVAAHLLCHLPGVARDPLTE 608
Query: 778 KPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQR 834
P+ F T G EE+ S N EA+ K + G+ P QIG+ITPY Q
Sbjct: 609 TPVQFIDTAGASYDEELEEDTGSRFNAQEATLAVKKVRALLALGIAPSQIGLITPYRAQV 668
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
L + + +P +E+ SVD FQGREK+ I++S VRSN+ IGFL+D RR N
Sbjct: 669 RLLREKL---ADVPG-----LEIDSVDGFQGREKEAIVVSLVRSNNEGEIGFLSDTRRTN 720
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
VA TRA+ ++VIG+ L+ P + +L ++++ L
Sbjct: 721 VAFTRARRKLLVIGDSATLASDPFYQRMLTYFEQIGAL 758
>gi|86451930|gb|ABC97360.1| UPF1 [Streblomastix strix]
Length = 277
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/240 (48%), Positives = 158/240 (65%), Gaps = 21/240 (8%)
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID----------FPWPVPDKPML 781
L++QYRMHPE++KF S FY+G L +GV A++R+ I FPWP P P++
Sbjct: 11 LQIQYRMHPEIAKFASEQFYKGLLIDGVNAEQRQYRIITKCGQQIIKQVFPWPNPKCPIM 70
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
F + +E+ GTSY+N TEA++VEKI T + G+K + IG+ITPY+ Q + ++
Sbjct: 71 FVNSTNEEK--KLGTSYLNNTEANHVEKILTHLLINGVKAKDIGIITPYKLQISCIIDQF 128
Query: 842 ---------QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
Q LP + YQ+++VASVDAFQGREKD II SCVRSN+ +GIGFLNDPRR
Sbjct: 129 KRVADNSQSQNGRGLPYETYQDVQVASVDAFQGREKDFIIFSCVRSNERKGIGFLNDPRR 188
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
LNVA+TRA+YG+I+IGN K L PLWNNLL +E+ +++G NN KE+ I+ Q
Sbjct: 189 LNVAITRARYGLIIIGNAKCLFSYPLWNNLLVHLQEKHCIIKGQFNNYKEAEIVLKTKMQ 248
>gi|19112847|ref|NP_596055.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582870|sp|O94387.1|YGSA_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C29A10.10c
gi|4007798|emb|CAA22438.1| tRNA-splicing endonuclease positive effector (predicted)
[Schizosaccharomyces pombe]
Length = 1944
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 284/589 (48%), Gaps = 131/589 (22%)
Query: 460 ALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL------NRSQVYAV 513
+LR+FA + R+L NV LP +F+ + N Q YA+
Sbjct: 1226 SLREFAALKSLRHLPLSQRILDANV------TRLPSNFTDDKKQKIMKSYGVNEPQAYAI 1279
Query: 514 -KHAIQRPLSLIQGPPGTGKT----------VTSAT------IVYQLVKQTGSPVLVCAP 556
++ +LIQGPPGTGKT +TS++ + Q K + + +L+CAP
Sbjct: 1280 YASSVNDGFTLIQGPPGTGKTKTILGMIGAVLTSSSQGLQFNVPGQTRKTSKNKILICAP 1339
Query: 557 SNIAVDQLTEKIHRTGL----------KVVRVC--------AKSREAIDSPVSFLALHNQ 598
SN A+D++ +I + G+ KV+RV AK + + + L N
Sbjct: 1340 SNAAIDEILLRI-KAGVYDHEGIKFFPKVIRVGFGDSISVHAKEFTLEEQMIKQMELTNL 1398
Query: 599 IRNMEMN----------SELKKLLQLKEE------TGELSSADEKRYR------------ 630
++ E N S +KK L+E+ TG+ SS E + R
Sbjct: 1399 KKDQEANNSSDTRKKYDSIIKKRDSLREDLEKFRSTGKNSSILEAQLREITKQKNMLEQS 1458
Query: 631 ----------------MLKKNAEKSLLDNADVICCTCVGAGDPRLLK--IKFHSILIDES 672
+LKK + LL AD++C T +G LL + F +++IDE+
Sbjct: 1459 LDDMRERQRSTNRNLDVLKKQIQNQLLQEADIVCATLSASGHELLLNAGLTFRTVIIDEA 1518
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR- 731
QA E ++P+ G + ++VGD QL P V+ K +A+ G SQSL+ +R F+
Sbjct: 1519 AQAVELSSIIPLKYGCESCVMVGDPNQLPPTVLSKTSAKFGYSQSLY-------VRMFKQ 1571
Query: 732 -------LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI-DFPWPVPDKPML-- 781
L +QYRM+PE+S+FPS FFY L +G +S + PW + P L
Sbjct: 1572 HNESACLLSIQYRMNPEISRFPSKFFYNSKLLDG-----PNMSAVTSRPW--HEDPQLGI 1624
Query: 782 --FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQRAF 836
F+ G E + S + Y N EAS + + R I+C + + +IGV+TPY Q
Sbjct: 1625 YRFFNVHGTEAFSNSKSLY-NVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQ--- 1680
Query: 837 LVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
VQ + Q+Q + I++ +++ +VD FQG+EKD+II SCVRS+ GIGFL D RRLN
Sbjct: 1681 -VQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLN 1739
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
VALTRAK + ++GN K L ++ ++ +L+ K + V + N K S
Sbjct: 1740 VALTRAKSSLYIVGNSKPLMQEDIFYSLIEDAKTRGVWRDLSANQFKNS 1788
>gi|388583155|gb|EIM23458.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 745
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 180/609 (29%), Positives = 281/609 (46%), Gaps = 92/609 (15%)
Query: 389 RLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFI 448
R +GD +KL + ++ WS L+L P F +D+
Sbjct: 161 RFRKGDIVKLSLMNNETEKWSATIES-------SSSTQLQLLFERKVPINTEDRFRIDYT 213
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR------------CHL--- 493
S+ R AL +D ++ + L G ++ ++L C +
Sbjct: 214 LNDVSYRRSLDALECLHLDPVEQASSSDNALKGTHLRDLLIEGSTNYDGIFANDCWIRSW 273
Query: 494 PKHFSAPN--------LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK 545
+S PN + +LN QV AV I SLIQGPPGTGKT T + + + K
Sbjct: 274 ASRYSKPNPIRVEGDPILNLNPRQVQAVALMIGNRASLIQGPPGTGKTATISNSINLMKK 333
Query: 546 --QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREA----IDSPVSFLALHNQI 599
+ P+L+ A +N+A D + + +T LK+ R+ SR A D+ V+ + H Q
Sbjct: 334 YFKIPHPILIAAHTNVATDNIASILSKTDLKITRLGHISRIAPELHKDTLVAQVEAHPQY 393
Query: 600 RNME---MNSE--LKKLLQ----LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCT 650
R ++ + SE KK L+E+ E + + + K + ++ +ADV+C T
Sbjct: 394 REVKHARIKSEGLFKKAYSMTGLLREQLNEEARKQRREATRITKEIQDKIIKSADVVCAT 453
Query: 651 CVGAGDPR-LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
C+G G+PR L I F + IDE QATEP ++P++ G + ++GDH QL P++ ++A
Sbjct: 454 CLG-GNPRDLTGIDFPIVFIDEGSQATEPTTLIPLMKGCSHMSIIGDHKQLAPIITSEEA 512
Query: 710 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGV-CADERKLSK 768
+R +VQYRMHP+LS+ P+N FY L +G ++ LS
Sbjct: 513 SRQ--------------------DVQYRMHPDLSEIPNNIFYNSQLIDGCRSSNGTLLSG 552
Query: 769 IDFPWP--VPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG--MKPEQI 824
P L +V E G S +N EA + I +K I
Sbjct: 553 YTPPHSSFTRKDSALAFVNHDHSE-TKDGESTMNEGEAQVIMTIIADLFEKNEDLKGTDI 611
Query: 825 GVITPYEGQRAFLVQ--------HMQYQGSL-PAKIYQ--EIEVASVDAFQGREKDLIIM 873
G+++PY Q L++ ++ L P ++++ +IEV +VD F+GREK +II+
Sbjct: 612 GIVSPYIAQTIELLRLINRDYYWRRRFADILGPQRVHELRQIEVKTVDGFEGREKQVIIL 671
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK--------QPLWNNLLNF 925
S RSN+ IGFL+DPRR NV LTRAK ++V+GN + L K LW L++
Sbjct: 672 SLTRSNEMGSIGFLDDPRRANVGLTRAKRCLMVVGNARTLEKGVVNMSKETQLWKELISL 731
Query: 926 YKEQKVLVE 934
K + VE
Sbjct: 732 CKSKSAYVE 740
>gi|255939099|ref|XP_002560319.1| Pc15g00940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584941|emb|CAP82980.1| Pc15g00940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 716
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 259/535 (48%), Gaps = 74/535 (13%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCHLPKHFSAPNLPDLNRSQVY 511
++ RM+ + K +S ++ GH ++ P F+ P+L N SQ
Sbjct: 184 TYRRMRQTMEKMVKMSESEYSHFMRVAFGHTTPLQLDTEACGPVEFTDPSL---NDSQKE 240
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ QLV Q VLVC PSN++VD + E++
Sbjct: 241 AIQFALASRDIALIHGPPGTGKTHTLIELILQLV-QRRKRVLVCGPSNVSVDNIVERLAP 299
Query: 571 TGLKVVRVCAKSR----------EAIDSPVSFLALHNQIRNM--EMNSELKKLLQLKEET 618
+ VVR+ +R E + + IR E + ++K +E
Sbjct: 300 KKVPVVRIGHPARLLPSVLEHSLEVLTQTSDAGGIVKDIRKEIDEKQASIRKTRSGRERR 359
Query: 619 GELSSAD--EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
G K +R + +L+ + V+ T GAG +L KF ++IDE+ QA
Sbjct: 360 GIYDDLKLLRKEFRERESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQAL 419
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMC-----KKAARAG------------------ 713
E +C +P +LGA +++L GDH QL P V K G
Sbjct: 420 EAQCWIP-LLGADKVVLAGDHLQLPPTVKSTGQNSKDQTSKGTEEKTGNNTDTETLKGVS 478
Query: 714 LSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
L ++LF+RL+ L GI+ L QYRMH ++ +FPS+ YE L R L ID
Sbjct: 479 LERTLFDRLLALHGPGIKRM-LTTQYRMHEKIMRFPSDELYEEKLMASDAVKARLL--ID 535
Query: 771 FPWPV-----PDKPMLFYVTQG-------QEEIAGSGT----SYVNRTEASNVEKITTRF 814
P+ V +P++F+ TQG ++EI+ G S N EA V +
Sbjct: 536 LPYEVEGTDDTQEPLVFWDTQGGDFPEKAEDEISQKGALLGDSKSNEMEAMVVARHVDNL 595
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
I G++PE I VITPY GQ A L + ++ + Y +E+ SVD FQGREK+ +++S
Sbjct: 596 IDAGIRPESIAVITPYNGQLALLSRMLREK-------YAGLELGSVDGFQGREKEAVVVS 648
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKE 928
VRSN +GFL + RRLNVA+TR K + + G+ + +S + +NF +E
Sbjct: 649 LVRSNAEHEVGFLGEKRRLNVAMTRPKRHLCICGDSETISHGSSFLKHWMNFLEE 703
>gi|189461769|ref|ZP_03010554.1| hypothetical protein BACCOP_02435 [Bacteroides coprocola DSM 17136]
gi|189431529|gb|EDV00514.1| putative DNA helicase [Bacteroides coprocola DSM 17136]
Length = 629
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 244/458 (53%), Gaps = 46/458 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN +Q A+ + + ++++ GPPGTGKT T +VY+ + + VLVCA
Sbjct: 183 FHPLRFPWLNATQEEAMNKVLHAKDVAIVHGPPGTGKTTTLVEVVYETLHRENQ-VLVCA 241
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ SR D +SF R E + + +L ++
Sbjct: 242 QSNMAVDWISEKLVDRGVSVLRIGNPSR-VNDKMLSF----TYERRFESHPDYPQLWSIR 296
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL + K R L+ +SL A VI CT VG+ + L
Sbjct: 297 KAIRELYARSRKGAEREAVRQKINSLKDRATELEIRINESLFSEARVIACTLVGSANRLL 356
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA E C +P I A ++IL GDHCQL P V +A RAGL +L
Sbjct: 357 TGQKFGTLFIDEAAQALEAACWIP-IRKADRVILAGDHCQLPPTVKAPEALRAGLGHTLM 415
Query: 720 ERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+ +V +P L++QYRM+ E+ +F S +FY G LQ+ R S +DF
Sbjct: 416 QTIV--KNKPDTVSLLKLQYRMNDEIMRFSSEWFYGGMLQSAPEVKYR--SILDF----- 466
Query: 777 DKPMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKP---EQI--GVI 827
D P+ + T+G EE G +N++EA ++E++ + G + E+I G+I
Sbjct: 467 DTPIEWINTEGLDCNEEFIGENYGRINKSEAELSIEQLKGYITKIGRERFLNERIDVGMI 526
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+PY+ Q +L + + + Q I + +VD FQG+E+D+I++S VR+N+ IGFL
Sbjct: 527 SPYKAQVQYL-RRLVRNDAFFKPYRQAITINTVDGFQGQERDVILISLVRANEEGQIGFL 585
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
ND RR+NVA+TRA+ +I++G+ L++ + L +
Sbjct: 586 NDLRRMNVAITRARMKLIILGDASTLTRHAFYKKLYTY 623
>gi|50293955|ref|XP_449389.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528703|emb|CAG62365.1| unnamed protein product [Candida glabrata]
Length = 1979
Score = 224 bits (570), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 258/517 (49%), Gaps = 104/517 (20%)
Query: 505 LNRSQVYA-VKHAIQRPLSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A V I SLIQGPPGTGKT T IV Y L + +P
Sbjct: 1295 LNESQARAIVNTVISSGFSLIQGPPGTGKTKTILGIVGYFLSLRNATPTGTIQAPTDKKS 1354
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGLK---------VVRVCA---------- 580
+L+CAPSN AVD++ ++ ++G+K ++R+
Sbjct: 1355 TTLDQMLKKPKILICAPSNAAVDEICLRL-KSGIKTKGQTVRPAIIRLGRTDVVNAELKD 1413
Query: 581 -------------KSREAIDSP------VSFLALHNQIRN-------------------- 601
KS E ++P S L+ Q+R+
Sbjct: 1414 VTLEEIVDKKLGDKSYEFTNNPDIEKKFQSLLSERRQLRDKLNAENGSPDSSMSTNDIAN 1473
Query: 602 --MEMNSELKKLLQLKEETGELSSADEKRYR---MLKKNAEKSLLDNADVICCTCVGAGD 656
M++ K + +L E E+ + YR + ++NA+ +L + D+IC T G+
Sbjct: 1474 LQMKIRELTKSINELGREKDEMREKNAINYRNRDLDRRNAQAQVLASCDIICSTLSGSAH 1533
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L L +KF +++IDE+ Q TE ++P+ G+K+ I+VGD QL P V+ A+
Sbjct: 1534 DVLATLGMKFETVVIDEACQCTELSAIIPLRYGSKRCIMVGDPNQLPPTVLSGAASNFKY 1593
Query: 715 SQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
+QSLF R+ +PF L+VQYRMHP +SKFPS FY+G L +G D L+K +
Sbjct: 1594 NQSLFVRMEK-NSKPFLLDVQYRMHPAISKFPSAEFYDGRLMDG--PDMESLNKRIWHEQ 1650
Query: 775 VPDKPMLFY-VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK----PEQIGVITP 829
P KP F+ +T GQ+ SY N+ E ++ + R +IGVI+P
Sbjct: 1651 EPFKPYKFFDITSGQQVQNVKTMSYTNKEEIEVAIEMVDKLFRLYDNKIDFSNKIGVISP 1710
Query: 830 YEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIGFL 887
Y+ Q + + M+Y G I + ++ ++D FQG+EK++II+SCVR++D Q G+GFL
Sbjct: 1711 YKEQIQRMRREFMRYFG---GSITKFVDFNTIDGFQGQEKEIIIISCVRADDSQSGVGFL 1767
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
D RR+NVALTRA+ I ++G+ K L K LW++L++
Sbjct: 1768 KDFRRMNVALTRARTSIWILGHQKSLRKSKLWSHLID 1804
>gi|219129129|ref|XP_002184749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403858|gb|EEC43808.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 268
Score = 224 bits (570), Expect = 3e-55, Method: Composition-based stats.
Identities = 121/273 (44%), Positives = 162/273 (59%), Gaps = 6/273 (2%)
Query: 644 ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPV 703
A VICCTC+G+G L + F +L+DE+ QATEP +VP++ G +QL+LVGDHCQL P
Sbjct: 1 AQVICCTCIGSGGDILDAMTFDRVLLDEATQATEPAVLVPLMRGCRQLVLVGDHCQLPPT 60
Query: 704 VMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
V+ +A G LF R+V G+ P+ L+ QYRMHP ++ FPS+ FY G L+NGV A E
Sbjct: 61 VLSTRAEEEGHGVPLFSRMVACGVPPYMLDTQYRMHPCIAMFPSDLFYGGLLRNGVSAPE 120
Query: 764 RKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGM-KPE 822
R+ FPWP + P+ F QG E G S N EA+ + ++ G
Sbjct: 121 RR-PLAGFPWPREEFPVAFLPIQGVE--MDDGVSKYNDAEAAAACNAVSLLLQGGQCSAS 177
Query: 823 QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
I V+TPY Q + + LP IEVASVD FQGREK+ ++ S VRSND+
Sbjct: 178 DIAVVTPYAAQAR--LIRRMIRRILPDSGPPFIEVASVDGFQGREKEAVVFSAVRSNDYG 235
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
IGF +D RR+NV+ TRA+ +IVIGN L +
Sbjct: 236 SIGFTSDWRRVNVSFTRARRALIVIGNEHTLRR 268
>gi|374384247|ref|ZP_09641773.1| putative DNA helicase [Odoribacter laneus YIT 12061]
gi|373228854|gb|EHP51157.1| putative DNA helicase [Odoribacter laneus YIT 12061]
Length = 645
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 167/535 (31%), Positives = 270/535 (50%), Gaps = 57/535 (10%)
Query: 430 KSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF 489
++S + T + + TS+ M ALR+ + A + E+L
Sbjct: 122 QASFATTLQQCTDLGIQLYFDETSYQSMFTALRETIAAKGNRLA---------ELREILS 172
Query: 490 RCHLPKHFSAPNL--PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
H + P L P LN Q AV H ++ + ++++ GPPGTGKT T +Y+ + +
Sbjct: 173 GAHPFRERKLPLLRFPWLNDQQEKAVNHVLRAQDIAIVHGPPGTGKTTTLVEAIYETLHK 232
Query: 547 TGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS 606
VLVCA SN+AVD ++EK+ G+ V+R+ +R D +SF R E +
Sbjct: 233 ENQ-VLVCAQSNMAVDWISEKLVDRGIHVLRIGNPTR-VNDKMLSF----TYERRFEAHP 286
Query: 607 ELKKLLQLKEETGELSSADEKR---------YRMLKKNA-------EKSLLDNADVICCT 650
+ +L +++ ELS KR + L+ A E+ L A VI T
Sbjct: 287 DYPELWNIRKTIRELSPKLRKRETREAVYSRLQHLRHRATELEIKIEQELFGEARVIAST 346
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
VG+ + L +F ++ IDE+ QA E C + I ++IL GDHCQL P + K+AA
Sbjct: 347 LVGSANKILEGKRFSTLFIDEAAQALEAACWI-AIRKTDRVILAGDHCQLPPTIKNKEAA 405
Query: 711 RAGLSQSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
+ GL+++L ++ V +P L++QYRMH ++ FPS +FY LQ R +
Sbjct: 406 QQGLARTLMQK--VAQRQPPAVSLLQIQYRMHEDIMHFPSRWFYHNCLQAAPEVRFRNIL 463
Query: 768 KIDFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIR----CGMK 820
+ D P+++ TQ EE AG S++NRTEA + + +I+ +
Sbjct: 464 EYD-------SPIVWCDTQAYDSSEETAGESLSHLNRTEALLLLQQLQEYIQKIGETRIL 516
Query: 821 PEQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
EQI G+I+PY+ Q ++ Q M+ + + I + +VD FQG+E+D+I +S VR+
Sbjct: 517 DEQIDFGLISPYKAQVRYIRQLMR-KNPFFKPFSRLISINTVDGFQGQERDVIFISLVRA 575
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
N+ IGFL D RR+NVA+TRA+ +I++G+ L P + L + +E+ V+
Sbjct: 576 NEAGNIGFLQDLRRMNVAITRARMKLILLGDALTLLHHPFYKALFEYIQEKGVIT 630
>gi|189463893|ref|ZP_03012678.1| hypothetical protein BACINT_00227 [Bacteroides intestinalis DSM
17393]
gi|189438466|gb|EDV07451.1| putative DNA helicase [Bacteroides intestinalis DSM 17393]
Length = 629
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 161/460 (35%), Positives = 238/460 (51%), Gaps = 42/460 (9%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 178 FRELYPVRF-----PWLNSTQENAVNKVLYSRDVSIVHGPPGTGKTTTLVEAIYETLHRE 232
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN AVD ++EK+ G+ V+R+ +R D +SF + SE
Sbjct: 233 -PQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNPTR-VNDKMLSF-TYERRFEGHPAYSE 289
Query: 608 LKKLLQLKEETG--------ELSSADEKRYRM------LKKNAEKSLLDNADVICCTCVG 653
L + + E G E SA + R+ L+ L DNA VI T V
Sbjct: 290 LWSIRKAIREMGGKHRGSYEERESARNRMSRLRDRATQLEIQINADLFDNAHVITSTLVS 349
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
+ L +F ++ IDE+ QA E C + I A +++L GDHCQL P + C +AAR G
Sbjct: 350 SNHRILNGHRFGTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARGG 408
Query: 714 LSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
L +L ER+V +P L+VQYRMH E+ KFPS +FY G L+ R + D
Sbjct: 409 LESTLMERVV--ANKPSTVSLLKVQYRMHEEIMKFPSQWFYNGELEAAPEIRYRGILDWD 466
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCGMK---PEQI-- 824
P D + + +EE G +N+ EA + +++ R G K E+I
Sbjct: 467 TPISWIDTSEMDF----KEEFVGETFGRINKAEADLLLQELKVYINRIGGKRVLEERIDF 522
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEI-EVASVDAFQGREKDLIIMSCVRSNDHQG 883
G+I+PY+ Q +L ++ GSL K Y+ + V +VD FQG+E+D+I +S VR+N+
Sbjct: 523 GIISPYKAQVQYLRNKIKASGSL--KPYRSLLTVNTVDGFQGQERDVIFISLVRANEEGQ 580
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
IGFLND RR+NVA+TRA+ ++++G L ++ L+
Sbjct: 581 IGFLNDLRRMNVAITRARMKLVILGEVNTLKHHKFYHKLI 620
>gi|294675290|ref|YP_003575906.1| helicase [Prevotella ruminicola 23]
gi|294473767|gb|ADE83156.1| putative helicase [Prevotella ruminicola 23]
Length = 539
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 250/461 (54%), Gaps = 44/461 (9%)
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC 554
+FS + LN +Q AV ++ + ++++ GPPGTGKT T +Y+ + + S VLVC
Sbjct: 88 NFSPLHFTYLNATQEDAVNKVLRAKDVAIVHGPPGTGKTTTLVEAIYETLMRE-SQVLVC 146
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQL 614
A SN+AVD ++E + G+ V+R+ +R D +SF R E + + + L L
Sbjct: 147 AQSNMAVDWISEILVDRGVNVLRIGNPTR-VNDKMLSF----TYERRFEAHPDYEMLWAL 201
Query: 615 KEETGELSS----ADEKRYRMLKKNAEKS----------LLDNADVICCTCVGAGDPRLL 660
++ E+ + D+K ++ +++ E++ L A VI CT VG+ + L
Sbjct: 202 RKAIREVRANRKRGDQKFHQKVERLKERATELELRIKNDLFSEARVIACTLVGSANKVLD 261
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
KF ++ IDE+ QA E C +P + ++IL GDHCQL P V C +A +AGL ++L E
Sbjct: 262 GQKFGTLFIDEAAQALEAACWIP-MRRVSRVILAGDHCQLPPTVKCYEALKAGLGKTLME 320
Query: 721 RLV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
R+V V+ + L++QYRM+ E+ +F S++FY +++ R + +D P
Sbjct: 321 RIVENKPEVVTL----LKMQYRMNEEIMRFSSDWFYNNQVESAPDVKYRSILDLDVPMTW 376
Query: 776 PDKPMLFYVTQG----QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--G 825
D + + +EE G +N+ EA + + F + G + E+I G
Sbjct: 377 IDTSQFDFPEESGITFKEEFVGESFGRINKAEAELTMLALQQYFEKIGKERIIKERIDVG 436
Query: 826 VITPYEGQRAFLVQHMQYQGSL-PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
VI+PY Q +L Q ++ + P K I + +VD FQG+E+D+I++S VR+ND I
Sbjct: 437 VISPYRAQVQYLRQQLKKREFFKPFK--SLISINTVDGFQGQERDIIMISLVRANDEGQI 494
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
GFL D RR+NVA+TRA+ +I++G+ L++ P + L ++
Sbjct: 495 GFLRDLRRMNVAITRARMKLIILGDASTLTRHPFYKKLYDY 535
>gi|329957754|ref|ZP_08298229.1| putative DNA helicase [Bacteroides clarus YIT 12056]
gi|328522631|gb|EGF49740.1| putative DNA helicase [Bacteroides clarus YIT 12056]
Length = 632
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 249/469 (53%), Gaps = 51/469 (10%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R +++ GPPGTGKT T +Y+ + +
Sbjct: 179 FRELYPVRF-----PWLNSTQETAVNKVLCARDTAIVHGPPGTGKTTTLVEAIYETLHRE 233
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN+AVD ++EK+ G+ V+R+ +R D +SF + N + E
Sbjct: 234 -PQVLVCAQSNMAVDWISEKLVDRGVNVLRIGNPTR-VNDKMLSF-TYERRFENHPLYPE 290
Query: 608 L----KKLLQL--KEETGELSSADEKRYRM-----------LKKNAEKSLLDNADVICCT 650
L K+L QL K G + R RM ++ NAE L D+A VI T
Sbjct: 291 LWSIRKELRQLGGKARHGSYDEREGIRSRMSRLRDRATTLEIQINAE--LFDSAHVIAST 348
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
V + L +F ++ IDE+ QA E C + I A +++L GDHCQL P + C +AA
Sbjct: 349 LVSSNHRLLNGRRFGTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCYEAA 407
Query: 711 RAGLSQSLFERLV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
R+GL Q+L E++V V+ + L+VQYRMH ++ +F S++FY+G+L+ R
Sbjct: 408 RSGLEQTLMEKVVANKPSVVSL----LKVQYRMHEDIMRFSSDWFYDGALEAAPEIRHRG 463
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI-RCG---MKP 821
+ D P D + + +EE G +N+ EA + K +I R G +
Sbjct: 464 ILDWDTPITWLDTSEMDF----KEEFVGETFGRINKEEAHLLLKELEAYIQRIGGSRILE 519
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L ++ SL + Y+ I V +VD FQG+E+D+I +S VR+
Sbjct: 520 ERIDFGLISPYKAQVQYLRGKIKSSASL--RPYRSLITVNTVDGFQGQERDVIFISLVRA 577
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
N+ IGFLND RR+NVA+TRA+ ++++G LS + LL + +
Sbjct: 578 NEEGQIGFLNDLRRMNVAITRARMKLVILGEATTLSHHTFYKRLLEYVR 626
>gi|406604174|emb|CCH44397.1| putative ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 1153
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 238/473 (50%), Gaps = 59/473 (12%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
N SQ A++H + ++++QGPPGTGKT T I+ QL + + P+LV A SNIA+D
Sbjct: 689 FNDSQKEAIQHVLNNAITVLQGPPGTGKTSTIYEIILQLFRNLKTWPILVVAASNIAIDN 748
Query: 564 LTEKIHRTG-LKVVRVCAKSREAIDSPVSFL---ALHNQI--RNMEMNSELKKLLQLKEE 617
+ EK+ L ++R+ + +E + L LH QI R E N ++ L L+
Sbjct: 749 IAEKLKADDDLNILRIVSTEKEKEYNEKHHLYDVCLHQQIFQRLPEQNKQI--ALDLRYN 806
Query: 618 TGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQAT 676
+S K+ ++ + + L+ A VI T V AG +L +K +++DES Q++
Sbjct: 807 RKPVSQNQYKKLLTIQNSIIEKLVAQAQVILTTSVVAGGYQLKNLKKLPVVIMDESTQSS 866
Query: 677 EPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLE 733
E ++P+ + G + + VGD QL + L QSLFER++ G P L
Sbjct: 867 EATSLIPLSMPGVDKFVFVGDDKQLSSF-----SEVPYLEQSLFERVLNNGTYRNPHMLN 921
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF--YVTQGQE-- 789
VQYRMHP++S+FP FY L NGV ++R + I+ P++F Y + QE
Sbjct: 922 VQYRMHPKISEFPIKRFYRNLLSNGVTEEDRFIEGIN--------PLVFVDYGSIHQESK 973
Query: 790 -----EIAGSGTSYVNRTEASNVEKITTRFIRC-GMKPEQIGVITPYEGQRAFLVQHMQY 843
G G ++ N EA + KI I + E I VITPY QR L Q
Sbjct: 974 VSNFKRFNGGGYTFTNHGEAKLILKILKDLIFTKNINKEDISVITPYSAQRDLLATTFQK 1033
Query: 844 QGSL--------------------PAKIYQ--EIEVASVDAFQGREKDLIIMSCVRSNDH 881
+ P I I V+S+DAFQGREK+ II SCVRSN+
Sbjct: 1034 DDLINPNNEDIEEEVDEDSLTNKKPTTIKTICNIMVSSIDAFQGREKNFIIFSCVRSNEE 1093
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS-KQPLWNNLLNFYKEQKVLV 933
IGF+ D RRLNVALTRA+ G+I++GN + +S PLW L + + +V
Sbjct: 1094 SKIGFVKDERRLNVALTRARNGLILVGNKQCMSLGDPLWKELTDHLESNDSIV 1146
>gi|423220918|ref|ZP_17207412.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae
CL03T12C61]
gi|392622396|gb|EIY16524.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae
CL03T12C61]
Length = 647
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 241/467 (51%), Gaps = 43/467 (9%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R ++++ GPPGTGKT T +Y+ + +
Sbjct: 195 FRELYPVRF-----PWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHRE 249
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN AVD ++EK+ G+ V+R+ +R D +SF + + E
Sbjct: 250 PQ-VLVCAQSNTAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLSF-TYERRFESHPAYPE 306
Query: 608 LKKLLQLKEETGE------LSSADEKRYRM---------LKKNAEKSLLDNADVICCTCV 652
L + + ETG S + R RM L+ L D+A VI T V
Sbjct: 307 LWGIRKSIRETGSRMRKGSYSEREGMRSRMSRLRDRATELEIQINTDLFDSARVIASTLV 366
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
+ L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C +AAR+
Sbjct: 367 SSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKCIEAARS 425
Query: 713 GLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
GL +L E++V L ++QYRMH + +FPS +FY G L+ + R S +DF
Sbjct: 426 GLDHTLMEKVVHKKPSAVSLLKMQYRMHESIMRFPSEWFYHGELE--AAPEVRYRSILDF 483
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPEQI 824
D PM + T EE G +N+ EA+ +E R + + E+I
Sbjct: 484 -----DTPMNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYINRIGKARILDEKI 538
Query: 825 --GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
G+I+PY+ Q +L ++ S I V +VD FQG+E+D+I +S VR+N+
Sbjct: 539 DFGLISPYKAQVQYLRSKIKV-SSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
IGFLND RR+NVA+TRA+ ++++G+ L+K P + L++F K++
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDAVTLTKHPFYKRLMSFIKKE 644
>gi|398398643|ref|XP_003852779.1| hypothetical protein MYCGRDRAFT_41426, partial [Zymoseptoria tritici
IPO323]
gi|339472660|gb|EGP87755.1| hypothetical protein MYCGRDRAFT_41426 [Zymoseptoria tritici IPO323]
Length = 1778
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 255/530 (48%), Gaps = 104/530 (19%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSP------------ 550
D+NR+Q A+ A++ SLIQGPPG+GKT T IV L+ T S
Sbjct: 1252 DVNRAQSEAINAALENEGFSLIQGPPGSGKTKTIVAIVGGLLTHTLSSAYKGATRISMPN 1311
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGLK----------VVRVCAKSR-EAIDS 588
+LVCAPSN AVD++ ++ + G+K VVR+ R A+
Sbjct: 1312 GNANADGAVKKLLVCAPSNAAVDEIVMRL-KEGVKTKDGRSHDINVVRIGRSERINAMVG 1370
Query: 589 PVSFLAL------------------------HNQIRNM--EM-----------NSELKKL 611
V+ L H Q+ + EM SE KKL
Sbjct: 1371 DVTMEELVQKKLGGNQMDEQKRKATAELFKEHQQVSHQLQEMYTQRNANEKMEESERKKL 1430
Query: 612 ----LQLKEETGELSS-ADEKRYRML---------KKNAEKSLLDNADVICCTCVGAGDP 657
++ EL S D+ + R L +K A++++LD A VIC T G+G
Sbjct: 1431 DDNIGHVRRRKAELGSRIDQTKDRELAAGREQELNRKRAQQAVLDEAHVICATLSGSGHD 1490
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L I+F +++IDE+ Q E ++P+ G + I+VGD QL P V K+AAR
Sbjct: 1491 MFQSLNIEFETVIIDEAAQCVEMSSLIPLKYGCVKCIMVGDPKQLPPTVFSKEAARFQYE 1550
Query: 716 QSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFPW 773
QSLF R+ L+ QYRMHP++S FPS FY+ L++G A RK S W
Sbjct: 1551 QSLFVRMQNNFPNEVHLLDTQYRMHPDISAFPSATFYDHKLKDGSNMAALRKKS-----W 1605
Query: 774 PVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGMKPEQIGVI 827
+ P FY +GQ A G S VN E ++TT F +IG+I
Sbjct: 1606 HASNLLAPYRFYDVKGQHSAAPKGFSLVNHAEVEVAMALYSRLTTDFGSTYDFSNRIGII 1665
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+ Q L + ++ + +I +++E + DAFQGRE ++II SCVR++D G+GFL
Sbjct: 1666 TPYKSQLELLRK--KFSTAFGLEILEKVEFNTTDAFQGREAEIIIFSCVRASDKGGVGFL 1723
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
D RR+NV LTRAK + V+GN + LS+ W L+ + + +V+G L
Sbjct: 1724 QDIRRMNVGLTRAKCSLWVLGNSESLSRGQYWRLLIEDVERKGAMVKGDL 1773
>gi|153808854|ref|ZP_01961522.1| hypothetical protein BACCAC_03154 [Bacteroides caccae ATCC 43185]
gi|149128680|gb|EDM19898.1| putative DNA helicase [Bacteroides caccae ATCC 43185]
Length = 647
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 241/467 (51%), Gaps = 43/467 (9%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R ++++ GPPGTGKT T +Y+ + +
Sbjct: 195 FRELYPVRF-----PWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHRE 249
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN AVD ++EK+ G+ V+R+ +R D +SF + + E
Sbjct: 250 PQ-VLVCAQSNTAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLSF-TYERRFESHPAYPE 306
Query: 608 LKKLLQLKEETGE------LSSADEKRYRM---------LKKNAEKSLLDNADVICCTCV 652
L + + ETG S + R RM L+ L D+A VI T V
Sbjct: 307 LWGIRKSIRETGSRMRKGSYSEREGMRSRMSRLRDRATELEIQINTDLFDSARVIASTLV 366
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
+ L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C +AAR+
Sbjct: 367 SSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKCIEAARS 425
Query: 713 GLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
GL +L E++V L ++QYRMH + +FPS +FY G L+ + R S +DF
Sbjct: 426 GLDHTLMEKVVHKKPSAVSLLKMQYRMHESIMRFPSEWFYHGELE--AAPEVRYRSILDF 483
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPEQI 824
D PM + T EE G +N+ EA+ +E R + + E+I
Sbjct: 484 -----DTPMNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYINRIGKARILDEKI 538
Query: 825 --GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
G+I+PY+ Q +L ++ S I V +VD FQG+E+D+I +S VR+N+
Sbjct: 539 DFGLISPYKAQVQYLRSKIKV-SSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDG 597
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
IGFLND RR+NVA+TRA+ ++++G+ L+K P + L++F K++
Sbjct: 598 QIGFLNDLRRMNVAITRARMKLVILGDAVTLTKHPFYKRLMSFIKKE 644
>gi|405119638|gb|AFR94410.1| DNA helicase [Cryptococcus neoformans var. grubii H99]
Length = 903
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 234/453 (51%), Gaps = 60/453 (13%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT-VTSATIVYQLVK---QTGSPVLVCA 555
P +P LNR+Q+ A+ + LSL+QGPPGTGKT V TI +L+K Q P+LVCA
Sbjct: 455 PYIP-LNRTQLRAMGMMLSEALSLVQGPPGTGKTRVIVETI--KLLKHHFQIPHPILVCA 511
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNM--EMNSELKKLLQ 613
+N+AVD L + + G+K +R R D L + + M + + ++K +
Sbjct: 512 HTNVAVDNLLAGMIKHGVKAIRTGMAERVPADLKQYSLEIKMESHPMWTSVQTMVEKAKR 571
Query: 614 LKEETGELSSADEKRYRML-------------KKNAEKSLLDNADVICCTCVGAGDPRLL 660
LK+E + + +R + + +++ + LL +ADV+C TC+ A L
Sbjct: 572 LKDEIFRMDFGNPERQQKISEMKKIWRQIWGIRQSITRELLLDADVVCTTCISAISANLN 631
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
I F + +DE+ ATEP ++P++ G+ + ++GDH QL PV++ + A GLS SLFE
Sbjct: 632 SIDFPIVFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFE 691
Query: 721 RLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW---PVP 776
RL+ P L+ QYRMHP L+ F S FY L+NG A ER + F P+P
Sbjct: 692 RLIHEKDVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIP 751
Query: 777 DKPMLFYVTQGQEEIAGSGT----------------SYVNRTEASNVEKITTRFIRCG-- 818
D + G+ ++G T S N EA + + T +
Sbjct: 752 DP------STGELRLSGEKTNLTFLNHSHLESPVLQSMANEGEAEIIVDVVTDLLHKNPD 805
Query: 819 MKPEQIGVITPYEGQRAFLVQHM---QYQGSLPAKI-------YQEIEVASVDAFQGREK 868
+K QIG+I PY GQ + + + + Q SL + Q++E+ +VD F+GREK
Sbjct: 806 LKGSQIGIIAPYLGQIKVVSETLFASRTQDSLKTILGDERTEEVQDVEIKTVDGFEGREK 865
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
++II S VRSN IGFL D RR+NV LTRA+
Sbjct: 866 EVIIFSTVRSNAGGYIGFLGDWRRVNVGLTRAR 898
>gi|29347483|ref|NP_810986.1| helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339383|gb|AAO77180.1| putative helicase [Bacteroides thetaiotaomicron VPI-5482]
Length = 652
Score = 223 bits (567), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 274/563 (48%), Gaps = 52/563 (9%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG--FSVDFIWKSTSFD 455
R S+D + + D DE + + SAGA E T V + TS+
Sbjct: 111 FRQSFDGKVNYMNFIATVSYAD---DERMVVVLPSAGALLELQTEEVLGVQLYFDETSYR 167
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
M AL + A + LLG + FR P F P LN +Q AV
Sbjct: 168 AMFEALEDTIRAKGNRLAELRDTLLG--TQKPGFRELYPVRF-----PWLNSTQETAVNK 220
Query: 516 AI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+ R ++++ GPPGTGKT T +Y+ + + VLVCA SN AVD + EK+ G+
Sbjct: 221 VLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQ-VLVCAQSNTAVDWICEKLVDRGVP 279
Query: 575 VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEK------- 627
V+R+ +R D +SF R E +S +L +++ E+ S +
Sbjct: 280 VLRIGNPTR-VNDKMLSF----TYERRFENHSAYPELWGIRKSIREMGSRMRRGSYSERE 334
Query: 628 --RYRM--LKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
R RM L+ A + L D+A VI T V + L +F ++ IDE+ QA
Sbjct: 335 GMRSRMSRLRDRATELEILINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDEAAQAL 394
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQ 735
E C + I A ++IL GDHCQL P + C +AAR GL +L E++V L +VQ
Sbjct: 395 EAACWI-AIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAVSLLKVQ 453
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSG 795
YRMH + +FPS +FY G L+ R + D P D + + EE G
Sbjct: 454 YRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFDTPMNWIDTSEMDF----HEEFVGES 509
Query: 796 TSYVNRTEAS----NVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQHMQYQGSLPA 849
+N+ EA+ +E +R + + E I G+I+PY+ Q +L + +GS
Sbjct: 510 FGRINKQEANLLLQELEAYISRIGKARILDESIDFGLISPYKAQVQYL--RSKIRGSSFL 567
Query: 850 KIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
+ ++ I V +VD FQG+E+D++ +S VR+N+ IGFLND RR+NVA+TRA+ ++++G
Sbjct: 568 RPFRSLITVNTVDGFQGQERDVVFISLVRANEDGQIGFLNDLRRMNVAITRARMKLVILG 627
Query: 909 NPKVLSKQPLWNNLLNFYKEQKV 931
+ L+K + L+ + +++ V
Sbjct: 628 DATTLTKHAFYRKLIQYIRQEAV 650
>gi|255727729|ref|XP_002548790.1| predicted protein [Candida tropicalis MYA-3404]
gi|240133106|gb|EER32662.1| predicted protein [Candida tropicalis MYA-3404]
Length = 788
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 247/469 (52%), Gaps = 57/469 (12%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQ AV ++ P++ +QGPPGTGKT IV QL++ P+LV A SN++VD +
Sbjct: 322 LNESQRRAVFTSLYNPVTFLQGPPGTGKTSAIYEIVVQLLQSNEYPILVTAASNVSVDNI 381
Query: 565 TEKIHRTGLK-VVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQ--LKEET 618
EK+ ++ + ++R+ A + A P++ + LH+ + + + E +++ ++
Sbjct: 382 AEKLMKSHPETLIRIPATQKLAEYDRKHPLASICLHHMVYD-SLTPEQQRIADRLYHKDV 440
Query: 619 GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATE 677
+ + + +K +L VI T AG ++ + + +LIDE+ Q+ E
Sbjct: 441 ASIDKCEFDSFCNARKKKSMEILSAHKVIFATTTVAGGGQIKSLPQVRVVLIDEATQSAE 500
Query: 678 PECMVPVILGA-KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEV 734
P ++P+ L K++++VGD QL + K LS S+FERL++ P L+
Sbjct: 501 PATLIPLALPRLKKVVVVGDDKQLSCLSEIK-----SLSMSMFERLLLNNTCANPLMLDT 555
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG------- 787
QYRMHP++S+FP F +G L +G+ + ER+ I P+ F+ T G
Sbjct: 556 QYRMHPQISEFPRLQFCKGKLTDGISSSERQEIGIT-------HPLYFWDTDGDAPESPI 608
Query: 788 -QEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
++ A G +YVN E + V+ + I+ + P +IGVIT Y GQR + ++
Sbjct: 609 QNKKKADKGFTYVNPFEVAYVQSVLRTLIQDKKINPSRIGVITSYAGQRDVISSNLLQDR 668
Query: 846 SL---PAKIYQEIE---------------------VASVDAFQGREKDLIIMSCVRSNDH 881
+ K+ QE++ +A+VDAFQGREKD+I+MSCVRSN
Sbjct: 669 IINPDAEKLKQEVDLVNQRVRSAKGATINFVAGIMIATVDAFQGREKDIIVMSCVRSNVD 728
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNLLNFYKEQ 929
IGFL D RRLNV+LTRAKY +I+IG+ + L ++ +W N F K +
Sbjct: 729 GSIGFLKDERRLNVSLTRAKYSMILIGDVECLKRRGKVWRNYFEFLKTK 777
>gi|198274180|ref|ZP_03206712.1| hypothetical protein BACPLE_00320 [Bacteroides plebeius DSM 17135]
gi|198272855|gb|EDY97124.1| putative DNA helicase [Bacteroides plebeius DSM 17135]
Length = 630
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 243/461 (52%), Gaps = 52/461 (11%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + VLVCA
Sbjct: 184 FQPVRFPWLNATQDEAVNKVLHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VLVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ SR D +SF R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVSVLRIGNPSR-VNDKMLSF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL + K R L+ +SL A VI CT VG+ + L
Sbjct: 298 KAIRELYTRSRKGNDRESIRQKINSLKDRATELEIRINESLFSEARVIACTLVGSANRLL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA E C +P + A ++I GDHCQL P V +A RAGL +L
Sbjct: 358 TGQKFGTVFIDEAAQALEAACWIP-LRKADRVIWAGDHCQLPPTVKNPEALRAGLGHTLM 416
Query: 720 ERLV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
+ +V V+ + L+VQYRM+ E+ +F S++FY G LQ+ R S +DF
Sbjct: 417 QAIVKNKPEVVSL----LKVQYRMNDEIMRFSSDWFYGGMLQSAPEVKYR--SILDF--- 467
Query: 775 VPDKPMLFYVTQG---QEEIAGSGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI--G 825
D P+ + T+G EE G +N+ EA +++ T+ R E+I G
Sbjct: 468 --DTPIEWVNTEGMDCNEEFVGENYGRINKPEAELSIGQLKEYITKIGRERFLEERIDVG 525
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
+I+PY+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ I
Sbjct: 526 LISPYKAQVQYLRQLVRKDAFF--KPYRSLITINTVDGFQGQERDVILISLVRANEDGQI 583
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
GFLND RR+NVA+TRA+ +I++G+ L+K + L +
Sbjct: 584 GFLNDLRRMNVAITRARMKLIILGDASTLTKHAFYKKLYEY 624
>gi|423226361|ref|ZP_17212827.1| hypothetical protein HMPREF1062_05013 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629789|gb|EIY23795.1| hypothetical protein HMPREF1062_05013 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 627
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 238/462 (51%), Gaps = 42/462 (9%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 178 FRELYPVRF-----PWLNSTQENAVNKVLNSRDVSIVHGPPGTGKTTTLVEAIYETLHRE 232
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN AVD + EK+ G+ V+R+ +R D +SF + SE
Sbjct: 233 -PQVLVCAQSNTAVDWICEKLVDRGVNVLRIGNPTR-VNDKMLSF-TYERRFEGHPAYSE 289
Query: 608 LKKLLQLKEETG--------ELSSADEKRYRM------LKKNAEKSLLDNADVICCTCVG 653
L + + E G E SA + R+ L+ L DNA VI T V
Sbjct: 290 LWSIRKAMREMGGKHRGSYEERESARNRMSRLRDRATQLEIQINADLFDNAHVIASTLVS 349
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
+ L F ++ IDE+ QA E C + I A +++L GDHCQL P + C +AAR G
Sbjct: 350 SNHRILNGRHFGTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARGG 408
Query: 714 LSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
L +L ER+V +P L+VQYRMH ++ KFPS +FY G LQ R + D
Sbjct: 409 LECTLMERVV--ANKPSTVSLLKVQYRMHEDIMKFPSQWFYNGELQAAPEIRYRGILDWD 466
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI-RCG---MKPEQI-- 824
P D + + +EE G +N+ EA + + +I R G M E+I
Sbjct: 467 TPINWIDTSDMDF----KEEFIGETFGRINKAEADLLLQELKAYIDRIGGKRMLEERIDF 522
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEI-EVASVDAFQGREKDLIIMSCVRSNDHQG 883
G+I+PY+ Q +L ++ GSL K Y+ + V +VD FQG+E+D+I +S VR+N+
Sbjct: 523 GIISPYKAQVQYLRNKIKASGSL--KPYRSLLTVNTVDGFQGQERDVIFISLVRANEDGQ 580
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
IGFLND RR+NVA+TRA+ ++++G + + + + L+ +
Sbjct: 581 IGFLNDLRRMNVAITRARMKLVILGEAETMKRHKFYKELIEY 622
>gi|389581976|dbj|GAB64376.1| erythrocyte membrane-associated antigen [Plasmodium cynomolgi strain
B]
Length = 2167
Score = 222 bits (566), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 225/441 (51%), Gaps = 28/441 (6%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ-TGSPVLVCAPSNI 559
NLP LN SQ A A+ R L+L+QGPPGTGKT + I+ +Q + +L A SN+
Sbjct: 1657 NLP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHRQNSNKKILAVADSNV 1715
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
A + L E + + ++ VRV A S DS A+ + R K LL+L++
Sbjct: 1716 AANNLVEGLKKRNIQAVRVGAGS----DSDFHEEAIMDFHR-------YKDLLKLRKNNL 1764
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
+ K +++K + +V+ TCVG+G KF ++IDE Q+ EP
Sbjct: 1765 Q------KEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPS 1818
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRM 738
++P+ L+L+GDH QL P ++ A + GL +SL ER V+ I P L Q RM
Sbjct: 1819 NLIPLGHNCNNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPVHLLTTQRRM 1878
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ----GQEEIAGS 794
H + FP+ FY+ L+ +E + F WP P + F G +
Sbjct: 1879 HLSICTFPNIHFYDNKLKTENVTEENRPIIKGFLWPNPKCRLAFIDVSLGKPGSKFENSY 1938
Query: 795 GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
GTS N E + + + G + ++IG++T Y+ Q+ L + +Q + P +
Sbjct: 1939 GTSKFNLYEIEPLISVLKSIVNEGCVSVDEIGILTAYDAQKVKLKKAVQ--DAFPYEAAC 1996
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
IE+ S+D FQG+EKDLI+ S VRSN + +GFL D RRLNV LTRAK G+I+ G+ L
Sbjct: 1997 RIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLTRAKRGVILFGDQFTL 2056
Query: 914 SKQPL-WNNLLNFYKEQKVLV 933
+ P W LN+ ++ +V
Sbjct: 2057 ANDPENWLPWLNWISSKRAVV 2077
>gi|353241966|emb|CCA73744.1| related to regulator of nonsense transcripts 1 [Piriformospora
indica DSM 11827]
Length = 850
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 161/519 (31%), Positives = 257/519 (49%), Gaps = 64/519 (12%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVT--SATIVYQLVKQTGSPV 551
P H + LN SQ A+ + LSL+QGPPGTGKT T A + + + P+
Sbjct: 315 PVHKEGDPVVTLNASQTQAIALMFKERLSLVQGPPGTGKTRTIIEALRILKSHFKVEHPL 374
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL 611
LVC +N+AVD L E I G+ +RV + ++ + + ++ M ++++++
Sbjct: 375 LVCTYTNVAVDNLVEGIADAGMNPLRVGNEGGAQMERHPRWPEV---VKIMNEIAQIRQI 431
Query: 612 L-QLKEETGELSSADEK--------RYRMLKKNAEK-------SLLDNADVICCTCVGAG 655
+L+ E G S +K + +L+++ K + +ADVIC TC+ AG
Sbjct: 432 RDRLRREMGSAPSDQQKESISRLGNKIHLLRESKAKLESAMRYMIFKSADVICTTCITAG 491
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
+ F + +DE+ +TEP ++P++ G K L L+GDH QL PV+ + A GL
Sbjct: 492 SSAFRMMDFPVVFLDEASMSTEPASLIPLMHGCKHLALIGDHKQLPPVITSELAKEGGLG 551
Query: 716 QSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD------------ 762
+SLFERL+ G P L+ QYRMHP +S FPS+ FY +L++G +
Sbjct: 552 KSLFERLIEEGSVPSVMLDTQYRMHPSISAFPSDEFYGKALRDGTISPAGGVPATLAPPH 611
Query: 763 ----ERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI--R 816
R+ SK+ + P + ++ EI+ S N E V + +
Sbjct: 612 SMHLARRKSKL-----TGEIPAVLFIHHDNHEIS-RDRSRANLEEMKIVAAVLEDLLLMN 665
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI-----------YQEIEVASVDAFQG 865
G++ IG+I+PY Q L + ++ S Q++E+ +VD F+G
Sbjct: 666 PGLRGRDIGIISPYVAQVRMLNKMLKEDSSWADAFRDALGDPRCHELQDVEIKTVDGFEG 725
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
REK++II S VR+N IGFL D RR+NVALTRAK + V+G+ LSK N L+
Sbjct: 726 REKEIIIFSTVRNNSWGHIGFLADRRRMNVALTRAKRALFVVGSISTLSKGRHGGNFLDP 785
Query: 926 YKEQ------KVLVEGPLNNLKESLILFSKPKQYFKKNN 958
E+ K++V+G + ++ I F K++F + N
Sbjct: 786 EGEEMEKDVAKMVVQGSGDEWRK-YIKFILAKEFFIEFN 823
>gi|156094736|ref|XP_001613404.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802278|gb|EDL43677.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2314
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 225/441 (51%), Gaps = 28/441 (6%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ-TGSPVLVCAPSNI 559
NLP LN SQ A A+ R L+L+QGPPGTGKT + I+ +Q + +L A SN+
Sbjct: 1804 NLP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHRQNSNKKILAVADSNV 1862
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
A + L E + + ++ VRV A S DS A+ + R K LL+L++
Sbjct: 1863 AANNLVEGLKKRNIQAVRVGAGS----DSDFHEEAIMDFHR-------YKDLLKLRKNNL 1911
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
+ K +++K + +V+ TCVG+G KF ++IDE Q+ EP
Sbjct: 1912 Q------KEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPS 1965
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRM 738
++P+ L+L+GDH QL P ++ A + GL +SL ER V+ I P L Q RM
Sbjct: 1966 NLIPLGHNCNNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPVHLLTTQRRM 2025
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ----GQEEIAGS 794
H + FP+ FY+ L+ +E + F WP P + F G +
Sbjct: 2026 HLSICTFPNIHFYDNKLKTENVTEENRPIIKGFLWPNPKCRLAFIDVSLGKPGSKFENAY 2085
Query: 795 GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
GTS N E + + + G + ++IG++T Y+ Q+ L + +Q + P +
Sbjct: 2086 GTSKFNLYEIEPLISVLKSIVNEGCVSVDEIGILTAYDAQKVKLKKAVQ--DAFPYEAAC 2143
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
IE+ S+D FQG+EKDLI+ S VRSN + +GFL D RRLNV LTRAK G+I+ G+ L
Sbjct: 2144 RIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLTRAKRGVILFGDQFTL 2203
Query: 914 SKQPL-WNNLLNFYKEQKVLV 933
+ P W LN+ ++ +V
Sbjct: 2204 ANDPENWLPWLNWISSKRAVV 2224
>gi|283779091|ref|YP_003369846.1| AAA ATPase [Pirellula staleyi DSM 6068]
gi|283437544|gb|ADB15986.1| AAA ATPase [Pirellula staleyi DSM 6068]
Length = 639
Score = 222 bits (565), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 160/455 (35%), Positives = 231/455 (50%), Gaps = 41/455 (9%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
L+ SQ VK A+ + I GPPGTGKT T ++ QLV + G+ VL APSN+AVD
Sbjct: 190 LDPSQQEGVKLALSAEDFACIHGPPGTGKTTTLVAVIRQLVAR-GAKVLATAPSNLAVDH 248
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL----LQLKEETG 619
L EK+H G++V+R+ +R + + L L Q+ N + +KL L+LK+
Sbjct: 249 LLEKLHLAGVRVLRLGHPAR--VQESLHHLVLDEQVENHPDVAVARKLVRDALRLKDRAA 306
Query: 620 ELSSAD-----------EKR-----YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ + A E R R ++ + LLD+ADV+ T G L +
Sbjct: 307 KFTRAKPPPGYKQELRAEARELFSDARRIEAGVVRYLLDSADVVLATLTGIDATVLEDRR 366
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F +IDE+ QATEP C P +L A ++IL GD QL P ++ +AAR GL++SL ERL+
Sbjct: 367 FDVAVIDEAAQATEPACW-PALLRADRVILAGDPFQLPPTIISPEAARGGLARSLMERLL 425
Query: 724 VLGIRPF--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV--PDKP 779
RL VQYRMH + F S FYE L LS + P
Sbjct: 426 ETSTTTISHRLAVQYRMHQSIMAFSSAEFYEQGLTADPSVASHLLSDLSEVTPTDRTSTA 485
Query: 780 MLFYVTQGQ--EEIAGSG-TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+ F T G +E AGS S N EA V K+ G+ E I +I+PY Q
Sbjct: 486 LEFIDTAGAGYDERAGSSQESRENPQEAELVVKLALALRDAGVAAEAIAIISPYAAQVRL 545
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
L + + G+L I+V ++D FQGRE + +I+S VRSN IGFL D RR+NVA
Sbjct: 546 LRRLLD--GTL-------IDVDTIDGFQGRESEAVIISLVRSNATGEIGFLADVRRMNVA 596
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
+TRA+ +I+IG+ + + +L++ + + +
Sbjct: 597 ITRARRKLIIIGDSATIGGHDFYARMLSWVEREGI 631
>gi|294936357|ref|XP_002781732.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892654|gb|EER13527.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 503
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 216/416 (51%), Gaps = 34/416 (8%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSAT-----IVYQLVKQTGSPVLVCAPSNI 559
L +Q+ A++ + + P++LIQGPPGTGKT T+ +V ++ + VLV A SN
Sbjct: 68 LTEAQLNAIRSSWETPITLIQGPPGTGKTHTAVALVKHWVVNKITARGEGKVLVVADSNA 127
Query: 560 AVDQLTEKIHRTGLKVVRVC------AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQ 613
A D + + + G++ RV +RE D + L +R+ L + +
Sbjct: 128 AADNIRGLMVKAGIECYRVGRAQETDGGTREVSDDVLRKLEGTRAVRDYRRAVILGDIHK 187
Query: 614 LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESM 673
L ++ +K+ +D V+ TC+G+G L + F S++IDE
Sbjct: 188 LP---------------YFRQRIDKAAVDEYQVLVATCIGSGHQLLDSVDFESVIIDECT 232
Query: 674 QATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE 733
QATEP +VP+ GAK+ +L+GDH QL V C A GL SLFERL + G L+
Sbjct: 233 QATEPASLVPLARGAKRCVLLGDHKQLPATVHCNTAKSGGLGISLFERLAMSGTPVHLLD 292
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
+Q RMHP +++F ++ FY+ +++ V +R L WP P + T + IAG
Sbjct: 293 IQRRMHPSIAEFSNHHFYDNRIKHEV--SDRPLIP-GLRWPNPQIRVALVDT--SQLIAG 347
Query: 794 S---GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
GTS +NR EA + + G P QIG++ PY Q++ ++ ++ +
Sbjct: 348 ESKVGTSLMNREEARLLLDALYDAVANGTPPGQIGLVVPYNAQKSHVIAALKEDTRFSPE 407
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
+++ +VD FQG EK+LI S VRSN +GF+ DPRR+NV LTRA+ G++V
Sbjct: 408 QRAAVQINTVDGFQGHEKELIFFSAVRSNVSGQVGFIADPRRMNVMLTRARRGLVV 463
>gi|145353141|ref|XP_001420883.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581119|gb|ABO99176.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 388
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 173/278 (62%), Gaps = 8/278 (2%)
Query: 644 ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPV 703
A +C TC G+G L +I F ++++DE+ Q TEP +VP+ G +QL+LVGDH QL P
Sbjct: 54 AQAVCATCSGSGSDFLDRINFSAVMLDEASQVTEPMALVPLANGCQQLVLVGDHKQLPPT 113
Query: 704 VMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
V+ ++A AG++ SLF+RL+ G++P+ L+ Q+RMHP +S FPS FY+G +++G A E
Sbjct: 114 VVSREAELAGMTLSLFDRLIRAGVKPYLLDTQFRMHPAISYFPSLSFYKGLVKSGTPAAE 173
Query: 764 RKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG-MKPE 822
R K F WP+P P+ F + SY N+ EA V KI T ++ ++
Sbjct: 174 RPAPK-GFAWPIPSVPIAFCPSPQDAMETNDNMSYSNKVEAERVMKILTDLLQAKELREC 232
Query: 823 QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE-----IEVASVDAFQGREKDLIIMSCVR 877
IG++TPY Q L++ M + + +E +EV+SVD +QGREK+L+I+S VR
Sbjct: 233 NIGIVTPYASQ-VRLIRSMLRARGVRTGVDRETGEAGVEVSSVDGYQGREKELMIVSTVR 291
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
+N+ IGF+ D RR NV LTRA+ G+IV+G+ LS+
Sbjct: 292 ANNLNTIGFVADARRCNVTLTRARRGVIVVGHASTLSR 329
>gi|383123539|ref|ZP_09944218.1| putative DNA helicase [Bacteroides sp. 1_1_6]
gi|251839647|gb|EES67730.1| putative DNA helicase [Bacteroides sp. 1_1_6]
Length = 648
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 273/569 (47%), Gaps = 64/569 (11%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG--FSVDFIWKSTSFD 455
R S+D + + D DE + + SAGA E T V + TS+
Sbjct: 107 FRQSFDGKVNYMNFIATVSYAD---DERMVVVLPSAGALLELQTEEVLGVQLYFDETSYR 163
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
M AL + A + LLG + FR P F P LN +Q AV
Sbjct: 164 AMFEALEDTIRAKGNRLAELRDTLLG--TQKPGFRELYPVRF-----PWLNSTQETAVNK 216
Query: 516 AI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+ R ++++ GPPGTGKT T +Y+ + + VLVCA SN AVD + EK+ G+
Sbjct: 217 VLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQ-VLVCAQSNTAVDWICEKLVDRGVP 275
Query: 575 VVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMNSELKKLLQLKEETG 619
V+R+ +R D +SF + IR EM S +++ G
Sbjct: 276 VLRIGNPTR-VNDKMLSFTYERRFENHPSYPELWGIRKSIR--EMGSRMRR--------G 324
Query: 620 ELSSADEKRYRM--LKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
S + R RM L+ A + L D+A VI T V + L +F ++ ID
Sbjct: 325 SYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTLVSSNHRLLNGRRFPTLFID 384
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF 730
E+ QA E C + I A ++IL GDHCQL P + C +AAR GL +L E++V
Sbjct: 385 EAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAV 443
Query: 731 RL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
L +VQYRMH + +FPS +FY G L+ R + D P D + + E
Sbjct: 444 SLLKVQYRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFDTPMNWIDTSEMDF----HE 499
Query: 790 EIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQHMQY 843
E G +N+ EA+ +E +R + + E I G+I+PY+ Q +L +
Sbjct: 500 EFVGESFGRINKQEANLLLQELEAYISRIGKARILDESIDFGLISPYKAQVQYL--RSKI 557
Query: 844 QGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
+GS + ++ I V +VD FQG+E+D++ +S VR+N+ IGFLND RR+NVA+TRA+
Sbjct: 558 RGSSFLRPFRSLITVNTVDGFQGQERDVVFISLVRANEDGQIGFLNDLRRMNVAITRARM 617
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
++++G+ L+K + L+ + +++ V
Sbjct: 618 KLVILGDATTLTKHAFYRKLIQYIRQEAV 646
>gi|291228827|ref|XP_002734379.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 2926
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 236/488 (48%), Gaps = 61/488 (12%)
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV-------KQTGSPVLVC 554
LP LN+ Q++A+K +++ +++QGPPGTGK+ T+A + V G +L C
Sbjct: 2438 LPSLNQDQIHAIKMSLENKFTIVQGPPGTGKSYTAANLANAFVLSNRDEPSMKGGRILYC 2497
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL--------------------- 593
APSN AVD + + R + +R+ +KS E D PV L
Sbjct: 2498 APSNKAVDVAADYLKRFDMNTIRMYSKSMEGKDYPVPGLTDITRYKRGNNAESNPALDDI 2557
Query: 594 ALHNQIR--NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTC 651
ALH IR + + E+++ S D + Y+ L K AEK L DVI CTC
Sbjct: 2558 ALHRVIRKASSKCGKEIREFDSRFRNAIPQSKQDIENYKALIKKAEKDALIGCDVILCTC 2617
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA-KQLILVGDHCQLGPVVMCKKAA 710
A RL K+ +IDE+ TEPE +VP++ +Q++L+GDH QL P+V ++
Sbjct: 2618 SEAASKRLDKLGILQCIIDEAGMCTEPETLVPLVRAKPEQVVLIGDHRQLQPIVPHNLSS 2677
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK-- 768
+ GL SL ER RL++QYRMH + +FP++ FY+G L+ +R K
Sbjct: 2678 QMGLGVSLLERYCDEN-HFIRLKMQYRMHDAICEFPNSQFYDGELETAETVLKRSQFKTT 2736
Query: 769 IDFPWPVPDK-PMLFYVTQGQEEI------AGSGTSYVNRTEASNVEKITTRFI-RCGMK 820
+D WP P +F G+EE GS S N E +V +I R ++
Sbjct: 2737 MDGVWPGGKHVPTVFCHCVGREESLKVTTDEGSEQSKKNLQEVKDVVRIAKIMSKRYSLR 2796
Query: 821 PEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND 880
+I +++ Y Q + +G L Q I V SV FQG E+D II+S VRS
Sbjct: 2797 TSRIQILSQYRA------QCHEIKGELKRANCQSIGVNSVIGFQGSEQDYIILSTVRSLP 2850
Query: 881 HQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+ I GF+ D ++NVALTRA+ G+I+IGN +L W LL Y+
Sbjct: 2851 QREIEERPTKGWLKKNLGFVTDEHQINVALTRARKGLIIIGNANLLRTDHNWRKLLEEYR 2910
Query: 928 EQKVLVEG 935
+ V+
Sbjct: 2911 RKNCCVDA 2918
>gi|366999100|ref|XP_003684286.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
gi|357522582|emb|CCE61852.1| hypothetical protein TPHA_0B01790 [Tetrapisispora phaffii CBS 4417]
Length = 2074
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 258/530 (48%), Gaps = 110/530 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV---------------KQTG 548
LN SQ AV + + SLIQGPPGTGKT T IV ++ +Q
Sbjct: 1340 LNDSQAMAVVNTVAADGFSLIQGPPGTGKTKTILGIVGHILTTQDALPKNIIKVPGEQNS 1399
Query: 549 SP----------VLVCAPSNIAVDQLTEKIHRTG----------LKVVRV---------- 578
SP VL+CAPSN AVD++ ++ R G L VVR+
Sbjct: 1400 SPALEQTLKRKKVLICAPSNAAVDEICLRL-RNGIATNNGNPFLLSVVRIGRSDAVNAAI 1458
Query: 579 --------------------------------CAKSREA-----------IDSPVSFLAL 595
C R A IDS +S +
Sbjct: 1459 KDLTLEELVEKKVSEKNYNMTSNPDLERKFSSCVTKRRAARAKLDSENGAIDSTMSTEEI 1518
Query: 596 HN-QIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
N Q+ E++ ++ +L + ++E E +S + + + ++NA+ +L N+++IC T G+
Sbjct: 1519 TNLQLEIRELSKQINQLGKERDEIREQNSINYRNRELDRRNAQARVLANSNIICSTLSGS 1578
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L L +KF +++IDE+ Q TE ++P+ GAK+ I+VGD QL P V+ KA+
Sbjct: 1579 AHDVLSTLGVKFDTVIIDEACQCTELSAIIPLRYGAKRCIMVGDPNQLPPTVLSSKASSL 1638
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ P+ L VQYRMHP +S FPS FY+G L++G D ++K P
Sbjct: 1639 NYDQSLFVRMEK-KCSPYLLNVQYRMHPSISAFPSLEFYDGKLKDG--PDMANITK--RP 1693
Query: 773 WPVPDK--PMLFY-VTQGQEEIAGSGTSYVNRTEASN----VEKITTRFIRCGMKPEQIG 825
W D P F+ + G+ E SY N EA V+ + RF +IG
Sbjct: 1694 WHSIDSLGPYKFFDIISGRHEQNSRTMSYNNPEEARVAVELVDFLLKRFENKYDFTGKIG 1753
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH---Q 882
VI+PY+ Q L + + L + Y ++ ++D FQG+EK++II+SCVR+ND
Sbjct: 1754 VISPYKEQVFKLRREFRNHFGLLIEKY--VDFNTIDGFQGQEKEIIILSCVRANDSDHAS 1811
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
G+GFL D RR+NVA TRAK + ++G+ + L + LWN+L+ K++ L
Sbjct: 1812 GVGFLKDFRRMNVAFTRAKSSLWILGHHRSLKRDKLWNHLITNAKQRNKL 1861
>gi|345518256|ref|ZP_08797710.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
gi|254835551|gb|EET15860.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
Length = 630
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 245/459 (53%), Gaps = 48/459 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D ++F R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLAF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYGRSRKGAERENIRQKINSLKDRATELEIRVNEALFGEARVIACTLVSSANRIL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA EP C + I A ++IL GD+CQL P + C +AAR GL ++L
Sbjct: 358 TGRKFSTLFIDEAAQALEPACWI-AIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLM 416
Query: 720 ERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+ + +P L+VQYRM+ E+ +F S +FY+G L++ R S +D+
Sbjct: 417 QEIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYR--SILDY----- 467
Query: 777 DKPMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCG---MKPEQI--GVI 827
D P+ + T+G EE G +N+ EA+ ++ ++T + G E+I G+I
Sbjct: 468 DTPIEWINTEGMECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLI 527
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+PY+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGF
Sbjct: 528 SPYKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGF 585
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
LND RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 586 LNDLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|226481519|emb|CAX73657.1| Egg protein CP82 [Schistosoma japonicum]
Length = 512
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/138 (70%), Positives = 119/138 (86%)
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G+ P IGVITPYEGQRA+L ++ Y GSL AK+YQEIE+ASVDAFQGREKD II+
Sbjct: 1 MLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLNAKLYQEIEIASVDAFQGREKDYIIL 60
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR+N++QGIGFLNDPRRLNVALTRA+YG+IV+GNPK L KQPLWN LL+FY++Q +LV
Sbjct: 61 SCVRANENQGIGFLNDPRRLNVALTRARYGLIVVGNPKALCKQPLWNQLLHFYRDQHLLV 120
Query: 934 EGPLNNLKESLILFSKPK 951
EGPLNNL E ++ F +PK
Sbjct: 121 EGPLNNLSEYMLQFPRPK 138
>gi|224536127|ref|ZP_03676666.1| hypothetical protein BACCELL_00992 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522261|gb|EEF91366.1| hypothetical protein BACCELL_00992 [Bacteroides cellulosilyticus
DSM 14838]
Length = 627
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 160/462 (34%), Positives = 238/462 (51%), Gaps = 42/462 (9%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 178 FRELYPVRF-----PWLNSTQENAVNKVLNSRDVSIVHGPPGTGKTTTLVEAIYETLHRE 232
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN AVD + EK+ G+ V+R+ +R D +SF + SE
Sbjct: 233 -PQVLVCAQSNTAVDWICEKLVDRGVNVLRIGNPTR-VNDKMLSF-TYERRFEGHPAYSE 289
Query: 608 LKKLLQLKEETG--------ELSSADEKRYRM------LKKNAEKSLLDNADVICCTCVG 653
L + + E G E SA + R+ L+ L DNA VI T V
Sbjct: 290 LWSIRKAMREIGGKHRGSYEERESARNRMSRLRDRATQLEIQINADLFDNAHVIASTLVS 349
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
+ L F ++ IDE+ QA E C + I A +++L GDHCQL P + C +AAR G
Sbjct: 350 SNHRILNGRHFGTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARGG 408
Query: 714 LSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
L +L ER+V +P L+VQYRMH ++ KFPS +FY G LQ R + D
Sbjct: 409 LECTLMERVV--ANKPSTVSLLKVQYRMHEDIMKFPSQWFYNGELQAAPEIRYRGILDWD 466
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCGMK---PEQI-- 824
P D + + +EE G +N+ EA + +++ R G K E+I
Sbjct: 467 TPINWIDTSDMDF----KEEFIGETFGRINKAEADLLLQELKVYIDRIGGKRVLEERIDF 522
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEI-EVASVDAFQGREKDLIIMSCVRSNDHQG 883
G+I+PY+ Q +L ++ GSL K Y+ + V +VD FQG+E+D+I +S VR+N+
Sbjct: 523 GIISPYKAQVQYLRNKIKASGSL--KPYRSLLTVNTVDGFQGQERDVIFISLVRANEDGQ 580
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
IGFLND RR+NVA+TRA+ ++++G + + + + L+ +
Sbjct: 581 IGFLNDLRRMNVAITRARMKLVILGEAETMKRHKFYKELIEY 622
>gi|145494398|ref|XP_001433193.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400310|emb|CAK65796.1| unnamed protein product [Paramecium tetraurelia]
Length = 1493
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 249/497 (50%), Gaps = 90/497 (18%)
Query: 506 NRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATI---VYQLVKQTGS----PVLVCAP 556
N +Q ++K I ++ + L+QGPPGTGKT T + VY+ +K T +L+CAP
Sbjct: 821 NETQANSIKEIILKEKGICLLQGPPGTGKTHTLIGLLSGVYEYMKLTNKFPRKKILICAP 880
Query: 557 SNIAVDQLTEKIHRTG-----------LKVVRVCAKSREAIDSPV--------------- 590
SN A+D++ +I + G ++R+ E + S +
Sbjct: 881 SNAAIDEIILRILQKGGLFDSQGNSRQANLIRIGLLDEENVHSDIIKKVSLEDLAQHKLF 940
Query: 591 ---SFLALHNQIRNMEMNSEL-----------KKLLQ----------LKEETGELSSADE 626
F A +Q ++ EL KKL Q +KE+ + S +
Sbjct: 941 STQKFNAQQDQKTTADLRIELCQIQNHIKKLEKKLNQHGIPGEERRIIKEQINQFSDLRK 1000
Query: 627 KRYRMLKKNAE-------------KSLLDNADVICCTCVGAGDPRLLKI--KFHSILIDE 671
+ L K E + LL++A++IC T +G +L K + +++DE
Sbjct: 1001 SKQEYLDKTRENKKMYKEYYNQFCEKLLNDAEIICSTLSSSGSDKLSKYLDQIELLIVDE 1060
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
+ Q TEP ++P+ LG +++IL+GD QL + + ++SLFER++ +P+
Sbjct: 1061 AAQCTEPSNIIPLRLGIQKMILIGDPKQLPATTFSPVSNQTLYNRSLFERILDNNFQPYF 1120
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEE 790
L++QYRMH E+ FPS +FY+ L++ + R D P +LF + GQE+
Sbjct: 1121 LDIQYRMHSEIRMFPSEYFYQNKLKDHESTNNR-----DLPTNFFKNRVLFLDILDGQEQ 1175
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMK--PEQ-IGVITPYEGQRAFLVQHMQYQGSL 847
GTS +N EAS I I+C + P Q IGVI Y+ Q ++ ++ + S
Sbjct: 1176 --KDGTSNINEQEAS----IIVNSIKCIKEEFPTQTIGVICAYKSQVRYIKTLLKQKYSD 1229
Query: 848 PAKI-YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
+ + I + +VD+FQG+EKD+I+ SCVRS+ GIGFLND RR+NVALTRAK + +
Sbjct: 1230 ESLFDHSTISINTVDSFQGQEKDIILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFI 1289
Query: 907 IGNPKVLSKQPLWNNLL 923
+GN LSK LW ++L
Sbjct: 1290 LGNAITLSKSDLWKSML 1306
>gi|294896732|ref|XP_002775704.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
gi|239881927|gb|EER07520.1| splicing endonuclease positive effector sen1, putative [Perkinsus
marinus ATCC 50983]
Length = 674
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 253/493 (51%), Gaps = 84/493 (17%)
Query: 504 DLNRSQVYAVKHA--IQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
DLN++Q+ AV A + P++L+QGPPGTGKT T +V L+K T + +++CAPSN AV
Sbjct: 154 DLNQAQLRAVTSAADVSSPITLVQGPPGTGKTKTIVAMVKALLKTTNT-LVICAPSNAAV 212
Query: 562 DQLTEKIHRT---------GLKVVRV--CAK-SREAI--------------DSPVSFLAL 595
D+L +I + +V+RV C + +RE + +
Sbjct: 213 DELASRIMASWPPSKSLSDAHQVLRVGSCRRITREEVKTISLEELAKTGGREKVYELRGF 272
Query: 596 HNQIRNMEMNSELKKLLQ-LKEETGEL-SSADEKRYRMLKKNAE---------------- 637
H + R E+ E++KL + +KE TG+ S A R R++ + E
Sbjct: 273 HKEKRE-EILKEIRKLEEGIKELTGDNDSEAKADRGRLVARKKELKEELDKLKQRSSRAL 331
Query: 638 --------KSLLDNADVICCTCVGAGDPRLLK---IKFHSILIDESMQATEPECMVPVIL 686
K LL A V+ T G + + + +IDE+ QA EP ++P+ L
Sbjct: 332 SRSRDEACKHLLGRARVVLGTLSSFGSSTITSNFVARDATCIIDEACQAIEPSALIPLKL 391
Query: 687 -GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKF 745
G K+L+LVGD QL V+ +A +SLFERL+ G + L+ QYRM PE++ F
Sbjct: 392 RGVKRLVLVGDPQQLPATVVSMEAKALRYERSLFERLIGAGWKAHLLDEQYRMLPEIANF 451
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPV--PDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
S FY+G L+ FP + P +P+LF ++ E G GTS VN E
Sbjct: 452 ASKEFYDGRLKTA--------ESCRFPSSLGQPLRPLLFLDSRLGSEQRG-GTSLVNTEE 502
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A V K+ + +GV+TPY Q + + + G+ EV +VDA+
Sbjct: 503 AIIVGKMVEAV---ANRKLSVGVVTPYRQQALLIRRTVSMSGA---------EVDTVDAY 550
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP-LWNNL 922
QG+EKD+IIMSCVRSN GIGF+ D RRLNV+LTRAKY + ++GN + L + +W +L
Sbjct: 551 QGQEKDIIIMSCVRSNRDGGIGFVADYRRLNVSLTRAKYALWIVGNAESLGRSSKVWADL 610
Query: 923 LNFYKEQKVLVEG 935
+++ +E + LV+
Sbjct: 611 IHYCQEHESLVDA 623
>gi|300773891|ref|ZP_07083760.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
gi|300760062|gb|EFK56889.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
Length = 634
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 267/545 (48%), Gaps = 66/545 (12%)
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKF--AVDDQSVSAYIYHRL 479
GDE+ + L+ + VD ++ S+ M AL++ A DD+ + I +
Sbjct: 101 GDEMKISLRVDELPDWVRSGKLGVDLLFDENSYQEMFKALKRADAARDDKKMGPLINMLI 160
Query: 480 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSAT 538
H D H+ ++ LN Q+ AV I P L+++ GPPGTGKT T
Sbjct: 161 DQHVHDS----DHMVSDHQINSITGLNEYQLKAVNQIIASPHLTIVHGPPGTGKTTTLVQ 216
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
+ L+++ +LV APSN AVD LTEK+H TG+KVVR+ + + + L L +
Sbjct: 217 GIKALLQKYPDQILVTAPSNTAVDLLTEKLHETGVKVVRIGNPVK--VSEQLHELTLDGK 274
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRY---------------RMLKKNAE------ 637
+ + M ELK + + + +++ ++ + + L K AE
Sbjct: 275 LESHPMQKELKTIRKKADVFRDMAKKYKRNFGKAERDQKKALFQEAKNLMKEAEQIAQYI 334
Query: 638 -KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGD 696
K +LD A VI T VG+ + + ++ IDE+ QA EP C +P IL + +LIL GD
Sbjct: 335 QKDILDQAQVITATLVGSNHSAIQDRTYAAVFIDEAGQALEPACWIP-ILKSDKLILAGD 393
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF---RLEVQYRMHPELSKFPSNFFYEG 753
H QL P + K ++ ++L E+LV P L QYRMH ++ ++PS Y
Sbjct: 394 HLQLPPTIKSKDSSVRAFHETLMEKLV--HAYPSCVCLLRQQYRMHQDIMQYPSAALYNN 451
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR-TEASNVEKIT- 811
+L +++L+ D LF T AG+G V T SN+E+
Sbjct: 452 TLFAEPSIAQQELTP-------GDNAFLFIDT------AGAGFDEVQEDTAISNIEEANF 498
Query: 812 -----TRFIRCGMKPEQ------IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
T+++ K E IG+I+PY Q+ L++ + + KI I++ ++
Sbjct: 499 LIQHLTQYLAAFKKDENMSPFPNIGLISPYR-QQVLLLKELIRNDEM--KISVSIQIQTI 555
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
D FQG+E+D+I +S RSN IGFLN+ RR+NVA+TRA+Y +I+IG+ + + P +
Sbjct: 556 DGFQGQERDIIYISLTRSNAEGQIGFLNEIRRMNVAMTRARYKLIIIGDSSTIGQHPFYA 615
Query: 921 NLLNF 925
++ +
Sbjct: 616 GMIQY 620
>gi|293373939|ref|ZP_06620281.1| putative DNA helicase [Bacteroides ovatus SD CMC 3f]
gi|292631160|gb|EFF49796.1| putative DNA helicase [Bacteroides ovatus SD CMC 3f]
Length = 649
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 263/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 143 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 200
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 201 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 255
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 256 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 314
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
H IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 315 HKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 364
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 365 IASTLVSSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 423
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+R GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 424 IEASRGGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRG 483
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCGMK---P 821
+ D P D + + E+ G +N+ EA+ + +++ T R G K
Sbjct: 484 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKKRILD 539
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 540 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 597
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 598 NEDGQIGFLNDLRRMNVAITRARMKLVILGDASTLAKHPFYKRLMLFIKKE 648
>gi|357060587|ref|ZP_09121355.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
gi|355375892|gb|EHG23160.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
Length = 640
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 239/463 (51%), Gaps = 60/463 (12%)
Query: 501 NLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
NLP LN SQ AV + R L ++ GPPGTGKT T + +++++ V+VCA SN+
Sbjct: 178 NLPWLNASQEQAVNDVLAARDLMIVHGPPGTGKTTTLVEAIMEVMRRE-PQVMVCAQSNM 236
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD ++E++ G+ V+R+ SR D +SF R E + + L ++
Sbjct: 237 AVDWISEQLADRGVSVLRIGNPSR-VTDKMLSF----TYERRFESHPDYSTLWSIRRTIR 291
Query: 620 EL--------SSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKF 664
+L S + ++ L++ A++ +L D + V+ CT VG+ + L I F
Sbjct: 292 QLYATPRKGRSESFHQKITRLRERADELELRIRNALFDQSRVVACTLVGSANQLLQGIHF 351
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
H++ IDE+ QA EP C + + + +L GDHCQL P + A GL ++L E L
Sbjct: 352 HTLFIDEAAQALEPACWI-ALRKCDRFVLAGDHCQLPPTIKSNAARYGGLDKTLMETLAE 410
Query: 725 LGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQ-------NGVCADERKLSKIDFPWPVP 776
RL VQYRM+ L +F S +FYEG LQ G+ AD
Sbjct: 411 THPEAVRLLTVQYRMNEALMRFSSEWFYEGKLQAAPEVSHRGIMAD-------------M 457
Query: 777 DKPMLFYVTQGQ---------EEIAGSGTSYVNRTEA----SNVEKITTRFIRCGMKPEQ 823
D+P+++ T G+ E+ G+ +N+ EA + + T R R + E+
Sbjct: 458 DEPLVWVDTAGEDSEGQEDFHEQFIGASYGRINKAEARLTLATLIDYTERIGRQRLLEER 517
Query: 824 I--GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
I G+I+PY+ Q +L ++ L + + I + +VDAFQG+E+D+I++S VR+N+
Sbjct: 518 IDIGIISPYKAQVQYLRALLKKNAYLRP-LRKSITINTVDAFQGQERDVILVSLVRANET 576
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
IGFLND RR+NVA+TRA+ +I++G L + + L +
Sbjct: 577 GEIGFLNDLRRMNVAITRARMKLIILGASTTLCRHKFYKKLYD 619
>gi|298385061|ref|ZP_06994620.1| DNA helicase [Bacteroides sp. 1_1_14]
gi|298262205|gb|EFI05070.1| DNA helicase [Bacteroides sp. 1_1_14]
Length = 651
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 272/569 (47%), Gaps = 64/569 (11%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG--FSVDFIWKSTSFD 455
R S+D + + D DE + + SAGA E T V + TS+
Sbjct: 111 FRQSFDGKVNYMNFIATVSYAD---DERMVVVLPSAGALLELQTEEVLGVQLYFDETSYR 167
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
M AL + A + LLG + FR P F P LN +Q AV
Sbjct: 168 AMFEALEDTIRAKGNRLAELRDTLLG--TQKPGFRELYPVRF-----PWLNSTQETAVNK 220
Query: 516 AI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+ R ++++ GPPGTGKT T +Y+ + + VLVCA SN AVD + EK+ G+
Sbjct: 221 VLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQ-VLVCAQSNTAVDWICEKLVDRGVP 279
Query: 575 VVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMNSELKKLLQLKEETG 619
V+R+ +R D +SF + IR EM S +++ G
Sbjct: 280 VLRIGNPTR-VNDKMLSFTYERRFENHPSYPELWGIRKSIR--EMGSRMRR--------G 328
Query: 620 ELSSADEKRYRM--LKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
S + R RM L+ A + L D+A VI T V + L +F ++ ID
Sbjct: 329 SYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTLVSSNHRLLNGRRFPTLFID 388
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF 730
E+ QA E C + I A ++IL GDHCQL P + C +AAR GL +L E++V
Sbjct: 389 EAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAV 447
Query: 731 RL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
L +VQYRMH + +FPS +FY G L+ R + D P D + + E
Sbjct: 448 SLLKVQYRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFDTPMNWIDTSEMDF----HE 503
Query: 790 EIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQHMQY 843
E G +N+ EA+ +E +R + + E I G+I+PY+ Q +L +
Sbjct: 504 EFVGESFGRINKQEANLLLQELEAYISRIGKARILDESIDFGLISPYKAQVQYL--RSKI 561
Query: 844 QGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
+GS + ++ I V +VD FQG+E+D++ +S VR+N+ IGFLND RR+NVA+TRA+
Sbjct: 562 RGSSFLRPFRSLITVNTVDGFQGQERDVVFISLVRANEDGQIGFLNDLRRMNVAITRARM 621
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
++++G+ L+K + L+ + K+ +
Sbjct: 622 KLVILGDATTLTKHAFYRKLITYIKQSSL 650
>gi|221051872|ref|XP_002257512.1| erythrocyte membrane-associated antigen,putative [Plasmodium knowlesi
strain H]
gi|193807342|emb|CAQ37847.1| erythrocyte membrane-associated antigen,putative [Plasmodium knowlesi
strain H]
Length = 2351
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 225/441 (51%), Gaps = 28/441 (6%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ-TGSPVLVCAPSNI 559
NLP LN SQ A A+ R L+L+QGPPGTGKT + I+ +Q + +L A SN+
Sbjct: 1841 NLP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHRQNSNKKILAVADSNV 1899
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
A + L E + + ++ VRV A S DS A+ + R K LL+L++
Sbjct: 1900 AANNLVEGLKKRNIQAVRVGAGS----DSDFHEEAIMDFHR-------YKDLLKLRKNNL 1948
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
+ K +++K + +V+ TCVG+G KF ++IDE Q+ EP
Sbjct: 1949 Q------KEAKVMKALLFLEAVRKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPS 2002
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRM 738
++P+ L+L+GDH QL P ++ A + GL +SL ER V+ I P L Q RM
Sbjct: 2003 NLIPLGHNCTNLVLIGDHKQLPPTIISSDATKLGLDRSLLERFVMAKIAPVHLLTTQRRM 2062
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ----GQEEIAGS 794
H + FP+ FY+ L+ +E + F WP P + F G +
Sbjct: 2063 HLSICTFPNIHFYDNKLKTENVTEENRPIIKGFLWPNPKCRLAFIDVSLGKPGSKFENAY 2122
Query: 795 GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
GTS N E + + + G + ++IG++T Y+ Q+ L + +Q + P +
Sbjct: 2123 GTSKFNLYEIEPLIAVLKSIVNEGCVSVDEIGILTAYDAQKVKLKKAVQ--DAFPYEAAC 2180
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
IE+ S+D FQG+EKDLI+ S VRSN + +GFL D RRLNV LTRAK G+I+ G+ L
Sbjct: 2181 RIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLKDARRLNVMLTRAKRGVILFGDQFTL 2240
Query: 914 SKQP-LWNNLLNFYKEQKVLV 933
+ P W LN+ ++ +V
Sbjct: 2241 ANDPENWLPWLNWISSKRAVV 2261
>gi|357509763|ref|XP_003625170.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355500185|gb|AES81388.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 645
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 232/455 (50%), Gaps = 42/455 (9%)
Query: 505 LNRSQVYAVKHAIQRPLS-----LIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
+N++ Y+ K AI + LS L+ GPPGTGKT T I+ Q VK+ GS +L CA SNI
Sbjct: 191 INKNLDYSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNI 249
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALH-------NQIRNMEMNSELK 609
AVD + E++ +K+VR+ +R + +DS + L N IR EM
Sbjct: 250 AVDNIVERLVPHRVKLVRIGHPARLLPQVVDSALDAQVLRGDNSGLANDIRK-EMKVLNG 308
Query: 610 KLLQLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
KLL+ KE E LS + KR ++ A ++ +DVI T +GA +L
Sbjct: 309 KLLKTKEKNTRREIQKELRTLSREERKRQQL----AVTDVIKTSDVILTTLIGASSKKLG 364
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
F ++IDE+ QA E C +P++ G + IL GDH QL P + +A + GL ++LFE
Sbjct: 365 NTSFDLVIIDEAAQALEVACWIPLLKGTR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFE 423
Query: 721 RLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID-FPWPVPD 777
RL L L VQYRMH + + S Y ++ C L ++
Sbjct: 424 RLAELYGDEVTSMLTVQYRMHQLIMDWSSKELYNSKVKAHACVASHMLYDLEGVKKTSST 483
Query: 778 KPMLFYV-TQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQR 834
+P L + T G EE S +N E+ R ++ G+ P IG+ITPY Q
Sbjct: 484 EPTLLLIDTAGCDMEEKKDEEDSTLNEGESEVAMAHAKRLVQSGVLPSDIGIITPYAAQV 543
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
L + SL ++IE+++VD FQGREK+ II+S VRSN + +GFL+D RR+N
Sbjct: 544 VLLKMLKNKENSL-----KDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMN 598
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
VA+TRA+ ++ + + +S L+ +++E
Sbjct: 599 VAVTRARRQCCIVCDTETVSSDGFLKRLIEYFEEH 633
>gi|338532930|ref|YP_004666264.1| putative DNA helicase [Myxococcus fulvus HW-1]
gi|337259026|gb|AEI65186.1| putative DNA helicase [Myxococcus fulvus HW-1]
Length = 639
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 170/515 (33%), Positives = 243/515 (47%), Gaps = 53/515 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+D + ++DR++ L++ D+ + LLG+ R P+ P
Sbjct: 125 LRLDVVPNDVTYDRLRAGLQRIKALDKGAERHRREVLLGNEPP----RYDKPRELE-PTR 179
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN Q A A+ L+ GPPGTGK+ A I Q V G +L A SN AV
Sbjct: 180 P-LNPEQQDATARALAAEDFFLVHGPPGTGKSTVLAEIAAQAVAD-GKRLLCTAASNAAV 237
Query: 562 DQLTEKIHRTGLKVVRV------CAK------------------SREAIDSPVSFLALHN 597
D L + GL+ +RV A+ SR+ D S L
Sbjct: 238 DHLLDLCLDKGLRAIRVGHPARVAARLQEHTLDIVVESHPDRGVSRDLFDEAYSLLGYAR 297
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSA-DEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
+ R + E + + T E DE R L++ A +S+L NADVIC T
Sbjct: 298 RQRTQGRSRE--RFANARASTSEAKGMLDEAR--ALERKAVRSVLANADVICVTLSSLDS 353
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
L +F L+DE+ QATEP ++ L A ++IL GD QL P V+ ++AA+AGL
Sbjct: 354 GVLAGEQFDLALLDEATQATEPLALLG-FLRAPRVILAGDPQQLPPTVLSQEAAKAGLGV 412
Query: 717 SLFERLVV---LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
SLFERL+ G++ L QYRM+ + FPS Y G L+ +R L + P
Sbjct: 413 SLFERLLKDHGEGVKRM-LREQYRMNARIMDFPSREMYGGELRAHPSVADRTLDAVLTPG 471
Query: 774 PVPDKPMLFYV-TQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
D P + Y+ T G +EE+ + S N EA VE + G+ P ++ VITP
Sbjct: 472 ADVDAPPVLYLDTAGKGFEEEVEPTTKSLFNPGEAGLVEARVRALLAAGLSPRELAVITP 531
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q L + ++ + E+EV +VDAFQGREKD +I+S RSN +GFL D
Sbjct: 532 YSAQAHQLRERIE-------ALSPEVEVDTVDAFQGREKDAVIVSLTRSNSEGQLGFLTD 584
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
RR+NVALTRA+ + V+G+ LS P + +
Sbjct: 585 LRRMNVALTRARRHLFVVGDSATLSGHPFYTRFVE 619
>gi|319643934|ref|ZP_07998509.1| helicase [Bacteroides sp. 3_1_40A]
gi|317384458|gb|EFV65425.1| helicase [Bacteroides sp. 3_1_40A]
Length = 630
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 245/459 (53%), Gaps = 48/459 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D ++F R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLAF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYGRSRKGAERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRIL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA EP C + I A ++IL GD+CQL P + C +AAR GL ++L
Sbjct: 358 TGRKFSTLFIDEAAQALEPACWI-AIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLM 416
Query: 720 ERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+ + +P L+VQYRM+ E+ +F S +FY+G L++ R S +D+
Sbjct: 417 QEIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYR--SILDY----- 467
Query: 777 DKPMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCG---MKPEQI--GVI 827
D P+ + T+G EE G +N+ EA+ ++ ++T + G E+I G+I
Sbjct: 468 DTPIEWINTEGMECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLI 527
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+PY+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGF
Sbjct: 528 SPYKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGF 585
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
LND RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 586 LNDLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|423312487|ref|ZP_17290424.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
gi|392688175|gb|EIY81464.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
Length = 630
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 245/459 (53%), Gaps = 48/459 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D ++F R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLAF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYGRSRKGAERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRIL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA EP C + I A ++IL GD+CQL P + C +AAR GL ++L
Sbjct: 358 TGRKFSTLFIDEAAQALEPACWI-AIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLM 416
Query: 720 ERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+ + +P L+VQYRM+ E+ +F S +FY+G L++ R S +D+
Sbjct: 417 QEIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYR--SILDY----- 467
Query: 777 DKPMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCG---MKPEQI--GVI 827
D P+ + T+G EE G +N+ EA+ ++ ++T + G E+I G+I
Sbjct: 468 DTPIEWINTEGMECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLI 527
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+PY+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGF
Sbjct: 528 SPYKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGF 585
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
LND RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 586 LNDLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|326471889|gb|EGD95898.1| DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 716
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 261/538 (48%), Gaps = 77/538 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL-FRCHLPKHFSAPNLPDLNRSQVY 511
++ RM + K +S + + L GH L F P F P+L D SQ
Sbjct: 180 TYRRMNQTMAKLEKLQESEHSQLIRVLFGHTAPSPLDFESVGPLEFMDPSLND---SQKE 236
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ QLV Q VLVC PSNI+VD + E++
Sbjct: 237 AIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISVDNIVERLAL 295
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
+ +VR+ +R +D + L+ ++ ++++ + K+ K G
Sbjct: 296 HKVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERR 355
Query: 624 A---DEKRYRMLKKNAEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A D K R + E +DN + V+ T GAG +L KF +LIDE+ QA
Sbjct: 356 AIYGDLKELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAR 415
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA------------------------ 712
E +C +P +L A +++L GDH QL P + K ++ +
Sbjct: 416 EAQCWIP-LLPASRVVLAGDHLQLPPTIKSKSSSNSDQTNSALWDKEDLRFNELSNTFDM 474
Query: 713 -GLSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
L +LF+RL+ L GI+ L QYRMH ++ FPS+ YE L + ER L
Sbjct: 475 RNLEITLFDRLLSLHGTGIKRM-LTTQYRMHQKIMDFPSDELYESKLISADAVRERLLK- 532
Query: 769 IDFPWPVPD-----KPMLFYVTQG----QEEIAGSGTSY--------VNRTEASNVEKIT 811
D P+ V D +P++FY TQG ++ +G S N EA+ V +
Sbjct: 533 -DLPYEVEDTDDTREPLVFYDTQGGDFPEKSPDSNGISAKSLLVESKCNDMEAAVVARHV 591
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
+ G++PE I VITPY Q A L Q ++ + + +E+ SVD FQGREK+ +
Sbjct: 592 ENLVSAGVRPEDIAVITPYNAQVALLSQLLKEK-------FPTLELGSVDGFQGREKEAV 644
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKE 928
++S VRSN +GFL + RRLNVA+TR + + + G+ + +S P + F +E
Sbjct: 645 VVSLVRSNQDHEVGFLGEKRRLNVAMTRPRRHLCICGDSETVSSGSPFLKRWMAFLEE 702
>gi|294778267|ref|ZP_06743693.1| putative DNA helicase [Bacteroides vulgatus PC510]
gi|294447895|gb|EFG16469.1| putative DNA helicase [Bacteroides vulgatus PC510]
Length = 630
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 245/459 (53%), Gaps = 48/459 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D ++F R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLAF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYGRSRKGAERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRIL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA EP C + I A ++IL GD+CQL P + C +AAR GL ++L
Sbjct: 358 TGRKFSTLFIDEAAQALEPACWI-AIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLM 416
Query: 720 ERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+ + +P L+VQYRM+ E+ +F S +FY+G L++ R S +D+
Sbjct: 417 QEIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYR--SILDY----- 467
Query: 777 DKPMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCG---MKPEQI--GVI 827
D P+ + T+G EE G +N+ EA+ ++ ++T + G E+I G+I
Sbjct: 468 DTPIEWINTEGMECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLI 527
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+PY+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGF
Sbjct: 528 SPYKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGF 585
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
LND RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 586 LNDLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|407927432|gb|EKG20325.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 686
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 251/498 (50%), Gaps = 73/498 (14%)
Query: 493 LPKHFSAPNL-------PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLV 544
LP ++S L P LN SQ A++ A+ R ++LI GPPGTGKT T ++ QL+
Sbjct: 188 LPSNYSEVGLDKLQWIDPSLNDSQKDAIRFAMASREVALIHGPPGTGKTHTLIELILQLL 247
Query: 545 KQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFL-------A 594
KQ +LVC PSNI+VD + E++ + ++R+ +R I+ + L A
Sbjct: 248 KQDLR-LLVCGPSNISVDNIVERLAPHKVPIIRLGHPARLLPSVINHSLDVLTRTSDAAA 306
Query: 595 LHNQIRNMEMNSE---LKKLLQLKEETGELSSADEKR--YRMLKKNAEKSLLDNADVICC 649
+ IR EM+++ +KK +E S E R YR ++ L+ + V+
Sbjct: 307 IVQDIRK-EMDAKQASIKKTRNGRERKAIYSEMRELRKDYRERERRCVDQLVKGSKVVLA 365
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV----- 704
T GAG L +F ++IDE+ QA E +C VP +L AK+++L GDH QL P +
Sbjct: 366 TLHGAGGYHLKDQQFDVVIIDEASQALEAQCWVP-LLSAKKVVLAGDHLQLPPTIKSLNS 424
Query: 705 -------MCKKAAR------AGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNF 749
KAA+ L Q+LF+RL+ L + L QYRMH ++ FPS
Sbjct: 425 KTQKESETSDKAAQKERGKSVTLEQTLFDRLLALHGPSIKRMLTTQYRMHEKIMAFPSQE 484
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPD-----KPMLFYVTQG-------QEEIAGS--- 794
YE L R L+ D P+ V + +P++F+ TQG ++E G
Sbjct: 485 LYESKLVAAESVKARLLA--DLPYEVQETEDTREPVVFWDTQGGDFPEKSEDEDTGKKSS 542
Query: 795 --GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
G S N EA+ V + + G++ E I V+TPY Q A L Q ++ Q +
Sbjct: 543 LLGDSKSNEMEAALVRLHVGKLVEAGVRAEDIAVVTPYNAQLAVLSQLLKEQ-------F 595
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
IE+ SVD FQGREK+ +++S VRSN +GFL + RRLNVA+TR K + VIG+ +
Sbjct: 596 AGIELGSVDGFQGREKEAVVVSLVRSNAEHEVGFLGEKRRLNVAMTRPKRHLCVIGDSET 655
Query: 913 LSK-QPLWNNLLNFYKEQ 929
+ + ++F +EQ
Sbjct: 656 VGRGSRFLKRWMDFLQEQ 673
>gi|378730540|gb|EHY56999.1| senataxin [Exophiala dermatitidis NIH/UT8656]
Length = 2264
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 257/528 (48%), Gaps = 106/528 (20%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------------YQLVKQT 547
++N++Q AVK A+ +LIQGPPG+GKT T +V +L T
Sbjct: 1298 EVNKAQAKAVKSALDNDAFTLIQGPPGSGKTKTICALVGAMMTGFIKNSDGKGVRLNAAT 1357
Query: 548 GSP---------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSP 589
G P +LVCAPSN AVD+L ++ L VVR+ +AI++
Sbjct: 1358 GRPSPAPRASKKILVCAPSNAAVDELVMRLKLGVTTLDGQFEKLSVVRLG--RTDAINAG 1415
Query: 590 VSFLALHNQIRNMEMNSELKK---------LLQLKEETGEL------------------- 621
V + L ++ N ++N K +++ K + EL
Sbjct: 1416 VKDVTLE-ELVNAKLNVAAPKDPREDIHSVMMEHKAVSEELNALRDRITEQRGKGIPVPT 1474
Query: 622 -----------------SSADEKRYR---------MLKKNAEKSLLDNADVICCTCVGAG 655
S DE R R + +K ++ +LD+A V+C T G+G
Sbjct: 1475 ADEQLMDALKRKKNGLGSKIDEMRERQNTASRDMELSRKRIQQEILDSAHVLCATLSGSG 1534
Query: 656 DP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
+ L ++F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ ++AA+
Sbjct: 1535 HEIFQSLNVEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSREAAKFQ 1594
Query: 714 LSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ + L+ QYRMHP +S FPS FY+ L++G AD KL + P
Sbjct: 1595 YEQSLFARMENNHKKDVHLLDTQYRMHPAISLFPSKTFYDSRLKDG--ADMAKLRR--RP 1650
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVI 827
W D P F+ QG + A G S VN E + ++ R ++ K + +IGVI
Sbjct: 1651 WHQSDLFAPYRFFDVQGMSQAAPKGHSLVNIAELNVAMQLYDRLVKDVPKYDFAGKIGVI 1710
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L +++ I +IE + DAFQGRE ++II SCVR++ H GIGFL
Sbjct: 1711 TPYKGQLKEL--KLRFTQRYGQDITSKIEFNTTDAFQGRESEIIIFSCVRASTH-GIGFL 1767
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
ND RR+NV LTRAK + V+GN + L + W L+N K + V G
Sbjct: 1768 NDIRRMNVGLTRAKSSLWVLGNSQSLMQGEYWRALVNDAKARNVYTHG 1815
>gi|156061925|ref|XP_001596885.1| hypothetical protein SS1G_03108 [Sclerotinia sclerotiorum 1980]
gi|154700509|gb|EDO00248.1| hypothetical protein SS1G_03108 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 702
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 243/463 (52%), Gaps = 64/463 (13%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ +A++ A+ + ++LI GPPGTGKT T ++ Q++KQ G VLVC PSNI+VD
Sbjct: 224 LNDSQKHAIRFALASKEIALIHGPPGTGKTHTLIELILQMLKQ-GLRVLVCGPSNISVDN 282
Query: 564 LTEKIHRTGLKVVRVCAKSR---EAIDSPVSFL-------ALHNQIRNMEMNSE---LKK 610
+ E++ + ++R+ +R ++ + L A+ +R EM+++ +KK
Sbjct: 283 IVERLAPHKVPILRLGHPARLLPSVVNHSLDVLTQTSEAAAIVQDVRK-EMDTKQASIKK 341
Query: 611 LLQLKEETGELSSADE--KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
+E E K +R ++ +L+ + V+ T GAG +L F ++
Sbjct: 342 TKSGRERKAIYGDLKELRKEFRERERKCVNTLVKGSKVVLATLHGAGGYQLRDENFDVVI 401
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR---------------AG 713
IDE+ QA E +C VP +L A +++L GDH QL P + +
Sbjct: 402 IDEASQALEAQCWVP-LLSAGKVVLAGDHLQLPPTIKSLNSKTKTNPQSTETESIIKGMT 460
Query: 714 LSQSLFERLVVL-GIR-PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
L +LF+RL+ L GIR L QYRMH ++ +FPS+ YE L R L+ +
Sbjct: 461 LETTLFDRLLKLHGIRIKVMLTTQYRMHDKIMRFPSDELYESKLVAAEAVKARLLT--EL 518
Query: 772 PWPVPD-----KPMLFYVTQG-------QEE----IAGSGT---SYVNRTEASNVEKITT 812
P+ V + +P++F+ TQG +EE AG G S N EA+ V +
Sbjct: 519 PYDVEETEDTIEPLIFFDTQGGDFPEKSEEEGVDKKAGKGMLGESKSNEMEAALVRRHVQ 578
Query: 813 RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
+ G+KPE I V+TPY Q A + + M+ +++ IE+ SVD FQGREK+ II
Sbjct: 579 NLVDAGLKPEDIAVVTPYNAQLALMARSMK-------QVFPGIELGSVDGFQGREKEAII 631
Query: 873 MSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
+S VRSN +GFL + RRLNVA+TR + + VIG+ + +S+
Sbjct: 632 VSLVRSNSEYEVGFLGEKRRLNVAMTRPRRSLTVIGDSETVSR 674
>gi|218128722|ref|ZP_03457526.1| hypothetical protein BACEGG_00293 [Bacteroides eggerthii DSM 20697]
gi|217989177|gb|EEC55492.1| putative DNA helicase [Bacteroides eggerthii DSM 20697]
Length = 636
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 245/469 (52%), Gaps = 43/469 (9%)
Query: 486 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLV 544
+V FR P F P LN +Q AV + R ++++ GPPGTGKT T +Y+ +
Sbjct: 180 KVGFRELYPVRF-----PWLNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETL 234
Query: 545 KQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM 604
+ VLVCA SN+AVD ++EK+ G+ V+R+ +R D +SF + N +
Sbjct: 235 HRE-PQVLVCAQSNMAVDWISEKLVDRGVNVLRIGNPTR-VNDKMLSF-TYERRFENHPL 291
Query: 605 NSEL----KKLLQL--KEETGELSSADEKRYRM---------LKKNAEKSLLDNADVICC 649
EL K+L QL + G + R RM L+ L D+A VI
Sbjct: 292 YPELWSIRKELRQLGGRARRGSYDEREGIRSRMSRLRDRATALEVQINTELFDSAHVIAS 351
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
T V + L +F ++ IDE+ QA E C + I A +++L GDHCQL P + C +A
Sbjct: 352 TLVSSNHRLLNGRRFGTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCYEA 410
Query: 710 ARAGLSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
AR GL ++L E+ V +P L+VQYRMH ++ +F SN+FY+G L+ R +
Sbjct: 411 ARGGLERTLMEK--VAANKPSAVSLLKVQYRMHEDIMRFSSNWFYDGELEAAPEIRHRGI 468
Query: 767 SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK-ITTRFIRCG---MKPE 822
D P D + + +EE G +N+ EA + K + +R G + E
Sbjct: 469 LDWDTPVTWIDTSDMDF----KEEFVGETFGRINKEEAHLLLKELEAYILRIGGSRILEE 524
Query: 823 QI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSN 879
+I G+I+PY+ Q +L + +GS + Y+ I V +VD FQG+E+D+I +S VR+N
Sbjct: 525 RIDFGLISPYKAQVQYL--RGKIKGSATLRPYRSLITVNTVDGFQGQERDVIFISLVRAN 582
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
+ IGFLND RR+NVA+TRA+ ++++G L + LL + K+
Sbjct: 583 EEGQIGFLNDLRRMNVAITRARMKLVILGEAATLGHHAFYKQLLEYVKK 631
>gi|317504722|ref|ZP_07962683.1| DNA helicase [Prevotella salivae DSM 15606]
gi|315664160|gb|EFV03866.1| DNA helicase [Prevotella salivae DSM 15606]
Length = 649
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 246/454 (54%), Gaps = 42/454 (9%)
Query: 497 FSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQ-LVKQTGSPVLVC 554
F + P LN +Q AV + + ++++ GPPGTGKT T + + L+K+ S VLVC
Sbjct: 199 FESQRFPWLNPTQERAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMKE--SQVLVC 256
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQL 614
A SN+A+D ++E++ G+ V+RV +R D + F R E + + +L +
Sbjct: 257 AQSNMALDWISEQLVDRGINVLRVGNPTR-VNDKMLGF----TYERRFESHPDYPQLWAI 311
Query: 615 KEETGELSS----ADEK---RYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLL 660
++ EL S DE+ ++ LK A + +L D A V+ T VG+ + L
Sbjct: 312 RKAIRELRSHRKRGDERFHQKFEHLKARATELEIRINSNLFDEARVVASTLVGSANRVLE 371
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
+KF ++ IDE+ QA E C +P + +++L GDHCQL P+V A +AGL +SL E
Sbjct: 372 GMKFGTLFIDEAAQALEAACWIP-MRRVTRVVLAGDHCQLPPMVKSIAALKAGLGKSLME 430
Query: 721 RLV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
R+V V+ + L++QYRM+ ++ KF S++FY G +++ R + +D P
Sbjct: 431 RIVEHKPDVVTL----LKIQYRMNEKIMKFSSDWFYHGEVESAPQTRNRGILDLDEPIEW 486
Query: 776 PDKPMLFYVTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--GVITP 829
D + E G +N+ EA ++ + F + G + E I GVI+P
Sbjct: 487 RDSKVDDEEGDSGESFVGESFGRINKAEAQLTLDTLEDYFKKIGKQRILDEHIDVGVISP 546
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Y Q +L + ++ + S K Y+ I V +VD FQG+E+D+I++S VRSND IGFLN
Sbjct: 547 YRAQVQYLRRLIRKRESF--KPYRHSISVNTVDGFQGQERDIILISLVRSNDQGQIGFLN 604
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
D RR+NVA+TRA+ +I++G+ L + P + L
Sbjct: 605 DLRRMNVAITRARMKLIILGDKATLCRHPFYRKL 638
>gi|291228829|ref|XP_002734380.1| PREDICTED: regulator of nonsense transcripts 1-like [Saccoglossus
kowalevskii]
Length = 2720
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 162/492 (32%), Positives = 238/492 (48%), Gaps = 68/492 (13%)
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV-------KQTGSPVLVC 554
LP LN Q +A+K +++ +++QGPPGTGK+ +A + V G +L C
Sbjct: 2230 LPSLNEDQFHAIKMSLENKFTVVQGPPGTGKSYMAANLANAFVLSNRDEPSMKGGRILYC 2289
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL--------------------- 593
APSN AVD + + R + ++R+ +KS E D PV L
Sbjct: 2290 APSNKAVDVAADYLTRFDMNIIRMYSKSMEGKDYPVPGLTDITQYKRGNNAESSPALDDI 2349
Query: 594 ALHNQIRNM--EMNSELKKL-LQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCT 650
ALH IR + +E+++ + + S D + Y+ L K AEK L DVI CT
Sbjct: 2350 ALHRVIRKAPSKYGNEIRQFDSRFRNAAIPSSKKDIEDYKALIKKAEKDALIGCDVILCT 2409
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI-LGAKQLILVGDHCQLGPVVMCKKA 709
C A RL K+ +IDE+ TEPE +VP++ +Q++L+GDH QL P+V +
Sbjct: 2410 CSEAASKRLDKLCILQCIIDEAGMCTEPETLVPLVRANPEQVVLIGDHRQLQPIVTHNLS 2469
Query: 710 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK- 768
+ GL SL ER RL++QYRMH + +FP+N FY+G L+ +R K
Sbjct: 2470 NQMGLGVSLLERYCDQN-HFIRLKIQYRMHNAICEFPNNQFYDGDLETAETVLKRSQLKT 2528
Query: 769 -IDFPWPVPDK-PMLFYVTQGQEEI------AGSGTSYVNRTEASNVEKI----TTRFIR 816
+D WP P +F + G+EE GS S N E +V +I TT++
Sbjct: 2529 TMDGVWPGGKHVPTVFCHSVGKEESLKVTTDEGSEHSKKNLQEVKDVVRIAKILTTKY-- 2586
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCV 876
G+ +I +++ Y Q + G L Q I V SV FQG E+D II+S V
Sbjct: 2587 -GLAKSRIQILSQYRA------QCHEITGELKGVNCQNIGVNSVIGFQGSEQDYIILSTV 2639
Query: 877 RSNDHQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
RS + I GF+ D ++NVALTRA+ G+I+IGN +L W LL
Sbjct: 2640 RSLPQREIEERPTKGWLKKNLGFVTDEHQINVALTRARKGLIIIGNANLLRTDYNWRRLL 2699
Query: 924 NFYKEQKVLVEG 935
Y+ + V+
Sbjct: 2700 EEYRRKNCCVDA 2711
>gi|237720100|ref|ZP_04550581.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229450652|gb|EEO56443.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 649
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 171/530 (32%), Positives = 256/530 (48%), Gaps = 57/530 (10%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 143 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 200
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 201 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 255
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 256 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 314
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 315 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 364
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 365 IASTLVSSNHRLLNGRRFSTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 423
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+AAR GL +L E++V L L +VQYRMH + +FPS++FY G L+ R
Sbjct: 424 IEAARGGLDHTLMEKVVQLKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRG 483
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKP 821
+ D P D + + E+ G +N+ EA+ +E R + +
Sbjct: 484 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELEAYIERIGKERILD 539
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN 879
E+I G+I+PY+ Q +L ++ S I V +VD FQG+E+D+I +S VR+N
Sbjct: 540 ERIDFGLISPYKAQVQYLRGKIK-GNSFLRPFRSLITVNTVDGFQGQERDVIFISLVRAN 598
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 599 EDGQIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKE 648
>gi|357137188|ref|XP_003570183.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 975
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 176/567 (31%), Positives = 270/567 (47%), Gaps = 77/567 (13%)
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAV 466
G + + L+S G PT FS F KS DR+Q + L++ +
Sbjct: 399 GCSITVALESRHGDPT-----FSRLF-GKSVRIDRIQGLADALTYERNLEALMLLQRNGL 452
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK----HAI----- 517
+ S + L G + D + + + +LPDL S+ YA AI
Sbjct: 453 QKSNASISVVATLFGDSKDMMKMEQNCLTDWGELSLPDLRLSERYAFDASQLRAISLGLN 512
Query: 518 -QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV 576
+RP+ +IQGPPGTGKTV A ++ + V+Q G VLV APSN AVD + E++ TGL +V
Sbjct: 513 KKRPVLVIQGPPGTGKTVLLAELIVRAVRQ-GENVLVTAPSNAAVDNMVERLSSTGLNIV 571
Query: 577 RVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL----LQLKE------ETGELSSADE 626
RV +R + LA +I N + +K+L L+E E L++
Sbjct: 572 RVGNPARISPSVASKSLA---EIVNGRLGQFMKELERKRTNLREDLRDCIEDDSLAAGIR 628
Query: 627 KRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEP 678
+ + L ++ EK +L +A V+ T GA DP + K F ++IDE+ QA EP
Sbjct: 629 QLLKQLGRDMEKKEKETIMEVLSDAQVVLSTNTGAADPHIRKAGCFDLVIIDEAGQAIEP 688
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQY 736
C +P++ G K+ IL GDHCQL P ++ +KA GL +S+ ER L G+ RL VQ+
Sbjct: 689 SCWIPILQG-KRCILAGDHCQLAPAILSRKALEGGLGKSMMERASSLHDGLLNSRLMVQH 747
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSK---IDFPWPVPDKPMLFYVTQGQEEI-- 791
RMH ++ + S Y G L++ L+ + W + P+L T+ I
Sbjct: 748 RMHDSIASWASKEMYHGLLKSSHSVSSHLLADSPVVKATW-ITRCPLLLLDTRMPYGILN 806
Query: 792 ---------AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
AG+G S+ N EA V + + CG+ P I V +PY Q L + +
Sbjct: 807 IDCVEHLDPAGTG-SFYNDGEADIVTQHVLNLVHCGVSPSAIAVQSPYIAQVQLLREKFE 865
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
L +E +++D+FQGRE D +++S VRSN +GF+ D R +NVA+TRA+
Sbjct: 866 EYPGLSG-----VEASTIDSFQGREADAVVISMVRSNPLGAVGFMGDSRLMNVAITRARR 920
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+ V+ + + LL +
Sbjct: 921 HVTVVCDTSTICHSTFLARLLRHIRRH 947
>gi|255729912|ref|XP_002549881.1| hypothetical protein CTRG_04178 [Candida tropicalis MYA-3404]
gi|240132950|gb|EER32507.1| hypothetical protein CTRG_04178 [Candida tropicalis MYA-3404]
Length = 705
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 263/504 (52%), Gaps = 64/504 (12%)
Query: 451 STSFDRMQLALRKF-AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP----DL 505
S ++ RM +++ K A++D++ I+ LLG + ++PK S L L
Sbjct: 189 SITYKRMLMSMDKVNALEDKN---DIHRILLGES-------KYIPKPTSNLKLEFINDRL 238
Query: 506 NRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
N SQ A+ AI + +++I GPPGTGKT T ++ QL G VLVC PSNI+VD +
Sbjct: 239 NDSQKEAIDFAINKSNITIIHGPPGTGKTYTLIELIQQLTNNLGEKVLVCGPSNISVDTI 298
Query: 565 TEKIH---RTGLKVVRVCAKSREAIDSPVSFLAL------HNQIRNMEMN-----SELKK 610
E++H + K++R+ +R + L + H+ I+++E + S++KK
Sbjct: 299 LERLHDKYKKPEKLIRMGHPARLLPGNLAHSLEILSKSYGHDVIKDIEKDIQSTLSQIKK 358
Query: 611 LLQLKEETGELSSAD--EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
+ E K + +K LL + V+ T GAG L + F +I+
Sbjct: 359 CKRYAERKALYQELKLLRKELKQREKKIVAELLQQSQVVISTLHGAGSFDLKGVSFDTII 418
Query: 669 IDESMQATEPECMVPVILGA--KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-L 725
IDE Q+ EP+C +P++L + K+L++ GD+ QL P + CKK + L +LF+RLV
Sbjct: 419 IDEVSQSLEPQCWIPLLLTSNFKRLVIAGDNMQLPPTIKCKKN-ESFLGTTLFDRLVKQC 477
Query: 726 GIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK-LSKIDFPW----PVPDK 778
FR L VQYRM+ + +FPS Y+ L +C K +S +D P
Sbjct: 478 DGDSFRKLLNVQYRMNQSIMEFPSMQLYDNKL---LCDSSVKDISLLDLPGVEDNETTSA 534
Query: 779 PMLFYVTQG-------QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
++Y TQG E I G + Y N E V+ + + G++P+ IG+I+PY
Sbjct: 535 KCIWYDTQGGEFPEQINESIEGGDSKY-NEMEILVVQGHLQKLLDSGVRPQDIGIISPYA 593
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
Q L K+ E+EV +VD FQGREK++II+S VRSND + IGFL++ R
Sbjct: 594 AQVQLL----------KKKVVPEVEVHTVDGFQGREKEVIILSLVRSNDDREIGFLSEQR 643
Query: 892 RLNVALTRAKYGIIVIGNPKVLSK 915
RLNVA+TR K + ++G+ ++L++
Sbjct: 644 RLNVAITRPKRHLCIVGDLELLNQ 667
>gi|417303798|ref|ZP_12090840.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
gi|327539896|gb|EGF26498.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
Length = 735
Score = 220 bits (561), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 242/460 (52%), Gaps = 54/460 (11%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN Q AV A+ +++I GPPGTGKT T A I+ Q V++ G VL CA SN AVD
Sbjct: 282 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVER-GERVLACAASNTAVD 340
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNMEMNSELKKLLQ-- 613
L E++ R V+RV +R +D+ V I++ + EL ++L+
Sbjct: 341 NLLERLVRLMPNVIRVGHPARVFESLQEHTLDALVESDPTSTVIKD--LRRELDQILREA 398
Query: 614 ---LKEETGELSSA------DEKRYRMLKKNAEKSL----LDNADVICCTCVGAGDPRLL 660
++E G + R R + ++ E+S+ +D ADVIC T D LL
Sbjct: 399 NRPIREGGGRERKQRAELFNEAGRLRGMIRSQERSIVRAVIDRADVICTTTT--IDEELL 456
Query: 661 KIK-FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ F +++DES Q TEP M IL A +LIL GDHCQL P V+ AAR G+ SL
Sbjct: 457 SDQSFDLVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLM 515
Query: 720 ERLV-VLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSL------QNGVCADERKLSKIDF 771
+RLV G + + RL VQYRM+ + +F S+ FY+G+L + + D + + DF
Sbjct: 516 QRLVHRYGEKIYRRLTVQYRMNESIMRFSSDHFYDGTLIADASVKRHLLCDLPNVEENDF 575
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVIT 828
+P+L T G +EE+ G S +N EA + ++ + G+ +QI VI
Sbjct: 576 ----TSEPLLLIDTAGAGYEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAVIA 631
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY Q L + G IE+ +VD FQGREK++++++ RSN IGFL+
Sbjct: 632 PYAAQVRNLRMRLDLDG---------IEIDTVDGFQGREKEVVLITMTRSNPDGEIGFLS 682
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D RR NVALTRAK +IV+G+ L ++ L +++++
Sbjct: 683 DQRRSNVALTRAKRKLIVVGDSATLCNHEFYSELFSYFED 722
>gi|427385832|ref|ZP_18882139.1| hypothetical protein HMPREF9447_03172 [Bacteroides oleiciplenus YIT
12058]
gi|425726871|gb|EKU89734.1| hypothetical protein HMPREF9447_03172 [Bacteroides oleiciplenus YIT
12058]
Length = 629
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 174/556 (31%), Positives = 267/556 (48%), Gaps = 45/556 (8%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTE--ATTGFSVDFIWKSTSFD 455
R S D T+ + D V + SAGA E +T V + TS+
Sbjct: 90 FRQSVDGKITYMNFTGTVSYADEARMVVAM---PSAGAILEVQSTDNLGVQLYFDETSYR 146
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
M AL + A + +LG + FR P F P LN +Q AV
Sbjct: 147 TMFEALSDVIHAKGNRLAELRDTMLG--TLKPAFRELYPVRF-----PWLNSTQETAVNK 199
Query: 516 AI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+ R +S++ GPPGTGKT T +Y+ + + VLVCA SN AVD ++EK+ G+
Sbjct: 200 VLCSRDVSIVHGPPGTGKTTTLVEAIYETLHRE-PQVLVCAQSNTAVDWISEKLVDRGVN 258
Query: 575 VVRVCAKSR-----------EAIDSPVSFLALHNQIRNM-EMNSELKKLLQLKEETGELS 622
V+R+ +R +S S+ L + M EMN + + +E
Sbjct: 259 VLRIGNPTRVNDKMLSFTYERRFESHPSYTELWGIRKAMREMNGRRRGSYEERESARNRL 318
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
S R L+ L D+A VI T V + L +F ++ IDE+ QA E C +
Sbjct: 319 SRLRDRATQLEIQINADLFDSAHVIASTLVSSNHRVLNGRRFGTLFIDEAAQALEAACWI 378
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF---RLEVQYRMH 739
I A +++L GDHCQL + C +AARAGL +L ER+V +P L++QYRM+
Sbjct: 379 -AIRKADRIVLAGDHCQLPATIKCYEAARAGLEHTLMERIVT--TKPTVVSLLKIQYRMN 435
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV 799
+ FPS +FY+G L+ R + D P D + + +EE G +
Sbjct: 436 EAIMHFPSQWFYDGQLEAAPEIRHRGILDWDTPITWIDTSEMEF----KEEFVGETFGRI 491
Query: 800 NRTEASNVEKITTRFI-RCG---MKPEQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
NR EA + K +I R G + E+I G+I+PY+ Q +L ++ +L + Y+
Sbjct: 492 NREEAHLLLKELEAYIQRIGGHRILDERIDFGIISPYKAQVQYLRNKIKTSAAL--RPYR 549
Query: 854 EI-EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
+ V +VD FQG+E+D++ +S VR+N+ IGFLND RR+NVA+TRA+ ++++G
Sbjct: 550 SLLTVNTVDGFQGQERDVVFISLVRANEEGQIGFLNDLRRMNVAITRARMKLVILGEANT 609
Query: 913 LSKQPLWNNLLNFYKE 928
L ++ L+ + E
Sbjct: 610 LKHHKFYHKLIEYINE 625
>gi|85001273|ref|XP_955355.1| regulator of nonsense transcripts-related protein [Theileria annulata
strain Ankara]
gi|65303501|emb|CAI75879.1| regulator of nonsense transcripts-related protein, putative
[Theileria annulata]
Length = 1189
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 229/455 (50%), Gaps = 56/455 (12%)
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQLTEK 567
Q A A++ PL+LIQGPPGTGKT + I+ K + +L A SNIA D L +
Sbjct: 706 QYTATISALKNPLTLIQGPPGTGKTHVACAIIDCWAKLNPNIRILAVADSNIAADNLIDA 765
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEK 627
+ + ++ +R+ S + I+N++ + L+LK K
Sbjct: 766 LTKKNIQALRIGQSSEYELQ--------EESIKNLD---RYQTYLKLK------MGGHYK 808
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
+ LK + ++I TCVG+G+ L +F ++IDE Q+ E ++P+ G
Sbjct: 809 EAKNLKVLLYSEAIKQHNIIIATCVGSGNDLLSNYQFSHVIIDECSQSIEMSNLIPIGKG 868
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFP 746
K L+L+GDH QL P ++ A + GL +SL ERL+ + P L VQ RMHP + +FP
Sbjct: 869 CKSLVLIGDHKQLRPTIISNYALKLGLDKSLLERLIQEEVAPVHMLNVQRRMHPSIIEFP 928
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY------------VTQGQEEIAGS 794
+ FY + N D + F WPVP ++F + QG+ +I
Sbjct: 929 NMHFYANKIFNQDVNDINRSMIRGFKWPVPFYNLVFIDVSTPSPNTQFEIPQGKSKINMI 988
Query: 795 GT-----SYVNR----------TEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLV 838
+Y+ +E V + F++ +K +QIG++TPY+ Q+ +
Sbjct: 989 LIIYIIFNYLQNYLIIYNKKIFSEIKCVIALLNSFLKSNDVKEQQIGILTPYDAQKLMIK 1048
Query: 839 QHMQYQGSLPAKIYQE--IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
+H++ P K Q IEV SVD FQGREKDLII S VRSN + IGFL DPRR+NV
Sbjct: 1049 KHLK-----PLKEVQSHLIEVDSVDGFQGREKDLIIFSAVRSNMVKDIGFLRDPRRMNVM 1103
Query: 897 LTRAKYGIIVIGNPKVL-SKQPLWNNLLNF-YKEQ 929
LTRA+ G++V+G+ L S + W LN+ Y +Q
Sbjct: 1104 LTRARRGLVVLGDSHTLMSDRENWRPYLNWIYSKQ 1138
>gi|406605000|emb|CCH43533.1| hypothetical protein BN7_3085 [Wickerhamomyces ciferrii]
Length = 2034
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 269/519 (51%), Gaps = 101/519 (19%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQL---------VKQTGS----- 549
+NRSQ A+ +I+ + L+QGPPGTGKT T I+ + V QT S
Sbjct: 1272 VNRSQANAIASSIKAQGFFLVQGPPGTGKTKTILGIISHMLSNYRANSNVIQTPSVIPGK 1331
Query: 550 --------PVLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVS 591
VL+CAPSN AVD+L ++ + G+ ++VR+ +AI++ V
Sbjct: 1332 TLADFKNKKVLICAPSNAAVDELVLRL-KDGIPNAKGEIYNPQLVRLGRS--DAINTAVK 1388
Query: 592 FLALHNQI-----RNMEMNSE-----LKKLLQLKEE-------------------TGEL- 621
+ L + +N S+ LK+L ++K E GE+
Sbjct: 1389 DMTLEELVDAKLGKNTATKSDTIPALLKELSEVKHELEKKRAILAAGNNKNEEKVRGEIR 1448
Query: 622 ----------SSADEKR---------YRMLKKNAEKSLLDNADVICCTCVGAGDPRL--L 660
DE+R + ++N + +L+ A++IC T GA + +
Sbjct: 1449 DNKLKQNKIKKQLDEEREAQTSSNRTREVNRRNIQAQILNEAEIICSTLSGAAHDMVANI 1508
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
IKF S++IDE+ Q TE ++P+ G ++ I+VGD QL P V+ AA + QSLF
Sbjct: 1509 GIKFDSVVIDEACQCTELSAIIPLRYGCQRCIMVGDPNQLPPTVLSSVAAESKYDQSLFV 1568
Query: 721 RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
R+ +P L+VQYRMH ++SKFPS FY+G LQ+G D L+K ++ V P
Sbjct: 1569 RMTSHS-KPLLLDVQYRMHSDISKFPSKKFYDGHLQDGPSMD--VLTKREWHKNVSFPPY 1625
Query: 781 LFY-VTQGQEEIAGSGTSYVNRTEASN----VEKITTRFIRCGMKPEQIGVITPYEGQ-R 834
FY + +G+E SYVN+ E ++ + T+F R + +IGVITPY+ Q R
Sbjct: 1626 RFYDIAEGKESQNSKTFSYVNKMEIKIAIELIDTLYTKFGRIDYR-NKIGVITPYKEQNR 1684
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIGFLNDPRRL 893
A +++ G+ +I +I ++D FQG+EK++IIMSCVR++ ++ G+GFL D RR+
Sbjct: 1685 AIQQAFIRHFGN---QIRGDITFNTIDGFQGQEKEIIIMSCVRADSNKSGVGFLKDFRRM 1741
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
NVALTR+K + ++G+ L K LW++L+ K++ +
Sbjct: 1742 NVALTRSKCSLWILGHNNSLVKNDLWSDLITDAKDRNMF 1780
>gi|350637189|gb|EHA25547.1| hypothetical protein ASPNIDRAFT_42089 [Aspergillus niger ATCC 1015]
Length = 2051
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 254/528 (48%), Gaps = 105/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQ---------------- 546
++N +Q A+K A+ +LIQGPPG+GKT T +V L+
Sbjct: 1287 NVNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGNQGVAISRPMGNA 1346
Query: 547 --------TGSPVLVCAPSNIAVDQLTEK-------IHRTGLKVVRVCAKSREAIDSPVS 591
T +LVCAPSN AVD+L + IH K+ + +AI++ V
Sbjct: 1347 KPAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKLSVIRLGRSDAINTNVL 1406
Query: 592 FLALHNQIRNMEMNSELKK----------------------------------------- 610
+ L +++ N +N +K
Sbjct: 1407 DVTL-DELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKETRARMDQCRAQGLPVPAE 1465
Query: 611 ------LLQLKEE--TGELSSADEKRY------RMLKKNAEKSLLDNADVICCTCVGAGD 656
LL+ K+ + E+ SA +K + + ++ ++ ++D A VIC T G+G
Sbjct: 1466 LEREFDLLKKKKTQLSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGH 1525
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A++
Sbjct: 1526 EMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQY 1585
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
QSLF R+ R L++QYRMHPE+S FPS+ FY+G LQ+G + ++ PW
Sbjct: 1586 EQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVR----PW 1641
Query: 774 PVPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIGVI 827
+ P F+ QG + A G S +N R E++ T F R +IG+I
Sbjct: 1642 HQSELLSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDF-RAFNFDRKIGII 1700
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L Q+ +I+ +I+ + DAFQGRE ++II SCVR+++ +GIGFL
Sbjct: 1701 TPYKGQLREL--KTQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASN-KGIGFL 1757
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
D RR+NV LTRAK + V+GN + L + WN L+ + + V +G
Sbjct: 1758 ADIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRNVYTDG 1805
>gi|393235485|gb|EJD43040.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 887
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 242/477 (50%), Gaps = 50/477 (10%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK--QTGSPVLVCAPS 557
P LP LN +QV A+ + +SL+QGPPGTGKT T + L + P+LVC +
Sbjct: 414 PELP-LNSTQVRAIALMLASRVSLVQGPPGTGKTKTIVETIRLLKRHFHVPYPILVCTYT 472
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKS-----------REAIDSPVSFLALHNQIRNME-MN 605
NIAVD L E + + GL+ +R + R D+ V L + +E +N
Sbjct: 473 NIAVDNLVEGLGKAGLRPLRFGSSGTAPAGGAQYTLRARRDAHVLGPHLDKLLGRIERLN 532
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPR 658
+L+ L + + EK L+ K +++++DV+C TC+ AG
Sbjct: 533 RDLRGLRAAEPPNPAAIARREKEVLGLRGAVFKLERLLMQEIVEDSDVVCTTCISAGSAA 592
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
L F + +DE+ +TEP ++P++ G + + L+GDH QL PV+ +A R GL +SL
Sbjct: 593 LHVADFPIVFLDEASMSTEPASLIPLMRGCEHVALIGDHKQLPPVITSDEAERGGLGRSL 652
Query: 719 FERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
FERL G P L+VQYRMHP+LS+FP++ FY SL +G + +++ P
Sbjct: 653 FERLTEEGEVPSIMLDVQYRMHPDLSRFPASEFYGRSLLDGTVSAHGEVA------PALR 706
Query: 778 KPMLFYVTQGQEEI--------AGSGTSYVNRTEASNVEKITTRFI--RCGMKPEQIGVI 827
P ++ +G + A S VN EA V + + + +IGVI
Sbjct: 707 PPASRFLQRGAGVVFLDHRHGEARRDRSRVNVGEARLVCDVVEDLLLQNEDLVGREIGVI 766
Query: 828 TPYEGQRAFLVQHM-----QYQGSLP----AKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
PY Q + L + + ++ +L A + IEV +VD F+GREK++II S VR+
Sbjct: 767 APYAAQISLLERVLGENRERWVDALGSERRADEVEAIEVKTVDGFEGREKEVIIFSTVRN 826
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS--KQPLWNNLLNFYKEQKVLV 933
N IGFL D RRLNV LTRAK G+ V G+ + L K +W + + + + ++V
Sbjct: 827 NGAGQIGFLADRRRLNVGLTRAKRGLFVAGSVRTLGTEKSGVWARYVEYLRARSLVV 883
>gi|402220492|gb|EJU00563.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 868
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 232/471 (49%), Gaps = 67/471 (14%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVT--SATIVYQLVKQTGSPVLVCAPSNIAV 561
DLN +Q AV + + LSL+QGPPGTGKT T A + +L + P+LV +N+AV
Sbjct: 350 DLNETQTRAVALMLSKRLSLVQGPPGTGKTKTIIEAARLLKLHFEVPQPLLVATYTNVAV 409
Query: 562 DQLTEKIHRTGLKVVRVCAKS--------REAIDSPVSFLALHNQIRNMEMNSELKKLLQ 613
D L + GL+ +RV + + ++ ++ L ++ +E + KL
Sbjct: 410 DNLVAGLAAAGLRPLRVGGEEYSQQPKLDKHRLEVKIAAHPLQKEVEKLE--KAIDKLSD 467
Query: 614 LKEETGELS--SADEKRYRMLKKNAEKSLL------------------DNADVICCTCVG 653
+ E + + S +E+R K ++ LL ADV+C TC+
Sbjct: 468 RRREAIDAAKPSKNEERIERAKNTHKEHLLRLKMKKFAIRNAMIHDIVSKADVVCTTCLT 527
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
+ + L I F + +DE+ +TEP ++P++ G++ + L+GDH QL P++ +A G
Sbjct: 528 SANTALNVIDFPVVFLDEASMSTEPASLIPLMKGSRHVALIGDHKQLPPIITSAEAQAGG 587
Query: 714 LSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
LS+SLFERL G P L++QYRMHP +S+FPS FY +L++G K+ P
Sbjct: 588 LSKSLFERLTEEGDTPSIMLDMQYRMHPSISRFPSAQFYNKTLRDGTVDHAGKVR----P 643
Query: 773 WPVPDKPMLF---YVTQGQEEI----------AGSGT----SYVNRTEASNVEKITTRFI 815
P K L V++ Q E AGS S +N EA V I +
Sbjct: 644 SLAPPKSTLLDDESVSELQTEKERLSVVFVDHAGSEAKKDRSRINAGEAQMVCSIVEELL 703
Query: 816 RC--GMKPEQIGVITPYEGQRAF---LVQHMQYQGSLPAKIYQE--------IEVASVDA 862
C M + IG+I PY Q L++H Q Q E IEV +VD
Sbjct: 704 YCNPSMTGDDIGIIAPYVAQIRLLDRLLKHDQEQAERFKSTLGEHRGLQMSNIEVKTVDG 763
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
F+GREK++II S VR+N IGFL D RRLNV LTRA+ + V+GN L
Sbjct: 764 FEGREKEVIIFSTVRNNPQGAIGFLADGRRLNVGLTRARRALFVLGNAGTL 814
>gi|375146785|ref|YP_005009226.1| ATPase AAA [Niastella koreensis GR20-10]
gi|361060831|gb|AEV99822.1| ATPase AAA [Niastella koreensis GR20-10]
Length = 633
Score = 220 bits (560), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 166/542 (30%), Positives = 276/542 (50%), Gaps = 54/542 (9%)
Query: 422 GDEVGLELKSSAGAPTEATTG-FSVDFIWKSTSFDRMQLALRKFA-VDDQSVSAYIYHRL 479
G+ + + L++ P A+ G +D ++ S+D MQ A + A + ++ + L
Sbjct: 101 GNRLKITLRTDE-LPDWASDGKLGIDLLFDENSYDEMQNACKLAASLAEKPAEGRLIQIL 159
Query: 480 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSAT 538
G+ F P S +LN SQ AV +Q L+++ GPPGTGKT T
Sbjct: 160 TGNKAPS--FENSAPVAVS-----NLNSSQQAAVNKILQANDLAIVHGPPGTGKTTTLVQ 212
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
+ ++K+ +LV APSN AVD L+EK+ GL V+RV +R + + L L +
Sbjct: 213 AIKAMIKKDNQQILVVAPSNTAVDLLSEKLSDEGLNVLRVGNPAR--VSERLLSLTLDYK 270
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSL----------LDN----- 643
+ + E+K+L + +++ ++ + +++ K+L +DN
Sbjct: 271 MADHPHTKEIKRLKKQASAFMDMAHKYKRHFGKAERDQRKALFAEARNIMKEVDNSEQYI 330
Query: 644 -------ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGD 696
A VI T +G+ + +KF++++IDE+ QA EP C VP IL A++++L GD
Sbjct: 331 IKDLVAKAQVITATLLGSNHYTVRNLKFNTVVIDEAGQALEPACWVP-ILKAQKVVLAGD 389
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSL 755
HCQL P V +AA+ GL+ +L E+ V L LE QYRMH + + S+ FY+ L
Sbjct: 390 HCQLPPTVKSAEAAQNGLATTLLEKCVALHPEAEVLLEEQYRMHEMIMGYSSSTFYDDRL 449
Query: 756 QNGVCADERKLSKIDFPWPVPDKPMLFYVTQG-QEEIAGSGTSYVNRTEASNVEKITTRF 814
+ L D P++F T G + TS N EA+ + + T+
Sbjct: 450 KAHASVARHVLFS-------NDNPLVFVDTAGCGFDEKTEQTSTYNPEEAAFLFRHLTQL 502
Query: 815 IRC---GMKPEQ---IGVITPYEGQRAFLVQHMQYQGSLPAKIY-QEIEVASVDAFQGRE 867
+ KPE I +I+PY+ Q L Q Q+ S + Y +I + ++D+FQG+E
Sbjct: 503 VSSLDSHYKPENFPSIAIISPYKQQIDTLKQ--QFLSSPALQAYGHKIAINTIDSFQGQE 560
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+D++ +S RSN IGFL+D RR+NVA+TRA+ ++VIG+ LS+ +NN +++ +
Sbjct: 561 RDIVYISMTRSNPDNRIGFLSDIRRMNVAMTRARKKLVVIGDSATLSQFDFYNNFISWAQ 620
Query: 928 EQ 929
++
Sbjct: 621 DR 622
>gi|406858745|gb|EKD11835.1| DNA-binding protein SMUBP-2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 690
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 246/482 (51%), Gaps = 65/482 (13%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ Q++KQ VLVC PSNI+V
Sbjct: 211 PSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQMLKQNLR-VLVCGPSNISV 269
Query: 562 DQLTEKIHRTGLKVVRVCAKSR----------EAIDSPVSFLALHNQIRNMEMNSE---L 608
D + E++ + +VR+ +R + + A+ +R EM+++ +
Sbjct: 270 DNIVERLAPHKIPIVRLGHPARLLPSVLNHSLDVLTQTSEAAAIVKDVRK-EMDTKQASI 328
Query: 609 KKLLQLKEETGELSSADE--KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
KK +E E K +R ++ SL+ + V+ T GAG + F
Sbjct: 329 KKTKSGRERKAIYGDLKELRKEFRERERKCIGSLIKGSKVVLATLHGAGGFQTKDEVFDV 388
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC----KKAARA---------- 712
++IDE+ QA E +C VP +L A +++L GDH QL P + K ++A
Sbjct: 389 VIIDEASQALEAQCWVP-LLRASKVVLAGDHLQLPPTIKTLNSKTKKSKAVETEGIIKGM 447
Query: 713 GLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI- 769
L +LF+RL+ L + L QYRMH ++ +FPS+ YE L + AD K +
Sbjct: 448 TLETTLFDRLLALHGPAIKRMLTTQYRMHEKIMRFPSDELYESKL---IAADGVKTRILK 504
Query: 770 DFPWPVPD-----KPMLFYVTQG--------QEEI---AGSGT---SYVNRTEASNVEKI 810
+ P+ V + KP++FY TQG +EE+ AG G S N EA+ V +
Sbjct: 505 ELPYEVAETEDTTKPLIFYDTQGGDFPEKNEEEEVDKKAGKGMMGDSKSNEMEAALVRQH 564
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
+ G++PE I VITPY Q A + ++ + + IE+ SVD FQGREK+
Sbjct: 565 VQSLVDAGVEPEDIAVITPYNAQLALIKSSIK-------EAFPGIELGSVDGFQGREKEA 617
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
+I+S VRSN + +GFL + RRLNVA+TR K ++VIG+ + L + F +E
Sbjct: 618 VIVSLVRSNSDKEVGFLGEKRRLNVAMTRPKRSLVVIGDSETLQGNKFLKRWMEFLEEHS 677
Query: 931 VL 932
L
Sbjct: 678 DL 679
>gi|167764772|ref|ZP_02436893.1| hypothetical protein BACSTE_03163 [Bacteroides stercoris ATCC
43183]
gi|167697441|gb|EDS14020.1| putative DNA helicase [Bacteroides stercoris ATCC 43183]
Length = 631
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 159/463 (34%), Positives = 242/463 (52%), Gaps = 39/463 (8%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R ++++ GPPGTGKT T +Y+ + +
Sbjct: 179 FRELYPVRF-----PWLNSTQESAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHRE 233
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN+AVD ++EK+ G+ V+R+ +R D +SF + N + E
Sbjct: 234 -PQVLVCAQSNMAVDWISEKLVDRGVNVLRIGNPTR-VNDKMLSF-TYERRFENHPLYPE 290
Query: 608 L---KKLLQLKEETGELSSADEK---RYRM---------LKKNAEKSLLDNADVICCTCV 652
L +K L+L S DE+ R RM L+ L D+A VI T V
Sbjct: 291 LWSIRKELRLLGGKSRRGSYDEREGIRNRMSRLRDRATTLEIQINSELFDSAHVIASTLV 350
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
+ L +F ++ IDE+ QA E C + I A +++L GDHCQL P + C +AAR
Sbjct: 351 SSNHRLLNGRRFGTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARG 409
Query: 713 GLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
GL ++L E++V L +VQYRMH ++ +F S++FY G L+ R + D
Sbjct: 410 GLERTLMEKVVAGKPSAVSLLKVQYRMHEDIMRFSSDWFYGGELEAAPEIRHRGILDWDT 469
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI-RCG---MKPEQI--G 825
P D + + +EE G +N+ EA + K +I R G + E+I G
Sbjct: 470 PVTWLDTSEMDF----KEEFVGETFGRINKEEAGLLLKELEAYIQRIGGNRILEERIDFG 525
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
+I+PY+ Q +L + +GS + Y+ I V +VD FQG+E+D+I +S VR+N+ I
Sbjct: 526 LISPYKAQVQYL--RGKIKGSASLRPYRSLITVNTVDGFQGQERDVIFISLVRANEEGQI 583
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
GFLND RR+NVA+TRA+ ++++G LS + LL + +
Sbjct: 584 GFLNDLRRMNVAITRARMKLVILGEAATLSHHAFYKKLLEYVR 626
>gi|326477246|gb|EGE01256.1| DNA-binding protein SMUBP-2 [Trichophyton equinum CBS 127.97]
Length = 716
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 260/538 (48%), Gaps = 77/538 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL-FRCHLPKHFSAPNLPDLNRSQVY 511
++ RM + K +S + + L GH L F P F P+L D SQ
Sbjct: 180 TYRRMNQTMAKLEKLQESEHSQLIRVLFGHTAPSPLDFESVGPLEFMDPSLND---SQKE 236
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ QLV Q VLVC PSNI+VD + E++
Sbjct: 237 AIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISVDNIVERLAL 295
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
+ +VR+ +R +D + L+ ++ ++++ + K+ K G
Sbjct: 296 HKVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERR 355
Query: 624 A---DEKRYRMLKKNAEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A D K R + E +DN + V+ T GAG +L KF +LIDE+ QA
Sbjct: 356 AIYGDLKELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAR 415
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA------------------------ 712
E +C +P +L A +++L GDH QL P + K ++ +
Sbjct: 416 EAQCWIP-LLPASRVVLAGDHLQLPPTIKSKSSSNSDQTNSALWDKEDLRFNELSNTFDM 474
Query: 713 -GLSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
L +LF+RL+ L GI+ L QYRMH ++ FPS+ YE L ER L
Sbjct: 475 RNLEITLFDRLLSLHGTGIKRM-LTTQYRMHQKIMDFPSDELYESKLIAADAVRERLLK- 532
Query: 769 IDFPWPVPD-----KPMLFYVTQG----QEEIAGSGTSY--------VNRTEASNVEKIT 811
D P+ V D +P++FY TQG ++ +G S N EA+ V +
Sbjct: 533 -DLPYEVEDTDDTREPLVFYDTQGGDFPEKSPDSNGISAKSPLVESKCNDMEAAVVARHV 591
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
+ G++PE I VITPY Q A L Q ++ + + +E+ SVD FQGREK+ +
Sbjct: 592 ENLVSAGVRPEDIAVITPYNAQVALLSQLLKEK-------FPTLELGSVDGFQGREKEAV 644
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKE 928
++S VRSN +GFL + RRLNVA+TR + + + G+ + +S P + F +E
Sbjct: 645 VVSLVRSNQDHEVGFLGEKRRLNVAMTRPRRHLCICGDSETVSSGSPFLKRWMAFLEE 702
>gi|242048802|ref|XP_002462147.1| hypothetical protein SORBIDRAFT_02g020475 [Sorghum bicolor]
gi|241925524|gb|EER98668.1| hypothetical protein SORBIDRAFT_02g020475 [Sorghum bicolor]
Length = 862
Score = 219 bits (559), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 241/464 (51%), Gaps = 53/464 (11%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
D ++S+ A+ +RP+ +IQGPPGTGKT + ++ V + G VLV APSN A+D
Sbjct: 393 DTSQSRALALALDKERPVLVIQGPPGTGKTRLLSYLI-TCVARRGERVLVTAPSNAAIDN 451
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI-------------RNMEMNSELKK 610
+ E + R+GLK+VRV SR I V+ ++L + + + +LK+
Sbjct: 452 IVESLSRSGLKIVRVGNPSR--ISPSVTSMSLGEIVTKRLEKFTQEFERKKYALRKDLKR 509
Query: 611 LLQLKEETGELSSADEKR-------YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+Q + L+S +R Y+ +K A + +L NA+V+ T GA DP + +
Sbjct: 510 CIQ---DDDSLASGIRQRLKKLGKDYKKEEKEAIREVLSNAEVVLSTNTGAADPLIRGMG 566
Query: 664 -FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
F ++IDE+ QATEP C +P++ G K+ IL GDH QL PV++ ++A GL SL ER
Sbjct: 567 CFDLVIIDEAGQATEPSCWIPILQG-KRCILAGDHRQLAPVILSREAMEGGLGISLLERA 625
Query: 723 VVL--GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP----VP 776
L G+ L QYRMH ++ + S Y+G LQ+ R L +D+P+ +
Sbjct: 626 SSLHDGLLTTTLTTQYRMHESIASWASKEMYDGLLQSFPPVASRLL--VDYPFVKATWMT 683
Query: 777 DKPMLFYVTQGQE-----------EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIG 825
+L T+ + ++AG+G S+ N EA V + I+CG+ P I
Sbjct: 684 QCALLLLDTRKEYGSLNIDCEESLDLAGTG-SFYNNGEADIVAQHVFNLIQCGVPPTSIV 742
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
V +PY Q L ++ + +EV+++D+FQGRE D +++S VRSN +G
Sbjct: 743 VQSPYIAQVQLLRGRLE-----EYPVASNVEVSTIDSFQGREADAVVISMVRSNSLGAVG 797
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
FL D RR+NVA+TRA+ + V+ + + LL ++
Sbjct: 798 FLGDIRRMNVAITRARSHVAVVCDTSTICNNAFLARLLRHIRQH 841
>gi|317475492|ref|ZP_07934755.1| hypothetical protein HMPREF1016_01737 [Bacteroides eggerthii
1_2_48FAA]
gi|316908323|gb|EFV30014.1| hypothetical protein HMPREF1016_01737 [Bacteroides eggerthii
1_2_48FAA]
Length = 633
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 242/466 (51%), Gaps = 43/466 (9%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R ++++ GPPGTGKT T +Y+ + +
Sbjct: 180 FRELYPVRF-----PWLNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHRE 234
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN+AVD ++EK+ G+ V+R+ +R D +SF + N + E
Sbjct: 235 -PQVLVCAQSNMAVDWISEKLVDRGVNVLRIGNPTR-VNDKMLSF-TYERRFENHPLYPE 291
Query: 608 L----KKLLQL--KEETGELSSADEKRYRM---------LKKNAEKSLLDNADVICCTCV 652
L K+L QL + G + R RM L+ L D+A VI T V
Sbjct: 292 LWSIRKELRQLGGRARRGSYDEREGIRSRMSRLRDRATALEVQINTELFDSAHVIASTLV 351
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
+ L F ++ IDE+ QA E C + I A +++L GDHCQL P + C +AAR
Sbjct: 352 SSNHRLLNGRHFGTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCYEAARG 410
Query: 713 GLSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
GL ++L E+ V +P L+VQYRMH ++ +F SN+FY+G L+ R +
Sbjct: 411 GLERTLMEK--VAASKPSAVSLLKVQYRMHEDIMRFSSNWFYDGELEAAPEIRHRGILDW 468
Query: 770 DFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK-ITTRFIRCG---MKPEQI- 824
D P D + + +EE G +N+ EA + K + +R G + E+I
Sbjct: 469 DTPVTWIDTSDMDF----KEEFVGETFGRINKEEAHLLLKELEAYILRIGGSRILEERID 524
Query: 825 -GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQ 882
G+I+PY+ Q +L + +GS + Y+ I V +VD FQG+E+D+I +S VR+N+
Sbjct: 525 FGLISPYKAQVQYL--RGKIKGSATLRPYRSLITVNTVDGFQGQERDVIFISLVRANEEG 582
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
IGFLND RR+NVA+TRA+ ++++G L + LL + K+
Sbjct: 583 QIGFLNDLRRMNVAITRARMKLVILGEAATLGHHAFYKQLLEYVKK 628
>gi|145247364|ref|XP_001395931.1| tRNA-splicing endonuclease [Aspergillus niger CBS 513.88]
gi|134080665|emb|CAK41330.1| unnamed protein product [Aspergillus niger]
Length = 2116
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 254/528 (48%), Gaps = 105/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQ---------------- 546
++N +Q A+K A+ +LIQGPPG+GKT T +V L+
Sbjct: 1287 NVNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGNQGVAISRPMGNA 1346
Query: 547 --------TGSPVLVCAPSNIAVDQLTEK-------IHRTGLKVVRVCAKSREAIDSPVS 591
T +LVCAPSN AVD+L + IH K+ + +AI++ V
Sbjct: 1347 KPAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKLSVIRLGRSDAINTNVL 1406
Query: 592 FLALHNQIRNMEMNSELKK----------------------------------------- 610
+ L +++ N +N +K
Sbjct: 1407 DVTL-DELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKETRARMDQCRAQGLPVPAE 1465
Query: 611 ------LLQLKEE--TGELSSADEKRY------RMLKKNAEKSLLDNADVICCTCVGAGD 656
LL+ K+ + E+ SA +K + + ++ ++ ++D A VIC T G+G
Sbjct: 1466 LEREFDLLKKKKTQLSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGH 1525
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A++
Sbjct: 1526 EMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQY 1585
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
QSLF R+ R L++QYRMHPE+S FPS+ FY+G LQ+G + ++ PW
Sbjct: 1586 EQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVR----PW 1641
Query: 774 PVPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIGVI 827
+ P F+ QG + A G S +N R E++ T F R +IG+I
Sbjct: 1642 HQSELLSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDF-RAFNFDRKIGII 1700
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L Q+ +I+ +I+ + DAFQGRE ++II SCVR+++ +GIGFL
Sbjct: 1701 TPYKGQLREL--KTQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASN-KGIGFL 1757
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
D RR+NV LTRAK + V+GN + L + WN L+ + + V +G
Sbjct: 1758 ADIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRNVYTDG 1805
>gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
gi|32397018|emb|CAD72321.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
Length = 763
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 241/460 (52%), Gaps = 54/460 (11%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN Q AV A+ +++I GPPGTGKT T A I+ Q V++ G VL CA SN AVD
Sbjct: 310 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVER-GERVLACAASNTAVD 368
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNMEMNSELKKLLQ-- 613
L E++ R VVRV +R +D+ V I++ + EL ++L+
Sbjct: 369 NLLERLVRLMPNVVRVGHPARVFESLQEHTLDALVESDPTSTVIKD--LRRELDQILREA 426
Query: 614 ---LKEETGELSSA------DEKRYRMLKKNAEKSL----LDNADVICCTCVGAGDPRLL 660
++E G + R R + ++ E+S+ +D ADVIC T D LL
Sbjct: 427 NRPIREGGGRERKQRAELFNEAGRLRGMIRSQERSIVRAVIDRADVICTTTT--IDEELL 484
Query: 661 KIK-FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ F +++DES Q TEP M IL A +LIL GDHCQL P V+ AAR G+ SL
Sbjct: 485 SDQSFDLVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLM 543
Query: 720 ERLV-VLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSL------QNGVCADERKLSKIDF 771
+RLV G + + RL VQYRM+ + +F S+ FY+G+L + + D + + DF
Sbjct: 544 QRLVHRYGEKIYRRLTVQYRMNESIMRFSSDHFYDGTLIADASVKRHLLCDLPNVEENDF 603
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVIT 828
+P+L T G +EE+ G S +N EA + ++ + G+ +QI VI
Sbjct: 604 ----TSEPLLLIDTAGAGYEEELEPDGQSKLNHGEAKVILQLVKQLADLGVTGDQIAVIA 659
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY Q L + G IE+ +VD FQGREK++++++ RSN IGFL+
Sbjct: 660 PYAAQVRNLRMRLDLDG---------IEIDTVDGFQGREKEVVLITMTRSNPDGEIGFLS 710
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D RR NVALTRAK +IV+G+ L ++ L ++++
Sbjct: 711 DQRRSNVALTRAKRKLIVVGDSATLCNHEFYSELFGYFED 750
>gi|425777077|gb|EKV15267.1| tRNA-splicing endonuclease, putative [Penicillium digitatum PHI26]
Length = 2154
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 260/521 (49%), Gaps = 100/521 (19%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------YQLVKQTGSPV--- 551
+NR+Q A+K A+ +LIQGPPG+GKT T +V QL+K G+PV
Sbjct: 1306 INRAQARAIKSAVDNDAFTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVNGAPVARN 1365
Query: 552 ------LVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVSFLALHN 597
L+CAPSN AVD+L ++ + G++ V V R +AI++ V + L +
Sbjct: 1366 ALSKKLLLCAPSNAAVDELVMRL-KDGVRTTNGRQEKVSVLRLGRSDAINTKVLDVTL-D 1423
Query: 598 QIRNMEMNS--------ELKKLLQ--------LKEETGELSSAD----------EKRYRM 631
++ N +N +L+KL + KE G+L A E+ + +
Sbjct: 1424 EMVNARLNQDPSKGNGVDLQKLYEEHKTTDTSFKELRGQLDEARAKGLPPPEELEREFDL 1483
Query: 632 LKKNAEK-------------SLLDNAD---------------VICCTCVGAGDPRL--LK 661
+KK + +L NAD VIC T G+G +
Sbjct: 1484 MKKKRSQLSTSIDKARDQNHTLARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQGMN 1543
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
++F +++IDE+ Q E ++P+ G + +LVGD QL P V+ K A++ QSLF R
Sbjct: 1544 VEFETVIIDEAAQCIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVR 1603
Query: 722 LVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--K 778
+ + L++QYRMHP +S FPS FY+G LQ+G D KL + PW +
Sbjct: 1604 MQKNHPQDVHLLDIQYRMHPAISHFPSVTFYDGKLQDG--PDMAKLRQ--RPWHQSELLS 1659
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQ-R 834
P F+ QG A G S +N E ++ R I + + +IG+ITPY+GQ R
Sbjct: 1660 PYRFFDVQGMHSSAARGHSLINYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLR 1719
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
Q Q G I ++++ + DAFQGRE ++II SCVR+++ +GIGFL D RR+N
Sbjct: 1720 ELKNQFTQRYGE---DILRKVDFNTTDAFQGRESEVIIFSCVRASN-KGIGFLADIRRMN 1775
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
V LTRAK + V+GN + L + WN L+ +E+ V EG
Sbjct: 1776 VGLTRAKSSLWVLGNSQSLEQGQFWNGLIKNARERNVYTEG 1816
>gi|425771573|gb|EKV10011.1| tRNA-splicing endonuclease, putative [Penicillium digitatum Pd1]
Length = 2154
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 260/521 (49%), Gaps = 100/521 (19%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------YQLVKQTGSPV--- 551
+NR+Q A+K A+ +LIQGPPG+GKT T +V QL+K G+PV
Sbjct: 1306 INRAQARAIKSAVDNDAFTLIQGPPGSGKTKTIIALVGSLLSDVLGKQLIKVNGAPVARN 1365
Query: 552 ------LVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVSFLALHN 597
L+CAPSN AVD+L ++ + G++ V V R +AI++ V + L +
Sbjct: 1366 ALSKKLLLCAPSNAAVDELVMRL-KDGVRTTNGRQEKVSVLRLGRSDAINTKVLDVTL-D 1423
Query: 598 QIRNMEMNS--------ELKKLLQ--------LKEETGELSSAD----------EKRYRM 631
++ N +N +L+KL + KE G+L A E+ + +
Sbjct: 1424 EMVNARLNQDPSKGNGVDLQKLYEEHKTTDTSFKELRGQLDEARAKGLPPPEELEREFDL 1483
Query: 632 LKKNAEK-------------SLLDNAD---------------VICCTCVGAGDPRL--LK 661
+KK + +L NAD VIC T G+G +
Sbjct: 1484 MKKKRSQLSTSIDKARDQNHTLARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQGMN 1543
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
++F +++IDE+ Q E ++P+ G + +LVGD QL P V+ K A++ QSLF R
Sbjct: 1544 VEFETVIIDEAAQCIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVR 1603
Query: 722 LVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--K 778
+ + L++QYRMHP +S FPS FY+G LQ+G D KL + PW +
Sbjct: 1604 MQKNHPQDVHLLDIQYRMHPAISHFPSVTFYDGKLQDG--PDMAKLRQ--RPWHQSELLS 1659
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQ-R 834
P F+ QG A G S +N E ++ R I + + +IG+ITPY+GQ R
Sbjct: 1660 PYRFFDVQGMHSSAARGHSLINYAELQVAMQLYDRLITDVKEYDFAGKIGIITPYKGQLR 1719
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
Q Q G I ++++ + DAFQGRE ++II SCVR+++ +GIGFL D RR+N
Sbjct: 1720 ELKNQFTQRYGE---DILRKVDFNTTDAFQGRESEVIIFSCVRASN-KGIGFLADIRRMN 1775
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
V LTRAK + V+GN + L + WN L+ +E+ V EG
Sbjct: 1776 VGLTRAKSSLWVLGNSQSLEQGQFWNGLIKNARERNVYTEG 1816
>gi|150004508|ref|YP_001299252.1| helicase [Bacteroides vulgatus ATCC 8482]
gi|149932932|gb|ABR39630.1| putative helicase [Bacteroides vulgatus ATCC 8482]
Length = 630
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 150/459 (32%), Positives = 244/459 (53%), Gaps = 48/459 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + V+VCA
Sbjct: 184 FGFTRFPWLNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCA 242
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ R D ++F R E + + +L ++
Sbjct: 243 QSNMAVDWISEKLVDRGVPVLRIGNPIR-VNDKMLAF----TYERRFESHPDYPQLWSIR 297
Query: 616 EETGELSSADEK----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ EL K R L+ ++L A VI CT V + + L
Sbjct: 298 KAIRELYGRSRKGAERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRIL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA EP C + I A ++IL GD+CQL P + C +AAR GL ++L
Sbjct: 358 TGRKFSTLFIDEAAQALEPACWI-AIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLM 416
Query: 720 ERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+ + +P L+VQYRM+ E+ +F S +FY+G L++ R S +D+
Sbjct: 417 QEIA--DNKPDTVSLLKVQYRMNDEIMRFSSEWFYQGELKSAPEVKYR--SILDY----- 467
Query: 777 DKPMLFYVTQG---QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCG---MKPEQI--GVI 827
D P+ + T+G EE G +N+ EA+ ++ ++T + G E+I G+I
Sbjct: 468 DTPIEWINTEGMECNEEFVGESFGRINKEEAALSISQLTNYINKIGKDRFLEERIDVGLI 527
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+PY+ Q +L Q ++ K Y+ I + +VD FQG+E+D+I++S VR+N+ IGF
Sbjct: 528 SPYKAQVQYLRQLIKRDAFF--KPYRHLITINTVDGFQGQERDVILISLVRANEEGQIGF 585
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
LND RR+NVA+TRA+ +I++G+ L+K P + L +
Sbjct: 586 LNDLRRMNVAITRARMKLIILGDASTLTKHPFYKKLYEY 624
>gi|449131912|ref|ZP_21768086.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
gi|448888721|gb|EMB19023.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
Length = 734
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 235/462 (50%), Gaps = 58/462 (12%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN Q AV A+ +++I GPPGTGKT T A I+ Q V++ G VL CA SN AVD
Sbjct: 281 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVER-GERVLACAASNTAVD 339
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNM---------EMN- 605
L E++ R VVRV +R +D+ V I+++ E N
Sbjct: 340 NLLERLVRLMPNVVRVGHPARVFESLQEHTLDALVESDPTSTVIKDLRRELDQILREANR 399
Query: 606 -------SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
E K+ +L E G L R ++ +S++D ADVIC T D
Sbjct: 400 PIRAGGGRERKQRSELFNEAGRLRGM----IRSQERGIVRSVIDRADVICTTTT--IDEE 453
Query: 659 LLKIK-FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
LL + F +++DES Q TEP M IL A +LIL GDHCQL P V+ AA+ G+ S
Sbjct: 454 LLSDQSFDLVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAAKIGMRDS 512
Query: 718 LFERLV-VLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI------ 769
L +RLV G R + RL VQYRM+ + +F S+ FY+ +L +L +
Sbjct: 513 LMQRLVHRYGERIYRRLTVQYRMNESIMRFSSDHFYDSTLIADASVKRHRLCDLPNVEEN 572
Query: 770 DFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
DF +P+L T G +EE+ G S +N EA + ++ + G+ +QI V
Sbjct: 573 DFTT----EPLLLIDTAGAGYEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAV 628
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
I PY Q L + G IE+ +VD FQGREK++++++ RSN IGF
Sbjct: 629 IAPYAAQVRNLRMRLDLDG---------IEIDTVDGFQGREKEVVLITMTRSNPDGEIGF 679
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
L+D RR NVALTRAK +IV+G+ L +++L ++++
Sbjct: 680 LSDQRRSNVALTRAKRKLIVVGDSATLCSHDFYSDLYGYFED 721
>gi|421612070|ref|ZP_16053189.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
gi|408497130|gb|EKK01670.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
Length = 734
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 235/462 (50%), Gaps = 58/462 (12%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN Q AV A+ +++I GPPGTGKT T A I+ Q V++ G VL CA SN AVD
Sbjct: 281 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVER-GERVLACAASNTAVD 339
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNM---------EMN- 605
L E++ R VVRV +R +D+ V I+++ E N
Sbjct: 340 NLLERLVRLMPNVVRVGHPARVFESLQEHTLDALVESDPTSTVIKDLRRELDQILREANR 399
Query: 606 -------SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
E K+ +L E G L R ++ +S++D ADVIC T D
Sbjct: 400 PIRAGGGRERKQRSELFNEAGRLRGM----IRSQERGIVRSVIDRADVICTTTT--IDEE 453
Query: 659 LLKIK-FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
LL + F +++DES Q TEP M IL A +LIL GDHCQL P V+ AA+ G+ S
Sbjct: 454 LLSDQSFDLVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAAKIGMRDS 512
Query: 718 LFERLV-VLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI------ 769
L +RLV G R + RL VQYRM+ + +F S+ FY+ +L +L +
Sbjct: 513 LMQRLVHRYGERIYRRLTVQYRMNESIMRFSSDHFYDSTLIADASVKRHRLCDLPNVEEN 572
Query: 770 DFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
DF +P+L T G +EE+ G S +N EA + ++ + G+ +QI V
Sbjct: 573 DFTT----EPLLLIDTAGAGYEEELEPDGQSKLNYGEAKVILQLVKQLADMGVTGDQIAV 628
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
I PY Q L + G IE+ +VD FQGREK++++++ RSN IGF
Sbjct: 629 IAPYAAQVRNLRMRLDLDG---------IEIDTVDGFQGREKEVVLITMTRSNPDGEIGF 679
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
L+D RR NVALTRAK +IV+G+ L +++L ++++
Sbjct: 680 LSDQRRSNVALTRAKRKLIVVGDSATLCSHDFYSDLFGYFED 721
>gi|357155053|ref|XP_003576992.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium
distachyon]
Length = 980
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 239/463 (51%), Gaps = 54/463 (11%)
Query: 504 DLNRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
D + SQ +A+ + +RP+ +IQGPPGTGKT + ++ V+Q VLV APSN AV
Sbjct: 503 DFDASQSHAIALGLNKKRPIVVIQGPPGTGKTGLLSNLIRCAVQQR-ERVLVTAPSNAAV 561
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI-RNMEM--------NSELKKLL 612
D + EK+ TGL +VRV SR I VS +L + R++E S L+K L
Sbjct: 562 DNMVEKLSGTGLNIVRVGNPSR--ISPSVSSKSLGEIVKRSLEKFTQEFQMKKSNLRKDL 619
Query: 613 QLKEETGELSSADEKRYRMLKKNAEKS-------LLDNADVICCTCVGAGDPRLLKIKFH 665
+ L++ +R + L KN K +L NA+V+ T +GA DP + I F
Sbjct: 620 NHCIQDDSLAAGIRQRLKKLGKNFRKKENETIKEILSNAEVVLSTNIGAADPLIKGIGFF 679
Query: 666 S-ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
++IDE+ QA EP C +P++ G K+ IL GD QL PV++ ++A GL SL +R
Sbjct: 680 DLVIIDEAGQAIEPSCWIPILQG-KRCILAGDQHQLAPVILSREAMEGGLGISLLQRASS 738
Query: 725 L--GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP----VPDK 778
L G+ +L +QYRMH ++ + SN Y G L++ R L +D+P+ +
Sbjct: 739 LHDGLLTTQLTMQYRMHESIASWASNEMYSGLLKSSPSVASRLL--VDYPFIQETWITRC 796
Query: 779 PMLFYVT-----------QGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVI 827
+L T + + AG+G S+ N EA V + + CG+ P I V
Sbjct: 797 ALLLLDTRMPYGSLNIDCEEHLDFAGTG-SFYNNGEADIVVQHVLNLVLCGVSPTAIAVQ 855
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQE---IEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
+PY Q L ++ Y E +EV+++D+FQGRE D +++S VRSN +
Sbjct: 856 SPYIAQVQLLRDTLEE--------YPEAYGVEVSTIDSFQGREADAVVISMVRSNSLGAV 907
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
GFL D RR+NVA+TRA+ ++++ + + LL +
Sbjct: 908 GFLGDSRRMNVAITRARRHVVLVCDSSTICNNAFLARLLRHIR 950
>gi|170097065|ref|XP_001879752.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645155|gb|EDR09403.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 829
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 153/478 (32%), Positives = 241/478 (50%), Gaps = 66/478 (13%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---QTGSPVLVCAP 556
P L LNRSQ+ AV I+ LSL+QGPPGTGKT T + +L+K + P+LVC
Sbjct: 295 PPLDGLNRSQIRAVATMIKHRLSLVQGPPGTGKTKTIIETI-KLLKVHFEIPHPILVCTY 353
Query: 557 SNIAVDQLTEKIHRTGLKVVRVC----------------------------AKSREAIDS 588
+N+AVD L E + G+K +RV A+ +E D
Sbjct: 354 TNVAVDNLVEGLVNAGVKALRVGFGGSIKESLRPHSLDTKLEEHRLQKTLKAQIKEKDDL 413
Query: 589 PVSFLALHNQIRNME---MNSELKKLLQLKEETGELSSADEKRYRMLK-------KNAEK 638
V L ++R+++ ++ +L++ ++ + + +K++ + K + +
Sbjct: 414 QVKMDDLEARLRDVQDKISSTSTGRLVEKEQNMKKALVSMQKQFAVTKMKVYSIQQEMLR 473
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHC 698
+++ AD IC TC+ + L F + +DE+ +TEP ++P++ G++ + L+GDH
Sbjct: 474 DVVNAADAICTTCITSACMALNVTDFPVVFLDEASMSTEPASLIPIMKGSRHVALIGDHK 533
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QL PV++ ++A GL SLFERL P L+VQYRMHP +S+FPS+ FY +L +
Sbjct: 534 QLPPVIISREAQALGLGMSLFERLTGEAAVPSVMLDVQYRMHPAISRFPSHEFYNRALLD 593
Query: 758 GVC----ADERKLSKIDFPWPVPD-----KPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
G +LS D + P P + ++ +E + S VNR EA V
Sbjct: 594 GTVDVFGNAIPRLSPPDSHYLRPHVETGASPSIVFLDHAGDE-SVKDRSRVNRNEAYIVA 652
Query: 809 KITTRFI--RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ-----------EI 855
+ + ++ IG+I PY Q + L + + A+ + I
Sbjct: 653 SVVEDLLLNNPHLRGSDIGIIAPYVAQISLLTRLFNTDATYQARFKEVLGDHRAMQLPHI 712
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
E+ +VD F+GREK++II S VR+N IGFL D RRLNV LTRAK G+IV+G+ L
Sbjct: 713 EIKTVDGFEGREKEVIIFSTVRNNAGGYIGFLADKRRLNVGLTRAKRGLIVVGSINTL 770
>gi|358371124|dbj|GAA87733.1| tRNA-splicing endonuclease [Aspergillus kawachii IFO 4308]
Length = 2117
Score = 219 bits (558), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 253/527 (48%), Gaps = 105/527 (19%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQ----------------- 546
+N +Q A+K A+ +LIQGPPG+GKT T +V L+
Sbjct: 1288 VNSAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSNVLGNQGVAISRPMGNAK 1347
Query: 547 -------TGSPVLVCAPSNIAVDQLTEK-------IHRTGLKVVRVCAKSREAIDSPVSF 592
T +LVCAPSN AVD+L + IH K+ + +AI++ V
Sbjct: 1348 PAGGRTTTSKKLLVCAPSNAAVDELVMRFKEGVKTIHGRQEKLSVIRLGRSDAINTNVLD 1407
Query: 593 LALHNQIRNMEMNSELKK------------------------------------------ 610
+ L +++ N +N +K
Sbjct: 1408 VTL-DELVNARLNQTARKDPGERDLQKIYMEHKAADTAFKETRARMDQCRAQGLPVPAEL 1466
Query: 611 -----LLQLKEE--TGELSSADEKRY------RMLKKNAEKSLLDNADVICCTCVGAGDP 657
LL+ K+ + E+ SA +K + + ++ ++ ++D A VIC T G+G
Sbjct: 1467 EREFDLLKKKKTQLSQEIDSARDKNHSAARDAELTRRRIQQEIIDGAHVICATLSGSGHE 1526
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A++
Sbjct: 1527 MFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQYE 1586
Query: 716 QSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
QSLF R+ R L++QYRMHPE+S FPS+ FY+G LQ+G + ++ PW
Sbjct: 1587 QSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSAFYDGRLQDGPNMAQLRVR----PWH 1642
Query: 775 VPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIGVIT 828
+ P F+ QG + A G S +N R E++ T F R +IG+IT
Sbjct: 1643 QSELLSPYRFFDVQGLHQSAAKGHSLINIAELRVAMQLYERLVTDF-RAFNFDRKIGIIT 1701
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY+GQ L Q+ +I+ +I+ + DAFQGRE ++II SCVR+++ +GIGFL
Sbjct: 1702 PYKGQLREL--KTQFAARYGNEIFNKIDFNTTDAFQGRESEVIIFSCVRASN-KGIGFLA 1758
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
D RR+NV LTRAK + V+GN + L + WN L+ + + V +G
Sbjct: 1759 DIRRMNVGLTRAKSSLWVLGNSQALVQGEFWNGLIKDARRRNVYTDG 1805
>gi|224026767|ref|ZP_03645133.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
gi|224020003|gb|EEF78001.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
Length = 607
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 243/458 (53%), Gaps = 46/458 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F P LNR+Q AV + + ++++ GPPGTGKT T VY+ + + VLVCA
Sbjct: 161 FQPVRFPWLNRTQEEAVNKVLHAKDVAIVHGPPGTGKTTTLVEAVYETLHRENQ-VLVCA 219
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ SR D +SF R E + + +L ++
Sbjct: 220 QSNMAVDWISEKLVDRGVSVLRIGNPSR-VNDKMLSF----TYERRFESHPDYPQLWSIR 274
Query: 616 EETGEL-----SSADEKRYRM----LKKNAEK-------SLLDNADVICCTCVGAGDPRL 659
+ EL ++D + R LK A + SL A VI CT V + + L
Sbjct: 275 KAVRELYARMRKASDRESIRQKINSLKDRATELEIRINASLFAEARVIACTLVSSANRLL 334
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA E C +P I ++IL GDHCQL P V C +A RAGL ++L
Sbjct: 335 EGQKFGTLFIDEAAQALEAACWIP-IRKVDRVILAGDHCQLPPTVKCPQALRAGLGETLM 393
Query: 720 ERLV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
+ +V + + L++QYRM+ E+ +F S++FY G +Q+ R + D P
Sbjct: 394 QTIVKNKPETVAL----LKLQYRMNEEIMRFSSDWFYGGMVQSAPEVKYRSILDFDTPIE 449
Query: 775 VPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--GVIT 828
D + EE G +N+ EA +V ++ T + G + E+I G+I+
Sbjct: 450 WIDTEDM----DCNEEFVGENYGRINKAEAELSVSQLKTYITKIGRERFLEERIDVGLIS 505
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
PY+ Q +L Q ++ K Y+ I V +VD FQG+E+D+I++S VR+N+ IGFL
Sbjct: 506 PYKAQVQYLRQLLKRDPFF--KPYRSLITVNTVDGFQGQERDVILISLVRANEDGQIGFL 563
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
+D RR+NVA+TRA+ +I++G+ L++ + L +
Sbjct: 564 SDLRRMNVAITRARMKLIILGDVSTLTRHAFYRKLYEY 601
>gi|406606341|emb|CCH42332.1| Regulator of nonsense transcripts 1 [Wickerhamomyces ciferrii]
Length = 1077
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 260/499 (52%), Gaps = 62/499 (12%)
Query: 474 YIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT 533
+ + LLG N+ + P + P LN Q+ A+ + P++++QGPPGTGKT
Sbjct: 577 FFQNMLLGKNLLNQTNKTLRPLKY--PTTTKLNNPQLIAINQVLDNPITILQGPPGTGKT 634
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT-GLKVVRVCAKSREAIDSP--- 589
T ++ QLVK T P+LV A SN+A+D + EK+ + L+++R+ + ++E+ +
Sbjct: 635 STINELILQLVKDT-YPILVVAASNVAIDNIAEKLMKNKDLEILRILSTAKESEYNERHH 693
Query: 590 VSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICC 649
++ + LH ++ + + L K + +++ + L+ L+++A VI
Sbjct: 694 LNPICLHRKVFDNLPTEKQDLYLDFKMDRRQINKNEFFALTKLQIKETDKLVNSAKVILT 753
Query: 650 TCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCK 707
T + AG P L + K +++DES Q+ E +VP+ L G ++++LVGD QL
Sbjct: 754 TTITAGGPHLRHLDKIPILIMDESTQSNEASTLVPLSLKGLEKILLVGDEKQLSSF---- 809
Query: 708 KAARAGLSQSLFERLVVLG--IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
L QSLFER++ G P L++QYRM+P++SKFP+ FYE L +GV +R
Sbjct: 810 -NDIPYLEQSLFERVLKNGTYFNPNMLQIQYRMNPKISKFPNIKFYENKLIDGVTEQDRT 868
Query: 766 ------LSKIDFPWPVPD-----KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF 814
L ID+ + P+ F + +G+ +SY N EA+ + K+
Sbjct: 869 TFGIPPLLFIDYGDHYKETQSLKNPIKFLIN------SGNISSYQNIGEANLILKLIYEL 922
Query: 815 I-RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP---AKIYQEIE-------------- 856
+ G+ + IG+ITPY QR + Q ++ + KI +EI+
Sbjct: 923 NHKGGINLKDIGIITPYSSQRDIIAQLIRNDRKINPNFEKIQEEIDDDFNHSNNSQFKKP 982
Query: 857 ----------VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
++S+DAFQGREK+ II SCVRSN+ IGF+ D RRLNVALTRAK + +
Sbjct: 983 SSIKTICGLMISSIDAFQGREKNHIIFSCVRSNEFNKIGFVKDLRRLNVALTRAKNSLTI 1042
Query: 907 IGNPKVLSK-QPLWNNLLN 924
+GN + + +WN+L+N
Sbjct: 1043 VGNKSCMKQGDSVWNDLIN 1061
>gi|302800219|ref|XP_002981867.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
gi|300150309|gb|EFJ16960.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
Length = 643
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 151/455 (33%), Positives = 234/455 (51%), Gaps = 36/455 (7%)
Query: 500 PNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
P +L+ SQV AVK A+ + + L+ GPPGTGKT I+ Q VK+ G VL CA SN
Sbjct: 190 PYNTELDESQVKAVKMALSAQDVMLLHGPPGTGKTTAVVEIILQEVKR-GLKVLACASSN 248
Query: 559 IAVDQLTEKIHRTGLKVVRV------------CAKSREAIDSPVSFLALHNQIRNMEMNS 606
IAVD + E++ +KVVR+ CA + + + S LA + +N+
Sbjct: 249 IAVDNMVERLACHKVKVVRLGHPARLLPQVLDCALDAQVLKTDNSSLAKDIRKEISVLNA 308
Query: 607 EL------KKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
++ K +L+ E +LS + +R ++ A ++ A V+ T GA +L
Sbjct: 309 KILKAKDRKSRDELRRELRQLSKEERQR----QQKAVTDVIQGASVVLTTLTGAMSAQLQ 364
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
K+ F +++DE+ QA E C + ++ G ++ +L GDH QL P V+ K+A + G +LFE
Sbjct: 365 KVDFDVVVLDEAAQALETACWIAILKG-RRCLLAGDHLQLAPTVLSKEAEKQGFGTTLFE 423
Query: 721 RLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF--PWPVP 776
RL L L VQYRMH + + S+ Y G +Q RKL ++D P
Sbjct: 424 RLAGLYASQAMTMLTVQYRMHEHIMDWSSHELYGGKIQAHELVASRKLFELDGVKKTPAT 483
Query: 777 DKPMLFYVTQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQR 834
+ ++ G EE S N EA + + G+K IG++TPY Q
Sbjct: 484 EHTLVLIDICGCDMEESKDETESSFNEGEARIAITHAQKLVESGVKAIDIGIVTPYAAQV 543
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
L + + L E+E++++D FQGREK+ +I+S VRSND + +GFL+D RR+N
Sbjct: 544 NVLRRMRNEEQRL-----LEVEISTIDGFQGREKEAMIISMVRSNDKKEVGFLSDKRRMN 598
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
VA+TRAK VI + + K P LL+++++
Sbjct: 599 VAVTRAKRQCCVICDSDTVGKDPFLKRLLDYFEKH 633
>gi|398411081|ref|XP_003856885.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
gi|339476770|gb|EGP91861.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
Length = 685
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 176/516 (34%), Positives = 253/516 (49%), Gaps = 78/516 (15%)
Query: 486 EVLFRCHLPKHFSAPNL--------PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTS 536
+VLF P S +L P LN SQ A++ A+ R ++LI GPPGTGKT T
Sbjct: 176 QVLFGHSSPTPISESDLKAAIEWNDPTLNDSQKDAIQFALASREVALIHGPPGTGKTHTL 235
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR----------VCAKSREAI 586
++ Q+VK +LVC PSNI+VD + E++ + +VR V + S E +
Sbjct: 236 IELILQMVKLKLR-LLVCGPSNISVDNIVERLAPHKVNMVRLGHPARLLPGVLSHSMEYL 294
Query: 587 DSPVSFLALHNQIRNMEMNSE---LKKLLQLKEET---GELSSADEKRYRMLKKNAEKSL 640
A+ +RN EM+++ ++K +E GEL K YR + L
Sbjct: 295 SRTSDAAAIVTDVRN-EMDAKQASIRKTRNGRERRVIYGELKDL-RKEYRQREGRVVSDL 352
Query: 641 LDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQ 699
L + V+ T G+G +L +F +++DE+ QA E +C +PV+ GA +LIL GDH Q
Sbjct: 353 LRGSGVVLSTLHGSGGYQLKDQQFDVVIVDEASQALEAQCWIPVLSSGASKLILAGDHLQ 412
Query: 700 LGPVV--MCKKAAR---------------AGLSQSLFERLVVL-GIRPFR-LEVQYRMHP 740
L P + + K A+ L +LF+RL+ L G + R L QYRMH
Sbjct: 413 LPPTIKSLNSKTAKKTSTKVENATEGEDHVKLETTLFDRLLALHGSKIKRMLTTQYRMHD 472
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV-----PDKPMLFYVTQG-----QEE 790
+ ++PS YEG L R L D P+ V +P++FY T G + E
Sbjct: 473 LIMQYPSEALYEGKLIAAEAVKARLLH--DLPYEVRKTDDTSEPVVFYDTAGGDFPEKTE 530
Query: 791 IAGSGT---------SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
SG S VN EA + I G+K E I +ITPY GQ A L Q +
Sbjct: 531 DDNSGAKGKSSLLAESKVNEYEAGIAQLHVKSLIEAGVKAEDIAIITPYNGQLALLSQML 590
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
+ + Y IE+ SVD FQGREK+ +I+S VRSN +GFL + RRLNVA+TR K
Sbjct: 591 KDR-------YPGIELESVDGFQGREKEAVIVSLVRSNPEHEVGFLAEKRRLNVAMTRPK 643
Query: 902 YGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVLVEGP 936
++VIG+ + + + N + F EQK + P
Sbjct: 644 RALVVIGDSETICRGSKFLKNWMAFL-EQKADLRYP 678
>gi|347827230|emb|CCD42927.1| similar to DNA helicase [Botryotinia fuckeliana]
Length = 703
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 243/466 (52%), Gaps = 66/466 (14%)
Query: 503 PDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ +A+K A+ ++LI GPPGTGKT T ++ Q++K+ VLVC PSNI+V
Sbjct: 223 PSLNDSQKHAIKFALASTEMALIHGPPGTGKTHTLIELILQMLKRNLR-VLVCGPSNISV 281
Query: 562 DQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFL-------ALHNQIRNMEMNSE---L 608
D + E++ + +VR+ +R ++ + L A+ +R EM+++ +
Sbjct: 282 DNIVERLAPHKVPIVRLGHPARLLPSVVNHSLDVLTQTSEAAAIVQDVRK-EMDTKQASI 340
Query: 609 KKLLQLKEETGELSSADE--KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
KK KE E K +R ++ +L+ + V+ T GAG +L KF
Sbjct: 341 KKTKSGKERKAIYGDLKELRKEFRERERKCVNTLVGGSKVVLATLHGAGGFQLRDEKFDV 400
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC---KKAARA----------- 712
++IDE+ QA E +C VP +L A +++L GDH QL P + K ++
Sbjct: 401 VIIDEASQALEAQCWVP-LLSASKVVLAGDHLQLPPTIKSLNFKTKTKSQDTETEGIIKG 459
Query: 713 -GLSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
L +LF+RL+ L GI+ L QYRMH ++ +FPS+ YE L R L+
Sbjct: 460 MTLETTLFDRLLKLHGAGIKVM-LTTQYRMHEKIMRFPSDELYESKLVAAEAVKARLLT- 517
Query: 769 IDFPWPVPD-----KPMLFYVTQGQE-----------EIAGSGT---SYVNRTEASNVEK 809
+ P+ V + +P++F+ TQG + + AG G S N EA V +
Sbjct: 518 -ELPYDVEETEDTIEPLIFFDTQGDDFPEKSEEENVDKKAGKGMLGESKSNEMEAVLVRR 576
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
+ G+KPE I V+TPY Q A + + M+ + + IE+ SVD FQGREK+
Sbjct: 577 HVQNLVDAGLKPEDIAVVTPYNAQLALMSRSMK-------EAFPGIELGSVDGFQGREKE 629
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
II+S VRSN + +GFL + RRLNVA+TR + + +IG+ + +S+
Sbjct: 630 AIIVSLVRSNSEREVGFLGEKRRLNVAMTRPRRSLTIIGDSETVSR 675
>gi|154311776|ref|XP_001555217.1| hypothetical protein BC1G_06347 [Botryotinia fuckeliana B05.10]
Length = 675
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 243/466 (52%), Gaps = 66/466 (14%)
Query: 503 PDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ +A+K A+ ++LI GPPGTGKT T ++ Q++K+ VLVC PSNI+V
Sbjct: 223 PSLNDSQKHAIKFALASTEMALIHGPPGTGKTHTLIELILQMLKRNLR-VLVCGPSNISV 281
Query: 562 DQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFL-------ALHNQIRNMEMNSE---L 608
D + E++ + +VR+ +R ++ + L A+ +R EM+++ +
Sbjct: 282 DNIVERLAPHKVPIVRLGHPARLLPSVVNHSLDVLTQTSEAAAIVQDVRK-EMDTKQASI 340
Query: 609 KKLLQLKEETGELSSADE--KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
KK KE E K +R ++ +L+ + V+ T GAG +L KF
Sbjct: 341 KKTKSGKERKAIYGDLKELRKEFRERERKCVNTLVGGSKVVLATLHGAGGFQLRDEKFDV 400
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC---KKAARA----------- 712
++IDE+ QA E +C VP +L A +++L GDH QL P + K ++
Sbjct: 401 VIIDEASQALEAQCWVP-LLSASKVVLAGDHLQLPPTIKSLNFKTKTKSQDTETEGIIKG 459
Query: 713 -GLSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
L +LF+RL+ L GI+ L QYRMH ++ +FPS+ YE L R L+
Sbjct: 460 MTLETTLFDRLLKLHGAGIK-VMLTTQYRMHEKIMRFPSDELYESKLVAAEAVKARLLT- 517
Query: 769 IDFPWPVPD-----KPMLFYVTQGQE-----------EIAGSGT---SYVNRTEASNVEK 809
+ P+ V + +P++F+ TQG + + AG G S N EA V +
Sbjct: 518 -ELPYDVEETEDTIEPLIFFDTQGDDFPEKSEEENVDKKAGKGMLGESKSNEMEAVLVRR 576
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
+ G+KPE I V+TPY Q A + + M+ + + IE+ SVD FQGREK+
Sbjct: 577 HVQNLVDAGLKPEDIAVVTPYNAQLALMSRSMK-------EAFPGIELGSVDGFQGREKE 629
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
II+S VRSN + +GFL + RRLNVA+TR + + +IG+ + +S+
Sbjct: 630 AIIVSLVRSNSEREVGFLGEKRRLNVAMTRPRRSLTIIGDSETVSR 675
>gi|374586342|ref|ZP_09659434.1| AAA ATPase [Leptonema illini DSM 21528]
gi|373875203|gb|EHQ07197.1| AAA ATPase [Leptonema illini DSM 21528]
Length = 646
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 251/526 (47%), Gaps = 66/526 (12%)
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 505
D W+ F Q+ + ++ A + RLLG+ L P + +L
Sbjct: 128 DLTWREMRFALQQMLEAEDQKGEKGQRARLRDRLLGYTELSALTLESEPHRSN-----EL 182
Query: 506 NRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
N SQ AV + P +++ GPPGTGKT T + L ++ S VLVCA +N AVD L
Sbjct: 183 NASQDEAVTGILNTPDFAVVHGPPGTGKTTTLVAAIAALYRREES-VLVCAATNAAVDLL 241
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL--- 621
K+ G+ V+R+ +R + L L + ME SE K L + + E +L
Sbjct: 242 ALKLDEQGIPVLRIGHPAR--VYDAAQALTLEGR---MESRSEAKLLAKYRAEAAQLFRQ 296
Query: 622 ----------------------SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
A +K R ++K A +++ V+C T GA P +
Sbjct: 297 ARRFRRSFGAAERAERESLFAEYRALQKTIREMEKTALGDIIERTPVVCATLTGASHPSI 356
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ +F +++IDE+ QA EP C +P++ +++I+ GDH QL P++ + LS++LF
Sbjct: 357 REKRFTTVVIDEATQALEPACYIPLLKNPERIIMAGDHQQLAPLIRLPASP---LSETLF 413
Query: 720 ERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+++ R F L QYRM P + F + FYEG L V D S ++ P P+
Sbjct: 414 AKMIERHKDSGRVFFLNEQYRMQPVILGFSNQRFYEGRL---VTHD----SVLNRP-PMR 465
Query: 777 DKP---------MLFYVTQGQ---EEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PEQ 823
KP +LF T G EE S NR EA + +I R +R G PE
Sbjct: 466 MKPEAEVSLTGSLLFVDTAGSDATEEQDADSESRFNRFEAMLLVRIVERMLRLGEDDPES 525
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
+ +I PY Q L +LP Q IEV +VD+FQG E+D I +S R+N+
Sbjct: 526 VALIAPYRAQVDLLRSLCSDVATLPTG--QAIEVDTVDSFQGAERDWIGVSFTRNNEEAE 583
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
IGFL D RR NVA+TRA+ +I++G+ LS P + +L+ + + +
Sbjct: 584 IGFLKDLRRTNVAMTRARRRLILVGDSTTLSMHPFYADLIAYAQSE 629
>gi|301116633|ref|XP_002906045.1| DNA polymerase alpha-associated DNA helicase A, putative
[Phytophthora infestans T30-4]
gi|262109345|gb|EEY67397.1| DNA polymerase alpha-associated DNA helicase A, putative
[Phytophthora infestans T30-4]
Length = 988
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 266/538 (49%), Gaps = 69/538 (12%)
Query: 439 ATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFS 498
AT G ++D + + +F ++ AL DQ + V +V+F P ++
Sbjct: 147 ATAGVTLDRLVNNATFLKLTSAL------DQMTK---FEFGAAQTVVDVVFSEREP-SWN 196
Query: 499 APNLPD-------LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
P LPD LN SQV AV+ A+ + L+LI GPPGTGKT T + Q V +
Sbjct: 197 TP-LPDITPFNTGLNESQVEAVRFALASKDLALIHGPPGTGKTTTVVEFILQAVTRFDLK 255
Query: 551 VLVCAPSNIAVDQLTEKIH------RTGLKVVRVCAKSR----------EAIDSPVSFLA 594
VLVCAPSNIAVD + +K+ R LK+ R+ +R +A
Sbjct: 256 VLVCAPSNIAVDNVLDKLASTCSTLRKKLKLTRIGHPARVLPQILNYCLDAKIESAEGTE 315
Query: 595 LHNQIRNMEMNSELKKLLQLKEETGELS-----SADEKRYRMLKKNAEKSLLDNADVICC 649
+ N IR EM+S KKL + ++++ A+ K R ++ ++ ++DV+
Sbjct: 316 IVNDIRQ-EMSSMQKKLQKTRDKSERYRLRREMKANRKEIRTREQKVVGDIIRHSDVVFA 374
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
T VGA L + F ++IDE+ QA E C +P +L AK+ +L GDH QL P + + A
Sbjct: 375 TNVGAASKLLKDVTFDLVIIDEAAQALEASCWIP-MLKAKRCVLAGDHLQLPPTIKSRAA 433
Query: 710 ARAGLSQSLFERLV----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
A GL +LF+R+ I L+ QYRMH ++S++ S Y+G L++ RK
Sbjct: 434 AAKGLEVTLFDRVTSYTNTQSIVKM-LDTQYRMHQDISEWSSQAMYKGELKSFEGVARRK 492
Query: 766 LSKIDFPWPVPDKPMLFYVTQ------------GQEEIAGSGT---SYVNRTEASNVEKI 810
L ++ + +L ++E S T S N EA V +
Sbjct: 493 LHELPHVSISKEDELLDATLLLLDTAGCELEEDAKDEEKASSTLQLSKSNEGEAHVVARH 552
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
+ ++ G+K E++ VITPY Q +Q +L + Y ++E+ SVD FQG EK+
Sbjct: 553 VSALLKAGLKEEEVAVITPYNKQ-------VQTLKALLLESYPKLEIRSVDGFQGCEKEA 605
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
++MS VRSN + +GFL D RR+NVA+TRAK + V+ + +S + L+ +++
Sbjct: 606 VVMSLVRSNASRQVGFLADDRRMNVAITRAKRHVAVVCDTDTISSHKFLSGLVKHFEK 663
>gi|302309402|ref|NP_986774.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|299788342|gb|AAS54598.2| AGR108Cp [Ashbya gossypii ATCC 10895]
gi|374110024|gb|AEY98929.1| FAGR108Cp [Ashbya gossypii FDAG1]
Length = 930
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 160/488 (32%), Positives = 255/488 (52%), Gaps = 63/488 (12%)
Query: 486 EVLFRCHLPKHFSAPNLP----------DLNRSQ--VYAVKHAIQRPLSLIQGPPGTGKT 533
++L + LP PN P LN SQ YA HA + +SLI+GPPGTGKT
Sbjct: 458 QLLLKATLPN----PNPPADDLIIEDFGKLNESQEAAYAYFHANR--ISLIKGPPGTGKT 511
Query: 534 VTSATIVYQLVK-QTGSPVLVCAPSNIAVDQLTEKI-HRTGLKVVRVCAKSR---EAIDS 588
I+ + VK +TG PVL A SN+AVD + E++ ++ VR+CA +R +
Sbjct: 512 AVIVEIIKRTVKLETGCPVLCTAGSNVAVDNIAERLLGDPTVRPVRICAGARIEQYPDEH 571
Query: 589 PVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADV 646
P++ + LH I ++ + +KL L + G++ + + M + ++ +A+V
Sbjct: 572 PLAPICLHTHILK-QLPPQYQKLYLLWAK-GDVDNDSPGFHEMVLIANRVSYDIVSDANV 629
Query: 647 ICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVV 704
+ T + AG+ + K+ + ++++DE+ QATE +VP+ L G ++L+LVGD QL P
Sbjct: 630 LLATNISAGNRSIRKLPEVPTVIMDEATQATEASTLVPLALAGIQKLVLVGDEKQLPPFA 689
Query: 705 MCKKAARAGLSQSLFERLVVLGIRPFR----LEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
+ + SLF R+V P L++QYRMHP + +FP+ FY+ L+NGV
Sbjct: 690 LSRNP-----KTSLFNRVVTRS--PAEDLQFLKIQYRMHPAICEFPNMQFYDNRLRNGVT 742
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGT-----SYVNRTEASNVEKITTRFI 815
++R W +P++F E G S+ N EA V + +
Sbjct: 743 PEDRS-------WLGVQEPVVFIDIPSSAERRGQAAASQDMSWCNLAEADFVCATLRKLV 795
Query: 816 -RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY---------QEIEVASVDAFQG 865
+ + P QIGVITPY QR + + +L A + +++ VASVDAFQG
Sbjct: 796 SKKHVPPSQIGVITPYVAQRDAIASRLARDTTLAAHVTMHEVADPDSKQLMVASVDAFQG 855
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLN 924
E+ II SCVRSN +GF++D RR+NVALTRA+ G+IV+G+ L+K +W +
Sbjct: 856 HERAFIIFSCVRSNSDGQLGFVSDRRRMNVALTRARNGLIVVGHADTLAKGSKIWRAYIT 915
Query: 925 FYKEQKVL 932
+ + + ++
Sbjct: 916 YLRSRDLV 923
>gi|302656653|ref|XP_003020078.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
gi|291183859|gb|EFE39454.1| hypothetical protein TRV_05851 [Trichophyton verrucosum HKI 0517]
Length = 2139
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 258/528 (48%), Gaps = 105/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------KQTGSP------ 550
DLN +Q A+K A+ +LIQGPPG+GKT T IV L+ ++ P
Sbjct: 1302 DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERKVPQPKIASDS 1361
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGLK----------VVR------------ 577
+LVCAPSN AVD+L + + G+K V+R
Sbjct: 1362 AQASKSAPSKKLLVCAPSNAAVDELVMRF-KEGVKTLNGKTQPISVIRLGRSDAINANVL 1420
Query: 578 -------VCAK------------------SREAIDSPVSFLALHNQI-----RNMEMNSE 607
V AK E ++ F+ + +I R +++E
Sbjct: 1421 DVTLDELVNAKLNQSDQKKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRTRAEPVSNE 1480
Query: 608 LKKLLQL-KEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A D R + + ++ ++ ++D A VIC T G+G
Sbjct: 1481 LEREFDLLKRKKAQLSQAIDNARDKNHAAARNAELTRRRIQQEIIDGAHVICSTLSGSGH 1540
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K+A+R
Sbjct: 1541 EMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQY 1600
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFP 772
QSLF R+ L+ QYRMHPE+SKFPS FY+G LQ+G A RK P
Sbjct: 1601 EQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKK-----P 1655
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVI 827
W + P F+ QG A G S VN E + ++ R + R +IG+I
Sbjct: 1656 WHGSELLGPYRFFDVQGMHSSAAKGHSLVNIAELTVAMRLYERLVADYRNYDFAGKIGII 1715
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L ++ + I+ +E + DAFQGRE ++II SCVR++D +GIGFL
Sbjct: 1716 TPYKGQLREL--KSRFAAKYGSSIFTAVEFNTTDAFQGRECEVIIFSCVRASD-RGIGFL 1772
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+D RR+NV LTRAK + V+GN + L + W L++ +E+++ EG
Sbjct: 1773 SDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEG 1820
>gi|281202655|gb|EFA76857.1| putative splicing endonuclease [Polysphondylium pallidum PN500]
Length = 1423
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 260/552 (47%), Gaps = 93/552 (16%)
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
++ +R LAL V + +YI L E +P L +LN SQ+
Sbjct: 760 STVNREYLALH--LVGKIPLGSYIISPALAITNQERTNNVVIPPALHNKLLSELNSSQME 817
Query: 512 AVKHA-IQRPLSLIQGPPGTGKTVTSATIVYQL--------VKQTGSP-VLVCAPSNIAV 561
A+ H+ I +L+QGPPGTGKT T ++ L + T P +LVCAPSN AV
Sbjct: 818 AIYHSLIPHGFTLLQGPPGTGKTKTIMALLSVLLSTPLDSKINSTAPPKILVCAPSNAAV 877
Query: 562 DQLTEKIHR-------------TGLKVVRVCAKSREAIDSPVSFLALHNQIR-NMEMNSE 607
D++ +I + +++ + A SR+ + +L N + +N E
Sbjct: 878 DEIASRIIDGDMFDKDGNSYVPSAIRIGQPSAISRKVQQISLEYLLEKNSNDPSTSLNFE 937
Query: 608 LKKLLQLKEETGELSSADE--------------------------------KRYRMLK-- 633
K++ ++E+ E++S+ E ++ R+ K
Sbjct: 938 QSKIISVREKLAEINSSLESVKQKISTLQRSLGTSLGTATDSTRDLTTLYHEKDRLFKEI 997
Query: 634 ------------------KNAEKSLLDNADVICCTCVGAGDPRLLKI--KFHSILIDESM 673
KN SLL+ ++I T G+G KF ++IDE+
Sbjct: 998 QATKDSEKKVSDVLESARKNMAHSLLNKCNIILSTLSGSGHQETFSAIKKFDVVIIDEAA 1057
Query: 674 QATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE 733
QA EP ++P+ + ILVGD QL P ++ + A++ SLF+RL GI L+
Sbjct: 1058 QAVEPSTLIPLKHNVMKCILVGDPNQLPPTIISRMASQYQYETSLFQRLSSCGIPQQVLK 1117
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAG 793
VQYRMHP +S+FPS FY L++G K +F P +FY E +G
Sbjct: 1118 VQYRMHPSISRFPSRHFYMNVLEDGPNV---KNYTEEFYKDPRFGPFIFYDIYDSNEESG 1174
Query: 794 SGTSYVNRTEASNVEKITTRFIRC--GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI 851
G S N TEA V + T +K + IGVITPY+ Q V ++ + S +
Sbjct: 1175 PGHSLKNVTEAKLVALLITNLENSFPNIK-KSIGVITPYKQQ----VHEIKRRIS---PV 1226
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPK 911
Q+I+V+SVD FQGREKD+II SCVR++ IGFL+D RR+NV LTRA+ +IVIGN
Sbjct: 1227 NQDIDVSSVDGFQGREKDIIIFSCVRAHRGGTIGFLSDVRRMNVGLTRARSSLIVIGNSN 1286
Query: 912 VLSKQPLWNNLL 923
+L P W L+
Sbjct: 1287 LLKLNPDWEALV 1298
>gi|423298652|ref|ZP_17276707.1| hypothetical protein HMPREF1070_05372 [Bacteroides ovatus
CL03T12C18]
gi|392662021|gb|EIY55587.1| hypothetical protein HMPREF1070_05372 [Bacteroides ovatus
CL03T12C18]
Length = 645
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 262/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 139 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 196
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 197 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 251
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 252 -VLVCAQSNTAVDWICEKLVDRGVAVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 310
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 311 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 360
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 361 IASTLVSSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 419
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+R GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 420 IEASRGGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRG 479
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCGMK---P 821
+ D P D + + E+ G +N+ EA+ + +++ T R G K
Sbjct: 480 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKKRILD 535
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 536 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 593
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 594 NEDGQIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKE 644
>gi|327306928|ref|XP_003238155.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
gi|326458411|gb|EGD83864.1| tRNA-splicing endonuclease [Trichophyton rubrum CBS 118892]
Length = 2196
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 169/527 (32%), Positives = 256/527 (48%), Gaps = 103/527 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------KQTGSP------ 550
DLN +Q A+K A+ +LIQGPPG+GKT T IV L+ ++ P
Sbjct: 1317 DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERRVSQPKIISDS 1376
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGLK----------VVR------------ 577
+LVCAPSN AVD+L + + G+K V+R
Sbjct: 1377 AQASKSASSKKLLVCAPSNAAVDELVMRF-KEGVKTLNGKTQPISVIRLGRSDAINANVL 1435
Query: 578 -------VCAK------------------SREAIDSPVSFLALHNQI-----RNMEMNSE 607
V AK E ++ F+ + +I R +++E
Sbjct: 1436 DVTLDELVNAKLNQSGQTKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRARAEPVSNE 1495
Query: 608 LKKLLQL-KEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A D R + + ++ ++ ++D A VIC T G+G
Sbjct: 1496 LEREFDLLKRKKAQLSQAIDNARDKNQAAARNAELTRRRIQQEIIDGAHVICSTLSGSGH 1555
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K+A+R
Sbjct: 1556 EMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQY 1615
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
QSLF R+ L+ QYRMHPE+SKFPS FY+G LQ+G + PW
Sbjct: 1616 EQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPAMGPLRKK----PW 1671
Query: 774 PVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVIT 828
+ P F+ QG A G S VN E + ++ R + E +IG+IT
Sbjct: 1672 HGSELLGPYRFFDVQGMHSSATKGHSLVNIAELTVAMRLYERLLADYRNYEFAGKIGIIT 1731
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY+GQ L ++ + I+ +E + DAFQGRE ++II SCVR++D +GIGFL+
Sbjct: 1732 PYKGQLREL--KSRFAAKYGSSIFTTVEFNTTDAFQGRECEVIIFSCVRASD-RGIGFLS 1788
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
D RR+NV LTRAK + V+GN + L + W L++ +E+++ EG
Sbjct: 1789 DIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEG 1835
>gi|326488401|dbj|BAJ93869.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 216/408 (52%), Gaps = 54/408 (13%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ H+ ++
Sbjct: 384 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKA-------------HHSVK 430
Query: 601 NMEMNSEL-KKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ M+ + +K + + G + + R R SLLD A ++ T +G
Sbjct: 431 AVSMDYLMDQKQSGVASDGGRPGAGERDRLR-------ASLLDEAAIVFSTLSFSGSAIF 483
Query: 660 LKI--KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
++ F ++IDE+ QA EP +VP++ G +Q+ LVGD QL V+ A + G +S
Sbjct: 484 TRMTRAFDVVIIDEAAQAIEPATLVPLVHGCRQVFLVGDPVQLPATVISTTARKLGYGRS 543
Query: 718 LFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
LF+R G L++QYRMHPE+S FPS FYEG L++G D+++ PW
Sbjct: 544 LFQRFQAAGFPVQMLKIQYRMHPEISVFPSKEFYEGILEDGEGLDKKR------PWHSYS 597
Query: 778 --KPMLFYVTQGQE-EIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PE-----QIGVIT 828
P F+ G E ++GSG S VN E VE IT + + + PE Q+ VI+
Sbjct: 598 CFGPFCFFDVDGVESHLSGSG-SMVNEDE---VEFITLLYHQLATRYPELKSSSQVAVIS 653
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY GQ L H ++ + + + I+V +VD FQGREK+L+I SCVR N Q IGF++
Sbjct: 654 PYRGQVKLLTDH--FRSTFGDQSKEVIDVNTVDGFQGREKELVIFSCVRCNKEQSIGFVS 711
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
D RR+NVA+TRA+ ++VIG+ K W NL+ KE+ + P
Sbjct: 712 DFRRMNVAITRARSAVLVIGSSSTFKKDKHWTNLVESAKERNRYFKVP 759
>gi|299147977|ref|ZP_07041040.1| putative DNA helicase [Bacteroides sp. 3_1_23]
gi|298514160|gb|EFI38046.1| putative DNA helicase [Bacteroides sp. 3_1_23]
Length = 649
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 235/465 (50%), Gaps = 39/465 (8%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 199 FRELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHRE 253
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFL 593
VLVCA SN AVD + EK+ G+ V+R+ +R E+ +
Sbjct: 254 PQ-VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELW 312
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTC 651
+ IR EM S +++ E G + R R L+ L D+A VI T
Sbjct: 313 GIRKSIR--EMGSRMRRG-SYSEREGMRNRISHLRDRATELEIQINADLFDSARVIASTL 369
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C +AAR
Sbjct: 370 VSSNHRLLNGRRFSTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKCIEAAR 428
Query: 712 AGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
GL +L E++V L L +VQYRMH + +FPS++FY G L+ R + D
Sbjct: 429 GGLDHTLMEKVVQLKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRGILDFD 488
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPEQI-- 824
P D + + E+ G +N+ EA+ +E R + + E+I
Sbjct: 489 TPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELEAYIERIGKERILDERIDF 544
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+I+PY+ Q +L ++ S I V +VD FQG+E+D+I +S VR+N+ I
Sbjct: 545 GLISPYKAQVQYLRGKIK-GNSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDGQI 603
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
GFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 604 GFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKE 648
>gi|242780461|ref|XP_002479600.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218719747|gb|EED19166.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 713
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 251/489 (51%), Gaps = 71/489 (14%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ + ++LI GPPGTGKT T ++ Q++++ +LVC PSN++V
Sbjct: 228 PTLNHSQKEAIRFALASKEIALIHGPPGTGKTHTLIELILQMIRRN-MRILVCGPSNVSV 286
Query: 562 DQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNM-----EMNSELK 609
D + E++ + +VRV +R +D + L ++ +R++ E + ++
Sbjct: 287 DNIVERLAPHRVPIVRVGHPARLLSSVLDHSLEVLTQTSEAAEIVRDVRKEIDEKQASIR 346
Query: 610 KLLQLKEET---GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
K +E G+L K +R + + L+ + V+ T GAG RL KF
Sbjct: 347 KTRNGRERREIYGDLKEL-RKEFRERESKCVEDLVTGSKVVLATLHGAGGHRLKNQKFDV 405
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM-----------------CKKA 709
++IDE+ QA E +C +P +L A + +L GDH QL P + +K+
Sbjct: 406 VIIDEASQALEAQCWIP-LLTASRAVLAGDHLQLPPTIKSSNIDSSKKTSKTKVKEAEKS 464
Query: 710 AR------AGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
+ L Q++F+RL+ L + L QYRMH ++ +FPSN YEG L
Sbjct: 465 SSLDSLQGVSLGQTMFDRLLALHGPSIKRMLTTQYRMHEKIMQFPSNEMYEGKLIAADSV 524
Query: 762 DERKLSKIDFPWPVPD-----KPMLFYVTQG-------QEEIAGSGTSYVNRTEASNVE- 808
+R L D P+ V D +P++F TQG ++E A ++ ++++ +E
Sbjct: 525 KDRLLK--DLPYGVEDTDDTKEPLVFIDTQGGDFPEKAEDEDATIKGGLLSESKSNEMEA 582
Query: 809 KITTR----FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
++ R I G++PE I VITPY Q A + Q ++ + Y IE+ SVD FQ
Sbjct: 583 RVAIRHVEGLIDAGVRPEDIAVITPYNAQVALIAQCLREK-------YPGIEIGSVDGFQ 635
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLL 923
GREK+ I++S VRSN+ +GFL + RRLNVA+TR K + V G+ + +SK N +
Sbjct: 636 GREKEAIVVSLVRSNEKHEVGFLGEKRRLNVAMTRPKRHLCVCGDSETISKGSKFLKNWI 695
Query: 924 NFYKEQKVL 932
F +E L
Sbjct: 696 GFLEEHADL 704
>gi|282859892|ref|ZP_06268980.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|424899896|ref|ZP_18323438.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
gi|282587295|gb|EFB92512.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|388592096|gb|EIM32335.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
Length = 637
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 244/469 (52%), Gaps = 63/469 (13%)
Query: 497 FSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+A LP LN +Q AV + + ++++ GPPGTGKT T + + + + VLVCA
Sbjct: 186 FNALKLPWLNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRENQ-VLVCA 244
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+A+D ++EK+ G+ V+R+ +R D + F R E +S+ +L L+
Sbjct: 245 QSNMAIDWISEKLVDRGINVLRIGNPTR-VNDKMLGF----TYERRFEAHSDYPQLWSLR 299
Query: 616 EETGELSSADEKRYRMLKKNAEK-----------------SLLDNADVICCTCVGAGDPR 658
+ +L S R R L++ EK L A V+ CT V A
Sbjct: 300 KAIRQLRS---NRKRGLERFHEKLDRLKSRATELEIRINSELFSEARVVACTLVSANSRI 356
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
+ KF ++ IDE+ QA E C +P I A +++ GDHCQL P + A RAGL ++L
Sbjct: 357 MEGQKFDTLFIDEAAQALEAACWIP-IRRASRVVFAGDHCQLPPTIKNIAAMRAGLGKTL 415
Query: 719 FERLV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
ER+V V+ + L+VQYRM+ E+ +F S++FY G +++ R S +D+
Sbjct: 416 MERIVENKPEVVTL----LKVQYRMNEEIMRFSSDWFYHGEVES--APQIRYRSILDY-- 467
Query: 774 PVPDKPMLFYVTQG----------QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK-- 820
D PML+ T +EE G +N+ EA + + F + G +
Sbjct: 468 ---DHPMLWLDTSKVDIGDDEVSFKEEFVGESFGRINKGEAELTLNSLQEYFTKIGKQRI 524
Query: 821 ---PEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCV 876
+GVI+PY Q +L + ++ + K Y+ I V +VD FQG+E+D+I++S V
Sbjct: 525 LDESIDVGVISPYRAQVQYLRKLIRKRKFF--KPYRHLITVNTVDGFQGQERDVILISMV 582
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
R+ND IGFL D RR+NVA+TRA+ +I++GN + ++K P + L +
Sbjct: 583 RANDEGQIGFLKDLRRMNVAITRARMKLIILGNAETMTKHPFYAKLYEY 631
>gi|313148991|ref|ZP_07811184.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424664802|ref|ZP_18101838.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW
616]
gi|313137758|gb|EFR55118.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404575335|gb|EKA80078.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW
616]
Length = 656
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 236/459 (51%), Gaps = 56/459 (12%)
Query: 502 LPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV ++ + ++++ GPPGTGKT T VY+ + + VLVCA SN A
Sbjct: 211 FPWLNTTQEEAVNKVLRAKDVAIVHGPPGTGKTTTLVEAVYETLHRENQ-VLVCAQSNTA 269
Query: 561 VDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLALHNQIRNM---- 602
VD + EK+ G+ V+R+ SR E+ + + IR+M
Sbjct: 270 VDWIAEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFESHPAYTELWGIRKSIRDMGHHM 329
Query: 603 ------EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
E S ++L+LKE EL + L +A VI T V +
Sbjct: 330 RKGGYSERESTRNRILRLKERATELEIL-----------INEDLFSSARVIASTLVSSNH 378
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
L F S+ IDE+ QA E C + I A ++IL GDHCQL P + C +AAR+GL +
Sbjct: 379 RILTGRHFSSLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKCMEAARSGLDR 437
Query: 717 SLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP--W 773
+L E++V+ L ++QYRMH + +FPS +FY+G L+ R + ++D P W
Sbjct: 438 TLMEKVVMNKQEAVSLLKIQYRMHRSIMQFPSAWFYQGELEAAPEISHRGILELDTPINW 497
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR------CGMKPEQIGVI 827
+ M F+ EE G +N+ EA+ + + +IR + G+I
Sbjct: 498 -IDTSEMDFH-----EEFVGESFGRINKPEANLLLQELENYIRKIGENRVAEECIDFGLI 551
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+PY+ Q +L ++ G+ + Y+ I V +VD FQG+E+D+I +S VR+N++ IGF
Sbjct: 552 SPYKAQVQYLRNKIK--GNPFFRPYRSRITVNTVDGFQGQERDVIFISLVRANENGQIGF 609
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
LND RR+NVA+TRA+ ++++G+ +SK + L+ +
Sbjct: 610 LNDLRRMNVAITRARMKLVILGDATTMSKHAFYRKLIEY 648
>gi|440634913|gb|ELR04832.1| DNA helicase [Geomyces destructans 20631-21]
Length = 674
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 166/458 (36%), Positives = 242/458 (52%), Gaps = 60/458 (13%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A+K A+ R ++LI GPPGTGKT T ++ QLVK VLVC PSNI+VD
Sbjct: 201 LNDSQKDAIKFALASREVALIHGPPGTGKTHTLIELILQLVKLK-LRVLVCGPSNISVDN 259
Query: 564 LTEKIHRTGLKVVRVCAKSR---EAIDSPVSFL-------ALHNQIRNMEMNSE---LKK 610
+ E++ L ++R+ +R ++ + L A+ +R EM+S+ L+K
Sbjct: 260 IVERLSPHKLPILRLGHPARLLPSVLNHSLDILTQTSDAAAIVRDVRK-EMDSKQASLRK 318
Query: 611 LLQLKEETGELSSADE--KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
+E G E K +R +K +L+ + V+ T GAG +L +F +L
Sbjct: 319 TKSGRERRGIYGELRELRKEFREREKKCVANLVMGSKVVLATLHGAGGFQLRGEQFDVVL 378
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPV-------VMCKKAARAG--LSQSLF 719
IDE+ QA E +C VP +L A +++L GDH QL P V K+ G L +LF
Sbjct: 379 IDEASQALEAQCWVP-LLQADKVVLAGDHLQLPPTIKSLNSKVKSKEVIIKGMTLETTLF 437
Query: 720 ERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+RL+ + GI+ L QYRMH + +FPS+ YEG L R L+ D P+ V
Sbjct: 438 DRLLAMHGEGIKRM-LTTQYRMHETIMRFPSDELYEGKLIAAEAVKARLLT--DLPYEVQ 494
Query: 777 D-----KPMLFYVTQG-------QEE----IAGSGT---SYVNRTEASNVEKITTRFIRC 817
D +P++F+ TQG +EE AG G S N EA V+ ++
Sbjct: 495 DTEDTREPLVFWDTQGGDFPEASEEEGVSKKAGKGLMGESKSNEMEAVLVKLHVKNLVKA 554
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+KPE I V+TPY Q A + ++ + + IE+ SVD FQGREK+ II+S VR
Sbjct: 555 GVKPEDIAVVTPYNAQLALMSGPLKEE-------FPGIELGSVDGFQGREKEAIIVSLVR 607
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
SN +GFL + RRLNVA+TR + + VIG+ + ++K
Sbjct: 608 SNGDGEVGFLGEKRRLNVAMTRPRRHLCVIGDAETVAK 645
>gi|326507228|dbj|BAJ95691.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 980
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 241/462 (52%), Gaps = 50/462 (10%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
D ++SQ ++ +RP+ +IQGPPGTGKT + ++ V+Q G VLV APSN AVD
Sbjct: 505 DASQSQAISLGLNKKRPVLVIQGPPGTGKTGLLSYLIDCAVQQ-GERVLVTAPSNAAVDN 563
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI-RNMEM--------NSELKKLLQL 614
+ EK+ TGL +VRV +R I VS +L + R +E S L+K L+
Sbjct: 564 MVEKLSGTGLNIVRVGNPAR--ISPSVSSRSLGELVKRRLEKFTQEFQRKKSNLRKDLKQ 621
Query: 615 KEETGELSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKFHS- 666
+ L+S + + L KN K +L NADV+ T +GA DP + +I F
Sbjct: 622 CLQDDSLASGIRQLLKKLGKNFRKKENEIIKEVLSNADVVLSTNIGAADPLIKEIGFFDL 681
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG 726
++IDE+ QA EP C +P++ G K+ IL GD QL PV++ ++A + GL SL ER L
Sbjct: 682 VIIDEAGQAIEPSCWIPILRG-KRCILAGDQHQLAPVILSREAMQGGLGMSLLERASSLH 740
Query: 727 --IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP-----WPVPDKP 779
+ +L +QYRMH ++ + SN Y G L++ R L +D+P W +
Sbjct: 741 DELLTTKLTMQYRMHESIANWASNEMYFGLLKSSPSVASRLL--VDYPSIQETW-ITRCA 797
Query: 780 MLFYVT-----------QGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVIT 828
+L T + ++AG+G S+ N EA V + + CG+ P I V +
Sbjct: 798 LLLLDTRMPYGSLNIDCEENLDLAGTG-SFYNSGEADIVAQHVVNLVLCGVSPTSIAVQS 856
Query: 829 PYEGQRAFLVQHMQ-YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
PY Q L ++ Y +L +EV+++D+FQGRE D +++S VRSN +GFL
Sbjct: 857 PYIAQVQLLRDRLEEYPEAL------GVEVSTIDSFQGREADAVVISMVRSNSLGAVGFL 910
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
D RR+NVA+TRA+ + ++ + + LL ++
Sbjct: 911 GDNRRMNVAITRARRHVALVCDSFTICNNEFLARLLRHIRQH 952
>gi|392587391|gb|EIW76725.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1113
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 159/481 (33%), Positives = 239/481 (49%), Gaps = 68/481 (14%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKT--VTSATIVYQLVKQTGSPVLVCAPS 557
P LN +Q+ A+ + +SL+QGPPGTGKT + A + ++ + P+LV +
Sbjct: 578 PVFDGLNATQIRAIAMMVGEKISLVQGPPGTGKTKTIIEAVKLLKVEFEVPQPILVATYT 637
Query: 558 NIAVDQLTEKIHRTGLKVVRV------------C---AKSREAIDSPVSFLALHNQIRNM 602
N+AVD L E + + GLK +RV C AK + PV L Q R
Sbjct: 638 NVAVDNLVEGLLKAGLKPLRVGFGGKVNASLHDCTLDAKMEKHRHKPVVDKLLAEQERIN 697
Query: 603 EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL--------------------- 641
+ +EL K +L+E + D R + + +N +L+
Sbjct: 698 QHIAELNK--RLRERQRDPKIRDNARNQAIIENLRNALVVSERRLGIVRGKLHVLHNDML 755
Query: 642 ----DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
ADVIC TC+ + + L I F + +DE+ +TEP ++P++ G++ + L+GDH
Sbjct: 756 RDITAQADVICTTCISSVNSALSVIDFPVVFLDEASMSTEPASLIPLMRGSQHVALIGDH 815
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQ 756
QL PV++ +A GL SLFERL G+ P L+VQYRMHP LS FPS FY SLQ
Sbjct: 816 KQLPPVIVSYEADLKGLGISLFERLTEEGVVPSIMLDVQYRMHPALSYFPSLEFYNLSLQ 875
Query: 757 NGVCADERKLSKIDFP-----WPVPD----KPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
+G +S + P PV + +P + ++ E S VN EA+ V
Sbjct: 876 DGTVDSGGNVSPLLLPPLSAHLPVDESTGNRPSIVFMDHAGSETL-KDRSRVNYDEANIV 934
Query: 808 EKITTRFIRCG--MKPEQIGVITPYEGQRAFLVQHM--------QYQGSLPAKIYQE--- 854
I + M+ + IG+I PY Q + L + + ++ +L + +E
Sbjct: 935 CSIIEDLLLRNEHMRGDDIGIIAPYAAQISLLTRLLNTDAKYARRFAATLGDRRVRELSK 994
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
+EV +VD F+GR+KD+II S VR+N +GFL D RRLNV LTRAK G+ V+G+ L
Sbjct: 995 VEVRTVDGFEGRQKDVIIFSTVRNNPAGHVGFLADRRRLNVGLTRAKRGLFVVGSISTLK 1054
Query: 915 K 915
+
Sbjct: 1055 Q 1055
>gi|449451781|ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 957
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 237/463 (51%), Gaps = 54/463 (11%)
Query: 504 DLNRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
D + SQ A+ A+ +RP+ +IQGPPGTGKT ++ V+Q G VLV AP+N AV
Sbjct: 482 DFDDSQKSAISRALNKKRPILIIQGPPGTGKTGLLKELIALAVQQ-GERVLVTAPTNAAV 540
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS----------ELKKL 611
D + EK+ G+ +VRV +R I S V+ +L +I N E++S +L+K
Sbjct: 541 DNMVEKLSNIGINIVRVGNPAR--ISSSVASKSLA-EIVNSELSSFRTDIERKKADLRKD 597
Query: 612 LQLKEETGELSSADEKRYRMLKKNAEKSL-----------LDNADVICCTCVGAGDPRLL 660
L+ + L++ R L K KSL L NA V+ T GA DP +
Sbjct: 598 LRQCLKDDSLAAG----IRQLLKQLGKSLKKKEKETVKEVLSNAQVVLATNTGAADPLIR 653
Query: 661 KI-KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
K+ KF ++IDE+ QA EP C +P++ G ++ IL GD CQL PV++ +KA GL SL
Sbjct: 654 KLEKFDLVVIDEAGQAIEPACWIPILQG-RRCILAGDQCQLAPVILSRKALEGGLGVSLL 712
Query: 720 ERLVVL--GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP--V 775
ER L G L +QYRM+ ++ + S Y+G L++ L F P +
Sbjct: 713 ERAATLHEGALTTMLTIQYRMNDAIASWASKEMYDGILESSPTVSSHLLVNSPFVKPTWI 772
Query: 776 PDKPMLFYVTQ--------GQEE---IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
P+L T+ G EE AG+G+ Y N EA V + I G+ P I
Sbjct: 773 TQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSLY-NEGEADIVVQHVCSLIYSGVSPRAI 831
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
V +PY Q L + +P IEVA++D+FQGRE D +I+S VRSN+ +
Sbjct: 832 AVQSPYVAQVQLLRNRLD---EIPES--AGIEVATIDSFQGREADAVIISMVRSNNLGAV 886
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
GFL D RR+NVA+TRA+ + ++ + + + LL +
Sbjct: 887 GFLGDSRRMNVAITRARKHVALVCDSSTICQNTFLARLLRHIR 929
>gi|340346996|ref|ZP_08670112.1| DNA helicase [Prevotella dentalis DSM 3688]
gi|433652214|ref|YP_007278593.1| hypothetical protein Prede_1241 [Prevotella dentalis DSM 3688]
gi|339610499|gb|EGQ15349.1| DNA helicase [Prevotella dentalis DSM 3688]
gi|433302747|gb|AGB28563.1| hypothetical protein Prede_1241 [Prevotella dentalis DSM 3688]
Length = 675
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 267/551 (48%), Gaps = 88/551 (15%)
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH 496
T AT V + TS+ M AL + + AY+ LF H+P
Sbjct: 148 TSATMPLGVQLSFDETSYRAMFSALDRVIKAKGNRMAYLRD----------LFYSHIPAQ 197
Query: 497 ---FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
F+ + P LN +Q AV ++ + + ++ GPPGTGKT T + + + + S VL
Sbjct: 198 RFTFAPMSFPWLNVTQERAVNEVLRAKDVEVVHGPPGTGKTTTLVEAINETLMRE-SQVL 256
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLALHNQ 598
VCA SN+AVD ++EK+ G+ V+R+ +R EA A+
Sbjct: 257 VCAQSNMAVDWISEKLVDRGINVLRIGNPTRVNDKMLGFTYERRFEAHPDYPQLWAIRKA 316
Query: 599 IRNMEMN------SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
IR + S +K+ +LK EL ++ NAE L A VI T V
Sbjct: 317 IRELRKKRKGRDESYHQKMERLKSRATELE---------IRINAE--LFGEARVIASTLV 365
Query: 653 GAGDPRLLK-IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
GA D RLL+ KF ++ IDE+ QA E C +P I +++L GDHCQL P V A +
Sbjct: 366 GA-DSRLLEGQKFSTLFIDEAAQALEAACWIP-IRRVSRVVLAGDHCQLPPTVKSIAAMK 423
Query: 712 AGLSQSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
AGL ++L ER+V +P L+VQYRM E+ F S +FY G ++ A R +
Sbjct: 424 AGLGKTLMERIVEQ--KPECVTLLQVQYRMREEIMHFSSEWFYGGRVETAPQAKHRGILD 481
Query: 769 IDFPWP-----------------VPDKPM--------LFYVTQGQEEIAGSGTSYVNRTE 803
++ P+ VP K + L + E+ G VNR E
Sbjct: 482 LENPFTWIDTAPPQLSPAGEVEQVPHKNIGDSLLPEGLGKASDFSEQFVGESYGRVNRGE 541
Query: 804 AS-NVEKITTRFIRCGMK---PEQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IE 856
A ++ + F++ G + E+I GVI+PY Q +L Q ++ + K Y+ I
Sbjct: 542 AFLTLDALQDYFVKIGRQRILDEKIDVGVISPYRAQVQYLRQLIKRREFF--KPYRHLIS 599
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
V +VD FQG+E+D+I++S VR+ND IGFL D RR+NVA+TRA+ +I++GN L++
Sbjct: 600 VNTVDGFQGQERDIILVSMVRANDQGQIGFLCDLRRMNVAITRARMKLIILGNAPTLTRH 659
Query: 917 PLWNNLLNFYK 927
P + L + K
Sbjct: 660 PFYKRLYTYAK 670
>gi|294655237|ref|XP_002770105.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
gi|199429794|emb|CAR65475.1| DEHA2B08822p [Debaryomyces hansenii CBS767]
Length = 1968
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 266/547 (48%), Gaps = 107/547 (19%)
Query: 501 NLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQ------------ 546
+L D+NRSQ A+ + SLIQGPPGTGKT T IV Y + Q
Sbjct: 1305 SLYDVNRSQAKAIMGSYNSDGFSLIQGPPGTGKTKTILGIVGYSISHQQKEGTIIIPKGI 1364
Query: 547 -------------TGSPVLVCAPSNIAVDQLTEKIHRTGLK-------VVRVCAKSR-EA 585
G +L+CAPSN AVD+L ++ R G+K + RV R +A
Sbjct: 1365 ADNNPLAGSKGESNGPKILICAPSNAAVDELVLRL-RKGVKTSKGESIIPRVVRLGRSDA 1423
Query: 586 IDSPVSFLAL-----------------------------------HNQIRNMEMNSELKK 610
I++ V L L ++R +N E K
Sbjct: 1424 INAAVKDLTLEELVDKQLQVQSVNTTSDPKIRMEHTKCIAERDRLREELRKPNLNEEEIK 1483
Query: 611 LLQLK-----EETGELSSA-DEKRYRML---------KKNAEKSLLDNADVICCTCVGAG 655
+L+++ + EL+ DE+R R+ ++ + +L+++ +IC T G+
Sbjct: 1484 VLEIQLRDTNKSRNELAKKLDEQRERISIAYRTKEIERRQLQAKILNSSQIICSTLSGSA 1543
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L + +KF ++IDE+ Q+ E ++P+ G K+ I+VGD QL P V+ + AA
Sbjct: 1544 HDFLANMSMKFDQVIIDEACQSVELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASFN 1603
Query: 714 LSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ + + L+VQYRMHP +SKFPS+ FY L +G E +K P
Sbjct: 1604 YEQSLFVRMQKMYPESVYLLDVQYRMHPAISKFPSSEFYFSRLHDG----EGMAAKNSRP 1659
Query: 773 W--PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVI 827
W P P +F+ G+ + S N EA ++ + I+ + E +IG+I
Sbjct: 1660 WHKDYPLSPYMFFDIVGKHQQNELSRSLFNYAEAQVALELVDKLIQILPQTEFSGRIGII 1719
Query: 828 TPYEGQRAFL--VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
+PY+ Q L V +Y S I EI+ +VD FQG+EK++IIMSCVR+++ +G
Sbjct: 1720 SPYKEQIRTLKDVFKRKYGHS----ILSEIDFNTVDGFQGQEKEIIIMSCVRASESGNVG 1775
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLI 945
FL+D RR+NVALTRA+ + ++GN K LS+ +W LL+ E+ + E LK+
Sbjct: 1776 FLSDVRRMNVALTRARTSLWILGNKKSLSRNTVWKRLLDDAAERNAVSEAHPGFLKK--- 1832
Query: 946 LFSKPKQ 952
+F P Q
Sbjct: 1833 IFKLPPQ 1839
>gi|380696742|ref|ZP_09861601.1| helicase [Bacteroides faecis MAJ27]
Length = 652
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 173/564 (30%), Positives = 267/564 (47%), Gaps = 60/564 (10%)
Query: 398 LRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG--FSVDFIWKSTSFD 455
R S+D ++ + D +E + + AGA E T V + TS+
Sbjct: 111 FRQSFDGKVSYMNFIATVSYAD---EERMVVVLPGAGALMELQTEDVLGVQLYFDETSYR 167
Query: 456 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH 515
M AL + A + LLG + FR P F P LN +Q AV
Sbjct: 168 AMFEALEDTIRAKGNRLADLRDTLLG--TQKPGFRELYPVRF-----PWLNSTQETAVNK 220
Query: 516 AI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+ R ++++ GPPGTGKT T +Y+ + + VLVCA SN AVD + EK+ G+
Sbjct: 221 VLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQ-VLVCAQSNTAVDWICEKLADRGVA 279
Query: 575 VVRVCAKSR--------------EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
V+R+ +R E+ + + IR EM S +++ G
Sbjct: 280 VLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGIRKSIR--EMGSRMRR--------GS 329
Query: 621 LSSADEKRYRM--LKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKFHSILIDE 671
S + R RM L+ A + L D+A VI T V + L +F ++ IDE
Sbjct: 330 YSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTLVSSNHRLLNGRRFPTLFIDE 389
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
+ QA E C + I A ++IL GDHCQL P + C +AAR GL +L E++V
Sbjct: 390 AAQALEAACWI-AIRKADRVILAGDHCQLPPTIKCIEAARGGLDHTLMEKVVQQKPSAVS 448
Query: 732 L-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE 790
L +VQYRMH + +FPS +FY G L+ R + D P D + + EE
Sbjct: 449 LLKVQYRMHEAIMRFPSEWFYNGELEAAPEVRNRGILDFDTPMNWIDTSEMDF----HEE 504
Query: 791 IAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQHMQYQ 844
G +N+ EA+ +E R + + E+I G+I+PY+ Q +L ++
Sbjct: 505 FVGESFGRINKQEANLLLQELEAYINRIGKTRILDERIDFGLISPYKAQVQYLRSKIR-G 563
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
S I V +VD FQG+E+D+I +S VR+N+ IGFLND RR+NVA+TRA+ +
Sbjct: 564 NSFLRPFRSLITVNTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVAITRARMKL 623
Query: 905 IVIGNPKVLSKQPLWNNLLNFYKE 928
+++G+ L++ P + L+ + ++
Sbjct: 624 VILGDATTLAQHPFYRKLMQYIRQ 647
>gi|383112071|ref|ZP_09932871.1| hypothetical protein BSGG_3732 [Bacteroides sp. D2]
gi|382949144|gb|EFS33032.2| hypothetical protein BSGG_3732 [Bacteroides sp. D2]
Length = 645
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 259/531 (48%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 139 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 196
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 197 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 251
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 252 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 310
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 311 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSHLRDRATELEIQINADLFDSARV 360
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 361 IASTLVSSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 419
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+AAR GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 420 IEAARGGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRG 479
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKP 821
+ D P D + + E+ G +N+ EA+ +E R + +
Sbjct: 480 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELEAYIERIGKERILD 535
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 536 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 593
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 594 NEDGQIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKE 644
>gi|442323516|ref|YP_007363537.1| DNA helicase [Myxococcus stipitatus DSM 14675]
gi|441491158|gb|AGC47853.1| DNA helicase [Myxococcus stipitatus DSM 14675]
Length = 637
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 246/515 (47%), Gaps = 53/515 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+D + +++RM+ L++ D+ + LLG+ R P+ F P
Sbjct: 125 LRLDVVPNDVTYERMRTGLQRVKAMDKGLERRKREVLLGNEPP----RTDKPRDFE-PGR 179
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN Q+ AV A+ L+ GPPGTGK+ A + Q V + G +L A SN AV
Sbjct: 180 P-LNPEQLDAVGRALAAEDFFLVHGPPGTGKSTVLAEVAAQAVAR-GQRLLCTAASNAAV 237
Query: 562 DQLTEKIHRTGLKVVRV------CAK------------------SREAIDSPVSFLALHN 597
D L + GL+ VRV A+ SRE D S L
Sbjct: 238 DHLLDLCLGQGLRAVRVGHPARVAARLQEHTLDIVVEEHPDRVVSRELFDEAFSLLGYAR 297
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSA-DEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
+ R + + + T E + DE R L++ A +S+L ADV+C T
Sbjct: 298 RQRTQGRSR--ARFSNARASTTEAKAMLDEAR--ALERKAVRSVLATADVVCVTLASLDS 353
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
L +F L+DE+ QATEP ++ L A +IL GD QL P V+ + AARAGL+
Sbjct: 354 GVLSGEQFDLALLDEATQATEPLALLG-FLRAPIVILAGDPQQLPPTVLSQDAARAGLAV 412
Query: 717 SLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
SLFERL+ G++ LE QYRM+ + FPS Y G L+ +R L+ + P
Sbjct: 413 SLFERLLADHGDGVKRMLLE-QYRMNTRIMDFPSREMYGGQLRAHPSVADRTLADVLPPG 471
Query: 774 PVPDKP-MLFYVTQGQ---EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
D P +LF T G+ EE+ + S N EA +E + G+ ++ VITP
Sbjct: 472 TEVDAPPVLFLDTAGKGFDEEVEPTTRSLFNTGEADLIEARVRALLALGLSQRELAVITP 531
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q L + ++ ++EV ++DAFQGREKD +++S RSN +GFLND
Sbjct: 532 YSAQAHRLRERLE-------SFAPDVEVDTMDAFQGREKDAVLVSLTRSNSEGQVGFLND 584
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
RR+NVALTRA+ + V+G+ LS P + +
Sbjct: 585 LRRMNVALTRARRHLFVVGDSATLSGHPFYARFIE 619
>gi|414884936|tpg|DAA60950.1| TPA: hypothetical protein ZEAMMB73_755312 [Zea mays]
Length = 737
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 239/462 (51%), Gaps = 48/462 (10%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
D ++S+ A+ +RP+ +IQGPPGTGKT + +V ++V++ G VLV APSN AVD
Sbjct: 264 DTSQSRALALALDKERPVLVIQGPPGTGKTRLLSYLVARVVRR-GERVLVTAPSNAAVDN 322
Query: 564 LTEKIHRTGLK-VVRVCAKSREAID-SPVSF----------LALHNQIRNMEMNSELKKL 611
+ E + +GLK +VRV SR + +P+S L + R + +LK+
Sbjct: 323 MAESLSASGLKNIVRVGNPSRISPSVAPMSLGQIVATRLEKLTREFETRRSALRKDLKRR 382
Query: 612 LQLKEETGELSSADE------KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-- 663
+Q + G+ SS + K YR KK A + +L NA+V+ T GA DP +
Sbjct: 383 VQ---DGGDGSSVRQQLKRLGKDYRKEKKEAVREVLANAEVVLSTNTGAADPLVRGTGGC 439
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA EP C +P++ G K+ IL GDH QL PVV+ ++A GL SL ER
Sbjct: 440 FDLVIIDEAGQAIEPSCWIPMLQG-KRCILAGDHRQLAPVVLSREAMEGGLGMSLLERAS 498
Query: 724 VL--GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP-----WPVP 776
L G+ L QYRMH ++ + S Y+G L++ R L +++P W
Sbjct: 499 SLHDGLLATTLTTQYRMHESIASWASKEMYDGLLRSFPSVASRLL--VNYPSVKVTWMTQ 556
Query: 777 DKPMLFYVTQG--------QEEIAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVI 827
+L + +E + +GT S+ N EA V ++CG+ P I V
Sbjct: 557 CALLLLDTRRAYGSLNIDCEESLDPAGTGSFYNNGEADIVAHHVLNLVQCGVPPTSIVVQ 616
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+PY Q L +Q P ++EV+++D+FQGRE D +++S VRSN +GFL
Sbjct: 617 SPYIAQVQLLQDRLQ---EYPMAF--DVEVSTIDSFQGREADAVVISMVRSNSMGEVGFL 671
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
D RR+NVA+TRAK + V+ + + LL ++
Sbjct: 672 ADRRRMNVAITRAKSHVAVVCDTSTICNNAFLARLLLHIRQH 713
>gi|156838553|ref|XP_001642980.1| hypothetical protein Kpol_1046p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156113564|gb|EDO15122.1| hypothetical protein Kpol_1046p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 1115
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 249/463 (53%), Gaps = 67/463 (14%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVD 562
+LN SQ A++H + ++++QGPPGTGKT T I+ Q+++ S P+L A SNIA+D
Sbjct: 640 NLNESQRSAIQHVLNNHITVLQGPPGTGKTSTIEEIIIQMIENFHSFPILCVAASNIAID 699
Query: 563 QLTEK--IHRTGLKVVRVCAKSRE---AIDSPVSFLALHNQIRNMEMNSELKKLLQLKEE 617
+ EK ++R +K++R+ ++ +E + P+ + LHN I N ++ ++K+ L+ K
Sbjct: 700 NIAEKFLLNRPNIKILRIVSEGKEPQYGPNHPLGKICLHN-IVNEQLPDQMKQNLR-KLR 757
Query: 618 TGELSSADEKRYRML---KKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESM 673
+G ++ + + L + + A +I T + AG +L IK +++DES
Sbjct: 758 SGRINDISKNQINKLSTQQTTIADRYVSQAQIIFTTNIAAGGRQLKSIKELPVVIMDEST 817
Query: 674 QATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPF 730
Q++E +VP+ L G + + VGD QL + L SLFER+++ G +P
Sbjct: 818 QSSEAATLVPLSLPGLRTFVFVGDEKQLSSFSNVPQ-----LEMSLFERVLLNGSYKKPH 872
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQE 789
L+ QYRMHP +SKFP FY G L++GV +++ I + P+ FY +G+E
Sbjct: 873 MLDTQYRMHPSISKFPIKAFYNGELKDGVTIKDKEFPGIKY-------PLFFYNCNKGRE 925
Query: 790 -----EIAGS-GTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLVQHMQ 842
++ GS G +Y N +EA + KI + I ++ ++IG+ITPY QR L +
Sbjct: 926 GKVFNKVRGSAGFTYNNISEAREIVKILYKLILDKNVQRDEIGIITPYSAQRDLLSNLLV 985
Query: 843 YQGSL-PAKI-----YQEIE--------------------------VASVDAFQGREKDL 870
+ P K+ + EI+ V+++D+FQG EK
Sbjct: 986 NDSVINPEKVEMFQDFDEIDLLNSKASGNTLEGPKVNTINIINGIFVSTIDSFQGHEKKF 1045
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
II SCVR+N IGF++D RR+NVALTRAK G+I++GN V+
Sbjct: 1046 IIFSCVRNNPENKIGFVSDKRRMNVALTRAKNGLIIVGNKDVM 1088
>gi|326474384|gb|EGD98393.1| tRNA-splicing endonuclease [Trichophyton tonsurans CBS 112818]
Length = 2188
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 258/528 (48%), Gaps = 105/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------KQTGSP------ 550
DLN +Q A+K A+ +LIQGPPG+GKT T IV L+ ++ P
Sbjct: 1310 DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERRVSQPKITSDS 1369
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGLK----------VVR------------ 577
+LVCAPSN AVD+L + + G+K V+R
Sbjct: 1370 AQANKSGPSKKLLVCAPSNAAVDELVMRF-KEGVKTLNGKTQPISVIRLGRSDAINANVL 1428
Query: 578 -------VCAK------------------SREAIDSPVSFLALHNQI-----RNMEMNSE 607
V AK E ++ F+ + +I R +++E
Sbjct: 1429 DVTLDELVNAKLNQSGQTKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRARVEPVSNE 1488
Query: 608 LKKLLQL-KEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A D R + + ++ ++ ++D A VIC T G+G
Sbjct: 1489 LEREFDLLKRKKAQLSQAIDNARDKNHAAARNAELTRRRIQQEIIDGAHVICSTLSGSGH 1548
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K+A+R
Sbjct: 1549 EMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQY 1608
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFP 772
QSLF R+ L+ QYRMHPE+SKFPS FY+G LQ+G A RK P
Sbjct: 1609 EQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKK-----P 1663
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVI 827
W + P F+ QG A G S +N E + ++ R + R +IG+I
Sbjct: 1664 WHGSELLGPYRFFDVQGMHSSAAKGHSLINIAELTVAMRLYERLLADYRNYDFAGKIGII 1723
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L ++ + I+ +E + DAFQGRE ++II SCVR++D +GIGFL
Sbjct: 1724 TPYKGQLREL--KSRFAAKYGSSIFTTVEFNTTDAFQGRECEVIIFSCVRASD-RGIGFL 1780
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+D RR+NV LTRAK + V+GN + L + W L++ +E+++ EG
Sbjct: 1781 SDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARERQLYTEG 1828
>gi|423278771|ref|ZP_17257685.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW
610]
gi|404585763|gb|EKA90367.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW
610]
Length = 656
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 236/459 (51%), Gaps = 56/459 (12%)
Query: 502 LPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV ++ + ++++ GPPGTGKT T VY+ + + VLVCA SN A
Sbjct: 211 FPWLNTTQEEAVNKVLRAKDVAIVHGPPGTGKTTTLVEAVYETLHRENQ-VLVCAQSNTA 269
Query: 561 VDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLALHNQIRNM---- 602
VD + EK+ G+ V+R+ SR E+ + + IR+M
Sbjct: 270 VDWIAEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFESHPAYTELWGIRKSIRDMGNHL 329
Query: 603 ------EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
E S ++L+LKE EL + L +A VI T V +
Sbjct: 330 RKGGYSERESTRNRILRLKERATELEIL-----------INEDLFSSARVIASTLVSSNH 378
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
L F ++ IDE+ QA E C + I A ++IL GDHCQL P + C +AAR+GL +
Sbjct: 379 RILTGRHFSTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKCMEAARSGLDR 437
Query: 717 SLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP--W 773
+L E++V+ L ++QYRMH + +FPS +FY+G L+ R + ++D P W
Sbjct: 438 TLMEKVVMNKQEAVSLLKIQYRMHRSIMQFPSAWFYQGELEAAPEISHRGILELDTPINW 497
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR------CGMKPEQIGVI 827
+ M F+ EE G +N+ EA+ + + +IR + G+I
Sbjct: 498 -IDTSEMDFH-----EEFVGESFGRINKPEANLLLQELENYIRKIGENRVAEECIDFGLI 551
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+PY+ Q +L ++ G+ + Y+ I V +VD FQG+E+D+I +S VR+N++ IGF
Sbjct: 552 SPYKAQVQYLRNKIK--GNPFFRPYRNRITVNTVDGFQGQERDVIFISLVRANENGQIGF 609
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
LND RR+NVA+TRA+ ++++G+ +SK + L+ +
Sbjct: 610 LNDLRRMNVAITRARMKLVILGDATTMSKHAFYRKLIEY 648
>gi|302499595|ref|XP_003011793.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
gi|291175346|gb|EFE31153.1| hypothetical protein ARB_02022 [Arthroderma benhamiae CBS 112371]
Length = 2117
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 257/528 (48%), Gaps = 105/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------------------ 544
DLN +Q A+K A+ +LIQGPPG+GKT T IV L+
Sbjct: 1303 DLNPAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERKVPQPKIASDS 1362
Query: 545 ----KQTGSP-VLVCAPSNIAVDQLTEKIHRTGLK----------VVR------------ 577
K T S +LVCAPSN AVD+L + + G+K V+R
Sbjct: 1363 AQASKSTPSKKLLVCAPSNAAVDELVMRF-KEGVKTLNGKTQPISVIRLGRSDAINANVL 1421
Query: 578 -------VCAK------------------SREAIDSPVSFLALHNQI-----RNMEMNSE 607
V AK E ++ F+ + +I R +++E
Sbjct: 1422 DVTLDELVNAKLNQSDQKKNGEERDLQSYFNEHKETSAKFIEIRQRIDQCRARAEPVSNE 1481
Query: 608 LKKLLQL-KEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A D R + + ++ ++ ++D A VIC T G+G
Sbjct: 1482 LEREFDLLKRKKAQLSQAIDNARDKNHAAARNAELTRRRIQQEIIDGAHVICSTLSGSGH 1541
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K+A+R
Sbjct: 1542 EMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQY 1601
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFP 772
QSLF R+ L+ QYRMHPE+SKFPS FY+G LQ+G A RK P
Sbjct: 1602 EQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKK-----P 1656
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVI 827
W + P F+ QG A G S VN E + ++ R + R +IG+I
Sbjct: 1657 WHGSELLGPYRFFDVQGMHSSAAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGII 1716
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L ++ + I+ +E + DAFQGRE ++II SCVR++D +GIGFL
Sbjct: 1717 TPYKGQLREL--KSRFAAKYGSSIFTAVEFNTTDAFQGRECEVIIFSCVRASD-RGIGFL 1773
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+D RR+NV LTRAK + V+GN + L + W L+ +E+++ EG
Sbjct: 1774 SDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIYDARERQLYTEG 1821
>gi|294930582|ref|XP_002779607.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239889004|gb|EER11402.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 151
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/147 (64%), Positives = 119/147 (80%)
Query: 637 EKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGD 696
E+ LL+NADVIC TC GAGDPRL K++F +L+DE+ QA EPE ++P+ GAKQ+ILVGD
Sbjct: 2 ERELLENADVICTTCAGAGDPRLGKLRFKMVLVDEATQACEPEALIPICNGAKQVILVGD 61
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQ 756
H QLGPVVMCKKAA+AG QSLFERL+ LG+RP RLEVQYRMHP L++FPS FY+G LQ
Sbjct: 62 HKQLGPVVMCKKAAKAGFKQSLFERLIALGVRPIRLEVQYRMHPSLAEFPSQTFYDGCLQ 121
Query: 757 NGVCADERKLSKIDFPWPVPDKPMLFY 783
NG+ ++R++S + FPWP + PM FY
Sbjct: 122 NGITMEDRQVSGVKFPWPREEMPMFFY 148
>gi|391871546|gb|EIT80706.1| DNA helicase [Aspergillus oryzae 3.042]
Length = 728
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 254/532 (47%), Gaps = 96/532 (18%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP-----NLPDLNR 507
++ RM+ + K +S + GH LP + A N P LN
Sbjct: 197 TYRRMRQTMEKMGKIIESDYTHFMRVAFGHTTP-------LPPDYGAVGDVEFNDPSLND 249
Query: 508 SQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTE 566
SQ A++ A+ R ++LI GPPGTGKT T ++ Q+V Q VLVC PSNI+VD + E
Sbjct: 250 SQKEAIRFALASRDIALIHGPPGTGKTHTLIELILQMV-QRKLRVLVCGPSNISVDNIVE 308
Query: 567 KIHRTGLKVVRVCAKSREAIDSPVSFL--ALHNQIRNMEMNSELKKLLQ--LKEETGELS 622
++ + VVR I P L L + + + S+ +++ KE +++
Sbjct: 309 RLAPKKVPVVR--------IGHPARLLPSVLEHSLEVLTHTSDAASIVRDVRKEIDQKVA 360
Query: 623 SADEKRYRMLKKNAEKSL--------------LDN----ADVICCTCVGAGDPRLLKIKF 664
S + R+ K+ + L +DN + V+ T GAG +L KF
Sbjct: 361 SIRKTRFGREKRAIYQDLKELRREFRERESKCVDNLVRESSVVLATLHGAGGHQLKNQKF 420
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC----KKAARAG------- 713
++IDE+ QA E +C + +L A +++L GDH QL P V K +AG
Sbjct: 421 DVVIIDEASQALEAQCWIS-LLSASKVVLAGDHLQLPPTVKSTDQKSKDVKAGKVDTVND 479
Query: 714 ----------LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
L ++F+RL+ L + L QYRMH + +FPS+ YE L G
Sbjct: 480 GDNGVLGKMSLETTMFDRLLSLHGESIKRMLTTQYRMHETIMRFPSDELYESKLMAGDAV 539
Query: 762 DERKLSKIDFPWPVPD-----KPMLFYVTQG-------------QEEIAGSGTSYVNRTE 803
R L D P+ V + +P++F+ TQG Q+E A G S N E
Sbjct: 540 KARLLK--DLPYDVEETDDTKEPLVFWDTQGGDFPEKTEDKEVGQKE-ALLGESKSNEME 596
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A V K ++ G+KPE I VITPY GQ A L Q ++ + Y IE+ SVD F
Sbjct: 597 AMVVAKHVDNLVQSGLKPEDIAVITPYNGQLAILSQMLREK-------YPGIELGSVDGF 649
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
QGREK+ +++S VRSN +GFL + RRLNVA+TR K + V G+ + +SK
Sbjct: 650 QGREKEAVVVSLVRSNSENEVGFLGEKRRLNVAMTRPKRHLCVCGDSETISK 701
>gi|254578954|ref|XP_002495463.1| ZYRO0B11968p [Zygosaccharomyces rouxii]
gi|238938353|emb|CAR26530.1| ZYRO0B11968p [Zygosaccharomyces rouxii]
Length = 1101
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 251/478 (52%), Gaps = 66/478 (13%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQ 563
N SQ A++H + ++++QGPPGTGKT T ++ Q+++ S P+L A SNIA+D
Sbjct: 633 FNESQKSAIQHVLNNSVTVLQGPPGTGKTSTIEELIIQMIRNFSSWPILCVAASNIAIDN 692
Query: 564 LTEKI--HRTGLKVVRVCAKSREA---IDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
+ EK ++ ++++R+ + S+E+ D P+ + LHN I N ++ +LK+ +Q K T
Sbjct: 693 IAEKFIDNKDSIRILRIVSDSKESQYNKDHPLGKICLHN-IVNDQLPPQLKE-VQHKLRT 750
Query: 619 GELSSADEKRYRMLKKNAEKSLLD----NADVICCTCVGAGDPRLLKIK-FHSILIDESM 673
G+ + +Y L A+ + D A ++ T + AG RL IK +++DES
Sbjct: 751 GKSHEVSKNQYNNL-STAQNQIADRYIMQAQILFTTTITAGGRRLKAIKELPVVIMDEST 809
Query: 674 QATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPF 730
Q++E +VP+ L G ++ + VGD QL + L SLFER+++ G P
Sbjct: 810 QSSEAATLVPLSLPGIRKFVFVGDEKQLSSFSQIPQ-----LEMSLFERVLLNGCYKNPH 864
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT---QG 787
L+ QYRMHP +S+FP FY G L++GV +++ I +P LF++
Sbjct: 865 MLDTQYRMHPIISEFPRQRFYGGLLKDGVTEEQKNWQSIKYP--------LFFLRCDLGD 916
Query: 788 QEEIAGS-----GTSYVNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQR----AFL 837
+ ++ S G +Y N+ E + ++ + I + +QIG++TPY QR L
Sbjct: 917 ETKVTNSHNGLRGYTYTNKHECQLLLQMVYKLILDKQVSRDQIGIVTPYSAQRDAISELL 976
Query: 838 VQH----------------------MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
VQ M I +I +A+VD+FQG EK+ I+ S
Sbjct: 977 VQDRIVNPQGLAMEQEIDEMDPFDAMAGSKKNSINIVNDIYIATVDSFQGHEKNFILFST 1036
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL-SKQPLWNNLLNFYKEQKVL 932
VR+N IGF+ND RR+NVALTRAK G+I++GN L + LW + +++ ++++
Sbjct: 1037 VRNNPLGKIGFVNDARRMNVALTRAKNGLILVGNDHTLRNGSDLWKDYIDYLNSRQLI 1094
>gi|336403156|ref|ZP_08583876.1| hypothetical protein HMPREF0127_01189 [Bacteroides sp. 1_1_30]
gi|335946894|gb|EGN08690.1| hypothetical protein HMPREF0127_01189 [Bacteroides sp. 1_1_30]
Length = 645
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 262/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 139 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 196
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 197 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 251
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 252 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 310
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 311 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 360
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 361 IASTLVSSNHRLLNGRRFSTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 419
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+R GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 420 IEASRGGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRG 479
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCG---MKP 821
+ D P D + + E+ G +N+ EA+ + +++ T R G +
Sbjct: 480 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKERILD 535
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 536 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 593
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 594 NEDGQIGFLNDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLFIKKE 644
>gi|169777529|ref|XP_001823230.1| DNA polymerase alpha-associated DNA helicase A [Aspergillus oryzae
RIB40]
gi|83771967|dbj|BAE62097.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 720
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 254/532 (47%), Gaps = 96/532 (18%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP-----NLPDLNR 507
++ RM+ + K +S + GH LP + A N P LN
Sbjct: 189 TYRRMRQTMEKMGKIIESDYTHFMRVAFGHTTP-------LPPDYGAVGDVEFNDPSLND 241
Query: 508 SQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTE 566
SQ A++ A+ R ++LI GPPGTGKT T ++ Q+V Q VLVC PSNI+VD + E
Sbjct: 242 SQKEAIRFALASRDIALIHGPPGTGKTHTLIELILQMV-QRKLRVLVCGPSNISVDNIVE 300
Query: 567 KIHRTGLKVVRVCAKSREAIDSPVSFL--ALHNQIRNMEMNSELKKLLQ--LKEETGELS 622
++ + VVR I P L L + + + S+ +++ KE +++
Sbjct: 301 RLAPKKVPVVR--------IGHPARLLPSVLEHSLEVLTHTSDAASIVRDVRKEIDQKVA 352
Query: 623 SADEKRYRMLKKNAEKSL--------------LDN----ADVICCTCVGAGDPRLLKIKF 664
S + R+ K+ + L +DN + V+ T GAG +L KF
Sbjct: 353 SIRKTRFGREKRAIYQDLKELRREFRERESKCVDNLVRESSVVLATLHGAGGHQLKNQKF 412
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC----KKAARAG------- 713
++IDE+ QA E +C + +L A +++L GDH QL P V K +AG
Sbjct: 413 DVVIIDEASQALEAQCWIS-LLSASKVVLAGDHLQLPPTVKSTDQKSKDVKAGKVDTVND 471
Query: 714 ----------LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
L ++F+RL+ L + L QYRMH + +FPS+ YE L G
Sbjct: 472 GDNGVLGKMSLETTMFDRLLSLHGESIKRMLTTQYRMHETIMRFPSDELYESKLMAGDAV 531
Query: 762 DERKLSKIDFPWPVPD-----KPMLFYVTQG-------------QEEIAGSGTSYVNRTE 803
R L D P+ V + +P++F+ TQG Q+E A G S N E
Sbjct: 532 KARLLK--DLPYDVEETDDTKEPLVFWDTQGGDFPEKTEDKEVGQKE-ALLGESKSNEME 588
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A V K ++ G+KPE I VITPY GQ A L Q ++ + Y IE+ SVD F
Sbjct: 589 AMVVAKHVDNLVQSGLKPEDIAVITPYNGQLAILSQMLREK-------YPGIELGSVDGF 641
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
QGREK+ +++S VRSN +GFL + RRLNVA+TR K + V G+ + +SK
Sbjct: 642 QGREKEAVVVSLVRSNSENEVGFLGEKRRLNVAMTRPKRHLCVCGDSETISK 693
>gi|440713093|ref|ZP_20893698.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
gi|436442112|gb|ELP35280.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
Length = 735
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 162/460 (35%), Positives = 240/460 (52%), Gaps = 54/460 (11%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN Q AV A+ +++I GPPGTGKT T A I+ Q V++ G VL CA SN AVD
Sbjct: 282 ELNPPQRDAVAFAMMADDVAIIHGPPGTGKTTTIAEIIAQSVER-GERVLACAASNTAVD 340
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNMEMNSELKKLLQ-- 613
L E++ VVRV +R +D+ V I++ + EL ++L+
Sbjct: 341 NLLERLVCLMPNVVRVGHPARVFESLQEHTLDALVESDPTSTVIKD--LRRELDQILREA 398
Query: 614 ---LKEETGELSSA------DEKRYRMLKKNAEKSL----LDNADVICCTCVGAGDPRLL 660
++E G + R R + ++ E+S+ +D ADVIC T D LL
Sbjct: 399 NRPIREGGGRERKQRAELFNEAGRLRGMIRSQERSIVRAVIDRADVICTTTT--IDEELL 456
Query: 661 KIK-FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ F +++DES Q TEP M IL A +LIL GDHCQL P V+ AAR G+ SL
Sbjct: 457 SDQSFDVVVVDESCQCTEP-GMWQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLM 515
Query: 720 ERLV-VLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSL------QNGVCADERKLSKIDF 771
+RLV G + + RL VQYRM+ + +F S+ FY+G+L + + D + + DF
Sbjct: 516 QRLVHRYGEKIYRRLTVQYRMNESIMRFSSDHFYDGTLIADASVKRHLLCDLPNVEENDF 575
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVIT 828
+P+L T G +EE+ G S +N EA + ++ + G+ +QI VI
Sbjct: 576 ----TSEPLLLIDTAGAGYEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAVIA 631
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY Q L + G IE+ +VD FQGREK++++++ RSN IGFL+
Sbjct: 632 PYAAQVRNLRMRLDLDG---------IEIDTVDGFQGREKEVVLITMTRSNPDGEIGFLS 682
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D RR NVALTRAK +IV+G+ L ++ L ++++
Sbjct: 683 DQRRSNVALTRAKRKLIVVGDSATLCNHEFYSELFGYFED 722
>gi|315055809|ref|XP_003177279.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
gi|311339125|gb|EFQ98327.1| helicase SEN1 [Arthroderma gypseum CBS 118893]
Length = 2179
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 255/528 (48%), Gaps = 105/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------------------ 544
DLN +Q A+K A+ +LIQGPPG+GKT T IV ++
Sbjct: 1300 DLNLAQAKAIKSAVDNDAFTLIQGPPGSGKTKTIVAIVGAILTPILAERRVSQPKISTDS 1359
Query: 545 -----KQTGSPVLVCAPSNIAVDQLTEKIHRTGLK----------VVRVC---------- 579
T +LVCAPSN AVD+L + + G+K V+R+
Sbjct: 1360 VQANKSATSKKLLVCAPSNAAVDELVMRF-KEGVKTLNGKTQPISVIRLGRSDAINANVL 1418
Query: 580 -----------------AKSREAID----------SPVSFLALHNQI-----RNMEMNSE 607
AK+ E D + F + +I R + +E
Sbjct: 1419 DVTLDELVNAKLSQNGPAKNGEERDLQSYFNEHKETSTKFTEIRQRIDQCRARAEPVPTE 1478
Query: 608 LKKLLQL-KEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A D R + + ++ ++ ++D A VIC T G+G
Sbjct: 1479 LEREFDLLKRKKAQLSQAIDNARDKNHSAARNAELTRRRIQQEIIDGAHVICSTLSGSGH 1538
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K+A+R
Sbjct: 1539 EMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQY 1598
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFP 772
QSLF R+ L+ QYRMHPE+SKFPS FY+G LQ+G A RK P
Sbjct: 1599 EQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMAPLRKK-----P 1653
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVI 827
W + P F+ QG A G S VN E + ++ R + R +IG+I
Sbjct: 1654 WHGSELLGPYRFFDVQGMHSSAAKGHSLVNIAELTVAMRLYERLLADYRNYDFAGKIGII 1713
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L ++ + I+ +E + DAFQGRE ++II SCVR++D +GIGFL
Sbjct: 1714 TPYKGQLREL--KSRFAAKYGSSIFTAVEFNTTDAFQGRECEVIIFSCVRASD-RGIGFL 1770
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+D RR+NV LTRAK + V+GN + L + W L++ +++++ EG
Sbjct: 1771 SDIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRALIHDARDRQLYTEG 1818
>gi|262407014|ref|ZP_06083563.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294805767|ref|ZP_06764646.1| putative DNA helicase [Bacteroides xylanisolvens SD CC 1b]
gi|262355717|gb|EEZ04808.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294447090|gb|EFG15678.1| putative DNA helicase [Bacteroides xylanisolvens SD CC 1b]
Length = 649
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 262/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 143 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 200
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 201 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 255
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 256 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 314
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 315 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 364
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 365 IASTLVSSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 423
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+R GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 424 IEASRGGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRG 483
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCG---MKP 821
+ D P D + + E+ G +N+ EA+ + +++ T R G +
Sbjct: 484 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKERILD 539
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 540 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 597
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 598 NEDGQIGFLNDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLFIKKE 648
>gi|298479725|ref|ZP_06997925.1| DNA helicase [Bacteroides sp. D22]
gi|298274115|gb|EFI15676.1| DNA helicase [Bacteroides sp. D22]
Length = 649
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 262/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T + + TS+ M AL + A + LLG + FR
Sbjct: 143 AGALAELQTDGILGIQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 200
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 201 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 255
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 256 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 314
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 315 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 364
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 365 IASTLVSSNHRLLNGRRFSTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 423
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+R GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 424 IEASRGGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRG 483
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCG---MKP 821
+ D P D + + E+ G +N+ EA+ + +++ T R G +
Sbjct: 484 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKERILD 539
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 540 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 597
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 598 NEDGQIGFLNDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLFIKKE 648
>gi|417405556|gb|JAA49487.1| Putative dna replication helicase [Desmodus rotundus]
Length = 1000
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 178/482 (36%), Positives = 245/482 (50%), Gaps = 54/482 (11%)
Query: 486 EVLFRCHLPKHFS---APNL--PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATI 539
EVLF P S AP P L+ SQ AV A+ QR L++I GPPGTGKT T I
Sbjct: 165 EVLFGDAAPSPASDIQAPAFYNPSLDASQQEAVLFALSQRELAIIHGPPGTGKTTTVVEI 224
Query: 540 VYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--EAIDSPVSFLALHN 597
+ Q V++ G VL CAPSN+AVD L E + R G +V+R+ +R E+I AL
Sbjct: 225 ILQAVER-GLKVLCCAPSNVAVDNLVEALARCGRRVLRLGHPARLLESIQQHCLDAALSR 283
Query: 598 --------QIRNMEMNSELKKL--LQLKEETGELSSADEKRYRMLKKNAEKSLLDN---A 644
IR +++ L KL Q K E + + + LK+ E + L++ A
Sbjct: 284 GDSTQIVADIRR-DIDQVLVKLKKTQDKREKSNFRNEVKLLRKELKEREEAATLESLRSA 342
Query: 645 DVICCTCVGA---GDPRLLKIKFHS-ILIDESMQATEPECMVPVILGAKQLILVGDHCQL 700
DVI T GA G RLL F +++DE QA E C VP +L A + IL GDH QL
Sbjct: 343 DVILATNTGASSDGPLRLLPDDFFDMVVVDECAQALEASCWVP-LLKASKCILAGDHKQL 401
Query: 701 GPVVMCKKAARAGLSQSLFERLV-VLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNG 758
P V+ KAA+ GLS SL ERL G R L VQYRMH + ++ S YEG L
Sbjct: 402 PPTVVSPKAAQEGLSLSLMERLAGQCGAGVLRTLTVQYRMHRAIMQWASEALYEGQLTAH 461
Query: 759 VCADERKLSKIDFPWPVPDK----PMLFYVTQG-------QEEIAGSGTSYVNRTEASNV 807
ER L D P + P+L T G QE+ G R + +V
Sbjct: 462 PSVAERLLR--DLPGVAATEETGLPLLLVDTAGCGLSELEQEDDQSRGNPGEVRLVSLHV 519
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
+ + + G++ I VITPY Q L Q + ++ + E+E+ SVD FQGRE
Sbjct: 520 QAL----VDAGVRASDIAVITPYNLQVDLLRQSLTHR-------HPELEIKSVDGFQGRE 568
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
K+ +++S VRSN +GFL + RR+NVA+TRA+ + VI + + +S P L++++
Sbjct: 569 KEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVSNHPFLKTLVDYFT 628
Query: 928 EQ 929
E
Sbjct: 629 EH 630
>gi|67474564|ref|XP_653031.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56469949|gb|EAL47645.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 915
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 189/334 (56%), Gaps = 16/334 (4%)
Query: 603 EMNSELKKLLQLKEETGELSSADEKRY-RMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
+ NSE++K+ + + + +E RY +L +C T +LK
Sbjct: 529 QTNSEIQKIF---DRVSQRITVEENRYINKFISTYFDDILSGIRCVCSTLSLCTSSIMLK 585
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
KF + ++DE+ Q+ EPE + +I ++ +L+GD QL P + +A AG +S+FER
Sbjct: 586 QKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQQLQPTCLSTEAREAGFQKSMFER 644
Query: 722 LVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
+ I+ L+ QYRMHP +S+F + FY L+NGV + +R ++I +P P+
Sbjct: 645 FMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSKDRFDNRIINFFPDYTNPI 704
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
+F G E+ SGTSY N E ++++ +F++ +K +IG+I+PY+ Q+ + Q+
Sbjct: 705 MFINCDGTEQYGSSGTSYNNAGEVQIIQEVVEKFLKNKIKENEIGIISPYQAQQELISQY 764
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
+ +I+VA++D FQG EK+ II SCVRSN G+GF+ND +RLNVALTRA
Sbjct: 765 VS----------TKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFVNDYKRLNVALTRA 814
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
K G+I+IGN L +WN L++ + +K L E
Sbjct: 815 KRGLIIIGNIPTLVTSKVWNMLIHHFYLKKALFE 848
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL---------VKQT 547
++ PNL +LN Q A+ +A+ +SL+ GPPGTGKT + +I L + +
Sbjct: 304 YNIPNLSNLNDYQRKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKYRFYNINRG 363
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
+LVCA SN AVD + K+ + VRV A + F ++IR NS
Sbjct: 364 EKKLLVCASSNNAVDVICSKLIEKDIPTVRVVADEQ--------FENCSDKIRE---NSL 412
Query: 608 LKKLLQLKEETG 619
LKK ++ E+ G
Sbjct: 413 LKKAIEFTEKKG 424
>gi|159128659|gb|EDP53773.1| DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 730
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 172/523 (32%), Positives = 256/523 (48%), Gaps = 75/523 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCHLPKHFSAPNLPDLNRSQVY 511
+F RM + K A S ++ GH + + P F P L N SQ
Sbjct: 196 TFRRMNQTMEKMAKMTDSEYSHFMRVAFGHTAPMQPDYGAIGPLEFVDPTL---NDSQKE 252
Query: 512 AVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ Q+VK+ VLVC PSNI+VD + E++
Sbjct: 253 AIRFALAARDVALIHGPPGTGKTHTLIELILQMVKRK-LRVLVCGPSNISVDNIVERLAP 311
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
G+ VVR+ +R ++ + L ++ I+++ + K+ K TG
Sbjct: 312 NGVPVVRIGHPARLLPSVLEHSLEVLTHTSEAAAIIKDVRKEIDEKQASIRKTRTGRERR 371
Query: 624 A---DEKRYRMLKKNAEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A D K R + E +DN ++V+ T GAG +L KF ++IDE+ QA
Sbjct: 372 AIYDDLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDVVVIDEASQAL 431
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCK---------------KAARA--------- 712
E +C +P +L A +++L GDH QL P V K A A
Sbjct: 432 EAQCWIP-LLSASKVVLAGDHLQLPPTVKSSVDKLKNTKKKEKSDTKDASANSAEIIGDF 490
Query: 713 GLSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
L +LF+RL+ L GI+ L QYRMH ++ +FPS+ YE L R L
Sbjct: 491 SLETTLFDRLLSLHGPGIKRM-LTTQYRMHEKIMQFPSDELYESKLVAAEAVKSRLLK-- 547
Query: 770 DFPWPVPD-----KPMLFYVTQG-------QEEIAGS-----GTSYVNRTEASNVEKITT 812
D P+ V + +P++F+ TQG +++ G G S N EA V K
Sbjct: 548 DLPYEVEETDDTREPIVFWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALVVAKHVQ 607
Query: 813 RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
I+ G+KPE I ITPY GQ + L ++ + Y +E+ SVD FQGREK+ ++
Sbjct: 608 NLIQAGVKPEDIACITPYNGQLSLLSSMLREK-------YPGLELGSVDGFQGREKEAVV 660
Query: 873 MSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
+S VRSN +GFL + RRLNVA+TR K + + G+ + +SK
Sbjct: 661 VSLVRSNSEHEVGFLGEKRRLNVAMTRPKRHLCICGDSETISK 703
>gi|423215342|ref|ZP_17201869.1| hypothetical protein HMPREF1074_03401 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691910|gb|EIY85150.1| hypothetical protein HMPREF1074_03401 [Bacteroides xylanisolvens
CL03T12C04]
Length = 645
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 262/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 139 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 196
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 197 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 251
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 252 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 310
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 311 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 360
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 361 IASTLVSSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 419
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+R GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 420 IEASRGGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRG 479
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCG---MKP 821
+ D P D + + E+ G +N+ EA+ + +++ T R G +
Sbjct: 480 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKERILD 535
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 536 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 593
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 594 NEDGQIGFLNDLRRMNVAITRARMKLVILGDASTLAKHPFYKRLMLFIKKE 644
>gi|327304821|ref|XP_003237102.1| DNA helicase [Trichophyton rubrum CBS 118892]
gi|326460100|gb|EGD85553.1| DNA helicase [Trichophyton rubrum CBS 118892]
Length = 717
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 257/539 (47%), Gaps = 78/539 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL-FRCHLPKHFSAPNLPDLNRSQVY 511
++ RM + K +S + + L GH L F P F P+L D SQ
Sbjct: 180 TYRRMNQTMAKLEKLQESEHSQLIRVLFGHTTPLPLDFESVGPLEFMDPSLND---SQKE 236
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ QLV Q VLVC PSNI+VD + E++
Sbjct: 237 AIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISVDNIVERLAS 295
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
+ +VRV +R +D + L+ ++ ++++ + K+ K G
Sbjct: 296 HKVPLVRVGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERR 355
Query: 624 A---DEKRYRMLKKNAEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A D K R + E +DN + V+ T GAG +L KF +LIDE+ QA
Sbjct: 356 AIYGDLKELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAR 415
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR------------------------- 711
E +C +P +L A +++L GDH QL P + K ++
Sbjct: 416 EAQCWIP-LLPASRVVLAGDHLQLPPTIKSKSSSNLYQINSALWDKKEDLHFNELSNTFD 474
Query: 712 -AGLSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
L +LF+RL+ L GI+ L QYRMH ++ FPS+ YE L ER L
Sbjct: 475 MRNLEITLFDRLLSLHGTGIKRM-LTTQYRMHQKIMDFPSDELYESKLIAADAVRERLLK 533
Query: 768 KIDFPWPVPD-----KPMLFYVTQGQEEIAGSG------------TSYVNRTEASNVEKI 810
D + V D +P++FY TQG + + S S N EA+ V +
Sbjct: 534 --DLHYEVEDTDDTREPLVFYDTQGGDFLEKSPDSNGISAKSLLVESKCNDMEAAVVARH 591
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
+ G++PE I VITPY Q A L Q ++ + + +E+ SVD FQGREK+
Sbjct: 592 VENLVSAGVRPEDIAVITPYNAQVALLSQLLKEK-------FPTLELGSVDGFQGREKEA 644
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKE 928
+++S VRSN +GFL + RRLNVA+TR + + + G+ + +S P + F +E
Sbjct: 645 VVVSLVRSNQDHEVGFLGEKRRLNVAMTRPRRHLCICGDSETVSSGSPFLKRWMAFLEE 703
>gi|345507626|ref|ZP_08787273.1| hypothetical protein BSAG_02536 [Bacteroides sp. D1]
gi|345455366|gb|EEO50825.2| hypothetical protein BSAG_02536 [Bacteroides sp. D1]
Length = 645
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 262/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 139 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 196
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 197 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 251
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 252 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 310
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 311 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 360
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 361 IASTLVSSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 419
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+R GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 420 IEASRGGLDHTLMEKVVQQKPSAVSLLKVQYRMHETIMQFPSDWFYHGELEAAPEVRYRG 479
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCG---MKP 821
+ D P D + + E+ G +N+ EA+ + +++ T R G +
Sbjct: 480 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKERILD 535
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 536 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 593
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 594 NEDGQIGFLNDLRRMNVAITRARMKLVILGDTSTLAKHPFYKRLMLFIKKE 644
>gi|115433256|ref|XP_001216765.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189617|gb|EAU31317.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 701
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 236/462 (51%), Gaps = 63/462 (13%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A++ A+ P ++LI GPPGTGKT T ++ QLV++ G VLVC PSNI+VD
Sbjct: 225 LNDSQKEAIRFALAAPDVALIHGPPGTGKTHTLIELIVQLVRR-GQRVLVCGPSNISVDN 283
Query: 564 LTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKE 616
+ E++ + VVR+ +R +D + L ++ +R++ + K K
Sbjct: 284 IVERLAPKEVSVVRIGHPARLLPSVLDHSLEVLTQTSEAAAIVRDVRREMDEKHASIRKT 343
Query: 617 ETGELSSA---DEKRYRMLKKNAEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILI 669
G A D K R + E +DN + V+ T GAG +L KF ++I
Sbjct: 344 RFGREKRAIYQDIKELRREFREREARCVDNLVRGSSVVLATLHGAGGHQLRNQKFDVVVI 403
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA-------ARAG--------- 713
DE+ QA E +C +P +L A +++L GDH QL P V K A G
Sbjct: 404 DEASQALEAQCWIP-LLTAPKVVLAGDHLQLPPTVKSKAGDAPPQDGAAEGDADVVRGIS 462
Query: 714 LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
L ++F+RL+ + + L QYRMH + +FPS+ YEG L R L D
Sbjct: 463 LETTMFDRLLAMHGPAIKRMLTTQYRMHERIMRFPSDELYEGRLMAADAVKARLLK--DL 520
Query: 772 PWPVPD-----KPMLFYVTQG-------------QEEIAGSGTSYVNRTEASNVEKITTR 813
P+ V + +P++F+ TQG Q+E A G S N EA V K
Sbjct: 521 PYEVQETDDTREPVVFWDTQGGDFPEKTEDNEVGQKE-ALLGESKSNEMEALVVGKHVDA 579
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
++ G++PE I VITPY GQ A L Q ++ + Y +E+ SVD FQGREK+ +++
Sbjct: 580 LVQAGVRPEDIAVITPYNGQLAVLSQMLREK-------YPGLELGSVDGFQGREKEAVVV 632
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
S VRSN +GFL + RRLNVA+TR K + V G+ + +S+
Sbjct: 633 SLVRSNSKHEVGFLGERRRLNVAMTRPKRHLCVCGDSETISR 674
>gi|213408549|ref|XP_002175045.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
gi|212003092|gb|EEB08752.1| helicase sen1 [Schizosaccharomyces japonicus yFS275]
Length = 1974
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 257/530 (48%), Gaps = 101/530 (19%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTG--------------- 548
+N Q A+ A R +L+QGPPGTGKT T IV L+ G
Sbjct: 1273 VNEPQALAIHAACARTGFTLVQGPPGTGKTKTILGIVSALLTSGGQGRRFDAPGQNGNTQ 1332
Query: 549 ---SPVLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLAL 595
VL+CAPSN A+D++ ++ + G+ K++RV E+I+ V L
Sbjct: 1333 PGTKKVLICAPSNAAIDEILLRL-KDGIFDHEGIKFKPKILRVGYS--ESINPHVKEFTL 1389
Query: 596 HN------QIRNMEMNSELKKLLQLKEETGEL--------------------SSADEKRY 629
Q+ N++ N + + +Q+++ E+ A E +
Sbjct: 1390 DEKMQEQMQVLNLKKNQDNGESMQVRKRHDEILKERDALRAQLEKARNSGINDPAVEMKL 1449
Query: 630 R----------------------------MLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
R + KK + LL +A++IC T +G LLK
Sbjct: 1450 REVMKTKNQLEQRLDDMRRQQGIANRNMDIAKKQIQSQLLKDAEIICSTLSASGHDILLK 1509
Query: 662 --IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
I F S++IDE+ QA E ++P+ G ++ I+VGD QL P V+ K A++ G S+SL+
Sbjct: 1510 SGISFPSVIIDEAAQAVELSALIPLKYGCERCIMVGDPNQLPPTVLSKTASQNGYSESLY 1569
Query: 720 ERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV-PD 777
R+ F L +QYRMHPE+S+FPS++FY L +G D +KL+ PW P
Sbjct: 1570 VRMHKQNPNSSFLLSIQYRMHPEISRFPSSYFYGSRLLDG--PDMQKLTA--RPWHHDPT 1625
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQ 833
+ + E + S N EAS V +K+ +I M+ ++G++TPY Q
Sbjct: 1626 FGIYRFFDVRTRESSSITKSVYNPEEASFVLTLYDKLVQDYINVDME-GKVGIVTPYRRQ 1684
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
L MQ++ I++ ++ +VD FQG+EKD+I+ SCVR + GIGFL+D RRL
Sbjct: 1685 LQEL--RMQFERRYGPLIFKRVDFNTVDGFQGQEKDIILFSCVRGDMGGGIGFLSDTRRL 1742
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
NVALTRAK + +IGN L+K +W+ L+ + + LV ++ L+ S
Sbjct: 1743 NVALTRAKSSLYIIGNVGTLTKDKMWSALITDAQTRSCLVTSSIDQLRRS 1792
>gi|70988781|ref|XP_749245.1| DNA helicase [Aspergillus fumigatus Af293]
gi|66846876|gb|EAL87207.1| DNA helicase, putative [Aspergillus fumigatus Af293]
Length = 730
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 172/523 (32%), Positives = 256/523 (48%), Gaps = 75/523 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCHLPKHFSAPNLPDLNRSQVY 511
+F RM + K A S ++ GH + + P F P L N SQ
Sbjct: 196 TFRRMNQTMEKMAKMTDSEYSHFMRVAFGHTAPMQPDYGAIGPLEFVDPTL---NDSQKE 252
Query: 512 AVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ Q+VK+ VLVC PSNI+VD + E++
Sbjct: 253 AIRFALAARDVALIHGPPGTGKTHTLIELILQMVKRK-LRVLVCGPSNISVDNIVERLAP 311
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
G+ VVR+ +R ++ + L ++ I+++ + K+ K TG
Sbjct: 312 NGVPVVRIGHPARLLPSVLEHSLEVLTHTSEAAAIIKDVRKEIDEKQASIRKTRTGRERR 371
Query: 624 A---DEKRYRMLKKNAEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A D K R + E +DN ++V+ T GAG +L KF ++IDE+ QA
Sbjct: 372 AIYDDLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDVVVIDEASQAL 431
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCK---------------KAARA--------- 712
E +C +P +L A +++L GDH QL P V K A A
Sbjct: 432 EAQCWIP-LLSASKVVLAGDHLQLPPTVKSSVDKLKNTKKKEKSDTKDASANSAEIIGDF 490
Query: 713 GLSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
L +LF+RL+ L GI+ L QYRMH ++ +FPS+ YE L R L
Sbjct: 491 SLETTLFDRLLSLHGPGIKRM-LTTQYRMHEKIMQFPSDELYESKLVAAETVKSRLLK-- 547
Query: 770 DFPWPVPD-----KPMLFYVTQG-------QEEIAGS-----GTSYVNRTEASNVEKITT 812
D P+ V + +P++F+ TQG +++ G G S N EA V K
Sbjct: 548 DLPYEVEETDDTREPIVFWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALVVAKHVQ 607
Query: 813 RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
I+ G+KPE I ITPY GQ + L ++ + Y +E+ SVD FQGREK+ ++
Sbjct: 608 NLIQAGVKPEDIACITPYNGQLSLLSSMLREK-------YPGLELGSVDGFQGREKEAVV 660
Query: 873 MSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
+S VRSN +GFL + RRLNVA+TR K + + G+ + +SK
Sbjct: 661 VSLVRSNSEHEVGFLGEKRRLNVAMTRPKRHLCICGDSETISK 703
>gi|255951120|ref|XP_002566327.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593344|emb|CAP99727.1| Pc22g24390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 2167
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 259/527 (49%), Gaps = 98/527 (18%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------YQLVKQTGSPV--- 551
+NR+Q A+K A+ +LIQGPPG+GKT T +V Q+VK G+PV
Sbjct: 1306 INRAQARAIKSAVDNDAFTLIQGPPGSGKTKTITALVGSLLSDVLGKQVVKVNGAPVARN 1365
Query: 552 ------LVCAPSNIAVDQLTEKI-------HRTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
L+CAPSN AVD+L ++ H KV + +AI++ V + L
Sbjct: 1366 ALSKKLLLCAPSNAAVDELVMRLKDGVKTTHGRQEKVSVLRLGRSDAINTKVLDVTLEEM 1425
Query: 599 IRNMEMNSE--------LKKLLQ------------------------------------L 614
+ N +N + L+KL + +
Sbjct: 1426 V-NARLNQDPSKGNGVDLQKLYEEHKTTDTSFKELRARLDEARAKGLPPPEELEREFDLM 1484
Query: 615 KEETGELSSADEK----------RYRMLKKNAEKSLLDNADVICCTCVGAGDP--RLLKI 662
K++ +LS++ +K M K+ ++ +++ + VIC T G+G + + +
Sbjct: 1485 KKKRSQLSTSIDKARDQNHTLARNADMHKRRIQEQIINESHVICTTLSGSGHEIFQSMNV 1544
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
+F +++IDE+ Q E ++P+ G + +LVGD QL P V+ K A++ QSLF R+
Sbjct: 1545 EFETVIIDEAAQCIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKMASKFQYEQSLFVRM 1604
Query: 723 VVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--KP 779
+ L +VQYRMHP +S FPS FY+G LQ+G D L + PW + P
Sbjct: 1605 QKNHPQDVHLLDVQYRMHPAISHFPSVTFYDGKLQDG--PDMATLRQ--RPWHQSELLGP 1660
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQ-RA 835
F+ QG A G S VN E ++ R I + + +IG+ITPY+GQ R
Sbjct: 1661 YRFFDVQGMHSSAVRGHSLVNYAELQVAMRLYDRLITDVKEYDFAGKIGIITPYKGQLRE 1720
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
Q Q G I ++++ + DAFQGRE ++II SCVR+++ +GIGFL D RR+NV
Sbjct: 1721 LKNQFTQRYGE---DILRKVDFNTTDAFQGRESEVIIFSCVRASN-KGIGFLADIRRMNV 1776
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKE 942
LTRAK + V+GN + L + WN L+ +E+ V EG + + E
Sbjct: 1777 GLTRAKSSLWVLGNSQSLEQGQFWNGLIKNARERNVYTEGDIMKILE 1823
>gi|242038133|ref|XP_002466461.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
gi|241920315|gb|EER93459.1| hypothetical protein SORBIDRAFT_01g008150 [Sorghum bicolor]
Length = 818
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 217/409 (53%), Gaps = 54/409 (13%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
VLVCAPSN A+D++ ++ +TG+ K+VR+ K ALH+ ++
Sbjct: 370 VLVCAPSNSALDEIVLRVLKTGIRDENNNTYNPKIVRIGVK------------ALHS-VK 416
Query: 601 NMEMNSELKKLLQLKEET---GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
+ M+ +++ L + T G + + R R S+LD A ++ T +G
Sbjct: 417 AVSMDYLIQQKLSGVDRTLDGGRRGAGEYDRIR-------ASILDEAAIVFSTLSFSGSS 469
Query: 658 RLLKIK--FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
++ F ++IDE+ QA EP ++P++ G +Q+ LVGD QL V+ + A + G
Sbjct: 470 IFSRMSRAFDVVIIDEAAQAVEPATLIPLVHGCRQIFLVGDPVQLPATVISQTAQKLGYG 529
Query: 716 QSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
SLF+R G L++QYRMHPE+S FPS FYEG LQ+G ++ PW
Sbjct: 530 TSLFKRFQAAGFPVQMLKIQYRMHPEISMFPSKEFYEGVLQDGEGLSRKR------PWHS 583
Query: 776 PD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PE-----QIGVI 827
P F+ G E S+VN+ E VE IT + + M+ PE ++GVI
Sbjct: 584 YSCFGPFCFFDVDGIESQPSGSGSWVNQDE---VEFITLLYHQLAMRYPELKSSPEVGVI 640
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+PY Q L ++ + + + I+V++VD FQGREK+++I SCVR N+ Q IGF+
Sbjct: 641 SPYRHQVKLLKD--SFRSTFGDQSKELIDVSTVDGFQGREKEIVIFSCVRCNEEQKIGFV 698
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
+D RR+NVA+TRAK ++V+G+ L + WNNL+ KE+ + P
Sbjct: 699 SDFRRMNVAITRAKSAVLVVGSASTLKQDKHWNNLVESAKERNRFFKVP 747
>gi|298375719|ref|ZP_06985676.1| DNA helicase [Bacteroides sp. 3_1_19]
gi|298268219|gb|EFI09875.1| DNA helicase [Bacteroides sp. 3_1_19]
Length = 640
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 241/457 (52%), Gaps = 36/457 (7%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LNRSQ AV + + +S++ GPPGTGKT T +Y+ + + V+VCA SN A
Sbjct: 185 FPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VIVCAQSNTA 243
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD ++EK+ G+ V+R+ +R D +SF ++ +R+++ N
Sbjct: 244 VDCISEKLVDRGINVLRIGNPTR-INDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSN 302
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
KK + ++ S + R L+ + L D A V+ CT VG+ + ++ F
Sbjct: 303 MR-KKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
++ IDE+ QA E C + I A ++IL GDH QL P + C +A R GL ++L +++
Sbjct: 362 TLFIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT 420
Query: 726 GIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
L ++QYRMH ++ +F S +FY L++ R + ++D P D +
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT 480
Query: 785 TQGQEEIAGSGTSYVNRTEA--------SNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+EE S VNR EA S ++KI+ R + G+I+PY+ Q +
Sbjct: 481 ENTREETM----SRVNRQEAELLVEQSRSYIQKISKE--RVLEENIDFGLISPYKAQVQY 534
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
++ + Q + + + I V +VD FQG+E+D+I++S VR+N+ IGFLND RR+NVA
Sbjct: 535 -IRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVA 593
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
+TRA+ ++++G+ L++ +N L N+ ++ ++
Sbjct: 594 ITRARMKLMILGDASTLTRHAFYNELYNYISQRGKII 630
>gi|54290635|dbj|BAD62206.1| regulator of nonsense transcripts 1-like [Oryza sativa Japonica
Group]
Length = 788
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 211/406 (51%), Gaps = 48/406 (11%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ H+ ++
Sbjct: 341 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKA-------------HHSVK 387
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
+ M+ L+Q K + SS +R S+LD A ++ T +G
Sbjct: 388 AVSMD----YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFS 443
Query: 661 KIK--FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
++ F ++IDE+ QA EP ++P+I G KQ+ LVGD QL V+ A + G SL
Sbjct: 444 RMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSL 503
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
F+R G L++QYRMHPE+S FPS FYEG L++G +++ PW
Sbjct: 504 FKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSC 557
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PE-----QIGVITPY 830
P F+ G E S+VN E VE IT + + M+ PE Q+ VI+PY
Sbjct: 558 FGPFCFFDVDGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPY 614
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L H ++ + + + I+V +VD FQGREK+++I SCVR N Q IGF++D
Sbjct: 615 RHQVKLLKDH--FRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDF 672
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
RR+NVA+TRA+ ++V+G+ L + WNNL+ KE+ + P
Sbjct: 673 RRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVP 718
>gi|256840040|ref|ZP_05545549.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738970|gb|EEU52295.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 640
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 241/457 (52%), Gaps = 36/457 (7%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LNRSQ AV + + +S++ GPPGTGKT T +Y+ + + V+VCA SN A
Sbjct: 185 FPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VIVCAQSNTA 243
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD ++EK+ G+ V+R+ +R D +SF ++ +R+++ N
Sbjct: 244 VDCISEKLVDRGINVLRIGNPTR-INDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSN 302
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
KK + ++ S + R L+ + L D A V+ CT VG+ + ++ F
Sbjct: 303 MR-KKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
++ IDE+ QA E C + I A ++IL GDH QL P + C +A R GL ++L +++
Sbjct: 362 TLFIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT 420
Query: 726 GIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
L ++QYRMH ++ +F S +FY L++ R + ++D P D +
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT 480
Query: 785 TQGQEEIAGSGTSYVNRTEA--------SNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+EE S VNR EA S ++KI+ R + G+I+PY+ Q +
Sbjct: 481 ENTREETM----SRVNRQEAELLVEQLRSYIQKISKE--RVLEEHIDFGLISPYKAQVQY 534
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
++ + Q + + + I V +VD FQG+E+D+I++S VR+N+ IGFLND RR+NVA
Sbjct: 535 -IRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVA 593
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
+TRA+ ++++G+ L++ +N L N+ ++ ++
Sbjct: 594 ITRARMKLMILGDASTLTRHAFYNELYNYISQRGKII 630
>gi|440291801|gb|ELP85043.1| splicing endonuclease positive effector sen1, putative [Entamoeba
invadens IP1]
Length = 1569
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 164/510 (32%), Positives = 258/510 (50%), Gaps = 72/510 (14%)
Query: 501 NLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV------------KQT 547
N + N SQ++A+ ++ + SLIQGPPGTGKT+T I+ ++ +
Sbjct: 274 NKKEFNDSQIHAMFRSLAKSGFSLIQGPPGTGKTMTLCGIIGVILYGNSSSVFSKSSESH 333
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGL-------KVVRVCAKSREAIDSP-VSFLALHNQI 599
VL+C+PSN A+D + K+ + G+ K V++ + +P + L L N +
Sbjct: 334 HERVLICSPSNAAIDGIIMKLLKMGVYDENGEKKSVKIVRVGTPTLTNPEIKDLVLENLV 393
Query: 600 -----RNMEMNSEL--KKLLQLKEETGE--------------------LSSADEKRYRM- 631
R EM+ E KK+ +LKE+ L D+ + ++
Sbjct: 394 GKEIERRGEMSLEYLDKKINELKEKLKNALATNAKINKDKLKSGLALLLKQKDDLQNKIC 453
Query: 632 -LKKNAEKSLLDNADVICCTCVGAGDPRL---LKIKFHSILIDESMQATEPECMVPVILG 687
+K + ++ N DVICCT AG L L K + +IDE++Q E ++P+ G
Sbjct: 454 AMKHSVTIDIISNCDVICCTLNSAGCDTLQQHLFGKIETCIIDEAVQCVEVSALIPLKYG 513
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
++ I++GD QL V+ K+ ++SLFERL+ G+ L QYRM ++ +FPS
Sbjct: 514 VERCIMIGDQKQLPSTVLSPKSITYKYNKSLFERLLECGLNVTLLTQQYRMESKIREFPS 573
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FYEG L +GV K+ KI+ +LF G+E+ G +S N E V
Sbjct: 574 NEFYEGRLADGV-----KIEKIN----SVSNSVLFLNVCGKEDRLGKESSLFNTEEVKAV 624
Query: 808 EKITTRF---IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
+ T + C IG+ITPY Q V+ Q + + + V +VD FQ
Sbjct: 625 VFLLTEISKNVECVHW--DIGIITPYRKQ-VLDVKKAIEQNEVAKSL--NVLVNTVDGFQ 679
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
GRE D++IMSCVRS++H GIGF+ D RRLNVA+TRAK + V+GN K L + +W + +N
Sbjct: 680 GREFDIVIMSCVRSSEHNGIGFVEDERRLNVAITRAKRALCVVGNIKTLRQVKVWEDYIN 739
Query: 925 FYKEQKVLVE-GPLNNLKESLILFSKPKQY 953
+ + ++++E + +S ++F KP Y
Sbjct: 740 WLTKNRLILEFDDIIQQPDSFMMF-KPNDY 768
>gi|358375281|dbj|GAA91865.1| DNA helicase [Aspergillus kawachii IFO 4308]
Length = 733
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 238/468 (50%), Gaps = 69/468 (14%)
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ Q+V Q VLVC PSNI+V
Sbjct: 253 PTLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMV-QRKQRVLVCGPSNISV 311
Query: 562 DQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
D + E++ + VVR+ +R +D + L ++ E+ +++K + K+ +
Sbjct: 312 DNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTSEA--AEIVRDVRKEIDQKQAS 369
Query: 619 -GELSSADEKR------------YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
+ SA E+R +R + ++L+ + V+ T GAG +L KF
Sbjct: 370 IRKTRSARERRAIYDDLRELRREFRERENKCVENLVRESSVVLATLHGAGGHQLKNQKFD 429
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKK----------------- 708
++IDE+ QA E +C +P +L A +++L GDH QL P V K
Sbjct: 430 VVIIDEASQALEAQCWIP-LLSASKVVLAGDHLQLPPTVKSTKDDVRKMKAKEEDKKENG 488
Query: 709 --AARAGLSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
L +LF+RL+ + GI+ L QYRMH ++ +FPS+ Y+ L
Sbjct: 489 ELLDNVSLETTLFDRLLSMHGPGIKRM-LTTQYRMHEKIMQFPSDELYDSKLMAADTVKA 547
Query: 764 RKLSKIDFPWPVPD-----KPMLFYVTQGQE-----------EIAGSGTSYVNRTEASNV 807
R L D P+ V + +P++F+ TQG + + A G S N EA V
Sbjct: 548 RLLK--DLPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGDSKSNDMEALVV 605
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
+ + G+ PE I VITPY GQ A L Q ++ + Y IE+ SVD FQGRE
Sbjct: 606 SRHVDALVDAGIHPEDIAVITPYNGQLAVLSQMLREK-------YPSIELGSVDGFQGRE 658
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
K+ +++S VRSN +GFL + RRLNVA+TR K + + G+ + +SK
Sbjct: 659 KEAVVVSLVRSNSEHEVGFLGERRRLNVAMTRPKRHLCICGDSETISK 706
>gi|258572474|ref|XP_002544999.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905269|gb|EEP79670.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 2153
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 262/550 (47%), Gaps = 106/550 (19%)
Query: 501 NLPDLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGS---------- 549
N +LN +Q AVK AI +LIQGPPG+GKT T +V L+ T S
Sbjct: 1291 NTYNLNLAQSKAVKSAIDNDAFTLIQGPPGSGKTKTIVALVGALLSNTLSEHRIAPPRPG 1350
Query: 550 ---------PVLVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPV-- 590
+LVCAPSN AVD+L + + G+K + V R +AI++ V
Sbjct: 1351 DKTARSMAKKLLVCAPSNAAVDELVMRF-KEGVKTLYGRSQNISVIRLGRSDAINANVLD 1409
Query: 591 -------------------------SFLALHNQIRNMEMNSELKKLLQLKEETGELSSAD 625
S H + N + N ++L Q + + + +
Sbjct: 1410 VTLDELVNAKLSQAGQKNGNERDLQSLYTEHKETSN-KFNEIRERLDQCRAKGQAVPNEL 1468
Query: 626 EKRYRMLK---------------------KNAE-------KSLLDNADVICCTCVGAGDP 657
++ + +LK +NAE + ++D A VIC T G+G
Sbjct: 1469 DREFDLLKRKRAQLSQAIDSARDKNQAAARNAELTRRKIQQEIIDGAHVICATLSGSGHD 1528
Query: 658 --RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
+ L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K+A+R
Sbjct: 1529 MFQTLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKEASRFQYE 1588
Query: 716 QSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
QSLF R+ + L+ QYRMHPE+S+FPS FY+G LQ+G ++ PW
Sbjct: 1589 QSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSTAFYDGRLQDGPDMARLRMR----PWH 1644
Query: 775 VPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITP 829
P F+ QG A G S VN E ++ R I + +IG+ITP
Sbjct: 1645 NTSLLGPYRFFDVQGMHASAPKGHSLVNLAELRVAMRLYERLIADFPTYDFSGKIGIITP 1704
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y+GQ L Q Q+ I++ +E + DAFQGRE ++II SCVR++ H GIGFL D
Sbjct: 1705 YKGQLRELKQ--QFANKYGNAIFKAVEFNTTDAFQGRECEVIIFSCVRASSH-GIGFLAD 1761
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSK 949
RR+NV LTRAK + V+GN + L + W L+ +E+ + +G + L ++
Sbjct: 1762 IRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRGLVKDARERNLYTDGDVYKLLQT------ 1815
Query: 950 PKQYFKKNNM 959
P++ + N++
Sbjct: 1816 PQKLLEPNDI 1825
>gi|222628874|gb|EEE61006.1| hypothetical protein OsJ_14821 [Oryza sativa Japonica Group]
Length = 848
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 211/406 (51%), Gaps = 48/406 (11%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ H+ ++
Sbjct: 401 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKA-------------HHSVK 447
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
+ M+ L+Q K + SS +R S+LD A ++ T +G
Sbjct: 448 AVSMD----YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFS 503
Query: 661 KIK--FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
++ F ++IDE+ QA EP ++P+I G KQ+ LVGD QL V+ A + G SL
Sbjct: 504 RMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSL 563
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
F+R G L++QYRMHPE+S FPS FYEG L++G +++ PW
Sbjct: 564 FKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSC 617
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PE-----QIGVITPY 830
P F+ G E S+VN E VE IT + + M+ PE Q+ VI+PY
Sbjct: 618 FGPFCFFDVDGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPY 674
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L H ++ + + + I+V +VD FQGREK+++I SCVR N Q IGF++D
Sbjct: 675 RHQVKLLKDH--FRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDF 732
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
RR+NVA+TRA+ ++V+G+ L + WNNL+ KE+ + P
Sbjct: 733 RRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVP 778
>gi|409099302|ref|ZP_11219326.1| ATPase AAA [Pedobacter agri PB92]
Length = 637
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 256/530 (48%), Gaps = 72/530 (13%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFA--VDDQSVSAYIYHRLLGHNVDEVLFRCHLP-----K 495
VD ++ + S+D MQ AL++ + D Q + I +L P +
Sbjct: 124 LGVDLLFDNNSYDEMQNALKQASNLADHQPENKLI----------SILTEGEKPSFQNEE 173
Query: 496 HFSAPNLPDLNRSQVYAV-KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC 554
F PN LN SQ AV K L+++ GPPGTGKT T + L K +LV
Sbjct: 174 KFFIPN--KLNESQQQAVHKIVTANHLAIVHGPPGTGKTTTLVHAIKSLTKHYDQKILVV 231
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQL 614
APSN AVD LTEK+ GL V+R+ +R + S L M + ++K + L
Sbjct: 232 APSNTAVDLLTEKLAAEGLNVIRIGNPARVSDRLLASTLE-----HKMADHPDMKSVKSL 286
Query: 615 KEETGELSSADEKRYRMLKK---------------------NAEKSLLDN----ADVICC 649
K++ E + K R K E+ ++DN A +I
Sbjct: 287 KKQANEFKNMAHKYKRSFGKAERDQRKALFDEAHKIGKEVEKTEQYIMDNLFSKAQIITA 346
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
T VGA + +K+++++IDE+ QA EP C +P IL A++++L GDH QL P + +A
Sbjct: 347 TLVGANHYTVRNLKYNTVVIDEAGQALEPACWIP-ILKAEKVVLAGDHFQLSPTIKSSEA 405
Query: 710 ARAGLSQSLFERLVVLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
R GLS++L E+ V L L QYRMH + + S FY L + A R L
Sbjct: 406 GRNGLSKTLLEKSVSLHPESVVLLNEQYRMHESIMGYSSQVFYNSQL-HAHHAVARHLVF 464
Query: 769 IDFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE--- 822
D D+P+ F T G E++ GTS N EA+ + + I+ E
Sbjct: 465 AD------DEPLAFIDTAGCSFDEKL--DGTSTTNPDEATFLVTHLSALIQELESKETIV 516
Query: 823 ---QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN 879
I +++PY+ Q+ +V+ + + L +I V ++D+FQG+E+D++ +S RSN
Sbjct: 517 DFPSIAIVSPYK-QQVQIVKMLVEENELLMAHQDKISVNTIDSFQGQERDVVYISLTRSN 575
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
IGFL D RR+NVA+TRA+ ++VIG+ LSK + + + Y E+
Sbjct: 576 ADGSIGFLADTRRMNVAMTRARKKLVVIGDSATLSKAKFYADFI-IYAEK 624
>gi|349579545|dbj|GAA24707.1| K7_Hcs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 683
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 284/566 (50%), Gaps = 89/566 (15%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKST---SFDRMQLALRKFAVDD 468
G V K+ D ++ + L+ S +S +I K+T +++RM+ +RK +
Sbjct: 117 GVVYKMSDT---QITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLS--- 170
Query: 469 QSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSL 523
+S+ I +++ + V+E R +P S N+ P+LN SQ A+ AI L++
Sbjct: 171 -EISSPIQDKIIQYLVNE---RPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAINNDLTI 226
Query: 524 IQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLTEKIH---------RTGL 573
I GPPGTGKT T ++ QL +K +L+C PSNI+VD + E++ R G
Sbjct: 227 IHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGH 286
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR----- 628
+ + R ++D L+ N I +++ E+ KL+Q E +L + +++
Sbjct: 287 PARLLDSNKRHSLD----ILSKKNTIVK-DISQEIDKLIQ---ENKKLKNYKQRKENWNE 338
Query: 629 YRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK--------FHSILIDESM 673
++L+K+ +K L+ + ++ T G+ L + F +++IDE
Sbjct: 339 IKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVS 398
Query: 674 QATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCK--KAARAGLSQSLFERLVVLGIR 728
QA EP+C +P+I Q L+L GD+ QL P + + K L +LF+R++ I
Sbjct: 399 QAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIF 456
Query: 729 PFR-----LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDK- 778
P R L VQYRM+ ++ +FPS+ Y G L R L ID P P D
Sbjct: 457 PKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDD 514
Query: 779 ----PMLFYVTQGQE--EIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
P+++Y TQG E E A T S N E + V++ + IGVI+P
Sbjct: 515 DTKIPLIWYDTQGDEFQETADEATILGSKYNEDEIAIVKEHIENLRSFNVPENSIGVISP 574
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q + L + + + L +IE+++VD FQGREKD+II+S VRSN+ +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSK 915
RRLNVA+TR + ++V+GN +VL +
Sbjct: 630 ERRLNVAMTRPRRQLVVVGNIEVLQR 655
>gi|296806473|ref|XP_002844046.1| DNA-binding protein SMUBP-2 [Arthroderma otae CBS 113480]
gi|238845348|gb|EEQ35010.1| DNA-binding protein SMUBP-2 [Arthroderma otae CBS 113480]
Length = 720
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 259/537 (48%), Gaps = 76/537 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL-FRCHLPKHFSAPNLPDLNRSQVY 511
++ RM + K ++S + + L GH L P F P+L N SQ
Sbjct: 185 TYRRMNQTMMKLEKMEESEYSQLIRVLFGHTTPSPLDLESVGPLEFMDPSL---NDSQRE 241
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AV+ A+ R ++LI GPPGTGKT T ++ QLV + +LVC PSNI+VD + E++
Sbjct: 242 AVRFALASREIALIHGPPGTGKTHTLIELIRQLVLRK-KRILVCGPSNISVDNIVERLAS 300
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
+ +VR+ +R +D + L+ ++ ++++ + K+ K G
Sbjct: 301 HKVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDAKQASIRKTRNGRERR 360
Query: 624 ADEKRYRMLKKN---AEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A R L+K E +DN + V+ T GAG +L KF +LIDE+ QA
Sbjct: 361 AIYGDLRELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAR 420
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG----------------------- 713
E +C +P +L A ++IL GDH QL P + K +++
Sbjct: 421 EAQCWIP-LLAASKVILAGDHLQLPPTIKSKVSSKPSEGNSVLRDQTDLDTNDLSKLDMR 479
Query: 714 -LSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
L +LF+RL+ L GI+ L QYRMH + FPS+ YE L ER L
Sbjct: 480 NLEITLFDRLLSLHGPGIKRM-LTTQYRMHQMIMDFPSHELYESKLIAAGAVKERLLK-- 536
Query: 770 DFPWPVPD-----KPMLFYVTQGQE--EIAGSGT----------SYVNRTEASNVEKITT 812
D P+ V + +P++FY TQG + E + T S N EA+ V +
Sbjct: 537 DLPYEVEETDDTREPLIFYDTQGGDFPEKSPDSTGILAKSVLVESKCNDMEAAVVARHVE 596
Query: 813 RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
+ + G++P+ I VITPY Q A L Q ++ + + +E+ SVD FQGREK+ ++
Sbjct: 597 KLVSAGVRPDDIAVITPYNAQVALLSQLLKEK-------FPTLELGSVDGFQGREKEAVV 649
Query: 873 MSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP-KVLSKQPLWNNLLNFYKE 928
+S VRSN +GFL + RRLNVA+TR + + V G+ V S P L F +E
Sbjct: 650 VSLVRSNLDHEVGFLGEKRRLNVAMTRPRRHLCVCGDSVTVSSGSPFLKRWLAFLEE 706
>gi|255013517|ref|ZP_05285643.1| putative helicase [Bacteroides sp. 2_1_7]
gi|410103629|ref|ZP_11298550.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
gi|409236358|gb|EKN29165.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
Length = 640
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 241/457 (52%), Gaps = 36/457 (7%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LNRSQ AV + + +S++ GPPGTGKT T +Y+ + + V+VCA SN A
Sbjct: 185 FPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VIVCAQSNTA 243
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD ++EK+ G+ V+R+ +R D +SF ++ +R+++ N
Sbjct: 244 VDCISEKLVDRGINVLRIGNPTR-INDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSN 302
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
KK + ++ S + R L+ + L D A V+ CT VG+ + ++ F
Sbjct: 303 MR-KKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
++ IDE+ QA E C + I A ++IL GDH QL P + C +A R GL ++L +++
Sbjct: 362 TLFIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT 420
Query: 726 GIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
L ++QYRMH ++ +F S +FY L++ R + ++D P D +
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT 480
Query: 785 TQGQEEIAGSGTSYVNRTEA--------SNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+EE S VNR EA S ++KI+ R + G+I+PY+ Q +
Sbjct: 481 ENTREETM----SRVNRQEAELLVEQLRSYIQKISKE--RVLEENIDFGLISPYKAQVQY 534
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
++ + Q + + + I + +VD FQG+E+D+I++S VR+N+ IGFLND RR+NVA
Sbjct: 535 -IRKLIKQDAFFKPLRRLITIHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVA 593
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
+TRA+ ++++G+ L++ +N L N+ ++ ++
Sbjct: 594 ITRARMKLMILGDASTLTRHAFYNELYNYISQRGKII 630
>gi|300727419|ref|ZP_07060828.1| DNA helicase [Prevotella bryantii B14]
gi|299775299|gb|EFI71898.1| DNA helicase [Prevotella bryantii B14]
Length = 614
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 248/470 (52%), Gaps = 59/470 (12%)
Query: 497 FSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+ P LN SQ AV + + + ++ GPPGTGKT T + + + + VLVCA
Sbjct: 162 FAPTRFPWLNPSQEKAVNEVLWAKDVEVVHGPPGTGKTTTLVEAINETLMRENQ-VLVCA 220
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD + EK+ G+ V+R+ ++ + +SF R E + + +L ++
Sbjct: 221 QSNMAVDWICEKLVDRGINVLRIGNPTK-VNEQMLSF----TYERRFEAHPDYPQLWAIR 275
Query: 616 EETGELSS---ADEKRYRM----LKKNAEK-------SLLDNADVICCTCVGAGDPRLLK 661
+ +L S + RY LK A + L A VI T VG+ + L
Sbjct: 276 KTIRQLRSQKKGRDDRYHQKLEHLKARATELEIRINTQLFGEARVIASTLVGSANRILEG 335
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
KF ++ IDE+ QA E C +P + A ++IL GDHCQL P + A +AGL ++L ER
Sbjct: 336 QKFGTLFIDEAAQALEAACWIP-MRRATRVILAGDHCQLPPTIKSLAALKAGLGKTLMER 394
Query: 722 LV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV- 775
+V V+ + L+VQYRM+ ++ +F SN+FY G ++ R + +D+ P+
Sbjct: 395 IVENKPEVVTL----LKVQYRMNEQIMQFSSNYFYHGEVETAPQIKYRGI--LDYEDPMM 448
Query: 776 ----------PDKPMLFYVTQGQEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKP 821
PD+P +E+ G VN+ EA +E+ + + +
Sbjct: 449 WIDTSEIEVGPDEPSF------KEQFIGENFGRVNKGEAELTLRTLEEYFQKIGKTRILD 502
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E I G+I+PY Q +L + ++ + K Y++ I V +VD FQG+E+D+I++S VR+
Sbjct: 503 ENIDVGIISPYRAQVQYLKKLIRKREFF--KPYRKFISVNTVDGFQGQERDIILISMVRA 560
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
ND IGFLND RR+NVA+TRA+ +I++GN + +SK P ++ L N+ +E
Sbjct: 561 NDDGQIGFLNDLRRMNVAITRARMKLIILGNAQTMSKHPFYHQLWNYIQE 610
>gi|6322835|ref|NP_012908.1| Hcs1p [Saccharomyces cerevisiae S288c]
gi|465704|sp|P34243.1|HCS1_YEAST RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|395256|emb|CAA52266.1| unnamed protein product [Saccharomyces cerevisiae]
gi|486007|emb|CAA81852.1| DIP1 [Saccharomyces cerevisiae]
gi|151941528|gb|EDN59891.1| DNA helicase A [Saccharomyces cerevisiae YJM789]
gi|285813242|tpg|DAA09139.1| TPA: Hcs1p [Saccharomyces cerevisiae S288c]
gi|392298121|gb|EIW09219.1| Hcs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 683
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 284/566 (50%), Gaps = 89/566 (15%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKST---SFDRMQLALRKFAVDD 468
G V K+ D ++ + L+ S +S +I K+T +++RM+ +RK +
Sbjct: 117 GVVYKMSDT---QITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLS--- 170
Query: 469 QSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSL 523
+S+ I +++ + V+E R +P S N+ P+LN SQ A+ AI L++
Sbjct: 171 -EISSPIQDKIIQYLVNE---RPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAINNDLTI 226
Query: 524 IQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLTEKIH---------RTGL 573
I GPPGTGKT T ++ QL +K +L+C PSNI+VD + E++ R G
Sbjct: 227 IHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGH 286
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR----- 628
+ + R ++D L+ N I +++ E+ KL+Q E +L + +++
Sbjct: 287 PARLLDSNKRHSLD----ILSKKNTIVK-DISQEIDKLIQ---ENKKLKNYKQRKENWNE 338
Query: 629 YRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK--------FHSILIDESM 673
++L+K+ +K L+ + ++ T G+ L + F +++IDE
Sbjct: 339 IKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVS 398
Query: 674 QATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCK--KAARAGLSQSLFERLVVLGIR 728
QA EP+C +P+I Q L+L GD+ QL P + + K L +LF+R++ I
Sbjct: 399 QAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIF 456
Query: 729 PFR-----LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDK- 778
P R L VQYRM+ ++ +FPS+ Y G L R L ID P P D
Sbjct: 457 PKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDD 514
Query: 779 ----PMLFYVTQGQE--EIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
P+++Y TQG E E A T S N E + V++ + IGVI+P
Sbjct: 515 DTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISP 574
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q + L + + + L +IE+++VD FQGREKD+II+S VRSN+ +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSK 915
RRLNVA+TR + ++V+GN +VL +
Sbjct: 630 ERRLNVAMTRPRRQLVVVGNIEVLQR 655
>gi|378756061|gb|EHY66086.1| hypothetical protein NERG_00782 [Nematocida sp. 1 ERTm2]
Length = 1370
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 238/458 (51%), Gaps = 72/458 (15%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN+SQ AV A+++ ++LIQGPPGTGKT T ++++ + Q VLVCAPSN AVD L
Sbjct: 924 LNKSQQVAVSTALKKNITLIQGPPGTGKTKTVSSMIAYFLLQ-NCRVLVCAPSNAAVDML 982
Query: 565 TE-----------KIHRTGLKVVRVCAKSREAI-----------DSPVSFLALHNQIRNM 602
E K R + R+C + EA+ +SP +++ Q
Sbjct: 983 VESGSIWKTIPDCKWIRISISGNRICDEGDEAVVNKGELMENLQNSPSLVQSINVQTTPN 1042
Query: 603 EMNSELKKLLQLKEETGE----------LSSADEK--RYRMLKKNAEKSLLDNADVICCT 650
+++ K L+ E+T E S+A++K R + K ++ A ++ CT
Sbjct: 1043 NYSTDPKNKLK-TEKTRESEHTSPNVSYTSTANDKFASVREPSRKENKDEINRAQLVFCT 1101
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
AG + F ++IDE+ QATEP ++P+ ++ILVGD QL P ++ +
Sbjct: 1102 LSMAGSSVFNQSPFDVLIIDEACQATEPSTLIPLRTAPTRIILVGDPMQLPPTIISQSK- 1160
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
LS +LFERL I P L+ QYRM+ +SKF S FYE L++GV +
Sbjct: 1161 --DLSVTLFERLSE-SITPILLDTQYRMNSIISKFASMQFYENRLRDGVSLES------- 1210
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
+ P F G EE G NR E + + + ++ + + +G+I+PY
Sbjct: 1211 ------ELPFAFIDASGTEETEGKDI--FNRKEINVILQFSSMAAKAY---DTVGIISPY 1259
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
+GQ L K+ + +++++VD FQG+EKD II+S VRS + IGFLND
Sbjct: 1260 KGQVGQL-----------KKVIKGMDISTVDGFQGQEKDCIIISTVRS---KKIGFLNDI 1305
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
RR+NVALTRA+Y +I++G+ +L + P W +L+ + +E
Sbjct: 1306 RRMNVALTRARYTVIIVGSMSLLQQDPTWKSLIKYVQE 1343
>gi|66826987|ref|XP_646848.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|60474984|gb|EAL72920.1| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2523
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 236/440 (53%), Gaps = 50/440 (11%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVK-QT 547
R +P + + +LN SQ AV+ ++ + ++LIQGPPGTGKT T ++ L+
Sbjct: 1579 RMEIPSLLRSMCIQELNTSQFSAVETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINP 1638
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
+LVC PS+ +VD++ + R KS ID L N +R
Sbjct: 1639 KFKILVCGPSHASVDEVAK----------RCLKKSLVNIDGKP---YLPNMVR------- 1678
Query: 608 LKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD-PRLLKIKFHS 666
+ KL + + +S D+ + K+++ NA +I T +G P K +
Sbjct: 1679 IGKLQNISPDCHRISLFDKTPAQ------RKAIIRNATIIFATLSASGSKPIRSNFKANI 1732
Query: 667 ILIDESMQATEPECMVPVILG-AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-V 724
+L+DES Q++EP ++P+ +G ++LILVGD QL P + ++A+ GL+ SLFERL V
Sbjct: 1733 VLVDESTQSSEPASLIPLCIGNIEKLILVGDPLQLPPTIFSSESAKNGLNISLFERLSKV 1792
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
L + L QYRMHP +S+FPSN FY+ L +G ++ +F + P+ FY
Sbjct: 1793 LPVE--MLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYD 1850
Query: 785 TQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRAFLV-Q 839
+E +G S N+ E + V +K+ + C K G+ITPY+ Q++ + Q
Sbjct: 1851 VIDSKEESGKR-SLKNKLEITMVFTLIKKLVQDYPEC--KKFSFGIITPYKLQKSEIKEQ 1907
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
H Q+ L IE +++D QG EKD+II+SCVRS + IGFL+D RR+NVALTR
Sbjct: 1908 HKQFNYPL------NIETSTIDGVQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTR 1958
Query: 900 AKYGIIVIGNPKVLSKQPLW 919
AK+G+ VIGN K+L K W
Sbjct: 1959 AKFGLFVIGNSKLLKKDRTW 1978
>gi|115372685|ref|ZP_01459992.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|310823878|ref|YP_003956236.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|115370406|gb|EAU69334.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|309396950|gb|ADO74409.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
Length = 640
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 164/514 (31%), Positives = 237/514 (46%), Gaps = 51/514 (9%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+D + +++RM+ L + D+ V LLG+ K AP
Sbjct: 125 LRLDVVPNDVTYERMRAGLARVKALDKGVERRRREVLLGNEP------PRFEKPSDAPPS 178
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
LN Q AV A+ L+ GPPGTGK+ A + Q V + G +L A SN AV
Sbjct: 179 RPLNPEQADAVSRALAAEDFFLVHGPPGTGKSTVLAEVAVQAVAR-GERLLCTAASNAAV 237
Query: 562 DQLTEKIHRTGLKVVRVCAK------------------------SREAIDSPVSFLALHN 597
D L E GL+ +RV SRE D S
Sbjct: 238 DHLLELCLEQGLRAIRVGHPARVAPRFQEHTLDIVVEEHPDRVLSRELFDEAFSLFGYAR 297
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
+ R + E + + T E + R L++ A +++L+ A VIC T G
Sbjct: 298 RQRTQGRSRE--RFSNARSSTAEAKGLMDD-ARALERKAVRAVLERAQVICVTLASLGSG 354
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
L +F LIDE+ QATEP ++ L A +L+L GD QL P V+ ++AA+AGL S
Sbjct: 355 VLAHEEFDRALIDEATQATEPLTLLG-FLRAPKLVLAGDPQQLPPTVLSQEAAKAGLGVS 413
Query: 718 LFERLVV---LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
LFERL+ G++ L QYRM+ + FPS Y G+L+ ER L+ + P
Sbjct: 414 LFERLLQDHGEGVKRM-LREQYRMNARIMDFPSREMYGGALRAHPSVAERTLAPVLSPGA 472
Query: 775 VPDKP-MLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
D P +LF T G +E+ S S N EA + + G+ P ++ VI PY
Sbjct: 473 ELDAPPVLFLDTAGKGFEEQEEESTHSLFNPGEADLILARVKALLAAGLSPRELAVIAPY 532
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L + ++ + ++EV +VDAFQGREKD I++S RSN +GFL D
Sbjct: 533 SAQAFHLRERVEI-------LSPDVEVDTVDAFQGREKDAILVSLTRSNADGNLGFLTDL 585
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
RR+NVA+TRA+ + V+G+ LS P + +
Sbjct: 586 RRMNVAMTRARRHLFVVGDSATLSGHPFYARFIE 619
>gi|365984191|ref|XP_003668928.1| hypothetical protein NDAI_0C00240 [Naumovozyma dairenensis CBS 421]
gi|343767696|emb|CCD23685.1| hypothetical protein NDAI_0C00240 [Naumovozyma dairenensis CBS 421]
Length = 699
Score = 214 bits (546), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 180/566 (31%), Positives = 278/566 (49%), Gaps = 80/566 (14%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATT----GFSVDFIWKST---SFDRMQLALRKF 464
G + KI D ++ + L S+ P E T F+ ++ K+T ++ RM+ +RK
Sbjct: 124 GTIFKISDQ---QITIALNESSQEPQENITTKLYSFNRLYLLKTTNTITYKRMESTMRKL 180
Query: 465 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL----PDLNRSQVYAVKHAIQRP 520
+ + S I LL R L + S+ N+ +LN+SQ A+K A+
Sbjct: 181 SEFEGIPSNKIIQYLLNE-------RPFLKQTTSSNNIQFHNENLNQSQREAIKFALIND 233
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH---------RT 571
+S+I GPPGTGKT T ++ QLV++ G +LVC PSNI+VD + E+++ R
Sbjct: 234 ISIIHGPPGTGKTYTLIELIQQLVER-GQRILVCGPSNISVDTILERLNGVLPGNLLLRI 292
Query: 572 GLKVVRVCAKSREAID----SPVSFLALHNQIRNMEMN-SELKKLLQLKEETGELSSADE 626
G + + R ++D S + + + +++ S +KKL K++ E
Sbjct: 293 GHPARLLDSNLRHSLDILSKSGDAGAIVKDIYHDIDKTISGIKKLKSYKDKRESWKEVKE 352
Query: 627 --KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK--------FHSILIDESMQAT 676
K R+ ++ L+ A V+ T G+ L K+ F +++IDE Q+
Sbjct: 353 LRKELRIRERKVINDLILEAKVVVATLHGSSSRDLCKLYNDESVTSLFDTLIIDEVSQSL 412
Query: 677 EPECMVPVILGAK----QLILVGDHCQLGPVVMCK--KAARAGLSQSLFERLVVLGIRPF 730
EP+C +P+I K +L+L GD+ QL P + + K + L +LF+RLV + F
Sbjct: 413 EPQCWIPLISHYKSDISKLVLAGDNKQLPPTIKTEDNKLVQKLLQTTLFDRLVSIYGDQF 472
Query: 731 R--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLFYVTQ 786
R L VQYRM+ E+ +F SN YEG L V LS + D P+++Y TQ
Sbjct: 473 RKLLNVQYRMNEEIMEFSSNEMYEGKLLADVTVASHLLSDLSGVDSNEDTDIPLIWYDTQ 532
Query: 787 G---QEEIAGS--------------GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
G E ++ S +S N EA V+ + I + E IG+I+P
Sbjct: 533 GDEFMESVSDSNTNNNNNNNNNNPLASSKFNENEALVVKDHVEKLIASNVPQECIGIISP 592
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q L SL Y IE+++VD FQGREK++II+S VRSND +GFL+D
Sbjct: 593 YSAQVNLL-------KSLIRTDYPLIEISTVDGFQGREKEVIILSLVRSNDKFEVGFLSD 645
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSK 915
RRLNVA+TR K + V+GN + L +
Sbjct: 646 DRRLNVAMTRPKRQLCVVGNIECLQR 671
>gi|218194850|gb|EEC77277.1| hypothetical protein OsI_15909 [Oryza sativa Indica Group]
Length = 980
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 211/406 (51%), Gaps = 48/406 (11%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ H+ ++
Sbjct: 533 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKA-------------HHSVK 579
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
+ M+ L+Q K + SS +R S+LD A ++ T +G
Sbjct: 580 AVSMD----YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFS 635
Query: 661 KIK--FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
++ F ++IDE+ QA EP ++P+I G KQ+ LVGD QL V+ A + G SL
Sbjct: 636 RMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSL 695
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
F+R G L++QYRMHPE+S FPS FYEG L++G +++ PW
Sbjct: 696 FKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSC 749
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PE-----QIGVITPY 830
P F+ G E S+VN E VE IT + + M+ PE Q+ VI+PY
Sbjct: 750 FGPFCFFDVDGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPY 806
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L H ++ + + + I+V +VD FQGREK+++I SCVR N Q IGF++D
Sbjct: 807 RHQVKLLKDH--FRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQKIGFVSDF 864
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
RR+NVA+TRA+ ++V+G+ L + WNNL+ KE+ + P
Sbjct: 865 RRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVP 910
>gi|190409806|gb|EDV13071.1| DNA helicase A [Saccharomyces cerevisiae RM11-1a]
gi|207343464|gb|EDZ70918.1| YKL017Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147817|emb|CAY81067.1| Hcs1p [Saccharomyces cerevisiae EC1118]
gi|323332808|gb|EGA74213.1| Hcs1p [Saccharomyces cerevisiae AWRI796]
Length = 683
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 284/566 (50%), Gaps = 89/566 (15%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKST---SFDRMQLALRKFAVDD 468
G V K+ D ++ + L+ S +S +I K+T +++RM+ +RK +
Sbjct: 117 GVVYKMSDT---QITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLS--- 170
Query: 469 QSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSL 523
+S+ I +++ + V+E R +P S N+ P+LN SQ A+ AI L++
Sbjct: 171 -EISSPIQDKIIQYLVNE---RPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAINNDLTI 226
Query: 524 IQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLTEKIH---------RTGL 573
I GPPGTGKT T ++ QL +K +L+C PSNI+VD + E++ R G
Sbjct: 227 IHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGH 286
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR----- 628
+ + R ++D L+ N I +++ E+ KL+Q E +L + +++
Sbjct: 287 PARLLDSNKRHSLD----ILSKKNTIVK-DISQEIDKLIQ---ENKKLKNYKQRKENWNE 338
Query: 629 YRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK--------FHSILIDESM 673
++L+K+ +K L+ + ++ T G+ L + F +++IDE
Sbjct: 339 IKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVS 398
Query: 674 QATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCK--KAARAGLSQSLFERLVVLGIR 728
QA EP+C +P+I Q L+L GD+ QL P + + K L +LF+R++ I
Sbjct: 399 QAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIF 456
Query: 729 PFR-----LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDK- 778
P R L VQYRM+ ++ +FPS+ Y G L R L ID P P D
Sbjct: 457 PKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDD 514
Query: 779 ----PMLFYVTQGQE--EIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
P+++Y TQG E E A T S N E + V++ + IGVI+P
Sbjct: 515 DTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISP 574
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q + L + + + L +IE+++VD FQGREKD+II+S VRSN+ +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSK 915
RRLNVA+TR + ++V+GN +VL +
Sbjct: 630 ERRLNVAITRPRRQLVVVGNIEVLQR 655
>gi|19115031|ref|NP_594119.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe 972h-]
gi|2842700|sp|Q92355.1|SEN1_SCHPO RecName: Full=Helicase sen1
gi|1644322|emb|CAB03612.1| ATP-dependent 5' to 3' DNA/RNA helicase Sen1 [Schizosaccharomyces
pombe]
Length = 1687
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 262/550 (47%), Gaps = 113/550 (20%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLV---------------KQTG 548
+N Q A+ A+ +LIQGPPGTGKT T I+ L+ K T
Sbjct: 1130 VNEPQAKAIMCALDNNGFTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKSTE 1189
Query: 549 SP--VLVCAPSNIAVDQLTEKIHRTGL---------KVVRVCAKSREAIDSPVSFLALHN 597
S +L+CAPSN AVD++ ++ R L +VVR+ + E I+ V L+L
Sbjct: 1190 SKQQILLCAPSNAAVDEVLLRLKRGFLLENGEKYIPRVVRI--GNPETINVSVRDLSLEY 1247
Query: 598 QIRN--MEMN-------------------------------------------SELKKLL 612
Q +E+N L K L
Sbjct: 1248 QTEKQLLEVNQGAIDLGSLQELTRWRDTFYDCIQKIEELEKQIDVARDVAEDTKSLGKEL 1307
Query: 613 QLK-----------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL- 660
Q K EE S K +L+K A+K++L ADV+C T G+G +
Sbjct: 1308 QNKINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAH 1367
Query: 661 -KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ F +++IDE+ QA E + ++P+ GAK+ ILVGD QL P V+ KKAA SQSLF
Sbjct: 1368 SSLNFSTVIIDEAAQAVELDTIIPLRYGAKKCILVGDPNQLPPTVLSKKAASLNYSQSLF 1427
Query: 720 ERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
R+ + L +QYRMHP++S FPS FY+ L++G + K W V K
Sbjct: 1428 VRIQKNFSNQMCLLSIQYRMHPDISHFPSKKFYDSRLEDG----DNMAEKTQQVWHVNPK 1483
Query: 779 PMLF--YVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRFIRCGMKPEQIGVITPYEG 832
+ + +G+E + + ++Y N E + V+++ +F +IGVITPY
Sbjct: 1484 FTQYRLFDVRGKERTSNTMSTY-NLEEVEYLVNMVDELLNKFPDVNFTG-RIGVITPYRS 1541
Query: 833 Q-----RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
Q RAF V++ + I++ +VD FQG+EKD+I SCV+S GIGFL
Sbjct: 1542 QLHELRRAFKVKYGK-------SFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFL 1594
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILF 947
D RRLNVALTRA+ +++IGN + L LW +L++ +K LVE P + + LI
Sbjct: 1595 RDFRRLNVALTRARSSLLIIGNMETLKTDDLWGSLVDDALSRK-LVESPHIDSEGRLITI 1653
Query: 948 SKPKQYFKKN 957
S+ + KN
Sbjct: 1654 SRTSEKRMKN 1663
>gi|365991108|ref|XP_003672383.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
gi|343771158|emb|CCD27140.1| hypothetical protein NDAI_0J02480 [Naumovozyma dairenensis CBS 421]
Length = 2238
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 262/534 (49%), Gaps = 117/534 (21%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVY--------------------- 541
+LN SQ A+ H + SLIQGPPGTGKT T IV
Sbjct: 1302 NLNTSQAEAIVHTVSNEGFSLIQGPPGTGKTKTILGIVGYFLSTRKILSSNIIKTPTDGS 1361
Query: 542 -----QLVKQTGSPVLVCAPSNIAVDQLTEKIH----------------RTGLK-VVRVC 579
QL+K+ VL+CAPSN AVD++ ++ R G VV V
Sbjct: 1362 KLSIDQLLKKQK--VLICAPSNAAVDEICIRLKEGVYDKNGRLFKPNLVRIGRSDVVNVA 1419
Query: 580 AKS---REAIDSPVS---------------FLA-------LHNQIRNMEMNS-------E 607
K+ E +D V+ F + L Q+ N E + E
Sbjct: 1420 IKNLTLEELVDRKVAEKNYEFTMDPDLERNFSSSVSKRRELRAQLNNAETATTSTLSTEE 1479
Query: 608 LKKL-LQLKE-------------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
+ KL L+++E E E +S + + + ++NA+ +L N++VIC T G
Sbjct: 1480 IAKLQLEIRELSKVINDLGKKKDELRERNSVNHRNRDLDRRNAQAQILANSEVICSTLSG 1539
Query: 654 AGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
A L L IKF ++++DE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1540 AAHDVLATLGIKFDTVIVDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASN 1599
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD--ERKLSKI 769
+QSLF R+ P+ L VQYRMHP++SKFPS FY+G L++G D R+
Sbjct: 1600 FKYNQSLFVRMEK-NSSPYLLNVQYRMHPDISKFPSEEFYQGKLKDGPSMDIINRR---- 1654
Query: 770 DFPWP--VPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE--- 822
PW VP P F+ ++ G+++ SYVN E +E + F K +
Sbjct: 1655 --PWHQMVPFAPYKFFDISTGKQQQNSKTMSYVNLEEIQVAIELVDKLFNEFDAKIDFTG 1712
Query: 823 QIGVITPYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND 880
+IGVI+PY Q +Q M ++ I + I+ ++D FQG+EK++I++SCVR++D
Sbjct: 1713 KIGVISPYREQ----MQRMRREFTRYFGGSISKSIDFNTIDGFQGQEKEIILISCVRADD 1768
Query: 881 HQ-GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
+ +GFL D RR+NVA TRAK + ++G+ + L K LW +L+N + + LV
Sbjct: 1769 TKTSVGFLKDFRRMNVAFTRAKTSMWILGHQQSLLKNKLWKHLINDARSRDCLV 1822
>gi|329961517|ref|ZP_08299598.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
gi|328531729|gb|EGF58558.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
Length = 627
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 241/470 (51%), Gaps = 49/470 (10%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQT 547
FR P F P LN +Q AV + + ++++ GPPGTGKT T +Y+ + +
Sbjct: 178 FRELYPVRF-----PWLNSTQETAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE 232
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
VLVCA SN AVD ++EK+ G+ V+R+ +R D +SF R E +
Sbjct: 233 -PQVLVCAQSNTAVDWISEKLIDRGVNVLRIGNPTR-VNDKMLSF----TYERRFEGHPL 286
Query: 608 LKKLLQLKEETGELS------SADEK---RYRM---------LKKNAEKSLLDNADVICC 649
+L +++ ELS + DE+ R RM L+ L D A VI
Sbjct: 287 YTELWSIRKNLRELSGRSRRGNYDEREGIRNRMSRLRDRATALEIQINADLFDGAHVIAS 346
Query: 650 TCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
T V + L +F ++ IDE+ QA E C + I A +++L GDHCQL P + C +A
Sbjct: 347 TLVSSNHRLLNGHRFGTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCHEA 405
Query: 710 ARAGLSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
AR GL ++L E++V +P L+VQYRMH ++ KF S +FY G L+ R +
Sbjct: 406 ARGGLERTLMEKVV--SSKPSTVSLLKVQYRMHEDIMKFSSQWFYNGELEAAPEVRCRGI 463
Query: 767 SKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMKPE 822
D P D + + +EE G +N+ EA+ ++ TR + E
Sbjct: 464 LDWDSPISWIDTSDMDF----KEEFVGETFGRINKDEANLLLQELKSYITRIGSNRILEE 519
Query: 823 QI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQEI-EVASVDAFQGREKDLIIMSCVRSN 879
+I G+I+PY Q +L ++ SL K Y+ + V +VD FQG+E+D+I +S VR+N
Sbjct: 520 RIDFGIISPYRAQVQYLRNKIKTDASL--KPYRSLLTVNTVDGFQGQERDVIFISLVRAN 577
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+ IGFLND RR+NVA+TRA+ ++++G LS + L+ + ++
Sbjct: 578 EEGQIGFLNDLRRMNVAITRARMKLVILGEAATLSHHSFYRKLMEYISKE 627
>gi|212526278|ref|XP_002143296.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210072694|gb|EEA26781.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 713
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 168/561 (29%), Positives = 268/561 (47%), Gaps = 91/561 (16%)
Query: 444 SVDFIW----------KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL 493
SVD +W + R+ + K +S Y L GH
Sbjct: 163 SVDDLWGKKLWLVKLANDVTHRRLNQTMEKMGKMSESEHTYFMRVLFGHTTPSS------ 216
Query: 494 PKHFSAPNL----PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTG 548
P + + + P LN SQ A++ A+ + ++LI GPPGTGKT T ++ Q+ ++
Sbjct: 217 PDYDAIGTVDFIDPTLNDSQKEAIRFALASKEIALIHGPPGTGKTHTLIELILQMTRRD- 275
Query: 549 SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRN 601
+LVC PSN++VD + E++ + +VRV +R +D + L ++ +R+
Sbjct: 276 MRILVCGPSNVSVDNIVERLTPHKVPIVRVGHPARLLPSVLDHSLEVLTQTSEAAEIVRD 335
Query: 602 M-----EMNSELKKLLQLKEET---GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
+ E + ++K +E G+L K +R + ++L+ + V+ T G
Sbjct: 336 VRKEIDEKQASIRKTRNGRERREIYGDLKEL-RKEFRERESKCVENLVTGSKVVLATLHG 394
Query: 654 AGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC------- 706
AG +L KF ++IDE+ QA E +C +P +L A + +L GDH QL P +
Sbjct: 395 AGGHQLKNQKFDVVIIDEASQALEAQCWIP-LLTASRAVLAGDHLQLPPTIKSTNIDAKK 453
Query: 707 ----------KKAARA----GLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFF 750
K ++ + L +++F+RL+ L + L QYRMH ++ +FPSN
Sbjct: 454 ISKSKAKEAEKDSSESLKGVSLEKTMFDRLLALHGPSIKRMLTTQYRMHEKIMQFPSNEL 513
Query: 751 YEGSLQNGVCADERKLSKI-DFPWPVPD-----KPMLFYVTQGQ--------EEIAGSG- 795
YEG L + AD K + D P+ V + +P++F TQG E+ A G
Sbjct: 514 YEGKL---IAADSVKGRLLKDLPYGVEETDDTKEPLVFIDTQGDDFPEKAEDEDTAVKGG 570
Query: 796 ---TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
S N EA + I G++PE I V+TPY Q A + Q ++ + Y
Sbjct: 571 PISESKSNEMEARIAIRHVEGLIDAGVRPEDIAVVTPYNAQVALIAQSLKEK-------Y 623
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
IE+ SVD FQGREK+ I++S VRSN+ +GFL + RRLNVA+TR K + V G+ +
Sbjct: 624 PGIEIGSVDGFQGREKEAIVVSLVRSNEKHEVGFLGEKRRLNVAMTRPKRHLCVCGDSET 683
Query: 913 LSK-QPLWNNLLNFYKEQKVL 932
+SK N ++F +E L
Sbjct: 684 ISKGSKFLKNWMSFLEEHADL 704
>gi|218201695|gb|EEC84122.1| hypothetical protein OsI_30457 [Oryza sativa Indica Group]
Length = 981
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 241/462 (52%), Gaps = 48/462 (10%)
Query: 504 DLNRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
D + SQ+ A+ + +RP+ +IQGPPGTGKT + ++ V++ G VLV APSN AV
Sbjct: 504 DFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRK-GERVLVTAPSNAAV 562
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI-RNMEM--------NSELKKLL 612
D + EK+ TGL VRV +R I V+ +L + R ++ S+L+K L
Sbjct: 563 DNMVEKLSDTGLDTVRVGNPAR--ISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDL 620
Query: 613 QLKEETGELSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK-F 664
+ + L++ + + L KN +K +L NADV+ T +GA DP + +I F
Sbjct: 621 KHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCF 680
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
++IDE+ QA EP C +P++ G K+ IL GD QL PVV+ ++A + GL+ SL ER
Sbjct: 681 DLVIIDEAGQAIEPSCWIPILQG-KRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASS 739
Query: 725 LG--IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG------VCAD-----ERKLSKIDF 771
L + +L QYRMH ++ + SN Y+G L++ + AD E +++ F
Sbjct: 740 LHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVVSHLLADYPFIKETWITRCAF 799
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
P +E + +GT S+ N EA V + ++CG+ P I V +PY
Sbjct: 800 LLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQSPY 859
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQE---IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
Q L ++ Y E +EV+++D+FQGRE D +++S VRSN +GFL
Sbjct: 860 IAQVQLLRDRLED--------YPEASGVEVSTIDSFQGREADAVVISMVRSNTLGAVGFL 911
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
D RR+NVA+TRA+ + ++ + + LL ++
Sbjct: 912 GDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQH 953
>gi|150866204|ref|XP_001385714.2| hypothetical protein PICST_61353 [Scheffersomyces stipitis CBS
6054]
gi|149387460|gb|ABN67685.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 716
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 180/541 (33%), Positives = 266/541 (49%), Gaps = 95/541 (17%)
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC-HLPKHFSAPNLPDLNRSQ 509
S ++ R+ + K S YI LLG +V L + + N LN+SQ
Sbjct: 161 SITYKRLISTMNKLGEMGDSEKNYITRLLLGESVYSPLVKVTKMADDLFFNN--QLNQSQ 218
Query: 510 VYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK- 567
A+ A+ P+++I GPPGTGKT T ++ QLV G VLVC PSNI+VD + E+
Sbjct: 219 KDAISFAVNDSPITIIHGPPGTGKTYTLIELIKQLVFNHGEKVLVCGPSNISVDTILERL 278
Query: 568 --IHRTGLKVVRVCAKSR---EAIDSPVSFLALHN-----QIRNMEMNSELKKLLQLKEE 617
+ R GL +R+ +R + + L+ N N E+ +++K + E
Sbjct: 279 SPVFRGGL--IRIGHPARLLAGNLQHSLDILSKTNYGGGESSGNKEILRDIEK--DIGET 334
Query: 618 TGELSSADEKRY-----------------RMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
G++ + KRY R+ +K LL +ADVI T GAG L
Sbjct: 335 LGKIKKS--KRYAERRALWADLKVLKKELRVREKKIVSDLLLHADVILSTLHGAGAYELT 392
Query: 661 KIK-------------FHSILIDESMQATEPECMVPVI--LGAKQLILVGDHCQLGPVVM 705
+ F +I+IDE Q+ EP+C +P++ LG K+L++ GD+ QL P V
Sbjct: 393 SLYKEESQNFGADNPFFDTIIIDEVSQSLEPQCWIPLVNHLGFKRLVIAGDNMQLPPTVK 452
Query: 706 CK-------------KAARAGLSQSLFERLVV-LGIRPFR--LEVQYRMHPELSKFPSNF 749
K ++ A L +LF+RLV F+ L+ QYRM+ + KFPS
Sbjct: 453 SKDEIESLISSMSLEQSKVANLEHTLFDRLVQDHNGDAFKKLLDTQYRMNENIMKFPSRE 512
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPD----KPM-LFYVTQG-----------QEEIAG 793
YE L+ R +S +D V D + M ++Y TQG + +A
Sbjct: 513 LYEEKLRAHESV--RDISLLDLKG-VADSDETRAMCIWYDTQGGDFPEKSSDEDAKSLAD 569
Query: 794 SGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
S S N EA V + + + G+ PE IGVI+PY Q + L + +Q GS
Sbjct: 570 STGSKFNEMEALVVTQHIKKLLESGVAPEHIGVISPYNAQVSVLKKIIQKGGS------- 622
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
IE+++VD FQGREK++II+S VRSND++ IGFL D RRLNVA+TR K + VIG+ +++
Sbjct: 623 RIEISTVDGFQGREKEVIIISLVRSNDNREIGFLKDKRRLNVAMTRPKRQLCVIGDLELM 682
Query: 914 S 914
S
Sbjct: 683 S 683
>gi|86196492|gb|EAQ71130.1| hypothetical protein MGCH7_ch7g537 [Magnaporthe oryzae 70-15]
Length = 1986
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 261/536 (48%), Gaps = 117/536 (21%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV--KQTGSP----------- 550
LNR Q A+ +A + +L+QGPPGTGKT T +V L+ K + +P
Sbjct: 1276 LNRGQAAAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIKPANGAD 1335
Query: 551 ------VLVCAPSNIAVDQLTEKIHRTGLK----------VVRVCAKSREAIDSPVSFLA 594
+LVCAPSN AVD+L ++ + G+K V+R+ +AI++ V +
Sbjct: 1336 EPMAQKLLVCAPSNAAVDELVLRL-KAGIKDTNGNTHKINVLRLG--RSDAINAAVRDVT 1392
Query: 595 LHNQIR---------NMEMNSELKKLLQLKEETGEL---------------SSADEKRYR 630
L ++ N NS +L +E GE+ ++ D +
Sbjct: 1393 LDELVKEKMDAALNVNGSGNSGPTDREKLHQEAGEIKVRVAALREALEQARAAGDHGQTN 1452
Query: 631 MLKKN-----------------------------------AEKSLLDNADVICCTCVGAG 655
L++N ++S+L A V+C T GAG
Sbjct: 1453 SLQRNLDELRKKQGQIGAQIDRDKASGNTYAREAEIKRRNIQQSILSEAHVLCATLSGAG 1512
Query: 656 DP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
+ L+++F +++IDE+ Q E ++P+ GA + ILVGD QL P V+ + AAR G
Sbjct: 1513 HDMFKSLQVEFETVIIDEAAQCVELSALIPLKYGASKCILVGDPKQLPPTVLSQSAARYG 1572
Query: 714 LSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
QSLF R+ P + L+ QYRMHPE+S +PS FYEG L +G +D KL +
Sbjct: 1573 YDQSLFVRM--QQNHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADG--SDMAKLRQQ- 1627
Query: 771 FPWPVPDKPML----FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF-----IRCGMKP 821
PW D P+L F+ +G +E G S VN E + +I T+F MK
Sbjct: 1628 -PW--HDNPLLGPYRFFDVEGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMK- 1683
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+IG+ITPY+ Q L Q ++Q + ++IE + DAFQGRE ++II SCVR++
Sbjct: 1684 GKIGIITPYKAQLFALRQ--KFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPT 1741
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
GIGF+ D RR+NV LTRA+ + ++G+ + L + WN L+ K + +G +
Sbjct: 1742 GGIGFMTDIRRMNVGLTRARSSLWILGDSRALRQGEFWNKLIEDSKARDRYTQGSI 1797
>gi|150007774|ref|YP_001302517.1| helicase [Parabacteroides distasonis ATCC 8503]
gi|149936198|gb|ABR42895.1| putative helicase [Parabacteroides distasonis ATCC 8503]
Length = 640
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 240/457 (52%), Gaps = 36/457 (7%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LNRSQ AV + + +S++ GPPGTGKT T +Y+ + + V+VCA SN A
Sbjct: 185 FPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VIVCAQSNTA 243
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD ++EK+ G+ V+R+ +R D +SF ++ IR+++ N
Sbjct: 244 VDCISEKLVDRGINVLRIGNPTR-INDKMLSFTYERRFESHPDYPELWSIRKAIRDIQSN 302
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
KK + ++ S + R L+ + L D A V+ CT VG+ + ++ F
Sbjct: 303 MR-KKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
++ IDE+ QA E C + I A ++IL GDH QL P + C +A R GL ++L +++
Sbjct: 362 TLFIDEAAQALEAACWI-AISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT 420
Query: 726 GIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
L ++QYRMH ++ +F S +FY L++ R + ++D P D +
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT 480
Query: 785 TQGQEEIAGSGTSYVNRTEA--------SNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+EE S VNR EA S ++KI+ R + G+I+PY+ Q +
Sbjct: 481 ENTREETM----SRVNRQEAELLVEQLRSYIQKISKE--RVLEENIDFGLISPYKAQVQY 534
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
++ + Q + + + I V +VD FQG+E+D+I++S VR+N+ IGFLND RR+NVA
Sbjct: 535 -IRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVA 593
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
+TRA+ ++++G+ L++ + L N+ ++ ++
Sbjct: 594 ITRARMKLMILGDASTLTRHAFYKELYNYISQRGKII 630
>gi|317037841|ref|XP_001402440.2| DNA helicase [Aspergillus niger CBS 513.88]
Length = 714
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 165/521 (31%), Positives = 250/521 (47%), Gaps = 77/521 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL----PDLNRS 508
++ RM + K +S + GH LP + S L P LN S
Sbjct: 186 TYRRMNQTMEKMVKMAESEHTHFMRVAFGHT------SPMLPDYDSIGALEFTDPTLNDS 239
Query: 509 QVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
Q A++ A+ R ++LI GPPGTGKT T ++ Q+V Q VLVC PSNI+VD + E+
Sbjct: 240 QKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMV-QRKQRVLVCGPSNISVDNIVER 298
Query: 568 IHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSA 624
+ + VVR+ +R +D + L H + K++ Q + + +A
Sbjct: 299 LAPKKVPVVRIGHPARLLPSVLDHSLEVLT-HTSEAAAIVRDVRKEIDQKQASIRKTRAA 357
Query: 625 DEKR------------YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
E+R +R + ++L+ + V+ T GAG +L KF ++IDE+
Sbjct: 358 RERRAIYDDLRELRREFRERENKCVENLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEA 417
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA-------------------RAG 713
QA E +C +P +L A +++L GDH QL P V K
Sbjct: 418 SQALEAQCWIP-LLSASKVVLAGDHLQLPPTVKSTKENAKKAAKEKEDKKENGELLENVS 476
Query: 714 LSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
L +LF+RL+ + GI+ L QYRMH ++ +FPS+ Y+ L +R L D
Sbjct: 477 LETTLFDRLLSMHGPGIKRM-LTTQYRMHEKIMQFPSDELYDSKLMAADSVKDRLLK--D 533
Query: 771 FPWPVPD-----KPMLFYVTQGQE-----------EIAGSGTSYVNRTEASNVEKITTRF 814
P+ V + +P++F+ TQG + + A G S N EA V +
Sbjct: 534 LPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGESKSNDMEALVVSRHVDAL 593
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
+ G+ PE I VITPY GQ A L Q ++ + Y IE+ SVD FQGREK+ +++S
Sbjct: 594 VDAGIHPEDIAVITPYNGQLAVLSQMLREK-------YPSIELGSVDGFQGREKEAVVVS 646
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
VRSN +GFL + RRLNVA+TR K + + G+ + +SK
Sbjct: 647 LVRSNSEHEVGFLGERRRLNVAMTRPKRHLCICGDSETISK 687
>gi|389646651|ref|XP_003720957.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|351638349|gb|EHA46214.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae 70-15]
gi|440472216|gb|ELQ41092.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae Y34]
gi|440482178|gb|ELQ62693.1| DNA-binding protein SMUBP-2 [Magnaporthe oryzae P131]
Length = 2037
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 261/536 (48%), Gaps = 117/536 (21%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV--KQTGSP----------- 550
LNR Q A+ +A + +L+QGPPGTGKT T +V L+ K + +P
Sbjct: 1327 LNRGQAAAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIKPANGAD 1386
Query: 551 ------VLVCAPSNIAVDQLTEKIHRTGLK----------VVRVCAKSREAIDSPVSFLA 594
+LVCAPSN AVD+L ++ + G+K V+R+ +AI++ V +
Sbjct: 1387 EPMAQKLLVCAPSNAAVDELVLRL-KAGIKDTNGNTHKINVLRLG--RSDAINAAVRDVT 1443
Query: 595 LHNQIR---------NMEMNSELKKLLQLKEETGEL---------------SSADEKRYR 630
L ++ N NS +L +E GE+ ++ D +
Sbjct: 1444 LDELVKEKMDAALNVNGSGNSGPTDREKLHQEAGEIKVRVAALREALEQARAAGDHGQTN 1503
Query: 631 MLKKN-----------------------------------AEKSLLDNADVICCTCVGAG 655
L++N ++S+L A V+C T GAG
Sbjct: 1504 SLQRNLDELRKKQGQIGAQIDRDKASGNTYAREAEIKRRNIQQSILSEAHVLCATLSGAG 1563
Query: 656 DP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
+ L+++F +++IDE+ Q E ++P+ GA + ILVGD QL P V+ + AAR G
Sbjct: 1564 HDMFKSLQVEFETVIIDEAAQCVELSALIPLKYGASKCILVGDPKQLPPTVLSQSAARYG 1623
Query: 714 LSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
QSLF R+ P + L+ QYRMHPE+S +PS FYEG L +G +D KL +
Sbjct: 1624 YDQSLFVRM--QQNHPGKVHLLDCQYRMHPEISLYPSKEFYEGLLADG--SDMAKLRQQ- 1678
Query: 771 FPWPVPDKPML----FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF-----IRCGMKP 821
PW D P+L F+ +G +E G S VN E + +I T+F MK
Sbjct: 1679 -PW--HDNPLLGPYRFFDVEGIQERGSRGQSLVNTNEINVAIQIYTKFQADYASSIDMK- 1734
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+IG+ITPY+ Q L Q ++Q + ++IE + DAFQGRE ++II SCVR++
Sbjct: 1735 GKIGIITPYKAQLFALRQ--KFQERWGEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPT 1792
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
GIGF+ D RR+NV LTRA+ + ++G+ + L + WN L+ K + +G +
Sbjct: 1793 GGIGFMTDIRRMNVGLTRARSSLWILGDSRALRQGEFWNKLIEDSKARDRYTQGSI 1848
>gi|115478052|ref|NP_001062621.1| Os09g0130800 [Oryza sativa Japonica Group]
gi|113630854|dbj|BAF24535.1| Os09g0130800 [Oryza sativa Japonica Group]
gi|215694894|dbj|BAG90085.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641090|gb|EEE69222.1| hypothetical protein OsJ_28445 [Oryza sativa Japonica Group]
Length = 981
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 241/462 (52%), Gaps = 48/462 (10%)
Query: 504 DLNRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
D + SQ+ A+ + +RP+ +IQGPPGTGKT + ++ V++ G VLV APSN AV
Sbjct: 504 DFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRK-GERVLVTAPSNAAV 562
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI-RNMEM--------NSELKKLL 612
D + EK+ TGL VRV +R I V+ +L + R ++ S+L+K L
Sbjct: 563 DNMVEKLSDTGLDTVRVGNPAR--ISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDL 620
Query: 613 QLKEETGELSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK-F 664
+ + L++ + + L KN +K +L NADV+ T +GA DP + +I F
Sbjct: 621 KHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCF 680
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
++IDE+ QA EP C +P++ G K+ IL GD QL PVV+ ++A + GL+ SL ER
Sbjct: 681 DLVIIDEAGQAIEPSCWIPILQG-KRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASS 739
Query: 725 LG--IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG------VCAD-----ERKLSKIDF 771
L + +L QYRMH ++ + SN Y+G L++ + AD E +++ F
Sbjct: 740 LHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAF 799
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
P +E + +GT S+ N EA V + ++CG+ P I V +PY
Sbjct: 800 LLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGVSPTAIAVQSPY 859
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQE---IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
Q L ++ Y E +EV+++D+FQGRE D +++S VRSN +GFL
Sbjct: 860 IAQVQLLRDRLED--------YPEASGVEVSTIDSFQGREADAVVISMVRSNTLGAVGFL 911
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
D RR+NVA+TRA+ + ++ + + LL ++
Sbjct: 912 GDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQH 953
>gi|294506246|ref|YP_003570304.1| DNA helicase [Salinibacter ruber M8]
gi|294342574|emb|CBH23352.1| Putative DNA helicase [Salinibacter ruber M8]
Length = 766
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 172/571 (30%), Positives = 255/571 (44%), Gaps = 107/571 (18%)
Query: 438 EATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHF 497
E +G VD + RMQ AL + D ++ + +V P
Sbjct: 214 EVVSGLRVDLYVNDIPYQRMQDALAQLPTADGALK----------QLRDVSTGVASPAAT 263
Query: 498 SAPNLPD-----LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
+ D LN +Q AV+ A+ + LI GPPGTGKT T+ ++ Q V + G V
Sbjct: 264 EPATIDDWHNSALNDAQRRAVRKAVATDDVHLIHGPPGTGKTTTATEVLQQCVDR-GESV 322
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPV-------------- 590
L A SN AVD + + G VVR+ +R +D+ +
Sbjct: 323 LATAASNTAVDNVVAFLAEQGTDVVRLGHPARVNDRLRTHTLDAQIEDTDTHRRSQQKRE 382
Query: 591 -SFLALHNQ----------IRNM--------------------EMNSELKKLLQLKEETG 619
+F L Q R M E E+ L L+E
Sbjct: 383 KAFAVLDRQEDLTAPSGRWRRGMSDRKIKERAEQGRGSRGVPPERIEEMAAWLALQERAD 442
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
L E L++ A +L ADV+C T AG L F +++IDE+ QAT P
Sbjct: 443 ALFDEAE----ALEQEAIDEVLRAADVVCSTNSTAGSDLLDGHTFDTLVIDEATQATAPS 498
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV---------VLGIRPF 730
C +P + A++ +LVGDH QL P + ++AAR GL ++LFERL IR
Sbjct: 499 CWIP-MTHARRAVLVGDHKQLPPTIQNQEAARRGLRRTLFERLAHHHETAPESPGSIRSL 557
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP---WPV--------PDKP 779
L QYRMH + FP+ FY+G L+ A R L+ + P P P+ P
Sbjct: 558 -LRRQYRMHETIMGFPNRTFYDGRLEADDTARHRTLAGLGVPEHALPADERRAILDPEAP 616
Query: 780 MLFYVTQGQE--EIAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
++F T G + E SG+ S N EA + ++TT + GM P I VI+PY+ Q
Sbjct: 617 LVFVDTSGIDAPEHQRSGSHSRENPREADLIAQLTTALLEAGMAPSAIAVISPYDDQVDR 676
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
+ + + G E +VD FQGREK+++++S VRSND IGFL++PRR NVA
Sbjct: 677 IDRALAPDGP---------ETDTVDGFQGREKEIVLLSLVRSNDRGAIGFLDEPRRFNVA 727
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+TRA+ +V+G+ ++ + + + +
Sbjct: 728 VTRAERKAVVVGDASTVAAADVLGAFVRYAE 758
>gi|452989270|gb|EME89025.1| hypothetical protein MYCFIDRAFT_55523 [Pseudocercospora fijiensis
CIRAD86]
Length = 1999
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 249/539 (46%), Gaps = 111/539 (20%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQT--------------- 547
+LN +Q AV A++ +LIQGPPG+GKT T IV L+ QT
Sbjct: 1280 NLNAAQSEAVNGALENEGFTLIQGPPGSGKTKTIVAIVGGLLSQTLANNPRGATRISVPA 1339
Query: 548 ----------GSPVLVCAPSNIAVDQL---------TEKIHRTGLKVVRVCAKSREAIDS 588
+LVCAPSN AVD+L T+ + VVR+ +AI++
Sbjct: 1340 ANSNFASDSASKKLLVCAPSNAAVDELVIRLKQGVKTKNGQNHAINVVRLGRS--DAINT 1397
Query: 589 PVSFLALHNQI----------------RNMEMNSELKKL-LQLKEETGELSSAD------ 625
V + + + RN E+ E +++ QL+E + +AD
Sbjct: 1398 QVRDVTMDELVAKKLGGGNEADEKQRQRNAELFKEHEQISAQLRELYAQRDAADAGEKMP 1457
Query: 626 EKRYRML-----------------------------------KKNAEKSLLDNADVICCT 650
EK + L +K A++++LD A VIC T
Sbjct: 1458 EKERKTLDDSIVHVRRRKAELGARIDNVKDSERNAGREQELNRKRAQQAVLDQAHVICAT 1517
Query: 651 CVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKK 708
G+G L I+F +++IDE+ Q E ++P+ G + I+VGD QL P V K+
Sbjct: 1518 LSGSGHDMFQSLNIEFETVVIDEAAQCVEMSSLIPLKYGCIKCIMVGDPKQLPPTVFSKE 1577
Query: 709 AARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
AA+ QSLF R+ L+ QYRMHP++S FPS FY+G L++G + +
Sbjct: 1578 AAKFQYEQSLFVRMQNNFPDEVHLLDTQYRMHPDISLFPSRSFYDGLLKDGPSMAKLRAQ 1637
Query: 768 KIDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK----P 821
PW P F+ GQ E A G S VNR E + E + R +R
Sbjct: 1638 ----PWHKSALLAPYRFFDVAGQHESAPKGHSLVNRAEIAIAELLYDR-LRADFPDYDFT 1692
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+IG+ITPY+ Q L ++ +I+ IE + DAFQGRE ++II SCVR++
Sbjct: 1693 SKIGIITPYKSQLRELKN--RFASKYGQQIFDFIEFNTTDAFQGRESEIIIFSCVRASPA 1750
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNL 940
GIGFL D RR+NV LTRAK + V+GN + L + W L+ +E+ L G + +
Sbjct: 1751 GGIGFLQDIRRMNVGLTRAKSSLWVLGNSESLMRGQYWKRLVEDARERDCLTSGDVKRM 1809
>gi|118368904|ref|XP_001017658.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila]
gi|89299425|gb|EAR97413.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila
SB210]
Length = 676
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/458 (32%), Positives = 247/458 (53%), Gaps = 54/458 (11%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
DLN Q A+ + + + LI GPPGTGKT+T ++YQ VK G VL CA SNIAVD
Sbjct: 235 DLNEEQKDAINFCLSSQTIGLIHGPPGTGKTMTVCELIYQAVK-MGLRVLACAGSNIAVD 293
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNME--MNSELKKLLQ 613
+ E++ +T LKV+R+ +R + +D+ + +++ ++ +N +L+KL +
Sbjct: 294 NMVERLAKTDLKVMRIGHPARMLPTIYEQCLDNKLRKTTCFKELKALKQNINKQLQKLQK 353
Query: 614 -----LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD----PRLLKIKF 664
K+E +L + K R ++ + K ++ + V+CCT GA D K++F
Sbjct: 354 DISYGEKKEIKKLLTELRKEMREQEQLSIKEVIQDTQVVCCTNSGAADYIFKRDFGKVEF 413
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
++IDE QA E C +P++LG K+++L GDH QL P + K+ GLS +LF+R+
Sbjct: 414 DLVVIDECAQALELSCWIPILLG-KRVVLAGDHKQLPPTI---KSKNQGLSVTLFDRV-- 467
Query: 725 LGIRPFR-------LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
++ F+ L+VQYRM+ ++ ++ S + Y G L+ + +
Sbjct: 468 --LKEFQPENVSRLLKVQYRMNQQIMEWSSQYVYGGQLKAHESVATHSIG--------GE 517
Query: 778 KPMLFYVTQG-------QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
+LF T G E S N EA V+ I G++ +++GVITPY
Sbjct: 518 SILLFIDTAGAKMGETINENANDKNKSKSNLGEADLVKIIFEELKLQGLQEKEVGVITPY 577
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L++ + ++ Q++EV++VD FQGREK+ II+S VRSN +GFL+D
Sbjct: 578 NAQ-VDLIKKLFENNNINT---QQVEVSTVDGFQGREKECIIISMVRSNPLNQVGFLSDY 633
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
RR+NVA+TRA+ + +IG+ + +S + ++ +++E
Sbjct: 634 RRMNVAVTRARKFVCLIGDSETVSSDKFLDEMVKYFQE 671
>gi|399218391|emb|CCF75278.1| unnamed protein product [Babesia microti strain RI]
Length = 1229
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 167/525 (31%), Positives = 255/525 (48%), Gaps = 64/525 (12%)
Query: 456 RMQLALRKFAVDDQ-SVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR------- 507
RM ALR F + + + +YHR + ++ + P F A N +NR
Sbjct: 718 RMVEALRSFTFNRSLNFKSPLYHRYSSF-LQNLIINSYTP--FGAYNSVIINRNSGAHDN 774
Query: 508 ---------SQVYAVKHAIQRPLSLIQ-GPPGTGKTVTSATIVYQLVK-QTGSPVLVCAP 556
+Q A K AI+ L+LIQ GPPGTGKT + +I++ K + +L A
Sbjct: 775 LVKTMNLTPAQSLACKSAIENELTLIQVGPPGTGKTHLACSIIHCWSKIYSYDKILAVAD 834
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
SNIA D L + + + +R+ S + I+ M+ +E L
Sbjct: 835 SNIAADNLLQGLTDRDISAIRIGQGSEPELQ--------ERAIQGMKRYNEYTTL----R 882
Query: 617 ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
++G A + +M+ + ++ A ++ TCVG G+ + F ++IDE Q+
Sbjct: 883 DSGRYKEAMTLKTQMISEAVKR-----ARIVIATCVGCGNEIVSSEVFTKVIIDECAQSI 937
Query: 677 -----EPEC--MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
+ EC ++P+ QL+L+GDH QL P ++ + A GLS SL ERL +
Sbjct: 938 GKLTLDIECSNIIPLTHSCNQLVLIGDHKQLRPTILSQDALFKGLSISLLERLAIFAPSC 997
Query: 730 FRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQG 787
L VQ RMHP +S+FP+ FYE L +G K F WP + + F V+ G
Sbjct: 998 VHLLNVQRRMHPSISQFPNQHFYEHRLTDGENVFAYTPLK-GFKWPCENFNVCFVDVSIG 1056
Query: 788 QEEIAGS------GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQH 840
AGS G S N E + V + + FI G + QIG++TPY+ Q+ L
Sbjct: 1057 ---CAGSNYERPQGQSKYNIIETNVVVALLSSFISAGEITSRQIGILTPYDSQKYHL--K 1111
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
+ + P+ + +E+ SVD FQG+EKDLII S VRSN +GFL D RR+NV LTRA
Sbjct: 1112 TKINSTFPSDVCNGLEIDSVDGFQGKEKDLIIFSAVRSNSDGTVGFLKDSRRMNVMLTRA 1171
Query: 901 KYGIIVIGNPKVLSKQPL-WNNLLNFYKEQKVLVEGPLNNLKESL 944
+ GI+V+G+ L + W L F ++ ++ +++LKE L
Sbjct: 1172 RRGIVVVGDRFTLMNETTNWKAWLQFLSDRNSIIR--ISDLKEHL 1214
>gi|331213013|ref|XP_003307776.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298179|gb|EFP74770.1| hypothetical protein PGTG_00726 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 2157
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 243/518 (46%), Gaps = 108/518 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVK---QTGSP---------- 550
+N Q A+ A+ P SLIQGPPGTGKT T ++ + + G P
Sbjct: 1430 VNEPQGRAIISALATPGFSLIQGPPGTGKTSTIVGLIGAFIASRPKVGDPAGGGKQPSIT 1489
Query: 551 --VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREA-------IDSPVS 591
+L+CAPSN AVD++ +++ + G+ K+VR+ A S+ ID V+
Sbjct: 1490 RKILLCAPSNAAVDEVAKRL-KEGVRGAQGELIIPKLVRIGADSKVNLAVKDIFIDELVA 1548
Query: 592 FLA--------------LHNQIRNMEMN-SELKKLLQLKEETGELSSADEKRYRMLK--- 633
++ I+++ SEL+ K+ E + +YR L+
Sbjct: 1549 AMSKDAEPGKAAETVAGAAGAIQDLRQQLSELRDTRDSKQMEAERLPTESPQYRTLQEEV 1608
Query: 634 --------------------KNAEKSLLD------------NADVICCTCVGAGDPRL-- 659
++A K LD +ADV+C T G+G +
Sbjct: 1609 TRIRRKIHELSAKIDQARDQQDASKRYLDAATRKLRMQILQDADVVCSTLSGSGHDYMSQ 1668
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
L F +++IDE+ Q EP ++P+ A Q ILVGD QL P V+ + A++AG QSLF
Sbjct: 1669 LPFDFETVVIDEACQCVEPASLIPLRYNATQCILVGDPMQLPPTVLSQTASQAGYDQSLF 1728
Query: 720 ERLVVLGIR-PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
R+ L +QYRMHP +S FPS FY+ L +G + + + PW
Sbjct: 1729 VRMQRNAPDVAHLLSIQYRMHPSISTFPSKAFYDSKLLDGPEMESKAVQ----PWHQSGS 1784
Query: 779 ---PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-----QIGVITPY 830
P FY G E G+ S +NRTEAS I R P ++G+IT Y
Sbjct: 1785 LFPPYAFYHPVGAREERGAHHSLMNRTEASLAVSIYWRI--ANDYPHIDFAYRVGIITGY 1842
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-----SNDHQGIG 885
Q + + Q + PA I+V +VD FQG+EKD+II+SCVR +N GIG
Sbjct: 1843 AAQVGEIRR--QLRAKFPASTVAAIDVNTVDGFQGQEKDIIILSCVRGGRDDNNSGGGIG 1900
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
FL D RR+NVALTRAK + +IGN VLS+ P W L+
Sbjct: 1901 FLKDIRRMNVALTRAKSSMFIIGNRAVLSQDPTWKALV 1938
>gi|323336740|gb|EGA78004.1| Hcs1p [Saccharomyces cerevisiae Vin13]
Length = 683
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 175/566 (30%), Positives = 283/566 (50%), Gaps = 89/566 (15%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKST---SFDRMQLALRKFAVDD 468
G V K+ D ++ + L+ S +S +I K+T +++RM+ +RK +
Sbjct: 117 GVVYKMSDT---QITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLS--- 170
Query: 469 QSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSL 523
+S+ I +++ + V+E R +P S N+ P+LN SQ A+ AI L++
Sbjct: 171 -EISSPIQDKIIQYLVNE---RPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAINNDLTI 226
Query: 524 IQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLTEKIH---------RTGL 573
I GPPGTGKT T ++ QL +K +L+C PSNI+VD + E++ R G
Sbjct: 227 IHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGH 286
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR----- 628
+ + R ++D L+ N I +++ E+ KL+Q E +L + +++
Sbjct: 287 PARLLDSNKRHSLD----ILSKKNTIVK-DISQEIDKLIQ---ENKKLKNYKQRKENWNE 338
Query: 629 YRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK--------FHSILIDESM 673
++L+K+ +K L+ + ++ T G+ L + F +++IDE
Sbjct: 339 IKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELXSLYRDDPNFQLFDTLIIDEVS 398
Query: 674 QATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCK--KAARAGLSQSLFERLVVLGIR 728
QA EP+C +P+I Q L+L GD+ QL P + + K L +LF+R++ I
Sbjct: 399 QAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIF 456
Query: 729 PFR-----LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDK- 778
P R L VQYRM+ ++ +FPS+ Y G L R L ID P P D
Sbjct: 457 PKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDD 514
Query: 779 ----PMLFYVTQGQE--EIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
P+++Y TQG E E A T S N E + V++ + IGVI+P
Sbjct: 515 DTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISP 574
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q + L + + + L +IE+++VD FQGREKD+II+S VRSN+ +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSK 915
RRLNVA TR + ++V+GN +VL +
Sbjct: 630 ERRLNVAXTRPRRQLVVVGNIEVLQR 655
>gi|374106511|gb|AEY95420.1| FACL098Cp [Ashbya gossypii FDAG1]
Length = 657
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 264/551 (47%), Gaps = 76/551 (13%)
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVS 472
V+ D G+ L+L+S++ T + ++ RM+ LRK A +S
Sbjct: 107 QVVVALDEGGEAAALQLQSASSVVMVKTV--------NTVTYKRMESTLRKLAEHGDEIS 158
Query: 473 AYIYHRLLGHNVDEVLFRCHLPKHFSAPNL------PDLNRSQVYAVKHAIQRPLSLIQG 526
I LL C P H P PDLN SQ AV A++ +S+I G
Sbjct: 159 NPIAQYLL----------CQRPFHAQPPEQGVEFHNPDLNASQRDAVAFALRNEISIIHG 208
Query: 527 PPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT--GLKVVRVCAKSR- 583
PPGTGKT T ++ QL + G VLVC PSNIAVD + E++ R G +++RV +R
Sbjct: 209 PPGTGKTHTLVELIRQLYDR-GHRVLVCGPSNIAVDTVLERLSRPIPGAELLRVGHPARL 267
Query: 584 --EAIDSPVSFLALHNQ----IRNM--EMNSELKKLLQLKEETGELSSADE-----KRYR 630
+ + LA +R++ E+N + + ++K + E K +
Sbjct: 268 LPGNLAHSLDILAKEGDGGSIVRDIGREINQRIADVRKIKSSRDRKKAWQEVRDLRKELK 327
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------FHSILIDESMQATEPECMVPV 684
++N L+ A V+ CT G+ L + F +++IDE Q+ EP+C +P+
Sbjct: 328 QRERNVVSELILAARVVVCTLHGSSAYSLCHMYDKCARLFDTVIIDEVSQSLEPQCWIPL 387
Query: 685 IL----GAKQLILVGDHCQLGPVVMCKKAA--RAGLSQSLFERLVVLGIRPFR--LEVQY 736
I +L++ GD+ QL P V + A R LS ++F++L F+ L+VQY
Sbjct: 388 ISHYQSNISKLVIAGDNKQLPPTVKTEDDAHVRQVLSTTIFDKLERHYGDQFKKLLDVQY 447
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDKPMLFYVTQGQ---- 788
RM+ + F S Y G L+ + L+ D P P+++Y TQG
Sbjct: 448 RMNERIMAFASESLYAGKLKAWQGVASQTLA--DLPGVDESDDTSAPLVWYDTQGDDFPE 505
Query: 789 -EEIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
EE AG S N EA V ++ C + E IGVI+PY Q A L + + Q
Sbjct: 506 AEEAAGGPALMASKFNENEAYLVLHHISQLRACNVPQEAIGVISPYNAQVALLKKTIHGQ 565
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
L +E++SVD FQGREK+ I++S VRSND +GFL D RRLNVA+TRA+ +
Sbjct: 566 HPL-------VEISSVDGFQGREKECIVLSLVRSNDSFDVGFLRDERRLNVAMTRARRQL 618
Query: 905 IVIGNPKVLSK 915
VIGN + L +
Sbjct: 619 CVIGNMETLER 629
>gi|350633858|gb|EHA22222.1| DNA helicase [Aspergillus niger ATCC 1015]
Length = 721
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 165/521 (31%), Positives = 250/521 (47%), Gaps = 77/521 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL----PDLNRS 508
++ RM + K +S + GH LP + S L P LN S
Sbjct: 193 TYRRMNQTMEKMVKMAESEHTHFMRVAFGHT------SPMLPDYDSIGALEFTDPTLNDS 246
Query: 509 QVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
Q A++ A+ R ++LI GPPGTGKT T ++ Q+V Q VLVC PSNI+VD + E+
Sbjct: 247 QKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMV-QRKQRVLVCGPSNISVDNIVER 305
Query: 568 IHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSA 624
+ + VVR+ +R +D + L H + K++ Q + + +A
Sbjct: 306 LAPKKVPVVRIGHPARLLPSVLDHSLEVLT-HTSEAAAIVRDVRKEIDQKQASIRKTRAA 364
Query: 625 DEKR------------YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
E+R +R + ++L+ + V+ T GAG +L KF ++IDE+
Sbjct: 365 RERRAIYDDLRELRREFRERENKCVENLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEA 424
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA-------------------RAG 713
QA E +C +P +L A +++L GDH QL P V K
Sbjct: 425 SQALEAQCWIP-LLSASKVVLAGDHLQLPPTVKSTKENAKKAAKEKEDKKENGELLENVS 483
Query: 714 LSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
L +LF+RL+ + GI+ L QYRMH ++ +FPS+ Y+ L +R L D
Sbjct: 484 LETTLFDRLLSMHGPGIKRM-LTTQYRMHEKIMQFPSDELYDSKLMAADSVKDRLLK--D 540
Query: 771 FPWPVPD-----KPMLFYVTQGQE-----------EIAGSGTSYVNRTEASNVEKITTRF 814
P+ V + +P++F+ TQG + + A G S N EA V +
Sbjct: 541 LPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGESKSNDMEALVVSRHVDAL 600
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
+ G+ PE I VITPY GQ A L Q ++ + Y IE+ SVD FQGREK+ +++S
Sbjct: 601 VDAGIHPEDIAVITPYNGQLAVLSQMLREK-------YPSIELGSVDGFQGREKEAVVVS 653
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
VRSN +GFL + RRLNVA+TR K + + G+ + +SK
Sbjct: 654 LVRSNSEHEVGFLGERRRLNVAMTRPKRHLCICGDSETISK 694
>gi|311746247|ref|ZP_07720032.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
gi|126576477|gb|EAZ80755.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
Length = 642
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 161/530 (30%), Positives = 268/530 (50%), Gaps = 71/530 (13%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP-- 500
VD ++ S+ M+ AL+K ++ + H LLG P+ P
Sbjct: 128 LGVDLLFDEASYREMEFALKKMMSEENKRVEELKHVLLGEKA---------PQFNDTPYK 178
Query: 501 NLPDLNRSQVYAVKH-AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
+ P+LN SQ A + + + ++++ GPPGTGKT T + Q V G +LV APSN
Sbjct: 179 SNPNLNFSQNQACQLISNAKDVAVVHGPPGTGKTTTLIEAIEQAVT-AGQSILVSAPSNA 237
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNM--EMNSELKK 610
AVD L EK+ G++ +R+ +R + +D+ +F + + ++ + E + LK
Sbjct: 238 AVDLLVEKLIDQGIETLRLGHPARVEEKILNQTLDAKTAFHSSYRDLKKLRKETDQYLKL 297
Query: 611 LLQLKEETG-------ELSSADEKRYRMLKKNAEK----SLLDNADVICCTCVGAGDPRL 659
Q K + G +L A+ R R K+ E+ + V T VGA L
Sbjct: 298 AKQYKRKFGPEERAQRKLMYAEVSRLREASKSLEEYIQYDIFQKTKVFASTLVGASSYSL 357
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
++F + IDE+ Q E +P IL AK+++ GDHCQL P + +AA+ GL+++LF
Sbjct: 358 KGMEFDVVFIDEAAQGLEAATWIP-ILKAKKVVFAGDHCQLPPTIKSYQAAQEGLAETLF 416
Query: 720 ERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
E+++ + + L+VQYRM + F + FY+G LQ A+ KL +P D+
Sbjct: 417 EKVIARKSQASQMLQVQYRMPEVIMGFSNEQFYKGELQ---AAENTKLH----TFPGEDQ 469
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEK------------ITTRFIRCGM---KPE- 822
+ E I +G Y ++ EA ++ + +R G+ K E
Sbjct: 470 QL--------EWIDTAGAGYNDQKEAESLSTCNPEEAAFACRYLNEMIVRIGIGNFKQEG 521
Query: 823 -QIGVITPYEGQRAFLVQHMQYQG-SLP-AKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
IG+I PY G + L++ + ++G P K + + I + +VD FQG+E+DL+++S RS
Sbjct: 522 WTIGLIAPY-GAQVRLLRSLIFEGFEYPNLKAFSDLITIDTVDGFQGQERDLMLISLTRS 580
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
N+ IGFL D RR+NVALTRAK ++++G+ L+ P ++ LL ++++
Sbjct: 581 NEKGEIGFLADERRMNVALTRAKRKLVLVGDSSTLALNPFFDQLLQYFEK 630
>gi|268637806|ref|XP_002649136.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
gi|256012898|gb|EEU04084.1| hypothetical protein DDB_G0285243 [Dictyostelium discoideum AX4]
Length = 2069
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 159/501 (31%), Positives = 239/501 (47%), Gaps = 92/501 (18%)
Query: 505 LNRSQVYAVKHAIQR--PLSLIQGPPGTGKTVT-------SATIVYQLVKQTGSP-VLVC 554
LN SQ+ A+ ++ SL+QGPPGTGKT T T++ + K P +LVC
Sbjct: 1372 LNESQLSAIASTLKNLGGFSLLQGPPGTGKTKTILSLLSVFTTVLTNIEKSHSDPKILVC 1431
Query: 555 APSNIAVDQLTEKIHRTGL--------KVVRVCAKSREAIDSPVSFLALHNQI------- 599
APSN AVD++ +I + GL K V ++ I V +++ + I
Sbjct: 1432 APSNAAVDEIALRIKKDGLIDKNGNKFKPVICRIGNQSHIHPSVQDISVESLILGEYKDK 1491
Query: 600 -----------------------RNMEMNSELKKLLQ---------LKEETGELSSADEK 627
+ +E++ ++K L + L+ E +L+ EK
Sbjct: 1492 NSAIANEDQKKENTRLKIIKIKEKQVEIDKQIKDLAERLKQQEDNKLRNEITKLNYTREK 1551
Query: 628 -----------------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI--KFHSIL 668
+Y K+N +++ + +I T G+G L F ++
Sbjct: 1552 YNNDLKLAKDEERRFHEQYSNTKRNLYINIIGRSQIILSTLSGSGYDYLFTATKNFDLVI 1611
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR 728
+DE+ QA E ++P+ K+ ILVGD QL P + K A + SLF+RL+ G+
Sbjct: 1612 VDEAAQAVELSTLIPLRHDVKKCILVGDPQQLPPTTISKVATKFQYEISLFQRLMNCGMA 1671
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLFY-VT 785
P L+ QYRMHP +SKFPS FY G L++G E K D+ + P++FY +
Sbjct: 1672 PTVLKTQYRMHPMISKFPSKIFYRGELEDGKNVREYKQ---DYYNDSASRFGPLVFYDLF 1728
Query: 786 QGQEEIAGSGTSYVNRTEASNVEKITTRFIRC--GMKPEQIGVITPYEGQRAFLVQHMQY 843
E+ S S N TE + I + I K +IGVITPY+ Q L
Sbjct: 1729 DKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYPNTKDLEIGVITPYKSQSVDLFNAF-- 1786
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
K YQ +EV+++D FQG+EKD +I S VR++ IGFL+D RR+NV LTRAKY
Sbjct: 1787 ------KGYQNVEVSTIDGFQGKEKDFVIFSSVRAHSGHSIGFLSDIRRMNVGLTRAKYS 1840
Query: 904 IIVIGNPKVLSKQPLWNNLLN 924
++++GN +LS W NL+N
Sbjct: 1841 MVILGNSSLLSNNDDWGNLVN 1861
>gi|423285449|ref|ZP_17264331.1| hypothetical protein HMPREF1204_03869 [Bacteroides fragilis HMW
615]
gi|404578964|gb|EKA83682.1| hypothetical protein HMPREF1204_03869 [Bacteroides fragilis HMW
615]
Length = 634
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 232/451 (51%), Gaps = 36/451 (7%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLALHNQIRNMEMNS 606
VD + EK+ G+ V+R+ SR E S + IR EM +
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPSYTELWGIRKSIR--EMGN 305
Query: 607 ELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF 664
++K E S + R R L+ + L A VI T V + L +F
Sbjct: 306 RMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRF 364
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 365 TTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAA 423
Query: 725 LGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY 783
L +VQYRMH + +F S +FY+G LQ R + +D P D + +
Sbjct: 424 NKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEMEF 483
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAFL 837
EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +L
Sbjct: 484 ----HEEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQYL 539
Query: 838 VQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
+ +G L + ++ +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NVA
Sbjct: 540 --RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVA 597
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+TRA+ ++++G+ +SK + L+ + +
Sbjct: 598 ITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|365764642|gb|EHN06164.1| Hcs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 683
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 279/554 (50%), Gaps = 86/554 (15%)
Query: 424 EVGLELKSSAGAPTEATTGFSVDFIWKST---SFDRMQLALRKFAVDDQSVSAYIYHRLL 480
++ + L+ S +S +I K+T +++RM+ +RK + +S+ I +++
Sbjct: 126 QITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLS----EISSPIQDKII 181
Query: 481 GHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVT 535
+ V+E R +P S N+ P+LN SQ A+ AI L++I GPPGTGKT T
Sbjct: 182 QYLVNE---RPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAINNDLTIIHGPPGTGKTFT 238
Query: 536 SATIVYQL-VKQTGSPVLVCAPSNIAVDQLTEKIH---------RTGLKVVRVCAKSREA 585
++ QL +K +L+C PSNI+VD + E++ R G + + R +
Sbjct: 239 LIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGHPARLLDSNKRHS 298
Query: 586 IDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR-----YRMLKKNAEK-- 638
+D L+ N I +++ E+ KL+Q E +L + +++ ++L+K+ +K
Sbjct: 299 LD----ILSKKNTIVK-DISQEIDKLIQ---ENKKLKNYKQRKENWNEIKLLRKDLKKRE 350
Query: 639 -----SLLDNADVICCTCVGAGDPRLLKIK--------FHSILIDESMQATEPECMVPVI 685
L+ + ++ T G+ L + F +++IDE QA EP+C +P+I
Sbjct: 351 FKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIPLI 410
Query: 686 LGAKQ---LILVGDHCQLGPVVMCK--KAARAGLSQSLFERLVVLGIRPFR-----LEVQ 735
Q L+L GD+ QL P + + K L +LF+R++ I P R L VQ
Sbjct: 411 AHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIFPKRDMVKFLNVQ 468
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDK-----PMLFYVTQ 786
YRM+ ++ +FPS+ Y G L R L ID P P D P+++Y TQ
Sbjct: 469 YRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDDDTKIPLIWYDTQ 526
Query: 787 GQE--EIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
G E E A T S N E + V++ + IGVI+PY Q + L + +
Sbjct: 527 GDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLI 586
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
+ L +IE+++VD FQGREKD+II+S VRSN+ +GFL + RRLNVA+TR +
Sbjct: 587 HDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAITRPR 641
Query: 902 YGIIVIGNPKVLSK 915
++V+GN +VL +
Sbjct: 642 RQLVVVGNIEVLQR 655
>gi|410099466|ref|ZP_11294437.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
gi|409218937|gb|EKN11903.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
Length = 647
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 238/457 (52%), Gaps = 52/457 (11%)
Query: 502 LPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV H + + +S++ GPPGTGKT T +Y+ + + V+VCA SN A
Sbjct: 187 FPWLNTTQEEAVNHVLSAKEVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCAQSNTA 245
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VD ++EK+ G+ V+R+ +R D +SF R E + + +L +++ E
Sbjct: 246 VDWISEKLVDRGINVLRIGNPTR-VNDKMLSF----TYERRFESHPDYSELWGIRKAIRE 300
Query: 621 LSSA---------DEKRYRM---------LKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
+ S+ D R R+ L+ + L A VI CT VG+ + L
Sbjct: 301 IQSSFRKKSHSEKDTARNRLSRLRFRATELEVQIDADLFSEARVIACTLVGSANRVLTNH 360
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
F ++ IDE+ QA E C + I A ++IL GDH QL P + C +A R GL ++L ++
Sbjct: 361 NFTTLFIDEAAQALEAACWI-AISKADRVILAGDHHQLPPTIKCIEATRGGLDRTLMQK- 418
Query: 723 VVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
V +P L+VQYRMH ++ +F S +FY+ LQ A E K I D P
Sbjct: 419 -VAAGKPETVSLLKVQYRMHEDIMRFSSRWFYQDELQ---AAPEVKYRGI----LAYDTP 470
Query: 780 MLFYVTQG---QEEIAGSGTSYVNRTEA--------SNVEKITTRFIRCGMKPEQIGVIT 828
++++ T +E+ S +N+ EA + +EKI+ R + G+I+
Sbjct: 471 VVWFDTADCDFEEDQLSESQSRINKKEAELLVEQLQAYIEKISKE--RVLDESIDFGLIS 528
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY+ Q + ++ + + S + I V +VD FQG+E+D+I++S VR+ND IGFLN
Sbjct: 529 PYKSQVQY-IRGLIKRNSFFKPFRKLITVHTVDGFQGQERDVIMISLVRANDQGNIGFLN 587
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
D RR+NVA+TRA+ +I++G+ L+K + L +
Sbjct: 588 DLRRMNVAITRARMKLIILGDASTLTKHTFYRELYKY 624
>gi|315045920|ref|XP_003172335.1| DNA-binding protein SMUBP-2 [Arthroderma gypseum CBS 118893]
gi|311342721|gb|EFR01924.1| DNA-binding protein SMUBP-2 [Arthroderma gypseum CBS 118893]
Length = 717
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 166/538 (30%), Positives = 256/538 (47%), Gaps = 76/538 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL-FRCHLPKHFSAPNLPDLNRSQVY 511
++ RM + + K +S + + L GH L F F +L N SQ
Sbjct: 180 TYRRMNMTMMKLEKMQESEYSQLIRVLFGHTTPSPLDFESVGQLEFMDGSL---NGSQKE 236
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ QLV Q VLVC PSNI+VD + E++
Sbjct: 237 AIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISVDNIVERLAS 295
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
+ +VR+ +R +D + L+ ++ ++++ +LK+ K G
Sbjct: 296 QKVSLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDLKQASIRKTRNGRERR 355
Query: 624 ADEKRYRMLKKN---AEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A R L+K E +DN + V+ T GAG +L KF ++IDE+ QA
Sbjct: 356 AIYGDLRELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVIIDEASQAR 415
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG----------------------- 713
E +C +P +L A ++IL GDH QL P + + +++ G
Sbjct: 416 EAQCWIP-LLSASKVILAGDHLQLPPTIKSRSSSKPGQNNSALWDKEDLDLTELSNKFDM 474
Query: 714 --LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
L +LF+RL+ L + L QYRMH ++ FPS YE L ER L
Sbjct: 475 RNLEITLFDRLLSLHGTAIKRMLTTQYRMHQKIMDFPSGELYESKLIAADAVRERLLK-- 532
Query: 770 DFPWPVPD-----KPMLFYVTQGQEEIAGSGTSY------------VNRTEASNVEKITT 812
D P+ + D +P++FY TQG + + S S N EA V +
Sbjct: 533 DLPYEIEDIDDTIEPLVFYDTQGGDFLEKSPDSTSISAKSLLVESKCNDMEAEVVARHVE 592
Query: 813 RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
+ G++PE I VITPY Q A L Q ++ + + +E+ SVD FQGREK+ ++
Sbjct: 593 NLVSAGVRPEDIAVITPYNAQVALLSQLLKQK-------FPTLELGSVDGFQGREKEAVV 645
Query: 873 MSCVRSNDHQGIGFLNDPRRLN-VALTRAKYGIIVIGNPKVL-SKQPLWNNLLNFYKE 928
+S VRSN +GFL + RRLN VA+TR + + + G+ + + S P + F +E
Sbjct: 646 VSLVRSNSDHEVGFLGEKRRLNAVAMTRPRRHLCICGDSETVGSGSPFLKRWMAFLEE 703
>gi|295084850|emb|CBK66373.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
Length = 649
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 261/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 143 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 200
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 201 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 255
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 256 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 314
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 315 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 364
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 365 IASTLVSSNHRLLNGRRFSTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 423
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+ GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 424 IEASCGGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRG 483
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCG---MKP 821
+ D P D + + E+ G +N+ EA+ + +++ T R G +
Sbjct: 484 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKERILD 539
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 540 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 597
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 598 NEDGQIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKE 648
>gi|423260347|ref|ZP_17241269.1| hypothetical protein HMPREF1055_03546 [Bacteroides fragilis
CL07T00C01]
gi|423266481|ref|ZP_17245483.1| hypothetical protein HMPREF1056_03170 [Bacteroides fragilis
CL07T12C05]
gi|387775493|gb|EIK37600.1| hypothetical protein HMPREF1055_03546 [Bacteroides fragilis
CL07T00C01]
gi|392701058|gb|EIY94219.1| hypothetical protein HMPREF1056_03170 [Bacteroides fragilis
CL07T12C05]
Length = 634
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 234/452 (51%), Gaps = 38/452 (8%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGWR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L + +G L + ++ +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NV
Sbjct: 539 L--RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNV 596
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
A+TRA+ ++++G+ +SK + L+ + +
Sbjct: 597 AITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|183229840|ref|XP_657569.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169803118|gb|EAL52192.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 966
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 172/296 (58%), Gaps = 12/296 (4%)
Query: 640 LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
+L + +C T LLK KF + ++DE+ Q+ EPE + +I ++ +L+GD Q
Sbjct: 623 ILSGTECVCSTLTICTRSTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKTVLIGDIQQ 681
Query: 700 LGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
L P + +A AG +S+FER + I+ L+ QYRMHP +S+F + FY L+NG
Sbjct: 682 LQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENG 741
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V D+R ++I +P P++F G E SGTSY N E ++++ + +
Sbjct: 742 VSIDDRFDNRIINFFPDYTNPIMFINCDGTEHYGSSGTSYNNAGEVQIIQEVVEKLLNND 801
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
++ +IG+I+PY+ Q+ + Q++ +I+VA++D FQG EK+ II SCVRS
Sbjct: 802 IEENEIGIISPYQAQQELISQYVS----------TKIKVANIDGFQGNEKEYIIFSCVRS 851
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
N G+GF+ND +RLNVALTRAK G+I+IGN L +WN L++ + +K L E
Sbjct: 852 NQTLGVGFVNDYKRLNVALTRAKRGLIIIGNIPTLVTSKVWNMLIHHFYLKKALFE 907
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 440 TTGFSVDFIW--KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL-FRCHLPKH 496
T+ F + F+ K F R L+ +D+ H+ E++ + +
Sbjct: 297 TSLFRIYFLTNDKGNPFTRTLDVLQSREIDEYYSKILCCHKKQSTKTKEIITYEEMSAEK 356
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL---------VKQT 547
++ PNL +LN Q A+ +A+ +SL+ GPPGTGKT + +I L + +
Sbjct: 357 YNIPNLSNLNDYQRKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKYRFYNINRG 416
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
+LVCA SN AVD + K+ G+ VRV A + F ++IR NS
Sbjct: 417 EKKLLVCASSNNAVDVICSKLIEKGVPTVRVVADEQ--------FENCSDKIRE---NSL 465
Query: 608 LKKLLQLKEETG 619
LKK ++ E+ G
Sbjct: 466 LKKAIEFTEKKG 477
>gi|423331731|ref|ZP_17309515.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
gi|409229572|gb|EKN22444.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
Length = 640
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/457 (31%), Positives = 240/457 (52%), Gaps = 36/457 (7%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LNRSQ AV + + +S++ GPPGTGKT T +Y+ + + V+VCA SN A
Sbjct: 185 FPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VIVCAQSNTA 243
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD ++EK+ G+ V+R+ +R D +SF ++ IR+++ N
Sbjct: 244 VDCISEKLVDRGINVLRIGNPTR-INDKMLSFTYERRFESHPDYPELWSIRKAIRDIQSN 302
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
KK + ++ S + R L+ + L D A V+ CT VG+ + ++ F
Sbjct: 303 MR-KKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFT 361
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
++ IDE+ QA E C + I A ++IL GDH QL P + C +A R GL ++L +++
Sbjct: 362 TLFIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT 420
Query: 726 GIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
L ++QYRMH ++ +F S +FY L++ R + ++D P D +
Sbjct: 421 KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT 480
Query: 785 TQGQEEIAGSGTSYVNRTEA--------SNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+EE S VNR EA S ++KI+ R + G+I+PY+ Q +
Sbjct: 481 ENTREETM----SRVNRQEAELLVEQLRSYIQKISKE--RVLEENIDFGLISPYKAQVQY 534
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
++ + Q + + + I V +VD FQG+E+D+I++S VR+N+ IGFLND RR+NVA
Sbjct: 535 -IRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVA 593
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
+TRA+ ++++G+ L++ + L N+ ++ ++
Sbjct: 594 ITRARMKLMILGDASTLTRHAFYKELYNYISQRGKII 630
>gi|160885310|ref|ZP_02066313.1| hypothetical protein BACOVA_03309 [Bacteroides ovatus ATCC 8483]
gi|156109660|gb|EDO11405.1| putative DNA helicase [Bacteroides ovatus ATCC 8483]
Length = 649
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 261/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 143 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 200
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 201 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 255
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 256 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 314
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 315 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 364
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 365 IASTLVSSNHRLLNGRRFSTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 423
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+ GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 424 IEASCGGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRG 483
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCG---MKP 821
+ D P D + + E+ G +N+ EA+ + +++ T R G +
Sbjct: 484 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELKTYIERIGKERILD 539
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 540 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 597
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 598 NEDGQIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKE 648
>gi|315231815|ref|YP_004072251.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
gi|315184843|gb|ADT85028.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
Length = 652
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 166/497 (33%), Positives = 246/497 (49%), Gaps = 86/497 (17%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV A+ LI GP GTGKT T A ++ Q VK+ G VL A SN+AVD
Sbjct: 171 LNESQRKAVSFALGGEDFFLIHGPFGTGKTRTLAEVILQEVKR-GKKVLATAESNVAVDN 229
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLAL----HNQIRNM-EMNSELKKLLQLKEET 618
L E++ +K+VR+ SR + S LA H + R + E+ S+ ++L L+++
Sbjct: 230 LVERLW-GKVKLVRLGHPSRVSKHLKESTLAYQVETHEKFRRVKELRSKAERLAMLRDQC 288
Query: 619 GE----------------------------------------LSSADEKRYRMLKKNAE- 637
+ + +K Y KK E
Sbjct: 289 TKPTPQWRRGLTDRQILRLAERGIGARGIPARVVKSMAQWIAFNEKVQKLYDEAKKLEEE 348
Query: 638 --KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
+ ++ ADV+ T A + I F ++DE+ QAT P ++P I AK+ IL G
Sbjct: 349 IIREVISKADVVLSTNSSAALDFIKDINFDVAVVDEASQATIPSVLIP-IAKAKKFILAG 407
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
DH QL P ++ ++A LS++LFE+L+ L + LE+QYRM+ L +FPS FY G
Sbjct: 408 DHKQLPPTILSEEAKE--LSETLFEKLIKLYPSKAKMLEIQYRMNERLMEFPSREFYNGR 465
Query: 755 LQ--NGVCADERKLSKIDF---------PWPV---PDKPMLFYVTQGQ----EEIAGSGT 796
++ +GV + ++ +D PW P +P++F T E
Sbjct: 466 IKAYDGV----KNITLLDLGIRVFHFGEPWDSILNPKEPLVFVDTSKHPEKWERQRKGSL 521
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
S N EA V++I R +R G++PE IGVITPY+ QR + ++ EIE
Sbjct: 522 SRENPLEAKLVKEIVKRLLRMGIRPESIGVITPYDDQRDLISSLIEND---------EIE 572
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
V +VD +QGREK++II+S VRSN +GFL D RRLNV+LTRAK +I IG+ + L
Sbjct: 573 VKTVDGYQGREKEVIILSFVRSNKKGELGFLTDLRRLNVSLTRAKRKLIAIGDSETLGAH 632
Query: 917 PLWNNLLNFYKEQKVLV 933
P + + F K++ +
Sbjct: 633 PTYKRFVEFVKKKGAFI 649
>gi|336416735|ref|ZP_08597067.1| hypothetical protein HMPREF1017_04175 [Bacteroides ovatus
3_8_47FAA]
gi|335937173|gb|EGM99077.1| hypothetical protein HMPREF1017_04175 [Bacteroides ovatus
3_8_47FAA]
Length = 645
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 261/531 (49%), Gaps = 59/531 (11%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 139 AGALAELQTDGILGVQLYFDETSYRAMFEALEDTIRAKDNRLAELRDILLG--TQKPGFR 196
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 197 ELYPVRF-----PWLNSTQETAVNKVLCTRDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 251
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLAL 595
VLVCA SN AVD + EK+ G+ V+R+ +R E+ + +
Sbjct: 252 -VLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWGI 310
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM---------LKKNAEKSLLDNADV 646
IR EM S +++ G S + R RM L+ L D+A V
Sbjct: 311 RKSIR--EMGSRMRR--------GSYSEREGMRNRMSRLRDRATELEIQINADLFDSARV 360
Query: 647 ICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
I T V + L +F ++ IDE+ QA E C + I A ++IL GDHCQL P + C
Sbjct: 361 IASTLVSSNHRLLNGRRFSTLFIDEAAQALEAACWI-AIRKADRVILAGDHCQLPPTIKC 419
Query: 707 KKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
+A+ GL +L E++V L +VQYRMH + +FPS++FY G L+ R
Sbjct: 420 IEASCGGLDHTLMEKVVQQKPSAVSLLKVQYRMHEAIMQFPSDWFYHGELEAAPEVRYRG 479
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCG---MKP 821
+ D P D + + E+ G +N+ EA+ + +++ T R G +
Sbjct: 480 ILDFDTPMNWIDTSEMDF----HEDFVGESFGRINKQEANLLLQELETYIERIGKERILD 535
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I G+I+PY+ Q +L + +GS + ++ I V +VD FQG+E+D+I +S VR+
Sbjct: 536 ERIDFGLISPYKAQVQYL--RGKIKGSSFLRPFRSLITVNTVDGFQGQERDVIFISLVRA 593
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
N+ IGFLND RR+NVA+TRA+ ++++G+ L+K P + L+ F K++
Sbjct: 594 NEDGQIGFLNDLRRMNVAITRARMKLVILGDASTLTKHPFYKRLMLFIKKE 644
>gi|301310190|ref|ZP_07216129.1| DNA helicase [Bacteroides sp. 20_3]
gi|300831764|gb|EFK62395.1| DNA helicase [Bacteroides sp. 20_3]
Length = 640
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 239/460 (51%), Gaps = 42/460 (9%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LNRSQ AV + + +S++ GPPGTGKT T +Y+ + + V+VCA SN A
Sbjct: 185 FPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VIVCAQSNTA 243
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VD ++EK+ G+ V+R+ +R D +SF R E + + +L +++ +
Sbjct: 244 VDCISEKLVDRGINVLRIGNPTR-INDKMLSF----TYERRFESHPDYPELWSIRKAVRD 298
Query: 621 LSSADEKRYRM------------------LKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
+ S K+ R L+ + L D A V+ CT VG+ + ++
Sbjct: 299 IQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRIMMNR 358
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
F ++ IDE+ QA E C + I A ++IL GDH QL P + C +A R GL ++L +++
Sbjct: 359 HFTTLFIDEAAQALEAACWI-AISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKI 417
Query: 723 VVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
L ++QYRMH ++ +F S +FY L++ R + ++D P D
Sbjct: 418 AHAKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSEC 477
Query: 782 FYVTQGQEEIAGSGTSYVNRTEA--------SNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
+ +EE S VNR EA S ++KI+ R + G+I+PY+ Q
Sbjct: 478 DFTENTREETM----SRVNRQEAELLVEQLRSYIQKISKE--RVLEENIDFGLISPYKAQ 531
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
+ ++ + Q + + + I V +VD FQG+E+D+I++S VR+N+ IGFLND RR+
Sbjct: 532 VQY-IRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRM 590
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
NVA+TRA+ ++++G+ L++ + L N+ ++ ++
Sbjct: 591 NVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKII 630
>gi|262381717|ref|ZP_06074855.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|423336431|ref|ZP_17314178.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
gi|262296894|gb|EEY84824.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|409240906|gb|EKN33680.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
Length = 640
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 239/460 (51%), Gaps = 42/460 (9%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LNRSQ AV + + +S++ GPPGTGKT T +Y+ + + V+VCA SN A
Sbjct: 185 FPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VIVCAQSNTA 243
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
VD ++EK+ G+ V+R+ +R D +SF R E + + +L +++ +
Sbjct: 244 VDCISEKLVDRGINVLRIGNPTR-INDKMLSF----TYERRFESHPDYPELWSIRKAVRD 298
Query: 621 LSSADEKRYRM------------------LKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
+ S K+ R L+ + L D A V+ CT VG+ + ++
Sbjct: 299 IQSNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRIMMNR 358
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
F ++ IDE+ QA E C + I A ++IL GDH QL P + C +A R GL ++L +++
Sbjct: 359 HFTTLFIDEAAQALEAACWI-AISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKI 417
Query: 723 VVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
L ++QYRMH ++ +F S +FY L++ R + ++D P D
Sbjct: 418 AHAKPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSEC 477
Query: 782 FYVTQGQEEIAGSGTSYVNRTEA--------SNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
+ +EE S VNR EA S ++KI+ R + G+I+PY+ Q
Sbjct: 478 DFTENTREETM----SRVNRQEAELLVEQLRSYIQKISKE--RVLEENIDFGLISPYKAQ 531
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
+ ++ + Q + + + I V +VD FQG+E+D+I++S VR+N+ IGFLND RR+
Sbjct: 532 VQY-IRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRM 590
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
NVA+TRA+ ++++G+ L++ + L N+ ++ ++
Sbjct: 591 NVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKII 630
>gi|448105212|ref|XP_004200439.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|448108344|ref|XP_004201070.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359381861|emb|CCE80698.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
gi|359382626|emb|CCE79933.1| Piso0_003026 [Millerozyma farinosa CBS 7064]
Length = 1934
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 253/517 (48%), Gaps = 91/517 (17%)
Query: 504 DLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIV-YQLVKQ--------------- 546
++NRSQ A+ Q SLIQGPPGTGKT T IV Y L K
Sbjct: 1292 NVNRSQASAILGTYKQDGFSLIQGPPGTGKTKTILGIVGYALAKSQNNSISVPTNTQGSN 1351
Query: 547 ---TGSPVLVCAPSNIAVDQLTEKIHR---------TGLKVVRVCAKSREAIDSPVSFLA 594
S +L+CAPSN AVD+L ++ + L VVR+ +AI+S V L
Sbjct: 1352 KQVNNSKLLICAPSNAAVDELVLRLRQGVKSSSGESMNLSVVRLGRS--DAINSSVRDLT 1409
Query: 595 LH----NQIRNMEMNS------------------ELKKLLQ---LKEET-----GELSSA 624
L Q+++ N+ L++LLQ L EE EL +
Sbjct: 1410 LEELVDKQLQSQATNTMSDPTIRTEHTKCVSERNRLRELLQQPNLTEEEVTKYEDELRAV 1469
Query: 625 DEKRYRMLKKNAEK--------------------SLLDNADVICCTCVGAGDPRL--LKI 662
+ KR + K+ E+ +L A+VIC T G+ L + +
Sbjct: 1470 NRKRNELAKRLDEQRERVSIAFRTREIERRQLQSKILSEANVICSTLSGSAHDFLASMNM 1529
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
F ++IDE+ Q E ++P+ G K+ I+VGD QL P V+ + A+ QSLF R+
Sbjct: 1530 VFDQVIIDEACQCVELSALIPLRYGCKKCIMVGDPNQLPPTVLSQVASSFNYEQSLFVRM 1589
Query: 723 -VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
+ L++QYRMHP++S+FPS FY L +G E L++ ++ P P
Sbjct: 1590 QKKYPSHVYLLDIQYRMHPDISRFPSAEFYNSRLHDGEGMKE--LNQREWHSDFPLSPYR 1647
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQRAFLV 838
F+ G+ + + S N +EA ++ ++ + E +IG+I+PY+ Q L
Sbjct: 1648 FFNITGKHKQSEYTRSLYNYSEAQVALEMVKTLMKILPQNEFSGRIGIISPYKEQIRVLK 1707
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
++ + I EI+ +VD FQG+EK++IIMSCVR++D +GFL+D RR+NVALT
Sbjct: 1708 D--VFRKNYGQTILNEIDFNTVDGFQGQEKEIIIMSCVRASDSGNVGFLSDVRRMNVALT 1765
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
RA+ + ++GN + LS+ WN+LL KE+ + +
Sbjct: 1766 RARTTLWILGNKESLSRNKTWNHLLEDAKERDAVTDA 1802
>gi|302306881|ref|NP_983306.2| ACL098Cp [Ashbya gossypii ATCC 10895]
gi|299788730|gb|AAS51130.2| ACL098Cp [Ashbya gossypii ATCC 10895]
Length = 657
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 177/551 (32%), Positives = 265/551 (48%), Gaps = 76/551 (13%)
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVS 472
V+ D G+ L+L+S++ T + ++ RM+ LRK A +S
Sbjct: 107 QVVVALDEGGEAAALQLQSASSVVMVKTV--------NTVTYKRMESTLRKLAEHGDEIS 158
Query: 473 AYIYHRLLGHNVDEVLFRCHLPKHFSAP------NLPDLNRSQVYAVKHAIQRPLSLIQG 526
I LL C P H P + PDLN SQ AV A++ +S+I G
Sbjct: 159 NPIAQYLL----------CQRPFHAQPPEQGVEFHNPDLNASQRDAVAFALRNEISIIHG 208
Query: 527 PPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT--GLKVVRVCAKSR- 583
PPGTGKT T ++ QL + G VLVC PSNIAVD + E++ R G +++RV +R
Sbjct: 209 PPGTGKTHTLVELIRQLYDR-GHRVLVCGPSNIAVDTVLERLSRPIPGAELLRVGHPARL 267
Query: 584 --EAIDSPVSFLALHNQ----IRNM--EMNSELKKLLQLKEETGELSSADE-----KRYR 630
+ + LA +R++ E+N + + ++K + E K +
Sbjct: 268 LPGNLAHSLDILAKEGDGGSIVRDIGREINQRIADVRKIKSSRDRKKAWQEVRDLRKELK 327
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------FHSILIDESMQATEPECMVPV 684
++N L+ A V+ CT G+ L + F +++IDE Q+ EP+C +P+
Sbjct: 328 QRERNVVSELILAARVVVCTLHGSSAYSLCHMYDKCARLFDTVIIDEVSQSLEPQCWIPL 387
Query: 685 IL----GAKQLILVGDHCQLGPVVMCKKAA--RAGLSQSLFERLVVLGIRPFR--LEVQY 736
I +L++ GD+ QL P V + A R LS ++F++L F+ L+VQY
Sbjct: 388 ISHYQSNISKLVIAGDNKQLPPTVKTEDDAHVRQVLSTTIFDKLERHYGDQFKKLLDVQY 447
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDKPMLFYVTQGQ---- 788
RM+ + F S Y G L+ + L+ D P P+++Y TQG
Sbjct: 448 RMNERIMAFASESLYAGKLKAWQGVASQTLA--DLPGVDESDDTSAPLVWYDTQGDDFPE 505
Query: 789 -EEIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
EE AG S N EA V ++ C + E IGVI+PY Q A L + + Q
Sbjct: 506 AEEAAGGPALMASKFNENEAYLVLHHISQLRACNVPQEAIGVISPYNAQVALLKKIIHGQ 565
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
L +E++SVD FQGREK+ I++S VRSND +GFL D RRLNVA+TRA+ +
Sbjct: 566 HPL-------VEISSVDGFQGREKECIVLSLVRSNDSFDVGFLRDERRLNVAMTRARRQL 618
Query: 905 IVIGNPKVLSK 915
VIGN + L +
Sbjct: 619 CVIGNMETLER 629
>gi|358385072|gb|EHK22669.1| hypothetical protein TRIVIDRAFT_191377 [Trichoderma virens Gv29-8]
Length = 2021
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 258/557 (46%), Gaps = 120/557 (21%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQL-------------------- 543
LNR Q AV A + +LIQGPPGTGKT T +V L
Sbjct: 1315 LNRGQALAVLGAQENDGFTLIQGPPGTGKTKTIVAMVGSLLSEQLAQAPLAAAGVPLGVP 1374
Query: 544 VKQTGSP---------VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR----------E 584
V+ G+P +LVCAPSN AVD+L ++ ++G+K V K+R E
Sbjct: 1375 VRPIGAPAGNQARPKKLLVCAPSNAAVDELVLRL-KSGIKTVN--GKTRNINVLRLGRSE 1431
Query: 585 AIDSPVSFLALHNQIR-NMEMNSELKKL-----------LQLKEETGELS-SADEKR--- 628
AI++ V + L ++ +E ++ K QLKE+ +L DE R
Sbjct: 1432 AINAAVKDVTLDELVKARLEGDTTKDKAKADRDKLHEEAAQLKEQLAQLRPRLDESRNQD 1491
Query: 629 ---------------------------------------YRMLKKNAEKSLLDNADVICC 649
+ ++ ++ +L++A V+C
Sbjct: 1492 DRSLHNSLSRQFDELKRKQIQIGKQIDANKDSGNSIAREMELRRRQIQQEILNSAHVLCA 1551
Query: 650 TCVGAGDP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCK 707
T G+G R L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ +
Sbjct: 1552 TLSGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQ 1611
Query: 708 KAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
AAR G QSLF R+ + L ++QYRMHPE+S FPS FYE LQ+G + L
Sbjct: 1612 SAARFGYDQSLFVRMQQNHPKSIHLLDMQYRMHPEISSFPSREFYESQLQDG----QDML 1667
Query: 767 SKIDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR----CGMK 820
PW P F+ +G +E G S VN E ++ RF R C +
Sbjct: 1668 QLRQAPWHKDTLFAPYRFFDVEGVQEKGRKGQSLVNTRELEVALQMYERFSRDYHECDLT 1727
Query: 821 PEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND 880
+IG+ITPY+ Q L ++Q I IE + DAFQGRE ++II SCVR++
Sbjct: 1728 -RKIGIITPYKAQLYEL--RSRFQARYGENITNIIEFNTTDAFQGRECEIIIFSCVRASA 1784
Query: 881 HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNL 940
GIGF+ D RR+NV LTRAK + ++G+ + L + W L+ +++ +G +
Sbjct: 1785 TGGIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIVDAQDRDRYTKGDI--- 1841
Query: 941 KESLILFSKPKQYFKKN 957
L +F +P + K N
Sbjct: 1842 ---LSMFRRPLEKAKPN 1855
>gi|402304960|ref|ZP_10824023.1| AAA domain protein [Prevotella sp. MSX73]
gi|400380746|gb|EJP33559.1| AAA domain protein [Prevotella sp. MSX73]
Length = 621
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 246/467 (52%), Gaps = 46/467 (9%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+ P LN +Q AV ++ + ++++ GPPGTGKT T + + + + S V+VCA
Sbjct: 166 FAPTRFPWLNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRE-SQVMVCA 224
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD + EK+ G+ V+R+ SR D +SF R E + + +L ++
Sbjct: 225 QSNMAVDWICEKLTDRGINVLRIGNPSR-VNDKMLSF----TYERRFESHPDYPQLWAIR 279
Query: 616 EETGELSSA--------DEKRYRMLKKNAE------KSLLDNADVICCTCVGAGDPRLLK 661
+ EL S +K R+ + AE L A VI T VG+ L
Sbjct: 280 KTIRELRSRRRRGSGDYHQKLERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDG 339
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
K+ ++ IDE+ QA E C +P I A +++L GDHCQL P V A RAGL ++L ER
Sbjct: 340 QKYATLFIDEAAQALEAACWIP-IRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMER 398
Query: 722 LV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+V V+ + L+VQYRM+ ++ +F S++FY G + + R + D P
Sbjct: 399 IVENKPEVVTL----LKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWK 454
Query: 777 DKPMLFYVTQGQE-EIAG-----SGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI-- 824
+ + G+E E AG S +N+ EA +E+ T+ + + E+I
Sbjct: 455 TNSLTPSPSSGEEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKQRILDERIDV 514
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQG 883
G+I+PY Q +L Q ++ + K Y++ I V +VD FQG+E+D+I++S VRSND
Sbjct: 515 GIISPYRAQVQYLRQLIRKREFF--KPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQ 572
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
IGFL D RR+NVA+TRA+ +I++G+ L + P + L + ++ K
Sbjct: 573 IGFLRDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEYIEKIK 619
>gi|346979330|gb|EGY22782.1| DNA-binding protein SMUBP-2 [Verticillium dahliae VdLs.17]
Length = 649
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 235/470 (50%), Gaps = 72/470 (15%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ QLV++ +LVC PSNI+V
Sbjct: 166 PSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQLVRRDQR-ILVCGPSNISV 224
Query: 562 DQLTEKIHRTGLKVVR----------VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL 611
D + E++ + ++R V A S + + S A+ +R EM+++ L
Sbjct: 225 DNIVERLAPHKIPIIRLGHPARLLPSVLAHSLDVLTHTSSAGAIVQDVR-AEMDAKQASL 283
Query: 612 LQLKEETGELSSAD-------EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF 664
K TG A K YR ++ + L+ + V+ T GAG +L KF
Sbjct: 284 K--KARTGRDRRAIYADLKDLRKEYRERERGCLRELVGGSKVVLATLHGAGGFQLRDEKF 341
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV--------MCKKAAR----- 711
++IDE+ QA E +C VP +L A +++ GDH QL P + M KK
Sbjct: 342 DVVIIDEASQALEAQCWVP-LLRANKVVCAGDHLQLPPTIKSLNSKTNMPKKKDEEEVPI 400
Query: 712 ---AGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
L +LF+RL+ L + L QYRMH + +FPS+ YEG L R L
Sbjct: 401 VKGMTLETTLFDRLLSLHGPSIKRMLITQYRMHEAIMRFPSDELYEGRLVAAESVATRLL 460
Query: 767 SKIDFPWPVPD-----KPMLFYVTQG----------------QEEIAGSGTSYVNRTEAS 805
D P+ V D +P++F TQG + +++ +G S N EA+
Sbjct: 461 K--DMPYAVQDTEDTNEPLVFIDTQGGDFPEKSEEDSDDAAKKAKLSLNGESKSNEMEAA 518
Query: 806 NVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
V + + + G+KPE I V+TPY Q A L + LP IE+ SVD FQG
Sbjct: 519 VVRQHARQLVEAGIKPEDIAVVTPYNAQLALLAP---LKEELPG-----IELGSVDGFQG 570
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
REK+ +I+S VRSN +GFL + RRLNVA+TR K + V+G+ + + +
Sbjct: 571 REKEAVIVSLVRSNGDGEVGFLAEKRRLNVAMTRPKRSLTVVGDSETVKR 620
>gi|423345058|ref|ZP_17322747.1| hypothetical protein HMPREF1060_00419 [Parabacteroides merdae
CL03T12C32]
gi|409222844|gb|EKN15781.1| hypothetical protein HMPREF1060_00419 [Parabacteroides merdae
CL03T12C32]
Length = 639
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 158/518 (30%), Positives = 253/518 (48%), Gaps = 43/518 (8%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
V + TS+ M AL + AY+ LLG V R P F P
Sbjct: 136 VQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKT--PVGRRTFFPMRF-----PW 188
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV H + + +S++ GPPGTGKT T +Y+ + + V+VCA SN AVD
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCAQSNTAVDW 247
Query: 564 LTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLALHNQIRNMEMNSELK 609
++EK+ G+ V+R+ +R E+ + IR E+ S L+
Sbjct: 248 ISEKLVDRGIHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIR--EIQSNLR 305
Query: 610 KLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSI 667
K ++ET + R+R L+ + L D A V+ CT VG+ + L F ++
Sbjct: 306 KKSHGEKETAR-NRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTL 364
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
IDE+ QA E C + I A ++IL GDH QL P + C +AAR GL +L +++
Sbjct: 365 FIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRKP 423
Query: 728 RPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ 786
L + QYRM+ ++ +FPS +FY LQ+ R + + D P D +
Sbjct: 424 ETVSLLKTQYRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHF--- 480
Query: 787 GQEEIAGSGTSYVNRTEASNVEKITTRFI------RCGMKPEQIGVITPYEGQRAFLVQH 840
+E+ S +NR EA+ + ++I R + G+I+PY+ Q + ++
Sbjct: 481 -EEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQY-IRG 538
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
+ + + + I +VD FQG+E+D+I++S VR+ND IGFL D RR+NVA+TRA
Sbjct: 539 LIKRDTFFKPFRRLITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRA 598
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKE--QKVLVEGP 936
+ ++++G+ L++ + L + E Q + V+ P
Sbjct: 599 RMKLMILGDAPTLTRHAFYKELYEYIWENGQVITVQPP 636
>gi|328862576|gb|EGG11677.1| hypothetical protein MELLADRAFT_33290 [Melampsora larici-populina
98AG31]
Length = 349
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 183/350 (52%), Gaps = 17/350 (4%)
Query: 608 LKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFH 665
+ +L Q +E + +A ++ + +L +ADVIC T G+G + L F
Sbjct: 1 MHELSQQLDEARDQQAASKRYLDAATRKLRMQILQDADVICSTLSGSGHDYMSQLPFDFE 60
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
+++IDE+ Q TEP ++P+ A Q ILVGD QL P V+ + A++AG QSLF R+
Sbjct: 61 TVVIDEACQCTEPASLIPLRYNATQCILVGDPLQLPPTVLSQAASKAGYDQSLFVRMQRF 120
Query: 726 GIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK---PML 781
L +QYRMHP +S FPS FY+ L +G R + W D P
Sbjct: 121 APTAVHLLSIQYRMHPAISAFPSKAFYDSRLMDGPDMASRTTQR----WHTEDTFFPPYT 176
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQRAFLV 838
FY G E G S++NRTEA I +R R + ++G+IT Y GQ +
Sbjct: 177 FYHPIGAREERGRHHSFINRTEAGMTVAIYSRLTRTFPDIDFAYRVGIITAYAGQVGEI- 235
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS--NDHQGIGFLNDPRRLNVA 896
Q++ S PA + +++ +VD FQG+EKD+II+SCVR +D GIGFL D RR+NVA
Sbjct: 236 -RRQFRQSFPADVVSTLDINTVDGFQGQEKDIIILSCVRGGKDDDNGIGFLKDTRRMNVA 294
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
LTRAK + VIGN L + W L++ +E+ E + LI
Sbjct: 295 LTRAKSSLFVIGNQSALVQDKNWKALIDDARERGTFSEVHFQSYISILIF 344
>gi|121711100|ref|XP_001273166.1| DNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119401316|gb|EAW11740.1| DNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 760
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 159/475 (33%), Positives = 236/475 (49%), Gaps = 75/475 (15%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ Q+VK+ VLVC PSNI+V
Sbjct: 244 PTLNDSQKEAIRFALASRDVALIHGPPGTGKTHTLIELIIQMVKRK-LRVLVCGPSNISV 302
Query: 562 DQLTEKIHRTGLKVVRVCAKSR----------EAIDSPVSFLALHNQIRNM--EMNSELK 609
D + E++ + +VR+ +R E + A+ +R E + ++
Sbjct: 303 DNIVERLALKKVPIVRIGHPARLLPSVLEHSLEVLTHTSEAAAIVKDVRKEIDEKQASIR 362
Query: 610 KLLQLKEETGELSSADEKR--YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSI 667
K +E E R YR + +L+ + V+ T GAG +L KF +
Sbjct: 363 KTKSGRERRAIYGDLKELRREYRDRESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVV 422
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC-----KKAARAG--------- 713
+IDE+ QA E +C + +L A +++L GDH QL P V K A G
Sbjct: 423 VIDEASQALEAQCWIS-LLSASKVVLAGDHLQLPPTVKSTVQKSKSAKTKGQSNTKSGST 481
Query: 714 ------------LSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
L ++F+RL+ L GI+ L QYRMH ++ +FPS+ YE L
Sbjct: 482 DASDADIIGGVSLETTMFDRLLALHGPGIKRM-LTTQYRMHEKIMQFPSDELYESRL--- 537
Query: 759 VCADERKLSKI-DFPWPVPD-----KPMLFYVTQG--------QEEIAGS----GTSYVN 800
+ AD KL + D P+ V + +P++F+ TQG +EI G S N
Sbjct: 538 IAADSVKLRLLKDLPYEVEETDDTKEPLVFWDTQGGDFPEKTEDDEIGKKEALLGESKSN 597
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
EA V K I+ G++PE I ITPY GQ A L ++ + Y +E+ SV
Sbjct: 598 EMEALVVVKHVDNLIQSGVRPEDIACITPYNGQLALLSSMLREK-------YPGLELGSV 650
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
D FQGREK+ +++S VRSN +GFL + RRLNVA+TR K + + G+ + +SK
Sbjct: 651 DGFQGREKEAVVVSLVRSNPENEVGFLGEKRRLNVAMTRPKRHLCICGDAETISK 705
>gi|60683002|ref|YP_213146.1| DNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|60494436|emb|CAH09232.1| putative DNA-binding protein [Bacteroides fragilis NCTC 9343]
Length = 634
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 234/452 (51%), Gaps = 38/452 (8%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L + +G L + ++ +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NV
Sbjct: 539 L--RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNV 596
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
A+TRA+ ++++G+ +SK + L+ + +
Sbjct: 597 AITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|423270406|ref|ZP_17249377.1| hypothetical protein HMPREF1079_02459 [Bacteroides fragilis
CL05T00C42]
gi|423275362|ref|ZP_17254307.1| hypothetical protein HMPREF1080_02960 [Bacteroides fragilis
CL05T12C13]
gi|392698330|gb|EIY91512.1| hypothetical protein HMPREF1079_02459 [Bacteroides fragilis
CL05T00C42]
gi|392702843|gb|EIY95988.1| hypothetical protein HMPREF1080_02960 [Bacteroides fragilis
CL05T12C13]
Length = 634
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 234/452 (51%), Gaps = 38/452 (8%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L + +G L + ++ +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NV
Sbjct: 539 L--RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNV 596
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
A+TRA+ ++++G+ +SK + L+ + +
Sbjct: 597 AITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|336410631|ref|ZP_08591107.1| hypothetical protein HMPREF1018_03124 [Bacteroides sp. 2_1_56FAA]
gi|335944206|gb|EGN06030.1| hypothetical protein HMPREF1018_03124 [Bacteroides sp. 2_1_56FAA]
Length = 634
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 234/452 (51%), Gaps = 38/452 (8%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L + +G L + ++ +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NV
Sbjct: 539 L--RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNV 596
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
A+TRA+ ++++G+ +SK + L+ + +
Sbjct: 597 AITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|315607147|ref|ZP_07882151.1| helicase [Prevotella buccae ATCC 33574]
gi|315251201|gb|EFU31186.1| helicase [Prevotella buccae ATCC 33574]
Length = 634
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 246/467 (52%), Gaps = 46/467 (9%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+ P LN +Q AV ++ + ++++ GPPGTGKT T + + + + S V+VCA
Sbjct: 179 FAPTRFPWLNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRE-SQVMVCA 237
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD + EK+ G+ V+R+ SR D +SF R E + + +L ++
Sbjct: 238 QSNMAVDWICEKLTDRGINVLRIGNPSR-VNDKMLSF----TYERRFESHPDYPQLWAIR 292
Query: 616 EETGELSSA--------DEKRYRMLKKNAE------KSLLDNADVICCTCVGAGDPRLLK 661
+ EL S +K R+ + AE L A VI T VG+ L
Sbjct: 293 KTIRELRSRRRRGSGDYHQKLERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDG 352
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
K+ ++ IDE+ QA E C +P I A +++L GDHCQL P V A RAGL ++L ER
Sbjct: 353 QKYATLFIDEAAQALEAACWIP-IRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMER 411
Query: 722 LV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+V V+ + L+VQYRM+ ++ +F S++FY G + + R + D P
Sbjct: 412 IVENKPEVVTL----LKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWK 467
Query: 777 DKPMLFYVTQGQE-EIAG-----SGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI-- 824
+ + G+E E AG S +N+ EA +E+ T+ + + E+I
Sbjct: 468 TNSLTPSPSSGEEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKQRILDERIDV 527
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQG 883
G+I+PY Q +L Q ++ + K Y++ I V +VD FQG+E+D+I++S VRSND
Sbjct: 528 GIISPYRAQVQYLRQLIRKREFF--KPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQ 585
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
IGFL D RR+NVA+TRA+ +I++G+ L + P + L + ++ K
Sbjct: 586 IGFLRDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEYIEKIK 632
>gi|288926626|ref|ZP_06420541.1| DNA helicase [Prevotella buccae D17]
gi|288336595|gb|EFC74966.1| DNA helicase [Prevotella buccae D17]
Length = 634
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/467 (33%), Positives = 246/467 (52%), Gaps = 46/467 (9%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+ P LN +Q AV ++ + ++++ GPPGTGKT T + + + + S V+VCA
Sbjct: 179 FAPTRFPWLNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRE-SQVMVCA 237
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD + EK+ G+ V+R+ SR D +SF R E + + +L ++
Sbjct: 238 QSNMAVDWICEKLTDRGINVLRIGNPSR-VNDKMLSF----TYERRFESHPDYPQLWAIR 292
Query: 616 EETGELSSA--------DEKRYRMLKKNAE------KSLLDNADVICCTCVGAGDPRLLK 661
+ EL S +K R+ + AE L A VI T VG+ L
Sbjct: 293 KTIRELRSRRRRGSGDYHQKMERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDG 352
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
K+ ++ IDE+ QA E C +P I A +++L GDHCQL P V A RAGL ++L ER
Sbjct: 353 QKYATLFIDEAAQALEAACWIP-IRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMER 411
Query: 722 LV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
+V V+ + L+VQYRM+ ++ +F S++FY G + + R + D P
Sbjct: 412 IVENKPEVVTL----LKVQYRMNEQIMRFSSDWFYHGEVVSAPQIRHRGILDYDHPMEWK 467
Query: 777 DKPMLFYVTQGQE-EIAG-----SGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI-- 824
+ + G+E E AG S +N+ EA +E+ T+ + + E+I
Sbjct: 468 TNSLTPSPSSGEEGEAAGESFVSSSFGRINKGEAELTLGTLEEYFTKIGKRRILDERIDV 527
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQG 883
G+I+PY Q +L Q ++ + K Y++ I V +VD FQG+E+D+I++S VRSND
Sbjct: 528 GIISPYRAQVQYLRQLIRKREFF--KPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQ 585
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
IGFL D RR+NVA+TRA+ +I++G+ L + P + L + ++ K
Sbjct: 586 IGFLRDLRRMNVAITRARMKLIILGDVSTLGRHPFYKKLWEYIEKIK 632
>gi|239610200|gb|EEQ87187.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ER-3]
Length = 2114
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 262/545 (48%), Gaps = 114/545 (20%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------YQLVKQTGSPV-- 551
++N +Q AV+ A+ +LIQGPPG+GKT T +V Q + + GS V
Sbjct: 1291 NVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPGSSVNL 1350
Query: 552 ------------LVCAPSNIAVDQL---------TEKIHRTGLKVVRVCAKSREAIDSPV 590
LVCAPSN AVD+L T + + VVR+ +AI+S V
Sbjct: 1351 KPATRTTNSKKLLVCAPSNAAVDELVMRFKEGVVTSSGQKQNISVVRL--GRSDAINSNV 1408
Query: 591 ---------------------------SFLALH-------NQIRN---------MEMNSE 607
++ + H N++R+ + SE
Sbjct: 1409 IDVTLDELVNAKLGQNGRKNGNEKDLQTYYSEHKEACTQFNEVRDRLDQCRAKGQGVPSE 1468
Query: 608 LKKLLQL-KEETGELSSADE----------KRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A + + + +K ++ ++D A VIC T G+G
Sbjct: 1469 LEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGH 1528
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K A+R
Sbjct: 1529 EMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQY 1588
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
QSLF R+ + L+ QYRMHPE+S+FPS FY+G LQ+G + ++ PW
Sbjct: 1589 EQSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVR----PW 1644
Query: 774 PVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVIT 828
+ P F+ QG A G S VN E K+ R I R +IG+IT
Sbjct: 1645 HKSELLGPYRFFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIIT 1704
Query: 829 PYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
PY+GQ ++ M Q+ I+ ++E + DAFQGRE ++II SCVR+++ +GIGF
Sbjct: 1705 PYKGQ----LREMKNQFANKYGNSIFTKVEFNTTDAFQGRECEVIIFSCVRASN-RGIGF 1759
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
L D RR+NV LTRAK + V+GN + L + WN L+ + + + +G + L L
Sbjct: 1760 LADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQG------DVLHL 1813
Query: 947 FSKPK 951
KP+
Sbjct: 1814 LQKPQ 1818
>gi|261192749|ref|XP_002622781.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
gi|239589263|gb|EEQ71906.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis SLH14081]
Length = 2114
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 262/545 (48%), Gaps = 114/545 (20%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------YQLVKQTGSPV-- 551
++N +Q AV+ A+ +LIQGPPG+GKT T +V Q + + GS V
Sbjct: 1291 NVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPGSSVNL 1350
Query: 552 ------------LVCAPSNIAVDQL---------TEKIHRTGLKVVRVCAKSREAIDSPV 590
LVCAPSN AVD+L T + + VVR+ +AI+S V
Sbjct: 1351 KPATRTTNSKKLLVCAPSNAAVDELVMRFKEGVVTSSGQKQNISVVRLGRS--DAINSNV 1408
Query: 591 ---------------------------SFLALH-------NQIRN---------MEMNSE 607
++ + H N++R+ + SE
Sbjct: 1409 IDVTLDELVNAKLGQNGRKNGNEKDLQTYYSEHKEACTQFNEVRDRLDQCRAKGQGVPSE 1468
Query: 608 LKKLLQL-KEETGELSSADE----------KRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A + + + +K ++ ++D A VIC T G+G
Sbjct: 1469 LEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGH 1528
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K A+R
Sbjct: 1529 EMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQY 1588
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
QSLF R+ + L+ QYRMHPE+S+FPS FY+G LQ+G + ++ PW
Sbjct: 1589 EQSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVR----PW 1644
Query: 774 PVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVIT 828
+ P F+ QG A G S VN E K+ R I R +IG+IT
Sbjct: 1645 HKSELLGPYRFFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIIT 1704
Query: 829 PYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
PY+GQ ++ M Q+ I+ ++E + DAFQGRE ++II SCVR+++ +GIGF
Sbjct: 1705 PYKGQ----LREMKNQFANKYGNSIFTKVEFNTTDAFQGRECEVIIFSCVRASN-RGIGF 1759
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
L D RR+NV LTRAK + V+GN + L + WN L+ + + + +G + L L
Sbjct: 1760 LADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQG------DVLHL 1813
Query: 947 FSKPK 951
KP+
Sbjct: 1814 LQKPQ 1818
>gi|168051009|ref|XP_001777949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670709|gb|EDQ57273.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 791
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 162/510 (31%), Positives = 257/510 (50%), Gaps = 56/510 (10%)
Query: 461 LRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP----NLPD--LNRSQVYAVK 514
L+K + Q+ +A + L G D + P ++P +L + L+ SQ A++
Sbjct: 266 LQKNGLKRQNPAAAVVATLFGEGPDICWLAQNGPLRPASPVQQSSLKEVRLDESQKRAIE 325
Query: 515 HAI--QRPLSLIQGPPGTGKTVTSATIVYQLVKQT---GSPVLVCAPSNIAVDQLTEKIH 569
+ +RP+ +IQGPPGTGKT ++V +L+++ G VL AP+N AVD + E++
Sbjct: 326 MGLDRKRPVVVIQGPPGTGKT----SVVTELIEKAVMRGERVLATAPTNAAVDNIVERLA 381
Query: 570 RTGLKVVRVCAKSREA-----------IDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
GL VVRV +R A +D ++ R + S+L++ L
Sbjct: 382 NAGLNVVRVGNPARVAPAVCSRSLSFIVDKSLTTFRGDLVRRRANLRSDLRECLDNDSVA 441
Query: 619 GELSSADEKRYRMLKKNAEKSL---LDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQ 674
+ ++ + LK+ ++++ L +A VI CT GAGDP + K + F +++DE+ Q
Sbjct: 442 AGIRQVLKQLGKSLKQKEKEAINDALSSAQVILCTNTGAGDPLIRKQEAFDLVVVDEAAQ 501
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRL 732
A EP C +P++ G ++ +L GD QL P +M + A GL SL ER L G+ L
Sbjct: 502 AIEPSCWIPLLQG-RRCVLAGDASQLAPTIMSRTALDGGLGVSLMERAGNLHSGLLSTML 560
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDKPMLFYVTQ-- 786
QYRMH ++ + S+ Y GSL++ L D P PV PML T+
Sbjct: 561 STQYRMHSAIADWASHEMYGGSLRSAPAVASHLLR--DTPGVKDTPVTKVPMLLLDTRLP 618
Query: 787 ------GQEEI---AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
G EE AG+G S+ N EA V + G++P I V +PY Q L
Sbjct: 619 FGSLIPGCEERLDPAGTG-SFYNEGEADIVVDHIRALLATGVEPSSIAVQSPYMAQVQLL 677
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
++ +P + ++VASVD+FQGRE D +++S VRSN+ +GFL D RR+NVA+
Sbjct: 678 CDRIE---EIPGA--EGVQVASVDSFQGREADAVVVSMVRSNNIGVVGFLGDNRRMNVAV 732
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
TRA+ + ++ + +S+ LL +
Sbjct: 733 TRARKHVTIVCDSTTVSRNSFLQRLLQHIR 762
>gi|393219539|gb|EJD05026.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 791
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 234/477 (49%), Gaps = 65/477 (13%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---QTGSPVLVCAP 556
P L LN SQ+ A+ I +SLIQGPPGTGKT T V +L+K + P+LVC
Sbjct: 252 PPLNHLNASQIRAMAMMIGERISLIQGPPGTGKTKTIVETV-KLLKGHFEVPHPILVCTF 310
Query: 557 SNIAVDQLTEKIHRTGLKVVRV----CAKSR-------EAIDS-PVSFLALHNQIRNME- 603
+N+A+D L E GLK +RV AK E D P L I+ E
Sbjct: 311 TNVAIDNLLEGFANGGLKPLRVGNEGSAKPELQEYMFDEQFDGHPKKAAELDPLIKEYEE 370
Query: 604 MNSELKKLLQ--------------LKEETGELSSADEKRYR---------MLKKNAEKSL 640
++S ++KL + K E +L D K YR +L+++ +
Sbjct: 371 LDSRIRKLRKDIKALEDEKPTNWIEKRENMKLD-MDRKSYRSYILKARARLLRESIFYDI 429
Query: 641 LDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQL 700
ADVIC T + + L + F + +DE+ +TEP ++P++ G K L L+GDH QL
Sbjct: 430 CTKADVICTTSIRSASYYLQTMDFPVVFLDEASMSTEPASLIPLMKGCKHLALIGDHKQL 489
Query: 701 GPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNG- 758
PVV+ + A + L SLFERL+ G P L+VQYRMHP +SKFPS FY+ L +G
Sbjct: 490 PPVVVSRDAQQGELDVSLFERLISEGDVPSVMLDVQYRMHPGISKFPSMEFYDTMLLDGT 549
Query: 759 -----VCADERKLSK---IDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
V LS + P ++F +G E A S VN TE + I
Sbjct: 550 VHAGEVIPSLMPLSSSHLVAHPETGHRPSVIFIDHEGPE--ATKSRSRVNWTEGYIICSI 607
Query: 811 TTRFIRCG--MKPEQIGVITPYEGQRAFLVQHMQ--------YQGSLPAKIYQ--EIEVA 858
+R + E IGVI PY+ Q L + ++ ++ L + + IEV
Sbjct: 608 VEDLLRLNPDLLGEDIGVIAPYKSQMNLLTRLLKKDDEVRDHFKAHLGDRALEVPNIEVK 667
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
+VD F+GREK II S VR+N IGFL D RRLNV LTRAK + V+G+ L +
Sbjct: 668 TVDGFEGREKQAIIFSTVRNNQFGHIGFLADRRRLNVGLTRAKRALFVVGSMSTLER 724
>gi|423251575|ref|ZP_17232588.1| hypothetical protein HMPREF1066_03598 [Bacteroides fragilis
CL03T00C08]
gi|423254898|ref|ZP_17235828.1| hypothetical protein HMPREF1067_02472 [Bacteroides fragilis
CL03T12C07]
gi|392649760|gb|EIY43433.1| hypothetical protein HMPREF1066_03598 [Bacteroides fragilis
CL03T00C08]
gi|392653464|gb|EIY47120.1| hypothetical protein HMPREF1067_02472 [Bacteroides fragilis
CL03T12C07]
Length = 634
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 235/452 (51%), Gaps = 38/452 (8%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K + E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKSSYSEREAAH-SRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L + +G L + ++ +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NV
Sbjct: 539 L--RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNV 596
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
A+TRA+ ++++G+ +SK + L+ + +
Sbjct: 597 AITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|452824984|gb|EME31983.1| DNA helicase, putative [Galdieria sulphuraria]
Length = 907
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 265/534 (49%), Gaps = 74/534 (13%)
Query: 449 WKSTSFDRMQLALRKFAVDDQSVSAY-IYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+++ + R AL + D + AY I L N E LF P++ P+LN
Sbjct: 147 FENITMKRCLKALEELESMDSNHRAYSIRQTLFMENNYEKLFV--RPENVEFQPDPELNS 204
Query: 508 SQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTE 566
SQ A + P+++I GPPGTGKT T ++ +L+ Q G +LVCAPSN+AVD + E
Sbjct: 205 SQNQACFMGTWKYPITVIHGPPGTGKTTTLVALIRKLL-QRGETLLVCAPSNVAVDNVME 263
Query: 567 KI-----HRTGLKVVRVCAKSREAIDSPVSFLALHN------QIRNMEMNSELKKLLQLK 615
+ H + L++ + E +++ N + MEM S + L K
Sbjct: 264 MLIKKEPHISALRIGHPARYNSELYKYSMAYQMKENDQGKLLKDIEMEMVSVERSLEHAK 323
Query: 616 E-----ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD----------PRLL 660
+ E ++ + +K ++ K A +I CTC GAGD RL
Sbjct: 324 DRHQQYEWKKVRKSLQKEWKERKSLAMCQSFQQTQIIFCTCAGAGDWTMESLFSNHSRLG 383
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
+ +I+IDE+ QA E C +P++ G K+ IL GD QL P V+ ++A GL++S+ +
Sbjct: 384 RNGLDTIIIDEAGQALESLCWIPLLKG-KRAILAGDPFQLPPTVLSQRAIENGLAKSILD 442
Query: 721 RLV--------VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
R+ ++ + L++QYRMH +S++ S+ FY G L + L D P
Sbjct: 443 RIFQHKQLEQSIVSV----LQIQYRMHLCISEWSSHTFYRGLLSPDKDVECHLLC--DLP 496
Query: 773 WPVPDK----PMLFYVTQGQEEIAGSGTSYV-----------------NRTEASNVEKIT 811
D+ P+L+ T G + I + +S+ NR E +
Sbjct: 497 GVRRDRNTEIPLLWIDTAGCDCIEETESSFADEQTDSFAFLLGYESKRNRNEVQLCFQHL 556
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
+ ++P+QIG+I+PY Q L Q + AK+ +EIE+++VD FQGREK+ I
Sbjct: 557 EELLDAKVEPKQIGIISPYAAQIRELRQRI-------AKLSEEIEISTVDGFQGREKEAI 609
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
I+S VRSND Q +GFL D RR+NVA+TRA+ I +IGN ++ K + + L+++
Sbjct: 610 ILSLVRSNDIQELGFLTDYRRINVAITRARRHICIIGNSDMMEKDSVLSQLVSY 663
>gi|375359786|ref|YP_005112558.1| putative DNA-binding protein [Bacteroides fragilis 638R]
gi|301164467|emb|CBW24025.1| putative DNA-binding protein [Bacteroides fragilis 638R]
Length = 634
Score = 213 bits (541), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 234/452 (51%), Gaps = 38/452 (8%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFIGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L + +G L + ++ +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NV
Sbjct: 539 L--RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNV 596
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
A+TRA+ ++++G+ +SK + L+ + +
Sbjct: 597 AITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|218261116|ref|ZP_03476067.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii
DSM 18315]
gi|218224216|gb|EEC96866.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii
DSM 18315]
Length = 638
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 159/514 (30%), Positives = 254/514 (49%), Gaps = 43/514 (8%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
V + TS+ M AL + AY+ LLG R P F P
Sbjct: 137 VQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKT--PAGRRTLFPMRF-----PW 189
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV H + + +S++ GPPGTGKT T +Y+ + + V+VCA SN AVD
Sbjct: 190 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCAQSNTAVDW 248
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMNSEL 608
++EK+ G+ V+R+ +R D +SF + IR E+ S L
Sbjct: 249 ISEKLVDRGIHVLRIGNPTR-VNDKMLSFTYERRFESHPDYAELWGIRKAIR--EIQSNL 305
Query: 609 KKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
++ ++ETG + R+R L+ + L D A V+ CT VG+ + L F +
Sbjct: 306 RRKSHSEKETGR-NRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTT 364
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG 726
+ IDE+ QA E C + I A ++IL GDH QL P + C +AAR GL +L +++
Sbjct: 365 LFIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRK 423
Query: 727 IRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT 785
L + QYRM+ + +FPS +FY LQ+ R + + D P D +
Sbjct: 424 PETVSLLKTQYRMNESIMRFPSRWFYRDELQSAPEVKHRGILEFDTPVVWLDTADCHF-- 481
Query: 786 QGQEEIAGSGTSYVNRTEA----SNVEKITTRFIRCGMKPEQI--GVITPYEGQRAFLVQ 839
+E+ S +N+ EA S ++K + + + E I G+I+PY+ Q + ++
Sbjct: 482 --EEDQLTDSMSRINKDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQY-IR 538
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
+ + + I V +VD FQG+E+D+I++S VR+ND IGFL D RR+NVA+TR
Sbjct: 539 GLVKRNVFFKPFRRLITVHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITR 598
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
A+ ++++G+ L++ + L + +E +V
Sbjct: 599 ARMKLMILGDAPTLTRHAFYKELYEYIRENGQVV 632
>gi|145509537|ref|XP_001440707.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407935|emb|CAK73310.1| unnamed protein product [Paramecium tetraurelia]
Length = 1517
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 149/502 (29%), Positives = 252/502 (50%), Gaps = 84/502 (16%)
Query: 506 NRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATIV---YQLVKQTGS----PVLVCAP 556
N+SQ +++ I ++ + L+QGPPGTGKT ++ Y+ +K T +L+C P
Sbjct: 849 NKSQANSIREIILKEKGICLVQGPPGTGKTHLLLGLLSGAYEYMKLTNKFPKKKILICTP 908
Query: 557 SNIAVDQLT-----------------------------EKIHRTGLKVVRVCAKSREAID 587
SN A+D++ E IH +K V + ++ +
Sbjct: 909 SNAAIDEIILRIVQKGGLFDSKGNSRQANLIRIGLLDEENIHSEIIKKVSLEDLAQHKLF 968
Query: 588 SPVSFLALHNQIRNMEMNSEL-----------KKLLQ----------LKEETGELSSADE 626
S F A +Q E+ EL KKL Q +KE+ + + +
Sbjct: 969 SSKKFNAEQDQKTTAELRIELCQIQTHVKKLEKKLTQHGLPSDERKIIKEQIMQFNDLRK 1028
Query: 627 KRYRMLKKNAE-------------KSLLDNADVICCTCVGAGDPRLLKI--KFHSILIDE 671
+ L+K + + LL++A++I T +G +L K + +++DE
Sbjct: 1029 TKQEYLEKTKDSKRFHKEFYNQFCEKLLNDAEIIFSTLSSSGSDKLSKYLDQIELLIVDE 1088
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
+ Q TEP ++P+ LG K++IL+GD QL + + ++SLFER++ ++P+
Sbjct: 1089 AAQCTEPSNIIPLRLGIKKMILIGDPKQLPATTFSPVSHQTLYNRSLFERILDNNVKPYF 1148
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEI 791
L++QYRMH E+ FPS +FY+ L++ + R L F ++ + + GQE+
Sbjct: 1149 LDIQYRMHSEIRMFPSEYFYQNKLKDHESTNTRNLPSKFFK----NRVLFLDILDGQEQ- 1203
Query: 792 AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI 851
GTS +N EA + ++ + I+ + IGVI Y+ Q + ++ + Q I
Sbjct: 1204 -KDGTSNINEQEAIVIVQLI-KSIKEEFPTQTIGVICAYKSQVRY-IKTLLKQKFQDENI 1260
Query: 852 YQE--IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+ E I + +VD+FQG+E+D+I+ SCVRS+ GIGFLND RR+NVALTRAK + ++GN
Sbjct: 1261 FDENTISINTVDSFQGQEEDIILFSCVRSSQTGGIGFLNDGRRMNVALTRAKNALFILGN 1320
Query: 910 PKVLSKQPLWNNLLNFYKEQKV 931
LSK LW ++L +++K+
Sbjct: 1321 AITLSKSNLWRSMLKNIQQRKL 1342
>gi|256271560|gb|EEU06603.1| Hcs1p [Saccharomyces cerevisiae JAY291]
Length = 683
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 174/566 (30%), Positives = 283/566 (50%), Gaps = 89/566 (15%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS---TSFDRMQLALRKFAVDD 468
G V K+ D ++ + L+ S +S +I K+ +++RM+ +RK +
Sbjct: 117 GVVYKMSDT---QITIALEESQDVIATTFYSYSKLYILKTINVVTYNRMESTMRKLS--- 170
Query: 469 QSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSL 523
+S+ I +++ + V+E R +P S N+ P+LN SQ A+ AI L++
Sbjct: 171 -EISSPIQDKIIQYLVNE---RPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAINNDLTI 226
Query: 524 IQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLTEKIH---------RTGL 573
I GPPGTGKT T ++ QL +K +L+C PSNI+VD + E++ R G
Sbjct: 227 IHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGH 286
Query: 574 KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR----- 628
+ + R ++D L+ N I +++ E+ KL+Q E +L + +++
Sbjct: 287 PARLLDSNKRHSLD----ILSKKNTIVK-DISQEIDKLIQ---ENKKLKNYKQRKENWNE 338
Query: 629 YRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK--------FHSILIDESM 673
++L+K+ +K L+ + ++ T G+ L + F +++IDE
Sbjct: 339 IKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVS 398
Query: 674 QATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCK--KAARAGLSQSLFERLVVLGIR 728
QA EP+C +P+I Q L+L GD+ QL P + + K L +LF+R++ I
Sbjct: 399 QAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRII--KIF 456
Query: 729 PFR-----LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVPDK- 778
P R L VQYRM+ ++ +FPS+ Y G L R L ID P P D
Sbjct: 457 PKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPTVDATPSEDDD 514
Query: 779 ----PMLFYVTQGQE--EIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
P+++Y TQG E E A T S N E + V++ + IGVI+P
Sbjct: 515 DTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVPGNSIGVISP 574
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q + L + + + L +IE+++VD FQGREKD+II+S VRSN+ +GFL +
Sbjct: 575 YNAQVSHLKKLIHDELKL-----TDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKE 629
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSK 915
RRLNVA+TR + ++V+GN +VL +
Sbjct: 630 ERRLNVAMTRPRRQLVVVGNIEVLQR 655
>gi|255566048|ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2, putative [Ricinus communis]
Length = 989
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 227/442 (51%), Gaps = 42/442 (9%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
+RPL +IQGPPGTGK+ ++ + V Q G VLV AP+N AVD + EK+ GL +VR
Sbjct: 530 KRPLLIIQGPPGTGKSGLLKELIVRAVHQ-GERVLVTAPTNAAVDNMVEKLSNIGLDIVR 588
Query: 578 VCAKSREAIDSPVSFLALHNQIRN------MEM---NSELKKLLQLKEETGELSSADEKR 628
V +R I S V+ +L + + ME S+L+K L+ E L++ +
Sbjct: 589 VGNPAR--ISSAVASKSLSEIVNSKLATFRMEFERKKSDLRKDLRHCLEDDSLAAGIRQL 646
Query: 629 YRMLKKN-------AEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPEC 680
+ L K + K +L +A V+ T GA DP + ++ F ++IDE+ QA EP C
Sbjct: 647 LKQLGKTMKKKEKESVKEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSC 706
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRM 738
+P++ G K+ IL GD CQL PV++ +KA GL SL ER L G+ +L QYRM
Sbjct: 707 WIPILQG-KRCILAGDQCQLAPVILSRKALEGGLGVSLLERAATLHDGVLALQLTTQYRM 765
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP--VPDKPMLFYVTQ--------GQ 788
+ ++ + S Y G L++ L F P + P+L T+ G
Sbjct: 766 NDAIASWASKEMYGGLLKSSSKVASHLLVHSPFVKPTWITQCPLLLLDTRMPYGSLFIGC 825
Query: 789 EE---IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
EE AG+G S+ N EA V + I G++P I V +PY Q L +
Sbjct: 826 EEHLDPAGTG-SFYNEGEAEIVVQHVISLIYAGVRPTTIAVQSPYVAQVQLLRDRLD--- 881
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
LP +EVA++D+FQGRE D +I+S VRSN+ +GFL D RR+NVA+TRA+ +
Sbjct: 882 ELPEA--DGVEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARRHVA 939
Query: 906 VIGNPKVLSKQPLWNNLLNFYK 927
V+ + + LL +
Sbjct: 940 VVCDSSTICHNTFLARLLRHIR 961
>gi|326800123|ref|YP_004317942.1| ATPase AAA [Sphingobacterium sp. 21]
gi|326550887|gb|ADZ79272.1| AAA ATPase [Sphingobacterium sp. 21]
Length = 630
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 264/528 (50%), Gaps = 72/528 (13%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+D ++ S+ +MQ AL ++ S ++L V F P +L
Sbjct: 122 LGIDLLFDEYSYKQMQNAL----LEASKSSKNPLIQVLTGERQPVFFSSATP-----ISL 172
Query: 503 PDLNRSQVYAV-KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
LN +Q A+ K +++I GPPGTGKT T L+K+ +LV APSN AV
Sbjct: 173 DRLNANQQLAIEKIRSANDIAIIHGPPGTGKTTTIIEACKVLLKERNCQLLVVAPSNTAV 232
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
D LT+++ + + V R+ + SR + + L QI E+KK+ + + E+
Sbjct: 233 DLLTDQLLKAQINVTRIGSPSR--VTPELLHATLDEQISQTSSIKEVKKIRKRANQFREM 290
Query: 622 SSADEKRYR--------------------------MLKKNAEKSLLDNADVICCTCVGAG 655
+ +RY+ L++ A +S++ NA VI T VGAG
Sbjct: 291 A----RRYKRNFGKEERIQRQTLFAEAAKLIKEADALEQYATESVIKNAQVITATLVGAG 346
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
+ I F +++IDE+ QA EP C +P IL AK+LIL GDH QL P + AA GL
Sbjct: 347 HYSIKNICFEAVIIDEAAQALEPACWIP-ILKAKKLILAGDHQQLPPTIKSVSAANQGLK 405
Query: 716 QSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
++L E+ + L + L+ QYRMH + F S FY+ SL A + + FP
Sbjct: 406 ETLLEKCIHLYPQSGVMLQEQYRMHTSIMSFSSQKFYQSSL----IAHNSVANTLLFP-- 459
Query: 775 VPDKPMLFYVTQG--QEEIAGSGTSYVNRTEASNVE---KITTRFIRCGMKPE---QIGV 826
D+P+ F T G +E G+ Y N EAS V + + + PE +I +
Sbjct: 460 -NDQPLQFIDTVGCGFDERDDEGSIY-NLEEASFVLHYLSMLSTSLSQHYSPENYPRIAI 517
Query: 827 ITPYEGQ----RAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDH 881
I+PY Q +A L + P IY++ + + ++D FQG+E+D++I+S RSN
Sbjct: 518 ISPYASQVDKFKALL-------EADPLSIYKDKVTINTIDGFQGQERDIVIISLTRSNQE 570
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+ IGFL+D RR+NVA+TRAK ++++G+ LSK P + +L+ + +++
Sbjct: 571 RKIGFLSDIRRMNVAMTRAKKKLVMVGDSLTLSKLPFYADLITYSEKE 618
>gi|296823782|ref|XP_002850498.1| helicase SEN1 [Arthroderma otae CBS 113480]
gi|238838052|gb|EEQ27714.1| helicase SEN1 [Arthroderma otae CBS 113480]
Length = 1528
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 252/529 (47%), Gaps = 107/529 (20%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------------KQTGSP 550
DLN +Q AVK A+ +LIQGPPG+GKT T IV L+ K T P
Sbjct: 647 DLNPAQSKAVKSAVDNDAFTLIQGPPGSGKTKTIVAIVGALLTPILAERRISQPKPTSDP 706
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGLKVVR--------VCAKSREAIDSPV- 590
+LVCAPSN AVD+L + + G+K + + +AI++ V
Sbjct: 707 AQMSKSTPSKKLLVCAPSNAAVDELVMRF-KEGIKTISGKIQPISVIRLGRSDAINTNVL 765
Query: 591 ---------------------------SFLALHNQI----------------RNMEMNSE 607
S+ H + R +++E
Sbjct: 766 DVTLDELVNAKLNQTGQKKNGEERDLQSYFTEHKETSTKFTEIRQRIDQCRARGEPVSTE 825
Query: 608 LKKLLQL-KEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A D R + + ++ ++ ++D A VIC T G+G
Sbjct: 826 LEREFDLLKRKKAQLSQAIDNARDKNHSAARNAELTRRRIQQEIIDGAHVICSTLSGSGH 885
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K+A+R
Sbjct: 886 EMFQSLSIEFETVIIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKEASRFQY 945
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
QSLF R+ L+ QYRMHPE+SKFPS FY+G LQ+G + PW
Sbjct: 946 EQSLFVRMQANHPNDVHLLDTQYRMHPEISKFPSQAFYDGKLQDGPGMGPLRKK----PW 1001
Query: 774 PVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVIT 828
+ P F+ QG A G S VN E + ++ R + + +IG+IT
Sbjct: 1002 HGSELLGPYRFFDVQGMHSNAAKGHSLVNIAELTVAMRLYDRLLADYKNYDFTGKIGIIT 1061
Query: 829 PYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
PY+GQ L +Y GS I+ +E + DAFQGRE ++II SCVR++ +GIGF
Sbjct: 1062 PYKGQLRELKARFAAKYGGS----IFTAVEFNTTDAFQGRECEIIIFSCVRASS-RGIGF 1116
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
L+D RR+NV LTRAK + V+GN + L + W L++ + + + EG
Sbjct: 1117 LSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWRALIHDAQGRDLYTEG 1165
>gi|154492784|ref|ZP_02032410.1| hypothetical protein PARMER_02423 [Parabacteroides merdae ATCC
43184]
gi|154087089|gb|EDN86134.1| putative DNA helicase [Parabacteroides merdae ATCC 43184]
Length = 640
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 253/518 (48%), Gaps = 43/518 (8%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
+ + TS+ M AL + AY+ LLG V R P F P
Sbjct: 137 IQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKT--PVGRRTFFPMRF-----PW 189
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV H + + +S++ GPPGTGKT T +Y+ + + V+VCA SN AVD
Sbjct: 190 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCAQSNTAVDW 248
Query: 564 LTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLALHNQIRNMEMNSELK 609
++EK+ G+ V+R+ +R E+ + IR E+ S L+
Sbjct: 249 ISEKLVDRGIHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIR--EIQSNLR 306
Query: 610 KLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSI 667
K ++ET + R+R L+ + L D A V+ CT VG+ + L F ++
Sbjct: 307 KKSHGEKETAR-NRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTL 365
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
IDE+ QA E C + I A ++IL GDH QL P + C +AAR GL +L +++
Sbjct: 366 FIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRKP 424
Query: 728 RPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ 786
L + QYRM+ ++ +FPS +FY LQ+ R + + D P D +
Sbjct: 425 ETVSLLKTQYRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHF--- 481
Query: 787 GQEEIAGSGTSYVNRTEASNVEKITTRFI------RCGMKPEQIGVITPYEGQRAFLVQH 840
+E+ S +NR EA+ + ++I R + G+I+PY+ Q + ++
Sbjct: 482 -EEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQY-IRG 539
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
+ + + + I +VD FQG+E+D+I++S VR+ND IGFL D RR+NVA+TRA
Sbjct: 540 LIKRDTFFKPFRRLITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRA 599
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKE--QKVLVEGP 936
+ ++++G+ L++ + L + E Q + V+ P
Sbjct: 600 RMKLMILGDAPTLTRHAFYKELYEYIWENGQVITVQPP 637
>gi|357044126|ref|ZP_09105810.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
gi|355367676|gb|EHG15104.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
Length = 632
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 243/457 (53%), Gaps = 52/457 (11%)
Query: 497 FSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+ LP LN +Q AV + + ++++ GPPGTGKT T + + + + S V+VCA
Sbjct: 183 FAPIRLPWLNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINEALMRE-SQVMVCA 241
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD + EK+ G+ V+R+ +R D + F R E + + +L ++
Sbjct: 242 QSNMAVDWICEKLVDRGINVLRIGNPTR-VNDKMLGF----TYERKFEAHPDYPQLWSIR 296
Query: 616 EETGEL-------SSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLK 661
+ EL S + ++ LK A + L D A V+ T VGA +
Sbjct: 297 KAIRELRNNRKRGSESYHQKMDRLKSRATELEIRINTELFDEARVVASTLVGANSRVMEG 356
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
KF ++ IDE+ QA E C + I A ++I GDHCQL P V A R GL ++L ER
Sbjct: 357 QKFTTLFIDEAAQALEAACWI-AIRRASRVIFAGDHCQLPPTVKSIAALRGGLGKTLMER 415
Query: 722 LV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI-DFPWPV 775
+V V+ + L+VQYRM+ E+ +F S++FY G + V A + K I D+
Sbjct: 416 IVENKPEVVTL----LKVQYRMNEEIMRFSSDWFYHGQI---VSAPQIKYRGILDY---- 464
Query: 776 PDKPMLFYVTQ---GQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---PEQI--GV 826
D PM++ T +E+ G +N+ EA ++ + F++ G + E+I GV
Sbjct: 465 -DNPMVWIDTSDELSKEQFVGESFGRINKGEAELTLKTLQEYFMKIGKQRILDERIDVGV 523
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
I+PY Q +L ++ + K Y+ I V +VD FQG+E+D+I++S VRSN+ IG
Sbjct: 524 ISPYRAQVQYLRSLIKKREFF--KPYRSLISVNTVDGFQGQERDVILISLVRSNEEGQIG 581
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FLND RR+NVA+TRA+ +I++GN L++ P + L
Sbjct: 582 FLNDLRRMNVAITRARMKLIILGNVATLTRHPFYKKL 618
>gi|423723542|ref|ZP_17697691.1| hypothetical protein HMPREF1078_01678 [Parabacteroides merdae
CL09T00C40]
gi|409241252|gb|EKN34022.1| hypothetical protein HMPREF1078_01678 [Parabacteroides merdae
CL09T00C40]
Length = 639
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 253/518 (48%), Gaps = 43/518 (8%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
+ + TS+ M AL + AY+ LLG V R P F P
Sbjct: 136 IQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKT--PVGRRTFFPMRF-----PW 188
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV H + + +S++ GPPGTGKT T +Y+ + + V+VCA SN AVD
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCAQSNTAVDW 247
Query: 564 LTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLALHNQIRNMEMNSELK 609
++EK+ G+ V+R+ +R E+ + IR E+ S L+
Sbjct: 248 ISEKLVDRGIHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIR--EIQSNLR 305
Query: 610 KLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSI 667
K ++ET + R+R L+ + L D A V+ CT VG+ + L F ++
Sbjct: 306 KKSHGEKETAR-NRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTL 364
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
IDE+ QA E C + I A ++IL GDH QL P + C +AAR GL +L +++
Sbjct: 365 FIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRKP 423
Query: 728 RPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ 786
L + QYRM+ ++ +FPS +FY LQ+ R + + D P D +
Sbjct: 424 ETVSLLKTQYRMNEDIMRFPSRWFYHDELQSAPEVKHRGILEFDTPVVWLDTADCHF--- 480
Query: 787 GQEEIAGSGTSYVNRTEASNVEKITTRFI------RCGMKPEQIGVITPYEGQRAFLVQH 840
+E+ S +NR EA+ + ++I R + G+I+PY+ Q + ++
Sbjct: 481 -EEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQY-IRG 538
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
+ + + + I +VD FQG+E+D+I++S VR+ND IGFL D RR+NVA+TRA
Sbjct: 539 LIKRDTFFKPFRRLITAHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITRA 598
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKE--QKVLVEGP 936
+ ++++G+ L++ + L + E Q + V+ P
Sbjct: 599 RMKLMILGDAPTLTRHAFYKELYEYIWENGQVITVQPP 636
>gi|327355296|gb|EGE84153.1| tRNA-splicing endonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 2179
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 262/545 (48%), Gaps = 114/545 (20%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------YQLVKQTGSPV-- 551
++N +Q AV+ A+ +LIQGPPG+GKT T +V Q + + GS V
Sbjct: 1291 NVNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPGSSVNL 1350
Query: 552 ------------LVCAPSNIAVDQL---------TEKIHRTGLKVVRVCAKSREAIDSPV 590
LVCAPSN AVD+L T + + VVR+ +AI+S V
Sbjct: 1351 KPATRTTNSKKLLVCAPSNAAVDELVMRFKEGVVTSSGQKQNISVVRLGRS--DAINSNV 1408
Query: 591 ---------------------------SFLALH-------NQIRN---------MEMNSE 607
++ + H N++R+ + SE
Sbjct: 1409 IDVTLDELVNAKLGQNGRKNGNEKDLQTYYSEHKEACTQFNEVRDRLDQCRAKGQGVPSE 1468
Query: 608 LKKLLQL-KEETGELSSADE----------KRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
L++ L K + +LS A + + + +K ++ ++D A VIC T G+G
Sbjct: 1469 LEREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIIDGAHVICATLSGSGH 1528
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L I+F +++IDE+ Q+ E ++P+ G + +LVGD QL P V+ K A+R
Sbjct: 1529 EMFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCVLVGDPKQLPPTVLSKVASRFQY 1588
Query: 715 SQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
QSLF R+ + L+ QYRMHPE+S+FPS FY+G LQ+G + ++ PW
Sbjct: 1589 EQSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPGMAKLRVR----PW 1644
Query: 774 PVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVIT 828
+ P F+ QG A G S VN E K+ R I R +IG+IT
Sbjct: 1645 HKSELLGPYRFFDVQGLHSSAPKGHSLVNVAELRVAMKLYERLITDYRTYDFTGRIGIIT 1704
Query: 829 PYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
PY+GQ ++ M Q+ I+ ++E + DAFQGRE ++II SCVR+++ +GIGF
Sbjct: 1705 PYKGQ----LREMKNQFANKYGNSIFTKVEFNTTDAFQGRECEVIIFSCVRASN-RGIGF 1759
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
L D RR+NV LTRAK + V+GN + L + WN L+ + + + +G + L L
Sbjct: 1760 LADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQG------DVLHL 1813
Query: 947 FSKPK 951
KP+
Sbjct: 1814 LQKPQ 1818
>gi|149193893|ref|ZP_01870991.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
gi|149135846|gb|EDM24324.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
Length = 641
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 160/494 (32%), Positives = 244/494 (49%), Gaps = 98/494 (19%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQ A+ ++I LI GPPGTGKT T A ++ K G +LVCA SN+AVD +
Sbjct: 171 LNDSQNKALSYSINSETFLIHGPPGTGKTTTLAEVIK---KHIGKKILVCADSNVAVDNV 227
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSA 624
EK+ + VVR+ ++ I+S + +L +IR + E++KL++ + +L
Sbjct: 228 LEKL--SEYNVVRIGHPAK--IESNLMKYSLDVKIRRDKRYKEVEKLIK---KIDDLKYL 280
Query: 625 DEKRYRM-------------------------------LKKNAE---------------- 637
EKR + +K+ AE
Sbjct: 281 QEKRTKKPTPSRRRGMSDEEILDLAKQGKGKRGVKVEWIKEMAEWLKIQRKISKLYDEKN 340
Query: 638 -------KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
K +L++AD++ T GAG L + KF + +DE+ Q+ EP ++P+I AKQ
Sbjct: 341 KITEEIMKEILNSADIVFATNSGAGSEFLEERKFDVVFLDEAAQSMEPSTLIPLI-KAKQ 399
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERL-VVLGIRPFRLEVQYRMHPELSKFPSNF 749
I GD QL P ++ L S+FER + I LEVQYRM+ +++ FPS
Sbjct: 400 SIFAGDDKQLPPTILSNDER---LKVSMFERFHKIYPIASHTLEVQYRMNEKINNFPSCE 456
Query: 750 FYEGSLQN------------GVCADERKLSKIDFPWPVPDKPMLFYVTQGQ--EEIAGSG 795
FYE ++ GV DE F P ++F+ T+G+ EE
Sbjct: 457 FYECKVKTYEKIKNITLKDLGVNEDE------SFGGYTP---IVFFDTRGKFLEETKKDS 507
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
S N EA V + + I K E IGVITPY+ ++ + M+ + + I
Sbjct: 508 PSKYNPKEAEFVLSLCKKLIENNAKQEFIGVITPYKDHEEYIKKLMENEK------IEGI 561
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
E+ SVD FQGREK++II+S VR+N+ + IGFL+D RRLNVA+TR K +I++G+ K LS
Sbjct: 562 EIKSVDGFQGREKEIIIVSLVRANEKENIGFLDDIRRLNVAITRPKRKLIIVGDAKTLST 621
Query: 916 QPLWNNLLNFYKEQ 929
+ +L+++ K++
Sbjct: 622 NQTYQHLIDYVKKE 635
>gi|395829539|ref|XP_003787913.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal proliferator-activated
receptor A-interacting complex 285 kDa protein-like
[Otolemur garnettii]
Length = 2953
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 253/501 (50%), Gaps = 77/501 (15%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ-------TGSP------- 550
LN SQ AV+ A+++P ++IQGPPGTGKTV I+Y K +G+P
Sbjct: 2457 LNPSQNGAVREALEKPFTVIQGPPGTGKTVVGLHIIYWFHKSNQEERQPSGTPGGENGPR 2516
Query: 551 ---VLVCAPSNIAVDQLTEKI-HRTGLKVVRVCAKSREAIDSPVS--------------- 591
+L C PSN +VD L + R LK +RV + EA + PV
Sbjct: 2517 DPCILYCGPSNKSVDVLAGLLLRRAELKPLRVYGEQAEASEFPVPGVGNNGLLKKTPRDG 2576
Query: 592 -------FLALHNQIRNME--MNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLD 642
+ LH++IR +E+K ++ E SS D YR + A K L+
Sbjct: 2577 RPNPALRSITLHHRIRQASNPHATEIKAFDARVQKGEEFSSEDLLLYRTILGKARKFELE 2636
Query: 643 NADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI--LGAKQLILVGDHCQL 700
VI CTC A P L K+ +L+DE+ ATEPE ++P++ A++++L+GDH QL
Sbjct: 2637 RHIVILCTCSCAASPSLRKLDVRQVLVDEAGMATEPETLIPLVHFPQAEKVVLLGDHKQL 2696
Query: 701 GPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
PVV ++ R GL QSLFER + L+ QYRMH + FPS FY+G L+ G
Sbjct: 2697 RPVVKNEQLQRLGLDQSLFER---YHGDAYMLDTQYRMHEGICAFPSMEFYKGKLKTG-- 2751
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT-----TRFI 815
A R+ S I P++F QGQE+ T N + +N++++ + +
Sbjct: 2752 AGLRRPSSILGHANKESCPVIFGYMQGQEQSLLVSTDEGNESSKANLKEVAVVVHIAKQL 2811
Query: 816 RCG--MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
G ++P+ I ++TPY Q + + + + +G + V+S+ QG E +++
Sbjct: 2812 TLGRTVEPKDIAILTPYNAQASEIRKGLLKEG------VTGVTVSSITKSQGSEWRYVLV 2865
Query: 874 SCVRSN-----DHQG--------IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
S VR+ D Q +GF+ DP ++NVA+TRA+ G+ +IG+ +L PLW
Sbjct: 2866 STVRTCAQSDLDQQPTKGWLRKFLGFVVDPNQVNVAITRAQEGLCLIGDHLLLRCCPLWK 2925
Query: 921 NLLNFYKEQKVLVEGPLNNLK 941
+LL+F + Q+ LV P N+++
Sbjct: 2926 HLLDFCEAQQSLV--PANHVQ 2944
Score = 79.7 bits (195), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 130/533 (24%), Positives = 204/533 (38%), Gaps = 89/533 (16%)
Query: 425 VGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV 484
LEL+S EA+ V F DR+ F + Q+V A RL+ ++
Sbjct: 704 AALELRS------EASPILEVQF-----QIDRL-----TFCLWHQAVDALPEERLVVPDL 747
Query: 485 DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR--------PLSLIQGPPGTGKTVTS 536
C LP+ AP+ N Q A+ R P LI GP GTGKT T
Sbjct: 748 PS----CVLPRPLPAPSSVRGNCKQKLAMALIAGRGPVDGRPVPPLLIYGPFGTGKTYTL 803
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVD-QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLAL 595
A ++++Q + VL+C +N A D + E H S A +P+ +
Sbjct: 804 AMASLEVIRQPYTKVLICTHTNSAADIYVREYFHNF--------VSSGHAEAAPLRVMYT 855
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG 655
+ + L S D + +R +AE L V+ T A
Sbjct: 856 DRPPSQTDATTLRYCCL----------SVDHRAFRP-PTDAE---LVQHRVVVSTTSQAR 901
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILG--AKQLILVGDHCQLGPVVMCKKAARAG 713
+ R+ F ILIDE+ Q E E + P+ + +++L GDH Q+ P + A++
Sbjct: 902 ELRVPSGFFSHILIDEAAQMLECEALTPLAYASPSTRVVLAGDHMQVTPRLFSVARAQSA 961
Query: 714 LSQSLFERLVVLGIRPFRLEVQ--------YRMHPELSKFPSNFFYEGSLQNGVCADERK 765
L+ + L Q YR + F S FY L G+CA
Sbjct: 962 EHTLLYRLFLHYQQETHELAKQSRVIFHENYRSTQAIVSFVSRHFY---LAKGICASG-- 1016
Query: 766 LSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE----ASNVEKITTRFIRCGMKP 821
P P+ F G+ E S TS++N E V+++ + C
Sbjct: 1017 ----SVPRHPRHYPLSFCHVVGRPERDLSMTSWLNLAEIIQVVEKVQEVWDTWPCCWGSR 1072
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
EQ + G + ++ + SL E+ V S + GRE ++++S V ++D
Sbjct: 1073 EQRYICAVSHGAQVSALRQELRRRSL-----GEVSVGSFEILPGREFRVVVLSTVHNSDT 1127
Query: 882 -QGIG-----FLNDPRRLNVALTRAKYGIIVIGNPKVLSK----QPLWNNLLN 924
G G F D R LN +TRA+ ++ +G+ L LW + +
Sbjct: 1128 LLGPGAPAAEFFTDARVLNTVMTRAQSQLVAVGDAVALCSFGTCSKLWKSFIR 1180
>gi|294659099|ref|XP_461444.2| DEHA2F25388p [Debaryomyces hansenii CBS767]
gi|202953617|emb|CAG89859.2| DEHA2F25388p [Debaryomyces hansenii CBS767]
Length = 755
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 260/558 (46%), Gaps = 105/558 (18%)
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN--VDEVLFRCHLPKHFSAPNLPDLNRS 508
S ++ RM A+ K + S + I LLG + + R KHF PNL N S
Sbjct: 181 SITYKRMTTAMNKLSELTSSNKSEIIQYLLGESQYAKKSSGRSLKQKHFFNPNL---NTS 237
Query: 509 QVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
Q A+ AI + +++I GPPGTGKT T ++ QL VLVC PSNI+VD + E+
Sbjct: 238 QKEAINFAINESAITIIHGPPGTGKTYTLIELIKQLTFNNDEKVLVCGPSNISVDTILER 297
Query: 568 ---------IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE--LKKLLQLKE 616
+H K R KS A +P + + + R + N + L L +
Sbjct: 298 LSPIFNEEEVHTDKKKSRRAVKKSTSAGKNPEELIRIGHPARLLGSNLQHSLDILSKTNY 357
Query: 617 ETGELSSAD-----------------------------------EKRYRMLKKNAEKSLL 641
+TG + + +K R+ ++ + LL
Sbjct: 358 DTGSNDNKEILKDIEKDISDTLGKVKKCRNYAERRALWSDLKTYKKELRVRERKIVQDLL 417
Query: 642 DNADVICCTCVGAGDPRLLKIK-------------FHSILIDESMQATEPECMVPVI--L 686
A V+ T GAG L + F +I+IDE Q+ EP+C +P++ L
Sbjct: 418 VGAKVVLSTLHGAGSYELTSLYKEPTLNFDHDHPLFDTIIIDEVSQSLEPQCWIPLVNHL 477
Query: 687 GAKQLILVGDHCQLGPVVMCK------------KAARAGLSQSLFERLVV-LGIRPFR-- 731
G K+L++ GD+ QL P V K K A L +LF+RL+ F+
Sbjct: 478 GCKRLVIAGDNMQLPPTVKSKDDLDALMRKLNIKDGVADLELTLFDRLIRDHNGSQFKKL 537
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW--PVPDK--PMLFYVTQG 787
L+ QYRM+ ++ +FPSN Y+G+L+ R L+ D P P D P ++Y TQG
Sbjct: 538 LDTQYRMNEDIMRFPSNELYDGNLKAHDSV--RSLTLEDLPSVKPTDDTSIPCVWYDTQG 595
Query: 788 -----------QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+A S S N E VE+ ++ G+ P IGVI+PY Q +
Sbjct: 596 GNFPERASDDDSRAMAESTGSKYNDMEVLVVEQHLQNLLQAGITPADIGVISPYNAQASL 655
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
L + +Q ++ IEV++VD FQGREK+ II+S VRSN ++ IGFL D RRLNVA
Sbjct: 656 LKKTLQ------SRQIDGIEVSTVDGFQGREKEAIIISLVRSNPNREIGFLADRRRLNVA 709
Query: 897 LTRAKYGIIVIGNPKVLS 914
+TR K + +IG+ ++++
Sbjct: 710 MTRPKKHLCIIGDLELMA 727
>gi|313674250|ref|YP_004052246.1| DNA helicase [Marivirga tractuosa DSM 4126]
gi|312940948|gb|ADR20138.1| DNA helicase [Marivirga tractuosa DSM 4126]
Length = 655
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 235/486 (48%), Gaps = 81/486 (16%)
Query: 504 DLNRSQVYAVKHA-IQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN Q + A + + LI GPPGTGKT T + ++ L + G VLV APSN AVD
Sbjct: 179 NLNSKQQEIINQALVTNDIFLIHGPPGTGKTTTLSYLIKSLF-EGGKKVLVTAPSNTAVD 237
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN----MEMNSELKKLLQLKEET 618
+ EK+ + R+ R +D + L+L Q+++ + N + LK+E
Sbjct: 238 NILEKLQNLEIPSTRIGNPIR--MDENLLNLSLDVQLQDHPDYQQANGIWNAIQVLKKEQ 295
Query: 619 GELSSADEKRYRMLKKN------------------------------------------- 635
E A + R L N
Sbjct: 296 NEYIPASGQNRRGLSDNKIIQLASSKKPYRGIQSAKLRKMAKWIKIQQQINKNYEQAQAL 355
Query: 636 ---AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLI 692
A +S+L+ + VIC T AG L I F + IDE+ Q+TEPE ++P++ G K +
Sbjct: 356 QLSAIESILEQSPVICATNSSAGSELLKDIIFDVVCIDEATQSTEPEALIPLVKGRK-WV 414
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLV--VLGIRPFRLEVQYRMHPELSKFPSNFF 750
L GDH QL P V +A+ LS SLFER + R L +QYRMH E+ +F + F
Sbjct: 415 LAGDHQQLPPTVKSSEAS--DLSISLFERFQKELPANRSNILTIQYRMHQEIMRFSNENF 472
Query: 751 YEGSLQNGVCADERKLSKID----FPWPVP-------DKPMLFYV--TQGQEEIAGSGTS 797
Y+ L+ + L+ + FP+ P P + +V QG EE S
Sbjct: 473 YQKKLKAHPSVAKHSLADLPGFDPFPYVNPALEKVVQSSPAVVFVPCEQGVEEQLADSHS 532
Query: 798 YVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
+ N+ E + ++IT + + PE IG+I+PY+ Q + L + K Y +E+
Sbjct: 533 WFNKAEIALTKEITDALLSSRLFPEDIGIISPYDQQVSRLKSDL--------KDYH-VEI 583
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
S+D FQGREK++II+S VRSN + IGFL D RRLNVALTRAK +I+IG+P L P
Sbjct: 584 KSIDGFQGREKEVIIISLVRSNLKEDIGFLRDYRRLNVALTRAKRKLIIIGSPFTLQSNP 643
Query: 918 LWNNLL 923
++ +L+
Sbjct: 644 IYKSLI 649
>gi|27764657|gb|AAO23082.1| putative component of a tRNA splicing complex [Oryza sativa
Japonica Group]
Length = 788
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 210/406 (51%), Gaps = 48/406 (11%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ H+ ++
Sbjct: 341 VLVCAPSNSALDEIVLRVLQTGIRDENNNTYNPKIVRIGLKA-------------HHSVK 387
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
+ M+ L+Q K + SS +R S+LD A ++ T +G
Sbjct: 388 AVSMD----YLIQQKLSGVDRSSDGGRRGAGEYDRIRSSILDEAAIVFSTLSFSGSSIFS 443
Query: 661 KIK--FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
++ F ++IDE+ QA EP ++P+I G KQ+ LVGD QL V+ A + G SL
Sbjct: 444 RMARAFDVVIIDEAAQAVEPATLIPLIHGCKQVFLVGDPVQLPATVISSTAQKLGYGTSL 503
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
F+R G L++QYRMHPE+S FPS FYEG L++G +++ PW
Sbjct: 504 FKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGVLEDGEGLSKKR------PWHSYSC 557
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PE-----QIGVITPY 830
P F+ G E S+VN E VE IT + + M+ PE Q+ VI+PY
Sbjct: 558 FGPFCFFDVDGTESQPSGSGSWVNEDE---VEFITLLYHQMAMRYPELKSSSQVAVISPY 614
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L H ++ + + + I+V +VD FQG EK+++I SCVR N Q IGF++D
Sbjct: 615 RHQVKLLKDH--FRSTFGDQSKEVIDVNTVDGFQGCEKEVVIFSCVRCNKEQKIGFVSDF 672
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
RR+NVA+TRA+ ++V+G+ L + WNNL+ KE+ + P
Sbjct: 673 RRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVP 718
>gi|383458482|ref|YP_005372471.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
gi|380730970|gb|AFE06972.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
Length = 653
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 242/513 (47%), Gaps = 47/513 (9%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 502
+D + +++R++ L++ D+ + LLG+ R K F+ P
Sbjct: 137 LRLDVVPNDVTYERVRAGLQRVKAMDKGQERHKREVLLGNEPP----RFDNTKDFT-PTR 191
Query: 503 PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
P Q A++ L+ GPPGTGK+ A + Q V + G +L A SN AVD
Sbjct: 192 PLNPEQQDAAMRALAAEDFFLVHGPPGTGKSTVLAEVAAQAVAR-GERLLCTAASNAAVD 250
Query: 563 QLTEKIHRTGLKVVRVCAKSREAI---------------DSPVS-------FLALHNQIR 600
L E GL+ +RV +R A D VS F R
Sbjct: 251 HLLELCLEQGLRAIRVGHPARVAARLQEHTLDIVVEEHPDRVVSRDLFDEAFDLFGYARR 310
Query: 601 NMEMNSELKKLLQLKEETGELSS-ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
++ + T E DE R L+K A K++L ADV+C T G L
Sbjct: 311 QRSQGRSRERFSNARSSTAEAKDLMDEARK--LEKKAVKAVLARADVVCVTLASLGSGVL 368
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+F L+DE+ QATEP ++ L A +++L GD QL P V+ ++AA+AGL SLF
Sbjct: 369 AGEEFDRALLDEATQATEPLALLG-FLRAPKVVLAGDPQQLPPTVLSQEAAKAGLGTSLF 427
Query: 720 ERLVV-LGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI---DFPWP 774
ERL+ G R L QYRM+ + FPS Y G L+ +R LS +
Sbjct: 428 ERLLQDHGDEVKRMLREQYRMNAAIMAFPSKEMYGGELRAHPSVADRTLSSVLDSGSGAE 487
Query: 775 VPDKPMLFYVTQGQ---EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
V P+L+ T G+ EE+ + S +N EA+ V + + G+ P ++ VI PY
Sbjct: 488 VDAPPVLYLDTAGKGFDEEVEPTTHSLLNPGEATYVIARVRQLLSLGLAPREVAVIAPYS 547
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
Q L + ++ ++ E+EV +VDAFQGREKD I++S RSN +GFLND R
Sbjct: 548 AQARHLREALE-------AVHPEVEVDTVDAFQGREKDAILVSMTRSNSEGQLGFLNDLR 600
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
R+NVALTRA+ + V+G+ LS P + +
Sbjct: 601 RMNVALTRARRHLFVVGDSATLSSHPFYARFIE 633
>gi|383116067|ref|ZP_09936820.1| hypothetical protein BSHG_3112 [Bacteroides sp. 3_2_5]
gi|251945242|gb|EES85680.1| hypothetical protein BSHG_3112 [Bacteroides sp. 3_2_5]
Length = 634
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 230/451 (50%), Gaps = 36/451 (7%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFIGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
L ++ S +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NVA
Sbjct: 539 LRGKLK-GCSFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVA 597
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+TRA+ ++++G+ +SK + L+ + +
Sbjct: 598 ITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|53715040|ref|YP_101032.1| helicase [Bacteroides fragilis YCH46]
gi|52217905|dbj|BAD50498.1| putative helicase [Bacteroides fragilis YCH46]
Length = 634
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 230/451 (50%), Gaps = 36/451 (7%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFIGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
L ++ S +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NVA
Sbjct: 539 LRGKLK-GCSFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNVA 597
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+TRA+ ++++G+ +SK + L+ + +
Sbjct: 598 ITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|400600684|gb|EJP68352.1| helicase sen1 [Beauveria bassiana ARSEF 2860]
Length = 3005
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 255/544 (46%), Gaps = 110/544 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQ-------TGSPV----- 551
LNR Q +V A + +LIQGPPGTGKT T +V L+ G+PV
Sbjct: 1306 LNRGQALSVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSSQLAQAPAKGTPVGVPIR 1365
Query: 552 ---------------LVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDS 588
LVCAPSN AVD+L ++ + G+K + V R +AI++
Sbjct: 1366 PGSTNQPTGQRPKKLLVCAPSNAAVDELVTRM-KNGIKTTSGKMKHINVLRLGRSDAINA 1424
Query: 589 PVSFLALHNQIR-NMEMNSELKKL-----------LQLKEETG----ELSSADEKR---Y 629
V + L +R ME +S K+ Q+KEE G +L A+EK Y
Sbjct: 1425 AVKDVTLDELVRARMEGDSTKDKVKATKDKLHERASQIKEELGILRPKLDEANEKEDQDY 1484
Query: 630 R------------------------------------MLKKNAEKSLLDNADVICCTCVG 653
R M ++ ++ +L+NA V+C T G
Sbjct: 1485 RNKLLRQFDELKREQRDIGKQIEADKDSGNSVAREVEMKRRQIQQEILNNAHVLCATLSG 1544
Query: 654 AGDP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
+G R L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR
Sbjct: 1545 SGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAAR 1604
Query: 712 AGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
G QSLF R+ L ++QYRMHPE+S FPS FYEG L++G D L +
Sbjct: 1605 FGYDQSLFVRMQQNHPNSVHLLDMQYRMHPEISMFPSKEFYEGQLRDG--QDMAGLRQQP 1662
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR----CGMKPEQIGV 826
+ P F+ QG +E G S VN E ++ RF + C + +IG+
Sbjct: 1663 WHRSALLGPYRFFDVQGVQERGRRGQSLVNTRELDVALQMYDRFRKDYSDCNLV-GKIGI 1721
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPY+ Q +++ I IE + DAFQGRE ++II SCVR++ GIGF
Sbjct: 1722 ITPYKAQ--LFELRNRFRARYGEDITDIIEFNTTDAFQGRECEIIIFSCVRASATGGIGF 1779
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
+ D RR+NV LTRAK + ++G+ + L + W L+ + + +G + + +
Sbjct: 1780 MTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAQSRDRYTQGDI------VSI 1833
Query: 947 FSKP 950
F KP
Sbjct: 1834 FRKP 1837
>gi|183233537|ref|XP_654409.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169801534|gb|EAL49041.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 979
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 191/340 (56%), Gaps = 19/340 (5%)
Query: 590 VSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRY-RMLKKNAEKSLLDNADVIC 648
+ + A N ++ + NSE++K++ + + + +E RY +L + +C
Sbjct: 576 IKYGAFENFVK--QTNSEIQKII---DRVSQRITLEENRYINNFTSTHFDDILSGIECVC 630
Query: 649 CTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKK 708
T +LK KF + ++DE+ Q+ EPE + +I ++ +L+GD QL P + +
Sbjct: 631 STLTICTRSIMLKQKFFASIVDEAAQSLEPETLAGII-NVRKTVLIGDIQQLQPTCLSTE 689
Query: 709 AARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
A AG +S+FER + I+ L+ QYRMHP +S+F + FY L+NGV +D+R
Sbjct: 690 AREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVSSDDRFDD 749
Query: 768 KIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVI 827
+I +P P++F G E SGTSY N E ++++ + + ++ +IG+I
Sbjct: 750 RIINFFPDYTNPIMFINCDGTEHYGSSGTSYNNAGEVQIIQEVVEKLLNNDIEENEIGII 809
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+PY+ Q+ + Q++ +I+VA++D FQG EK+ II SCVRSN G+GF+
Sbjct: 810 SPYQAQQELISQYVS----------TKIKVANIDGFQGNEKEYIIFSCVRSNQTLGVGFV 859
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN-FY 926
ND +RLNVALTRAK G+I+IGN L +WN L++ FY
Sbjct: 860 NDYKRLNVALTRAKSGLIIIGNIPTLITSKVWNMLIHQFY 899
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 20/132 (15%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL---------VKQT 547
++ PNL +LN Q A+ +A+ +SL+ GPPGTGKT + +I L + +
Sbjct: 356 YNIPNLSNLNDYQTKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKRRFYKINRG 415
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
+LVCA SN AVD + K+ G+ VRV A + F ++IR NS
Sbjct: 416 EKKLLVCASSNNAVDVICSKLIEKGIPTVRVVADEQ--------FENCSDKIRE---NSL 464
Query: 608 LKKLLQLKEETG 619
LKK ++ E+ G
Sbjct: 465 LKKAIEFTEKKG 476
>gi|124087769|ref|XP_001346867.1| TRNA-splicing endonuclease positive effector [Paramecium
tetraurelia strain d4-2]
gi|145474903|ref|XP_001423474.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057256|emb|CAH03240.1| TRNA-splicing endonuclease positive effector, putative [Paramecium
tetraurelia]
gi|124390534|emb|CAK56076.1| unnamed protein product [Paramecium tetraurelia]
Length = 1124
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 243/486 (50%), Gaps = 77/486 (15%)
Query: 504 DLNRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATI---VYQLVKQTGS----PVLVC 554
+ N SQ A++ I R +SL+QGPPGTGKT T + VY+ +K +L+C
Sbjct: 499 NYNFSQATAIQQIILQDRGISLLQGPPGTGKTHTLIGLLSGVYEYMKIMNKFPKKKILIC 558
Query: 555 APSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPV-------------- 590
APSN A+D++ +I + GL K+VR+ E S +
Sbjct: 559 APSNAAIDEIIFRILQGGLFDCEGRSRTVKLVRLGVLDEENDKSVIIKQVSLEDVAQYQL 618
Query: 591 ----SFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRML-------------- 632
SF A +Q E+ EL K Q ++ E+ DE++ + L
Sbjct: 619 FNKSSFKANSDQKTTGELRIELSKTTQAIKKIKEMEKYDEQQKKQLNELWNKRNQLMQYL 678
Query: 633 ------KKNAEKS-------LLDNADVICCTCVGAGDPRLLKI--KFHSILIDESMQATE 677
K+N +++ ++ A+++C T AG +L K F +++DE+ Q TE
Sbjct: 679 EQVRTNKRNQKENYVLFCEKIISEAEILCSTLSTAGTDKLSKFIDSFELLIVDEAAQCTE 738
Query: 678 PECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYR 737
P +P+ LG +++IL+GD QL + ++SLFER++ +PF L++QYR
Sbjct: 739 PSNNIPLRLGMRKMILIGDPKQLPATTFSSVSQITHYNRSLFERILDNDFKPFFLDMQYR 798
Query: 738 MHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTS 797
MHP++ +FPS FY+ L + ER + P ++ +LF + +E S
Sbjct: 799 MHPQIREFPSLNFYDNKLIDHFSVYERLI-----PNNFFNQRVLFIDVESEE--TKDEKS 851
Query: 798 YVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
+ N+TE + + ++ + I+ + +GVI Y+ Q + ++ Q + EI++
Sbjct: 852 FQNQTECNMIVEVL-KNIKNAYPSQSLGVICAYKAQVRLIKLEIKRQ---LGDLMDEIQI 907
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
+VD+FQG+E+D+I+ SCVRS+ IGFL D RR+NVALTRAK + + GN L +
Sbjct: 908 NTVDSFQGQERDVILFSCVRSSSSGNIGFLQDGRRVNVALTRAKNALFIFGNAITLGQCQ 967
Query: 918 LWNNLL 923
LW NLL
Sbjct: 968 LWKNLL 973
>gi|440298360|gb|ELP90998.1| suppressor with morphological effect on genitalia family protein
(smg-2), partial [Entamoeba invadens IP1]
Length = 309
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 161/264 (60%), Gaps = 12/264 (4%)
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
+++ ++IDES Q+ EPE +I ++ +L+GD QL P V+ + + GL +S+FER
Sbjct: 15 VQYACVVIDESAQSIEPETFGAMIR-VQKAVLIGDVQQLPPTVLSTEGKKGGLEKSMFER 73
Query: 722 LVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
L++ + L QYRMHP+++KFP++ FY G L NGV D+R ++ P P P++
Sbjct: 74 LLLNKVPYALLTTQYRMHPQIAKFPNDNFYAGKLLNGVSEDDRSDQRLQGILPNPLFPVM 133
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
F +G E SG SY N E V+ + F R G+K +IG+I+PY QR L
Sbjct: 134 FVHCKGDEFYGVSGKSYGNSQEKEVVQYLIDLFNRKGIKDNEIGIISPYSTQRELL---- 189
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
++ IEVASVD FQG EK+ II+SCVRSN+ QGIGFL+D RRLNVALTRAK
Sbjct: 190 -------GVAHKTIEVASVDGFQGNEKEFIIISCVRSNEQQGIGFLSDHRRLNVALTRAK 242
Query: 902 YGIIVIGNPKVLSKQPLWNNLLNF 925
G++++G+ L ++ NL+ +
Sbjct: 243 RGLVIVGDAHTLISNQIFRNLMKY 266
>gi|401840571|gb|EJT43340.1| HCS1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 682
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 274/541 (50%), Gaps = 87/541 (16%)
Query: 439 ATTGFSVD--FIWKST---SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL 493
ATT +S + +I K+T ++ RM+ +RK + ++ + ++ + V+E LF +
Sbjct: 137 ATTFYSYNKLYILKTTNTVTYKRMESTMRKLS----EFTSPVQDKITQYLVNERLF---V 189
Query: 494 PKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL-VKQT 547
PK N+ P+LN SQ A+ A L++I GPPGTGKT T ++ QL +K
Sbjct: 190 PKSGELQNVGSFLNPNLNDSQKAAINFATNNDLTIIHGPPGTGKTFTLIELIQQLLIKNP 249
Query: 548 GSPVLVCAPSNIAVDQLTEKIH---------RTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
+L+C PSNI+VD + E++ R G + + R ++D L+ N
Sbjct: 250 EKRILICGPSNISVDTILERLTPLVSNNLLLRIGHPARLLDSNKRHSLD----ILSKKNT 305
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKR-----YRMLKKNAEK-------SLLDNADV 646
I +++ E+ KL+Q E +L + ++R ++L+K+ +K L+ + +
Sbjct: 306 IVR-DISQEIDKLIQ---ENKKLKNYKQRRENWNEIKLLRKDLKKREFKTIKDLIIQSRI 361
Query: 647 ICCTCVGAGDPRL---------LKIKFHSILIDESMQATEPECMVPVILGAKQ---LILV 694
+ T G+ L LK+ F +++IDE QA EP+C +P+I Q LIL
Sbjct: 362 VVTTLHGSSSRELCSLYRNDPNLKL-FDTLIIDEVSQAMEPQCWIPLIAHQNQFDKLILA 420
Query: 695 GDHCQLGPVVMCKKAARA--GLSQSLFERLVVLGIRPFR-----LEVQYRMHPELSKFPS 747
GD+ QL P + + L +LF+RL L I P R L +QYRM+ ++ +FPS
Sbjct: 421 GDNKQLPPTIKTEDDQNVIRNLETTLFDRL--LKIFPKREMIKFLNIQYRMNEKIMEFPS 478
Query: 748 NFFYEGSLQNGVCADERKL---SKIDFPWPVPDK-----PMLFYVTQGQE--EIAGSGT- 796
Y G L R L S +D D P+++Y TQG E E A T
Sbjct: 479 QSMYHGKLIADATVASRLLIDISSVDVSPSGDDDIDTKLPLIWYDTQGDEFPETADDATI 538
Query: 797 --SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
S N E + V+K ++ + IGVI+PY Q + L + + + L
Sbjct: 539 LGSKYNEGEIAIVKKYIESLKSLNVQQDSIGVISPYNAQVSHLKRLIHGKLEL-----NN 593
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
IE+++VD FQGREKD+II+S VRSN+ +GFL + RRLNVA+TR + ++V+GN +VL
Sbjct: 594 IEISTVDGFQGREKDVIILSLVRSNEEFEVGFLKEERRLNVAMTRPRRQLVVVGNIEVLQ 653
Query: 915 K 915
+
Sbjct: 654 R 654
>gi|183230332|ref|XP_654283.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169802981|gb|EAL48897.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 965
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 171/289 (59%), Gaps = 13/289 (4%)
Query: 640 LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
+L + +C T P LLK KF + ++DE+ Q+ EPE + +I ++ +L+GD Q
Sbjct: 622 ILSGIECVCSTLTICTRPTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQQ 680
Query: 700 LGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
L P + +A AG +S+FER + I+ L+ QYRMHP +S+F + FY L+NG
Sbjct: 681 LQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENG 740
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V + +R ++I +P P++F G E+ SGTSY N E ++++ + +
Sbjct: 741 VSSKDRFDNRIINFFPDYTNPIMFINCDGTEQYGSSGTSYNNAGEVQIIQEVVEKLLNND 800
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
++ +IG+I+PY+ Q+ + Q++ +I+VA++D FQG EK+ II SCVRS
Sbjct: 801 IEENEIGIISPYQAQQELISQYVS----------TKIKVANIDGFQGNEKEYIIFSCVRS 850
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN-FY 926
N G+GF+ND +RLNVALTRAK G+I+IGN L +WN L++ FY
Sbjct: 851 NQTLGVGFVNDYKRLNVALTRAKRGLIIIGNIPTLVTSKVWNMLIHQFY 899
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 20/132 (15%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL---------VKQT 547
++ PNL +LN Q A+ +A+ +SL+ GPPGTGKT + +I L + +
Sbjct: 356 YNIPNLSNLNDYQTKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKYRFYNINRG 415
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
+LVCA SN AVD + K+ G+ VRV A + F ++IR NS
Sbjct: 416 EKKLLVCASSNNAVDVICLKLIEKGIPTVRVVADEQ--------FENCSDKIRK---NSL 464
Query: 608 LKKLLQLKEETG 619
LKK ++ E+ G
Sbjct: 465 LKKAIEFTEKKG 476
>gi|255691334|ref|ZP_05415009.1| DNA helicase [Bacteroides finegoldii DSM 17565]
gi|260622976|gb|EEX45847.1| putative DNA helicase [Bacteroides finegoldii DSM 17565]
Length = 628
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 262/527 (49%), Gaps = 51/527 (9%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA E T V + TS+ M AL + A + LLG + FR
Sbjct: 122 AGALMELQTDGVLGVQLYFDETSYRAMFEALEDVIRAKGNRLAELRDTLLG--TLKPGFR 179
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 180 ELYPVRF-----PWLNSTQETAVNKVLCARDVSIVHGPPGTGKTTTLVEAIYETLHRE-P 233
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------A 594
V+VCA SN AVD + EK+ G+ V+R+ +R D +SF
Sbjct: 234 QVMVCAQSNTAVDWICEKLVDRGVPVLRIGNPTR-VNDKMLSFTYERRFESHPAYPELWG 292
Query: 595 LHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCV 652
+ IR EM +++ +E G S R R L+ L D+A VI T V
Sbjct: 293 IRKSIR--EMGGRMRRG-SYEEREGMRSRMSRLRDRATELEIQINADLFDSARVIASTLV 349
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
+ L +F ++ IDE+ QA E C + I A +++L GDHCQL P + C +AAR
Sbjct: 350 SSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKADRVVLAGDHCQLPPTIKCIEAARG 408
Query: 713 GLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
GL +L E++V L +VQYRM+ + +FPS++FY+G L+ + R +DF
Sbjct: 409 GLEYTLMEKVVRQKPSSVSLLKVQYRMNEAIMQFPSDWFYQGELE--AAPEVRYRGILDF 466
Query: 772 PWPVPDKPMLFYVT---QGQEEIAGSGTSYVNRTEASNVEKITTRFI-RCGMK---PEQI 824
D PM + T + EE G +N+ EA+ + + +I R G + E+I
Sbjct: 467 -----DSPMSWIDTSEMEFHEEFVGESFGRINKQEANLLLEELEAYINRIGKERILEERI 521
Query: 825 --GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
G+I+PY+ Q +L ++ S + I V +VD FQG+E+D++ +S VR+N+
Sbjct: 522 DFGLISPYKAQVQYLRSKIK-GSSFLRPLRSLITVNTVDGFQGQERDVVFISLVRANEEG 580
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
IGFLND RR+NVA+TRA+ ++++G L+K P + L+ F K++
Sbjct: 581 QIGFLNDLRRMNVAITRARMKLVILGEAATLTKHPFYKRLMAFIKKE 627
>gi|398347439|ref|ZP_10532142.1| DNA and RNA helicase [Leptospira broomii str. 5399]
Length = 627
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 239/451 (52%), Gaps = 43/451 (9%)
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P+LN SQ A+ +Q L L+ GPPGTGKT T + LV + G VLV AP+N A
Sbjct: 173 PELNDSQRRAISAILQTEDLILLHGPPGTGKTKTITEAIRILVDR-GKKVLVSAPTNAAT 231
Query: 562 DQLTEKIHRTGLKVVRVC--AKSREAIDSPVSF---LALHNQIRNMEMNS-ELKKLLQ-- 613
D L E + R G+ +R+ A+ E++ S VS L H + +E + E+ +LL+
Sbjct: 232 DLLAESLGRMGVSALRIGHPARMSESVLS-VSLDANLNRHPDFKLIERDKREIGELLKKA 290
Query: 614 -----------------LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
L +E EL ++R ++L + LL++ VI CT GA
Sbjct: 291 GKYKRTFGREEAEERRRLYQEAKELRKGIKERQKVLVRY----LLESHPVIVCTHTGASS 346
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA-RAGLS 715
L K+ F ++DE QATEP +P IL A+++++ GD QL P V+ + + L
Sbjct: 347 SLLDKLNFDYAVLDEGSQATEPASWIP-ILRAERIVIAGDPRQLPPTVLSEDPLLKIPLM 405
Query: 716 QSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
+ L +R+ +G R + L+ QYRM + FP+ FY G L +G+ +ER + P+
Sbjct: 406 ERLLDRMNSVG-RVYLLDTQYRMTDPIQSFPNRRFYAGRLVSGIPEEERSTNPFPSETPL 464
Query: 776 PDKPMLFYVTQGQ---EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
D +F T G EE+ + S NR EA I R + G PE + +I+PY
Sbjct: 465 FDSSFVFIDTSGTDSGEELFDA--SLGNRWEAEFTITILKRILESGWSPEDLVLISPYRY 522
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
QR FL++ + + LP + ++IE+ +VD+FQGREK +I S VRSN IGFL++ RR
Sbjct: 523 QR-FLLEEI-LRKELPIDV-EKIEIETVDSFQGREKKGVIFSLVRSNSEGNIGFLSEERR 579
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
NV +TRAK +++IG+ L +Q + +L+
Sbjct: 580 WNVGMTRAKRLLVLIGDGSTLGEQEFFQDLI 610
>gi|260950507|ref|XP_002619550.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
gi|238847122|gb|EEQ36586.1| hypothetical protein CLUG_00709 [Clavispora lusitaniae ATCC 42720]
Length = 1970
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 164/512 (32%), Positives = 256/512 (50%), Gaps = 102/512 (19%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV------------------ 544
++N+SQ A+ + Q SLIQGPPGTGKT T IV +
Sbjct: 1255 NVNKSQAKAILGSFQNNGFSLIQGPPGTGKTKTILGIVGNTLSHSKKSNVIEVPGVTSSD 1314
Query: 545 ----KQTGSPVLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPV 590
K+ G VL+CAPSN AVD+L ++ R G+ K+VR+ +AI+S V
Sbjct: 1315 HHSDKEQGPKVLICAPSNAAVDELVVRL-RQGVHNAKGEEMIPKIVRL--GRSDAINSSV 1371
Query: 591 SFLALHNQI------RNM--------------------EMNSELKK-------------- 610
L L QI RN+ E+ +L++
Sbjct: 1372 RDLGLEEQIEKQLKVRNISVVIDPNIRTEHNKCIAERDEIREKLRRGDLDDEKIAALETQ 1431
Query: 611 LLQLKEETGELSSA-DEKR------YR---MLKKNAEKSLLDNADVICCTCVGAGDPRL- 659
L ++ ++ EL DE+R YR + K+ + +L A VIC T G+ L
Sbjct: 1432 LREINKKRSELGKRLDEQRENASIAYRTKEIEKRQLQAKILSEAQVICSTLSGSAHDFLA 1491
Query: 660 -LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
+ +KF ++IDE+ Q E ++P+ G K+ I+VGD QL P V+ +KAA +SL
Sbjct: 1492 SMSMKFDQVIIDEACQCVELSAIIPLRYGCKKCIMVGDPNQLPPTVLSQKAASFKYEESL 1551
Query: 719 FERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV-- 775
F R+ + L+VQYRMHP++SKFPS FY+ L +G + K + PW
Sbjct: 1552 FVRMQRTNPESVYLLDVQYRMHPQISKFPSAQFYKSKLTDG----PHMMEKNNRPWHADF 1607
Query: 776 PDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEG 832
P P F+ G+ + S+ N +EA ++ + ++ + + +IG+I+PY+
Sbjct: 1608 PLSPYRFFDIGGRHQQNVQTKSFFNPSEAKVALELVEKLMQILPQDKFRGRIGIISPYKE 1667
Query: 833 Q-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
Q R ++ G+L I EI+ +VD FQG+EK++IIMSCVR+++ +GFL+D R
Sbjct: 1668 QIRTLKDTFVRKYGNL---ILNEIDFNTVDGFQGQEKEIIIMSCVRASESGSVGFLSDVR 1724
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
R+NVALTRA+ + ++GN + L + +W+ L+
Sbjct: 1725 RMNVALTRARTTLWILGNKQSLRRDKIWSKLI 1756
>gi|390596463|gb|EIN05865.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1024
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 240/482 (49%), Gaps = 76/482 (15%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTG--SPVLVCAPS 557
P LP LN SQ AV + +SL+QGPPGTGKT T V L + P+LVC +
Sbjct: 476 PVLP-LNESQTRAVAMMVGERVSLVQGPPGTGKTKTIIEAVKLLKRHFAVPHPILVCTFT 534
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNMEMNSEL-- 608
N+AVD L E + L +RV + +D+ + L++++ +E E
Sbjct: 535 NVAVDNLVEGLA-PSLSPLRVGYGGKVKPSLYPHTLDAKLEQHELYSEVLKLERQEEALE 593
Query: 609 KKLLQLK-----------------EETGELSSADEKRYRM-------------------- 631
K+++ L+ E + ++A ++R R+
Sbjct: 594 KRVVSLRMSSTKAAEKLSIMPLDAEHDRKRANATKRRDRLDQEVTQCGTSLGNIRKRIYA 653
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
K+ ++ ADV+C TC+ + L I F + +DE+ +TEP ++P++ G++ +
Sbjct: 654 FKQQMLSDVVHAADVVCTTCITSACTALNVIDFPVVFLDEASMSTEPASLIPLMKGSQHM 713
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFF 750
L+GDH QL PV+ ++A GL SLFERL G+ P L++QYRMHP++SKFPS F
Sbjct: 714 TLIGDHKQLPPVITSREAIAGGLGISLFERLTEEGVVPSIMLDLQYRMHPQISKFPSAEF 773
Query: 751 YEGSLQN-------GVCADERKLSK--IDFPWPVPDKP-MLFYVTQGQEEIAGSGTSYVN 800
Y +L++ GV A R + + D+P ++F QG E + S VN
Sbjct: 774 YNFALRDGMLDSSGGVPAQLRPPTSAHLQMNPQTGDRPSVIFLDHQGLE--SPKDRSKVN 831
Query: 801 RTEASNVEKITTRFI--RCGMKPEQIGVITPYEGQRAFLVQ--------HMQYQGSLP-- 848
T+A V + + ++ E IGVI PY Q L + ++Q +L
Sbjct: 832 YTDADIVCSVIEDLLIQNPDLRGEDIGVIAPYVAQIRLLTRLLTTDAKSQARFQAALGDQ 891
Query: 849 -AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
A +I++ +VD F+GREKD+II S VRSN +GFL D RRLNV LTRAK G+ V+
Sbjct: 892 RAMQLPQIDIKTVDGFEGREKDVIIFSTVRSNSSGHVGFLADRRRLNVGLTRAKRGLFVV 951
Query: 908 GN 909
GN
Sbjct: 952 GN 953
>gi|400602498|gb|EJP70100.1| DNA helicase [Beauveria bassiana ARSEF 2860]
Length = 691
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 239/482 (49%), Gaps = 70/482 (14%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ QL+K VLVC PSNI+V
Sbjct: 208 PTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLIK-LNKRVLVCGPSNISV 266
Query: 562 DQLTEKIHRTGLKVVRVCAKSR----------EAIDSPVSFLALHNQIRNMEMNSE---L 608
D + E++ + ++R+ +R +A+ A+ +R EM+++ +
Sbjct: 267 DNIVERLSPHKVPILRLGHPARLLPSVVNHSLDALTQTSEAGAIVKDVR-AEMDAKQASI 325
Query: 609 KKLLQLKEET---GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
KK KE G+L K YR ++ L+ + V+ T GAG +L KF
Sbjct: 326 KKTKSGKERRQIYGDLREL-RKEYRERERKCVSHLVGGSKVVLATLHGAGGHQLRAEKFD 384
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA------------- 712
++IDE+ QA E +C VP +L A + + GDH QL P + +A +
Sbjct: 385 VVIIDEASQALEAQCWVP-LLSANKAVCAGDHLQLPPTIKSSNSAVSLKLKDGTEAKPIK 443
Query: 713 --GLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
L +LF+RL+ L + L QYRMH ++ +FPS+ YE L + R L
Sbjct: 444 GQTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYESKLVAAGAVNARLLK- 502
Query: 769 IDFPWPVPD-----KPMLFYVTQGQE----------------EIAGSGTSYVNRTEASNV 807
+ + V D +P++F TQG + +++ G S N EA+ V
Sbjct: 503 -ELAYEVEDNEDTNEPLIFIDTQGGDFPERSEEDDADNPKKGKVSLHGDSKSNEMEAALV 561
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
++ +R + G++ E I V+TPY Q A L + + IE+ SVD FQGRE
Sbjct: 562 QQHVSRLVEAGLRAEDIAVVTPYNAQLAVLAPLKEK--------FPGIELGSVDGFQGRE 613
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFY 926
K+ II+S VRSN +GFL + RRLNVA+TR K + VIG+ + + + +NF
Sbjct: 614 KEAIIVSLVRSNSKGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKRGSSFLKRWMNFL 673
Query: 927 KE 928
++
Sbjct: 674 ED 675
>gi|111219431|ref|XP_646847.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
gi|90970906|gb|EAL72919.2| DNA2/NAM7 helicase family protein [Dictyostelium discoideum AX4]
Length = 2314
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 235/440 (53%), Gaps = 50/440 (11%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVK-QT 547
R +P + + +LN SQ A++ ++ + ++LIQGPPGTGKT T ++ L+
Sbjct: 1380 RMEIPSLLRSICIQELNASQFNAIETSLSKKGITLIQGPPGTGKTTTIYYLLSILLAINP 1439
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
+LVC PS+ +VD++ ++ + L + V K L N +R
Sbjct: 1440 KFKILVCGPSHASVDEVAKRCLKKSL--INVDGKP-----------YLPNMVR------- 1479
Query: 608 LKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL-KIKFHS 666
+ KL + + +S D+ + K ++ NA+++ T +G + K +
Sbjct: 1480 IGKLQNISPDCHRISPYDKTPAQ------RKEIIRNANIVFSTLSASGSGSVRSNFKANI 1533
Query: 667 ILIDESMQATEPECMVPVILG-AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-V 724
+L+DES Q++EP ++P+ +G ++LILVGD QL P + +A GL+ SLFERL V
Sbjct: 1534 VLVDESTQSSEPASLIPLCIGNIEKLILVGDPLQLPPTIFSSGSAENGLNISLFERLSKV 1593
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYV 784
L + L QYRMHP +S+FPSN FY+ L +G ++ +F + P+ FY
Sbjct: 1594 LPVE--MLNTQYRMHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYD 1651
Query: 785 TQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRAFLV-Q 839
+E +G S N+ E + V +K+ + C K G+ITPY+ Q++ + Q
Sbjct: 1652 VIDSKEESGKR-SLKNKLEITMVFTLIKKLVQDYPEC--KKFSFGIITPYKLQKSEIKEQ 1708
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
H Q+ L IE +++D QG EKD+II+SCVRS + IGFL+D RR+NVALTR
Sbjct: 1709 HKQFNYPL------NIETSTIDGVQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTR 1759
Query: 900 AKYGIIVIGNPKVLSKQPLW 919
AK+G+ VIGN K+L K W
Sbjct: 1760 AKFGLFVIGNSKLLKKDRTW 1779
>gi|367042072|ref|XP_003651416.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
gi|346998678|gb|AEO65080.1| hypothetical protein THITE_2111680 [Thielavia terrestris NRRL 8126]
Length = 2051
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 258/541 (47%), Gaps = 109/541 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV--------------YQLVKQTGS 549
LN Q A+ +A + +LIQGPPGTGKT T +V L + G+
Sbjct: 1317 LNPGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSNGGVALARPGGA 1376
Query: 550 P---------VLVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVSF 592
+LVCAPSN AVD+L ++ + G+K + V R +AI++ V
Sbjct: 1377 APAGSAPSKKLLVCAPSNAAVDELVLRL-KAGVKTMNGTTHKIEVLRLGRSDAINAAVKD 1435
Query: 593 LALHNQIR---NMEMN----SELKKLLQ----LKEETGELS-------SADEKRYRM--- 631
+ L +R E+N S+ +KL Q LKE+ EL ++D + M
Sbjct: 1436 VTLDELVRIRMEAEINNGGPSDREKLHQEAGELKEKVAELKPQLEAARASDNRALAMKLQ 1495
Query: 632 --------------LKKNAEKS-------------------LLDNADVICCTCVGAGDPR 658
K +A+KS +LD A V+C T G+G
Sbjct: 1496 REFDELKRRQAHIGAKIDAQKSDGNTFAREVEIKRRQIQQDILDKAQVLCATLSGSGHEM 1555
Query: 659 L--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR G Q
Sbjct: 1556 FKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQ 1615
Query: 717 SLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW-- 773
SLF R+ + L ++QYRMHPE+S+FPS FYEG LQ+G + +L PW
Sbjct: 1616 SLFVRMQKNHAKDVHLLDMQYRMHPEISRFPSKVFYEGLLQDGADMGKLRLQ----PWHQ 1671
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF----IRCGMKPEQIGVITP 829
V P F+ +G +E S VN E ++ RF +K +IG+ITP
Sbjct: 1672 SVLLGPYRFFDVKGSQERGPKNQSLVNEEELKVALQLYRRFRTDYSNVDLK-GKIGIITP 1730
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y+ Q L Q ++ I +EIE + DAFQGRE ++II SCVR++ GIGF+ D
Sbjct: 1731 YKAQLFRLRQ--RFTEKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTD 1788
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSK 949
RR+NV LTRAK + ++G+ + L + W L+ K++ G + + L S+
Sbjct: 1789 IRRMNVGLTRAKSSLWILGDSRALVQGEFWAKLIEDAKQRDRYTNGNI------MALLSQ 1842
Query: 950 P 950
P
Sbjct: 1843 P 1843
>gi|379729756|ref|YP_005321952.1| AAA ATPase [Saprospira grandis str. Lewin]
gi|378575367|gb|AFC24368.1| AAA ATPase [Saprospira grandis str. Lewin]
Length = 637
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 241/460 (52%), Gaps = 41/460 (8%)
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC 554
H +L LN SQ AV+ + ++++ GPPGTGKT T + +LVK+ SPVLVC
Sbjct: 175 HRRPGDLGQLNNSQAEAVQQILAAEDVAVVHGPPGTGKTTTLVAAIKELVKRE-SPVLVC 233
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN----------MEM 604
APSN A D LTE++ GL VVRV SR +D V ++ ++ +
Sbjct: 234 APSNPASDLLTERLADQGLNVVRVGNVSR--LDEKVLQHSIEGILQERAEMKEVKKMKKE 291
Query: 605 NSEL-KKLLQLKEETGELSSADEKR------------YRMLKKNAEKSLLDNADVICCTC 651
+EL +K + K + G + +E+R RM++ + +L AD ICCT
Sbjct: 292 AAELFRKAGKFKRKFGP-NERNERRETYQEAKNLIRHARMMEDYVIEKVLSEADAICCTL 350
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
V + + + +FH+++IDE+ QA EP C + I A ++IL GD QL P V +KAA+
Sbjct: 351 VSSMNRYIENRRFHTVVIDEAAQALEPACWI-AIAKADKVILAGDPFQLPPTVKSRKAAQ 409
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
GLS +L E+ V R L+ QYRMH ++ +F + +FYEG LQ AD K +
Sbjct: 410 KGLSITLLEKAVERLDRVQLLKTQYRMHEQIMQFSNQYFYEGQLQ---AADFVKNWTLAM 466
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ--IGV 826
P+ F T G E+I S N E + + + K + I V
Sbjct: 467 RPGGDTTPVEFIDTAGCSFDEKINPETLSSYNPEEYYILRQHLDHLLSFADKQVRPSIAV 526
Query: 827 ITPYEGQRAFLVQHMQYQ-GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
I+PY Q F+ + M+ P +I + ++DAFQG+E+D++ +S VRSN+ IG
Sbjct: 527 ISPYREQVRFMQEQMETDFDHFPDD---DITIDTIDAFQGQERDVVYISLVRSNERGEIG 583
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
FL D RRLNVA+TRA+ +I+IG+ L + P + + +++
Sbjct: 584 FLKDTRRLNVAMTRARKKLIIIGDSATLGQHPFYQSFMDY 623
>gi|213407736|ref|XP_002174639.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
gi|212002686|gb|EEB08346.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
Length = 655
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/474 (34%), Positives = 242/474 (51%), Gaps = 57/474 (12%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
DLN SQ AV A+ P L+LI GPPGTGKT T +V Q K G VLVC PSN++VD
Sbjct: 203 DLNESQKKAVSFAVSAPELALIHGPPGTGKTHTLVEVVRQFAK-LGQRVLVCGPSNLSVD 261
Query: 563 QLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFL------------------ALHNQIRN 601
L E++ G+ +VR+ +R ++ +++L ALH +I
Sbjct: 262 NLVERLAPCGIPMVRLGHPARLLPGVVNYSLAYLSRTGNAGEVLRAISQDADALHAKISK 321
Query: 602 MEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
+ E K E + A K Y+ + + ++ + V+ T GAG L
Sbjct: 322 TKSGRE-------KREIYKSIRALNKDYKKYEDKVVRDIIARSQVVFATLHGAGSKLLSH 374
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
+F ++IDE+ QA E +C +P +L K+ IL GDH QL P V K G SLFE
Sbjct: 375 KQFDVVIIDEASQALEAQCWIP-LLQTKKAILAGDHHQLPPNVRTK-----GRYVSLFES 428
Query: 722 LVV-LGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF--PWPVPD 777
L+ G R R L VQYRMH +S F S FYEG L+ +R L + + +
Sbjct: 429 LLSRYGPRVKRFLNVQYRMHEVISAFSSKSFYEGQLKPDSSVKDRLLKDLSGVEDTDLTN 488
Query: 778 KPMLFYVTQGQ---EEIAGSGTSYV------NRTEASNVEKITTRFIRCGMKPEQIGVIT 828
+ FY T + +E + S S + N+ EA V + G+ P +I +IT
Sbjct: 489 DALYFYDTMHEYFEDENSVSEKSVLLQMSKSNQWEAKIVCNHAASLVDAGLNPSEIAIIT 548
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY Q A L++++ ++ +L IEV S+D+ QGREK+ II S VRSND + IGF++
Sbjct: 549 PYNAQ-ATLLRNLLHERNLA------IEVGSIDSVQGREKEAIIFSLVRSNDEREIGFMS 601
Query: 889 DPRRLNVALTRAKYGIIVIGNP-KVLSKQPLWNNLLNFYKEQKVLVEGPLNNLK 941
+ RRLNVA+TRAK + V+G+ V + + +++ +E +++ ++LK
Sbjct: 602 EKRRLNVAITRAKRHLCVVGDAMTVRNGSDFLKSWIDYMEENAIVLAPTEDDLK 655
>gi|171684931|ref|XP_001907407.1| hypothetical protein [Podospora anserina S mat+]
gi|170942426|emb|CAP68078.1| unnamed protein product [Podospora anserina S mat+]
Length = 2074
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/525 (32%), Positives = 251/525 (47%), Gaps = 101/525 (19%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV------------------- 544
LN Q A+ +A + +L+QGPPGTGKT T +V L+
Sbjct: 1344 LNLGQAKAILNAKENDGFTLVQGPPGTGKTKTIVAMVGCLLSNSLKGSNGAVSIPRPGLT 1403
Query: 545 -KQTGSP---VLVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVSF 592
K T +P +LVCAPSN AVD+L ++ + G+K + V R +AI++ V
Sbjct: 1404 AKPTTAPARKLLVCAPSNAAVDELVLRL-KQGVKTMNGTHHKIEVLRLGRTDAINAGVKD 1462
Query: 593 LALHNQIR-NME--MNS--------------ELK-KLLQLKEETGELSSAD--------- 625
+ L Q++ ME +NS E+K KL +L+ + +AD
Sbjct: 1463 VTLDEQVKARMEAVINSSGPSDREQMHKEAGEIKVKLSELRPQLDAAQAADDHQLMNKLK 1522
Query: 626 ---------------------------EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
++ + ++ ++ +LD A V+C T G+G
Sbjct: 1523 REYDDLMKRRAHIGARIEADKSSGNTFQREVEIKRRQVQQEILDKAQVLCATLSGSGHEM 1582
Query: 659 L--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR G Q
Sbjct: 1583 FKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQ 1642
Query: 717 SLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW-- 773
SLF R+ + L ++QYRMHPE+S+FPS FYEG LQ+G +L PW
Sbjct: 1643 SLFVRMQKNHAKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMAGLRLQ----PWHQ 1698
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPY 830
V P F+ +G + S VN E K+ RF + +IG+ITPY
Sbjct: 1699 SVYLGPYRFFDVKGSQSRGPKNQSLVNEEELKVAMKLYQRFRSDYSNVDARGKIGIITPY 1758
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
+ Q L Q ++ I +EIE + DAFQGRE ++II SCVR++ GIGF+ D
Sbjct: 1759 KAQLHRLRQ--RFTDKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDI 1816
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
RR+NV LTRAK + ++G+ + L + WN L+ KE+ G
Sbjct: 1817 RRMNVGLTRAKSSLWILGDSRALQQGEYWNKLIEDAKERDRYTTG 1861
>gi|346325571|gb|EGX95168.1| tRNA-splicing endonuclease, putative [Cordyceps militaris CM01]
Length = 2040
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 168/543 (30%), Positives = 249/543 (45%), Gaps = 102/543 (18%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVK-------QTGSPV----- 551
LNR Q +V A + +LIQGPPGTGKT T +V L+ G+PV
Sbjct: 1304 LNRGQALSVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSGQLAQAPAKGTPVGVPVR 1363
Query: 552 ---------------LVCAPSNIAVDQLTEKIHRT------GLKVVRVCAKSR-EAIDSP 589
LVCAPSN AVD+L ++ R K + V R +AI +
Sbjct: 1364 PGVANQPAGSRPKKLLVCAPSNAAVDELVTRLKRGITTISGKTKTINVLRLGRSDAISAA 1423
Query: 590 VSFLALHNQIR-NMEMNSELKKLLQLKEETGE---------------LSSADEKR----- 628
V + L +R M+ +S K ++E+ E L A+EK
Sbjct: 1424 VKDVTLDELVRVRMQGDSSKDKAKAIREKLHERASEIKEQLGILRPRLDEANEKEDQDAR 1483
Query: 629 ----------------------------------YRMLKKNAEKSLLDNADVICCTCVGA 654
M ++ ++ +L+NA V+C T G+
Sbjct: 1484 NKLLRQFDDLKREQRDIGKQIEADRDSGNSAAREVEMKRRQIQQEILNNAHVLCATLSGS 1543
Query: 655 GDP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
G R L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR
Sbjct: 1544 GHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAARF 1603
Query: 713 GLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
G QSLF R+ + L ++QYRMHPE+S FPS FYEG L++G D L + +
Sbjct: 1604 GYDQSLFVRMQQNHPKSVHLLDMQYRMHPEISLFPSKEFYEGQLRDG--QDMAGLRQQPW 1661
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR----CGMKPEQIGVI 827
P F+ QG +E G S VN E ++ RF + C + +IG+I
Sbjct: 1662 HKSALLGPYRFFDVQGVQERGHRGQSLVNTRELEVALQMYDRFRKEYSECNLV-GKIGII 1720
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+ Q +++ I IE + DAFQGRE ++II SCVR++ GIGF+
Sbjct: 1721 TPYKAQ--LFELRKRFRARYGEDICDIIEFNTTDAFQGRECEIIIFSCVRASATGGIGFM 1778
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILF 947
D RR+NV LTRAK + ++G+ + L + W L+ K + +G + N+ +
Sbjct: 1779 TDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKSRDRFTQGDIVNMFRKPLER 1838
Query: 948 SKP 950
+KP
Sbjct: 1839 AKP 1841
>gi|383810355|ref|ZP_09965851.1| AAA domain / AAA domain multi-domain protein [Prevotella sp. oral
taxon 306 str. F0472]
gi|383357100|gb|EID34588.1| AAA domain / AAA domain multi-domain protein [Prevotella sp. oral
taxon 306 str. F0472]
Length = 646
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 242/464 (52%), Gaps = 51/464 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+ LP LN +Q AV + + ++++ GPPGTGKT T + + + + S VLVCA
Sbjct: 188 FAPIRLPWLNPTQEKAVNEVLWAKDVAIVHGPPGTGKTTTMVEAINETLMRE-SQVLVCA 246
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D + F R E + + +L ++
Sbjct: 247 QSNMAVDWISEKLVDRGINVLRIGNPTR-VNDKMLGF----TYERKFEAHPDYPQLWSIR 301
Query: 616 EETGELSSADEK-------RYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLK 661
+ EL + ++ + LK A + L A VI T VGA +
Sbjct: 302 KAIRELRNHRKRSSENYHQKMERLKSRATELEIRINSELFGEARVIASTLVGANSRVMEG 361
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
KF ++ IDE+ QA E C +P I A ++I GDHCQL P V A AGL ++L ER
Sbjct: 362 QKFTTLFIDEAAQALEAACWIP-IRRASRVIFAGDHCQLPPTVKSLAALHAGLGKTLMER 420
Query: 722 LV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP--WP 774
+V V+ + L+VQYRM+ E+ +F SN+FY G +++ R + D P W
Sbjct: 421 VVENKPEVVTL----LKVQYRMNEEIMRFSSNWFYGGQVESAPQIKYRGILDYDNPMVWI 476
Query: 775 VPDKPMLFYVTQG---------QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---P 821
L ++G +E+ G +N+ EA ++ + + F + G +
Sbjct: 477 DTSDSSLENQSEGGQNEDKSIFKEQFVGESFGRINKGEAELTLQTLQSYFTKIGKQRILD 536
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I GVI+PY Q FL ++ + K Y+ I V +VD FQG+E+D+I++S VRS
Sbjct: 537 ERIDVGVISPYRAQVQFLRGLIKKREFF--KPYRSLISVNTVDGFQGQERDVILISLVRS 594
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
ND IGFL D RR+NVA+TRA+ +I++GN + +++ P + L
Sbjct: 595 NDAGQIGFLRDLRRMNVAITRARMKLIILGNIQTMTQHPFYKKL 638
>gi|322701388|gb|EFY93138.1| putative SEN1 protein [Metarhizium acridum CQMa 102]
Length = 2082
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 173/546 (31%), Positives = 254/546 (46%), Gaps = 110/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQ----------TGSPV-- 551
LN Q AV A +LIQGPPGTGKT T +V L+ + G+P+
Sbjct: 1306 LNHGQAVAVLGAQDNDGFTLIQGPPGTGKTKTITAMVGSLLSEQLAQVSNGVPVGAPLRP 1365
Query: 552 ---------------LVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDS 588
LVCAPSN AVD+L ++ ++G+K + V R +AI++
Sbjct: 1366 SAGAIPAAQGRPKKLLVCAPSNAAVDELVLRL-KSGIKTSSGKTKPINVLRLGRSDAINA 1424
Query: 589 PVSFLALHNQIR-NME-------MNSELKKL----LQLKEETGELSSA-DEKRYR----- 630
V + L +R ME +E KL ++KEE E+ DE R +
Sbjct: 1425 AVKDVTLDELVRIRMEGDNTKDKAKAERDKLHGDAAKIKEELAEIRQLLDEARAQDNRIT 1484
Query: 631 -------------------------------------MLKKNAEKSLLDNADVICCTCVG 653
M ++ ++ +L++A V+C T G
Sbjct: 1485 QNTLSRKFDELKRQQMNIGKQIDANKDSGNSLAREMEMRRRQVQQEILNSAHVLCATLSG 1544
Query: 654 AGDP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
+G R L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR
Sbjct: 1545 SGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAAR 1604
Query: 712 AGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
G QSLF R+ R L ++QYRMHPE+S FPS FYEG LQ+G D +L +
Sbjct: 1605 FGYDQSLFVRMQQNHPRSVHLLDMQYRMHPEISMFPSKEFYEGQLQDG--QDMLQLRQQP 1662
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR----CGMKPEQIGV 826
+ P F+ +G +E G S VN E +I RF + C + +IG+
Sbjct: 1663 WHQSALLGPYRFFDVEGVQEKGRKGQSLVNTRELQVAMEIYDRFSKEYKQCDLT-GKIGI 1721
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPY+ Q ++ I IE + DAFQGRE ++II SCVR++ GIGF
Sbjct: 1722 ITPYKAQ--LFELRNRFTSRYGENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGIGF 1779
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
+ D RR+NV LTRAK + ++G+ + L + W L+ K + +G + L +
Sbjct: 1780 MTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKARDRYTKGDI------LGM 1833
Query: 947 FSKPKQ 952
F KP Q
Sbjct: 1834 FRKPLQ 1839
>gi|358057175|dbj|GAA97082.1| hypothetical protein E5Q_03757 [Mixia osmundae IAM 14324]
Length = 733
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 251/500 (50%), Gaps = 72/500 (14%)
Query: 462 RKFAVDDQSVSAYIYHRLLG-HNVDEVLFRCHLPKHFSAPNLPD--LNRSQVYAVKHAIQ 518
RK +D+ S S + LLG + E P+ S + D LN+SQ AVK A+
Sbjct: 226 RKARLDETSASLSLSQILLGMQEISE-------PQQKSDVTILDDALNQSQQDAVKFALH 278
Query: 519 -RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
R ++LI GPPGTGKT T I+ QLV+ G VLVC SN+AVD + E++ + + R
Sbjct: 279 AREVALIHGPPGTGKTSTLIEIIRQLVR-LGQRVLVCGASNLAVDNIVERLQVHSVPLTR 337
Query: 578 VC-------AKSREAIDSPVSFLA---LHNQIRN--MEMNSELKK-LLQLKEETGELSSA 624
+ A R +D + A L +R+ ++ ++L K LQ K +L
Sbjct: 338 LGHPARILEATQRSTLDYQTAHSANGALAQDVRDDIAKIFADLAKGKLQGKGRRAKLDEI 397
Query: 625 D--EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMV 682
K R+ + S++ A V+ CTC GAG ++++ F +IDE+ QA E C +
Sbjct: 398 KLLRKELRVREAGVTSSVIGQARVVLCTCHGAGSKQIMRDTFDVAIIDEAAQALEGSCWI 457
Query: 683 PVILGAKQLILVGDHCQLGPVVMCK-------KAARAGLSQS------------LFERLV 723
P IL A++L+L GD QL P + K + A +S+S LF+RL+
Sbjct: 458 P-ILKAQKLVLAGDPLQLPPTIKTSDKDFKQAKVSLASISKSSKLCSARNLETTLFDRLL 516
Query: 724 VLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL-----SKIDFPWPVP 776
+ + L +QYRM+ + +F S+ YEG L + +R L +K D V
Sbjct: 517 AMYGAKIKCLLSIQYRMNERIMRFASDALYEGKLVAALQVKDRLLCDLVETKGD---DVL 573
Query: 777 DKPMLFYVTQGQ-------EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
D P++F T G EE S N EA V K + + G+ P+ I VI+P
Sbjct: 574 DHPVIFIDTTGNDMYERADEETGVRTLSKYNENEAVQVVKHISEIVSAGLPPKCIAVISP 633
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q + L + + LP +I V S+D++QGRE + II+S VRSND + +GFL +
Sbjct: 634 YNAQVSLLRSLLVH---LP-----DISVGSIDSWQGREAECIIISLVRSNDQREVGFLKE 685
Query: 890 PRRLNVALTRAKYGIIVIGN 909
RRLNVA+TRAK + V+G+
Sbjct: 686 SRRLNVAMTRAKRQLCVVGD 705
>gi|50303681|ref|XP_451783.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640915|emb|CAH02176.1| KLLA0B05555p [Kluyveromyces lactis]
Length = 1997
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 254/530 (47%), Gaps = 111/530 (20%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-------------- 549
LN SQ A+ + + SLIQGPPGTGKT T +IV + + +
Sbjct: 1327 LNTSQATAILSTVTTQGFSLIQGPPGTGKTKTILSIVGYFISKANTNSKNTVTHTIITPT 1386
Query: 550 ------------PVLVCAPSNIAVDQLTEKIHRTGL---------KVVRVCAKSREAIDS 588
VL+CAPSN AVD+L ++ L ++VR+ +A++
Sbjct: 1387 NTTSTEQLLERQKVLICAPSNAAVDELVLRLREGVLDYSGNTFRPEIVRIGRS--DAVNE 1444
Query: 589 PVSFLALHNQI---------------------------RNM------------------- 602
V L L ++ R M
Sbjct: 1445 SVKDLTLEEKVDKKLGGSDYEMVQDSALNQKFQDALQKRKMLQAKLNKEDGNPNSSLSSN 1504
Query: 603 ---EMNSELKKLLQLKEETG----ELSSADEKRYRMLKKN---AEKSLLDNADVICCTCV 652
++ E++ L +L E G E+ ++ +YR ++N A+ +L +D+IC T
Sbjct: 1505 EIADIQMEIRDLRRLISEMGKQKDEIRESNSLKYRNREQNRRKAQARILAESDIICSTLS 1564
Query: 653 GAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
G+ L L +KF +I+IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1565 GSAHDVLASLGVKFDTIIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAAS 1624
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
+QSLF R+ P+ L+VQYRMHP +SKFPS FY+G LQ+G E ++ D
Sbjct: 1625 DMKYNQSLFVRMQK-NCSPYLLDVQYRMHPAISKFPSLEFYKGKLQDGSSVQE--VNTRD 1681
Query: 771 FPWPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEASN----VEKITTRFIRCGMKPEQIG 825
+ P P F+ + G+++ SY N E VE + + +IG
Sbjct: 1682 WHKKYPFGPYKFFDIVTGKQKQNTKTMSYTNPEETKVAIELVENLLATYESKYDFTNRIG 1741
Query: 826 VITPYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ- 882
+I+PY Q +Q+M Q++ +I I+ ++D FQG+EKD+II+SCVR++D+
Sbjct: 1742 IISPYREQ----MQNMRNQFRRYFGDQIRSYIDFNTIDGFQGQEKDIIIISCVRADDNST 1797
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
+GFL D RR+NVALTRAK + ++G+ K L LW +L++ KE+ L
Sbjct: 1798 SVGFLKDFRRMNVALTRAKCSLWILGHHKSLVNNKLWKHLISDAKERNCL 1847
>gi|356504807|ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 233/458 (50%), Gaps = 38/458 (8%)
Query: 498 SAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
S P +L+ SQ AV A+ + + L+ GPPGTGKT T I+ Q VK+ GS +L CA
Sbjct: 191 STPFNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKR-GSKILACAA 249
Query: 557 SNIAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNMEMNS 606
SNIAVD + E++ +K+VRV +R A+D+ V L N IR EM +
Sbjct: 250 SNIAVDNIVERLVPHRVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRK-EMKA 308
Query: 607 ELKKLLQLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
KLL+ K+ E LS + KR ++ A +L +ADVI T +GA
Sbjct: 309 LNGKLLKTKDRNTRKDIQRELRTLSKEERKRQQL----AVTDVLKSADVILTTLIGAFSK 364
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
+L F ++IDE+ QA E C +P++ G++ IL GDH QL P + +A + GL ++
Sbjct: 365 KLDSTSFDLVIIDEAAQALEIACWIPILKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRT 423
Query: 718 LFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID-FPWP 774
LFERL + L +QYRMH + + S Y ++ L ++
Sbjct: 424 LFERLAEMYGDEITSMLTIQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRT 483
Query: 775 VPDKPMLFYV-TQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
+P L + T G EE S N EA R ++ G+ P IG+ITPY
Sbjct: 484 NSTEPTLLLIDTAGCDMEEKKDEEDSTFNEGEAEVTVTHAKRLVQSGVLPSDIGIITPYA 543
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
Q L + L +++E+++VD FQGREK+ II+S VRSN + +GFL+D R
Sbjct: 544 AQVVLLKMLKNKEDQL-----KDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRR 598
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
R+NVA+TR++ ++ + + +S L+ +++E
Sbjct: 599 RMNVAVTRSRRQCCLVCDTETVSGDGFLKRLIEYFEEH 636
>gi|319957167|ref|YP_004168430.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
gi|319419571|gb|ADV46681.1| DNA helicase [Nitratifractor salsuginis DSM 16511]
Length = 733
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/485 (32%), Positives = 238/485 (49%), Gaps = 74/485 (15%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN Q+ A++ ++ L LI GPPGTGKT T+ T V Q G +L A SN+AVD
Sbjct: 245 LNEPQLEALRRSLGMEELFLIHGPPGTGKT-TTLTRVIQAHASKGMHILATADSNVAVDN 303
Query: 564 LTEKIHRTG-LKVVRVCAKSREAIDSPVSFLALHNQ---------IRNMEMNSELK---- 609
L EK+ G L+++RV +R IDS + +L Q IR ++ +E
Sbjct: 304 LLEKLAGDGDLRLIRVGHPAR--IDSSLERFSLMRQLTEAPEYQEIRELQRQAETAARER 361
Query: 610 -----------------KLLQLKEE------------------TGELSSADE--KRYRML 632
++L+L +E E S +E +R R L
Sbjct: 362 ARYSKPTPARLRGMSRDRVLKLAKEGRSSRGVSAETIRSMARWIEEDSKTEEAFERLRSL 421
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLI 692
+ LL+ ADV+ T G L + F ++DE Q EP ++P +L A + +
Sbjct: 422 ESATISRLLEAADVVLATNSMVGSDALEGMSFDLAVVDEGSQQIEPSTLLP-LLRAPRGV 480
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFY 751
L GDH QL P V+ L +SLFERL+ + P L VQYRMH + FP+ Y
Sbjct: 481 LAGDHRQLPPTVLSDLEI---LKRSLFERLISRKLVPATMLRVQYRMHETIMDFPNRLMY 537
Query: 752 EGSLQNGVCADERKL---SKIDFPWPVPDKPMLFYVT---QGQEEIAGSGTSYVNRTEAS 805
+G+L R L + P P P++F T + E + TSY N TEA
Sbjct: 538 DGALVADPSVARRTLPVEKPPEDPCLDPSFPVVFADTSEMEASEHLPERSTSYENPTEAG 597
Query: 806 NVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
++ + T + CG+ P QIG+ITPY Q L + ++ + ++EV SVD FQG
Sbjct: 598 HLLRWVTELVACGIAPAQIGIITPYLAQVKLLRRLLEE--------FPDVEVKSVDGFQG 649
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
REK++I++S VRSN Q +GF++DPRRLNVA+TRA+ +++IG+ L + L +
Sbjct: 650 REKEVILISFVRSNLAQSVGFVSDPRRLNVAMTRARSKLLMIGDRSTLEPNEPFGKLFEW 709
Query: 926 YKEQK 930
+ ++
Sbjct: 710 LESRE 714
>gi|341582257|ref|YP_004762749.1| DNA helicase [Thermococcus sp. 4557]
gi|340809915|gb|AEK73072.1| DNA helicase, putative [Thermococcus sp. 4557]
Length = 710
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 245/497 (49%), Gaps = 82/497 (16%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV A+ P LI GP GTGKT T A ++ Q V++ G+ VL A SN+AVD
Sbjct: 173 LNASQRRAVAKALGSPDFFLIHGPFGTGKTRTLAELIRQEVER-GNRVLATAESNVAVDN 231
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL------LQLKEE 617
L E++ +GLKVVRV SR + + L I E+ EL++L L K +
Sbjct: 232 LVERLVDSGLKVVRVGHPSR--VSRSLHETTLAYLITRHELYGELRELRVIGQNLAEKRD 289
Query: 618 TGELSSADEKR---------------------YRMLKKNAE------------------- 637
T S +R R++++ AE
Sbjct: 290 TFTKPSPKYRRGLSDKEILRLASKGIGTRGVPARLIREMAEWIKINRQVQKTFDDARKLE 349
Query: 638 ----KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ ++ ADV+ T AG + + +IDE+ QAT P ++P I AK+ +L
Sbjct: 350 ERIAREIIREADVVLTTNSSAGLDVVDYGSYDVAIIDEATQATIPSVLIP-INRAKRFVL 408
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYE 752
GDH QL P ++ +KA G +LFE L+ + L VQYRM+ L +FPS FY
Sbjct: 409 AGDHKQLPPTILSEKAKELG--NTLFEGLIERYPGKSEMLTVQYRMNERLMEFPSREFYG 466
Query: 753 GSLQNGVCADERKLSKIDFPWPV----------PDKPMLFYVTQGQE---EIAGSGT-SY 798
G ++ L+ + P P+ ++F T G+E E G+ S
Sbjct: 467 GRIEADESIRAITLADLGVKSPACDGLWNEVLRPENVLVFVDTSGREDRFERQRYGSESR 526
Query: 799 VNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVA 858
N EA V+++ + + G+ PE IGVITPY+ QR + + LP +E+EV
Sbjct: 527 ENPLEARLVKEVVEKLLELGLNPEWIGVITPYDDQRDLI------RSLLP----EEVEVK 576
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
+VD +QGREK++I++S VRSN +GFL D RRLNV+LTRAK +I+IG+ LS P
Sbjct: 577 TVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSVHPT 636
Query: 919 WNNLLNFYKEQKVLVEG 935
+ L+ F E++ +V+
Sbjct: 637 YKRLVEFVSERETVVDA 653
>gi|145505511|ref|XP_001438722.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405894|emb|CAK71325.1| unnamed protein product [Paramecium tetraurelia]
Length = 743
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/478 (32%), Positives = 235/478 (49%), Gaps = 43/478 (8%)
Query: 475 IYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKT 533
I L G +++ + + F + LN Q AV+ A+ +P +SLI GPPGTGKT
Sbjct: 186 IIQILFGDQDEKMKEKINQNMEFQGDTIKQLNDQQKIAVQKAMNQPHISLIHGPPGTGKT 245
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR-TGLKVVRVCAKSREAIDSPVSF 592
T + Q V +L CA SNIAVD + E+I + LKV R+ +R + V +
Sbjct: 246 RTVCEYIKQAVLVQRHKILACANSNIAVDNMIERIQNISQLKVCRIGNPAR--MTDQVRY 303
Query: 593 LALHNQIRNMEMNSELKKL------LQLKEETGELSSADEKRYRMLKKNAE--------- 637
+ + ++ + +K + ++ K E A E R ++ +K E
Sbjct: 304 VCIDQLVKKTTSYAIMKTIKTEIQQIEKKLNRAERREAAELRDKLKQKKKEYFEQQQLAY 363
Query: 638 KSLLDNADVICCTCVGAGDPRLLK----IKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ + + VI T VG+G + + IKF ++IDE Q+ E C +P++ G K ++L
Sbjct: 364 EEAIQDCQVIFSTNVGSGQFQFQQLTKNIKFDVVVIDECAQSLEISCWIPILKGNK-VVL 422
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
GDHCQL P V K GL +LFER+ L VQYRM+ + ++ S FY+G
Sbjct: 423 AGDHCQLPPTV---KTKNTGLEMTLFERVENELHVNILLTVQYRMNKSIMQWSSQEFYDG 479
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA---GSGTSYVNRTEASNVEKI 810
L R +S D D + Q QE + S N EA V+ I
Sbjct: 480 HLVADQTVANRTVS--DTILLFVDTSCCDFYEQQQESLLYFDDQNKSKYNVGEAGLVQII 537
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
+ I G++ + IG+ITPY Q L +KI +IE+++VD FQGREKD
Sbjct: 538 SEELINLGVQKQDIGIITPYNAQVQLL----------KSKI-NDIEISTVDGFQGREKDC 586
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
II+S VRSN +GFL + RR+NVA+TRAK + +IG+ + +S L++++ E
Sbjct: 587 IIISMVRSNQMGEVGFLCESRRMNVAVTRAKKFVCLIGDSETVSNDAFLKRLIDYFVE 644
>gi|260831591|ref|XP_002610742.1| hypothetical protein BRAFLDRAFT_90929 [Branchiostoma floridae]
gi|229296110|gb|EEN66752.1| hypothetical protein BRAFLDRAFT_90929 [Branchiostoma floridae]
Length = 3820
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 238/510 (46%), Gaps = 80/510 (15%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS---------- 549
P LN+ Q AVK AI +P +LIQGPPGTGKTVT I Y L +
Sbjct: 3281 PAFFPLNQVQELAVKQAISQPFTLIQGPPGTGKTVTGVHIAYFLAEMNKRIQSVSGEGMY 3340
Query: 550 --PVLVCAPSNIAVDQLTEKIHRT--GLKVVRVCAKSREAIDSPVSFLALH--------- 596
VL C PSN AVD +T + + GLK+VR+ ++ E + P+ +H
Sbjct: 3341 PPQVLYCGPSNKAVDVVTGYMKKIKGGLKIVRMYSEMIEREEFPIPNEPVHPNKCKSEKE 3400
Query: 597 NQIRNMEMNSELKKLLQ----------------LKEETGELSSADEKRYRMLKKNAEKSL 640
++I N + L L++ K+ ++ D Y+ A+
Sbjct: 3401 SKITNEHDDVSLHHLIRKPSNPHAETIKAFESLFKDPNYTVTENDITTYKNHIIKAKIHE 3460
Query: 641 LDNADVICCTCVGAGDPRL-LKIKFHSILIDESMQATEPECMVPVILGA----------- 688
L VI CTC A P++ + ++DE TEPE VP++ GA
Sbjct: 3461 LRQKHVILCTCTAAASPKMGMATNIEQCIVDECGMCTEPESFVPIV-GAPVERNGSMTFH 3519
Query: 689 --KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
KQ+IL+GDH QL P+V+ K + + GL SLF+R + L +QYRMH + FP
Sbjct: 3520 NPKQVILIGDHQQLRPIVLEKTSQQLGLDTSLFQRY---AWKATMLTIQYRMHEAICSFP 3576
Query: 747 SNFFYEGSLQNGVCADER-KLSKIDFPWPVPD-KPMLFYVTQGQEEI------AGSGTSY 798
S FYE L+ ER + +D WP D +P F G+EE+ G+ S
Sbjct: 3577 SRMFYENKLRTHRTVIERPRHPALDRLWPGGDNRPTAFCHVVGKEEVQTVATAEGNQMSR 3636
Query: 799 VNRTEASNVEKITTRFIR-CGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPAKIYQEIE 856
N EA K+ +R G+KPE + +++ Y Q A + + + + L + + +
Sbjct: 3637 SNEMEADMAVKMAICLVREHGIKPENVILLSQYRAQCALINKKLSSERKRLNDERVERVG 3696
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGI-------------GFLNDPRRLNVALTRAKYG 903
V SV + QG E D +I S VRS I GF+ D ++NVA+TRAK G
Sbjct: 3697 VNSVVSSQGSEWDYVIFSTVRSLPSYEIEQNPSPSWLRKYLGFIMDQNQVNVAITRAKRG 3756
Query: 904 IIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
+ VIGN +L LWN L+ Y+EQK LV
Sbjct: 3757 LCVIGNKNLLRVHTLWNKLIIHYEEQKCLV 3786
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 229/560 (40%), Gaps = 103/560 (18%)
Query: 423 DEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 482
D + L+L S + ++G + +F + +R+ FAVD+ + I+
Sbjct: 1541 DVIYLQLSSRCCQDLDLSSGTTEEFEVR-FQLNRLHFCYMHFAVDNMAALHAIFPSRA-- 1597
Query: 483 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATIV 540
++ V LP+ L R+ V + I P ++ GP GTGKT T A+
Sbjct: 1598 DMSWVSVTESLPRQVQDTQLNARQRTAVARIMSRIGDTNPPVVLYGPFGTGKTRTMASAA 1657
Query: 541 YQLVKQTGSPVLVCAPSNIAVD-QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI 599
Q+++Q G+ VL+ SN A D + + IH V + EA V F
Sbjct: 1658 LQILQQPGTNVLIATHSNSAADLYIKDYIH------TYVTSGHPEATPLRVYF------- 1704
Query: 600 RNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVI----CCTCVGAG 655
KE E ++Y L N E + D I A
Sbjct: 1705 ---------------KERRLETVHETVRQYCKLDPNKESFAMPQMDDIMSHRIVIVTLAT 1749
Query: 656 DPRLLKI-----KFHSILIDESMQATEPECMVPVILG--AKQLILVGDHCQLGPVVMCKK 708
L+++ F IL+DE+ QA E E ++P+ L +++L GDH Q+ P V +
Sbjct: 1750 SMYLIRMGIRRGHFTHILLDEAAQAMECETILPLCLADSTTRIVLSGDHKQMSPKVHSTE 1809
Query: 709 AARAGLSQSLFERLVVLGIR-------------PF--RLEVQYRMHPELSKFPSNFFYEG 753
A +SL ER+V I PF L+ YR E+ +F S FY G
Sbjct: 1810 ACDFSFDKSLLERMVQRYIEFGKAKGTTEKAENPFLVMLKDNYRCCEEILRFLSESFYGG 1869
Query: 754 SLQNGVCADERKLSKIDFP-WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITT 812
+ + + +P W P+ F+ +G ++ TS+ N E V +IT
Sbjct: 1870 L---------KSMGQPRYPRW----YPLTFFSAEGDDKTGDYSTSFFNMAE---VLEITE 1913
Query: 813 RFIRCGMK-PEQ--------IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
R + PE+ IGVITPY Q + + ++ K + V V
Sbjct: 1914 RVQQLWKDWPEEWGPPNMADIGVITPYHNQMQLIRKELR------QKRMGGVTVEMVTNI 1967
Query: 864 QGREKDLIIMSCVRS-------NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK- 915
QG++ + +S VR+ ND GFL+D + LN A+TRA+ + VIG+P+ L
Sbjct: 1968 QGKQFRAVFISTVRTRATCDPNNDKNSYGFLSDSKLLNTAMTRAQSLVAVIGDPRALCSR 2027
Query: 916 ---QPLWNNLLNFYKEQKVL 932
Q +W ++ ++ K L
Sbjct: 2028 GECQRVWQRFISECEKNKSL 2047
>gi|66824331|ref|XP_645520.1| AN1-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|60473615|gb|EAL71556.1| AN1-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 1024
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/459 (33%), Positives = 233/459 (50%), Gaps = 45/459 (9%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN+SQ A+ ++ ++ I GPPGTGKT T + QL+K +G VL C PSN++VD
Sbjct: 235 LNQSQKEAILFSLSSNDVACIHGPPGTGKTTTVVEFIVQLIK-SGKKVLACGPSNLSVDN 293
Query: 564 LTEKIHRTG---------LKVVRVCAKSR-------EAIDSPVSFLALHNQIRNM--EMN 605
+ EK+ + R+ +R +D I+ + E+
Sbjct: 294 MLEKLLEYSNSSSCNGFLINATRIGHPTRILPQLLKHTLDHKTKNSEGGQIIKGIKDEIK 353
Query: 606 SELKKLLQLKEET-GELSSADEKRYRMLKKNAEKSL----LDNADVICCTCVGAGDPRLL 660
S K+LL++K+ + + + K R+ KN EKSL +++++VI T GA D L
Sbjct: 354 SLSKQLLKVKQHSERRVIQSSIKELRIDLKNREKSLIQQVINDSNVILSTNTGASDSSLK 413
Query: 661 KI-KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
I F ++IDE QA E C +P+ G K L+L GDH QL P + +AA+ GLS +LF
Sbjct: 414 GIDNFDWVVIDECAQALEASCWIPIQKGNK-LLLAGDHQQLPPTIHSMEAAKMGLSITLF 472
Query: 720 ERLVV-LGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP----W 773
ER++ G + R L VQYRM+ ++ + S FY + L D P
Sbjct: 473 ERIIKQYGDQVSRLLNVQYRMNHKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNT 532
Query: 774 PVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
P+L T G +E G S N E V++ + I CG+KP IGVITPY
Sbjct: 533 LTTTCPLLMIDTSGCDMEESQDDEGESKFNNGEVIVVKRHIEKLIECGVKPNDIGVITPY 592
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH--QGIGFLN 888
GQ L ++ +K Y +E+ +VD FQGREKD+II+S VRSN +GFL
Sbjct: 593 NGQVKLLKSYL-------SKKYSSMEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLT 645
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+ RR NVA+TRA+ ++V+ + +S +++++K
Sbjct: 646 EDRRTNVAITRARKHVVVVCDTDTISSHEPLKRMVDYFK 684
>gi|378756208|gb|EHY66233.1| hypothetical protein NERG_00929 [Nematocida sp. 1 ERTm2]
Length = 788
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 226/433 (52%), Gaps = 57/433 (13%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN +Q AV ++ +PL+LIQGPPGTGKT T + ++ Q + Q G VLVCAPSN+AV +L
Sbjct: 252 LNEAQRNAVIMSLNQPLTLIQGPPGTGKTQTISCMISQFI-QRGMQVLVCAPSNMAVFKL 310
Query: 565 TEKIH------RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSEL--KKLLQLKE 616
E H + K V + +K E D S + R E N ++ KK +
Sbjct: 311 VENRHMWEHFFKNKKKWVHIHSKKPEKSDGEES-----TRKRKDESNRKIRPKKRIITGN 365
Query: 617 ETGELSS--ADEKRYRMLKKNAEKSLLDNA----DVICCTCVGAGDPRLLKIKFHSILID 670
G DE Y +L+D+A ++ CT A + K +FH +++D
Sbjct: 366 SLGIQKDLIIDETDY-----TKSAALIDDAMAGASLVFCTLSMAASTAVSKKEFHVVIVD 420
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF 730
E Q+ EP ++P+ ++L+LVGD QL P + + LS SLFERL I P
Sbjct: 421 EVCQSIEPSSIIPLQNSVRRLVLVGDPKQLPPTIF---SESNDLSVSLFERLAE-TITPL 476
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE 790
L+ QYRMH ++S FP+ FY G L +GV + PM T G+++
Sbjct: 477 ILDTQYRMHSDISCFPNKTFYAGKLIDGVVLESIV-------------PMALVDTGGEQK 523
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
+ TS N E +E + + K + I +ITPY+ Q L + +
Sbjct: 524 --RNRTSLYNPREIDFIEDLLPYIMD---KYKSIAIITPYKEQSIRLSVNRKI------- 571
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
I ++I V++VD FQG+EKD II+S VR+N GIGFLND RR+NVALTRAKY +I++G
Sbjct: 572 INRQITVSTVDGFQGQEKDCIIVSTVRTN---GIGFLNDYRRMNVALTRAKYTVIILGCV 628
Query: 911 KVLSKQPLWNNLL 923
++L K +W L+
Sbjct: 629 RLLEKDKIWKQLV 641
>gi|159464225|ref|XP_001690342.1| hypothetical protein CHLREDRAFT_127992 [Chlamydomonas reinhardtii]
gi|158279842|gb|EDP05601.1| predicted protein [Chlamydomonas reinhardtii]
Length = 640
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 231/449 (51%), Gaps = 37/449 (8%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
L+ SQ AV A+ + L+L+ GPPGTGKT I+ Q V + GS VL + SNIAVD
Sbjct: 186 LDDSQRQAVTLALSAKDLALVHGPPGTGKTTAVVEIILQEVAR-GSRVLAASASNIAVDN 244
Query: 564 LTEKIHRTG--LKVVRVCAKSR---EAIDSPV---------SFLALHNQIRNMEMNSELK 609
L E++ R LK+VR+ +R +DS + S LA + +N+ L
Sbjct: 245 LVERLVRANPKLKLVRMGHPARLLPAVLDSSLEAHVLRSDNSALARDCRAEIKSINARLL 304
Query: 610 KL-----LQLKEETGELSS-ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
KL + +E G+L E+R R AE ++ A V+CCT G +L K
Sbjct: 305 KLGPRDRAERRELRGDLRRLGKEERQRQEAAVAE--VIKGAQVVCCTLTGVSHRQLDKEL 362
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL- 722
F ++DE+ QA E +L A++ +L GDH QL P V+ +AAR GL+++LFERL
Sbjct: 363 FDVAVVDEAAQALEAATW-GALLRARRAVLAGDHLQLPPTVVSDEAARLGLARTLFERLQ 421
Query: 723 VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD----- 777
+ L VQYRM+ + ++ S+ Y G L E L +
Sbjct: 422 TSVPTASAMLTVQYRMNKAIMQWSSDELYHGKLTAHPSVAEHTLRDMPPDAAAGAPGAGC 481
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
K M +E+ G+SY N EA V R +R G+ P+ IG+ITPY Q A L
Sbjct: 482 KGMDTAGCGFEEQQEAEGSSYANPGEAKAVMAHVARLVRIGIPPQHIGIITPYNAQVALL 541
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
+ ++ Q + +E++SVD FQGREK+ I++S VRSND G+GFL+D RR+NVA+
Sbjct: 542 -KELRAQ-----SVGGALEISSVDGFQGREKEAILVSMVRSNDGGGVGFLSDRRRMNVAV 595
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFY 926
TRA+ V + + +S+ L+ ++
Sbjct: 596 TRARRHCAVFCDSETVSQDGFLKRLVEYF 624
>gi|363750954|ref|XP_003645694.1| hypothetical protein Ecym_3390 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889328|gb|AET38877.1| Hypothetical protein Ecym_3390 [Eremothecium cymbalariae
DBVPG#7215]
Length = 663
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 260/514 (50%), Gaps = 69/514 (13%)
Query: 451 STSFDRMQLALRKFA----VDDQSVSAYIY-HRLLGHNVDEVLFRCHLPKHFSAPNLPDL 505
S ++ RMQ +RK A + S+ Y+ R D + H +L
Sbjct: 142 SITYKRMQSTMRKLAEIEGTPNNSIIQYLLCQRQFVEQKDSIEISFHNQ---------NL 192
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLT 565
N SQ A+K A+Q +S+I GPPGTGKT T ++ QLVKQ G +L+C PSNI+VD +
Sbjct: 193 NDSQKKAIKFALQNEISIIHGPPGTGKTYTLVELIMQLVKQ-GQRILICGPSNISVDTIL 251
Query: 566 EKIHRT--GLKVVRVCAKSR-------EAIDSPVSFLALHNQIR--NMEMNSELKKLLQL 614
E++ + G ++R +R +ID + IR N E+N+ L ++ +
Sbjct: 252 ERLAKVIPGNLLLRFGHPARLLPSTLAHSIDVISKSGDAGSIIRDINQEINNHLLQIKKF 311
Query: 615 KEETGELSSADE-----KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------ 663
K + E K + ++ L+ A V+ CT G+ L ++
Sbjct: 312 KSYRDRKKAWQEIKDLRKELKQRERRVISELILAAKVVVCTLHGSSSGNLCRVYDFEPKL 371
Query: 664 FHSILIDESMQATEPECMVPVILGAK----QLILVGDHCQLGPVVMCK--KAARAGLSQS 717
F++++IDE Q+ EP+C +P+I K +L++ GD+ QL P + + + + L +
Sbjct: 372 FNTLIIDEVSQSLEPQCWIPLISHYKSNISKLVIAGDNKQLPPTIKTEDDEKVKKILGTT 431
Query: 718 LFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADE-RKLSKIDFPWP 774
+F++L F+ L VQYRM+ ++ +FPS+ Y+ L + A+ K++ D P
Sbjct: 432 IFDKLENHYGNDFKKLLNVQYRMNEQIMEFPSHQLYKDEL---IAAEAVAKITLADLPGV 488
Query: 775 VPDK----PMLFYVTQG------QEEIAGS---GTSYVNRTEASNVEKITTRFIRCGMKP 821
D P+L++ TQG EE+ G +S N EA + ++ + +
Sbjct: 489 EVDDNTSVPLLWFDTQGDDFLEKSEEVNGVLDIASSKYNENEAYLLIHYVSQLLNSNVSQ 548
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
E IG+I+PY Q + L + + + SL IE++SVD FQGREKD II+S VRSND
Sbjct: 549 ESIGIISPYNAQVSLLRKLVHEKYSL-------IEISSVDGFQGREKDCIILSLVRSNDL 601
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
+GFL D RRLNVA+TRAK + VIGN + L +
Sbjct: 602 FEVGFLRDERRLNVAMTRAKRQLCVIGNMETLER 635
>gi|258573219|ref|XP_002540791.1| DNA helicase [Uncinocarpus reesii 1704]
gi|237901057|gb|EEP75458.1| DNA helicase [Uncinocarpus reesii 1704]
Length = 725
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 239/482 (49%), Gaps = 68/482 (14%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ ++LI GPPGTGKT T ++ QLV++ +LVC PSNI+V
Sbjct: 240 PSLNDSQKAAIRFALASHEIALIHGPPGTGKTHTLIELILQLVRRN-LRILVCGPSNISV 298
Query: 562 DQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQL 614
D + E++ + +VR+ +R +D + L + ++++ E K+
Sbjct: 299 DNIVERLAPHKIPLVRIGHPARLLSSVLDHSLEVLTQTSDSAAIVKDVRREIEQKQASIR 358
Query: 615 KEETGELSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKFHSI 667
K +G K + L+K + SL+ + V+ T G+G +L KF +
Sbjct: 359 KTRSGRERREIYKDLKELRKEFREREARCVDSLVTGSKVVLATLHGSGGHQLRNQKFDVV 418
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV------MCKKAAR---------A 712
LIDE+ QA E +C VP +L A + IL GDH QL P + + AA+ A
Sbjct: 419 LIDEASQALEAQCWVP-LLSASKAILAGDHLQLPPTIKSVTTKISSSAAKPKSFEEDHHA 477
Query: 713 GLSQS----------LFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
LS S LF+RL+ L + L QYRMH ++ FPS+ YE L +
Sbjct: 478 DLSMSKLSIETLETTLFDRLLSLHGADIKRMLTTQYRMHEKIMSFPSSELYESRL---IA 534
Query: 761 ADERKLSKI-DFPWPVPD-----KPMLFYVTQGQEEIAGS-------GTSYVNRTEASNV 807
AD K + D P+ V D +P++FY TQG E + S N E + V
Sbjct: 535 ADHVKARLLRDLPYEVQDTDDTREPLVFYDTQGDEFPERTEEAELLLADSKSNDLEGAIV 594
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
+ I G+ E I VITPY Q A L Q ++ + Y +E+ SVD FQGRE
Sbjct: 595 ARHVGNLIAAGVVEEDIAVITPYNAQVALLAQLLKEK-------YPGLEIGSVDGFQGRE 647
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFY 926
K+ +++S VRSN + +GFL + RRLNVA+TR + + V G+ + +S+ P + F
Sbjct: 648 KEAVVVSLVRSNPEREVGFLGEKRRLNVAMTRPRRHLCVCGDSETISRGSPFLKRWMEFL 707
Query: 927 KE 928
+E
Sbjct: 708 EE 709
>gi|356570496|ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/452 (33%), Positives = 232/452 (51%), Gaps = 38/452 (8%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+L+ SQ AV A+ + + L+ GPPGTGKT T I+ Q VK+ GS +L CA SNIAVD
Sbjct: 197 NLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVD 255
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNMEMNSELKKLL 612
+ E++ +K+VR+ +R A+D+ V L N IR EM + KLL
Sbjct: 256 NIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRK-EMKALNGKLL 314
Query: 613 QLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ K+ E LS + KR ++ A +L +ADVI T +GA +L
Sbjct: 315 KTKDRNTRKDIQRELRTLSKEERKRQQL----AVTDVLKSADVILTTLIGAFSKKLDSTS 370
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA E C +P++ G++ +L GDH QL P + +A + GL ++LFERL
Sbjct: 371 FDLVIIDEAAQALEIACWIPLLKGSR-CVLAGDHLQLPPTIQSVEAEKKGLGRTLFERLA 429
Query: 724 -VLGIR-PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID-FPWPVPDKPM 780
V G L VQYRMH + + S Y ++ L ++ +P
Sbjct: 430 EVYGDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTTSTEPT 489
Query: 781 LFYV-TQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
L + T G EE S N EA R ++ G+ P IG+ITPY Q L
Sbjct: 490 LLLIDTAGCDMEEKKDEEDSTFNEGEAEVTVAHAKRLVQSGVIPSDIGIITPYAAQVVLL 549
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
+ L +++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+
Sbjct: 550 KMLKNKEDRL-----KDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAV 604
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
TR++ ++ + + +S L+ +++E
Sbjct: 605 TRSRRQCCLVSDTETVSGDGFLKRLIEYFEEH 636
>gi|423302630|ref|ZP_17280652.1| hypothetical protein HMPREF1057_03793 [Bacteroides finegoldii
CL09T03C10]
gi|408470506|gb|EKJ89040.1| hypothetical protein HMPREF1057_03793 [Bacteroides finegoldii
CL09T03C10]
Length = 628
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 261/527 (49%), Gaps = 51/527 (9%)
Query: 433 AGAPTEATTG--FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 490
AGA TE T V + TS+ M AL + A + LLG + FR
Sbjct: 122 AGALTELQTDGVLGVQLYFDETSYRAMFEALEDVIRAKGNRLAELRDTLLG--TLKPGFR 179
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P F P LN +Q AV + R +S++ GPPGTGKT T +Y+ + +
Sbjct: 180 ELYPVRF-----PWLNSTQETAVNKVLCARDVSIVHGPPGTGKTTTLVEAIYETLHREPQ 234
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------A 594
V+VC SN AVD + EK+ G+ V+R+ +R D +SF
Sbjct: 235 -VMVCTQSNTAVDWICEKLVDRGVPVLRIGNPTR-VNDKMLSFTYERRFESHPAYPELWG 292
Query: 595 LHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCV 652
+ IR EM +++ +E G S R R L+ L D+A VI T V
Sbjct: 293 IRKSIR--EMGGRMRRG-SYEEREGMRSRMSRLRDRATELEIQINADLFDSARVIASTLV 349
Query: 653 GAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
+ L +F ++ IDE+ QA E C + I +++L GDHCQL P + C +AAR
Sbjct: 350 SSNHRLLNGRRFPTLFIDEAAQALEAACWI-AIRKTDRVVLAGDHCQLPPTIKCIEAARG 408
Query: 713 GLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
GL +L E++V L +VQYRM+ + +FPS++FY+G L+ + R +DF
Sbjct: 409 GLEYTLMEKVVRQKPSSVSLLKVQYRMNEAIMQFPSDWFYQGELE--AAPEVRYRGILDF 466
Query: 772 PWPVPDKPMLFYVT---QGQEEIAGSGTSYVNRTEASNVEKITTRFI-RCGMK---PEQI 824
D PM + T + EE G +N+ EA+ + + +I R G + E+I
Sbjct: 467 -----DSPMSWIDTSEMEFHEEFIGESFGRINKQEANLLLEELEAYINRIGKERILEERI 521
Query: 825 --GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
G+I+PY+ Q +L ++ S + I V +VD FQG+E+D++ +S VR+N+
Sbjct: 522 DFGLISPYKAQVQYLRSKIK-GSSFLRPLRSLITVNTVDGFQGQERDVVFISLVRANEEG 580
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
IGFLND RR+NVA+TRA+ ++++G L+K P + L+ F K++
Sbjct: 581 QIGFLNDLRRMNVAITRARMKLVILGEAATLTKHPFYKRLMAFIKKE 627
>gi|432861602|ref|XP_004069646.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Oryzias latipes]
Length = 987
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 243/480 (50%), Gaps = 50/480 (10%)
Query: 483 NVDEVLFRCHLPKHFSAPNL---PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSAT 538
N+ VLF P S P +L+ SQ AV A+ QR L++I GPPGTGKT T
Sbjct: 163 NIINVLFGNAQPSSHSQPIQFFNSNLDDSQREAVMFALSQRELAVIHGPPGTGKTTTVVE 222
Query: 539 IVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--EAIDSPVSFLALH 596
I+ Q VKQ G VL CAPSN+AVD L E++ + KV+R+ +R E+I S A+
Sbjct: 223 IILQAVKQ-GQKVLCCAPSNVAVDNLVERLAQCKAKVLRLGHPARLLESIQKH-SLDAIL 280
Query: 597 NQIRNMEMNSELKK-----LLQLKEETGELSSAD------EKRYRMLKKNAEKSLLDNAD 645
Q N + ++++K L+ +K+E GE + +K + + A +L AD
Sbjct: 281 AQSDNANIIADIRKDIDKVLMGMKKEKGERGNYKREIGELKKELKSREATAITQILKGAD 340
Query: 646 VICCTCVGAGDPRLLKI----KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLG 701
V+ T GA D LK+ F ++IDE QA E C + +L A++ IL GD+ QL
Sbjct: 341 VVLSTNTGACDDGPLKLLPAEHFDWVVIDECAQALESSCWI-ALLKARKCILAGDYKQLP 399
Query: 702 PVVMCKKAARAGLSQSLFERLV-VLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGV 759
P + + AA GLS SL ER++ + G R L VQYRM+ + ++ S Y+G L
Sbjct: 400 PTIKSQAAASKGLSLSLMERVIQIYGDVVVRMLTVQYRMNSAIMEWASKEMYQGKLTAHC 459
Query: 760 CADERKLSKIDFPWPVPDK--PMLFYVTQGQEEIAGSGTSYV---------NRTEASNVE 808
+ L + V + P+L T AGSG + + N+ E VE
Sbjct: 460 SVESHLLKDLTGVASVAETSTPLLLIDT------AGSGLTEMEVTDEQSKGNQGEVDIVE 513
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
G+K + I VI PY Q L Q + + + E+E+ SVD FQGREK
Sbjct: 514 LHIKALTEAGVKAKDIAVIAPYNLQVDLLRQRLSAR-------HPELEIKSVDGFQGREK 566
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
+ +++S VRSN +GFL++ RR+NVA+TRA+ I V+ + + + +L++ E
Sbjct: 567 EAVVLSLVRSNRKGEVGFLSEDRRINVAVTRARRHIAVVCDTQTVQNHAFLKSLVDHMTE 626
>gi|220919450|ref|YP_002494754.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957304|gb|ACL67688.1| superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 622
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 228/467 (48%), Gaps = 59/467 (12%)
Query: 494 PKHFSAPNLP----DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT- 547
P+ AP P LN Q A+ A + L+L+ GPPGTGKT T++ +++++
Sbjct: 165 PRFLRAPRGPVLEARLNPEQQAALDLADRAEDLALVHGPPGTGKT----TVLVEVIRRAA 220
Query: 548 --GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVS 591
G VL APSN+AVD L E++ GL VRV +R EA ++
Sbjct: 221 ARGESVLAAAPSNLAVDNLVERLAAAGLACVRVGHPARVLPGLLEHTLEARVEAHEAARI 280
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR---------YRMLKKNAEKSLLD 642
L +Q + + + +K Q K G S++ E+ R L+ AE +L+
Sbjct: 281 AQGLVDQA--LALRRDARKRRQ-KRGPGRFSASREQEREARALLAEARRLEARAEAEVLE 337
Query: 643 NADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGP 702
A V+ T P L +F ++DE+ QA EP + +L A + +L GDH QL P
Sbjct: 338 RAQVVLATLTSLDAPALAGRRFALAVVDEATQAVEPAAYL-ALLRADRAVLAGDHLQLPP 396
Query: 703 VVMCKKAARAGLSQSLFERLV-VLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
V+ A GL SLFERLV G R L Q+RM+ + FPS Y G+L+
Sbjct: 397 TVLSAAAQAGGLGVSLFERLVEAHGDRARVMLAEQHRMNARIMAFPSEALYGGALRAHPA 456
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
A R + D P+ T G +EE S N EA R +
Sbjct: 457 AAGRAID---------DAPLELVDTSGRGFEEETPEGSDSKQNTGEAELAAAEVRRLLAA 507
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+ P + VI+PY+GQ VQ ++ L ++ +EV +VD FQGREK+ +++S VR
Sbjct: 508 GLAPADVAVISPYDGQ----VQRLRQL--LADEVEAGLEVDTVDGFQGREKEAVVVSLVR 561
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
SN+ +GFL D RR+NVALTRA+ ++V+G+ +S+ P + + L
Sbjct: 562 SNEAGEVGFLADVRRMNVALTRARAKLVVVGDGSTVSRHPFYRSFLE 608
>gi|410077865|ref|XP_003956514.1| hypothetical protein KAFR_0C03880 [Kazachstania africana CBS 2517]
gi|372463098|emb|CCF57379.1| hypothetical protein KAFR_0C03880 [Kazachstania africana CBS 2517]
Length = 675
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 249/509 (48%), Gaps = 61/509 (11%)
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+ ++ RM+ +RK D S I LL + F + + P+LN SQ
Sbjct: 156 TITYKRMESTMRKLQEFDSIPSNKIIQFLL----NGATFIPRVSGDTIQFHNPNLNESQR 211
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A+K +I +S+I GPPGTGKT T I+ QLVK+ G VLVC PSNIAVD + E++ +
Sbjct: 212 DAIKFSIDNEISIIHGPPGTGKTYTIIEIIQQLVKR-GERVLVCGPSNIAVDTILERLAK 270
Query: 571 T--GLKVVRVCAKSR--EA-IDSPVSFLA------------LHNQIRNMEMNSELKKLLQ 613
G ++R+ +R EA + + L+ H R + ++K +
Sbjct: 271 VLPGNLLLRIGHPARLLEANLSHSLDILSKNSDAGAIVKDIYHEIDRTISSIRKIKSYKE 330
Query: 614 LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------FHSI 667
KE E+ K R+ +K L+ A VI T G+ L I F ++
Sbjct: 331 RKEAWNEVKLL-RKELRVKEKKVIDELILGAKVIVSTLHGSSSKELCNIYNSTEKLFDTL 389
Query: 668 LIDESMQATEPECMVPVIL----GAKQLILVGDHCQLGPVVMCKKAAR--AGLSQSLFER 721
+IDE Q+ EP+C +P+I K+LIL GD+ QL P V + + + L ++LF+R
Sbjct: 390 IIDEVSQSMEPQCWIPLISHYKSNMKRLILAGDNKQLPPTVKTEDDVKIQSKLEKTLFDR 449
Query: 722 LVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK- 778
LV + FR L VQYRM+ + F S Y+G L AD+ K+ P D
Sbjct: 450 LVEIYGDQFRKLLNVQYRMNENIMTFSSVQMYDGKL----LADDSVRDKLLSDIPGVDAN 505
Query: 779 -----PMLFYVTQG-------QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
P+++Y TQG +EE + S N EA + I + IG+
Sbjct: 506 DETNLPLIWYDTQGDDFLESTEEETSTIFQSKFNENEALIAMDHVKKLIESNIPEHAIGI 565
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
I+PY Q A L + + + Y IE+++VD FQGREK++II S VRSN+ +GF
Sbjct: 566 ISPYSAQVALLKKTISDK-------YPTIEISTVDGFQGREKEVIIFSLVRSNEKFEVGF 618
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
L D RRLNVA+TR K + VIGN + L +
Sbjct: 619 LKDERRLNVAMTRPKKQLCVIGNIETLQR 647
>gi|296109905|ref|YP_003616854.1| DNA helicase [methanocaldococcus infernus ME]
gi|295434719|gb|ADG13890.1| DNA helicase [Methanocaldococcus infernus ME]
Length = 639
Score = 210 bits (534), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 263/550 (47%), Gaps = 104/550 (18%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
+D +F RM+ ALR + + + +LG E + + F +
Sbjct: 122 IDLFINDITFKRMKEALRYI----EKEKPKLINIILGIEKPEKPLKEDIEMEFYDK---E 174
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AVK AI + L LI GPPGTGKT T ++ Q VK VL A SNIA D
Sbjct: 175 LNESQKRAVKRAILSKDLYLIHGPPGTGKTRTLTEVIVQEVKFNKHKVLATADSNIAADN 234
Query: 564 LTEKIHRT--GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
+ E + + LKVVR+ +R + D L H+ +E + + +K+L+LKE+ E+
Sbjct: 235 ILEYLIKKYPFLKVVRIGHPTRISKD-----LIEHSLPYLIECHPKYQKVLKLKEKISEI 289
Query: 622 SSADEK------RYRM-------------------------------LKKNAE-KSLLDN 643
+K R+R +KKNA+ K L+D
Sbjct: 290 KEERDKFLKPSPRWRRGMSDDQILKVAKKNKDYRGVPKEKIKSMAQWIKKNAKIKVLVDK 349
Query: 644 ---------------ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
ADVI T AG L F ++IDE QA EP C++P+I G
Sbjct: 350 LEKLSKEIADEIIKEADVIVSTNSMAGSEVLKDYFFDVVVIDEGSQAMEPSCLIPIIKGE 409
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-----LEVQYRMHPELS 743
K LI+ GDH QL P V+ + L ++LFE+L I+ + LE+QYRM+ ++
Sbjct: 410 K-LIMAGDHKQLPPTVL---SDNEELKKTLFEKL----IKKYPEFSSILEIQYRMNEKIM 461
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--------PMLFYVTQGQEEIAGSG 795
+FP+ FYE L+ + ++ +D V ++ P+ F+ G+E+
Sbjct: 462 EFPNRMFYENKLKAAESV--KNITLMDLVKEVDEEDKDIINKIPVQFFHVDGEEKRDKDS 519
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
SY N EA V ++ + ++ + + VITPY+ Q L + + +G ++
Sbjct: 520 PSYYNEEEAKKVLEVVKKLVKYKI---PVSVITPYDAQVRLLRRMFEEEG-------LDV 569
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
EV +VD FQGRE + I++S VR+ + GFL D RRLNVA+TRAK +I+IGN +L K
Sbjct: 570 EVNTVDGFQGRENEAIVISFVRT---KNFGFLKDYRRLNVAITRAKRKLILIGNENLLKK 626
Query: 916 QPLWNNLLNF 925
++N +L +
Sbjct: 627 DTIYNEMLKW 636
>gi|67472499|ref|XP_652053.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56468857|gb|EAL46665.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 931
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 169/289 (58%), Gaps = 13/289 (4%)
Query: 640 LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
+L + +C T P LLK KF + ++DE+ Q+ EPE + +I ++ +L+GD Q
Sbjct: 541 ILSGIECVCSTLSLCTRPTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKTVLIGDIQQ 599
Query: 700 LGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
L P + +A AG +S+FER + I+ L+ QYRMHP +S+F + FY L+NG
Sbjct: 600 LQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENG 659
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V + +R +I +P P++F G E SGTSY N E ++++ + +
Sbjct: 660 VSSKDRFDDRIINFFPDYTNPIMFINCDGTEHYGSSGTSYNNAGEVQIIQEVVEKLLNND 719
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
++ +IG+I+PY+ Q+ + Q++ +I+VA++D FQG EK+ II SCVRS
Sbjct: 720 IEENEIGIISPYQAQQELISQYVS----------TKIKVANIDGFQGNEKEYIIFSCVRS 769
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN-FY 926
N G+GF+ND +RLNVAL RAK G+I+IGN + L +WN L++ FY
Sbjct: 770 NQTLGVGFVNDYKRLNVALKRAKSGLIIIGNIQTLITSKVWNMLIHQFY 818
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 440 TTGFSVDFIW--KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL-FRCHLPKH 496
T+ F + F+ K F R L+ +D+ H+ E++ + +
Sbjct: 244 TSLFRIYFLTNDKGNPFIRTLDVLQSREIDEYYSKILCCHKKQSTKTKEIITYEEMSAEK 303
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL---------VKQT 547
++ PNL +LN Q A+ +A+ +SL+ GPPGTGKT + +I L + +
Sbjct: 304 YNIPNLSNLNDYQRKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLIYNKRRFYNINRG 363
Query: 548 GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE 607
+LVCA SN AVD + K+ G+ VRV A + F ++IR NS
Sbjct: 364 EKKLLVCASSNNAVDVICSKLIEKGVPTVRVVADEQ--------FENCSDKIRE---NSL 412
Query: 608 LKKLLQLKEETG 619
LKK ++ E G
Sbjct: 413 LKKAIEFTERRG 424
>gi|302308150|ref|NP_984975.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|299789319|gb|AAS52799.2| AER115Wp [Ashbya gossypii ATCC 10895]
gi|374108198|gb|AEY97105.1| FAER115Wp [Ashbya gossypii FDAG1]
Length = 2027
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 260/530 (49%), Gaps = 113/530 (21%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ AV ++++ SLIQGPPGTGKT T +V + L P
Sbjct: 1307 LNTSQAKAVISSVKKLGFSLIQGPPGTGKTKTILGVVGFFLTTAKALPSNVIRNPTESNA 1366
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSP 589
VL+CAPSN AVD+L ++ R GL K+VR+ KS +A+++
Sbjct: 1367 TSTEMLLQKQKVLICAPSNAAVDELVLRL-REGLVDTDGKLFKPKLVRI-GKS-DAVNAA 1423
Query: 590 VSFLAL-------------------------------HNQIRNMEMNSE----------- 607
+ L L ++R+M MN E
Sbjct: 1424 IRDLTLEELVDKRALNQSYEINHDPNLDQSFHDAVAERRKLRDM-MNKEDGSPTSKLSTD 1482
Query: 608 ------------LKKLLQLKEETGELSSADEKRYR---MLKKNAEKSLLDNADVICCTCV 652
KK+ +L ++ EL + YR + K+ A+ +L +D+IC T
Sbjct: 1483 EISKIQLKLRDLSKKINELGKQRDELRERNAVNYRNRELNKRKAQARILAESDIICSTLS 1542
Query: 653 GAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
G+ L L +KF ++++DE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1543 GSAHDVLASLGVKFDTVIVDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAAS 1602
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
+QSLF R+ +P L+VQYRMH +S FPS FY+G L+NG D+
Sbjct: 1603 NFKYNQSLFVRMEK-NCKPHLLDVQYRMHSMISAFPSLEFYDGRLKNGPNMDQVNTR--- 1658
Query: 771 FPW--PVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEA----SNVEKITTRFIRCGMKPEQ 823
PW P P F+ + G+++ SYVN E ++K+ +++ + +
Sbjct: 1659 -PWHESQPFGPYRFFDIITGKQQQNAKTMSYVNYDECQVSIEMIDKLLSQYEKKVDFSGK 1717
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ- 882
IG+I+PY Q + + ++ I++ I+ ++D FQG+EK++II+SCVR++D +
Sbjct: 1718 IGIISPYREQMQMMKR--AFRSYFGGTIFKYIDFNTIDGFQGQEKEIIIISCVRADDSKG 1775
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
G+GFL D RR+NVALTRAK + ++G+ K L K LW +L++ K + L
Sbjct: 1776 GVGFLKDFRRMNVALTRAKASLWILGHHKSLYKNKLWMHLISDAKGRDCL 1825
>gi|407920626|gb|EKG13814.1| hypothetical protein MPH_09028 [Macrophomina phaseolina MS6]
Length = 1990
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 255/552 (46%), Gaps = 110/552 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV----KQTGSPV------- 551
+LNR+Q AVK AI +LIQGPPG+GKT T IV L+ K G V
Sbjct: 1281 NLNRAQAKAVKSAIDNDAFTLIQGPPGSGKTKTIVAIVGALLTDSLKSGGGTVISTPAGM 1340
Query: 552 ---------------LVCAPSNIAVDQLT----EKIHRTG-----LKVVRVCAKSREAID 587
LVCAPSN AVD+L E I T + VVR+ +A++
Sbjct: 1341 NNAAVRNNLPAPKKLLVCAPSNAAVDELVMRFKEGIKTTSGQHKKISVVRLGRS--DAMN 1398
Query: 588 SPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL-------------------------- 621
+ V + L +++ N +N ++ +EETG++
Sbjct: 1399 ANVKDVTL-DELVNARLNINPEQNGDQREETGKVMKEHQAVSERLRNAREKLDSGEVKGD 1457
Query: 622 --------------------SSADEKRYR---------MLKKNAEKSLLDNADVICCTCV 652
S DE + R + +K A++++LD + VIC T
Sbjct: 1458 ELSRLKDEFDILRRQKAQLSSKIDECKDREASQGRMADLNRKRAQQAILDESHVICATLS 1517
Query: 653 GAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
G+G L I+F ++++DE+ Q E ++P+ G + ILVGD QL P V K+AA
Sbjct: 1518 GSGHEMFQNLNIEFETVVVDEAAQCVEMSALIPLKYGCAKAILVGDPKQLPPTVFSKEAA 1577
Query: 711 RAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
R QSLF R+ L + QYRMHPE+S FPS FY+G L +G AD L
Sbjct: 1578 RFQYEQSLFVRMQTNHPNDVHLLDTQYRMHPEISYFPSQTFYDGRLLDG--ADMAALR-- 1633
Query: 770 DFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKP----EQ 823
+ PW P F+ QGQ + A G S +N E + +R + +
Sbjct: 1634 EKPWHSSTLLAPYRFFDVQGQHQSAPKGHSLINIAEIDVAMALYSRLMNDFKDSVDLRGK 1693
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
IG+ITPY+ Q L Q +++ +E + DA+QGRE ++II SCVR++ G
Sbjct: 1694 IGIITPYKSQLRELKDRFARQYG--DTVFEYVEFNTTDAYQGRESEIIIFSCVRASPAGG 1751
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN-LKE 942
IGFL D RR+NV LTRAK + V+GN + L + W L+ ++++ G + L++
Sbjct: 1752 IGFLQDIRRMNVGLTRAKSSLWVLGNSQSLMRGQFWKLLVEDAQKRERYTTGDVRGMLRK 1811
Query: 943 SLILFSKPKQYF 954
F PK +
Sbjct: 1812 HSSAFPAPKGAY 1823
>gi|357163471|ref|XP_003579742.1| PREDICTED: probable helicase DDB_G0274399-like isoform 2
[Brachypodium distachyon]
Length = 820
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 208/399 (52%), Gaps = 48/399 (12%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ H+ ++
Sbjct: 374 VLVCAPSNSALDEIVSRVLQTGIRDENNNTYSPKIVRIGLKA-------------HHSVK 420
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
+ M+ L+Q K + SS +R S+LD A ++ T +G
Sbjct: 421 AVSMDY----LIQQKLSGVDRSSDGGRRGAGEYDRIRASVLDEAAIVFSTLSFSGSTVFS 476
Query: 661 KI--KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
++ F ++IDE+ QA EP +VP++ G +Q+ LVGD QL V+ A + G SL
Sbjct: 477 RMTRSFDVVIIDEAAQAVEPATLVPLVHGCRQVFLVGDPVQLPATVISSTAQKLGYGTSL 536
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
F+R G L++QYRMHPE+S FPS FYEG LQ+G ++++ PW
Sbjct: 537 FKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEGLNKKR------PWHSYSC 590
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PE-----QIGVITPY 830
P F+ G E S+VN E VE IT + + PE Q+ VI+PY
Sbjct: 591 FGPFCFFDIDGIESQPSGSGSWVNEDE---VEFITLIYHQLATHYPELKSSSQVAVISPY 647
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L +++ + + + I+V +VD FQGREK+++I SCVR N Q IGF++D
Sbjct: 648 SLQVKLLKD--RFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDF 705
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
RR+NVA+TRA+ ++VIG+ L + WNNL+ KE+
Sbjct: 706 RRMNVAITRARSAVLVIGSASTLKQDKHWNNLVESAKER 744
>gi|357163474|ref|XP_003579743.1| PREDICTED: probable helicase DDB_G0274399-like isoform 3
[Brachypodium distachyon]
Length = 780
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 208/399 (52%), Gaps = 48/399 (12%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
VLVCAPSN A+D++ ++ +TG+ K+VR+ K+ H+ ++
Sbjct: 334 VLVCAPSNSALDEIVSRVLQTGIRDENNNTYSPKIVRIGLKA-------------HHSVK 380
Query: 601 NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
+ M+ L+Q K + SS +R S+LD A ++ T +G
Sbjct: 381 AVSMD----YLIQQKLSGVDRSSDGGRRGAGEYDRIRASVLDEAAIVFSTLSFSGSTVFS 436
Query: 661 KI--KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
++ F ++IDE+ QA EP +VP++ G +Q+ LVGD QL V+ A + G SL
Sbjct: 437 RMTRSFDVVIIDEAAQAVEPATLVPLVHGCRQVFLVGDPVQLPATVISSTAQKLGYGTSL 496
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD- 777
F+R G L++QYRMHPE+S FPS FYEG LQ+G ++++ PW
Sbjct: 497 FKRFQAAGFPVQMLKIQYRMHPEISIFPSKEFYEGILQDGEGLNKKR------PWHSYSC 550
Query: 778 -KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PE-----QIGVITPY 830
P F+ G E S+VN E VE IT + + PE Q+ VI+PY
Sbjct: 551 FGPFCFFDIDGIESQPSGSGSWVNEDE---VEFITLIYHQLATHYPELKSSSQVAVISPY 607
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q L +++ + + + I+V +VD FQGREK+++I SCVR N Q IGF++D
Sbjct: 608 SLQVKLLKD--RFRSTFGDQSKEVIDVNTVDGFQGREKEVVIFSCVRCNKEQNIGFVSDF 665
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
RR+NVA+TRA+ ++VIG+ L + WNNL+ KE+
Sbjct: 666 RRMNVAITRARSAVLVIGSASTLKQDKHWNNLVESAKER 704
>gi|265766889|ref|ZP_06094718.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253266|gb|EEZ24742.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 634
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 233/452 (51%), Gaps = 38/452 (8%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + + VLVCA SN A
Sbjct: 189 FPWLNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRE-NQVLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMN 605
VD + EK+ G+ V+R+ SR D +SF + IR EM
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPSR-VNDKMLSFTYERRFEGHPAYTELWGIRKSIR--EMG 304
Query: 606 SELKKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ ++K E S + R R L+ + L A VI T V + L +
Sbjct: 305 NRMRKS-SYSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRR 363
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++ IDE+ QA E C I A ++I GDHCQL P + C +AA+ GL Q+L E++
Sbjct: 364 FTTLFIDEAAQALEAACWT-AIRRADRVIFAGDHCQLPPTIKCIEAAQNGLEQTLMEKVA 422
Query: 724 VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF 782
L +VQYRMH + +F S +FY+G LQ R + +D P D +
Sbjct: 423 ANKQETVSLLKVQYRMHQSIMQFSSEWFYQGELQAAPEVTNRGILDLDLPMSWIDTSEME 482
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR-CGMK---PEQI--GVITPYEGQRAF 836
+ EE G +N+ EA+ + + +IR G K E+I G+I+PY+ Q +
Sbjct: 483 F----HEEFVGESFGRINKPEANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKAQVQY 538
Query: 837 LVQHMQYQGSLPAKIYQ-EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L + +G L + ++ +I + +VD FQG+E+D+I +S VR+N+ IGFLND RR+NV
Sbjct: 539 L--RGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQIGFLNDLRRMNV 596
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
A+TRA+ ++++G+ +SK + L+ + +
Sbjct: 597 AITRARMKLVILGDAVTMSKHAFYKKLIGYIR 628
>gi|260593445|ref|ZP_05858903.1| putative helicase [Prevotella veroralis F0319]
gi|260534561|gb|EEX17178.1| putative helicase [Prevotella veroralis F0319]
Length = 646
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/464 (32%), Positives = 242/464 (52%), Gaps = 51/464 (10%)
Query: 497 FSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+ LP LN +Q AV + + ++++ GPPGTGKT T + + + + S VLVCA
Sbjct: 188 FAPIRLPWLNPTQEKAVNEVLWAKDVAIVHGPPGTGKTTTMVEAINETLMRE-SQVLVCA 246
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D + F R E + + +L ++
Sbjct: 247 QSNMAVDWISEKLVDRGINVLRIGNPTR-VNDKMLGF----TYERKFEAHPDYPQLWSIR 301
Query: 616 EETGELSSADEK-------RYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLK 661
+ EL + ++ + LK A + L A VI T VGA +
Sbjct: 302 KAIRELRNHRKRSSENYHQKMERLKSRATELEIRINSELFGEARVIASTLVGANSRVMEG 361
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
KF ++ IDE+ QA E C +P I A ++I GDHCQL P V A AGL ++L ER
Sbjct: 362 QKFTTLFIDEAAQALEAACWIP-IRRASRVIFAGDHCQLPPTVKSLAALHAGLGKTLMER 420
Query: 722 LV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP--WP 774
+V V+ + L+VQYRM+ E+ +F SN+FY G +++ R + D P W
Sbjct: 421 VVENKPEVVTL----LKVQYRMNEEIMRFSSNWFYGGQVESAPQIKYRGILDYDNPMVWI 476
Query: 775 VPDKPMLFYVTQG---------QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK---P 821
L ++G +E+ G +N+ EA ++ + + F + G +
Sbjct: 477 DTSDSSLENQSEGGQNEDKSIFKEQFVGESFGRINKGEAELTLQTLQSYFTKIGKQRILD 536
Query: 822 EQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVRS 878
E+I GVI+PY Q +L ++ + K Y+ I V +VD FQG+E+D+I++S VRS
Sbjct: 537 ERIDVGVISPYRAQVQYLRGLIKKREFF--KPYRSLISVNTVDGFQGQERDVILISLVRS 594
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
ND IGFL D RR+NVA+TRA+ +I++GN + +++ P + L
Sbjct: 595 NDAGQIGFLRDLRRMNVAITRARMKLIILGNVQTMTQHPFYKKL 638
>gi|146421053|ref|XP_001486478.1| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 166/505 (32%), Positives = 247/505 (48%), Gaps = 95/505 (18%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVK----------------Q 546
+N SQ A+ R SLIQGPPGTGKT T IV Y L + Q
Sbjct: 684 VNESQANAIISTHNRSGFSLIQGPPGTGKTKTILGIVGYNLSQDVPLGLIEVDGQQGKPQ 743
Query: 547 TGSPVLVCAPSNIAVDQLTEKIH---------RTGLKVVRVCAKSREAIDSPVSFLALHN 597
T S +LVCAPSN AVD+L ++ R VVR+ +A++S V L L
Sbjct: 744 TSSKILVCAPSNAAVDELVVRLRDGVFNFKGERITPSVVRLGRS--DAVNSAVRDLTLEE 801
Query: 598 QI------------RNMEMNSELKKL-------------------------LQLKE---E 617
+ R+ E+ +E KL L+L+E +
Sbjct: 802 LVDKQLQTTVQHVARDPEVRAEHTKLVKERDSLRQSLQSTTLLDEEFTQMELRLREVNKK 861
Query: 618 TGELSSA-DEKR------YR---MLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFH 665
EL+ DE+R YR + ++ + +L+ + +IC T G+ L L I F
Sbjct: 862 RNELAKKLDEQRENAAVAYRSRELERRQLQAKILNTSQIICSTLSGSAHDFLASLGITFE 921
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-V 724
++IDE+ Q E ++P+ G + I+VGD QL P V+ + AA +SLF R+
Sbjct: 922 KVIIDEACQCVELSAIIPLRYGCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVRMQEQ 981
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW--PVPDKPMLF 782
+ L+VQYRMHP++S+FPS FY L +G L K PW VP P F
Sbjct: 982 FPDSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGM----LEKNTRPWHSEVPFSPYRF 1037
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ----IGVITPYEGQRAFLV 838
+ G+ + S S NR EA V ++ + + P++ IGVI+PY+ Q L
Sbjct: 1038 FDIVGKHQQHESSRSLYNRAEAQVVLEMVDHLMYM-LPPKEFRGRIGVISPYKEQIRTLK 1096
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
+ +I+ E++ +VD +QG+EK++IIMSCVR+++ +GFL+D RR+NVALT
Sbjct: 1097 DI--FAKKYGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALT 1154
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLL 923
RA+ + ++GN K L + +W+ LL
Sbjct: 1155 RARTTLWILGNQKSLMRNKVWSRLL 1179
>gi|190346052|gb|EDK38051.2| hypothetical protein PGUG_02149 [Meyerozyma guilliermondii ATCC 6260]
Length = 1359
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 246/505 (48%), Gaps = 95/505 (18%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVK----------------Q 546
+N SQ A+ R SLIQGPPGTGKT T IV Y L + Q
Sbjct: 684 VNESQANAIISTHNRSGFSLIQGPPGTGKTKTILGIVGYNLSQDVPSGLIEVDGQQGKPQ 743
Query: 547 TGSPVLVCAPSNIAVDQLTEKIH---------RTGLKVVRVCAKSREAIDSPVSFLALHN 597
T S +LVCAPSN AVD+L ++ R VVR+ +A++S V L L
Sbjct: 744 TSSKILVCAPSNAAVDELVVRLRDGVFNFKGERITPSVVRLGRS--DAVNSAVRDLTLEE 801
Query: 598 QI------------RNMEMNSELKKLLQLK--------------EETGELSSA------- 624
+ R+ E+ +E KL++ + EE ++ S
Sbjct: 802 LVDKQLQTTVQHVARDPEVRAEHTKLVKERDSLRQSLQSTTLSDEEFTQMESRLREVNKK 861
Query: 625 --------DEKR------YR---MLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFH 665
DE+R YR + ++ + +L+ + +IC T G+ L L I F
Sbjct: 862 RNELAKKLDEQRENAAVAYRSRELERRQLQAKILNTSQIICSTLSGSAHDFLASLGITFE 921
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-V 724
++IDE+ Q E ++P+ G + I+VGD QL P V+ + AA +SLF R+
Sbjct: 922 KVIIDEACQCVELSAIIPLRYGCTKCIMVGDPKQLPPTVLSQTAASLNYDKSLFVRMQEQ 981
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW--PVPDKPMLF 782
+ L+VQYRMHP++S+FPS FY L +G L K PW VP P F
Sbjct: 982 FPDSAYLLDVQYRMHPDISRFPSAEFYRSRLHDGAGM----LEKNTRPWHSEVPFSPYRF 1037
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ----IGVITPYEGQRAFLV 838
+ G+ + S S NR EA V ++ + + P++ IGVI+PY+ Q L
Sbjct: 1038 FDIVGKHQQHESSRSLYNRAEAQVVLEMVDHLMYM-LPPKEFRGRIGVISPYKEQIRTLK 1096
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALT 898
+ +I+ E++ +VD +QG+EK++IIMSCVR+++ +GFL+D RR+NVALT
Sbjct: 1097 DI--FAKKYGRQIWNEVDFNTVDGYQGQEKEIIIMSCVRASETGNVGFLSDVRRMNVALT 1154
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLL 923
RA+ + ++GN K L + +W+ LL
Sbjct: 1155 RARTTLWILGNQKSLMRNKVWSRLL 1179
>gi|297805152|ref|XP_002870460.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
lyrata]
gi|297316296|gb|EFH46719.1| hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp.
lyrata]
Length = 979
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 288/612 (47%), Gaps = 79/612 (12%)
Query: 378 YFSLAKTDGDMRL-----MQGDELKLRY--SYDASKTWSGLGHVIKIPDNFGDEVGLELK 430
+ L K G+ RL GD + +R S A T G V + ++ G +G+ L+
Sbjct: 357 HLVLFKVGGNHRLPPTTLSPGDMVCIRVCDSRGAGATACTQGFVHNLGED-GCSIGVALE 415
Query: 431 SSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAVDDQSVSAYI 475
S G PT FS F KS DR+ + L+K + ++ S +
Sbjct: 416 SRHGDPT-----FSKLF-GKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSISV 469
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLPD------LNRSQVYAVKHAI--QRPLSLIQGP 527
L G D + +S L D + SQ A+ + +RP+ ++QGP
Sbjct: 470 VATLFGDEEDITWLEQNDYVDWSEAELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGP 529
Query: 528 PGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR---- 583
PGTGKT ++ V+Q G VLV AP+N AVD + EK+ GL +VRV +R
Sbjct: 530 PGTGKTGMLKEVITLAVQQ-GERVLVTAPTNAAVDNMVEKLLHLGLNIVRVGNPARISSA 588
Query: 584 -------EAIDSPVSFLALHNQIRNMEMNSELKKLLQ---LKEETGELSSADEKRYRMLK 633
E ++S ++ + + ++ +L++ L+ L +L K + +
Sbjct: 589 VASKSLGEIVNSKLASFRAELERKKSDLRKDLRQCLRDDVLAAGIRQLLKQLGKTLKKKE 648
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVILGAKQLI 692
K K +L NA V+ T +GA DP + +++ F ++IDE+ Q+ EP C +P++ G K+ I
Sbjct: 649 KETVKEILSNAHVVFATNIGAADPLIRRLETFDLVVIDEAGQSIEPSCWIPILQG-KRCI 707
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFPSNFF 750
L GD CQL PVV+ +KA GL SL ER L G+ +L QYRM+ ++ + S
Sbjct: 708 LSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIAGWASKEM 767
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVP----DKPMLFYVTQ--------GQEE---IAGSG 795
Y G L++ L ID P+ P P++ T+ G EE AG+G
Sbjct: 768 YGGWLKSAPSVASHLL--IDSPFVKPTWITQCPLVLLDTRMPYGSLSMGCEERLDPAGTG 825
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
+ Y N EA V I G+ P I V +PY Q L + + P + +
Sbjct: 826 SLY-NEGEADIVVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLD---DFP--VADGV 879
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
EVA++D+FQGRE D +I+S VRSN+ +GFL D RR+NVA+TRA+ + V+ + +
Sbjct: 880 EVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICH 939
Query: 916 QPLWNNLLNFYK 927
LL +
Sbjct: 940 NTFLARLLRHIR 951
>gi|254565491|ref|XP_002489856.1| Hexameric DNA polymerase alpha-associated DNA helicase A involved
in lagging strand DNA synthesis [Komagataella pastoris
GS115]
gi|238029652|emb|CAY67575.1| Hexameric DNA polymerase alpha-associated DNA helicase A involved
in lagging strand DNA synthesis [Komagataella pastoris
GS115]
gi|328350271|emb|CCA36671.1| hypothetical protein PP7435_Chr1-0519 [Komagataella pastoris CBS
7435]
Length = 726
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 242/468 (51%), Gaps = 74/468 (15%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP---VLVCAPSNIAV 561
LN SQ A+ A+Q P+++I GPPGTGKT T +V QLVK GS +L+C PSNI+V
Sbjct: 241 LNDSQREAINFALQSPITIIHGPPGTGKTSTLVELVRQLVKARGSSSKRILICGPSNISV 300
Query: 562 DQLTEKIHR-------TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQL 614
D + E++ + K++RV +R + S + +L I+ E N LK +++
Sbjct: 301 DTILERLDDLYPNKADSMSKLIRVGHPAR--LLSSILNHSLELLIQGSESNEILKDIIKE 358
Query: 615 KEETGELSSA------------DEKRYRM-LKKNAEK---SLLDNADVICCTCVGAGDPR 658
++ + S D K R L++ A K L+ ++ V+ T GA
Sbjct: 359 IQDLMKKSKKMKSYRERKDCYLDVKNLRKDLRERARKITSELIRSSQVVVSTLHGASSRE 418
Query: 659 LLKIK-------FHSILIDESMQATEPECMVPVI--LGAKQLILVGDHCQLGPVVMC--- 706
L F +++IDE Q+ EP+C +P++ G +LI+ GD+ QL P +
Sbjct: 419 LFDAALNSQEGLFDTLIIDEVSQSLEPQCWIPLMAHTGINKLIIAGDNKQLSPTIKTLPE 478
Query: 707 ---KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFY------EGSL 755
K LS +LF+RLV + + F L +QYRM+ ++ +FPSN Y S+
Sbjct: 479 GKQKSKVVDILSTTLFDRLVSIHGQSFVKFLNIQYRMNEKIMRFPSNELYGAKLIAHKSV 538
Query: 756 QNGVCADERKLSKIDFPWPVPD-----KPMLFYVTQG-----QEEIAGSGTSYVNRTEAS 805
N C +D P+ V + +P+++Y TQG QE G+ Y N EA
Sbjct: 539 ANKTC--------LDLPYRVEETDDTIEPLIWYDTQGDEFPEQETEEDQGSKY-NENEAL 589
Query: 806 NVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
V K ++ G+ IG+I+PY Q +FL + + G E+E+++VD FQG
Sbjct: 590 LVAKHVRILLKAGVLQTDIGIISPYNAQVSFL-KELLINGD---DQLTELEISTVDGFQG 645
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
REK++II++ VRSN + +GFL D RRLNV++TRAK + VIG+ + L
Sbjct: 646 REKEIIILTLVRSNREKEVGFLKDFRRLNVSMTRAKKQLCVIGDMETL 693
>gi|396463537|ref|XP_003836379.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
gi|312212932|emb|CBX93014.1| similar to tRNA-splicing endonuclease [Leptosphaeria maculans JN3]
Length = 1964
Score = 209 bits (532), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 245/520 (47%), Gaps = 111/520 (21%)
Query: 501 NLPDLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV----KQTGSPV---- 551
N ++N +Q A+K A+ +LIQGPPG+GKT T IV ++ + G+ +
Sbjct: 1271 NTYNVNNAQAKAIKSALDNDAFTLIQGPPGSGKTKTITAIVGAILTDSLRTRGTTINVPG 1330
Query: 552 -----------LVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPVS 591
LVCAPSN AVD+L + + + +VR+ +AI V
Sbjct: 1331 QQRPNTATKKLLVCAPSNAAVDELVMRFMDGITTLNGEKRNVNIVRLGRS--DAIKVEVQ 1388
Query: 592 FLALHNQI----------------------RNMEMNSELKKLLQLKEETGELSS------ 623
+ L + + +M SE K ++ +TGE+
Sbjct: 1389 EVTLETLVAKKLNLNSSDSKNDAEAKSKIFQEHKMISEQLKQAYMQRDTGEIKGEAAAKL 1448
Query: 624 ---------------------ADEKRYR-----MLKKNAEKSLLDNADVICCTCVGAGDP 657
DE++ + + ++ A++S+L++A ++C T G+G
Sbjct: 1449 DDDINALRRRKTALGTKIDNVKDEEKIQNRTADLDRRRAQESILNDAHIVCATLSGSGHE 1508
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L I+F ++++DE+ Q E ++P+ G + ILVGD QL P V K+AAR
Sbjct: 1509 MFQGLSIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAARFQYE 1568
Query: 716 QSLFERL-------VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
QSLF R+ V L L+ QYRMHPE+S FPS FY+G L +G D L K
Sbjct: 1569 QSLFVRMQKNHPDDVHL------LDTQYRMHPEISLFPSQTFYDGKLLDG--GDMAGLRK 1620
Query: 769 IDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-----Q 823
+ + P F+ QGQ+E A G S +N E ++ TR I P+ +
Sbjct: 1621 KPWHQSMLLGPYRFFDVQGQQEAAPKGHSLINMKEIDIAIQLYTRLI--SDYPDYDFKGK 1678
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
+G+ITPY+ Q L ++ K + I+ + DAFQGRE ++II SCVR++ G
Sbjct: 1679 VGIITPYKSQLREL--KARFMARFGEKTDEMIDFNTTDAFQGRESEIIIFSCVRASPAGG 1736
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
IGFL D RR+NV LTRAK + V+GN + L + W L+
Sbjct: 1737 IGFLQDIRRMNVGLTRAKSSLWVLGNSQSLMRGEFWKKLV 1776
>gi|356501783|ref|XP_003519703.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 928
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 183/611 (29%), Positives = 287/611 (46%), Gaps = 77/611 (12%)
Query: 378 YFSLAKTDGDMRL-----MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDE---VGLEL 429
+ L K +G+ RL GD + +R +YD++ + + ++FGD+ + + L
Sbjct: 306 HLVLFKVEGNHRLPPTALSPGDMVCVR-TYDSTGAIT-TSCIQGFVNSFGDDGYSITVAL 363
Query: 430 KSSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAVDDQSVSAY 474
+S G PT FS F KS DR+Q + L+K + ++ S
Sbjct: 364 ESRHGDPT-----FSKLF-GKSVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSIS 417
Query: 475 IYHRLLGHNVDEVLFRCHLPKHFSAPNL------PDLNRSQVYAVKHAI--QRPLSLIQG 526
+ L G D + ++ NL + SQ A+ + +RP+ +IQG
Sbjct: 418 VVATLFGDGEDVAWLEKNQLVDWAEENLDARLGNETFDDSQQRAIAMGLNKKRPVLVIQG 477
Query: 527 PPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--- 583
PPGTGKT ++ V+Q G VLV AP+N AVD + EK+ GL +VRV +R
Sbjct: 478 PPGTGKTGLLKQLIVCAVQQ-GERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISK 536
Query: 584 --------EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKN 635
E +++ ++ + + ++ +L+ L+ + ++ R LKK
Sbjct: 537 TVGSKSLEEIVNAKLASFREEYERKKSDLRKDLRHCLKDDSLASGIRQLLKQLGRSLKKK 596
Query: 636 AEKSL---LDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVILGAKQL 691
++++ L +A V+ T GA DP + ++ F ++IDE+ QA EP C +P++ G K+
Sbjct: 597 EKQTVVEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQG-KRC 655
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFPSNF 749
IL GD CQL PV++ +KA GL SL ER L GI RL QYRM+ ++ + S
Sbjct: 656 ILAGDQCQLAPVILSRKALEGGLGISLLERAATLHEGILTTRLTTQYRMNDAIASWASKE 715
Query: 750 FYEGSLQNGVCADERKLSKIDFPWP--VPDKPMLFYVTQ--------GQEE---IAGSGT 796
Y G L++ L F P + P+L T+ G EE AG+G+
Sbjct: 716 MYGGLLKSSETVFSHLLVNSPFVKPTWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGS 775
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
Y N EA V + I G+ P I V +PY Q L + P E
Sbjct: 776 LY-NEGEAEIVLQHVFSLIYAGVSPTAIAVQSPYVAQVQLLRDKLD---EFPEA--AGTE 829
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
VA++D+FQGRE D +I+S VRSN +GFL D RR+NVA+TRA+ + ++ + +
Sbjct: 830 VATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHLALVCDSSTICHN 889
Query: 917 PLWNNLLNFYK 927
LL +
Sbjct: 890 TFLARLLRHIR 900
>gi|115386780|ref|XP_001209931.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190929|gb|EAU32629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 2086
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 256/531 (48%), Gaps = 112/531 (21%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVK------------------ 545
+N +Q A+K A+ +LIQGPPG+GKT T +V L+
Sbjct: 1294 VNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNNGVAISRPTTMSN 1353
Query: 546 -------QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR--------VCAKSREAIDSPV 590
T +LVCAPSN AVD+L + + G+K ++ + +AI++ V
Sbjct: 1354 ARPQARTTTSKKLLVCAPSNAAVDELVMRF-KNGVKTIQGREEKLSVIRLGRSDAINTNV 1412
Query: 591 SFLALHNQIRNMEMNSELKKLL---QLKEETGELSSAD---------------------- 625
+ L +++ N M+ +K L++ E +AD
Sbjct: 1413 LDVTL-DELVNARMSQTSRKETGERDLQQIYTEHKAADTAFKETRARIDQCRAQGLPVPA 1471
Query: 626 --EKRYRMLKKNAEK--SLLDNA--------------------------DVICCTCVGAG 655
E+ + +LKK + +DNA VIC T G+G
Sbjct: 1472 ELEREFDLLKKKKTQLSQEIDNARDKNHSAARDADLNRRRIQQEIIDGAHVICATLSGSG 1531
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A++
Sbjct: 1532 HEMFQNLSIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1591
Query: 714 LSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ R L++QYRMHPE+S FPS+ FY+G LQ+G D +L P
Sbjct: 1592 YEQSLFVRMQANHPRDVHLLDIQYRMHPEISAFPSSTFYDGKLQDG--PDMARLRT--RP 1647
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIGV 826
W + P F+ QG + A G S +N R E+++T F R +IG+
Sbjct: 1648 WHQGELLGPYRFFDVQGLHQSAAKGHSLINMAELRVAMQLYERLSTDF-RGIDFAGKIGI 1706
Query: 827 ITPYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
ITPY+GQ ++ M Q+ +I+ +I+ + DAFQGRE ++II SCVR+++ +GI
Sbjct: 1707 ITPYKGQ----LREMKNQFAARYGNEIFSKIDFNTTDAFQGRESEVIIFSCVRASN-KGI 1761
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
GFL+D RR+NV LTRAK + V+GN + L + WN L+ + + V EG
Sbjct: 1762 GFLSDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIKDARRRNVYTEG 1812
>gi|310790786|gb|EFQ26319.1| hypothetical protein GLRG_01463 [Glomerella graminicola M1.001]
Length = 690
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 162/504 (32%), Positives = 246/504 (48%), Gaps = 83/504 (16%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ QL+K +LVC PSNI+V
Sbjct: 207 PSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQLIK-LDLRILVCGPSNISV 265
Query: 562 DQLTEKIHRTGLKVVR----------VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL 611
D + E++ + ++R V A S + + A+ +R EM+++ +
Sbjct: 266 DNIVERLAPHKIPILRLGHPARLLPSVLAHSLDVLTQTSEAGAIVKDVR-AEMDAKQASI 324
Query: 612 LQLKEETGELSSADEKR--YRMLKKNAE----------KSLLDNADVICCTCVGAGDPRL 659
+ + + EKR Y LK+ + +L+ + V+ T GAG +L
Sbjct: 325 KKTR-------NGREKRQIYADLKELRKEFRERERRCVSNLIRESKVVLATLHGAGGHQL 377
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC------------- 706
+F ++IDE+ QA E +C VP +L AK+ + GDH QL P +
Sbjct: 378 RDQRFDIVIIDEASQALEAQCWVP-LLSAKKAVCAGDHLQLPPTIKSLNYRVKAAAVSED 436
Query: 707 ---KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
K+ L +LF+RL+ L + L QYRMH ++ +FPS+ YEG L
Sbjct: 437 GAEKQIKSMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYEGRLIAAEAV 496
Query: 762 DERKLSKIDFPWPVPD-----KPMLFYVTQG----------------QEEIAGSGTSYVN 800
R L D P+ V D +P++F TQG + + + G S N
Sbjct: 497 RGRLLK--DLPYEVRDTEDTNEPLVFIDTQGGDYPEKNEDDDKDAIKKAKFSLHGESKSN 554
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
EA+ V + + + G+KPE I V+TPY Q A L + LP IE+ SV
Sbjct: 555 EMEAALVRQHAQKLVDAGVKPEDIAVVTPYNAQLAVLAP---LKEQLPG-----IELGSV 606
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLW 919
D FQGREK+ +I+S VRSN H +GFL + RRLNVA+TR K + VIG+ + + +
Sbjct: 607 DGFQGREKEAVIVSLVRSNSHGEVGFLGEQRRLNVAMTRPKRSLTVIGDSETVKRGSNFL 666
Query: 920 NNLLNFYKEQKVLVEGPLNNLKES 943
++F +E L L++L+ S
Sbjct: 667 KRWMDFLEENADLRYPDLSSLQRS 690
>gi|367044056|ref|XP_003652408.1| hypothetical protein THITE_2047968 [Thielavia terrestris NRRL 8126]
gi|346999670|gb|AEO66072.1| hypothetical protein THITE_2047968 [Thielavia terrestris NRRL 8126]
Length = 728
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 256/515 (49%), Gaps = 97/515 (18%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ QL+K+ +LVC PSNI+V
Sbjct: 234 PTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLKRN-QRILVCGPSNISV 292
Query: 562 DQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFL-------ALHNQIRNMEMNSELKKL 611
D + E++ + ++R+ +R ++ + L A+ +R EM+++ +
Sbjct: 293 DNIVERLAPHKVPLIRLGHPARLLPSVLNHSLDVLTRTSEAGAIVKDVR-AEMDAKQASI 351
Query: 612 LQLKEETGELSSADEKR--YRMLKKNAE----------KSLLDNADVICCTCVGAGDPRL 659
+ + +A E+R Y LK+ + L+ + V+ T G+G +L
Sbjct: 352 RKTR-------NAKERRAIYADLKELRKEYRERERRCVSDLVAGSKVVLATLHGSGGFQL 404
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV------MCKKAARAG 713
+F ++IDE+ QA E +C V +L AK+ I GDH QL P + M K ++ G
Sbjct: 405 RDEQFDVVIIDEASQALEAQCWV-ALLAAKKAICAGDHLQLPPTIKSLNSKMTKPSSTKG 463
Query: 714 ----------------LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSL 755
L +LF+RL+ L + L QYRMH ++ +FPS+ YEG L
Sbjct: 464 KDAAAAADEPTIKGATLETTLFDRLLKLHGPSIKRMLTTQYRMHEKIMRFPSDELYEGKL 523
Query: 756 QNGVCADERKLSKI-DFPWPVPD-----KPMLFYVTQG----------QEEIAGSGT--- 796
+ AD K + D P+ V D +P++F TQG Q++ AG G
Sbjct: 524 ---IAADAVKARLLRDLPYEVADTDDTTEPLVFIDTQGGDFPEKNEDEQQDAAGGGKKLT 580
Query: 797 -------SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
S N EA+ V + R + G+KPE I V+TPY Q A L P
Sbjct: 581 KSSLYGDSKSNEMEAALVRQHVRRLVDAGVKPEDIAVVTPYNAQLAILA---------PL 631
Query: 850 K-IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
K ++ IE+ SVD FQGREK+ +I+S VRSN +GFL + RRLNVA+TR K + VIG
Sbjct: 632 KEMFPGIELGSVDGFQGREKEAVIVSLVRSNADGEVGFLGEKRRLNVAMTRPKRSLTVIG 691
Query: 909 NPKVLSK-QPLWNNLLNFYKEQKVLVEGPLNNLKE 942
+ + + K + +NF +E L L++L +
Sbjct: 692 DSETVKKGSKFLKDWMNFLEENADLRYPDLSSLSQ 726
>gi|66804903|ref|XP_636184.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
gi|60464545|gb|EAL62683.1| hypothetical protein DDB_G0289503 [Dictyostelium discoideum AX4]
Length = 1255
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 226/431 (52%), Gaps = 47/431 (10%)
Query: 505 LNRSQVYAVKHA-IQRPLSLIQGPPGTGKTVTSATIVYQLVK-QTGSPVLVCAPSNIAVD 562
LN SQ+ A+K + ++ ++LIQGPPGTGKT T ++ L+ +LVC PS+ +VD
Sbjct: 687 LNESQLNAIKSSLVESGITLIQGPPGTGKTTTINYLLSVLLAIDKKFKILVCGPSHASVD 746
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS 622
+ V + C K+ L++ +N + N ++ E
Sbjct: 747 E-----------VAKRCLKN-----------LLNSDGQNFKPN-------MVRTGRKEKI 777
Query: 623 SADEKRYRMLKKNAEK--SLLDNADVICCTCVGAGDPRLLK-IKFHSILIDESMQATEPE 679
S + ++ + KN+ + +L+ + ++ T G+G + + +LIDES Q++EP
Sbjct: 778 SPECQKISLKNKNSSRRINLIKSTSIVFSTLAGSGSKAIFENFSPDIVLIDESTQSSEPT 837
Query: 680 CMVPVILGA-KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 738
++P+ LG+ K+LILVGD QL P + K A GL SLFERL I L QYRM
Sbjct: 838 SIIPLSLGSIKKLILVGDPVQLAPTIFSKDGADCGLKISLFERLAK-SIDVQFLNTQYRM 896
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSY 798
HP +SKF S FY G+L++G + F + PM F+ ++I S
Sbjct: 897 HPVISKFISEEFYNGTLKDGENVSIDSFNNCKFHFDPSFGPMKFFNLPKSDQIV-IKKSI 955
Query: 799 VNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
+N+ E V +++ ++ C K G+ITPY+ Q ++Q ++ Q + Y
Sbjct: 956 MNQDEIDKVFTLIKELIEKYPEC--KKLSFGIITPYKLQ---MIQ-IKEQLNRSEHRYLN 1009
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
I V+++D QG EKD+IIMSCVR + GIGFL+D RR+NVALTRAK G+ VIG VL
Sbjct: 1010 ISVSTIDGVQGSEKDIIIMSCVRCTEKYGIGFLSDRRRINVALTRAKLGLYVIGTSWVLE 1069
Query: 915 KQPLWNNLLNF 925
K W N L +
Sbjct: 1070 KDNTWGNFLKY 1080
>gi|299740263|ref|XP_001838927.2| RNA helicase [Coprinopsis cinerea okayama7#130]
gi|298404163|gb|EAU82858.2| RNA helicase [Coprinopsis cinerea okayama7#130]
Length = 931
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 175/562 (31%), Positives = 260/562 (46%), Gaps = 94/562 (16%)
Query: 405 SKTW-SGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRK 463
++TW G H +++ DEV L G T F V F+ + RM AL
Sbjct: 336 NRTWYEGRVHEVRM-----DEVVLRFGD--GFNTYRGNRFDVRFVLNRLPYRRMHHAL-- 386
Query: 464 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP--------DLNRSQVYAVKH 515
V+++ R+L ++L + A +P D V A+ H
Sbjct: 387 -------VNSFAPRRILFPGPQDILGLKRVTAQQKAAIVPYYRQLKDDDEQLETVTAILH 439
Query: 516 AIQRPLS---LIQGPPGTGKTVTSATIVYQLV-KQTGSPVLVCAPSNIAVDQLTEKIHRT 571
Q P S ++ GPPGTGKTVT + QL+ K +L CAPSN A D L +K+
Sbjct: 440 --QNPGSAPFIVFGPPGTGKTVTIIEAMKQLLDKDPNVRILACAPSNSAADLLAQKLADR 497
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRM 631
G KVV +NS +K+ L + E S +E
Sbjct: 498 GPKVV-------------------------FRLNSLTRKVSDLPKNLKEFSRINENTVFA 532
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPV--IL 686
+ E L V+ TC+ G P L +K + I IDE+ Q EPE + P+ +
Sbjct: 533 VPPVEE---LLQYRVVVATCLSGGVPASLGVKRGHYSHIFIDEAGQGKEPEVIFPIKSLA 589
Query: 687 GAK-QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV----------VLGIRPFRLEVQ 735
G K +IL GD+ QLGP+V C AA GL S RL+ GI +L
Sbjct: 590 GPKTNIILAGDNQQLGPIVQCNIAAGLGLKTSYLARLMDRDVYNLDNGGRGITIVKLVKN 649
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLFYVTQGQEEIAG 793
+R HP + +F ++ FY LQ C D + ++ +P K P++F+ G+++
Sbjct: 650 FRSHPAILEFSNDHFYSSELQP--CGDRAMICSLETFEELPKKRFPLIFHGIVGKDQREA 707
Query: 794 SGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
S S+ N EAS V+K + + + E IG+ITPY QR ++ + + +
Sbjct: 708 SSPSFFNVEEASQVKKYCKALLDNRKLRLTAEHIGIITPYHAQRCKILDLLHKEVKM--- 764
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDH-------QGIGFLNDPRRLNVALTRAKYG 903
++I+V SV+ FQG+E+ +IIMS VRSN + +GF+ + RR+NVA+TRA+
Sbjct: 765 --RDIKVGSVEEFQGQERRIIIMSTVRSNTEYVSSDITRSLGFVANSRRMNVAITRAQAL 822
Query: 904 IIVIGNPKVLSKQPLWNNLLNF 925
++VIGNP VLS PLW + L F
Sbjct: 823 LVVIGNPIVLSLDPLWRSFLGF 844
>gi|210075156|ref|XP_002142993.1| YALI0A19404p [Yarrowia lipolytica]
gi|199424904|emb|CAG84178.4| YALI0A19404p [Yarrowia lipolytica CLIB122]
Length = 1930
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 158/521 (30%), Positives = 245/521 (47%), Gaps = 91/521 (17%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPV-------LVCAP 556
+N SQ A+ ++ SLIQGPPGTGKT T IV + + S + L+CAP
Sbjct: 1235 VNDSQAAAIYGSLNNTGFSLIQGPPGTGKTKTILGIVGSFLSKKASDIGNDNRRILLCAP 1294
Query: 557 SNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNM----- 602
SN AVD+L ++ ++ K++R+ EA++S V L ++ +
Sbjct: 1295 SNAAVDELVLRLSDGIYSSSGQKSEPKIIRIGRS--EAVNSKVKKYVLEERVDALLKEQE 1352
Query: 603 ---------EMNSELKKLLQLKEETG---------------------------------- 619
E+ ++ KLL ++E
Sbjct: 1353 KDSVVNSTPELRQKMNKLLDERKELSAKLDDNSVKLSNDEVASIQSRLMVINREKNKIGS 1412
Query: 620 ------ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFHSILIDE 671
E +A+ +R K+N +L A++IC T + L L + F +++IDE
Sbjct: 1413 EIDQQREKHAANFRRKETEKRNLNIRVLKEAEIICSTLSASSHNMLKSLGVAFETVIIDE 1472
Query: 672 SMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR 731
+ Q E ++P+ G I+VGD QL P V+ AA++ QSLF R+
Sbjct: 1473 ACQCIELSVLIPMKYGCTNAIMVGDPNQLPPTVLSTVAAKSKYEQSLFVRMQTANPSALH 1532
Query: 732 -LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLFYVTQGQ 788
L+ QYRMHP++S FP FY G L++G E K PW + P F+ G
Sbjct: 1533 MLDTQYRMHPDISVFPREQFYRGILKDGAGMAE----KTKKPWHEYKQLAPYAFFDVAGN 1588
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM--QYQGS 846
+E A S+ N E +++ R + IG+I+PY+ Q L +H +Y G
Sbjct: 1589 QE-ATRNHSFFNDAEVHLADQLY-RLMSNMYGKIDIGIISPYKQQVLRLKRHFTREYGGD 1646
Query: 847 LPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN-DHQGIGFLNDPRRLNVALTRAKYGII 905
I +IE SVD FQG+EKD+IIMSCVR++ D +GFL D RR+NVA TRA+ +
Sbjct: 1647 ----ILDKIEFNSVDGFQGQEKDIIIMSCVRASPDSDSVGFLADKRRMNVAFTRARSSMW 1702
Query: 906 VIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
++GN LS+ +W ++N + + +L++G K+ LI+
Sbjct: 1703 ILGNADTLSRNTIWRKVVNDARNRDMLMDGNRPLRKQDLIV 1743
>gi|240273304|gb|EER36825.1| helicase SEN1 [Ajellomyces capsulatus H143]
Length = 2150
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 254/532 (47%), Gaps = 116/532 (21%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------YQLVKQTGSP---- 550
+N +Q AV+ A+ +LIQGPPG+GKT T +V Q + + GS
Sbjct: 1293 VNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKIARPGSSGDFR 1352
Query: 551 ----------VLVCAPSNIAVDQL---------TEKIHRTGLKVVRVCAKSREAIDSPVS 591
+LVCAPSN AVD+L T + + VVR+ +AI+S V
Sbjct: 1353 PATRATTSGKLLVCAPSNAAVDELVMRFKEGVITSSGQKHNISVVRLGRS--DAINSNVM 1410
Query: 592 FLAL----------------------------------HNQIR---------NMEMNSEL 608
+ L N+IR + SEL
Sbjct: 1411 DVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIRERLDQCRAKGQHVPSEL 1470
Query: 609 KKLLQL-KEETGELSSADE----------KRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
++ L K + +LS A + + + +K ++ +++ + VIC T G+G
Sbjct: 1471 EREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGHE 1530
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A+R
Sbjct: 1531 MFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQYE 1590
Query: 716 QSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
QSLF R+ + L+ QYRMHPE+S+FPS FY+G L++G D+ ++ PW
Sbjct: 1591 QSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDGPDMDKLRVR----PWH 1646
Query: 775 VPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIGVIT 828
+ P F+ QG A G S VN R E++T ++ K +IG+IT
Sbjct: 1647 SSELLGPYRFFDVQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFK-GKIGIIT 1705
Query: 829 PYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
PY+GQ ++ M Q+ I+ +E + DAFQGRE ++II SCVR+++ +GIGF
Sbjct: 1706 PYKGQ----LREMKNQFANKYGNSIFTTVEFNTTDAFQGRECEVIIFSCVRASN-RGIGF 1760
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL------NFYKEQKVL 932
L D RR+NV LTRAK + V+GN + L + WN L+ N Y + +L
Sbjct: 1761 LADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLIIDAQSRNLYTQGDIL 1812
>gi|11498984|ref|NP_070217.1| DNA helicase [Archaeoglobus fulgidus DSM 4304]
gi|2649188|gb|AAB89860.1| DNA helicase, putative [Archaeoglobus fulgidus DSM 4304]
Length = 648
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 173/491 (35%), Positives = 255/491 (51%), Gaps = 85/491 (17%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LNR+Q+ AV A+ LI GP GTGKT T +V QLVK+ G VLV A SN AVD
Sbjct: 169 LNRAQLKAVGCAVSTDDFFLIHGPFGTGKTRTVVEVVRQLVKR-GERVLVTAESNTAVDN 227
Query: 564 LTEKIHRTGLKVVRVCAKSR------------------------------EAIDSPVSFL 593
L E + + +K+VR+ SR E I+ + L
Sbjct: 228 LVELL--SDMKIVRLGHPSRVEKRLKEHTLASLVLNHPDYKRIEEIKGKIEEIERRMERL 285
Query: 594 ALHN-QIRNMEMNSELKKL--------------LQLKEETGELSSADEKRYRMLKKNAE- 637
+ Q+R + E+ +L ++ E E A ++ Y +K+ E
Sbjct: 286 TKPSPQLRRGLSDEEILRLARSNRGARGVAAKKIRSMAEWIEARKALDQLYTEMKEEEER 345
Query: 638 --KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
K +++ +DV+ T A LL+ F + +IDE+ QAT P ++P I A++ IL G
Sbjct: 346 IVKEIIEESDVVISTNSSAF---LLEESFDTAVIDEASQATIPSVLIP-INRARKFILAG 401
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGS 754
DH QL P VM KA + LS++LFE+L+ L +L VQYRM+ +L +FPS FY G
Sbjct: 402 DHRQLPPTVM--KAEK--LSETLFEKLIELYPEKSQLLNVQYRMNEKLMEFPSREFYGGR 457
Query: 755 LQNGVCADERKLSKI------DFPWPVPDKPMLFYVT-----QGQEEIAGSGTSYVNRTE 803
+ LS+I + D+P++F T + + ++A S + Y NR E
Sbjct: 458 IVAHESCTAIALSQIAKREAEKLREILGDEPLVFIDTSKCKNRWEGKLADSTSRY-NRLE 516
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A V +I T ++ G+K EQIGVITPY+ Q L + + ++EV+SVD F
Sbjct: 517 AEIVTEIVTELLKMGLKKEQIGVITPYDDQVDLLREKV------------DVEVSSVDGF 564
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREK++II+S VRSN + IGFL+D RRLNV+LTRA+ +I++G+ + LS + L+
Sbjct: 565 QGREKEVIIISFVRSNRKREIGFLDDLRRLNVSLTRARRKLIMVGDSETLSVNGTYARLI 624
Query: 924 NFYKEQKVLVE 934
+ K + V VE
Sbjct: 625 DHVKRKGVYVE 635
>gi|46133873|ref|XP_389252.1| hypothetical protein FG09076.1 [Gibberella zeae PH-1]
Length = 1721
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 159/471 (33%), Positives = 236/471 (50%), Gaps = 66/471 (14%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQ 563
LN SQ A++ A++ L + GPPGTGKT T ++ L + + VLV AP++ AVD
Sbjct: 1281 LNESQNKAIQLALESSLLCLWGPPGTGKTETIVEMICALQIANEKARVLVTAPTHNAVDN 1340
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQ-LKEETGELS 622
+ R +K ++ + P LA Q + +++E+ K+ L++ T +
Sbjct: 1341 ----VMRRYIKQIQ---------EQP---LARKVQPNVLRVSTEVHKVSDDLRKYTCDAM 1384
Query: 623 SADEKR--YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
+ E Y+ +KK + ++ ++D + TC+GAG L F +++DE+ Q TEP
Sbjct: 1385 AGQEIHGDYKAMKKATQ--MIKDSDTVFTTCIGAGIGLLRSEFFDIVIVDEASQQTEPSS 1442
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-------LGIRPFRLE 733
+VP++ G + ILVGDH QL P V A SLFERL G L+
Sbjct: 1443 LVPLVKGCSKAILVGDHVQLRPTVQQTSLA-LDFDVSLFERLYTEAGGSTESGFNTMMLD 1501
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP------------DKPML 781
QYRMHP+L +F S FYEG L++G+ +R L K +FP+P+ D
Sbjct: 1502 TQYRMHPKLCEFSSGAFYEGKLKSGIGISDRPLIKSEFPFPLAVLTKQSGDSGKTDYERA 1561
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
+V +EI G S N+ +A I + + + I V+TPY Q
Sbjct: 1562 IFVNCDTKEI--QGKSKENKGQAELCLHIC-KLLTSQNDTQSIVVLTPYTRQAE------ 1612
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
SL + IEV+S+D FQGRE D+I+ VR N+H+ IGFL D RR+NVALTRA+
Sbjct: 1613 ----SLKRMLPSTIEVSSIDGFQGREADVIVFVTVRCNEHRSIGFLKDMRRMNVALTRAR 1668
Query: 902 YGIIVIGNPKVLSK-------QPLWNNLLNFYKEQKVLV----EGPLNNLK 941
+IVIG+ L++ +W LL E KV V +GP + LK
Sbjct: 1669 SAVIVIGHRATLTEGTEDEESSAMWKWLLRSLTEVKVEVPTSGDGPTDGLK 1719
>gi|207342692|gb|EDZ70377.1| YLR430Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 955
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 294 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 353
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 354 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 411
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 412 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 471
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 472 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 531
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 532 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 591
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 592 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 648
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 649 QLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 708
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 709 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 765
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 766 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 825
Query: 940 LKESLI 945
+S++
Sbjct: 826 RAQSIL 831
>gi|134078610|emb|CAK32628.1| unnamed protein product [Aspergillus niger]
Length = 723
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 250/523 (47%), Gaps = 79/523 (15%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL----PDLNRS 508
++ RM + K +S + GH LP + S L P LN S
Sbjct: 193 TYRRMNQTMEKMVKMAESEHTHFMRVAFGHT------SPMLPDYDSIGALEFTDPTLNDS 246
Query: 509 QVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
Q A++ A+ R ++LI GPPGTGKT T ++ Q+V Q VLVC PSNI+VD + E+
Sbjct: 247 QKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMV-QRKQRVLVCGPSNISVDNIVER 305
Query: 568 IHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSA 624
+ + VVR+ +R +D + L H + K++ Q + + +A
Sbjct: 306 LAPKKVPVVRIGHPARLLPSVLDHSLEVLT-HTSEAAAIVRDVRKEIDQKQASIRKTRAA 364
Query: 625 DEKR------------YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
E+R +R + ++L+ + V+ T GAG +L KF ++IDE+
Sbjct: 365 RERRAIYDDLRELRREFRERENKCVENLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEA 424
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA-------------------RAG 713
QA E +C +P +L A +++L GDH QL P V K
Sbjct: 425 SQALEAQCWIP-LLSASKVVLAGDHLQLPPTVKSTKENAKKAAKEKEDKKENGELLENVS 483
Query: 714 LSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
L +LF+RL+ + GI+ L QYRMH ++ +FPS+ Y+ L +R L D
Sbjct: 484 LETTLFDRLLSMHGPGIKRM-LTTQYRMHEKIMQFPSDELYDSKLMAADSVKDRLLK--D 540
Query: 771 FPWPVPD-----KPMLFYVTQGQE-----------EIAGSGTSYVNRTEASNVEKITTRF 814
P+ V + +P++F+ TQG + + A G S N EA V +
Sbjct: 541 LPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGESKSNDMEALVVSRHVDAL 600
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
+ G+ PE I VITPY GQ A L Q ++ + Y IE+ SVD FQGREK+ +++S
Sbjct: 601 VDAGIHPEDIAVITPYNGQLAVLSQMLREK-------YPSIELGSVDGFQGREKEAVVVS 653
Query: 875 CVRSNDHQGIGFLNDPRRLN--VALTRAKYGIIVIGNPKVLSK 915
VRSN +GFL + RRLN VA+TR K + + G+ + +SK
Sbjct: 654 LVRSNSEHEVGFLGERRRLNALVAMTRPKRHLCICGDSETISK 696
>gi|256810316|ref|YP_003127685.1| DNA helicase [Methanocaldococcus fervens AG86]
gi|256793516|gb|ACV24185.1| DNA helicase [Methanocaldococcus fervens AG86]
Length = 655
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 264/552 (47%), Gaps = 102/552 (18%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
+D +F RM+ ALR+FA + AYI +LG E R + F +L
Sbjct: 122 IDLYVNDITFKRMKEALREFARKRDKL-AYI---ILGIEHPEKPLREDIELEFYDKHL-- 175
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
N SQ AVK A+ + L LI GPPGTGKT T ++ Q V+ VL A SNIA D
Sbjct: 176 -NESQKLAVKKAVLSKDLYLIHGPPGTGKTRTLTEVIVQEVRFNKHKVLATADSNIAADN 234
Query: 564 LTEKIHRT--GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
+ E + + LKVVRV +R + D L H+ +E + + +++L LKE+ E+
Sbjct: 235 ILEYLIKKYPDLKVVRVGHPTRISKD-----LIQHSLPYLIENHEKYQEILSLKEKIKEI 289
Query: 622 SS----------------ADEKRYRMLKKNAE---------------------------- 637
+DE+ ++ K+ +
Sbjct: 290 KEQRDKFLKPSPRWRRGMSDEQILKVAKRRKDYRGVPKEKIISMAEWIVRNKKIKKIINS 349
Query: 638 ---------KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
+L ADVI T AG L +F ++IDE QA EP C++P++ G
Sbjct: 350 LDEITEKIMNEILSEADVIVATNSMAGSEILKGWEFDVVVIDEGSQAMEPSCLIPIVKG- 408
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-----LEVQYRMHPELS 743
K+LI+ GDH QL P V+ + L ++LFERL I+ + LE+QYRM+ ++
Sbjct: 409 KKLIMAGDHKQLPPTVLSENEE---LKKTLFERL----IKKYPEFSSILEIQYRMNEKIM 461
Query: 744 KFPSNFFYEG------SLQNGVCADERKLSKIDFPWP--VPDKPMLFYVTQGQEEIAGSG 795
+FP+ FY+ S++N D K +ID V + P+ F+ +G E
Sbjct: 462 EFPNRMFYDNKLKADESVKNITLLDLVKEEEIDESDRDIVNEIPVQFFHVEGVERKDKES 521
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
SY N EA V ++ + I+ + VITPY+ Q +L + + Q ++
Sbjct: 522 PSYYNIEEAEKVLEVVKKLIKYKI---PTNVITPYDAQVRYLRRLFEEQNI-------DV 571
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
EV +VD FQGRE + I++S VR+ + GFL D RRLNVA+TRAK +I+IGN +L +
Sbjct: 572 EVNTVDGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVAITRAKRKLILIGNENLLKQ 628
Query: 916 QPLWNNLLNFYK 927
++N ++ + K
Sbjct: 629 DKVYNEMIKWAK 640
>gi|189208013|ref|XP_001940340.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976433|gb|EDU43059.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 715
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 238/485 (49%), Gaps = 74/485 (15%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
P H N P LN SQ A++ A+ R ++LI GPPGTGKT T ++ QL+KQ +L
Sbjct: 190 PLHNLEWNDPSLNDSQQEAIRFALASREVALIHGPPGTGKTHTLIELILQLLKQKLR-LL 248
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR----------EAIDSPVSFLALHNQIRNM 602
VC PSNI+VD + E++ + +VR+ +R + + AL +R
Sbjct: 249 VCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSVLNHSLDVLTRTSEAAALVQDVRK- 307
Query: 603 EMN---SELKKLLQLKEETGELSSADEKR--YRMLKKNAEKSLLDNADVICCTCVGAGDP 657
EM+ S ++K KE + E R +R +K +L+ + V+ T GAG
Sbjct: 308 EMDDKQSSIRKTRNAKERRQIYTELKELRQEFREREKGCVNNLVSGSKVVLATLHGAGGF 367
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVI-LGAKQLILVGDHCQLGPVVMC---------- 706
L +F ++IDE+ QA E +C VP++ + A +L+L GDH QL P +
Sbjct: 368 HLKGQEFDVVIIDEASQALEAQCWVPLLWVKASKLVLAGDHLQLPPTIKSLNSKESKAAK 427
Query: 707 --------------KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFF 750
K A L +LF+RL+ L + L QYRMH ++ +FPS+
Sbjct: 428 KDAKKSTDKTGDAEKPAINTTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDEL 487
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPD-----KPMLFYVTQG--------QEEIAGSG-- 795
Y+ L ER L D P+ V D +P++F+ TQG E + G G
Sbjct: 488 YDSKLIAAEFVKERLLK--DLPYEVEDTEDTREPLVFWDTQGGDFPEKIEDEGVIGKGGK 545
Query: 796 -----TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
S N EA+ V+ + I G+K E I V+TPY Q A L G + +
Sbjct: 546 GMNLGDSKSNEAEAALVKMHVSNLISAGVKAEDIAVVTPYNAQLALL-------GGMLKE 598
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
Y IE+ SVD FQGREK+ +I+S VRSN +GFL + RRLNVA+TR K + VIG+
Sbjct: 599 AYPGIELGSVDGFQGREKEAVIVSTVRSNSEHEVGFLGEKRRLNVAMTRPKRHLCVIGDS 658
Query: 911 KVLSK 915
+SK
Sbjct: 659 DTISK 663
>gi|126302999|ref|XP_001376033.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Monodelphis domestica]
Length = 2843
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 255/500 (51%), Gaps = 86/500 (17%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ------------TGSP-- 550
LN+SQ AV A+Q+P +LIQGPPGTGKTV IVY K TG
Sbjct: 2344 LNKSQNSAVLEALQKPFTLIQGPPGTGKTVVGVHIVYWFNKLNQEKPETDPLPLTGDNKN 2403
Query: 551 -----VLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSREAIDSPV--SF--------- 592
+L C PSN +VD ++E + + LK ++V ++ EA++ PV S+
Sbjct: 2404 RGEKCILYCGPSNKSVDVVSEILLQWKEELKPLQVYSEQMEAMEFPVPGSYRKMFRKNTR 2463
Query: 593 ----------LALHNQIRNMEMNSELKKLLQL--KEETGELSSADE-KRYRMLKKNAEKS 639
+ LH++IR M N +K+++ + G+ S DE + Y+ + K A
Sbjct: 2464 EGKPKPELRDIVLHHRIR-MPSNPFFRKIIEFDARVRKGDQFSEDEIEEYKSITKLARMV 2522
Query: 640 LLDNADVICCTCVGAGDPRLLK-IKFHSILIDESMQATEPECMVPVI--LGAKQLILVGD 696
L N +I CTC A L+K + ILIDE+ ATEPE ++P++ A++++L+GD
Sbjct: 2523 ELKNHGIILCTCSCAASSILVKHLNVKQILIDEAGMATEPESLIPLVNFPQAEKVVLLGD 2582
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQ 756
H QL P V GL +SLFER + + L++QYRMH ++ +FPS FY+ L+
Sbjct: 2583 HKQLQPFVKNDHCQNLGLEKSLFERY---HGQAWMLDIQYRMHNDICRFPSKEFYDNKLK 2639
Query: 757 NGVCADERKLSKIDFPWPVPDK---PMLFYVTQGQEEI------AGSGTSYVNRTEASNV 807
+ KL ++ + PD+ P++F QG EE G+ S NR E +V
Sbjct: 2640 TSL-----KLKRMPSVFCHPDQVSCPIIFGYVQGVEESLLVSTDEGNENSRANRDEVDHV 2694
Query: 808 EKITTRF-IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGR 866
+I + + +KP+ I +++PY Q + + + + +G + V+S+ QG
Sbjct: 2695 VRIANQLTLDRTIKPKDIAILSPYNAQVSEINKRLLKEG------ITGVTVSSIKKSQGS 2748
Query: 867 EKDLIIMSCVRSND-------------HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
E +I+S VRS + +GF++DP ++NV +TRA+ G+ +IGN +L
Sbjct: 2749 EWRYVILSTVRSCPPGEIDGRPTKSWLKKHLGFVSDPHQVNVGITRAQEGLCIIGNHYLL 2808
Query: 914 SKQPLWNNLLNFYKEQKVLV 933
S P+W L++FY ++ V
Sbjct: 2809 SCCPMWQRLIDFYTKKGCCV 2828
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 210/540 (38%), Gaps = 86/540 (15%)
Query: 415 IKIPDNFGDEVGLELKSSAGA------PTEATTGFSVDFIWKSTSFDRMQLALRK--FAV 466
+ PDN EV +E+K+++ P + + + T +Q + + F +
Sbjct: 674 VPAPDNRVYEVQVEVKATSDQNVWLLLPAHCCSALGLKD--EDTKLMEIQFQIDRTVFGI 731
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKH--AIQRPLS-- 522
Q++ A +L+ N+ C LP P N Q A+ I PLS
Sbjct: 732 WHQAIDALQDDKLVTPNMSA----CSLPSLRPPPQELRGNPKQKQAISFITGIASPLSRV 787
Query: 523 ---LIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC 579
LI GP GTGKT T A +++KQ + VL+C +N A D
Sbjct: 788 PPLLIYGPFGTGKTYTLAMATLEVMKQPNTKVLICTHTNSAADIYI-------------- 833
Query: 580 AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
RE + V+ A H + + + S L Q T + + R R + +
Sbjct: 834 ---REYFHAYVT--AGHPEAVPLRVKSTESFLNQTDPTTLQYCCLTDDR-RFFRDPTQAE 887
Query: 640 LLDNADVICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK--QLILV 694
L + +I T + R L + F ILIDE+ Q E E ++P+ + +++L
Sbjct: 888 LKQHRIIITTTTLS----RSLDVPPGFFSHILIDEAAQMLECEAIIPLAYATRNTRIVLA 943
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR-----PFRLEV----QYRMHPELSKF 745
GDH Q+ P + R +L RL R F+ V YR + F
Sbjct: 944 GDHMQITPKLF-SVGDRKSADHTLLNRLFQYYQRENHELAFQSRVIFHENYRSTKAIISF 1002
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS 805
S FY N + A + P P++F G E + TS+ NR E
Sbjct: 1003 VSRNFYVAK-GNPIQASGQ------IPGHPEKHPLMFCHVAGTPERDITMTSWFNRAEIV 1055
Query: 806 NVEKITTRFIRCGM----KPE--QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
V + F P+ QI V++ + Q L Q ++ K E+ V +
Sbjct: 1056 EVIEKVQEFYSIWAYQWNSPDLKQICVVS-HGSQVKTLRQELR------KKQLGEVAVEN 1108
Query: 860 VDAFQGREKDLIIMSCVRSNDH------QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+ GRE +II+S V + D + F ++ R LN +TRA+ ++ +G+ L
Sbjct: 1109 FENLPGREFRVIILSTVHTRDSLLSSSVPHLEFFSEARVLNTVMTRAQSQVVAVGDAVAL 1168
>gi|423344038|ref|ZP_17321751.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
gi|409213558|gb|EKN06575.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
Length = 637
Score = 209 bits (531), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 156/514 (30%), Positives = 251/514 (48%), Gaps = 43/514 (8%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
V + TS+ M AL + AY+ LLG R P F P
Sbjct: 136 VQLYFDETSYKTMFNALSTVIQAKGNRLAYLRDVLLGKT--PAGRRTLFPMRF-----PW 188
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV H + + +S++ GPPGTGKT T +Y+ + + V+VCA SN AVD
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQ-VMVCAQSNTAVDW 247
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFL---------------ALHNQIRNMEMNSEL 608
++EK+ G+ V+R+ +R D +SF + IR E+ S L
Sbjct: 248 ISEKLVDRGIHVLRIGNPTR-VNDKMLSFTYERRFESHPDYAELWGIRKAIR--EIQSNL 304
Query: 609 KKLLQLKEETGELSSADEKRYRM--LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
++ ++ET + R+R L+ + L D A V+ CT VG+ + L F +
Sbjct: 305 RRKSHSEKETVR-NRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTT 363
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG 726
+ IDE+ QA E C + I A ++IL GDH QL P + C +AAR GL +L +++
Sbjct: 364 LFIDEAAQALEAACWI-AIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRK 422
Query: 727 IRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT 785
L + QYRM+ + +FPS +FY LQ+ R + + D P D +
Sbjct: 423 PETVSLLKTQYRMNESIMRFPSRWFYRDELQSAPEVKHRGILEFDTPVVWLDTADCHF-- 480
Query: 786 QGQEEIAGSGTSYVNRTEASNVEKITTRFI------RCGMKPEQIGVITPYEGQRAFLVQ 839
+E+ S +N+ EA+ + ++I R + G+I+PY+ Q + ++
Sbjct: 481 --EEDQLTDSMSRINKDEATLLVSTLQKYIEKIGKERVLDESIDFGLISPYKSQVQY-IR 537
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
+ + + I V +VD FQG+E+D+I++S VR+ND IGFL D RR+NVA+TR
Sbjct: 538 GLVKRNVFFKPFRRLITVHTVDGFQGQERDVIMISLVRANDKGRIGFLGDLRRMNVAITR 597
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
A+ ++++G+ L++ + L + +E +V
Sbjct: 598 ARMKLMILGDAPTLTRHAFYKELYEYIRENGQVV 631
>gi|405963675|gb|EKC29231.1| hypothetical protein CGI_10027445 [Crassostrea gigas]
Length = 522
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 239/482 (49%), Gaps = 72/482 (14%)
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK-------QTGSPVLV--CAP 556
N Q A+K A++ SLIQGPPGTGKT T ++ + + G LV C P
Sbjct: 28 NEKQSEAIKQALKSRFSLIQGPPGTGKTRTGMKLIILFNRINLKHREEGGDHKLVVYCGP 87
Query: 557 SNIAVDQLTE--KIHRTGL--KVVRVCAKSREAI--------------------DSPVSF 592
SN +VD + + KIH L K+VR+ S E + DS ++
Sbjct: 88 SNKSVDLVAKWMKIHIPDLCPKIVRMYGNSMENMMYPIPNREYINQRSCKDNRPDSDLAD 147
Query: 593 LALHNQIRNMEMNSELKKLL----QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVIC 648
++LHN IRN E N +KL Q K ++++ D +Y+ A + L DVI
Sbjct: 148 ISLHNLIRNKE-NPYAEKLAMFEKQFKNSPDDIATQDILKYKKAISMATQEELKKYDVIF 206
Query: 649 CTCVGAGDPRLLKI---KFHSILIDESMQATEPECMVPVI-LGAKQLILVGDHCQLGPVV 704
CT A P+ L+ K ++IDE+ TEPE + P+I A Q++L+GDH QL P++
Sbjct: 207 CTTAAALSPKFLRATDGKIFQLIIDEAGMCTEPETLAPIIATKADQVVLIGDHKQLQPII 266
Query: 705 MCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
+C++A+ GLS+SLFER + L+ QYRM+P++ +FPS FY+G L+ G
Sbjct: 267 LCQEASDLGLSKSLFERYADSAV---FLDTQYRMNPKICEFPSTQFYKGRLKTGPVGKWT 323
Query: 765 KLSKIDFPWPVPDKPMLFYVTQGQEEI------AGSGTSYVNRTEASNVEKITTRFIRCG 818
+ W PD P+LF +G+EE G+ S NR E +V K+ +
Sbjct: 324 VKKPLQI-WKRPDVPLLFCHIEGEEECLSVSTEEGNQQSRSNRAEVDHVVKVYEYLMSHD 382
Query: 819 -MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
M + + V++ Y Q + ++ +G + + +V + + QG E D +I S VR
Sbjct: 383 KMDWDDVKVMSQYNAQCFAIRDALKKKGLINS------DVTTAVSSQGGEWDYVIFSAVR 436
Query: 878 --------SNDHQG-----IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
SN ++G +GF+ D ++NV LTRA+ GII+IGN +L W L+
Sbjct: 437 SLPKFRIESNRNKGWCKKNLGFITDAHQINVVLTRARKGIIIIGNKNLLQCDETWEALIK 496
Query: 925 FY 926
Y
Sbjct: 497 HY 498
>gi|9758800|dbj|BAB09253.1| DNA helicase-like [Arabidopsis thaliana]
Length = 750
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 288/612 (47%), Gaps = 79/612 (12%)
Query: 378 YFSLAKTDGDMRL-----MQGDELKLRY--SYDASKTWSGLGHVIKIPDNFGDEVGLELK 430
+ L K G+ RL GD + +R S A T G V + ++ G +G+ L+
Sbjct: 128 HLVLFKVGGNHRLPPTTLSPGDMVCIRVCDSRGAGATACTQGFVHNLGED-GCSIGVALE 186
Query: 431 SSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAVDDQSVSAYI 475
S G PT FS F KS DR+ + L+K + ++ S +
Sbjct: 187 SRHGDPT-----FSKLF-GKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSISV 240
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLPD------LNRSQVYAVKHAI--QRPLSLIQGP 527
L G D + +S L D + SQ A+ + +RP+ ++QGP
Sbjct: 241 VATLFGDGEDITWLEQNDYVDWSEAELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGP 300
Query: 528 PGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR---- 583
PGTGKT ++ V+Q G VLV AP+N AVD + EK+ GL +VRV +R
Sbjct: 301 PGTGKTGMLKEVITLAVQQ-GERVLVTAPTNAAVDNMVEKLLHLGLNIVRVGNPARISSA 359
Query: 584 -------EAIDSPVSFLALHNQIRNMEMNSELKKLLQ---LKEETGELSSADEKRYRMLK 633
E ++S ++ + + ++ +L++ L+ L +L K + +
Sbjct: 360 VASKSLGEIVNSKLASFRAELERKKSDLRKDLRQCLRDDVLAAGIRQLLKQLGKTLKKKE 419
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVILGAKQLI 692
K K +L NA V+ T +GA DP + +++ F ++IDE+ Q+ EP C +P++ G K+ I
Sbjct: 420 KETVKEILSNAQVVFATNIGAADPLIRRLETFDLVVIDEAGQSIEPSCWIPILQG-KRCI 478
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFPSNFF 750
L GD CQL PVV+ +KA GL SL ER L G+ +L QYRM+ ++ + S
Sbjct: 479 LSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIAGWASKEM 538
Query: 751 YEGSLQNGVCADERKLSKIDFPWP----VPDKPMLFYVTQ--------GQEE---IAGSG 795
Y G L++ L ID P+ + P++ T+ G EE AG+G
Sbjct: 539 YGGWLKSAPSVASHLL--IDSPFVKATWITQCPLVLLDTRMPYGSLSVGCEERLDPAGTG 596
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
+ Y N EA V I G+ P I V +PY Q L + + P + +
Sbjct: 597 SLY-NEGEADIVVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLD---DFP--VADGV 650
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
EVA++D+FQGRE D +I+S VRSN+ +GFL D RR+NVA+TRA+ + V+ + +
Sbjct: 651 EVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICH 710
Query: 916 QPLWNNLLNFYK 927
LL +
Sbjct: 711 NTFLARLLRHIR 722
>gi|440299116|gb|ELP91723.1| hypothetical protein EIN_520800 [Entamoeba invadens IP1]
Length = 1079
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 149/487 (30%), Positives = 231/487 (47%), Gaps = 75/487 (15%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
P H + P LN SQ+ AV ++ P + G + + Y + V
Sbjct: 374 PPHLNCP--VHLNLSQIAAV---LKTPSQRFK----RGHKHKRSQVDYNSFEDEDKKFYV 424
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSR-EAIDSPV---------------------- 590
A SN AV+ LTE++ + V R+ A + E + V
Sbjct: 425 TASSNNAVNVLTERLVDYKVNVFRIAANDKYEDLSDKVREVSLIYKAYEYAKNVRLVDIE 484
Query: 591 --------SFLALHNQIR--NMEMNSELKKLLQLKEETGE-----------------LSS 623
SF +I+ +ME+N L++ +T E L+
Sbjct: 485 KILKKKIDSFFTEKERIKINDMELNYNKDLTLKMHFKTFEKYFKVTEKDLFQRKQLSLNK 544
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
+ + KN K++ N DVI T + L +KF LIDE+ Q+ EPE
Sbjct: 545 TETSQMNDFMKNNLKNITMNCDVIAATLTKS----LSGVKFWCALIDEAAQSIEPETF-S 599
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+++++GD QL P ++ +A GL +S+FERL++ + L QY MHP +S
Sbjct: 600 AFAKVNKIVMIGDIQQLPPTILSDEAKEGGLEKSMFERLLLNKVPYVLLNTQYLMHPAIS 659
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE 803
KF + FFY G L +GV A+ER ++I+ + + P++F +G E SG SY N E
Sbjct: 660 KFSNEFFYRGKLNDGVTANERSDNRINKIFSKKEFPVMFVHCKGDEGYGSSGKSYGNDAE 719
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
V+ + ++ + G+ E+IG+I+PY QR L + ++ I+VASVD F
Sbjct: 720 KEVVKFLVEKYNKEGINDEEIGIISPYSTQRDLLGEQ-----------HKTIQVASVDGF 768
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QG EK+ II+SCVRSN GIGFL D RRLNVALTRA+ G++++G+ L ++ N +
Sbjct: 769 QGNEKEFIIISCVRSNSKGGIGFLADHRRLNVALTRARKGLVMVGDAYTLRHNCIFVNFM 828
Query: 924 NFYKEQK 930
++K
Sbjct: 829 KMVYDEK 835
>gi|393785219|ref|ZP_10373372.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
gi|392662922|gb|EIY56477.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
Length = 634
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 230/446 (51%), Gaps = 30/446 (6%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN +Q AV + + ++++ GPPGTGKT T +Y+ + + VLVCA SN A
Sbjct: 189 FPWLNSTQEEAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQ-VLVCAQSNTA 247
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL---ALHNQIRNMEMNSELKKLLQL--- 614
VD + EK+ G+ V+R+ +R D +SF N E+ S K + ++
Sbjct: 248 VDWIAEKLVDRGVPVLRIGNPTR-VNDKMLSFTYERRFENHPAYTELWSVRKSIREISGH 306
Query: 615 --KEETGELSSADEKRYRMLKKNAEKSLLDNAD------VICCTCVGAGDPRLLKIKFHS 666
K E S + R+ + E +L N D VI T V + L +F +
Sbjct: 307 IRKGNYSERESMRNRISRLRDRATELEILINEDLFSSARVIASTLVSSNHRILEGRRFST 366
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-L 725
+ IDE+ QA E C + I A ++I GDHCQL P + C +AAR GL Q+L E++V
Sbjct: 367 LFIDEAAQALEAACWI-AIRKADRVIFAGDHCQLPPTIKCIEAARGGLDQTLMEKVVTNK 425
Query: 726 GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT 785
+ L+VQYRM+ + +FPS +FY L++ R + D P D L +
Sbjct: 426 PVSVSLLKVQYRMNEAIMRFPSEWFYNNQLESAPEVRHRGILDYDTPMVWIDTSELEF-- 483
Query: 786 QGQEEIAGSGTSYVNRTEASN-VEKITTRFIRCG---MKPEQI--GVITPYEGQRAFLVQ 839
EE G +N+ EA ++++ R G + E+I G+I+PY+ Q +L
Sbjct: 484 --HEEFVGESFGRINKPEADLLIQELKNYIQRIGENRVFDERIDFGLISPYKAQVQYLRN 541
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
++ S + I + +VD FQG+E+D+I +S VR+N++ IGFLND RR+NVA+TR
Sbjct: 542 KIK-SSSFFRPFRELITINTVDGFQGQERDVIFISLVRANENGQIGFLNDLRRMNVAITR 600
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNF 925
A+ ++++G + L++ + L+ +
Sbjct: 601 ARMKLVILGEAQTLTRHAFYKKLMEY 626
>gi|431910166|gb|ELK13239.1| DNA-binding protein SMUBP-2 [Pteropus alecto]
Length = 984
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 236/487 (48%), Gaps = 44/487 (9%)
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLP-----DLNRSQVYAVKHAI-QRPLSLIQGPPG 529
YH ++ EVLF P S P L+ SQ AV A+ Q+ L++I GPPG
Sbjct: 155 YHSGPASSLIEVLFGGRAPSPASEIPPPVLINASLDASQKEAVSFALSQKELAIIHGPPG 214
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR------ 583
TGKT T I+ Q VKQ G VL CAPSN AVD L E++ R GL+V+R+ +R
Sbjct: 215 TGKTTTVVEIIVQAVKQ-GCKVLCCAPSNTAVDNLLERLARCGLRVLRLGHPARLLGSVQ 273
Query: 584 -----EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
E + S + + R++ K Q K E +L + + + L++ E
Sbjct: 274 QHCLDEVLARGDSAPIIADIRRDIYQALVKNKKTQDKRERSDLRNEVKLLRKELREREEA 333
Query: 639 SLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEPECMVPVILGAKQL 691
++L + AD + T GA D LK+ F ++IDE QA E C +P +L A++
Sbjct: 334 AMLQSLTAADAVLATNTGASDDGPLKLLPDSYFDMVVIDECSQALEASCWIP-LLKARKC 392
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFR-LEVQYRMHPELSKFPSNF 749
IL GDH QL P + KAA AGLS SL ERL G R L VQYRMH + ++ S
Sbjct: 393 ILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEAYGAGTVRTLTVQYRMHQAIMQWASEA 452
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQG---QEEIAGSGTSYVNRT 802
Y G L L D P + P+L T G E+ S N
Sbjct: 453 LYHGQLTAHPSVAGHLLR--DLPGVAATEETGIPLLLVDTAGCGLLEQEGDGDQSKGNPG 510
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
E V + G++ I VI+PY Q L Q + ++ + E+E+ SVD
Sbjct: 511 EVRLVGLHVQALVDAGVRASDIAVISPYNLQVDLLRQSLSHK-------HPELEIKSVDG 563
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
FQGREK+ +++S VRSN +GFL + RR+NVA+TRA+ + ++ + + +S L
Sbjct: 564 FQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVALVCDSRTVSNHAFLQTL 623
Query: 923 LNFYKEQ 929
+ ++ E
Sbjct: 624 VAYFTEH 630
>gi|30692868|ref|NP_198446.3| putative DNA-binding protein [Arabidopsis thaliana]
gi|332006651|gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 961
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 186/612 (30%), Positives = 288/612 (47%), Gaps = 79/612 (12%)
Query: 378 YFSLAKTDGDMRL-----MQGDELKLRY--SYDASKTWSGLGHVIKIPDNFGDEVGLELK 430
+ L K G+ RL GD + +R S A T G V + ++ G +G+ L+
Sbjct: 339 HLVLFKVGGNHRLPPTTLSPGDMVCIRVCDSRGAGATACTQGFVHNLGED-GCSIGVALE 397
Query: 431 SSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAVDDQSVSAYI 475
S G PT FS F KS DR+ + L+K + ++ S +
Sbjct: 398 SRHGDPT-----FSKLF-GKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSISV 451
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLPD------LNRSQVYAVKHAI--QRPLSLIQGP 527
L G D + +S L D + SQ A+ + +RP+ ++QGP
Sbjct: 452 VATLFGDGEDITWLEQNDYVDWSEAELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGP 511
Query: 528 PGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR---- 583
PGTGKT ++ V+Q G VLV AP+N AVD + EK+ GL +VRV +R
Sbjct: 512 PGTGKTGMLKEVITLAVQQ-GERVLVTAPTNAAVDNMVEKLLHLGLNIVRVGNPARISSA 570
Query: 584 -------EAIDSPVSFLALHNQIRNMEMNSELKKLLQ---LKEETGELSSADEKRYRMLK 633
E ++S ++ + + ++ +L++ L+ L +L K + +
Sbjct: 571 VASKSLGEIVNSKLASFRAELERKKSDLRKDLRQCLRDDVLAAGIRQLLKQLGKTLKKKE 630
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVILGAKQLI 692
K K +L NA V+ T +GA DP + +++ F ++IDE+ Q+ EP C +P++ G K+ I
Sbjct: 631 KETVKEILSNAQVVFATNIGAADPLIRRLETFDLVVIDEAGQSIEPSCWIPILQG-KRCI 689
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFPSNFF 750
L GD CQL PVV+ +KA GL SL ER L G+ +L QYRM+ ++ + S
Sbjct: 690 LSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIAGWASKEM 749
Query: 751 YEGSLQNGVCADERKLSKIDFPWP----VPDKPMLFYVTQ--------GQEE---IAGSG 795
Y G L++ L ID P+ + P++ T+ G EE AG+G
Sbjct: 750 YGGWLKSAPSVASHLL--IDSPFVKATWITQCPLVLLDTRMPYGSLSVGCEERLDPAGTG 807
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
+ Y N EA V I G+ P I V +PY Q L + + P + +
Sbjct: 808 SLY-NEGEADIVVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLD---DFP--VADGV 861
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
EVA++D+FQGRE D +I+S VRSN+ +GFL D RR+NVA+TRA+ + V+ + +
Sbjct: 862 EVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTICH 921
Query: 916 QPLWNNLLNFYK 927
LL +
Sbjct: 922 NTFLARLLRHIR 933
>gi|365759666|gb|EHN01443.1| Hcs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 682
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 170/540 (31%), Positives = 271/540 (50%), Gaps = 85/540 (15%)
Query: 439 ATTGFSVD--FIWKST---SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL 493
ATT +S + +I K+T ++ RM+ +RK + ++ + ++ + V+E LF +
Sbjct: 137 ATTFYSYNKLYILKTTNTVTYKRMESTMRKLS----EFTSPVQDKITQYLVNERLF---V 189
Query: 494 PKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL-VKQT 547
PK N+ P+LN SQ A+ A L++I GPPGTGKT ++ QL +K
Sbjct: 190 PKSGELQNVGSFLNPNLNDSQKAAINFATNNDLTIIHGPPGTGKTFALIELIQQLLIKNP 249
Query: 548 GSPVLVCAPSNIAVDQLTEKIH---------RTGLKVVRVCAKSREAIDSPVSFLALHNQ 598
+L+C PSNI+VD + E++ R G + + R ++D L+ N
Sbjct: 250 EKRILICGPSNISVDTILERLTPLVSNNLLLRIGHPARLLDSNKRHSLD----ILSKKNT 305
Query: 599 IRNMEMNSELKKLLQLKEETGELSSADEKR-----YRMLKKNAEK-------SLLDNADV 646
I +++ E+ KL+Q E +L + ++R ++L+K+ +K L+ + +
Sbjct: 306 IVR-DISQEIDKLIQ---ENKKLKNYKQRRENWNEIKLLRKDLKKREFKTIKDLIIQSRI 361
Query: 647 ICCTCVGAGDPRLLKIK--------FHSILIDESMQATEPECMVPVILGAKQ---LILVG 695
+ T G+ L + F +++IDE QA EP+C +P+I Q LIL G
Sbjct: 362 VVTTLHGSSSRELCSLYRNDPNVKLFDTLIIDEVSQAMEPQCWIPLIAHQNQFDKLILAG 421
Query: 696 DHCQLGPVVMCKKAARA--GLSQSLFERLVVLGIRPFR-----LEVQYRMHPELSKFPSN 748
D+ QL P + + L +LF+RL L I P R L +QYRM+ ++ +FPS
Sbjct: 422 DNKQLPPTIKTEDDQNVIRNLETTLFDRL--LKIFPKREMIKFLNIQYRMNEKIMEFPSQ 479
Query: 749 FFYEGSLQNGVCADERKL---SKIDFPWPVPDK-----PMLFYVTQGQE--EIAGSGT-- 796
Y G L R L S +D D P+++Y TQG E E A T
Sbjct: 480 SMYHGKLIADATVASRLLIDISSVDVSPSGDDDIDTKLPLIWYDTQGDEFPETADDATIL 539
Query: 797 -SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
S N E + V+K ++ + IGVI+PY Q + L + + + L I
Sbjct: 540 GSKYNEGEIAIVKKHIESLKSLNVQQDSIGVISPYNAQVSHLKRLIHDKLEL-----NNI 594
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
E+++VD FQGREKD+II+S VRSN+ +GFL + RRLNVA+TR + ++V+GN +VL +
Sbjct: 595 EISTVDGFQGREKDVIILSLVRSNEEFEVGFLKEERRLNVAMTRPRRQLVVVGNIEVLRR 654
>gi|15668275|ref|NP_247068.1| DNA-binding protein [Methanocaldococcus jannaschii DSM 2661]
gi|2498043|sp|Q57568.1|Y104_METJA RecName: Full=Uncharacterized ATP-dependent helicase MJ0104
gi|1590880|gb|AAB98084.1| DNA-binding protein, probably DNA helicase [Methanocaldococcus
jannaschii DSM 2661]
Length = 663
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 266/553 (48%), Gaps = 104/553 (18%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
VD +F RM+ ALR+FA + AYI +LG E R + F NL
Sbjct: 132 VDLYVNDITFKRMKEALREFARKRDKL-AYI---ILGIEHPEKPLREDIKLEFYDKNL-- 185
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
N SQ AVK A+ R L LI GPPGTGKT T ++ Q VK VL A SNIA D
Sbjct: 186 -NESQKLAVKKAVLSRDLYLIHGPPGTGKTRTITEVIVQEVKFNKHKVLATADSNIAADN 244
Query: 564 LTEKIHRT--GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
+ E + + LKVVRV +R + D L H+ +E + + +++L L+E+ E+
Sbjct: 245 ILEYLIKKYPDLKVVRVGHPTRISKD-----LIQHSLPYLIENHEKYQEILALREKIKEI 299
Query: 622 SS----------------ADE---------KRYR-------------MLKKNAEKSLLDN 643
+DE K YR +++ K +++N
Sbjct: 300 KEQRDKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKEKIVSMAEWIIRNKKIKRIINN 359
Query: 644 ---------------ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
ADVI T AG L +F I+IDE QA EP C++P++ G
Sbjct: 360 LDEITEKIMNEILAEADVIVATNSMAGSEILKGWEFDVIVIDEGSQAMEPSCLIPIVKGR 419
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-----LEVQYRMHPELS 743
K LI+ GDH QL P V+ + L ++LFERL I+ + LE+QYRM+ ++
Sbjct: 420 K-LIMAGDHKQLPPTVLSENEE---LKKTLFERL----IKKYPEFSSILEIQYRMNEKIM 471
Query: 744 KFPSNFFY------EGSLQNGVCAD---ERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
+FP+ FY + S++N D E ++ ++D + + P+ F +G E
Sbjct: 472 EFPNKMFYNNKLKADESVKNITLLDLVKEEEIDEVDRDI-INEIPVQFINVEGIERKDKE 530
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
SY N EA V +I + ++ + VITPY+ Q +L + + +
Sbjct: 531 SPSYYNIEEAEKVLEIVKKLVKYKI---PTNVITPYDAQVRYLRRLFEEHNI-------D 580
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
IEV +VD FQGRE + I++S VR+ + GFL D RRLNVA+TRAK +I+IGN +L
Sbjct: 581 IEVNTVDGFQGRENEAIVISFVRT---KNFGFLKDLRRLNVAITRAKRKLILIGNENLLK 637
Query: 915 KQPLWNNLLNFYK 927
+ ++N ++ + K
Sbjct: 638 QDKVYNEMIKWAK 650
>gi|365764213|gb|EHN05738.1| Sen1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 2101
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 1205 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1264
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 1265 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 1322
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 1323 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1382
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 1383 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1442
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1443 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1502
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 1503 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 1559
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 1560 QLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 1619
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 1620 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 1676
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 1677 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 1736
Query: 940 LKESLI 945
+S++
Sbjct: 1737 RAQSIL 1742
>gi|222445377|ref|ZP_03607892.1| hypothetical protein METSMIALI_01005 [Methanobrevibacter smithii
DSM 2375]
gi|222434942|gb|EEE42107.1| putative DNA helicase [Methanobrevibacter smithii DSM 2375]
Length = 658
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 257/528 (48%), Gaps = 92/528 (17%)
Query: 481 GHNVDEVLFRCHLPKHFSAPNLPD-----LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTV 534
G N E + PK D LN SQ AV++A+ LI GP GTGKT
Sbjct: 143 GKNALEYSLKKRAPKENKKEKYIDFIDKSLNESQKNAVRNAVNTENFFLIHGPFGTGKTR 202
Query: 535 TSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTG-LKVVRVCAK---SREAIDSPV 590
T ++ Q V+Q+ + VLV A SN AVD + +++ + LK+ R+ S+E I +
Sbjct: 203 TLVELIQQEVRQS-NKVLVTAESNSAVDNILDRLSQNKKLKITRLGHPQRVSKENIAYSL 261
Query: 591 SFLALHNQIRNMEMNSELKKLLQLKEETGELSS--------------------------- 623
++ A ++Q+ ++N K++ Q+ E +
Sbjct: 262 AYKAENHQLTG-KINKNYKRIEQISETRDRFTKPTPQYRRGFSDSDILYNASKGKGGRGI 320
Query: 624 -------------ADEK------RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF 664
+EK + + L+ K +++++D+I T A + + KF
Sbjct: 321 SSSKMESMANWLLENEKISEIHYKIKKLENKIVKDIINSSDIILSTNSTAAIEEIARTKF 380
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
+ +++DE+ QAT P ++P + A++ IL GDH QL P ++ KKA L ++LFE L+
Sbjct: 381 NVVIVDEASQATIPSILIP-LSKARRFILAGDHKQLPPTIISKKAH--FLEKTLFEELIK 437
Query: 725 -LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI------------DF 771
+ L VQYRM+ L KFP++ FY G+L++ D+ L +I D
Sbjct: 438 KYPNKSSLLNVQYRMNSFLMKFPNSEFYNGNLKSDSSVDDINLDEIIDLEELSRLKESDV 497
Query: 772 PWPVPD--KPMLFYVT----QGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIG 825
+ + KP+LF T +E+ S +N++EA I ++ G+ P+ IG
Sbjct: 498 EKQLHNNLKPLLFIDTSNLKNNEEKHLKDSKSIINQSEADIATSIAKFYLGTGINPKDIG 557
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
+I+PY Q + Q +P IEV SVD FQGREK++II+S VRSN ++ IG
Sbjct: 558 IISPYADQVNLI------QDKIP------IEVKSVDGFQGREKEIIIISTVRSNKNKDIG 605
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
FL D RRLNVA+TRAK +IVIGN L ++ L+ F + +L+
Sbjct: 606 FLKDLRRLNVAITRAKRKLIVIGNKNTLKGNSTYSKLIKFCAKNDLLI 653
>gi|190405466|gb|EDV08733.1| nuclear-localized tRNA splicing complex component [Saccharomyces
cerevisiae RM11-1a]
Length = 2231
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 1335 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1394
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 1395 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 1452
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 1453 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1512
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 1513 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1572
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1573 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1632
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 1633 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 1689
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 1690 QLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 1749
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 1750 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 1806
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 1807 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 1866
Query: 940 LKESLI 945
+S++
Sbjct: 1867 RAQSIL 1872
>gi|225432728|ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
gi|297737082|emb|CBI26283.3| unnamed protein product [Vitis vinifera]
Length = 877
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 289/635 (45%), Gaps = 115/635 (18%)
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL---AKTDGDMRLMQ 392
Y++ F L+ +E + S E VT+R +K + +L + L+
Sbjct: 241 YESYFKTLLIMEEIRMEEDMRSYDMERVTMR------RKGTQFLTLEVPGLAEKRPSLVH 294
Query: 393 GDELKLRYSY----DASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFI 448
GD + + +Y D S + G H ++ ++V L GF+ +FI
Sbjct: 295 GDYIFAKLAYEDENDLSPPYQGFIHRVE-----AEQVYL--------------GFAKEFI 335
Query: 449 WKSTS-------FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC-HLPKHFSAP 500
W T F ++ +R+ S L + L + H+ P
Sbjct: 336 WHHTDESLYNVRFTYNRVNMRRLYQAIDSAKGLEMDLLFPSDSRRRLIKATHM-----VP 390
Query: 501 NLPDLNRSQVYAVKHAIQ---RPLSLIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAP 556
+LN Q++++K + P +I GPPGTGKT T + QL + Q + +LVCAP
Sbjct: 391 ISFNLNEEQIFSIKMILGCRGAPPYVIHGPPGTGKTKTMVEAILQLYLTQKNTRILVCAP 450
Query: 557 SNIAVDQLTEK------IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKK 610
SN A D L E+ + G ++ R+ A SR D F IR + K
Sbjct: 451 SNSAADHLLERLLAEKAVEVQGNEIFRLNATSRPYEDMNPDF------IRFCFSEDLIFK 504
Query: 611 LLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
L D KRYR++ + L A+ + + F IL+D
Sbjct: 505 CPPLN---------DLKRYRIIISTYMSAALLYAEGV------------KRSHFSHILLD 543
Query: 671 ESMQATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
E+ QA+EPE M+P+ ++ ++L GD QLGPV+ K A L +S ERL
Sbjct: 544 EAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERLFECEF 603
Query: 728 RP-------FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVP 776
+L YR HPE+ PS FY+G L C D++ S W P
Sbjct: 604 YHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIP--CKDDKSSS---MTWAEILPNR 658
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF-IRCGMKPEQIGVITPYEGQRA 835
D P+LF QG +E GS S+ NRTEAS V +I + I ++ E IGVITPY Q
Sbjct: 659 DFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQVL 718
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS-------NDHQGIGFLN 888
L + ++ +PA I+V SV+ FQG+E+++II+S VRS + + +GFL+
Sbjct: 719 KLKKALE-GVDMPA-----IKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLS 772
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
+PRR NVA+TRAK +I+IGNP ++SK WN +L
Sbjct: 773 NPRRFNVAITRAKSLLIIIGNPHIISKDLYWNKIL 807
>gi|320580709|gb|EFW94931.1| Hexameric DNA polymerase alpha-associated DNA helicase A [Ogataea
parapolymorpha DL-1]
Length = 712
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 166/527 (31%), Positives = 266/527 (50%), Gaps = 81/527 (15%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP--------- 503
+++RM+ +RK D ++ + +LG + F +PNL
Sbjct: 176 TYNRMESTMRKLGELDSDTASELVKLVLGKSA------------FISPNLKYQKTKLNWF 223
Query: 504 --DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV----KQTGSP-VLVCAP 556
+LN SQ AV+ ++ LS+I GPPGTGKT T +V QLV + GS +L+C P
Sbjct: 224 NGNLNDSQKNAVQFSLVSNLSIIHGPPGTGKTSTIVELVKQLVLRKRESEGSKRILICGP 283
Query: 557 SNIAVDQLTEKIHR--TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQ- 613
SNI++D + E++ + K R+ A P + I E LK +LQ
Sbjct: 284 SNISIDTILERLSSFFSDNKYSRLVRIGHPARMLPQILRHSLDLITESESGEILKDILQE 343
Query: 614 ---LKEETGELSSADEKR------------YRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
L + + S E+R R+ K A +L N++V+ T G+
Sbjct: 344 INQLTRKIKKTKSYRERRELYQTIKELKKDLRLRSKKAYSDVLSNSEVVAATLHGSSARE 403
Query: 659 LLK-IK-----FHSILIDESMQATEPECMVPVIL--GAKQLILVGDHCQLGPVVMCKKAA 710
++ I+ F +I+IDE QA EP C +P++ KQL++ GD+ QL P + KK A
Sbjct: 404 IVNCIRERGDLFDTIIIDEVSQALEPSCWIPLMYHQSLKQLVIAGDNKQLSPTIKTKKNA 463
Query: 711 RA--GLSQSLFERLVVL--GIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
+ LS++LF+RL+ + + F L++QYRM+ ++ F S+ Y G L +
Sbjct: 464 KVVNTLSKTLFDRLIEVHKNHQEFTCFLDIQYRMNKKIMSFFSDALYGGKLIAHSSVENI 523
Query: 765 KLSKIDFPW---PVPD---KPMLFYVTQG---------QEEIAGSGTSYVNRTEASNVEK 809
KLS D P+ P D + +++Y TQG +++ AG S N E V K
Sbjct: 524 KLS--DLPYVKSPQDDNVAEEVIWYDTQGGDYPEADSAEDDSAGLQASRYNDGECLVVLK 581
Query: 810 ITTRFIR-CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
+ +K E IG+I+PY Q + L + ++ + P + +IE+++VD FQGREK
Sbjct: 582 HVRSLVEDHNVKQEDIGIISPYSAQVSSLRKLLREETEHP---FPDIEISTVDGFQGREK 638
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
++II+S VRSND +GFLND RR+NV+++RAK + V+G+ + +S+
Sbjct: 639 EVIILSLVRSNDSHDVGFLNDYRRMNVSISRAKRQLCVVGDMETISE 685
>gi|344304991|gb|EGW35223.1| hypothetical protein SPAPADRAFT_53535 [Spathaspora passalidarum
NRRL Y-27907]
Length = 685
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/499 (34%), Positives = 266/499 (53%), Gaps = 52/499 (10%)
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
S ++ RM + K S I+ LLG E + H HF LN SQ
Sbjct: 165 SITYKRMISTMNKVNELQPSDKNDIHKLLLG----ESSYISHQNNHFITFFNSHLNDSQK 220
Query: 511 YAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI- 568
A++ AI + +++I GPPGTGKT T ++ QL G VLVC PSNI+VD + E++
Sbjct: 221 QAIEFAINKSNITIIHGPPGTGKTYTLIELIQQLT-NLGEKVLVCGPSNISVDTILERLG 279
Query: 569 --HRTGLKVVRVCAKSREAIDSPVSF---LALHNQ------IRNME--MNSELKKLLQLK 615
+++G +++R+ +R PV+ L + ++ I ++E ++S L K+ + K
Sbjct: 280 DKYKSG-QLIRIGHPARLL---PVNLQHSLEILSKSYGREIISDIEHDISSTLTKIRKCK 335
Query: 616 E--ETGELSSADEKRYRMLKKNAEK---SLLDNADVICCTCVGAG--DPRLLKIKFHSIL 668
E EL + R LK+ +K LL NA V+ T G+G + R + F +I+
Sbjct: 336 RYAERRELYQELKLLKRELKQREKKIVHELLINARVVVATLHGSGSYELRTNDLAFDTII 395
Query: 669 IDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVM-CKKAARAGLSQSLFERLVVL 725
IDE Q+ EP+C +P++L K +L++ GD+ QL P V K+ + L +LF+RLV+
Sbjct: 396 IDEVSQSMEPQCWIPLLLNTKFKRLVIAGDNMQLPPTVKSVKRKGSSILETTLFDRLVLK 455
Query: 726 GI-RPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PM 780
G F+ L+VQYRM+ + FP+ Y L++ + LS++ D
Sbjct: 456 GEGNKFKKLLDVQYRMNTSIMMFPNMQLYSNKLKSDSSVENITLSELPGVEENDDTLCKC 515
Query: 781 LFYVTQGQE---EIAGS--GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRA 835
++Y TQG E +++ S G S N E V + + G++P+ IGVI PY Q
Sbjct: 516 IWYDTQGGEFPEQVSESVEGDSKYNEMELLVVRGHIEKLLSDGVQPKDIGVIAPYAAQVQ 575
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L + M + EIE+++VD FQGREK++II++ VRSN+ + IGFL+D RRLNV
Sbjct: 576 LLKKQMGPE--------TEIEISTVDGFQGREKEVIILTLVRSNESREIGFLSDQRRLNV 627
Query: 896 ALTRAKYGIIVIGNPKVLS 914
A+TR K + VIG+ +++S
Sbjct: 628 AITRPKRQLCVIGDLELMS 646
>gi|443894317|dbj|GAC71665.1| tRNA-splicing endonuclease positive effector [Pseudozyma antarctica
T-34]
Length = 2923
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 172/520 (33%), Positives = 253/520 (48%), Gaps = 107/520 (20%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSP------------------VLVCAPSNIAVD 562
SLIQGPPGTGKT T ++ V P +L+CAPSN A+D
Sbjct: 1487 FSLIQGPPGTGKTKTICALIGAFVSNRKGPSTSVQAGQAQGKVGATKKILLCAPSNAAID 1546
Query: 563 QLTEKIHRTGL----------KVVRVCAKSREAI---DSPVSFL---------------- 593
++ ++ R G+ KVVRV + D + +L
Sbjct: 1547 EVAKRA-RAGMRLADGKTFHPKVVRVGRDDSMNVSVKDISLDYLIDQRLESGGAFDANRN 1605
Query: 594 -------ALHNQIRNMEMNSELKK--------------LLQLKEET--------GELSSA 624
ALH +I +++M E K+ + QL+ E G +S
Sbjct: 1606 KAGADPSALHAEIHSLKMQREQKQAELSEARGSGAQTLVTQLEAEIRNLSAKRLGVMSKL 1665
Query: 625 DEKRYRML---------KKNAEKSLLDNADVICCTCVGAGDPRLLKIKF--HSILIDESM 673
DE + + ++ A +L +ADVIC T GAG L + F +++IDE+
Sbjct: 1666 DEAKDKQQSAHRQREADRRRARMEILGDADVICTTLSGAGHEMLAGVAFDFETVVIDEAA 1725
Query: 674 QATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-L 732
QA E M+P+ G KQ I+VGD QL P V+ ++A + G SQSLF R+ + L
Sbjct: 1726 QAVELSSMIPLRYGCKQCIMVGDPNQLPPTVISQQAEKLGYSQSLFVRMFEKAPQAVHLL 1785
Query: 733 EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--KPMLFYVTQGQEE 790
+QYRMHPE+S FPS FY+ L +G D +L++ PW + +P F T+ E
Sbjct: 1786 SIQYRMHPEISVFPSKAFYDSKLLDG--PDMAELTRQ--PWHKYELTRPFKFLSTKAPES 1841
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPE----QIGVITPYEGQRAFLVQHMQYQGS 846
G S +NR EA NV +R E +IG++T Y+ Q F ++ +Q
Sbjct: 1842 -PGRFHSIINREEA-NVALALYERLRTDHPRENFDYRIGIVTMYKAQ-VFELRRT-FQQR 1897
Query: 847 LPAKIYQEIEVASVDAFQGREKDLIIMSCVRS-NDHQGIGFLNDPRRLNVALTRAKYGII 905
I + I+ +VD FQG+EKD+II+SCVRS ++ + IGFL+D RRLNVA+TRAK +
Sbjct: 1898 YGQDIVERIDFNTVDGFQGQEKDIIILSCVRSASEPRSIGFLSDRRRLNVAVTRAKSNLF 1957
Query: 906 VIGNPKVLSK-QPLWNNLLNFYKEQKVLVEGPLNNLKESL 944
VIGN + L + +W +L+ EQ+ V+ P+ +L L
Sbjct: 1958 VIGNAEHLRRGDAIWESLVA-TAEQRGAVQ-PITHLISQL 1995
>gi|151940946|gb|EDN59328.1| splicing endonuclease [Saccharomyces cerevisiae YJM789]
Length = 2232
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 1336 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1395
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 1396 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 1453
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 1454 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1513
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 1514 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1573
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1574 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1633
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 1634 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 1690
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 1691 QLEPFAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 1750
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 1751 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 1807
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 1808 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 1867
Query: 940 LKESLI 945
+S++
Sbjct: 1868 RAQSIL 1873
>gi|172574|gb|AAB63976.1| SEN1 [Saccharomyces cerevisiae]
Length = 2112
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 1216 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1275
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 1276 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 1333
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 1334 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1393
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 1394 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1453
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1454 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1513
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 1514 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 1570
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 1571 QLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 1630
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 1631 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 1687
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 1688 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 1747
Query: 940 LKESLI 945
+S++
Sbjct: 1748 RAQSIL 1753
>gi|289192489|ref|YP_003458430.1| DNA helicase [Methanocaldococcus sp. FS406-22]
gi|288938939|gb|ADC69694.1| DNA helicase [Methanocaldococcus sp. FS406-22]
Length = 647
Score = 208 bits (530), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 268/549 (48%), Gaps = 94/549 (17%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
VD +F RM+ ALR+FA + AYI +LG E R ++ F NL
Sbjct: 122 VDLYVNDITFKRMKEALREFARKRDKL-AYI---ILGIEHPEKPLRENIKLEFYDKNL-- 175
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
N SQ AVK A+ + L LI GPPGTGKT T ++ Q V+ VL A SNIA D
Sbjct: 176 -NESQKIAVKKAVLSKDLYLIHGPPGTGKTRTITEVIVQEVRFNKHKVLATADSNIAADN 234
Query: 564 LTEKIHRT--GLKVVRV---CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
+ E + + LKVVRV S++ I + +L + N + E+ S +K+ ++KE+
Sbjct: 235 ILEYLIKKYPDLKVVRVGHPTRISKDLIQHSLPYL-IENHEKYQEILSLREKIKEIKEQR 293
Query: 619 GEL---------SSADE---------KRYR-------------MLKKNAEKSLLDN---- 643
+ +DE K YR +++ K +++N
Sbjct: 294 DKFLKPSPRWRRGMSDEQILKVAKRKKSYRGIPKEKIISMAEWIIRNRKIKRIINNLDEI 353
Query: 644 -----------ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLI 692
ADVI T AG L +F ++IDE QA EP C++P++ G K+LI
Sbjct: 354 TEKIMNEILSEADVIVSTNSMAGSEILKGWEFDVVVIDEGSQAMEPSCLIPIVKG-KKLI 412
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-----LEVQYRMHPELSKFPS 747
+ GDH QL P V+ + L ++LFERL I+ + LE+QYRM+ ++ +FP+
Sbjct: 413 MAGDHKQLPPTVLSENEE---LKKTLFERL----IKKYPEFSSILEIQYRMNEKIMEFPN 465
Query: 748 NFFYEG------SLQNGVCADERKLSKIDFPWP--VPDKPMLFYVTQGQEEIAGSGTSYV 799
FY+ S++N D K +ID + + P+ F +G E SY
Sbjct: 466 KMFYDNKLKADESVKNITLLDLVKEEEIDEADRDIINEIPVQFIHVEGVERKDKESPSYY 525
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
N EA V ++ + ++ + VITPY+ Q +L + + +IEV +
Sbjct: 526 NIEEAEKVLEVVKKLVKYKI---PTNVITPYDAQVRYLRRMFEEHNI-------DIEVNT 575
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VD FQGRE + I++S VR+ + GFL D RRLNVA+TRAK +I+IGN +L + ++
Sbjct: 576 VDGFQGRENEAIVISFVRT---KNFGFLRDLRRLNVAITRAKRKLILIGNEHLLKQDKVY 632
Query: 920 NNLLNFYKE 928
N ++ + +E
Sbjct: 633 NEMIKWARE 641
>gi|366996476|ref|XP_003678001.1| hypothetical protein NCAS_0H03440 [Naumovozyma castellii CBS 4309]
gi|342303871|emb|CCC71654.1| hypothetical protein NCAS_0H03440 [Naumovozyma castellii CBS 4309]
Length = 681
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 271/554 (48%), Gaps = 74/554 (13%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKST---SFDRMQLALRKFAVDD 468
G V+K+ + ++ + L+ S F+ + K+T ++ RM+ +RK A D
Sbjct: 125 GVVLKLSEQ---QITITLEESQEQEATKLYAFNRLHLLKTTNTITYKRMESTMRKLAEFD 181
Query: 469 QSVSAYIYHRLLGH-------NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPL 521
+ I LL N D++ F N P+LN+SQ A+K A+ +
Sbjct: 182 GVPNNKIVQYLLNERPFIKQTNSDKITF-----------NNPNLNKSQTDAIKFALANDI 230
Query: 522 SLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT--GLKVVRVC 579
S+I GPPGTGKT T ++ QLV + G VLVC PSNI+VD + E++ + G ++R+
Sbjct: 231 SIIHGPPGTGKTYTLIELIQQLVAK-GQRVLVCGPSNISVDTILERLSKALPGNLLLRIG 289
Query: 580 AKSR---EAIDSPVSFLALHNQ----IRNMEMN-----SELKKLLQLKEETGELSSADE- 626
+R + + L+ ++++ + S++KK+ K+ E
Sbjct: 290 HPARLLESNLSHSLDILSRSGDAGAIVKDIYHDIDKTISDIKKIKSWKDRKEAWRDVKEL 349
Query: 627 -KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------FHSILIDESMQATEPE 679
K R+ +K L+ A V+ T G+ L +I F +++IDE Q+ EP+
Sbjct: 350 RKELRVREKKVVNDLILEAKVVVATLHGSSSRELCRIYDQVPHLFDTLIIDEVSQSLEPQ 409
Query: 680 CMVPVILGAK----QLILVGDHCQLGPVVMCK--KAARAGLSQSLFERLVVLGIRPFR-- 731
C +P+I K +L+L GD+ QL P + + K + L +LF+RLV F+
Sbjct: 410 CWIPLISHYKSDISKLVLAGDNKQLPPTIKTEDDKKTQLILGTTLFDRLVKHYGDSFKQL 469
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQG 787
L VQYRM+ ++ +F S Y+G L L+ D P + P+++Y TQG
Sbjct: 470 LNVQYRMNEDIMEFSSQEMYDGKLLADASVATNVLT--DLPGVENNDDTTVPLIWYDTQG 527
Query: 788 QEEI------AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
+ I G +S N EA V+ + I + IG+I+PY Q + +
Sbjct: 528 DDYIETAEQDEGIISSKFNENEALLVKHHVIKLIESNVPQTAIGIISPYSAQVSLI---- 583
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
L + Y IE+++VD FQGREK++II+S VRSND +GFL D RRLNVA+TR K
Sbjct: 584 ---KKLIREDYPLIEISTVDGFQGREKEVIILSLVRSNDKFEVGFLKDERRLNVAMTRPK 640
Query: 902 YGIIVIGNPKVLSK 915
+ V+GN + L +
Sbjct: 641 KQLCVVGNIECLER 654
>gi|67901330|ref|XP_680921.1| hypothetical protein AN7652.2 [Aspergillus nidulans FGSC A4]
gi|40742648|gb|EAA61838.1| hypothetical protein AN7652.2 [Aspergillus nidulans FGSC A4]
gi|259483986|tpe|CBF79824.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_2G01090)
[Aspergillus nidulans FGSC A4]
Length = 686
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 238/499 (47%), Gaps = 79/499 (15%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCHLPKHFSAPNLPDLNRSQVY 511
+F RM + K A +S + GH + + P F P L N SQ
Sbjct: 198 TFRRMNQTMEKMAKMSESDYTHFVRVAFGHTTPVQPDYEAAGPVEFIDPTL---NDSQKE 254
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ Q+VK+ VLVC PSNI+VD + E++
Sbjct: 255 AIQFALASRDIALIHGPPGTGKTHTLIELIIQMVKRNLR-VLVCGPSNISVDNIVERLAP 313
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLAL------------------HNQIRNMEMNSELK 609
+ + VVR+ +R +D + L H IR E +
Sbjct: 314 SKIPVVRIGHPARLLPSVLDHSLEVLTQTSDAAAIVRDVRKEIDEKHASIRKTRFGREKR 373
Query: 610 KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
+ Q ++ + K + +L+ + V+ T GAG +L KF ++I
Sbjct: 374 AIYQ------DIRELRREFRERESKCVD-NLVRGSSVVLATLHGAGGHQLKNQKFDVVII 426
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM-----CKKAARAG---------LS 715
DE+ QA E +C +P +L A +++L GDH QL P V K+A G L
Sbjct: 427 DEASQALEAQCWIP-LLSAPKVVLAGDHLQLPPTVKSTPHKTKEAGEDGEQDANGSFSLE 485
Query: 716 QSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
++LF+RL+ L GI+ L QYRMH + +FPS+ YE L R L D P
Sbjct: 486 KTLFDRLLSLHGPGIKRM-LTTQYRMHENIMRFPSDELYESKLIAAESVKSRLLK--DLP 542
Query: 773 WPVPD-----KPMLFYVTQG--------QEEIAGS----GTSYVNRTEASNVEKITTRFI 815
+ V + +P++F+ TQG EE A G S N EA V + +
Sbjct: 543 YNVHETDDTKEPVVFWDTQGGDFPEKVDDEEFAKKESLLGESKSNEMEALVVARHVDNLV 602
Query: 816 RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
+ G++PE I VITPY GQ A L Q ++ + Y ++E+ SVD FQGREK+ +++S
Sbjct: 603 QAGVRPEDIAVITPYNGQLAVLSQMLREK-------YPDLELGSVDGFQGREKEAVVVSL 655
Query: 876 VRSNDHQGIGFLNDPRRLN 894
VRSN +GFL + RRLN
Sbjct: 656 VRSNSEHEVGFLGEKRRLN 674
>gi|256271104|gb|EEU06199.1| Sen1p [Saccharomyces cerevisiae JAY291]
Length = 2231
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 1335 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1394
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 1395 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 1452
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 1453 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1512
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 1513 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1572
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1573 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1632
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 1633 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 1689
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 1690 QLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 1749
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 1750 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 1806
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 1807 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 1866
Query: 940 LKESLI 945
+S++
Sbjct: 1867 RAQSIL 1872
>gi|398366241|ref|NP_013534.3| putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|3123282|sp|Q00416.2|SEN1_YEAST RecName: Full=Helicase SEN1; AltName: Full=tRNA-splicing endonuclease
positive effector
gi|664872|gb|AAB67502.1| Sen1p [Saccharomyces cerevisiae]
gi|285813835|tpg|DAA09731.1| TPA: putative DNA/RNA helicase SEN1 [Saccharomyces cerevisiae S288c]
gi|392297931|gb|EIW09030.1| Sen1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 2231
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 1335 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1394
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 1395 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 1452
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 1453 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1512
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 1513 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1572
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1573 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1632
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 1633 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 1689
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 1690 QLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 1749
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 1750 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 1806
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 1807 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 1866
Query: 940 LKESLI 945
+S++
Sbjct: 1867 RAQSIL 1872
>gi|259148407|emb|CAY81654.1| Sen1p [Saccharomyces cerevisiae EC1118]
Length = 2230
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 1334 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1393
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 1394 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 1451
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 1452 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1511
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 1512 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1571
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1572 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1631
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 1632 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 1688
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 1689 QLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 1748
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 1749 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 1805
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 1806 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 1865
Query: 940 LKESLI 945
+S++
Sbjct: 1866 RAQSIL 1871
>gi|147866733|emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
Length = 877
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 289/635 (45%), Gaps = 115/635 (18%)
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSL---AKTDGDMRLMQ 392
Y++ F L+ +E + S E VT+R +K + +L + L+
Sbjct: 241 YESYFKTLLIMEEIRMEEDMRSYDMERVTMR------RKGTQFLTLEVPGLAEKRPSLVH 294
Query: 393 GDELKLRYSY----DASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFI 448
GD + + +Y D+S + G H ++ ++V L GF+ +FI
Sbjct: 295 GDYIFAKLAYEDENDSSPPYQGFIHRVE-----AEQVYL--------------GFAREFI 335
Query: 449 WKSTS-------FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC-HLPKHFSAP 500
W T F ++ +R+ S L + L + H+ P
Sbjct: 336 WHHTDESLYNVRFTYNRVNMRRLYQAIDSAKGLEMDLLFPSDSRRRLIKATHM-----VP 390
Query: 501 NLPDLNRSQVYAVKHAIQ---RPLSLIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAP 556
+LN Q++++K + P +I GPPGTGKT T + QL + Q + +LVCAP
Sbjct: 391 ISFNLNEEQIFSIKMILGCRGAPPYVIHGPPGTGKTKTLVEAILQLYLTQKNTRILVCAP 450
Query: 557 SNIAVDQLTEK------IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKK 610
SN A D L E+ + G ++ R+ A SR D F IR + K
Sbjct: 451 SNSAADHLLERLLAEKAVEVQGNEIFRLNATSRPYEDMNPDF------IRFCISEDLIFK 504
Query: 611 LLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
L D KRYR++ + L A+ + + F IL+D
Sbjct: 505 CPPLN---------DLKRYRIIISTYMSAALLYAEGV------------KRSHFSHILLD 543
Query: 671 ESMQATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
E+ QA+EPE M+P+ ++ ++L GD QLGPV+ K A L +S ERL
Sbjct: 544 EAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERLFECEF 603
Query: 728 RP-------FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW----PVP 776
+L YR HPE+ PS FY+G L C D + S W P
Sbjct: 604 YHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIP--CKDXKSSS---MTWAEILPNR 658
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRF-IRCGMKPEQIGVITPYEGQRA 835
D P+LF QG +E GS S+ NRTEAS V +I + I ++ E IGVITPY Q
Sbjct: 659 DFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQVL 718
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS-------NDHQGIGFLN 888
L + ++ +PA I+V SV+ FQG+E+++II+S VRS + + +GFL+
Sbjct: 719 KLKKALE-GVDMPA-----IKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLS 772
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
+PRR NVA+TRAK +I+IGNP ++SK WN +L
Sbjct: 773 NPRRFNVAITRAKSLLIIIGNPHIISKDLYWNKIL 807
>gi|349580123|dbj|GAA25284.1| K7_Sen1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 2233
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 168/546 (30%), Positives = 266/546 (48%), Gaps = 113/546 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L + S
Sbjct: 1337 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1396
Query: 551 -----------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCAKSREAIDSPV 590
+L+CAPSN AVD++ ++ H+ ++VRV + ++ +
Sbjct: 1397 SNTEQLLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRS--DVVNVAI 1454
Query: 591 SFLALHNQI------RNME-----------------------------------MNSELK 609
L L + RN E M++E
Sbjct: 1455 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1514
Query: 610 KLLQLK---------------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
LQLK +E E +S + + + ++NA+ +L +D+IC T G+
Sbjct: 1515 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1574
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1575 AHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASNF 1634
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D L+K +
Sbjct: 1635 KYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMD--ILNKRPWH 1691
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E + F + K + +IG+I
Sbjct: 1692 QLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGKIGII 1751
Query: 828 TPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SCVR++D + +G
Sbjct: 1752 SPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVG 1808
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG------PLNN 939
FL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L P NN
Sbjct: 1809 FLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAYACSGFLDPRNN 1868
Query: 940 LKESLI 945
+S++
Sbjct: 1869 RAQSIL 1874
>gi|367021720|ref|XP_003660145.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
gi|347007412|gb|AEO54900.1| hypothetical protein MYCTH_2298080 [Myceliophthora thermophila ATCC
42464]
Length = 2059
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 251/524 (47%), Gaps = 100/524 (19%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV----KQTGSPV-------- 551
LN Q A+ +A + +LIQGPPGTGKT T +V L+ K + + V
Sbjct: 1321 LNPGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSSNAVPLSRPGAA 1380
Query: 552 ----------LVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVSFL 593
LVCAPSN AVD+L ++ + G+K + V R +AI++ V +
Sbjct: 1381 SANQAPSKKLLVCAPSNAAVDELVLRL-KAGVKTMNGTFHKIEVLRLGRSDAINAAVKDV 1439
Query: 594 ALHNQIR---NMEMN----SELKKLLQ----LKEETGELS-------SADEKRYRML--- 632
L ++ + E+N S+ +KL Q LKE+ EL ++D + + M
Sbjct: 1440 TLDELVKARLDSEINNSGPSDREKLHQEAGQLKEKIAELRPQLEAARASDNRAFTMKLQR 1499
Query: 633 ---------------------------------KKNAEKSLLDNADVICCTCVGAGDPRL 659
++ ++ +LD A V+C T G+G
Sbjct: 1500 EFDELKRRQAHIGAQIDANKNDGNTFAREVEIKRRQIQQEILDKAQVLCATLSGSGHEMF 1559
Query: 660 --LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR G QS
Sbjct: 1560 KNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQS 1619
Query: 718 LFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
LF R+ + L ++QYRMHPE+S+FPS FYEG LQ+G +L PW
Sbjct: 1620 LFVRMQKNHAKDVHLLDMQYRMHPEISRFPSQEFYEGLLQDGADMGRLRLQ----PWHES 1675
Query: 777 D--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYE 831
+ P F+ +G + S VN E ++ RF K E +IG+ITPY+
Sbjct: 1676 ELLGPYRFFDVKGSQSRGPKNQSLVNEEELKVAMQLYRRFRTDYGKVELKGKIGIITPYK 1735
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
Q L Q ++ I +EIE + DAFQGRE ++II SCVR++ GIGF+ D R
Sbjct: 1736 AQLLRLRQ--RFTEKYGEGITEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIR 1793
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
R+NV LTRAK + ++G+ + L + W+ L+ K + G
Sbjct: 1794 RMNVGLTRAKSSLWILGDSRALVQGEFWSKLIEDAKRRDRYTSG 1837
>gi|71016830|ref|XP_758928.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
gi|46098459|gb|EAK83692.1| hypothetical protein UM02781.1 [Ustilago maydis 521]
Length = 3036
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 165/506 (32%), Positives = 247/506 (48%), Gaps = 106/506 (20%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSP------------------VLVCAPSNIAVD 562
SLIQGPPGTGKT T ++ V P +L+CAPSN A+D
Sbjct: 1489 FSLIQGPPGTGKTKTICALIGAFVSSRKGPTTSIQAGQNQGKLGATKKILLCAPSNAAID 1548
Query: 563 QLTEKIHRTGL----------KVVRVCAKSREAI---DSPVSFL---------------- 593
++ ++ R G+ K+VR+ + D + +L
Sbjct: 1549 EVAKRA-RAGIRLADGKVIHPKIVRMGRDDTMNVSVKDIALEYLIDQRLEGSGAFDNHRN 1607
Query: 594 --------ALHNQIRNMEMNSELKKL--------------LQLKEET--------GELSS 623
ALH++I +++M E K++ QL+ E G +S
Sbjct: 1608 GGTTADPSALHSEIHSLKMQREQKQIELSQARATGTPALVTQLEAEIRNLSAKRLGVMSK 1667
Query: 624 ADEKRYRML---------KKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFHSILIDES 672
DE + + ++ A +L +ADVIC T GAG L + F +++IDE+
Sbjct: 1668 LDEAKDKQQSQHRQREADRRRARLEILGDADVICTTLSGAGHEMLSGVSFDFETVVIDEA 1727
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR- 731
QA E ++P+ G KQ I+VGD QL P V+ ++A + G SQSLF R+ +
Sbjct: 1728 AQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQEAEKLGYSQSLFVRMFERSPQAVHL 1787
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--KPMLFYVTQGQE 789
L +QYRMHPE+S FPS FY+ LQ+G + +L++ PW + +P F + E
Sbjct: 1788 LSIQYRMHPEISVFPSKAFYDSKLQDG--PNMAQLTRQ--PWHKFELTRPFKFLSIKAPE 1843
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE----QIGVITPYEGQRAFLVQHMQYQG 845
G S +NR EA NV +R E +IGV+T Y+ Q L + Q +
Sbjct: 1844 S-PGRMHSIINREEA-NVALALYERLRIDNPSENFDYRIGVVTMYKAQVFELKRTFQQRY 1901
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS-NDHQGIGFLNDPRRLNVALTRAKYGI 904
L I + I+ +VD FQG+EKD+II+SCVRS + + IGFL+D RRLNVA+TRAK +
Sbjct: 1902 GL--DIVERIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDQRRLNVAVTRAKSNL 1959
Query: 905 IVIGNPKVLSK-QPLWNNLLNFYKEQ 929
+IGN + L + P+W+ L+ ++Q
Sbjct: 1960 FIIGNAEHLRRGDPIWDRLVTTAEQQ 1985
>gi|363754976|ref|XP_003647703.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
gi|356891739|gb|AET40886.1| hypothetical protein Ecym_7029 [Eremothecium cymbalariae DBVPG#7215]
Length = 2019
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 164/525 (31%), Positives = 253/525 (48%), Gaps = 103/525 (19%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ AV ++ SLIQGPPGTGKT T IV Y L SP
Sbjct: 1310 LNTSQATAVVSTVKNLGFSLIQGPPGTGKTKTILGIVGYFLSTIRVSPSNVIKNPTQVGN 1369
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCA--------- 580
VL+CAPSN AVD+L ++ R GL K+VRV
Sbjct: 1370 ISTEQLLQKQKVLICAPSNAAVDELVLRL-REGLTNFEGKHFKPKLVRVGRSDAVNAAIK 1428
Query: 581 -------------------------------------KSREAID----SPVSFLALHN-- 597
K R+ I+ SP S L+
Sbjct: 1429 DLTLEELVDKRAITQSLEMTHDPALDQNFHNAVDERRKLRDTINKEDGSPTSVLSTDQIS 1488
Query: 598 --QIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG 655
Q++ E++ + +L + ++E E +S + + K+ A+ +L +D+IC T G+
Sbjct: 1489 KIQLKLRELSKTINELGKQRDELRERNSVIYRNRELNKRKAQARILAESDIICSTLSGSA 1548
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L L +KF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1549 HDVLASLGVKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAASTYK 1608
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
+QSLF R+ +P L+VQYRMH +S FPS FY+G L++G D +++ +
Sbjct: 1609 YNQSLFVRMEN-NCKPHLLDVQYRMHSMISSFPSLEFYDGKLKDG--PDMDNINQRQWHE 1665
Query: 774 PVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK----PEQIGVIT 828
P P F+ + G+++ SYVN E ++ + +R K +IG+I+
Sbjct: 1666 TQPFAPYKFFDILTGKQQQNAKTMSYVNYDECQVSIEMVDKLLRLYEKKVDFTGKIGIIS 1725
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIGFL 887
PY Q + + ++ I+ I+ ++D FQG+EK++II+SCVR++D + +GFL
Sbjct: 1726 PYREQMQMMKK--AFRSYFGGTIFTYIDFNTIDGFQGQEKEIIIISCVRADDSKNNVGFL 1783
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
D RR+NVALTRAK + ++G+ K L + LW NL++ K + L
Sbjct: 1784 KDFRRMNVALTRAKTSLWILGHHKSLCRNKLWMNLISDAKTRGCL 1828
>gi|153007203|ref|YP_001381528.1| superfamily I DNA/RNA helicase [Anaeromyxobacter sp. Fw109-5]
gi|152030776|gb|ABS28544.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. Fw109-5]
Length = 651
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 218/432 (50%), Gaps = 48/432 (11%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCA 580
L+L+ GPPGTGKT ++ + V + G VL APSN+AVD L E++ G++ VRV
Sbjct: 221 LALVHGPPGTGKTTVLVEVIRRAVAR-GEKVLATAPSNLAVDNLVERLAAAGVRCVRVGH 279
Query: 581 KSREAIDSPVSFLALHNQIRNMEMNSELKKLLQ-LKEET----------------GELSS 623
+R V L + + + + E ++ + L EE G S+
Sbjct: 280 PAR------VLPAVLSHTLEALTESHEAARIARGLVEEAIALRRSAARRRQKRGPGRFSA 333
Query: 624 ADEKR---------YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
+ E+ R L+ AE +LD A+V+ T G P L + +F + DE+ Q
Sbjct: 334 SREQERDARALFAEARTLEARAEGEVLDRAEVVLSTLTGLDAPPLARRRFTLAVADEATQ 393
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEV 734
A EP + +L A++ +L GDH QL P V+ A GL SLFERLV L ++ +
Sbjct: 394 AVEPALYL-ALLRAERAVLAGDHLQLPPTVLSGAAQAGGLGVSLFERLVALHGDAIKVTL 452
Query: 735 --QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA 792
Q+RM+ + FPS Y G+L+ ER + P V D + +EE
Sbjct: 453 AEQHRMNARIMAFPSEALYGGALRAHPAVAERAIDGA--PLEVVDTAGRGF----EEETP 506
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
S N EA+ V + G+ P ++ VI+PY+ Q VQ ++ L A +
Sbjct: 507 EGSDSKQNAGEAALVAGEVEALLAQGLDPAEVAVISPYDAQ----VQRLRQL--LAAHLD 560
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
+ +EV +VD FQGREKD +++S VR+N+ +GFL D RR+NVALTRA+ ++V+G+
Sbjct: 561 RGLEVDTVDGFQGREKDAVVVSLVRANETGEVGFLADVRRMNVALTRARMKLVVVGDGAT 620
Query: 913 LSKQPLWNNLLN 924
+++ P + L+
Sbjct: 621 VARHPFYARFLS 632
>gi|340519570|gb|EGR49808.1| hypothetical protein TRIREDRAFT_59544 [Trichoderma reesei QM6a]
Length = 2034
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 168/549 (30%), Positives = 257/549 (46%), Gaps = 106/549 (19%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQL-------------------- 543
LNR Q AV A + +LIQGPPGTGKT T +V L
Sbjct: 1331 LNRGQALAVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSEQLAQNSLAGAGVPLGTP 1390
Query: 544 VKQTGSP---------VLVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAI 586
+K G+P +LVCAPSN AVD+L ++ + G+K + V R EAI
Sbjct: 1391 IKPAGAPTGNQARSKKLLVCAPSNAAVDELVLRL-KGGIKTANGKDRNINVLRLGRSEAI 1449
Query: 587 DSPVSFLALHNQIRNM------------------EMNSELK-KLLQLKEETGELSSADE- 626
++ V + L ++ E +++K +L QL+ E + D+
Sbjct: 1450 NAAVKDVTLDEMVKARLEGDTTKDKAKADRDKLHEEAAQVKEQLAQLRPRLEESRNHDDR 1509
Query: 627 -------------KRYRM----------------------LKKNAEKSLLDNADVICCTC 651
KR +M ++ ++ +L++A V+C T
Sbjct: 1510 SLHNSLSRQFDELKRKQMQIGKQIDANKDSGNSIAREMELRRRQIQQEILNSAHVLCATL 1569
Query: 652 VGAGDP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
G+G R L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + A
Sbjct: 1570 SGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSA 1629
Query: 710 ARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
AR G QSLF R+ + L ++QYRMHPE+S FPS FYE L++G D +L +
Sbjct: 1630 ARFGYDQSLFVRMQQNHPKSVHLLDMQYRMHPEISSFPSREFYESQLKDG--QDMLRLRQ 1687
Query: 769 IDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR----CGMKPEQI 824
+ P F+ +G +E G S VN E ++ RF R C + +I
Sbjct: 1688 APWHKDALFAPYRFFDVEGVQERGRKGQSLVNTKELDVALQMYERFSRDYRDCDLT-RKI 1746
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+ITPY+ Q L ++Q I IE + DAFQGRE ++II SCVR++ GI
Sbjct: 1747 GIITPYKAQLHEL--RSRFQARYGENITNIIEFNTTDAFQGRECEIIIFSCVRASSTGGI 1804
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL 944
GF+ D RR+NV LTRAK + ++G+ + L + W L+ + + +G + ++
Sbjct: 1805 GFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIEDAQGRDRYTKGDILSMFRRP 1864
Query: 945 ILFSKPKQY 953
+ +KP Y
Sbjct: 1865 LERAKPDAY 1873
>gi|223478666|ref|YP_002583052.1| DNA helicase [Thermococcus sp. AM4]
gi|214033892|gb|EEB74718.1| DNA helicase [Thermococcus sp. AM4]
Length = 660
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 256/503 (50%), Gaps = 88/503 (17%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A+ A+ P LI GP GTGKT T ++ Q V + G VL A SN+AVD
Sbjct: 175 LNASQRRAIAKALGSPDFFLIHGPFGTGKTRTLVELIRQEVAR-GHRVLATAESNVAVDN 233
Query: 564 LTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLA----LHNQIRNMEMNSEL-------- 608
L E++ +GLKVVRV SR + ++ +++L L+ ++R + + E
Sbjct: 234 LVERLVDSGLKVVRVGHPSRVSKKLHETTLAYLMTQHELYGELRELRVIGENLKEKRDTF 293
Query: 609 -------------KKLLQLKE--------------ETGELSSADEK------RYRMLKKN 635
+++L+L E E + +E+ R L++
Sbjct: 294 TKPAPKYRRGLTDRQILRLAEKGIGTRGVSARLIREMAQWLKINEQVQKTFDDARKLEER 353
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
+ ++ ADV+ T AG + + +IDE+ QAT P ++P I A++ +L G
Sbjct: 354 IAREIIREADVVLTTNSSAGLEVVDYGSYDVAVIDEATQATIPSVLIP-INRARRFVLAG 412
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
DH QL P ++ +KA LS++LFE L+ + L VQYRM+ L +FPS FY+G
Sbjct: 413 DHRQLPPTILSEKAKE--LSKTLFEGLIERYPGKSEMLTVQYRMNERLMEFPSREFYDGR 470
Query: 755 LQNGVCADE--RKLSKIDF---------PWPV---PDKPMLFYVTQGQE---EIAGSGT- 796
++ ADE R ++ D W P+ ++F T G+E E G+
Sbjct: 471 IE----ADESVRGITLADLGVKSPEEGDAWAKVLKPENVLVFIDTAGREDRFERQRYGSE 526
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
S N EA V++ + G+KPE IGVI+PY+ QR + LP +EIE
Sbjct: 527 SRENPLEARLVKEAVEGLLSLGVKPEWIGVISPYDDQRDLI------SSLLP----EEIE 576
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
V +VD +QGREK++I++S VRSN +GFL D RRLNV+LTRAK +I+IG+ LS
Sbjct: 577 VKTVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSSH 636
Query: 917 PLWNNLLNFYKEQKVLVEGPLNN 939
P + L+ F +E++ V PLN+
Sbjct: 637 PTYKRLVEFVRERETYV--PLNS 657
>gi|403223698|dbj|BAM41828.1| tRNA-splicing endonuclease [Theileria orientalis strain Shintoku]
Length = 798
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 243/502 (48%), Gaps = 75/502 (14%)
Query: 506 NRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSP--VLVCAPSNIAVD 562
N Q+ AV +++ +SLIQGPPGTGKT T IV L + S +L+CAPSN A+D
Sbjct: 300 NSGQLSAVSNSLMTEGISLIQGPPGTGKTTTIMGIVIHLGSENHSNRRILICAPSNAAID 359
Query: 563 QLTEKI------------HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKK 610
++ +++ +R V RV H ++ + ++LKK
Sbjct: 360 EIVKRLVSPDGGIFDPQGNRYNPTVTRVGPN-------------FHEDLKEYSLETKLKK 406
Query: 611 LLQLKEETGELSSADEKRYRMLKK-NAEKSLLDNADVICCTCVGAGDPRLLKIK--FHSI 667
L LS R K+ +L N++++C T G G L + F ++
Sbjct: 407 WLS----KNNLSHLKGDRGNTAKRPTIIMDILLNSEIVCSTLSGCGSRELYGLINCFDTL 462
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
+IDE+ QA E ++P LG K+ ILVGD CQL V K A + QSLF+RL + G
Sbjct: 463 IIDEATQAVELSTLIPFNLGCKRAILVGDPCQLSATVCSKVAIQLNYDQSLFKRLQLCGY 522
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW---PVPDKPMLFYV 784
L++QYRM P +++FPS +FY+ L N ++ LSK + W P+ +P +F+
Sbjct: 523 PVNFLKLQYRMDPLITRFPSMYFYQNQLINA----KKSLSKPEEDWRQFPL-FRPTVFFA 577
Query: 785 TQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC-----GMKPEQ----IGVITPYEGQRA 835
E + + TSYVN E V ++ I G+ E+ I VI+PY Q
Sbjct: 578 IDSHE--SRNDTSYVNEMEVDLVCQLLEMLIEIMSTIPGITAEEIARKIAVISPYAAQAE 635
Query: 836 FLVQHMQ-------------YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN--- 879
L + Y P+K Q I V++VD FQG EKD+II S VR+N
Sbjct: 636 ILKSTISQRIKINPQTNVPDYSKITPSKTNQ-IYVSTVDGFQGMEKDIIIFSAVRTNYVD 694
Query: 880 ---DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFY-KEQKVLVEG 935
+ F+ D RR+NVA+TRA ++++GNP+ L W+ L N Y K + +
Sbjct: 695 LTANVIDASFIADRRRINVAITRACSNLLIVGNPRYLLDHKHWSALYNHYAKTGSIFICK 754
Query: 936 PLNNLKESLILFSKPKQYFKKN 957
+NN + L + K+Y KK+
Sbjct: 755 TVNNKLDPNYLKNWSKEYLKKD 776
>gi|226287635|gb|EEH43148.1| DEAD-box type RNA helicase [Paracoccidioides brasiliensis Pb18]
Length = 2162
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 255/538 (47%), Gaps = 117/538 (21%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVK------------------ 545
+N +Q AV+ A+ +LIQGPPG+GKT T +V L+
Sbjct: 1298 VNPAQAKAVRSALDNDAFTLIQGPPGSGKTKTIIALVGALLSPILREQSISCSSSSSSTR 1357
Query: 546 ----------QTGSP------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRV-- 578
+P +LVCAPSN AVD+L + H+ + VVR+
Sbjct: 1358 PALSSSTQSAAKNAPTFKSKKLLVCAPSNAAVDELVMRFKQGVISTDGHKREISVVRLGR 1417
Query: 579 ---------------------CAKSR-------------EAIDSPVSFLALHNQIRNMEM 604
+R E D+ F + +I
Sbjct: 1418 SDAINSNVIDVTLDELVNEKLSGTARKSGNEKDLQTFYLEHKDACTQFNGVRERIDQCRA 1477
Query: 605 NSEL------KKLLQLKEETGELSSA-DEKR---------YRMLKKNAEKSLLDNADVIC 648
SE ++ LK + +LS A D+ R +L++ ++++L++A V+C
Sbjct: 1478 KSERVPEELEREFDLLKRKKAQLSQAIDDARDSNLVAARNADLLRRKIQQNILEDAHVLC 1537
Query: 649 CTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
T G+G L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+
Sbjct: 1538 ATLSGSGHEMFQSLDIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLS 1597
Query: 707 KKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
K A+R QSLF R+ + L+ QYRMHPE+S+FPS FY+G LQ+G D+ +
Sbjct: 1598 KVASRFQYEQSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPDMDKLR 1657
Query: 766 LSKIDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGM 819
S+I W + P F+ QG A G S VN R E++TT F
Sbjct: 1658 -SRI---WHKSELLGPYRFFDVQGLHSSAPKGHSLVNLAEVRVAMKLYERLTTDFKIYDF 1713
Query: 820 KPEQIGVITPYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
+IG+ITPY+GQ ++ M Q+ + I+ IE + DAFQGRE ++II SCVR
Sbjct: 1714 T-NKIGIITPYKGQ----LREMKNQFANKYGSSIFTMIEFNTTDAFQGRECEIIIFSCVR 1768
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
++D +GIGFL D RR+NV LTRAK + V+G+ K L + W L+N +K++ +G
Sbjct: 1769 ASD-RGIGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQGEFWRGLINDAHTRKLVTQG 1825
>gi|424842458|ref|ZP_18267083.1| DNA/RNA helicase, superfamily I [Saprospira grandis DSM 2844]
gi|395320656|gb|EJF53577.1| DNA/RNA helicase, superfamily I [Saprospira grandis DSM 2844]
Length = 637
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 157/460 (34%), Positives = 240/460 (52%), Gaps = 41/460 (8%)
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC 554
H +L LN SQ AV+ + ++++ GPPGTGKT T + +LVK+ SP+LVC
Sbjct: 175 HRRPGDLGQLNTSQAEAVQQILAAEDVAVVHGPPGTGKTTTLVAAIKELVKRE-SPILVC 233
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN----------MEM 604
APSN A D LTE++ GL VVRV SR +D V ++ +++ +
Sbjct: 234 APSNPASDLLTERLAEQGLNVVRVGNVSR--LDEKVLQHSIEGILQDRAEMKEVKKMKKE 291
Query: 605 NSEL-KKLLQLKEETGELSSADEKR------------YRMLKKNAEKSLLDNADVICCTC 651
+EL +K + K + G + +E+R RM++ + +L AD ICCT
Sbjct: 292 AAELFRKAGKFKRKFGP-NERNERRETYQEAKNLIRHARMMEDYLIEKILSEADAICCTL 350
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
V + + + +FH+++IDE+ QA EP C + I A ++IL GD QL P V +KAA+
Sbjct: 351 VSSMNRYIENRRFHTVVIDEAAQALEPACWI-AIAKADKVILAGDPFQLPPTVKSRKAAQ 409
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
GLS +L E+ V R L QYRMH ++ +F + +FYEG LQ AD K +
Sbjct: 410 KGLSITLLEKAVERLERVQLLRTQYRMHEQIMQFSNQYFYEGQLQ---AADFVKNWTLAM 466
Query: 772 PWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ--IGV 826
P+ F T G E+I S N E + + + K + I V
Sbjct: 467 RPGGDTTPVEFIDTAGCSFDEKINPETLSSYNPEEYYILRQHLDHLLSFADKQVRPSIAV 526
Query: 827 ITPYEGQRAFLVQHMQYQ-GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
I+PY Q F+ + M+ P +I + ++DAFQG+E+D++ +S VRSN+ IG
Sbjct: 527 ISPYREQVRFMQEQMETDFDHFPDD---DITIDTIDAFQGQERDVVYISLVRSNEKGEIG 583
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
FL D RRLNVA+TRA+ +I+IG+ L + + + +++
Sbjct: 584 FLKDTRRLNVAMTRARKKLIIIGDSATLGQHKFYQSFMDY 623
>gi|303236249|ref|ZP_07322845.1| putative DNA helicase [Prevotella disiens FB035-09AN]
gi|302483563|gb|EFL46562.1| putative DNA helicase [Prevotella disiens FB035-09AN]
Length = 641
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 246/468 (52%), Gaps = 59/468 (12%)
Query: 496 HFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQ-LVKQTGSPVLV 553
+F+ LP LN +Q AV + + ++++ GPPGTGKT T + + L+K+ S VLV
Sbjct: 187 NFAPIRLPWLNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMKE--SQVLV 244
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSEL----- 608
CA SN+AVD + EK+ G+ V+R+ +R D + F R E + +
Sbjct: 245 CAQSNMAVDWICEKLVDRGINVLRIGNPTR-VNDKMLGF----TYERRFEAHPDYDQLWA 299
Query: 609 --KKLLQLKEETGELSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRL 659
K + QL+ G + + ++ LK A + L A VI T VG+ +
Sbjct: 300 IRKAIRQLRNGKGRGTDSYHQKMDRLKSRATELEIRINSQLFGEARVIASTLVGSNSRIM 359
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
KF ++ IDE+ QA E C +P I A ++I GDHCQL P V A +AGL ++L
Sbjct: 360 EGQKFSTLFIDEAAQALEAACWIP-IRRASRVIFAGDHCQLPPTVKSIAALKAGLGKTLM 418
Query: 720 ERLV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
ER+V V+ + L+VQYRM+ ++ +F S++FY G +++ R + +D+
Sbjct: 419 ERIVENKPEVVTL----LKVQYRMNEQIMRFSSDWFYHGEVESAPQIKYRGI--LDY--- 469
Query: 775 VPDKPMLFYVTQG----------QEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMK--- 820
D PML+ T E+ G +N+ EA ++ + F + G +
Sbjct: 470 --DHPMLWLDTSEIEVGNDEPTFHEQFVGESYGRINKGEAELTLKTLQDYFTKIGKQRIL 527
Query: 821 PEQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMSCVR 877
E+I GVI+PY Q +L + ++ + K Y+ I V +VD FQG+E+D+I++S VR
Sbjct: 528 DERIDVGVISPYRAQVQYLRRLIKKREFF--KPYRALISVNTVDGFQGQERDVILISMVR 585
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
+N++ IGFL D RR+NVA+TRA+ +I++GN +S+ P + L +
Sbjct: 586 ANENGEIGFLKDLRRMNVAITRARMKLIILGNAATMSQHPFYKRLFEY 633
>gi|148643141|ref|YP_001273654.1| DNA2/NAM7 helicase family transcriptional regulator
[Methanobrevibacter smithii ATCC 35061]
gi|148552158|gb|ABQ87286.1| transcriptional regulator (enhancer-binding protein), DNA2/NAM7
helicase family [Methanobrevibacter smithii ATCC 35061]
Length = 658
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 250/500 (50%), Gaps = 89/500 (17%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV++A+ LI GP GTGKT T ++ Q V+Q + VLV A SN AVD
Sbjct: 172 LNESQKNAVRNAVNTENFFLIHGPFGTGKTRTLVELIQQEVRQ-NNKVLVTAESNSAVDN 230
Query: 564 LTEKIHRTG-LKVVRVCAK---SREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE--- 616
+ +++ + LK+ R+ S+E I +++ A ++Q+ ++N K++ Q+ E
Sbjct: 231 ILDRLSQNKKLKITRLGHPQRVSKENITYSLAYKAENHQLTG-KINKNYKRIEQISETRD 289
Query: 617 --------------------------------------------ETGELSSADEKRYRML 632
E ++S +K + L
Sbjct: 290 RFTKPTPQYRRGFSDSDILYNASKGKGGRGINSSKMESMANWLLENEKISEIHDK-IKKL 348
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLI 692
+ K +++++D+I T A + + KF+ +++DE+ QAT P ++P + A++ I
Sbjct: 349 ENKIVKDIINSSDIILSTNSTAAIEEIARTKFNVVIVDEASQATIPSILIP-LSKARRFI 407
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFY 751
L GDH QL P ++ KKA L ++LFE L+ + L VQYRM+ L KFP++ FY
Sbjct: 408 LAGDHKQLPPTIISKKAH--FLEKTLFEELIKKYPNKASLLNVQYRMNSFLMKFPNSEFY 465
Query: 752 EGSLQNGVCADERKLSKI------------DFPWPVPD--KPMLFYVT----QGQEEIAG 793
G+L++ D+ L +I D + + KP+LF T +E+
Sbjct: 466 NGNLKSDSSVDDINLDEIIDSEELSRLKESDVEKQLHNNLKPLLFIDTSNLKNNEEKHLK 525
Query: 794 SGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
S +N++EA+ I ++ G+ P+ IG+I+PY Q + Q +P
Sbjct: 526 DSKSIINQSEAAIATSIAKFYLGTGINPKDIGIISPYADQVNLI------QDKIP----- 574
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
IEV SVD FQGREK++II+S VRSN + IGFL D RRLNVA+TRAK +IVIGN L
Sbjct: 575 -IEVKSVDGFQGREKEIIIISTVRSNKNGNIGFLKDLRRLNVAITRAKRKLIVIGNKNTL 633
Query: 914 SKQPLWNNLLNFYKEQKVLV 933
++ L+ F + +L+
Sbjct: 634 KGNSTYSKLIKFCAKNDLLI 653
>gi|83772589|dbj|BAE62717.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1850
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 246/528 (46%), Gaps = 104/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVK----------------- 545
++N +Q A+K A+ +LIQGPPG+GKT T +V L+
Sbjct: 1165 NVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTGVG 1224
Query: 546 --------QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV--------------------- 576
T +LVCAPSN AVD+L + + G+K +
Sbjct: 1225 NIKPPPRTTTSKKLLVCAPSNAAVDELVMRF-KAGVKTIQGRHEKLSVIRLGRSDAINTN 1283
Query: 577 ------------RVCAKSR-EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
R+ SR ++ + + + + ++ + KL Q + + + +
Sbjct: 1284 VLDVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSKLDQCRAQGLPVPA 1343
Query: 624 ADEKRYRML--KKNAEKSLLDNA--------------------------DVICCTCVGAG 655
E+ + +L KK A +DNA VIC T G+G
Sbjct: 1344 ELEREFELLKKKKTALSQEIDNARDKNHSAARDADLNRRKIQQEIIDGAHVICATLSGSG 1403
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A++
Sbjct: 1404 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1463
Query: 714 LSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ R L++QYRMHPE+S +P N FY+G LQ+G D +L P
Sbjct: 1464 YEQSLFVRMQSNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDG--PDMARLRA--RP 1519
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVI 827
W + P F+ QG + A G S VN E ++ R + + +IG+I
Sbjct: 1520 WHQSELLSPYRFFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDFQGFDFSGKIGII 1579
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L H + I+ I+ + DAFQGRE ++II SCVR+++ +GIGFL
Sbjct: 1580 TPYKGQLRELKTH--FAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVRASN-KGIGFL 1636
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+D RR+NV LTRAK + V+GN + L + WN+L+ + + V +G
Sbjct: 1637 SDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDG 1684
>gi|336397671|ref|ZP_08578471.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
gi|336067407|gb|EGN56041.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
Length = 642
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 246/478 (51%), Gaps = 76/478 (15%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F+ + P LN +Q AV ++ + ++++ GPPGTGKT T + + + + S VLVCA
Sbjct: 185 FAPMSFPWLNETQERAVNEVLRAKDVAVVHGPPGTGKTTTLVEAINETLMRE-SQVLVCA 243
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVSFLALHNQIRN 601
SN+AVD + EK+ G+ V+R+ +R EA A+ IR
Sbjct: 244 QSNMAVDWICEKLVDRGINVLRIGNPTRVNDKMLGFTYERRFEAHPDYSQLWAIRKAIRE 303
Query: 602 MEMNSELK------KLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG 655
+ + + KL +LK EL ++ NAE L A VI T VG+
Sbjct: 304 LRRRKKGRDDNFHQKLERLKSRATELE---------IRINAE--LFGEARVIASTLVGSA 352
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
+ L KF ++ IDE+ QA E C +P I ++IL GDHCQL P V A + GL
Sbjct: 353 NRLLEGQKFGTLFIDEAAQALEAACWIP-IRRVSRVILAGDHCQLPPTVKSIAALKGGLG 411
Query: 716 QSLFERLV--------VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
++L ER+V +LG VQYRM+ E+ +F S++FY G ++ +RK S
Sbjct: 412 KTLMERIVENKPECVTLLG-------VQYRMNEEIMRFSSDWFYGGRVRTAPEILQRK-S 463
Query: 768 KIDFPWPV-----------PDKPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITT 812
++ P+ PD+P +E+ G VN+ EA S+++ T
Sbjct: 464 ILNLDRPILWLDTGQIEMGPDEP------SNKEQFIGESFGRVNKGEAELTLSSLQAYFT 517
Query: 813 RFIRCGMKPEQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKD 869
+ + + E+I GVI+PY Q +L ++ + K Y+ I V +VD FQG+E+D
Sbjct: 518 KIGKERILDERIDVGVISPYRAQVQYLRSLVRKREFF--KPYRRLITVNTVDGFQGQERD 575
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+I++S VR+N++ IGFL+D RR+NVA+TRA+ +I++G+ + L++ P + L + +
Sbjct: 576 IILISMVRANENGEIGFLHDLRRMNVAITRARMKLIILGDVQTLARHPFYKKLWEYVR 633
>gi|328873818|gb|EGG22184.1| putative splicing endonuclease [Dictyostelium fasciculatum]
Length = 1947
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 253/533 (47%), Gaps = 110/533 (20%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRP--LSLIQGPPGTGKTVTSATIVYQLVKQT 547
R +PK + LN SQ+ A+ HA P +L+QGPPGTGKT T ++ L+ T
Sbjct: 1358 RVTIPKKLESALKESLNDSQIEAI-HASLTPSGFTLLQGPPGTGKTKTIIALLSVLL-HT 1415
Query: 548 GSPV--------------LVCAPSNIAVDQLTEKI------HRTGLKVVRVCAK--SREA 585
+P+ LV APSN AVD++ +I ++ GL C + +++
Sbjct: 1416 MTPIKDDSKLKNQAPIKILVTAPSNAAVDEIATRILDQRMLNQDGLPYQPFCIRIGNKQQ 1475
Query: 586 IDSPVSFLAL---------------------------------------HNQIRNMEMNS 606
I+S VS ++L HN+I ++++
Sbjct: 1476 INSTVSKISLDNLLSEELQKDDNKVSQIQQRVASLHEESEKTRSELDEVHNRIN--QLST 1533
Query: 607 ELKKLLQLKEETGELSSADEKRYR---MLK----------------KNAEKSLLDN---- 643
ELK L K+ T ++S K + MLK +N ++S+L N
Sbjct: 1534 ELKVLRDAKQPTDHITSELTKLHNKKSMLKSSKNNFVDLRRGYDNLENEKRSMLSNMLNR 1593
Query: 644 ADVICCTCVGAGDPRLLKI--KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLG 701
A +I T G+G L +F ++IDE+ QA E ++P+ K+ ILVGD QL
Sbjct: 1594 ASIILSTLSGSGYESLSAAVKQFDVVIIDEAAQAVELSTLIPLKHNVKKCILVGDPNQLP 1653
Query: 702 PVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG--V 759
V+ + QSLF+RL GI L VQYRMHP +S+FPS FY G +++G V
Sbjct: 1654 ATVISRITTNFQYEQSLFQRLSQCGIPMQVLNVQYRMHPTISRFPSKHFYHGQIKDGHNV 1713
Query: 760 CADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
A + K P +FY +T E+ S S N EA I ++ +
Sbjct: 1714 IALNHNIYK-----DARFGPFIFYDITDSVEDSNQSSHSLRNVHEAKLANLIISQLLVHF 1768
Query: 819 MKPEQ---IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
K + IGVITPY+ Q+ L + + + S+ +EV +VD FQGREKD+II SC
Sbjct: 1769 SKDCEKLSIGVITPYKQQQIELSRRLSHFNSM-------VEVNTVDGFQGREKDIIIFSC 1821
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
VR++ IGFL+D RR+NV LTRAK +IVIG+ +L W L+ F K+
Sbjct: 1822 VRAHKGGSIGFLSDVRRMNVGLTRAKLSMIVIGHTNLLMLNSDWGELIKFSKQ 1874
>gi|111219429|ref|XP_646844.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
gi|90970905|gb|EAL73051.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
Length = 1772
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 237/451 (52%), Gaps = 72/451 (15%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTG 548
R +P + + +LN SQ +++ ++ + ++LIQGPPGTGKT T ++ L+
Sbjct: 1228 RMAIPSLLRSMCIQELNTSQFNSIETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINP 1287
Query: 549 S-PVLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHN 597
+LVC PS+ +VD++ ++ + L +VR+ K E I +++ N
Sbjct: 1288 EFKILVCGPSHASVDEIAKRCSKKKLIGLDGKPYLPNMVRIGKK--ENISPDCHSISIFN 1345
Query: 598 QIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
+ + +E++ + YR A ++ T G+G
Sbjct: 1346 KTQ--------------REKSDSI-------YR-------------ASIVFSTLSGSGS- 1370
Query: 658 RLLKIKFHS--ILIDESMQATEPECMVPVILG-AKQLILVGDHCQLGPVVMCKKAARAGL 714
+K F + IL+DES Q+TEP ++P+ +G ++LILVGD QL P + ++A GL
Sbjct: 1371 ETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLILVGDPLQLPPTIFSTESAENGL 1430
Query: 715 SQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
+ SLFERL VL + L VQYRMHP +S+FPSN FY L +G ++ +F
Sbjct: 1431 NISLFERLSKVLPVE--MLHVQYRMHPTISRFPSNQFYRDRLLDGDNVKSLVYNQHNFHS 1488
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGMKPEQIGVITP 829
+ P+ FY +E +G S N+ E + V +K+ + C K G+ITP
Sbjct: 1489 DIKYGPIRFYDVIDSKEESGK-RSLKNKLEITMVFTLIKKLVQDYPEC--KKFSFGIITP 1545
Query: 830 YEGQRAFLV-QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Y+ Q++ + QH Q+ L IE +++D FQG EKD+II+SCVRS + IGFL+
Sbjct: 1546 YKLQKSEIKEQHKQFNYPL------NIETSTIDGFQGSEKDIIILSCVRS---ERIGFLS 1596
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
D RR+NVALTRAK+G+ VIGN K+L K W
Sbjct: 1597 DRRRINVALTRAKFGLFVIGNSKLLKKDRTW 1627
>gi|281203712|gb|EFA77908.1| AN1-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 988
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 266/525 (50%), Gaps = 69/525 (13%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH------ 496
F++D + ++ +M+ A+ + + ++ ++LF P H
Sbjct: 152 FAIDKLANDITYRKMRDAIERLKTTNSPIT-------------DILFSNQEPTHTIKKVK 198
Query: 497 FSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
SA + LN+ Q+ A++ A+ ++LI GPPGTGKT T + Q+ K G VL C
Sbjct: 199 ISAVS-KKLNQPQIEAIEFALSSNEIALIHGPPGTGKTTTVVEFIVQVCK-GGGRVLACG 256
Query: 556 PSNIAVDQLTEKI--HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN-------MEMNS 606
PSN++VD + E++ + + R+ +R I S ++ L ++ +N E+
Sbjct: 257 PSNLSVDNILERLLEFKDIVNPTRIGHPAR--ILSGLTKHTLDHKTKNGQDAQILKEIKI 314
Query: 607 ELKKLL-QLKEETGELSSADEKRYRMLK------KNAEKSLLD----NADVICCTCVGAG 655
E+ L+ QLK+ E A Y ++ KN E SL+D N++VI T GA
Sbjct: 315 EIATLMKQLKDGQVE-KGARRSVYNTIRDLRKDLKNREFSLVDQVIRNSNVILSTNTGAA 373
Query: 656 DPRLLKIK-FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
D L + + F ++IDE+ QA E C +P+ G K+L+L GDH QL P + ++A GL
Sbjct: 374 DYVLSRCEPFDWVIIDEAAQALEASCWIPISRG-KKLLLAGDHQQLPPTIHSEQAKSDGL 432
Query: 715 SQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEG------SLQNGVCADERKL 766
++FERL+ L L VQYRM+ E+ ++ S+ FY G S+ N + +
Sbjct: 433 ETTMFERLIQLYQENISRLLSVQYRMNQEIMRWSSDEFYHGRMLADNSVANHLLLERSTK 492
Query: 767 SKIDFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ 823
+++ P ++ T G +E S N EA V K + +R G++
Sbjct: 493 NRVATTTTCP---LMLIDTSGLDMEESADDESQSKFNVGEADIVVKYIEKLLRYGVEQSS 549
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH-Q 882
IGVITPY GQ V+ ++ + + + +IE+ +VD FQGREK+++I+S VRSN
Sbjct: 550 IGVITPYNGQ----VKQLKM---VLSNRFSDIEIGTVDGFQGREKEVVIISTVRSNAAPH 602
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+GFL + RR+NVA+TRAK + ++ + LS P ++ ++K
Sbjct: 603 NVGFLAEERRMNVAITRAKRQVTLVSDTDTLSSNPFLARMVEYFK 647
>gi|354546507|emb|CCE43239.1| hypothetical protein CPAR2_208840 [Candida parapsilosis]
Length = 672
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 172/519 (33%), Positives = 265/519 (51%), Gaps = 65/519 (12%)
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH 496
T ++ F + + S ++ RM + K +S I+ LLG +L
Sbjct: 141 TNDSSRFWIVKLANSITYKRMITTMNKVLELKESEKNDIHKLLLGETKHNLLSGNSTINF 200
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
F++ LN+SQ A+ AI + +S+I GPPGTGKT+T ++ QL + G VLVC
Sbjct: 201 FNSG----LNQSQKSAIDFAINKSNISIIFGPPGTGKTMTLVELIRQLTLR-GEKVLVCG 255
Query: 556 PSNIAVDQLTEKI--HRTGLKVVR-----------------VCAKS--REAI-DSPVSFL 593
PSNI+VD + E++ H +++R V +KS RE I D
Sbjct: 256 PSNISVDTILERLGSHYKAGELIRIGHPARLLPVNLQHSLEVLSKSFGREVIKDLENDIQ 315
Query: 594 ALHNQIRNMEMNSELKKLLQ-LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCV 652
++ N+I+ + +E K L Q LK+ EL + K LL+ A V+ T
Sbjct: 316 SVLNKIKKCKRYTERKALYQELKQLKKELVQRERKIVH--------ELLNGAQVVLATLH 367
Query: 653 GAG--DPRLLKIKFHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKK 708
GAG D + + F +I+IDE Q+ EP+C +P++ K +L++ GD+ QL P ++
Sbjct: 368 GAGSFDLKRSGVSFDTIIIDEVSQSLEPQCWIPLLHNDKFKRLVIAGDNMQLPPTIISGN 427
Query: 709 AARAGLSQSLFERLV--VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
A+ L +LF+RLV V G + +L VQYRM+ + KFPS YE L + K
Sbjct: 428 ASL--LETTLFDRLVKEVEGNKYKKLLNVQYRMNDSIMKFPSMQLYEDKLISDASVKNIK 485
Query: 766 LSKIDFPWPVPDKPM----LFYVTQG-----QEEIAGSGTSYVNRTEASNVEKITTRFIR 816
L+ D P + ++Y TQG Q+ + G S N E V+ R +
Sbjct: 486 LT--DLPDVESNDETSIQCVWYDTQGGDFPEQKLESIKGDSKYNEMELQIVKSHIRRLVD 543
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCV 876
G+ P+ IGVI PY Q L + + P + IEV++VD FQGREK++II++ V
Sbjct: 544 SGVLPQDIGVIAPYAAQVQLLKKQLG-----PESL---IEVSTVDGFQGREKEVIILTLV 595
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
RSND + +GFL++ RRLNVA+TR K + VIG+ +++++
Sbjct: 596 RSNDERDVGFLSEERRLNVAITRPKRQLCVIGDLQLMNE 634
>gi|440800551|gb|ELR21587.1| DNAbinding protein SMUBP-2, putative [Acanthamoeba castellanii str.
Neff]
Length = 799
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 193/342 (56%), Gaps = 17/342 (4%)
Query: 603 EMNSELKKLLQLKEETG-ELSSADEKRYRM------LKKNAEKSLLDNADVICCTCVGAG 655
E+ EL +L K + G E+S E R + L+K E +L+ D++ T G+G
Sbjct: 455 ELRRELTELHNGKAKLGKEISRFHETRKKYGSRVSKLRKQMELQILNETDIVLTTLSGSG 514
Query: 656 DPRLLKIK--FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L + F +++IDE+ QA E ++P+ ++ ILVGD QL V+ + A+
Sbjct: 515 SDILSHMSHGFETVVIDEAAQAVEMATLIPLKYDCRRCILVGDPNQLPATVISQAASSFL 574
Query: 714 LSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
+QSLF+RL G L+VQYRMHP + +FPS FY+ L +G D + + P+
Sbjct: 575 YAQSLFQRLQKAGHPVIMLDVQYRMHPLIREFPSKHFYDNRLTDGPNIDTSQSGLYNQPY 634
Query: 774 PVPD--KPMLFY-VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-QIGVITP 829
+P LFY + +G EE G SYVN EA+ ++ C P + GVITP
Sbjct: 635 HADPSFQPFLFYDLCKGVEEQGARGQSYVNPAEATFCLQLFQDL--CSRFPHIESGVITP 692
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y+ Q+ FL+Q + +L Y I++ ++D FQGREKD+II SCVR+++ +GIGFL+D
Sbjct: 693 YK-QQYFLLQRT-FAAALDKATYSAIDINTIDGFQGREKDVIIFSCVRAHETKGIGFLSD 750
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
RR+NVALTRAK+G+ V+G L P W L+N KE+++
Sbjct: 751 IRRMNVALTRAKFGLFVVGKSTALLNNPHWGALVNHAKEKQL 792
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 23/97 (23%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVT------SATIVYQL 543
R P AP L L S + L+QGPPGTGKT T S+ I+ +L
Sbjct: 272 RVQGPHVRRAPTLASLCESDSFV----------LLQGPPGTGKTKTILGILSSSLIMSRL 321
Query: 544 VKQTGS-------PVLVCAPSNIAVDQLTEKIHRTGL 573
+ T + PVLVCAPSN AVD++ ++ GL
Sbjct: 322 SQATQTDPNNKRNPVLVCAPSNAAVDEICMRLLEDGL 358
>gi|367007328|ref|XP_003688394.1| hypothetical protein TPHA_0N01790 [Tetrapisispora phaffii CBS 4417]
gi|357526702|emb|CCE65960.1| hypothetical protein TPHA_0N01790 [Tetrapisispora phaffii CBS 4417]
Length = 677
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/507 (31%), Positives = 260/507 (51%), Gaps = 58/507 (11%)
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+ ++ RM+ LRK + + + I LL + F PK N LN+SQ
Sbjct: 159 TVTYKRMESTLRKLGEFEGTPNNNIIQYLL----QDRQFIKQTPKSDIEFNNKALNKSQK 214
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A+ A+ +S+I GPPGTGKT T ++ QLV + G VLVC PSNIAVD + E++ +
Sbjct: 215 DAIAFAMANDISIIHGPPGTGKTYTLIELIQQLVAK-GERVLVCGPSNIAVDTILERLDK 273
Query: 571 T--GLKVVRVCAKSR--EA-IDSPVSFLALHNQ----IRNMEMN-----SELKKLLQLKE 616
G ++R+ +R EA + + L+ +++++ + S++KK+ K+
Sbjct: 274 VLPGNVLLRIGHPARLLEANLAHSLDILSRSGNAGEIVKDIDKDIDKTISDIKKMKNYKD 333
Query: 617 --ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------FHSIL 668
E +L + R +K ++ A V+ T GAG L + F++++
Sbjct: 334 RKEARKLVKDLRRELRTREKKVICDMILEARVVVATLHGAGSRELCSVYDQVPKLFNTLI 393
Query: 669 IDESMQATEPECMVPVILGAK----QLILVGDHCQLGPVVMCKKAARAG--LSQSLFERL 722
IDE Q+ E +C +P+I + +L+L GD+ QL P + + + LS +LF+RL
Sbjct: 394 IDEVSQSLEQQCWIPLISHYRSDISRLVLAGDNKQLPPTIKTEDNKKIADQLSTTLFDRL 453
Query: 723 VVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--- 777
V + F+ L VQYRM+ + +FPS Y G L AD ++I P D
Sbjct: 454 VKVYGDQFKTLLNVQYRMNESIMEFPSTEMYNGQL----IADSSVKTQILSDLPGVDAND 509
Query: 778 ---KPMLFYVTQGQEEIAGSG------TSYVNRTEASNVEKITTRFIRCGMKPEQIGVIT 828
+P+++Y TQG + + + S N EA V+ + + + IGVI+
Sbjct: 510 ETLEPLIWYDTQGDDFLERADDDNEIIASKYNENEAYLVKSHILKLLESNVPQSAIGVIS 569
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY Q +F+ + ++ + Y IE+++VD FQGREK++II+S VRSND +GFL
Sbjct: 570 PYRAQISFIKKLIRAE-------YPGIEISTVDGFQGREKEVIILSLVRSNDDYKVGFLK 622
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSK 915
D RRLNVA+TR+K + VIGN + L +
Sbjct: 623 DSRRLNVAITRSKKQLCVIGNMETLER 649
>gi|322709665|gb|EFZ01241.1| putative SEN1 protein [Metarhizium anisopliae ARSEF 23]
Length = 2049
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 169/549 (30%), Positives = 253/549 (46%), Gaps = 108/549 (19%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQ----------TGSPV-- 551
LN Q AV A +LIQGPPGTGKT T +V L+ + G+P+
Sbjct: 1321 LNHGQAVAVLGAQDNDGFTLIQGPPGTGKTKTITAMVGSLLSEQLAQASNGVPMGAPLRP 1380
Query: 552 ---------------LVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDS 588
LVCAPSN AVD+L ++ ++G+K + V R +AI++
Sbjct: 1381 LAGAIPAGQGRPKKLLVCAPSNAAVDELVLRL-KSGVKTSSGKTKPINVLRLGRSDAINA 1439
Query: 589 PVSFLALHNQIRN-ME-------MNSELKKL----LQLKEETGELSSA-DEKRYR----- 630
V + L +RN ME +E KL +++EE E+ DE R +
Sbjct: 1440 AVKDVTLDELVRNRMEGDNTKDKAKAERDKLHGDAAKIREELAEIRQLLDEARAQDNRIT 1499
Query: 631 -------------------------------------MLKKNAEKSLLDNADVICCTCVG 653
M ++ ++ +L++A V+C T G
Sbjct: 1500 QNTLSRKFDELKRQQMNIGKQIDANKDSGNSLAREMEMRRRQVQQEILNSAHVLCATLSG 1559
Query: 654 AGDP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
+G R L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR
Sbjct: 1560 SGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSAAR 1619
Query: 712 AGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
G QSLF R+ + L ++QYRMHPE+S FPS FYEG LQ+G + L
Sbjct: 1620 FGYDQSLFVRMQQNHPKSVHLLDMQYRMHPEISMFPSKEFYEGQLQDG----QDMLQLRH 1675
Query: 771 FPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR----CGMKPEQI 824
PW P F+ +G +E G S VN E ++ RF + C + +I
Sbjct: 1676 QPWHQSALLGPYRFFDVEGVQEKGRKGQSLVNTRELQVAMEMYDRFSKEYKQCDLTG-KI 1734
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+ITPY+ Q ++ I IE + DAFQGRE ++II SCVR++ GI
Sbjct: 1735 GIITPYKAQ--LFELRNRFTSRYGENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGGI 1792
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL 944
GF+ D RR+NV LTRAK + ++G+ + L + W L+ K + +G + +
Sbjct: 1793 GFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWKKLIEDAKARDRYTKGDILGMFRQP 1852
Query: 945 ILFSKPKQY 953
+ + P Y
Sbjct: 1853 LRRASPSTY 1861
>gi|225558060|gb|EEH06345.1| DEAD-box type RNA helicase [Ajellomyces capsulatus G186AR]
Length = 2150
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 253/534 (47%), Gaps = 110/534 (20%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------------------- 544
+N +Q AV+ A+ +LIQGPPG+GKT T +V ++
Sbjct: 1293 VNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPGSSGDFR 1352
Query: 545 ----KQTGSPVLVCAPSNIAVDQL---------TEKIHRTGLKVVRVCAKSREAIDSPVS 591
T +LVCAPSN AVD+L T + + VVR+ +AI+S V
Sbjct: 1353 PATRATTSGKLLVCAPSNAAVDELVMRFKEGVITSSGQKHNISVVRLGRS--DAINSNVM 1410
Query: 592 FLAL----------------------------------HNQIR---------NMEMNSEL 608
+ L N+IR + SEL
Sbjct: 1411 DVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIRERLDQCRAKGQHVPSEL 1470
Query: 609 KKLLQL-KEETGELSSA-DEKR---------YRMLKKNAEKSLLDNADVICCTCVGAGDP 657
++ L K + +LS A D R + +K ++ +++ + VIC T G+G
Sbjct: 1471 EREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGHE 1530
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A+R
Sbjct: 1531 MFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQYE 1590
Query: 716 QSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
QSLF R+ + L+ QYRMHPE+S+FPS FY+G L++G D KL PW
Sbjct: 1591 QSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDG--PDMAKLRV--RPWH 1646
Query: 775 VPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIGVIT 828
+ P F+ QG A G S VN R E++T ++ K +IG+IT
Sbjct: 1647 SSELLGPYRFFDVQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFK-GKIGIIT 1705
Query: 829 PYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
PY+GQ ++ M Q+ I+ +E + DAFQGRE ++II SCVR+++ +GIGF
Sbjct: 1706 PYKGQ----LREMKNQFANKYGNSIFTTVEFNTTDAFQGRECEVIIFSCVRASN-RGIGF 1760
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNL 940
L D RR+NV LTRAK + V+GN + L + WN L+ + + + +G + L
Sbjct: 1761 LADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQGDILKL 1814
>gi|296413292|ref|XP_002836348.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630165|emb|CAZ80539.1| unnamed protein product [Tuber melanosporum]
Length = 1971
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 162/518 (31%), Positives = 250/518 (48%), Gaps = 94/518 (18%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV------------------- 544
+N Q A+ A++ +LIQGPPGTGKT T IV L+
Sbjct: 1236 VNEPQARAILSAVKNTGFTLIQGPPGTGKTKTVVGIVGALLTPKVGSTVIQIPGSMNKSP 1295
Query: 545 KQTGSPVLVCAPSNIAVDQLTEKIHRTGL---------KVVRV----------------- 578
K T +LVCAPSN AVD+L + + L KVVR+
Sbjct: 1296 KPTTKKLLVCAPSNAAVDELVLRFKKGILTAKGEEMQPKVVRIGKSDAVNFTVRDVTLDE 1355
Query: 579 -----CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE------ETGELSSA--- 624
A ++E+ +S + + Q ++ KL QL++ + G L S
Sbjct: 1356 LVERKMAPTKESANSKNADMDELRQKHRAILDERDAKLKQLEDARAKSIDPGTLQSEIDS 1415
Query: 625 ----------------DEKR-----YRMLKKNAEKSLLDNADVICCTCVGAGDP--RLLK 661
D+K+ +LK+ ++ ++D A +IC T G G R +
Sbjct: 1416 LNATLRETRRSLDLKRDQKKESSRNAEVLKRRIQQEIMDEAHIICATLSGTGHDLLRNIN 1475
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
+ F +++IDE+ Q+ E ++P+ G ++ ILVGD QL P V+ ++AA+ +SLF R
Sbjct: 1476 VDFETVIIDEAAQSVELSALIPLKFGCEKCILVGDPKQLPPTVLSREAAKFSYEKSLFVR 1535
Query: 722 LVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
+ + L +QYRMHP +S FP FY+ L++G E + +++ P+ P
Sbjct: 1536 MQENHPKDVHLLSIQYRMHPMISSFPRKQFYDSELEDGENMKELR-TEVWHKNPI-YAPY 1593
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRAF 836
F+ GQE AG S VNR EA + +++T F + +IG+ITPY+ Q
Sbjct: 1594 RFFNIAGQES-AGGLHSLVNRQEAQSALSLYQRLTADFPQTNFD-GKIGIITPYKQQINL 1651
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
L ++ I I+ + DAFQGRE+D+II SCVR++ GIGFL+D RR+NV
Sbjct: 1652 L--KTTFRDVYGENICDTIDFNTTDAFQGRERDIIIFSCVRASQEGGIGFLSDVRRMNVG 1709
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
LTRAK+ + V+G+ L + LW +L+ K++ V E
Sbjct: 1710 LTRAKFSLFVLGHSTSLMRNRLWASLVQDAKDRGVFDE 1747
>gi|325268516|ref|ZP_08135146.1| helicase [Prevotella multiformis DSM 16608]
gi|324989044|gb|EGC20997.1| helicase [Prevotella multiformis DSM 16608]
Length = 654
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 249/487 (51%), Gaps = 82/487 (16%)
Query: 497 FSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
FS+ LP LN +Q AV + + ++++ GPPGTGKT T + + + + S VLVCA
Sbjct: 185 FSSIRLPWLNPAQERAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRE-SQVLVCA 243
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SN+AVD ++EK+ G+ V+R+ +R D + F R E + + +L ++
Sbjct: 244 QSNMAVDWISEKLIDRGINVLRIGNPTR-VNDKMLGF----TYERKFEAHPDYPQLWSIR 298
Query: 616 EETGEL-------SSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLK 661
+ EL S + ++ LK A + SL A V+ T GAG +
Sbjct: 299 KAIRELRNNRKRGSESYHQKMDRLKSRATELEIRIHTSLFGEARVVASTLAGAGSRVMEG 358
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
KF ++ IDE+ QA E C + I A ++IL GDHCQL P V A R GL ++L ER
Sbjct: 359 QKFTTLFIDEAAQALEAACWI-AIRRASRVILAGDHCQLPPTVKSIAALRGGLGKTLMER 417
Query: 722 LV-----VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN------------------- 757
+V V+ + L+VQYRM+ ++ +F S++FY G ++
Sbjct: 418 IVENKREVVTL----LKVQYRMNEDIMRFSSDWFYGGQVEAAPQIKYRGILDYDNPMVWI 473
Query: 758 -----------GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS- 805
G+ ADE SK FP D+ F+ E+ GS +N+ EA
Sbjct: 474 DTSDEAVTSAYGLAADE---SKTPFPLSGKDQEDAFH-----EQFVGSSFGRINKGEAEL 525
Query: 806 NVEKITTRFIRCGMK---PEQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVAS 859
++ + F + G + E+I G+I+PY Q +L ++ + K Y+ + V +
Sbjct: 526 TLKTLKDYFTKIGRQRVLDERIDVGIISPYRAQVQYLRSLIKKREFF--KPYRSLVSVNT 583
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK---- 915
VD FQG+E+D+I++S VRSN+ IGFL D RR+NVA+TRA+ +I++GN + +++
Sbjct: 584 VDGFQGQERDVILISLVRSNEEGQIGFLRDLRRMNVAITRARMKLIILGNARTMTRHAFY 643
Query: 916 QPLWNNL 922
+ LW++L
Sbjct: 644 KKLWDSL 650
>gi|317150187|ref|XP_001823850.2| tRNA-splicing endonuclease [Aspergillus oryzae RIB40]
Length = 2103
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 246/528 (46%), Gaps = 104/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVK----------------- 545
++N +Q A+K A+ +LIQGPPG+GKT T +V L+
Sbjct: 1288 NVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTGVG 1347
Query: 546 --------QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV--------------------- 576
T +LVCAPSN AVD+L + + G+K +
Sbjct: 1348 NIKPPPRTTTSKKLLVCAPSNAAVDELVMRF-KAGVKTIQGRHEKLSVIRLGRSDAINTN 1406
Query: 577 ------------RVCAKSR-EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
R+ SR ++ + + + + ++ + KL Q + + + +
Sbjct: 1407 VLDVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSKLDQCRAQGLPVPA 1466
Query: 624 ADEKRYRML--KKNAEKSLLDN--------------------------ADVICCTCVGAG 655
E+ + +L KK A +DN A VIC T G+G
Sbjct: 1467 ELEREFELLKKKKTALSQEIDNARDKNHSAARDADLNRRKIQQEIIDGAHVICATLSGSG 1526
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A++
Sbjct: 1527 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1586
Query: 714 LSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ R L++QYRMHPE+S +P N FY+G LQ+G D +L P
Sbjct: 1587 YEQSLFVRMQSNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDG--PDMARLRA--RP 1642
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVI 827
W + P F+ QG + A G S VN E ++ R + + +IG+I
Sbjct: 1643 WHQSELLSPYRFFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDFQGFDFSGKIGII 1702
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L H + I+ I+ + DAFQGRE ++II SCVR+++ +GIGFL
Sbjct: 1703 TPYKGQLRELKTH--FAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVRASN-KGIGFL 1759
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+D RR+NV LTRAK + V+GN + L + WN+L+ + + V +G
Sbjct: 1760 SDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDG 1807
>gi|197124729|ref|YP_002136680.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
gi|196174578|gb|ACG75551.1| superfamily I DNA and RNA helicase [Anaeromyxobacter sp. K]
Length = 622
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 226/467 (48%), Gaps = 59/467 (12%)
Query: 494 PKHFSAPNLP----DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT- 547
P+ AP P LN Q A+ A + L+L+ GPPGTGKT T++ +++++
Sbjct: 165 PRFLRAPRGPVLEARLNPEQQAALDLADRAEDLALVHGPPGTGKT----TVLVEVIRRAA 220
Query: 548 --GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--------------EAIDSPVS 591
G VL APSN+AVD L E++ GL VRV +R EA ++
Sbjct: 221 ARGESVLAAAPSNLAVDNLVERLAAAGLACVRVGHPARVLPGLLEHTLEARVEAHEAARI 280
Query: 592 FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR---------YRMLKKNAEKSLLD 642
L +Q + + + +K Q K G S++ E+ R L+ AE +L+
Sbjct: 281 AQGLVDQA--LALRRDARKRRQ-KRGPGRFSASREQEREARALLAEARRLEARAEAEVLE 337
Query: 643 NADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGP 702
A V+ T P L +F ++DE+ QA EP + +L A + +L GDH QL P
Sbjct: 338 RAQVVLATLTSLDGPALAGRRFALAVLDEATQAVEPAAYL-ALLRADRAVLAGDHLQLPP 396
Query: 703 VVMCKKAARAGLSQSLFERLV-VLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
V+ A GL SLFERLV G R L Q+RM+ + FPS Y G+L+
Sbjct: 397 TVLSAAAQEGGLGVSLFERLVEAHGDRARVMLAEQHRMNARIMAFPSEALYGGALRAHPA 456
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRC 817
A R + D P T G +EE S N EA R +
Sbjct: 457 AAGRAID---------DAPFELVDTSGRGFEEETPEGSDSKQNTGEAELAAAEVRRLLAA 507
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+ P + VI+PY+ Q VQ ++ L ++ +EV +VD FQGREK+ +++S VR
Sbjct: 508 GLAPGDVAVISPYDAQ----VQRLRQL--LAEEVEAGLEVDTVDGFQGREKEAVVVSLVR 561
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
SN+ +GFL D RR+NVALTRA+ ++V+G+ +S+ P + + L
Sbjct: 562 SNEAGEVGFLADVRRMNVALTRARAKLVVVGDGSTVSRHPFYRSFLE 608
>gi|167386218|ref|XP_001737669.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899439|gb|EDR26028.1| hypothetical protein EDI_014080 [Entamoeba dispar SAW760]
Length = 964
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 174/296 (58%), Gaps = 12/296 (4%)
Query: 640 LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
+L+ + IC T +LK KF + ++DE+ Q+ EPE + +I ++ +L+GD Q
Sbjct: 615 ILNGIECICSTLTICTRSTILKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQQ 673
Query: 700 LGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
L P + +A AG +S+FER + I+ L+ QYRMHP + +F + FY L+NG
Sbjct: 674 LQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAIVEFSNKMFYSSKLENG 733
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V ++R S+I +P P++F G+E+ SGTSY N E +++I ++
Sbjct: 734 VSNEDRFDSRIINFFPDYTNPIMFINCDGREQYGSSGTSYNNEGEVLIIKQIVDGLLKNK 793
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+K +IG+I+PY+ Q+ + Q+ I +I+VA++D FQG EK+ II SCVRS
Sbjct: 794 VKENEIGIISPYQAQQELISQY----------ISTKIKVANIDGFQGNEKEYIIFSCVRS 843
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
N GIGF++D +RLNVALTRAK G+IVIGN + L +W+ L++ + + L E
Sbjct: 844 NQTLGIGFVSDYKRLNVALTRAKCGLIVIGNIQTLIGSKVWDMLIHHFYLRDALFE 899
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 485 DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV 544
D + + L ++ PNL +LN Q+ A+ +A+ +SL+ GPPGTGKT + +I L+
Sbjct: 345 DTITYDEILTDKYNIPNLSNLNDYQIKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLI 404
Query: 545 ---------KQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLAL 595
+ +LVCA SN AVD + K+ G+ +R+ A + F
Sbjct: 405 YNKHRFYNRNRAERRLLVCASSNNAVDVICSKLIEKGIPTIRIVADDQ--------FENC 456
Query: 596 HNQIRNMEMNSELKKLLQLKEETG 619
++IR +S LKK ++ E+ G
Sbjct: 457 SDKIRE---HSLLKKAIEFTEKRG 477
>gi|325095786|gb|EGC49096.1| helicase SEN1 [Ajellomyces capsulatus H88]
Length = 2150
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 251/529 (47%), Gaps = 110/529 (20%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------------------- 544
+N +Q AV+ A+ +LIQGPPG+GKT T +V ++
Sbjct: 1293 VNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPGSSGDFR 1352
Query: 545 ----KQTGSPVLVCAPSNIAVDQL---------TEKIHRTGLKVVRVCAKSREAIDSPVS 591
T +LVCAPSN AVD+L T + + V+R+ +AI+S V
Sbjct: 1353 PATRATTSGKLLVCAPSNAAVDELVMRFKEGVITSSGQKHNISVIRLGRS--DAINSNVM 1410
Query: 592 FLAL----------------------------------HNQIR---------NMEMNSEL 608
+ L N+IR + SEL
Sbjct: 1411 DVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIRERLDQCRAKGQHVPSEL 1470
Query: 609 KKLLQL-KEETGELSSADE----------KRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
++ L K + +LS A + + + +K ++ +++ + VIC T G+G
Sbjct: 1471 EREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGHE 1530
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A+R
Sbjct: 1531 MFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQYE 1590
Query: 716 QSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
QSLF R+ + L+ QYRMHPE+S+FPS FY+G L++G D KL PW
Sbjct: 1591 QSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSTAFYDGRLKDG--PDMAKLRV--RPWH 1646
Query: 775 VPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIGVIT 828
+ P F+ QG A G S VN R E++T ++ K +IG+IT
Sbjct: 1647 SSELLGPYRFFDVQGLHSSAPKGHSLVNLAELRVAMKLYERLTIDYMTYDFK-GKIGIIT 1705
Query: 829 PYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
PY+GQ ++ M Q+ I+ +E + DAFQGRE ++II SCVR+++ +GIGF
Sbjct: 1706 PYKGQ----LREMKNQFANKYGNSIFTTVEFNTTDAFQGRECEVIIFSCVRASN-RGIGF 1760
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
L D RR+NV LTRAK + V+GN + L + WN L+ + + + +G
Sbjct: 1761 LADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQG 1809
>gi|393786855|ref|ZP_10374987.1| hypothetical protein HMPREF1068_01267 [Bacteroides nordii
CL02T12C05]
gi|392658090|gb|EIY51720.1| hypothetical protein HMPREF1068_01267 [Bacteroides nordii
CL02T12C05]
Length = 634
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 261/533 (48%), Gaps = 57/533 (10%)
Query: 432 SAGAPTE--ATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF 489
+AGA E T V + TS+ M AL + A + LLG V
Sbjct: 124 NAGALLEIQGTDRLGVQLYFDETSYHAMFEALEDVIRAKNNRLAELRDTLLG--TLSVHQ 181
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTG 548
R P F P LN +Q AV + + ++++ GPPGTGKT T +Y+ + +
Sbjct: 182 RELYPVRF-----PWLNSTQEEAVNKVLCTKDVAIVHGPPGTGKTTTLVEAIYETLHREN 236
Query: 549 SPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSEL 608
VLVCA SN AVD ++EK+ G+ V+R+ +R D +SF R E +
Sbjct: 237 Q-VLVCAQSNTAVDWISEKLVDRGVPVLRIGNPTR-VNDKMLSF----TYERRFESHPAY 290
Query: 609 KKLLQLKEETGELSSADEKRYRMLKKNAE------------------KSLLDNADVICCT 650
+L +++ E+S K + ++N ++L + V+ T
Sbjct: 291 TELWGIRKSIREMSGRIRKGSHIERENMRNHISHLRDRATELEILINEALFSSTRVVAST 350
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
V + L +F ++ IDE+ QA E C + I ++I GDHCQL P + C +AA
Sbjct: 351 LVSSNHRILNGRRFSTLFIDEAAQALEAACWI-AIRKTDRVIFAGDHCQLPPTIKCIEAA 409
Query: 711 RAGLSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
R GL+ +L E+ V +P L+VQYRM+ + +FPS +FY L++ +R +
Sbjct: 410 RGGLNHTLMEK--VATNKPSSVSLLKVQYRMNESIMRFPSEWFYNNQLESAPEIRQRGI- 466
Query: 768 KIDFPWPVPDKPMLFYVT---QGQEEIAGSGTSYVNRTEAS----NVEKITTRFIRCGMK 820
+DF D PM++ T + EE G +N+ EA+ +E + +
Sbjct: 467 -LDF-----DTPMIWIDTSEMECHEEFVGESFGRINKPEANLLLQELESYIQKIGENRVL 520
Query: 821 PEQI--GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
EQI G+I+PY+ Q +L ++ S + I V +VD FQG+E+D+I +S VR+
Sbjct: 521 DEQIDFGLISPYKAQVQYLRNKIK-SSSFFRRFRPLITVNTVDGFQGQERDVIFISLVRA 579
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
N+ IGFLND RR+NVA+TRA+ ++++GN L K ++ L+ + +++ V
Sbjct: 580 NESGQIGFLNDLRRMNVAITRARMKLVILGNAATLIKHTFYHKLMEYIQKETV 632
>gi|375084259|ref|ZP_09731266.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
gi|374741144|gb|EHR77575.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
Length = 656
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 172/500 (34%), Positives = 255/500 (51%), Gaps = 82/500 (16%)
Query: 493 LPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
+P+ F P +LN +Q A+ A+ LI GP GTGKT T A ++ Q VK+ GS V
Sbjct: 160 IPQEFE-PFDKNLNPTQRKAINLALGSEDFFLIHGPFGTGKTRTLAELILQEVKR-GSKV 217
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLAL-------HNQIRNMEM 604
L A SN+AVD L E++ +K+VR+ SR + S LA + ++R +
Sbjct: 218 LATAESNVAVDNLVERLW-GKVKLVRLGHPSRVSKHLKESTLAFQVESHERYRRVRELRN 276
Query: 605 NSEL---------------------KKLLQLKE--------------ETGE---LSSADE 626
+E K++L+L E E + L+ +
Sbjct: 277 KAERLAMMRDQHKKPTPSLRRGLTNKQILKLAEKGRGARGVPAKDVKEMAQWIVLNEEVQ 336
Query: 627 KRYRMLKKNAEKSLL---DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
K Y+ K E+ + D DVI T A + ++F +IDE+ QAT P ++P
Sbjct: 337 KLYKFAGKIEEEIIREIIDKTDVILSTNSSAALEFIRDVEFDVAIIDEASQATIPSVLIP 396
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPEL 742
I AK+ +L GDH QL P ++ ++A LS++LFE+L+ L + LE+QYRM+ +L
Sbjct: 397 -IAKAKRFVLAGDHKQLPPTILSEEAKE--LSETLFEKLIDLYPEKAKMLEIQYRMNEKL 453
Query: 743 SKFPSNFFYEG------SLQNGVCADERKLSKIDF--PWPV---PDKPMLFYVTQGQ--- 788
+FPS FY G S++N AD K+ + F PW ++P++F T +
Sbjct: 454 MEFPSREFYNGKIKADESVKNITLAD-LKVREPFFGEPWDSILKREEPLVFVDTAERRDK 512
Query: 789 -EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
E TS N EA V++I + R G+K E IG+ITPY+ Q L++ +
Sbjct: 513 WERQRKGSTSRENPLEALLVKEIVEKLFRMGVKEEWIGIITPYDDQ-VDLIRSL------ 565
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
+ +EIEV +VD +QGREK++I++S VRSN +GFL D RRLNVALTRAK +I I
Sbjct: 566 ---VGEEIEVHTVDGYQGREKEVIVLSFVRSNKEDELGFLTDLRRLNVALTRAKRKLIAI 622
Query: 908 GNPKVLSKQPLWNNLLNFYK 927
G+ + LS P + L F K
Sbjct: 623 GDSETLSTHPTYKRFLEFVK 642
>gi|353238887|emb|CCA70818.1| related to SEN1 protein [Piriformospora indica DSM 11827]
Length = 1917
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 248/512 (48%), Gaps = 106/512 (20%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQ---------TGSP---- 550
LN Q AV ++ R SLIQGPPGTGKT T +V + G P
Sbjct: 1282 LNYPQARAVLSSLHTRGFSLIQGPPGTGKTSTICGLVGAFLSSRDSATTSITVGGPSQKP 1341
Query: 551 ----VLVCAPSNIAVDQLTEKIH---------RTGLKVVRVCAKSREAI----------- 586
VLVCAPSN A+D++ +IH RT +VVR+ S ++
Sbjct: 1342 IPRKVLVCAPSNAAIDEVARRIHEGVWKSDGQRTRPQVVRLGPISAMSLGVRDISLDRMV 1401
Query: 587 ------------DSPVSFLALH----------------------NQIRNMEMNSELKKLL 612
DS + +L N R +E++ EL++L
Sbjct: 1402 ENRLSGTESTGEDSSIEVSSLRGRLAHIKQLRHEKQMELSAVNDNTARALELDRELRELT 1461
Query: 613 QLKEE-TGELSSA-DEKRYRM-----LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
+ + T +L++A D+ + RM K+ A +L ADV+CCT G+G + + +F
Sbjct: 1462 SNRTQLTSQLNAALDKGKERMRAADSAKRKARVEILSEADVVCCTLSGSGHEFIDRTEFD 1521
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-V 724
++IDE+ QA E ++P+ +++ ILVGD QL P V+ + A + G ++SLF RL
Sbjct: 1522 LVIIDEAAQAIELSSLIPLKFASQRCILVGDPQQLPPTVLSQTATKMGYNRSLFVRLQDS 1581
Query: 725 LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG--VCADERKLSKIDFPWPVPDKPMLF 782
+ R L +QYRMHPE+S+ PS FYE LQ+G + R+ PW ++
Sbjct: 1582 MPDRIHLLSIQYRMHPEISRLPSVLFYERKLQDGPDMAVKTRR------PWHDDSNLGVY 1635
Query: 783 --YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ--IGVITPYEGQ----- 833
+ +G EE A G S N E ++ R P + IG+I+ Y Q
Sbjct: 1636 RLFDIRGNEEQADLGYSQYNLAEVKAALELYKRLSATLRTPTEVTIGIISMYRAQLTKLR 1695
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH-QGIGFLNDPRR 892
AF+ ++ + +I +++ +VD FQG+EKD+II+SCVR+ + IGFL+D RR
Sbjct: 1696 DAFIARYGR-------EILSKVDFNTVDGFQGQEKDVIILSCVRAGPNVSSIGFLSDARR 1748
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQ-PLWNNLL 923
+NVA+TR + + ++G+ L + LW+ ++
Sbjct: 1749 INVAITRCRSSLFILGDAATLRRSDQLWSKII 1780
>gi|238499341|ref|XP_002380905.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
gi|220692658|gb|EED49004.1| tRNA-splicing endonuclease, putative [Aspergillus flavus NRRL3357]
Length = 2122
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 246/528 (46%), Gaps = 104/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVK----------------- 545
++N +Q A+K A+ +LIQGPPG+GKT T +V L+
Sbjct: 1226 NVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTGVG 1285
Query: 546 --------QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV--------------------- 576
T +LVCAPSN AVD+L + + G+K +
Sbjct: 1286 NIKPPPRTTTSKKLLVCAPSNAAVDELVMRF-KAGVKTIQGRHEKLSVIRLGRSDAINTN 1344
Query: 577 ------------RVCAKSR-EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
R+ SR ++ + + + + ++ + KL Q + + + +
Sbjct: 1345 VLDVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSKLDQCRAQGLPVPA 1404
Query: 624 ADEKRYRML--KKNAEKSLLDN--------------------------ADVICCTCVGAG 655
E+ + +L KK A +DN A VIC T G+G
Sbjct: 1405 ELEREFELLKKKKTALSQEIDNARDKNHSAARDADLNRRKIQQEIIDGAHVICATLSGSG 1464
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A++
Sbjct: 1465 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1524
Query: 714 LSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ R L++QYRMHPE+S +P N FY+G LQ+G D +L P
Sbjct: 1525 YEQSLFVRMQSNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDG--PDMARLRA--RP 1580
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVI 827
W + P F+ QG + A G S VN E ++ R + + +IG+I
Sbjct: 1581 WHQSELLSPYRFFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDFQGFDFSGKIGII 1640
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L H + I+ I+ + DAFQGRE ++II SCVR+++ +GIGFL
Sbjct: 1641 TPYKGQLRELKTH--FAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVRASN-KGIGFL 1697
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+D RR+NV LTRAK + V+GN + L + WN+L+ + + V +G
Sbjct: 1698 SDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDG 1745
>gi|391873505|gb|EIT82535.1| tRNA-splicing endonuclease positive effector [Aspergillus oryzae
3.042]
Length = 2123
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 246/528 (46%), Gaps = 104/528 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVK----------------- 545
++N +Q A+K A+ +LIQGPPG+GKT T +V L+
Sbjct: 1288 NVNPAQAKAIKSALDNDAFTLIQGPPGSGKTKTIVALVGALLSGVLGNQGVTISRPTGVG 1347
Query: 546 --------QTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV--------------------- 576
T +LVCAPSN AVD+L + + G+K +
Sbjct: 1348 NIKPPPRTTTSKKLLVCAPSNAAVDELVMRF-KAGVKTIQGRHEKLSVIRLGRSDAINTN 1406
Query: 577 ------------RVCAKSR-EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
R+ SR ++ + + + + ++ + KL Q + + + +
Sbjct: 1407 VLDVTLDELVNARLSQTSRKDSGERDLQKIYMEHKAADTAFKETRSKLDQCRAQGLPVPA 1466
Query: 624 ADEKRYRML--KKNAEKSLLDN--------------------------ADVICCTCVGAG 655
E+ + +L KK A +DN A VIC T G+G
Sbjct: 1467 ELEREFELLKKKKTALSQEIDNARDKNHSAARDADLNRRKIQQEIIDGAHVICATLSGSG 1526
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A++
Sbjct: 1527 HEMFQNLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASKFQ 1586
Query: 714 LSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ R L++QYRMHPE+S +P N FY+G LQ+G D +L P
Sbjct: 1587 YEQSLFVRMQSNHPRDVHLLDIQYRMHPEISAYPRNAFYDGKLQDG--PDMARLRA--RP 1642
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVI 827
W + P F+ QG + A G S VN E ++ R + + +IG+I
Sbjct: 1643 WHQSELLSPYRFFDVQGLHQSAAKGHSLVNMAELRVAMQLYERLVSDFQGFDFSGKIGII 1702
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
TPY+GQ L H + I+ I+ + DAFQGRE ++II SCVR+++ +GIGFL
Sbjct: 1703 TPYKGQLRELKTH--FAAKYGNAIFNMIDFNTTDAFQGRESEVIIFSCVRASN-KGIGFL 1759
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+D RR+NV LTRAK + V+GN + L + WN+L+ + + V +G
Sbjct: 1760 SDIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNSLIKDARRRSVYTDG 1807
>gi|154280609|ref|XP_001541117.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411296|gb|EDN06684.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 2150
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 170/534 (31%), Positives = 256/534 (47%), Gaps = 110/534 (20%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV---------YQLVKQTGS----- 549
+N +Q AV+ A+ +LIQGPPG+GKT T +V Q + + GS
Sbjct: 1293 VNPAQAKAVRSAMDNDAFTLIQGPPGSGKTKTIVALVGAILTPVFAEQKITRPGSSGDFR 1352
Query: 550 PV---------LVCAPSNIAVDQL---------TEKIHRTGLKVVRVCAKSREAIDSPVS 591
PV LVCAPSN AVD+L T + + VVR+ +AI+S V
Sbjct: 1353 PVTRATTCGKLLVCAPSNAAVDELVMRFKEGVITSSGQKQNISVVRLGRS--DAINSNVM 1410
Query: 592 FLAL----------------------------------HNQIR---------NMEMNSEL 608
+ L N+IR + SEL
Sbjct: 1411 DVTLDELVNAKLGQNGRKNGSEKDLQTYYSEHKGACTQFNEIRERLDQCRAKGQHVPSEL 1470
Query: 609 KKLLQL-KEETGELSSADE----------KRYRMLKKNAEKSLLDNADVICCTCVGAGDP 657
++ L K + +LS A + + + +K ++ +++ + VIC T G+G
Sbjct: 1471 EREFDLLKRKKAQLSQAIDNARDSNQAAARNADLARKKVQQEIINGSHVICATLSGSGHE 1530
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+ K A+R
Sbjct: 1531 MFQSLSIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLSKVASRFQYE 1590
Query: 716 QSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
QSLF R+ + L+ QYRMHPE+S+FPS FY+G L++G D KL PW
Sbjct: 1591 QSLFVRMQANHPKDVHLLDTQYRMHPEISRFPSAAFYDGRLKDG--PDMAKLRV--RPWH 1646
Query: 775 VPD--KPMLFYVTQGQEEIAGSGTSYVN----RTEASNVEKITTRFIRCGMKPEQIGVIT 828
+ P F+ QG A S VN R E++T ++ K +IG+IT
Sbjct: 1647 SSELLGPYRFFDVQGLHSSAPKSHSLVNLAELRVAMKLYERLTIDYLTYDFK-GKIGIIT 1705
Query: 829 PYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
PY+GQ ++ M Q+ + I+ +E + DAFQGRE ++II SCVR+++ +GIGF
Sbjct: 1706 PYKGQ----LREMKNQFANKYGSSIFTTVEFNTTDAFQGRECEVIIFSCVRASN-RGIGF 1760
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNL 940
L D RR+NV LTRAK + V+GN + L + WN L+ + + + +G + L
Sbjct: 1761 LADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDAQSRNLYTQGDILKL 1814
>gi|449437623|ref|XP_004136591.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449501878|ref|XP_004161482.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 647
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 230/456 (50%), Gaps = 48/456 (10%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+L+ SQ A+ A+ + + L+ GPPGTGKT T I+ Q VK+ GS +L CA SNIAVD
Sbjct: 196 NLDHSQKDAISKALSGKNVFLLHGPPGTGKTTTVVEIILQEVKR-GSKILACAASNIAVD 254
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNMEMNSELKKLL 612
+ E++ +K+VRV +R A+D+ V +L N IR EM + KLL
Sbjct: 255 NIVERLVPHRVKLVRVGHPARLLPQVLESALDAQVLRGDNSSLANDIRK-EMKALNGKLL 313
Query: 613 QLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ K+ E LS + R ++ A ++ N+DV+ T GA +L I
Sbjct: 314 KAKDRNTRREIQKELRTLSKEERNRQQL----AVTDVIKNSDVVLTTLTGAFSRKLNNIS 369
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA E C + +L A + IL GDH QL P + +A + GL ++LFERL
Sbjct: 370 FDLVIIDEAAQALEIACWI-ALLKASRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLA 428
Query: 724 VLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI-DFPWPVPDKPM 780
+ L VQYRMH + + S Y+ ++ L + D +P
Sbjct: 429 EMYGNEVTSMLTVQYRMHELIMDWSSKELYDSKIKAHSSVAAHMLYDLEDVKKTSSTEPT 488
Query: 781 LFYVTQGQEEIAG--------SGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
L + +IAG S +N EA R I+ G++P IG+ITPY
Sbjct: 489 LLLI-----DIAGCEMEERKDEEESTLNEGEAEVAMAHAKRLIQSGVQPSDIGIITPYAA 543
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
Q L L ++IE+++VD FQGREK+ II+S VRSN + +GFL+D RR
Sbjct: 544 QVVLLKTLRSNDDKL-----KDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 598
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
+NVA+TRA+ ++ + ++ L+ +++E
Sbjct: 599 MNVAVTRARRQCCLVCDTDTVTYDAFLKRLIEYFEE 634
>gi|367011180|ref|XP_003680091.1| hypothetical protein TDEL_0B07510 [Torulaspora delbrueckii]
gi|359747749|emb|CCE90880.1| hypothetical protein TDEL_0B07510 [Torulaspora delbrueckii]
Length = 667
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 265/551 (48%), Gaps = 69/551 (12%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKF----AVD 467
G V KI D E + A A A+ V + ++ RM+ ++RK +V
Sbjct: 111 GVVFKITDRQLVITTNENQEDAAARLFASNRLYVLKTTNTITYQRMESSMRKLGEFESVP 170
Query: 468 DQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGP 527
+ ++ Y+ + + F P + + + LN Q A++ A+ + +I GP
Sbjct: 171 NNKITQYL--------LTDRPFLAQKPSNDVSFHNKSLNEPQQDAIRFALANDICIIHGP 222
Query: 528 PGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT--GLKVVRV------- 578
PGTGKT T ++ QL + G +LVC PSN+AVD + E++ + G ++R+
Sbjct: 223 PGTGKTYTLIELIQQLCDK-GQRILVCGPSNMAVDTILERLAKVLPGNLLLRIGHPARLL 281
Query: 579 ---CAKSREAIDSPVSFLALHNQIRNMEMN---SELKKLLQLKEETGELSSADEKRYRML 632
A S + + S + IR+ E++ + +KK+ +E + E R + L
Sbjct: 282 DSNLAHSLDILSKSGSAGGILKDIRD-EIDRKIASIKKIKSSRERRQGWNDVKELR-KEL 339
Query: 633 KKNAEKSLLD---NADVICCTCVGAGDPRLLKIK------FHSILIDESMQATEPECMVP 683
++ K ++D A VI T G+ L + F ++IDE Q+ EP+C +P
Sbjct: 340 RQRERKVIVDLILEARVIVATLHGSSSRELCSVYHQTPKLFDCLIIDEVSQSLEPQCWIP 399
Query: 684 VILGAK----QLILVGDHCQLGPVVMCKKAA--RAGLSQSLFERLVVLGIRPFR--LEVQ 735
+I + +L+L GD+ QL P + + A + L +LF+RLV F+ L VQ
Sbjct: 400 LISHYRSDISKLVLAGDNKQLPPTIKTEDDANIKKTLQTTLFDRLVAYYGDSFKRLLSVQ 459
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI--DFPW----PVPDKPMLFYVTQGQE 789
YRM+ E+ KFPS Y G L AD+ +KI D P D P ++Y TQG E
Sbjct: 460 YRMNEEIMKFPSETLYNGQL----AADDSVATKILSDLPGVDSNDDTDAPFIWYDTQGDE 515
Query: 790 EIAGSG-----TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
I S S N EA V+ R I + IGVI PY Q L + +
Sbjct: 516 FIESSQEESVVASKFNENEALLVKDHIQRLIDSNVSQNSIGVIAPYSAQVTILKHFLSEK 575
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
+ +IE+++VD FQGREK++II+S VRSND IGFL D RRLNVA+TR K +
Sbjct: 576 -------FPQIEISTVDGFQGREKEVIILSLVRSNDKFEIGFLKDERRLNVAMTRPKKQL 628
Query: 905 IVIGNPKVLSK 915
VIGN + L +
Sbjct: 629 CVIGNIETLQR 639
>gi|83816360|ref|YP_444497.1| DNA helicase [Salinibacter ruber DSM 13855]
gi|83757754|gb|ABC45867.1| putative DNA helicase [Salinibacter ruber DSM 13855]
Length = 707
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 170/571 (29%), Positives = 252/571 (44%), Gaps = 107/571 (18%)
Query: 438 EATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHF 497
E +G VD + RMQ AL K D ++ + +V P
Sbjct: 155 EVVSGLRVDLYVNDIPYQRMQDALAKLPTADGALK----------QLRDVSTGVASPAAT 204
Query: 498 SAPNLPD-----LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
+ D LN +Q AV+ A+ + LI GPPGTGKT T+ ++ Q V + G V
Sbjct: 205 EPAPIDDWHNSALNDAQRRAVRKAVATDDVHLIHGPPGTGKTTTATEVLQQCVDR-GESV 263
Query: 552 LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPV-------------- 590
L A SN AVD + + G VVR+ +R +D+ +
Sbjct: 264 LATAASNTAVDNVVAFLAEQGTDVVRLGHPARVNDRLRTHTLDAQIEDTDTHRRSQQKRE 323
Query: 591 -SFLALHNQ----------IRNM--------------------EMNSELKKLLQLKEETG 619
+F L Q R M E E+ L L+E
Sbjct: 324 KAFAVLDRQEDLTAPSGRWRRGMSDRKIKERAEQGRGSRGVPPERIEEMAAWLALQERAD 383
Query: 620 ELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPE 679
L E L++ A +L ADV+C T AG L F +++IDE+ QAT P
Sbjct: 384 ALFDEAE----ALEQEAIDEVLGAADVVCSTNSTAGSDLLDGHTFDTLVIDEATQATAPS 439
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV---------VLGIRPF 730
C +P + A++ +LVGDH QL P + ++AAR GL +LFERL IR
Sbjct: 440 CWIP-MTHARRAVLVGDHKQLPPTIQNQEAARRGLRHTLFERLAHHHETAPEAPGSIRSL 498
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP---WPV--------PDKP 779
L QYRMH + FP+ FY+G L+ A R L+ + P P P+
Sbjct: 499 -LRRQYRMHETIMGFPNRTFYDGRLEADDTARHRTLADLGVPEHALPADERRAILDPEAS 557
Query: 780 MLFYVTQGQE--EIAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
++F T G + E SG+ S N EA + ++TT + G+ P I VI+PY+ Q
Sbjct: 558 LVFVDTSGIDAPEHQRSGSHSRENPREADLIAQLTTALLEAGVAPSAIAVISPYDDQVDR 617
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
+ + + G E +VD FQGREK+++++S V SND IGFL++PRR NVA
Sbjct: 618 IDRALAPDGP---------ETDTVDGFQGREKEIVLLSLVHSNDRGAIGFLDEPRRFNVA 668
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+TRA+ +V+G+ ++ + + + +
Sbjct: 669 VTRAERKAVVVGDASTVAAADVLGAFVRYAE 699
>gi|14521437|ref|NP_126913.1| DNA helicase, [Pyrococcus abyssi GE5]
gi|5458655|emb|CAB50143.1| DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 653
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 245/505 (48%), Gaps = 93/505 (18%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LNRSQ A+ A+ L+ GP GTGKT T ++ Q VK+ G+ VL A SN+AVD
Sbjct: 171 LNRSQRKAISKALGSEDFFLVHGPFGTGKTRTLVELIRQEVKR-GNKVLATAESNVAVDN 229
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE--- 620
L E++ R+G+K+VR+ SR + + L I E+ EL++L + + E
Sbjct: 230 LVERLSRSGIKIVRIGHPSR--VSKHLHETTLAYLITQHELYGELRELRVIGQSLAEKRD 287
Query: 621 ------------------LSSADEKR-----------------------------YRMLK 633
+ A+ KR R L+
Sbjct: 288 TYTKPTPKFRRGLSDEEIIKLAERKRGARGLSARLIMEMAEWIKLNRQVQKAFDDARKLE 347
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ + ++ ADV+ T A + + +IDE+ Q+T P ++P + ++ +L
Sbjct: 348 ERIARDIIREADVVLTTNSSAALEVVDYDTYDVAIIDEATQSTIPSILIP-LNKVERFVL 406
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE---VQYRMHPELSKFPSNFF 750
GDH QL P ++ +A LS++LFE L+ P++ E VQYRM+ + +FPS F
Sbjct: 407 AGDHKQLPPTILSLEAQE--LSRTLFEGLIER--YPWKSEMLVVQYRMNERIMEFPSKEF 462
Query: 751 YEGSLQNGVCADE-------RKLSKIDFP---WPV---PDKPMLFYVTQGQE---EIAGS 794
Y G + ADE R L + P W P+ ++F T E E
Sbjct: 463 YGGK----IIADESVRGITLRDLVEYQSPNDSWGKILNPENVIVFIDTSKAENKWERQRR 518
Query: 795 GT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
G+ S N EA V KI + + G+KPE IGVITPY+ QR + K+ +
Sbjct: 519 GSESRENPLEAEIVAKIVDKLLSIGVKPEWIGVITPYDDQRDLI----------SMKVPE 568
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
++EV +VD +QGREK++II+S VRSN IGFL D RRLNV+LTRAK +IV+G+ L
Sbjct: 569 DVEVKTVDGYQGREKEVIILSLVRSNKLGEIGFLKDLRRLNVSLTRAKRKLIVVGDSSTL 628
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLN 938
S + ++ F+KE+ +E P +
Sbjct: 629 SSHETYKKMIEFFKEKGCFIEFPFS 653
>gi|254579116|ref|XP_002495544.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
gi|238938434|emb|CAR26611.1| ZYRO0B13860p [Zygosaccharomyces rouxii]
Length = 2130
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/521 (30%), Positives = 258/521 (49%), Gaps = 111/521 (21%)
Query: 504 DLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIV-YQLVKQTGSP----------- 550
+LN SQ A+ + + + SLIQGPPGTGKT T IV Y L ++ P
Sbjct: 1299 NLNLSQAAAIVNTVLKEGFSLIQGPPGTGKTKTILGIVGYFLSTRSSLPSNAIKTPGADS 1358
Query: 551 -------------VLVCAPSNIAVDQLTEKI-----HRTGL----KVVRVCAKSREAIDS 588
VL+CAPSN AVD++ ++ ++ G+ +VRV +A+++
Sbjct: 1359 SNMTTDQLLKKQKVLICAPSNAAVDEIVLRLKEGVCNKEGMLFKPNIVRVGRS--DAVNA 1416
Query: 589 PVSFLALHNQI------RNMEM--NSELKK------------------------------ 610
+ L + +N E N EL+K
Sbjct: 1417 AIKDFTLEELVDKQVSQKNYEFSKNPELEKKFNEAVHKRRELRAKLDAENGTPTSTMSTE 1476
Query: 611 -----LLQLKEETGELSSADEKR----------YR---MLKKNAEKSLLDNADVICCTCV 652
L+++E + +L+ +R YR + ++NA+ L +D+IC T
Sbjct: 1477 DIANLQLKIRELSRQLNELGRERDLMRERNSVNYRNRDLDRRNAQARTLAKSDIICSTLS 1536
Query: 653 GAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
G+ L L +KF +++IDE+ Q TE ++P+ G ++ I+VGD QL P V+ A+
Sbjct: 1537 GSAHDVLSSLGVKFDTVIIDEACQCTELSSIIPLRYGGRRCIMVGDPNQLPPTVLSGAAS 1596
Query: 711 RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD---ERKLS 767
+QSLF R+ I P+ L+VQYRMH +SKFPS FY+ L++G D +R
Sbjct: 1597 SFKYNQSLFVRMEK-NITPYLLDVQYRMHSSISKFPSMEFYKSRLKDGPEVDTLNQRPWH 1655
Query: 768 KIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN----VEKITTRFIRCGMKPEQ 823
++ + P F + G+E+ + SYVN E VE + +F + +
Sbjct: 1656 ELKYSRPY----KFFDILTGREQQSAKTMSYVNLDEIKVAMELVEYLFHKFDKIDFT-SK 1710
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ- 882
IGVI+PY+ Q + + + ++ I +E++ ++D FQG+EK++II+SCVR++D +
Sbjct: 1711 IGVISPYKEQASRMRR--EFLSRFGGTITREVDFNTIDGFQGQEKEIIIISCVRADDTKS 1768
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
+GFL D RR+NVALTRAK + ++G+ K L K LWN L+
Sbjct: 1769 SVGFLRDFRRMNVALTRAKTSMWILGHQKSLVKNKLWNRLI 1809
>gi|325189317|emb|CCA23837.1| DNA polymerase alphaassociated DNA helicase A putati [Albugo
laibachii Nc14]
Length = 931
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 177/623 (28%), Positives = 294/623 (47%), Gaps = 111/623 (17%)
Query: 393 GDELKLRYSYDAS---KTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTG----FSV 445
GD +++R + S +T + V+ + F + ++ S + +E+ G +V
Sbjct: 80 GDIVRIRNASSTSDKIQTTNQCTSVVTKLEEFCIHIAMQ-ASDSETKSESDIGGRGAITV 138
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL--- 502
D + +T++ ++ L D H + +LF LP+ + ++
Sbjct: 139 DRLVNTTTYSKLSATLEGICKGD-------------HPLISILFENQLPQWSESRSIDPF 185
Query: 503 -PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN SQ+ ++K A+ + +++I GPPGTGKT T ++ Q V VLVCAPSNIA
Sbjct: 186 NPHLNTSQLESIKLALASKDIAIIHGPPGTGKTTTIVELILQAVIHNKQKVLVCAPSNIA 245
Query: 561 VDQLTEK------IHRTGLKVVRVCAKSR-------EAIDSPVS---FLALHNQIRNMEM 604
VD + EK I + ++++R+ +R D+ VS A+ + IR ME+
Sbjct: 246 VDTVLEKLSQCPAISQYKVRLLRIGHPARVTANVLQHCFDAQVSNAENTAIVDDIR-MEI 304
Query: 605 NSELKKLLQLKE--------ETGE------LSSADEKRYRMLKKNAEKSLLDNADVICCT 650
+ + ++E +TG+ L ++ K ++N ++LL + VI T
Sbjct: 305 QQMERTITNIREKARKQKRTQTGQTCDLYKLIRSNRKEIHKRERNVIQNLLQQSHVIFAT 364
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA 710
+GA L IKF +IDE+ QA E C +P I+ AK+++L GDHCQL P + +KAA
Sbjct: 365 NMGASTKLLKDIKFDIAIIDEAAQALEVSCWIP-IMKAKRVVLAGDHCQLPPTIKSRKAA 423
Query: 711 RAGLSQSLFERLVVLG-IRPFR-----LEVQYRMHPELSKFPSNFFYEGSLQN--GVCAD 762
GL +LF+RL+ +R F L++QYRMH ++ ++ S+ Y+ +L++ GV A
Sbjct: 424 EDGLQVTLFDRLMERAKMRGFEGIVKMLDIQYRMHDDICRWSSDAMYQSALKSFEGVAAR 483
Query: 763 E--------RKLSKIDFPWP---------VPDKPMLFYVTQG------QEEIAGS----- 794
R +++ P V + T G +E++ S
Sbjct: 484 TLQDLGTFVRHENEVFVTLPEGVFQVDPSVLGATLYLLDTAGCDLNEEKEQVDTSKFKKD 543
Query: 795 ----------GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
S N EA V+ ++ G+ I VITPY Q +Q
Sbjct: 544 KDARDIASVLSCSKSNPGEALLVDIHVRSLVQAGIPAHDIAVITPYNKQ-------VQVL 596
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
S ++ + +E+ SVD FQG EK+ ++MS VRSN GFL D RR+NVA+TRAK +
Sbjct: 597 KSRLSEAFPSLEIRSVDGFQGCEKEAVVMSLVRSNKKHEAGFLADERRMNVAVTRAKRHV 656
Query: 905 IVIGNPKVLSKQPLWNNLLNFYK 927
+I + + +S NL+ ++
Sbjct: 657 ALICDSETISAHSFLRNLVQHFE 679
>gi|50293567|ref|XP_449195.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528508|emb|CAG62165.1| unnamed protein product [Candida glabrata]
Length = 695
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 266/533 (49%), Gaps = 81/533 (15%)
Query: 451 STSFDRMQLALRKFA-VDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL----PDL 505
+ ++DRM LRK ++S+S I LL + L R +P + N+ +L
Sbjct: 147 TVTYDRMNSTLRKLKEFKEKSISNPIIDILLPTEGVKKL-RASIP-NAKKSNIQFFDENL 204
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV-KQTGSPVLVCAPSNIAVDQL 564
N SQ YA++ +++ LS+I GPPGTGKT T ++ QL+ K + S VLVCAPSNIAVD +
Sbjct: 205 NDSQKYAIRFSMENKLSIIHGPPGTGKTYTVVELIRQLISKDSTSRVLVCAPSNIAVDTI 264
Query: 565 TEKIHRTGLKVVRVCAK-------------------SREAIDSPVSFLALHNQIRNMEMN 605
E++ ++ +K R + S+E DS ++ N I +ME+
Sbjct: 265 LERLSKS-IKDKRWLLRIGHPARLLKTNWYHSLDILSKEGTDSA----SIINDI-SMEIT 318
Query: 606 SELKKLLQLKEETGELSSA------DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ + +K +GE A K R+ ++ L+ + V+ T G+ L
Sbjct: 319 KTIASIKSIKS-SGERRKAWAEVKQLRKELRLRERKVINDLIKQSRVVVATLHGSSSREL 377
Query: 660 LKIK-----------FHSILIDESMQATEPECMVPVI--LGAK--QLILVGDHCQLGPVV 704
F ++IDE Q+ EP+C +P+I L +K +L+L GD QL P +
Sbjct: 378 CNYYKSIEEGENDNLFDYVIIDEVSQSLEPQCWIPLISHLQSKITKLVLAGDSKQLPPTI 437
Query: 705 MCKKAARAG--LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
+ L +LF+RLV + F+ L +QYRM+ ++ +F S Y G L+
Sbjct: 438 KTNNNDKVMKVLGTTLFDRLVNMYGDEFKNLLNIQYRMNAKIMEFSSKAMYNGELKADSS 497
Query: 761 ADERKLSKIDFPW----PVPDKPMLFYVTQG---------QEEIAGSG-----TSYVNRT 802
+ LS D P D+P+++Y TQG ++E+ +S +N
Sbjct: 498 VENIVLS--DLPGVDSNEETDEPIIWYDTQGDDFPEVDEEEDELKSKSAKFLYSSKLNTN 555
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA V + I ++ + IG+I+PY Q + L + + G+ + +Y IE++SVD
Sbjct: 556 EAYLVLHHVRKLIESNVQQDCIGIISPYNAQVSLLKKLVN--GTEDSPVYPLIEISSVDG 613
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
FQGREK+ II+S VRSND +GFL + RRLNVA+TR K + VIGN + L +
Sbjct: 614 FQGREKECIILSLVRSNDKAEVGFLKEQRRLNVAMTRPKRQLCVIGNIETLQR 666
>gi|225678137|gb|EEH16421.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 2216
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 255/538 (47%), Gaps = 117/538 (21%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVK------------------ 545
+N +Q AV+ A+ +LIQGPPG+GKT T +V L+
Sbjct: 1298 VNPAQAKAVRSALDNDAFTLIQGPPGSGKTKTIIALVGALLSPILREQSISRSSSSSSTR 1357
Query: 546 ----------QTGSP------VLVCAPSNIAVDQLTEKI---------HRTGLKVVRV-- 578
+P +LVCAPSN AVD+L + H+ + VVR+
Sbjct: 1358 PALSSSTQSAAKNAPTFKSKKLLVCAPSNAAVDELVMRFKQGVISTDGHKREISVVRLGR 1417
Query: 579 ---------------------CAKSR-------------EAIDSPVSFLALHNQIRNMEM 604
+R E D+ F + +I
Sbjct: 1418 SDAINSNVIDVTLDELVNEKLSGTARKSGNEKDLQTFYLEHKDACTQFNGVRERIDQCRA 1477
Query: 605 NSEL------KKLLQLKEETGELSSA-DEKR---------YRMLKKNAEKSLLDNADVIC 648
SE ++ LK + +LS A D+ R +L++ ++++L++A V+C
Sbjct: 1478 KSERVPEELEREFDLLKRKKAQLSQAIDDARDSNLVAARNADLLRRKIQQNILEDAHVLC 1537
Query: 649 CTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMC 706
T G+G L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V+
Sbjct: 1538 ATLSGSGHEMFQSLDIEFETVIIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTVLS 1597
Query: 707 KKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
K A+R QSLF R+ + L+ QYRMHPE+S+FPS FY+G LQ+G D+ +
Sbjct: 1598 KVASRFQYEQSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPDMDKLR 1657
Query: 766 LSKIDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGM 819
S+I W + P F+ QG A G S VN E E++TT F
Sbjct: 1658 -SRI---WHKSELLGPYRFFDVQGLHSSAPKGHSLVNLAEVRVAMKLYERLTTDFKIYDF 1713
Query: 820 KPEQIGVITPYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
+IG+ITPY+GQ ++ M Q+ + I+ IE + DAFQGRE ++II SCVR
Sbjct: 1714 T-NKIGIITPYKGQ----LREMKNQFANKYGSSIFTMIEFNTTDAFQGRECEIIIFSCVR 1768
Query: 878 SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
++D +GIGFL D RR+NV LTRAK + V+G+ K L + W L++ +K++ +G
Sbjct: 1769 ASD-RGIGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQGEFWRGLISDAHTRKLVTQG 1825
>gi|401624864|gb|EJS42903.1| hcs1p [Saccharomyces arboricola H-6]
Length = 684
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 282/570 (49%), Gaps = 95/570 (16%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVD--FIWKST---SFDRMQLALRKFAV 466
G + K+ DN ++ + L+ S ATT +S + +I K+T ++ RM+ +RK +
Sbjct: 116 GVIYKMNDN---QITIALEESQEVV--ATTFYSYNKLYILKTTNTITYKRMESTMRKLS- 169
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAIQRPL 521
+ I +++ + +E R +P + N P+LN SQ A+ AI L
Sbjct: 170 ---EFGSLIQDKIIQYLTNE---RPFIPNTSQSQNAGFFQNPNLNDSQKTAINFAINNDL 223
Query: 522 SLIQGPPGTGKTVTSATIVYQLV-KQTGSPVLVCAPSNIAVDQLTEKIH---------RT 571
++I GPPGTGKT T ++ QL+ KQ +L+C PSNI+VD + E++ R
Sbjct: 224 TIIHGPPGTGKTFTLIELIQQLLTKQPEKRILICGPSNISVDTILERLTPLVPNNLLLRI 283
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKR--- 628
G + + R ++D L+ N I +++ E+ KL+Q E +L + ++R
Sbjct: 284 GHPARLLDSNKRHSLD----ILSKKNTIVK-DISHEIDKLIQ---ENKKLKNYKQRRENW 335
Query: 629 --YRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIK--------FHSILIDE 671
++L+K+ +K L+ + ++ T G+ L + F +++IDE
Sbjct: 336 NEIKLLRKDLKKREFKTIKDLIIQSRIVVTTLHGSSSRELCSLYRDDPDFKLFDTLIIDE 395
Query: 672 SMQATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCKKAARA--GLSQSLFERLVVLG 726
QA EP+C +P+I Q LIL GD+ QL P + + + L +LF+RL+
Sbjct: 396 VSQAMEPQCWIPLIAHQNQFSKLILTGDNKQLPPTIKTEDDQKVIHNLETTLFDRLI--K 453
Query: 727 IRPFR-----LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP--------- 772
P R L VQYRM+ ++ +FPS Y G L V R L ID P
Sbjct: 454 NFPKREMVKFLNVQYRMNEKIMEFPSQSMYHGKLLADVTVANRLL--IDLPNVDVTPFDD 511
Query: 773 --WPVPDKPMLFYVTQGQE--EIAGSGT---SYVNRTEASNVEKITTRFIRCGMKPEQIG 825
P+++Y TQG E E A T S N E + V++ + E IG
Sbjct: 512 DDDVDTKLPLIWYDTQGDEFPETADGATILGSKYNEGEIAIVKEHIQSLRSSNVPQESIG 571
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
+I+PY Q V HM+ K+ +IE+++VD FQGREKD++I+S VRSN+ +G
Sbjct: 572 IISPYSAQ----VSHMKRLIHDELKL-TDIEISTVDGFQGREKDVVILSLVRSNEKFEVG 626
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
FL + RRLNVA+TR + ++V+GN + L +
Sbjct: 627 FLKEERRLNVAMTRPRRQLVVVGNIEALQR 656
>gi|380742039|tpe|CCE70673.1| TPA: DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 629
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 245/505 (48%), Gaps = 93/505 (18%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LNRSQ A+ A+ L+ GP GTGKT T ++ Q VK+ G+ VL A SN+AVD
Sbjct: 147 LNRSQRKAISKALGSEDFFLVHGPFGTGKTRTLVELIRQEVKR-GNKVLATAESNVAVDN 205
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE--- 620
L E++ R+G+K+VR+ SR + + L I E+ EL++L + + E
Sbjct: 206 LVERLSRSGIKIVRIGHPSR--VSKHLHETTLAYLITQHELYGELRELRVIGQSLAEKRD 263
Query: 621 ------------------LSSADEKR-----------------------------YRMLK 633
+ A+ KR R L+
Sbjct: 264 TYTKPTPKFRRGLSDEEIIKLAERKRGARGLSARLIMEMAEWIKLNRQVQKAFDDARKLE 323
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ + ++ ADV+ T A + + +IDE+ Q+T P ++P + ++ +L
Sbjct: 324 ERIARDIIREADVVLTTNSSAALEVVDYDTYDVAIIDEATQSTIPSILIP-LNKVERFVL 382
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE---VQYRMHPELSKFPSNFF 750
GDH QL P ++ +A LS++LFE L+ P++ E VQYRM+ + +FPS F
Sbjct: 383 AGDHKQLPPTILSLEAQE--LSRTLFEGLIER--YPWKSEMLVVQYRMNERIMEFPSKEF 438
Query: 751 YEGSLQNGVCADE-------RKLSKIDFP---WPV---PDKPMLFYVTQGQE---EIAGS 794
Y G + ADE R L + P W P+ ++F T E E
Sbjct: 439 YGGK----IIADESVRGITLRDLVEYQSPNDSWGKILNPENVIVFIDTSKAENKWERQRR 494
Query: 795 GT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
G+ S N EA V KI + + G+KPE IGVITPY+ QR + K+ +
Sbjct: 495 GSESRENPLEAEIVAKIVDKLLSIGVKPEWIGVITPYDDQRDLI----------SMKVPE 544
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
++EV +VD +QGREK++II+S VRSN IGFL D RRLNV+LTRAK +IV+G+ L
Sbjct: 545 DVEVKTVDGYQGREKEVIILSLVRSNKLGEIGFLKDLRRLNVSLTRAKRKLIVVGDSSTL 604
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLN 938
S + ++ F+KE+ +E P +
Sbjct: 605 SSHETYKKMIEFFKEKGCFIEFPFS 629
>gi|358393396|gb|EHK42797.1| hypothetical protein TRIATDRAFT_86336 [Trichoderma atroviride IMI
206040]
Length = 2056
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 256/554 (46%), Gaps = 114/554 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQ---------TGSPV--- 551
LN+ Q AV A + +LIQGPPGTGKT T +V L+ + TG P+
Sbjct: 1332 LNQGQALAVLGAQENDGFTLIQGPPGTGKTKTIVAMVGALLSEQLAQIPAAATGVPLGVP 1391
Query: 552 -----------------LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKS--------REAI 586
LVCAPSN AVD+L ++ ++G+K A++ EAI
Sbjct: 1392 MRPNGAPGGNQARPKKLLVCAPSNAAVDELVLRL-KSGIKTTSGKARNINVLRLGRSEAI 1450
Query: 587 DSPVSFLALHNQIRNM------------------EMNSELK-KLLQLKEETGELSSADE- 626
++ V + L ++ E +E+K +L QL+ E + D+
Sbjct: 1451 NAAVKDVTLDELVKKRLEGDTTKDKAKADRDKLHEEAAEVKEQLAQLRPRLEESRNNDDR 1510
Query: 627 -------------KRYRM----------------------LKKNAEKSLLDNADVICCTC 651
KR +M ++ ++ +L++A V+C T
Sbjct: 1511 ALHNSLSRQFDDLKRKQMQIGKQIDANKDSGNSIAREMELRRRQIQQEILNSAHVLCATL 1570
Query: 652 VGAGDP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
G+G R L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + A
Sbjct: 1571 SGSGHEMFRNLDVEFETVIIDEAAQCVELSALIPLKYGCCKCILVGDPKQLPPTVLSQSA 1630
Query: 710 ARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
AR G QSLF R+ + L ++QYRMHPE+S FPS FYE L +G + L
Sbjct: 1631 ARFGYDQSLFVRMQQNHPKSVHLLDMQYRMHPEISHFPSREFYESQLHDG----QDMLQL 1686
Query: 769 IDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK---PEQ 823
PW P F+ +G +E G S VN E ++ RF R +
Sbjct: 1687 RQAPWHKDTLFAPYRFFDVEGVQERGRKGQSLVNTRELEVALQLYERFSREYRDIDLTRK 1746
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
IG+ITPY+ Q L ++Q I IE + DAFQGRE ++II SCVR++ G
Sbjct: 1747 IGIITPYKAQLYEL--RSRFQARYGENITDIIEFNTTDAFQGRECEIIIFSCVRASSTGG 1804
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
IGF+ D RR+NV LTRAK + ++G+ + L + W L+ +E+ +G +
Sbjct: 1805 IGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIVDAQERDRYTKGDI------ 1858
Query: 944 LILFSKPKQYFKKN 957
L +F +P + K N
Sbjct: 1859 LSMFRRPLERAKPN 1872
>gi|340975658|gb|EGS22773.1| 5'-3' RNA helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1993
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 254/544 (46%), Gaps = 113/544 (20%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVT---------------SATIVYQLVKQTG 548
LN Q A+ +A + +LIQGPPGTGKT T S T Q+ +
Sbjct: 1318 LNPGQARAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKSSNTGAVQISRPGA 1377
Query: 549 SP---------VLVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVS 591
P +LVCAPSN AVD+L ++ + G+K + V R + I++ V
Sbjct: 1378 GPTNGTAPSKKLLVCAPSNAAVDELVLRL-KAGVKTMNGTFHKIEVLRLGRSDVINAAVK 1436
Query: 592 FLALHNQIRNMEMNSELKK------LLQLKEETGELSSA--------------------- 624
+ L +++ M++EL K QL +E GE+ +
Sbjct: 1437 DVTL-DELVKARMDAELSKNSSPSERDQLHKEAGEIKAKLAEIRPQLDAARLSDDRASAM 1495
Query: 625 ------DEKRYR-----------------------MLKKNAEKSLLDNADVICCTCVGAG 655
DE + R + ++ ++ +LD A V+C T G+G
Sbjct: 1496 KLQREFDELKRRQAHIGAKIDADKASGNTYARETEIKRRQIQQEILDKAQVLCATLSGSG 1555
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AA+ G
Sbjct: 1556 HEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCNKCILVGDPKQLPPTVLSQSAAKYG 1615
Query: 714 LSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ + L ++QYRMHPE+S+FPS FYEG LQ+G +L P
Sbjct: 1616 YDQSLFVRMQKNHPKDVHLLDMQYRMHPEISRFPSKEFYEGLLQDGADMARLRLQ----P 1671
Query: 773 W--PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK----PEQIGV 826
W V P F+ +G +E S VN E ++ RF R + +IG+
Sbjct: 1672 WHQSVLLGPYRFFDVKGSQERGPKNQSLVNEEEVKVAMQLYMRF-RSDYRDIDLTGKIGI 1730
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPY+ Q L Q ++ I ++IE + DAFQGRE ++II SCVR++ GIGF
Sbjct: 1731 ITPYKAQLQRLRQ--KFVERYGESITEQIEFNTTDAFQGRECEIIIFSCVRASPTGGIGF 1788
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
+ D RR+NV LTRA+ + ++G+ + L + W L+ K++ G + + L
Sbjct: 1789 MTDIRRMNVGLTRARSSLWILGDSRALVQGEFWAKLIEDAKQRDRYTNGNI------MAL 1842
Query: 947 FSKP 950
S+P
Sbjct: 1843 LSQP 1846
>gi|240102675|ref|YP_002958984.1| UvrD type DNA helicase [Thermococcus gammatolerans EJ3]
gi|239910229|gb|ACS33120.1| DNA helicase, putative [Thermococcus gammatolerans EJ3]
Length = 660
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 253/495 (51%), Gaps = 82/495 (16%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A+ A+ P LI GP GTGKT T ++ Q V + G VL A SN+AVD
Sbjct: 175 LNASQRRAIARALGSPDFFLIHGPFGTGKTRTLVELIRQEVAR-GHRVLATAESNVAVDN 233
Query: 564 LTEKIHRTGLKVVRVCAKSR--EAI-DSPVSFLA----LHNQIRNMEMNSEL-------- 608
+ E++ +GLKVVRV SR +A+ ++ +++L L+ ++R + + E
Sbjct: 234 IVERLVDSGLKVVRVGHPSRVSKALHETTLAYLMTQHELYGELRELRVIGENLKEKRDTF 293
Query: 609 -------------KKLLQLKE--------------ETGELSSADEK------RYRMLKKN 635
K++L+L E E + +E+ R L++
Sbjct: 294 TKPAPKYRRGLTDKQILRLAERGIGTRGVPARLIREMAQWLKINEQVQKTFDDARKLEER 353
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
+ ++ A+V+ T AG + + +IDE+ QAT P ++P I A++ +L G
Sbjct: 354 IAREIIREANVVLTTNSSAGLEVVDYGSYDVAIIDEATQATIPSVLIP-INRARRFVLAG 412
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYE 752
DH QL P ++ ++A LS++LFE L+ P++ L VQYRM+ L +FPS FY
Sbjct: 413 DHKQLPPTILSERAKE--LSKTLFEGLIER--YPWKSEMLTVQYRMNERLMEFPSREFYN 468
Query: 753 G------SLQNGVCAD-ERKLSKIDFPWPVPDKP--MLFYVTQGQEEIAGSGTSY----- 798
G S++N AD +L K D W KP +L +V + E Y
Sbjct: 469 GRIKADESVRNITLADLGVELPKGDDVWAEVLKPENVLVFVDTAKREDRFERQRYGSESR 528
Query: 799 VNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVA 858
N EA VE+ ++ G+KPE +GVITPY+ QR + LP +EIEV
Sbjct: 529 ENPLEARLVEEAVEGLLKLGIKPEWVGVITPYDDQRDLI------SSLLP----EEIEVK 578
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
+VD +QGREK++I++S VRSN +GFL D RRLNV+LTRAK +I+IG+ LS P
Sbjct: 579 TVDGYQGREKEVIVLSFVRSNRKGELGFLKDLRRLNVSLTRAKRKLILIGDSSTLSSHPT 638
Query: 919 WNNLLNFYKEQKVLV 933
+ L+ F ++++ V
Sbjct: 639 YKRLVEFVRKRETYV 653
>gi|159475128|ref|XP_001695675.1| predicted protein [Chlamydomonas reinhardtii]
gi|158275686|gb|EDP01462.1| predicted protein [Chlamydomonas reinhardtii]
Length = 624
Score = 206 bits (524), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 222/446 (49%), Gaps = 70/446 (15%)
Query: 550 PVLVCAPSNIAVDQLTEKIHRTGLKVVRV--CAKSREAIDSPVSFLALHNQIRNMEMNSE 607
P+L A +N AVD + + G++ VR+ AK+RE++ +L Q +
Sbjct: 12 PLLAVADTNAAVDNIVGGLVARGVRCVRLGPAAKARESL----RHFSLEAQAEATPAGRK 67
Query: 608 LKKLLQLKEETGE-LSSADEKRYRMLKKNAEKSL-------LDNADVICCTCVGAGDPRL 659
L E L ADE R R L+K AE +L + A+V+ CTC AGD L
Sbjct: 68 AAALRAAAVAKQEQLREADEAR-RDLEK-AEGALREAAAAVVAGAEVVVCTCTSAGDSLL 125
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
+ +++DE+ QATEP +V + GA +++ GD QL P V+ +A AGL +LF
Sbjct: 126 EGRPWRCVVVDEASQATEPSVLVALTRGAAFVVMAGDPRQLPPTVLSDQALEAGLGVTLF 185
Query: 720 ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
ER+ G+ P L+ QYRMHP +S FPS +FY G L++GV A ++ + + F WP P P
Sbjct: 186 ERVASGGVAPLLLDTQYRMHPLISAFPSAYFYGGKLRDGVAAADKPVPR-GFAWPKPGVP 244
Query: 780 M-LFYVTQGQEEIAG---------------------------------------SG---- 795
+ L V GQEE +G SG
Sbjct: 245 LALVEVRGGQEETSGDVSEAAATAAAAAATSASVLQPKGPAAAAAAAAKAQAAASGPPKS 304
Query: 796 ---TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP---A 849
+SY N EA +T + + G ++TPY GQ LV+ + Q L A
Sbjct: 305 GDRSSYRNPAEALAALAVTQKLL-AGGDISSAAILTPYRGQ-VRLVEALLRQRGLDAAWA 362
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+E+ V++VD +QGRE D+++ S VR+N+ +GFL+DPRR+NVA+TR + G++V+ +
Sbjct: 363 AAGREVAVSTVDGYQGREADVVVFSAVRANERGAVGFLSDPRRMNVAITRPRRGLVVLAD 422
Query: 910 PKVLSKQPL-WNNLLNFYKEQKVLVE 934
LS+ W + + ++Q ++ +
Sbjct: 423 GPTLSRGSRDWATYIKWARQQGIVTD 448
>gi|194218569|ref|XP_001917022.1| PREDICTED: DNA-binding protein SMUBP-2 [Equus caballus]
Length = 1004
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 247/488 (50%), Gaps = 54/488 (11%)
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAI-QRPLSLIQGPPG 529
YH ++ EVLF P S L+ SQ AVK A+ Q+ L++I GPPG
Sbjct: 178 YHSGPASSLIEVLFGASAPSPASEIGPLTFCNASLDASQKEAVKFALSQKELAVIHGPPG 237
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--EAID 587
TGKT T ++ Q+VKQ G VL CAPSNIAVD L E++ + +++R+ +R E+I
Sbjct: 238 TGKTTTVVEVILQVVKQ-GLKVLCCAPSNIAVDNLVERLAQCKQRILRLGHPARLLESIQ 296
Query: 588 SPVSFLALHNQIRNMEMNSELKK----------LLQLKEETGELSSADEKRYRMLKKNAE 637
S A+ + N ++ ++++K +Q K+E S + + LK+ E
Sbjct: 297 QH-SLDAVLARSDNAQIVADIRKDIDQVFVKNKKIQEKQEKSNFRSEIKLLRKELKEREE 355
Query: 638 KSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEPECMVPVILGAKQ 690
++L++ ADV+ T GA LK+ F ++IDE QA E C +P +L A++
Sbjct: 356 AAMLESLTSADVVLATNTGASPDGPLKLLPDGYFDVVVIDECAQALEASCWIP-LLKARK 414
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERL-VVLGIRPFR-LEVQYRMHPELSKFPSN 748
+L GDH QL P ++ KAA AGLS SL ERL G R R L VQYRMH + ++ S
Sbjct: 415 CVLAGDHKQLPPTIVSHKAALAGLSLSLMERLDQEYGARVVRTLTVQYRMHQAIMQWASE 474
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQG-------QEEIAGSGTS 797
Y G L L D P + P+L T G +E+ G
Sbjct: 475 ALYAGQLTAHPSVAGHLLR--DLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNP 532
Query: 798 YVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
R A +V+ + + G+ I VITPY Q L Q + ++ + E+E+
Sbjct: 533 GEVRLVALHVQAL----VDAGVCASDIAVITPYNLQVDLLRQSLAHR-------HPELEI 581
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
SVD FQGREK+ +I+S VRSN +GFL + RR+NVA+TRA+ + V+ + + ++
Sbjct: 582 KSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVNNHA 641
Query: 918 LWNNLLNF 925
LL++
Sbjct: 642 FLKTLLDY 649
>gi|254568798|ref|XP_002491509.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
gi|238031306|emb|CAY69229.1| Presumed helicase required for RNA polymerase II transcription
termination and processing of RNAs [Komagataella pastoris
GS115]
Length = 2146
Score = 206 bits (523), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 257/534 (48%), Gaps = 119/534 (22%)
Query: 505 LNRSQVYAVKHA-IQRPLSLIQGPPGTGKTVTSATIVYQLVKQ---------------TG 548
+N+SQ A+ A SLIQGPPGTGKT T IV +++ T
Sbjct: 1276 VNKSQAQAIAGASTSSGFSLIQGPPGTGKTKTILGIVGKVLTTRNNLHSTPISIPGAVTS 1335
Query: 549 SP---------VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSP 589
P VLVCAPSN AVD+L ++ R G+ KVVR+ +AI+S
Sbjct: 1336 GPRKPETGVRKVLVCAPSNAAVDELVIRL-REGVPGISGQMFKPKVVRLGRS--DAINSA 1392
Query: 590 VSFLAL------------------------HNQI---RNMEMNSELKKLLQLKEET---- 618
V L L HN++ RN + LK++ LK E
Sbjct: 1393 VKDLTLEELVDAELNETARAPKADQSIREKHNKVLAERN-SIREALKEVSNLKPEEVKDL 1451
Query: 619 ----GELSSA--------DEKR------YR---MLKKNAEKSLLDNADVICCTCVGAGDP 657
E++ A DE+R YR + ++ + +L A +IC T G+
Sbjct: 1452 QKRYSEITKAKNELGKKLDEQREEVSVSYRNREIQRRAVQFRILSQAQIICSTLSGSAHD 1511
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L + F +++IDE+ Q E ++P+ G K+ I+VGD QL P V+ + AA
Sbjct: 1512 FLATMDTSFDTVVIDEACQCIELSAIIPLRYGCKRCIMVGDPNQLPPTVLSQAAAEYKYE 1571
Query: 716 QSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ + + P + L VQYRMHP++S FPS FY G L +G E +K
Sbjct: 1572 QSLFVRM--MNVHPKSVYLLNVQYRMHPQISVFPSKEFYNGKLIDG----EGTETKNTRS 1625
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVITP 829
W P F G+E S S NR EA V + + R +IGVI+P
Sbjct: 1626 WHKKIPPYCFIDVTGKESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKIGVISP 1685
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEI--EVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
Y+ Q+ L++ M + K + I +V +VD FQG+EKD+I+ SCVR+++ +G+GFL
Sbjct: 1686 YK-QQVVLLRDMILR-----KFGRNIGIDVNTVDGFQGQEKDVILFSCVRADETKGVGFL 1739
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL------NFYKEQKVLVEG 935
D RRLNVALTRAK ++++G+ LS LW +L+ N + Q+ L++G
Sbjct: 1740 ADVRRLNVALTRAKSTLLIVGHASNLSGHSLWRHLVQDSKDRNVFFTQRSLLDG 1793
>gi|389641863|ref|XP_003718564.1| DNA helicase [Magnaporthe oryzae 70-15]
gi|351641117|gb|EHA48980.1| DNA helicase [Magnaporthe oryzae 70-15]
Length = 713
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 237/485 (48%), Gaps = 85/485 (17%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ + ++LI GPPGTGKT T ++ Q++KQ G +LVC PSNI+V
Sbjct: 213 PTLNDSQKDAIRFALASKEIALIHGPPGTGKTHTLIELILQMLKQ-GLRILVCGPSNISV 271
Query: 562 DQLTEKIHRTGLKVVR----------VCAKSREAIDSPVSFLALHNQIRNMEMNSE---L 608
D + E++ + +VR V S + + A+ +R EM+++ +
Sbjct: 272 DNIVERLAPHKVPIVRLGHPARLLPSVVGHSLDVLTQTSEAGAIVRDVR-AEMDAKQASI 330
Query: 609 KKLLQLKEET---GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
KK +E GEL K +R +K +LL ++ V+ T G+G +L + KF
Sbjct: 331 KKTKSGRERKAIYGELHEL-RKEFRDREKRCVANLLQSSKVVLATLHGSGGFQLRQEKFD 389
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV--MCKKAARAG---------- 713
++IDE+ QA E +C V +L AK+ +L GDH QL P + + KAA+
Sbjct: 390 VVIIDEASQALEAQCWV-ALLSAKKAVLAGDHLQLPPTIKSLNSKAAKTATGGDGSGTAD 448
Query: 714 ----------------LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSL 755
L +LF+RL+ L + L QYRMH ++ +FPS+ Y G L
Sbjct: 449 GEESSAGQSRKKKGVTLETTLFDRLLDLHGPAIKRMLTTQYRMHEKIMRFPSDELYGGRL 508
Query: 756 QNGVCADERKLSKIDFPWPVPD-----KPMLFYVTQGQE--------------------E 790
ER L D P+ V D +P++F TQG +
Sbjct: 509 VAAEAVKERLLK--DLPYKVEDTDDTSEPLIFIDTQGGDFPERNDEMDNGDADDKKKTKR 566
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
+ G S N EA+ V + + G+KPE I ITPY Q A L ++ +
Sbjct: 567 MLLHGESKSNEMEAALVAQHVRSLVDAGVKPEDIACITPYNAQLAVLAPLLKDR------ 620
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
+ IE+ SVD FQGREK+ +++S RSN +GFL + RRLNVA+TR K + VIG+
Sbjct: 621 -FPGIELGSVDGFQGREKEAVVVSLCRSNPDGEVGFLGERRRLNVAMTRPKRSLTVIGDS 679
Query: 911 KVLSK 915
+ + +
Sbjct: 680 ETVKR 684
>gi|308198102|ref|XP_001386840.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149388861|gb|EAZ62817.2| DEAD-box type RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 1999
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 254/520 (48%), Gaps = 110/520 (21%)
Query: 501 NLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP-------- 550
N+ D+N+SQ A+ + SLIQGPPGTGKT T IV Y L +Q
Sbjct: 1278 NIYDVNKSQAKAIIGSYNSEGFSLIQGPPGTGKTKTILGIVGYSLSQQVDEKIIIKIDQG 1337
Query: 551 -------------VLVCAPSNIAVDQLTEKIHRTGLKVVR--------VCAKSREAIDSP 589
VL+CAPSN AVD+L ++ R G++ R V +AI++
Sbjct: 1338 NGNVISGNEKKPKVLICAPSNAAVDELVVRL-RDGVRNSRGEHIIPKLVRMGRSDAINAA 1396
Query: 590 VSFLALH----NQIRNMEMNSE--------------------LKKLLQL----KEETGEL 621
V L L +++ MN++ L++ LQ +E EL
Sbjct: 1397 VKDLTLEELVEKELQAKAMNTDTSTDPNIRAEHSKCIEERDNLRRKLQTDSLSSKEIDEL 1456
Query: 622 SSA----DEKR-----------------YR---MLKKNAEKSLLDNADVICCTCVGAGDP 657
SA ++KR YR + ++NA+ +L++A +IC T G+
Sbjct: 1457 ESALREINKKRTELGKQLDLQRERVSIAYRTREIERRNAQAKILNDAQIICSTLSGSAHD 1516
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L + I F ++IDE+ Q E ++P+ G K+ I+VGD QL P V+ + AA
Sbjct: 1517 FLANMGITFDQVVIDEACQCVELSSIIPLRYGCKKCIMVGDPNQLPPTVLSQAAASFNYE 1576
Query: 716 QSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW- 773
QSLF R+ + L+VQYRMHP++S FPS FY+ L++G E +K + PW
Sbjct: 1577 QSLFVRMQQNNPNSVYLLDVQYRMHPQISAFPSAQFYQSRLKDG----EGMAAKNERPWH 1632
Query: 774 -PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-----QIGVI 827
P P F+ + + S N EA ++ + + + PE +IG+I
Sbjct: 1633 SQYPLSPYRFFDIVSRHQRNELSRSLFNTGEARVALELVEKLM--TLLPEDQFSGRIGII 1690
Query: 828 TPYEGQ----RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG 883
+PY+ Q R ++ Y I +I+ +VD FQG+EK++IIMSCVR++D+
Sbjct: 1691 SPYKEQIKTLRDVFIKKYGYS------ITTQIDFNTVDGFQGQEKEIIIMSCVRASDNGN 1744
Query: 884 IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
+GFL+D RR+NVALTRA+ + ++GN + L + +WN LL
Sbjct: 1745 VGFLSDVRRMNVALTRARTTLWILGNKESLMRNKIWNKLL 1784
>gi|452003720|gb|EMD96177.1| hypothetical protein COCHEDRAFT_1201038 [Cochliobolus heterostrophus
C5]
Length = 1973
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 174/551 (31%), Positives = 260/551 (47%), Gaps = 109/551 (19%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQL----VKQTGSPV------- 551
++N +Q A+K AI +LIQGPPG+GKT T IV + ++ G+ +
Sbjct: 1269 NVNTAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDSLRNRGTAISVPGQQR 1328
Query: 552 --------LVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVSFLAL 595
LVCAPSN AVD+L + + G+K V + R +AI + V + L
Sbjct: 1329 SEAASKKLLVCAPSNAAVDELVMRF-KDGIKTLNGESRKVNIVRLGRGDAIKASVQDVTL 1387
Query: 596 HNQIR----------------------NMEMNSELKKLLQLK---EETGELSSADEKRYR 630
+ + +++ +LK+ Q + E G+ ++ E+
Sbjct: 1388 EELVNQRLGVDPSDGKDKEATQKLFQDHKKISDQLKQAYQQRDSGEVKGKAAAKLEEDIN 1447
Query: 631 MLK-------------KNAEKSLLDNAD---------------VICCTCVGAGDPRL--L 660
L+ K+ EK NAD VIC T G+G L
Sbjct: 1448 ALRRQKTALGTKIDNVKDDEKLASRNADLNRRRAQEAVLNEAHVICATLSGSGHEMFQGL 1507
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
I+F ++++DE+ Q E ++P+ G + ILVGD QL P V K+AAR QSLF
Sbjct: 1508 SIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAARFQYEQSLFV 1567
Query: 721 RL-------VVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
R+ V L L+ QYRMHPE+S FPS FY+G L +G D L K +
Sbjct: 1568 RMQKNHPDDVHL------LDTQYRMHPEISLFPSQTFYDGRLLDG--GDMAGLRKQPWHQ 1619
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGMKPEQIGVITP 829
+ P F+ +GQ+ A G S +N E +++T+ + K ++G+ITP
Sbjct: 1620 SMVLGPYRFFDVKGQQAAAPKGHSLINVAEIKVAMQLYKRLTSDYPDYDFK-GKVGIITP 1678
Query: 830 YEGQRAFLVQH-MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Y+ Q L Q MQ G I ++I+ + DAFQGRE ++II SCVR++ GIGFL
Sbjct: 1679 YKSQLRELKQSFMQVYGQ---SIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQ 1735
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN-LKESLILF 947
D RR+NV LTRAK + V+GN + L + WN L+ KE+ +G + L + F
Sbjct: 1736 DIRRMNVGLTRAKSSLWVLGNSESLQRGQYWNKLIVNAKERNRFTDGDVPKMLNQHSSKF 1795
Query: 948 SKPKQYFKKNN 958
PK+ + + N
Sbjct: 1796 PAPKEGYVQPN 1806
>gi|390945185|ref|YP_006408946.1| type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
gi|390418613|gb|AFL86191.1| Type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
Length = 643
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 265/529 (50%), Gaps = 71/529 (13%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
VD ++ S+ M+ ++ D+ + LLG + + + +L +
Sbjct: 130 VDLLFDEASYREMESTMKAVIKADKGRLGELKSILLGETLPSFSQKVY-------HDLQE 182
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN +Q A++ Q +++I GPPGTGKT T + ++K T VLVCAPSN AVD
Sbjct: 183 LNPAQNQALRLINQSDDVAIIHGPPGTGKTTTLIAAIQNILK-TNRQVLVCAPSNAAVDL 241
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L EK+ G+ +R+ +R +D + L +I + E +LKKL + +E +L
Sbjct: 242 LVEKLVDKGVPTLRIGHPAR--VDDKILAQTLDAKIASHESYKDLKKLRKSVDEYRKLGR 299
Query: 624 ADEKRYRMLKKNAEKSLLDNA----------------------DVICCTCVGAGDPRLLK 661
++ + ++ K LLD A V T VG+ + L
Sbjct: 300 KYKRNFGHEERVQRKRLLDEAGRMKEDADILENYIMYDVFQMTQVFASTLVGSSNQALKG 359
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
I F + IDE+ Q E +P I+ A+++++ GDH QL P + +AA+AGLS++LFE+
Sbjct: 360 IDFPYVFIDEAGQGLEAATWIP-IMKAEKVVMTGDHLQLPPTIKSYEAAKAGLSETLFEK 418
Query: 722 LVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
++ + L VQYRM ++ F S FY+ +L+ V L++ ++ +
Sbjct: 419 VIKRQPEASKMLTVQYRMPEKIMGFSSKLFYKNNLEAAVNTHIHFLTE--------EESV 470
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEAS---NVE--KITTRFI-----RCGM---KPE--QIG 825
L ++ + AGSG S E+ N E K T +++ R G+ K E IG
Sbjct: 471 LEFI-----DTAGSGFSEHQEKESLSTLNAEEAKFTLKYLENLLKRVGIGKIKTEGWNIG 525
Query: 826 VITPYEGQ-RAF---LVQHMQYQGSLPAKIYQEI-EVASVDAFQGREKDLIIMSCVRSND 880
+I+PY Q R F + + +Y + + E+ + S+D FQG+E+D+I +S VRSN
Sbjct: 526 LISPYRAQVRKFQELIFESYEYPN---LRSFSELLTIDSIDGFQGQERDIIFISLVRSNA 582
Query: 881 HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+ IGFL+D RR+NVALTRAK ++VIG+ LS +N LN+ +E+
Sbjct: 583 NGEIGFLSDTRRMNVALTRAKRKLVVIGDSSTLSSNDFYNAFLNYVEEK 631
>gi|85090568|ref|XP_958479.1| hypothetical protein NCU07395 [Neurospora crassa OR74A]
gi|28919845|gb|EAA29243.1| hypothetical protein NCU07395 [Neurospora crassa OR74A]
Length = 716
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 239/473 (50%), Gaps = 80/473 (16%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ QL+++ +LVC PSNI+V
Sbjct: 234 PTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLRRDLR-ILVCGPSNISV 292
Query: 562 DQLTEKIHRTGLKVVR----------VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL 611
D + E++ L ++R V + S + + + A+ +R EM+++ +
Sbjct: 293 DNIVERLSPHKLPILRLGHPARLLPSVLSHSLDILTTTSDAGAIVKDVR-AEMDAKQASI 351
Query: 612 LQLKEETGELSSADEKR--YRMLKKNAE----------KSLLDNADVICCTCVGAGDPRL 659
+ + + E+R Y LK+ + L+ + V+ T GAG +L
Sbjct: 352 RKTR-------NGRERRAIYAELKELRKEYRERERRCVSDLVGRSKVVLATLHGAGGYQL 404
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV-------MCKKAARA 712
+F ++IDE+ QA E +C VP +L AK+ +L GDH QL P + K +
Sbjct: 405 KNEEFDVVIIDEASQALEAQCWVP-LLWAKKAVLAGDHLQLPPTIKSLNSRAATTKEKKE 463
Query: 713 G--LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
G L +LF+RL+ L + L QYRMH ++ +FPS+ YE L ER L
Sbjct: 464 GQTLETTLFDRLLTLHGPSIKRMLTTQYRMHEKIMRFPSDELYESKLVAAEHVRERLLK- 522
Query: 769 IDFPWPVPD------KPMLFYVTQG-------QEEIAGSGT-------------SYVNRT 802
D P+ + +P++F TQG +EE+ G+G+ S N
Sbjct: 523 -DLPYEGVEANDDTTEPLIFIDTQGGDFPEKNEEELDGNGSTDKKKVIRSLHGESKSNEM 581
Query: 803 EASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDA 862
EA+ V + I+ G++P+ I V+TPY Q + L + P IE+ SVD
Sbjct: 582 EAALVRQHVRGLIKAGVRPDDIAVVTPYNAQLSILAP---LKDEFPG-----IELGSVDG 633
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
FQGREK+ +I+S VRSND +GFL + RRLNVA+TR K + VIG+ + + K
Sbjct: 634 FQGREKEAVIVSLVRSNDEGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKK 686
>gi|167384737|ref|XP_001737082.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900358|gb|EDR26702.1| hypothetical protein EDI_272190 [Entamoeba dispar SAW760]
Length = 1001
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 171/296 (57%), Gaps = 12/296 (4%)
Query: 640 LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
+L + +C T LLK KF + ++DE+ Q+ EPE + +I ++ +L+GD Q
Sbjct: 607 ILKGIECVCSTLTTCTRSTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQQ 665
Query: 700 LGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
L P + +A AG +S+FER + I+ L+ QYRMHP + +F + FY L+NG
Sbjct: 666 LQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAIVEFSNKMFYSSKLENG 725
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V ++R S+I +P P++F G+EE SGTSY N E ++ I ++
Sbjct: 726 VSNEDRFDSRIINFFPDYTNPIMFINCDGREECGSSGTSYNNEGEVLIIKHIVGGLLKNK 785
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+K +IG+I+PY+ Q+ + Q + +I+VA++D FQG EK+ II SCVRS
Sbjct: 786 VKENEIGIISPYQAQQELISQCVS----------TKIKVANIDGFQGNEKEYIIFSCVRS 835
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
N GIGF++D +RLNVALTRAK G+IVIGN + L +W+ L++ + + L E
Sbjct: 836 NQTLGIGFVSDYKRLNVALTRAKCGLIVIGNIQTLIGSKVWSMLVHHFYLRDALFE 891
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 20/144 (13%)
Query: 485 DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV 544
D + + L ++ PNL +LN Q+ A+ +A+ +SL+ GPPGTGKT + +I L+
Sbjct: 345 DTITYDEILTDKYNIPNLSNLNDYQIKAIYNALNEDISLVIGPPGTGKTTVAVSIAQYLI 404
Query: 545 ---------KQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLAL 595
+ +LVCA SN AVD + K+ G+ +R+ A + F
Sbjct: 405 YNKHRFYNRNRAERRLLVCASSNNAVDVICSKLIEKGIPTIRIVADEQ--------FENC 456
Query: 596 HNQIRNMEMNSELKKLLQLKEETG 619
++IR +S LKK ++ E+ G
Sbjct: 457 SDKIRE---HSLLKKAIEFTEKRG 477
>gi|328351981|emb|CCA38380.1| hypothetical protein PP7435_Chr2-0694 [Komagataella pastoris CBS
7435]
Length = 2154
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 257/534 (48%), Gaps = 119/534 (22%)
Query: 505 LNRSQVYAVKHA-IQRPLSLIQGPPGTGKTVTSATIVYQLVKQ---------------TG 548
+N+SQ A+ A SLIQGPPGTGKT T IV +++ T
Sbjct: 1276 VNKSQAQAIAGASTSSGFSLIQGPPGTGKTKTILGIVGKVLTTRNNLHSTPISIPGAVTS 1335
Query: 549 SP---------VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSP 589
P VLVCAPSN AVD+L ++ R G+ KVVR+ +AI+S
Sbjct: 1336 GPRKPETGVRKVLVCAPSNAAVDELVIRL-REGVPGISGQMFKPKVVRLGRS--DAINSA 1392
Query: 590 VSFLAL------------------------HNQI---RNMEMNSELKKLLQLKEET---- 618
V L L HN++ RN + LK++ LK E
Sbjct: 1393 VKDLTLEELVDAELNETARAPKADQSIREKHNKVLAERN-SIREALKEVSNLKPEEVKDL 1451
Query: 619 ----GELSSA--------DEKR------YR---MLKKNAEKSLLDNADVICCTCVGAGDP 657
E++ A DE+R YR + ++ + +L A +IC T G+
Sbjct: 1452 QKRYSEITKAKNELGKKLDEQREEVSVSYRNREIQRRAVQFRILSQAQIICSTLSGSAHD 1511
Query: 658 RL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
L + F +++IDE+ Q E ++P+ G K+ I+VGD QL P V+ + AA
Sbjct: 1512 FLATMDTSFDTVVIDEACQCIELSAIIPLRYGCKRCIMVGDPNQLPPTVLSQAAAEYKYE 1571
Query: 716 QSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ + + P + L VQYRMHP++S FPS FY G L +G E +K
Sbjct: 1572 QSLFVRM--MNVHPKSVYLLNVQYRMHPQISVFPSKEFYNGKLIDG----EGTETKNTRS 1625
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVITP 829
W P F G+E S S NR EA V + + R +IGVI+P
Sbjct: 1626 WHKKIPPYCFIDVTGKESTNTSNKSLFNRAEAQAVVSLIDALLGLDRDFNFASKIGVISP 1685
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEI--EVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
Y+ Q+ L++ M + K + I +V +VD FQG+EKD+I+ SCVR+++ +G+GFL
Sbjct: 1686 YK-QQVVLLRDMILR-----KFGRNIGIDVNTVDGFQGQEKDVILFSCVRADETKGVGFL 1739
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL------NFYKEQKVLVEG 935
D RRLNVALTRAK ++++G+ LS LW +L+ N + Q+ L++G
Sbjct: 1740 ADVRRLNVALTRAKSTLLIVGHASNLSGHSLWRHLVQDSKDRNVFFTQRSLLDG 1793
>gi|403216944|emb|CCK71439.1| hypothetical protein KNAG_0H00230 [Kazachstania naganishii CBS
8797]
Length = 685
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 259/519 (49%), Gaps = 70/519 (13%)
Query: 447 FIWKST---SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP----KHFSA 499
++ K+T ++ RM+ +RK A +++ S I LL F + P K+F+
Sbjct: 158 YVTKTTNTITYKRMESTMRKLAEFEETPSNRIVQLLLNMTT----FIPNKPLTGIKYFN- 212
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
LN+SQ A+ +++ LS+I GPPGTGKT T ++ QLV VLVC PSNI
Sbjct: 213 ---DQLNKSQQDAIAFSMENELSIIHGPPGTGKTYTLVELILQLVLNKNQRVLVCGPSNI 269
Query: 560 AVDQLTEKI--HRTGLKVVRVCAKSREAIDSPVSFL----------ALHNQI-----RNM 602
+VD + E++ H G ++R+ +R + + L AL N I + +
Sbjct: 270 SVDTILERLSAHLPGNLLLRIGHPARLLKSNLLHSLDILTKRGDNGALLNDIYKDIDKTI 329
Query: 603 EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI 662
+LK +E E+ + K R +++ L+ A V+ T GA LLK
Sbjct: 330 AGVRKLKSYKDRREAWNEVKTL-RKELRARERSIVTDLILEAKVVVATLHGASSKELLKA 388
Query: 663 K------FHSILIDESMQATEPECMVPVILGAK----QLILVGDHCQLGPVVMCKKAAR- 711
F +++IDE Q+ EP+C +P+I K +L+L GD QL P V + A+
Sbjct: 389 YDEVPKLFDTVIIDEVSQSLEPQCWIPLISHYKSNISKLVLAGDDKQLPPTVKTEDNAKF 448
Query: 712 -AGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
L +LF+RLV F+ L+VQYRM+ + +FPS Y G L A + +K
Sbjct: 449 QKQLETTLFDRLVKNYGNVFKKFLDVQYRMNETIMEFPSKAMYNGKL----LAHDSVATK 504
Query: 769 IDFPWPVPDKP------MLFYVTQG----QEEIAGSGT--SYVNRTEASNVEKITTRFIR 816
+ P D +++Y TQG + E + S S N EA V+ + I
Sbjct: 505 LLLDLPGCDTAEDTEVAVIWYDTQGDFFLESEDSDSAVFASKYNENEALVVKSHILKLIG 564
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCV 876
+ PE IG+I+PY Q + + ++Y IE+++VD FQGREK++II+S V
Sbjct: 565 DHVSPECIGIISPYSAQVTLI-------KGMIREMYPSIEISTVDGFQGREKEVIILSLV 617
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
RSND +GFL + RRLNVA+TR K + V+GN ++L +
Sbjct: 618 RSNDKFEVGFLQENRRLNVAMTRPKKQLCVVGNIEMLER 656
>gi|356536591|ref|XP_003536820.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 949
Score = 205 bits (522), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 182/611 (29%), Positives = 285/611 (46%), Gaps = 77/611 (12%)
Query: 378 YFSLAKTDGDMRL-----MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDE---VGLEL 429
+ L K +G+ RL GD + +R +YD+ + + ++FGD+ + + L
Sbjct: 327 HLVLFKVEGNHRLPPTTLSPGDMVCVR-TYDSMGAIT-TSCIQGFVNSFGDDGYSITVAL 384
Query: 430 KSSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAVDDQSVSAY 474
+S G PT FS F KS DR+Q + L+K + ++ S
Sbjct: 385 ESRHGDPT-----FSKLF-GKSVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSIS 438
Query: 475 IYHRLLGHNVDEVLFRCHLPKHFSAPNL------PDLNRSQVYAVKHAI--QRPLSLIQG 526
+ L G D + ++ L + SQ A+ + +RP+ +IQG
Sbjct: 439 VVATLFGDGEDVAWLEKNHLADWAEEKLDGRLGNETFDDSQWRAIAMGLNKKRPVLVIQG 498
Query: 527 PPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--- 583
PPGTGKT ++ V+Q G VLV AP+N AVD + EK+ GL +VRV +R
Sbjct: 499 PPGTGKTGLLKQLIACAVQQ-GERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISK 557
Query: 584 --------EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKN 635
E +++ ++ + + ++ +L+ L+ + ++ R LKK
Sbjct: 558 TVGSKSLEEIVNAKLASFREEYERKKSDLRKDLRHCLRDDSLASGIRQLLKQLGRSLKKK 617
Query: 636 AEKSL---LDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVILGAKQL 691
++++ L +A V+ T GA DP + ++ F ++IDE+ QA EP C +P++ G K+
Sbjct: 618 EKQTVIEVLSSAQVVVATNTGAADPLVRRLDTFDLVVIDEAGQAIEPSCWIPILQG-KRC 676
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFPSNF 749
IL GD CQL PV++ +KA GL SL ER L GI RL QYRM+ ++ + S
Sbjct: 677 ILAGDQCQLAPVILSRKALEVGLGISLLERAATLHEGILTTRLTTQYRMNDAIASWASKE 736
Query: 750 FYEGSLQNGVCADERKLSKIDFPWP--VPDKPMLFYVTQ--------GQEE---IAGSGT 796
Y G L++ L F P + P+L T+ G EE AG+G+
Sbjct: 737 MYGGLLKSSETVFSHLLVDSPFVKPTWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGS 796
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
Y N EA V + I G+ P I V +PY Q L + P E
Sbjct: 797 LY-NEGEAEIVLQHVFSLIYAGVSPTAIAVQSPYVAQVQLLRDKLD---EFPEA--AGTE 850
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
VA++D+FQGRE D +I+S VRSN +GFL D RR+NVA+TRA+ + ++ + +
Sbjct: 851 VATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHLALVCDSSTICHN 910
Query: 917 PLWNNLLNFYK 927
LL +
Sbjct: 911 TFLARLLRHIR 921
>gi|167378864|ref|XP_001734957.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903256|gb|EDR28864.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 1040
Score = 205 bits (522), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 173/296 (58%), Gaps = 12/296 (4%)
Query: 640 LLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
+L+ + +C T LLK KF + ++DE+ Q+ EPE + +I ++ +L+GD Q
Sbjct: 659 ILNGIECVCSTLTICTRSTLLKQKFFASIVDEAAQSLEPETLAGII-NVRKAVLIGDIQQ 717
Query: 700 LGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
L P + +A AG +S+FER + I+ L+ QYRMHP +++F + FY L+NG
Sbjct: 718 LQPTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAIAEFSNKMFYSFKLENG 777
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG 818
V ++R +I +P P++F G+E+ SGTSY N E +++I ++
Sbjct: 778 VDGEDRFDDRIINFFPDYTNPIMFINCDGREQYGSSGTSYNNEGEVLIIKQIVDGLLKNK 837
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+K +IG+I+PY+ Q+ + Q + +I+VA++D FQG EK+ II SCVRS
Sbjct: 838 VKENEIGIISPYQAQQELISQC----------VSTKIKVANIDGFQGNEKEYIIFSCVRS 887
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
N GIGF+ND +RLNVALTRAK G+IVIGN + L +W+ L++ + + L E
Sbjct: 888 NQTLGIGFVNDYKRLNVALTRAKCGLIVIGNIQTLIGSKVWSMLVHHFYLRDALFE 943
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 28/171 (16%)
Query: 465 AVDDQSVSAYIYHRLLGHNV-------DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI 517
+ ++ V Y Y ++L N+ D + + L ++ PNL +LN Q+ A+ +A+
Sbjct: 362 VLQEREVDGY-YSKILCCNMFQTLKTNDTITYDEILTDKYNIPNLSNLNDYQIKAIYNAL 420
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLV---------KQTGSPVLVCAPSNIAVDQLTEKI 568
+SL+ GPPGTGKT + +I L+ + +LVCA SN AVD + K+
Sbjct: 421 NEDISLVIGPPGTGKTTVAVSIAQYLIYNKHRFYNRNRAERRLLVCASSNNAVDVICSKL 480
Query: 569 HRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
G+ +R+ A + F ++IR +S LKK ++ E+ G
Sbjct: 481 IEKGIPTIRIVADEQ--------FENCSDKIRE---HSLLKKAIEFTEKRG 520
>gi|343429606|emb|CBQ73179.1| related to SEN1 protein [Sporisorium reilianum SRZ2]
Length = 2239
Score = 205 bits (522), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 170/508 (33%), Positives = 243/508 (47%), Gaps = 110/508 (21%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSP------------------VLVCAPSNIAVD 562
SLIQGPPGTGKT T ++ V P +L+CAPSN A+D
Sbjct: 1492 FSLIQGPPGTGKTKTICALIGAFVSNRKGPSMSVQAGQAQGKLGATKKILLCAPSNAAID 1551
Query: 563 QLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFL------------------- 593
++ ++ R G+ KVVRV E I+ V +
Sbjct: 1552 EVAKRA-RAGIRLADGKTIHPKVVRVGRD--ETINVSVKDISLENLIDQRLEGGSAFDSN 1608
Query: 594 ----------ALHNQIRNMEMNSELKK--------------LLQLKEET--------GEL 621
ALH +I ++M E K+ + QL+ E G +
Sbjct: 1609 RNGGATADPSALHAEIHILKMQREQKQTELSQARANGSQAMVTQLEAEIRNLSAKRLGVM 1668
Query: 622 SSADEKRYRML---------KKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFHSILID 670
S DE + + ++ A +L +ADVIC T GAG L + F +++ID
Sbjct: 1669 SKLDEAKDKQQSQHRQREADRRRARLEILGDADVICTTLSGAGHEMLSGVAFDFETVVID 1728
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF 730
E+ QA E ++P+ G KQ I+VGD QL P V+ ++A + G SQSLF R+ +
Sbjct: 1729 EAAQAVELSTIIPLRYGCKQCIMVGDPNQLPPTVISQEAEKLGYSQSLFVRMFERSPQAV 1788
Query: 731 R-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--KPMLFYVTQG 787
L +QYRMHPE+S FPS FY+ LQ+G E L++ PW + +P F T+
Sbjct: 1789 HLLSIQYRMHPEISVFPSKAFYDSKLQDGPNMAE--LTRQ--PWHKYELMRPFKFLSTKA 1844
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE----QIGVITPYEGQRAFLVQHMQY 843
E G S +N+ EA NV +R E +IGV+T Y+ Q L + Q
Sbjct: 1845 PES-PGRMHSIINKEEA-NVALALYERLRTDNPSENFDYRIGVVTMYKAQVFELKRTFQQ 1902
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS-NDHQGIGFLNDPRRLNVALTRAKY 902
+ L I I+ +VD FQG+EKD+II+SCVRS + + IGFL+D RRLNVA+TRAK
Sbjct: 1903 RYGL--DIADRIDFNTVDGFQGQEKDIIILSCVRSAAEPRSIGFLSDRRRLNVAVTRAKS 1960
Query: 903 GIIVIGNPKVLSK-QPLWNNLLNFYKEQ 929
+ VIGN + L + P+W L+ ++Q
Sbjct: 1961 NLFVIGNAEHLRRGDPIWERLVATAEQQ 1988
>gi|440750068|ref|ZP_20929312.1| dna-binding protein smubp-2 [Mariniradius saccharolyticus AK6]
gi|436481109|gb|ELP37290.1| dna-binding protein smubp-2 [Mariniradius saccharolyticus AK6]
Length = 642
Score = 205 bits (522), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 161/525 (30%), Positives = 253/525 (48%), Gaps = 63/525 (12%)
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
T VD ++ S+ M+ A++ ++ LLG E
Sbjct: 126 TRIGVDLLFDEASYREMESAMKSVIQSEKGRLGAFKQILLGEKSPEF-------GPIEPL 178
Query: 501 NLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
+ LN SQ A+ + + +++I GPPGTGKT T + + +K S V+V APSN
Sbjct: 179 EVEGLNESQNQALGLVVATKDVAVIHGPPGTGKTTTLVASIVETLKSV-SQVMVTAPSNA 237
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
AVD L EK+ G+K +R+ +R +D + L +I E +LK++ + +E
Sbjct: 238 AVDLLVEKLVTQGIKTLRIGHPAR--VDEQILAQTLDAKIAQHESYKDLKRVKKSVDELR 295
Query: 620 ELSSADEKRYRMLKKNAEKSLLDN----------------------ADVICCTCVGAGDP 657
+L+S ++ Y ++ ++ +LD V+ CT VGA
Sbjct: 296 KLASKYKRNYGQEERMQKRRMLDEVARARDEAAQLEDYIVYDIFQETQVVACTLVGAAHS 355
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
L KF + IDE+ Q EP +PV A+++++ GDHCQL P + +AA+ GL+++
Sbjct: 356 MLDGRKFPVVFIDEAAQGLEPAVWIPV-QKAQKVVMAGDHCQLPPTIKSYEAAQGGLAET 414
Query: 718 LFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP 774
LFE+ V+ +P L VQYRM ++ F S+FFY L A + +D P
Sbjct: 415 LFEK--VIKRKPSASHMLNVQYRMPELIAGFSSDFFYRRDLH---AAPNTRYHFLDEAEP 469
Query: 775 VPDKPMLFYVTQGQ---EEIAGSGTSYVNRTEA----SNVEKITTRFIRCGMKPE--QIG 825
V + F T G E+ S N EA +E + R +K IG
Sbjct: 470 V----LEFIDTAGSGFAEQTEEETFSTFNPEEAKFCLGQLESLIKRIGIAKIKTAAWNIG 525
Query: 826 VITPYEGQ-RAF---LVQHMQYQGSLPAKIYQEI-EVASVDAFQGREKDLIIMSCVRSND 880
+I PY+ Q R F L + Y + + E+ + S+D FQG+E+D+I++S VRSN
Sbjct: 526 LIAPYKAQVRKFNELLFESYNYPN---LRSFSELLTIDSIDGFQGQERDIILLSLVRSNT 582
Query: 881 HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
IGFL+D RR+NVALTRAK +IV+G+ LS P ++ +++
Sbjct: 583 KNEIGFLSDTRRMNVALTRAKRKLIVVGDSATLSAHPFYHAYIDY 627
>gi|301787841|ref|XP_002929345.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Ailuropoda melanoleuca]
Length = 995
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 167/491 (34%), Positives = 244/491 (49%), Gaps = 52/491 (10%)
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLP-----DLNRSQVYAVKHAI-QRPLSLIQGPPG 529
YH ++ EVLF P S P L+ SQ AV A+ Q+ L++I GPPG
Sbjct: 155 YHSGPASSLIEVLFGGSAPSPASEIQPPLFCNASLDASQKEAVSFALSQKELAIIHGPPG 214
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--EAID 587
TGKT T I+ Q V+Q G VL CAPSNIAVD L E++ R +++R+ +R E+I
Sbjct: 215 TGKTTTVVEIILQAVRQ-GLKVLCCAPSNIAVDNLVERLARCKQRILRLGHPARLLESIQ 273
Query: 588 SPVSFLALHNQIRNMEMNSELKKLL----------QLKEETGELSSADEKRYRMLKKNAE 637
S A+ + N ++ ++++K + Q K E + S + + LK+ E
Sbjct: 274 QH-SLDAVLARSDNAQIVADIRKDIDQAFAKNRQTQDKREKSSVWSEIKLLRKELKEREE 332
Query: 638 KSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEPECMVPVILGAKQ 690
++L++ A V+ T GA LK+ F ++IDE QA E C +P +L A++
Sbjct: 333 AAMLESLTSAAVVLATNTGASSDGPLKLLPDSHFDVVVIDECAQALEASCWIP-LLKARK 391
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFR-LEVQYRMHPELSKFPSN 748
IL GDH QL P + KAA AGLS SL ERL G R R L VQYRMH + ++ S+
Sbjct: 392 CILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHRAIMQWASD 451
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQG------QEEIAGSGTSY 798
Y G L L D P + P+L T G +EE S
Sbjct: 452 ALYHGQLTAHPSVAGHLLR--DLPGVAATEETGIPLLLVDTAGCGLFELEEE---DDQSK 506
Query: 799 VNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVA 858
N E V + G++ I VITPY Q L Q + ++ + E+E+
Sbjct: 507 GNPGEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHR-------HPELEIK 559
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
SVD FQGREK+ +++S VRSN +GFL + RR+NVA+TRA+ + V+ + + ++
Sbjct: 560 SVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVNNHAF 619
Query: 919 WNNLLNFYKEQ 929
L++ + E
Sbjct: 620 LKTLVDHFTEH 630
>gi|441501354|ref|ZP_20983473.1| putative helicase [Fulvivirga imtechensis AK7]
gi|441434890|gb|ELR68315.1| putative helicase [Fulvivirga imtechensis AK7]
Length = 641
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/522 (29%), Positives = 256/522 (49%), Gaps = 59/522 (11%)
Query: 443 FSVDFIWKSTSFDRMQLALRKF-AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
V ++ ++ M+ A++K D+ ++ L G E FR H P
Sbjct: 131 LGVQLLFDENAYREMEKAVKKLIKTSDERLNELKEILLAGR---EAQFRSHKP-----VT 182
Query: 502 LPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
P LN SQ A+ + +++I GPPGTGKT T + + +K LVCAPSN A
Sbjct: 183 SPGLNESQNKALNLVLSATDVAIIHGPPGTGKTTTLIQAILETLK-IEKQTLVCAPSNAA 241
Query: 561 VDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPVSFLALHNQIRNMEMNSELKKLLQ 613
VD L +++ G+ V+R+ +R + +D ++ + ++ + +E + +
Sbjct: 242 VDLLADRLGEQGVNVLRIGHPARVTEETLGKTLDVRITKHPDYKNLKALRKQAEEYRSMG 301
Query: 614 LKEETGELSSADEKRYRMLKKNAEKSLLDNAD---------------VICCTCVGAGDPR 658
K + + E+R R+L + ++L D AD VI CT VGA
Sbjct: 302 KKYKRHFGYAEREQRKRLLTE--ARALYDEADHLSFYITSDIIAKSQVIACTMVGANSAM 359
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
L + F+++ +DE+ QA EP +P+I A ++I GDHCQL P + +AAR GL +L
Sbjct: 360 LKGMHFNTVFMDEAAQALEPASWIPII-KADRVIFAGDHCQLPPTIKSFEAARNGLEITL 418
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSL-QNGVCADERKLSKIDFPWPV-- 775
FE+ + LE QYRM+ ++ F S FY+ L N A W +
Sbjct: 419 FEKAIKQNQADVMLEEQYRMNMDIMNFSSRIFYKNRLVANQTVAH----------WKIFE 468
Query: 776 PDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIR------CGMKPEQIGV 826
D+ + F T G E++ S N EA + + ++I + E IG+
Sbjct: 469 GDQTVEFIDTAGCGFFEDVDPETMSSFNTEEAELLLRHFRQYIEEIKALEKFEEVESIGI 528
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
I PY+ Q + L+Q + Q + ++ ++ V +VD+FQG+E+D+I ++ VRSN+ IGF
Sbjct: 529 IAPYKAQVS-LLQDLVQQSNFDEQLVNKLTVNTVDSFQGQERDIIYITLVRSNEKGEIGF 587
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
L + RR+NVA+TRA+ +++IG+ + + ++ L++ E
Sbjct: 588 LANTRRMNVAITRARKKLVIIGDSATIGQNEFYSAFLDYVNE 629
>gi|148906976|gb|ABR16632.1| unknown [Picea sitchensis]
Length = 691
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 227/442 (51%), Gaps = 42/442 (9%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
QRP+ +IQGPPGTGKT ++ + + G +LV APSN AVD + E++ GL +VR
Sbjct: 232 QRPVLVIQGPPGTGKTSVLTELIC-IASRKGERMLVTAPSNAAVDNMVERLADMGLNIVR 290
Query: 578 VCAKSR--EAIDSPVSFLALHNQIRNM---------EMNSELKKLLQLKEETGELSSADE 626
V R A+ S + N++ + ++ ++L+ L+ + +
Sbjct: 291 VGNPVRMSPAVASKSLGSIVENRLASFRRELARKRDDLKNDLRHCLKDDSLAAGIRQLLK 350
Query: 627 KRYRMLKKNAEKS---LLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMV 682
+ + LK+ E++ +L NA V+ CT GA DP + K+ F ++IDE+ QA EP C +
Sbjct: 351 QLKKTLKRKEEETVNEILSNAQVVLCTNTGAADPLVRKLASFDLVIIDEAGQAIEPSCWI 410
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHP 740
P++ G K+ IL GD+CQL PV++ ++A GL SL ER L G L VQYRM+
Sbjct: 411 PILQG-KRTILAGDNCQLAPVILSRRAMEGGLGLSLLERAARLYAGGLSHMLSVQYRMND 469
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP----VPDKPMLFYVTQ--------GQ 788
++ + S Y GSLQ+ L +D P+ + P+L T+ G
Sbjct: 470 AIASWASKEMYGGSLQSSPAVASHLL--VDSPFIKATWITQCPLLLLDTRMPYGSLSLGC 527
Query: 789 EE---IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
EE +AG+G+ Y N EA + + I G+ P I V +PY Q L + +
Sbjct: 528 EEHLDLAGTGSFY-NEGEADILVQHVRSLIFAGVMPMDIAVQSPYIAQVQLLRERLD--- 583
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
+P I VASVD+FQGRE D +++S VRSN +GFL D RR+NVA+TRA+ +
Sbjct: 584 QIPEA--AGIRVASVDSFQGREADAVVISMVRSNTLGAVGFLGDSRRINVAITRARKHVA 641
Query: 906 VIGNPKVLSKQPLWNNLLNFYK 927
V+ + + LL +
Sbjct: 642 VVCDSSTICHNTFLARLLKHIR 663
>gi|295662663|ref|XP_002791885.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279537|gb|EEH35103.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 2130
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 259/540 (47%), Gaps = 121/540 (22%)
Query: 505 LNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLV------------------- 544
+N +Q AV+ A+ +LIQGPPG+GKT T +V L+
Sbjct: 1278 VNPAQAKAVRSALDNDAFTLIQGPPGSGKTKTIIALVGALLSPILREQSISRSSSSSSTR 1337
Query: 545 -----------KQTGS----PVLVCAPSNIAVDQLTEKI---------HRTGLKVVRVCA 580
K T + +LVCAPSN AVD+L + H+ + VVR+
Sbjct: 1338 PASSSSIQSTAKNTPTFKSKKLLVCAPSNAAVDELVMRFKQGIISTDGHKREISVVRLGR 1397
Query: 581 KSREAIDSPV---------------------------SFLALHN---------------- 597
+AI+S V +F H
Sbjct: 1398 S--DAINSNVIDVTLDELVNEKLSGTARKSGNEKDLQTFYLEHKDACTQFNGVRERIDQC 1455
Query: 598 QIRNMEMNSELKKLLQL-KEETGELSSA-DEKR---------YRMLKKNAEKSLLDNADV 646
++++ + EL++ L K + +LS A D+ R +L++ ++++L++A V
Sbjct: 1456 RVKSERVPEELEREFDLLKRKKAQLSKAIDDARDSNLVAARNADLLRRKIQQNVLEDAHV 1515
Query: 647 ICCTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV 704
+C T G+G L I+F +++IDE+ Q+ E ++P+ G + ILVGD QL P V
Sbjct: 1516 LCATLSGSGHEMFQSLDIEFETVVIDEAAQSIELSALIPLKYGCSKCILVGDPKQLPPTV 1575
Query: 705 MCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
+ K A+R QSLF R+ + L+ QYRMHPE+S+FPS FY+G LQ+G D+
Sbjct: 1576 LSKVASRFQYEQSLFVRMQANHPQDVHLLDTQYRMHPEISRFPSAAFYDGRLQDGPDMDK 1635
Query: 764 RKLSKIDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRC 817
+ S+I W + P F+ QG A G S VN E E++TT F
Sbjct: 1636 LR-SRI---WHKSELFGPYRFFDVQGLHSSAPKGHSLVNLAEVRVAMKLYERLTTDFKIY 1691
Query: 818 GMKPEQIGVITPYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
+IG+ITPY+GQ ++ M Q+ I+ IE + DAFQGRE ++II SC
Sbjct: 1692 DFT-NKIGIITPYKGQ----LREMKNQFANKYGNSIFTMIEFNTTDAFQGRECEIIIFSC 1746
Query: 876 VRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
VR++D +GIGFL D RR+NV LTRAK + V+G+ K L + W L+N + ++ +G
Sbjct: 1747 VRASD-RGIGFLADIRRMNVGLTRAKSSLWVLGSSKSLVQGEFWRGLINDAHTRNLVTQG 1805
>gi|449298811|gb|EMC94826.1| hypothetical protein BAUCODRAFT_93353, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1803
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 166/536 (30%), Positives = 241/536 (44%), Gaps = 111/536 (20%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQT-------GSPV---- 551
++NR+Q AV A++ SLIQGPPG+GKT T IV L+ Q+ P+
Sbjct: 1272 NVNRAQSEAVNAALENEGFSLIQGPPGSGKTKTIIAIVGGLLSQSLGSATSGAKPITMPR 1331
Query: 552 ------------------LVCAPSNIAVDQLTEKI---------HRTGLKVVRVC---AK 581
LVCAPSN AVD+L ++ + VVR+ A
Sbjct: 1332 MNGAHIGAGGSDAATKKLLVCAPSNAAVDELVMRLKEGVTTKGGRHHSVNVVRIGRSDAI 1391
Query: 582 SREAIDSPVSFLALH-----------NQIRNMEMNSE-------LKKLLQLKEETGELSS 623
+ + ID + L + +N ++ E L+ L Q K ++G S
Sbjct: 1392 NSQVIDVTMDELVTKRLGGNSANNEATRAKNADLFKEHESVSAALRDLYQ-KRDSGAAQS 1450
Query: 624 ADE--------------------------------KRYRMLKKNAEKSLLDNADVICCTC 651
D + + +K A++++LD A VIC T
Sbjct: 1451 QDSTVLENEIASVRRRKNELGVRIDNVKDQERNAGREAELSRKRAQQAVLDEAHVICATL 1510
Query: 652 VGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
G+G L I+F +++IDE+ Q E ++P+ G + I+VGD QL P V K+A
Sbjct: 1511 SGSGHDMFQSLNIEFETVIIDEAAQCVEMSSLIPLKYGCIKCIMVGDPKQLPPTVFSKEA 1570
Query: 710 ARAGLSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
A+ QSLF R+ P + L+ QYRMHP++S FPS FY+G L++G +
Sbjct: 1571 AKFQYEQSLFVRMQ--NNHPEQVHLLDTQYRMHPDISVFPSRTFYDGLLKDGTGMASLR- 1627
Query: 767 SKIDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-- 822
PW P F+ GQ + A G S VN E + R I E
Sbjct: 1628 ---QRPWHASAVLAPYRFFDVHGQHQSAPKGHSLVNIAEVEIAMALYERLISDFKGYEYN 1684
Query: 823 -QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+IG+ITPY+ Q L ++ I +E + DAFQGRE ++II SCVR++
Sbjct: 1685 GRIGIITPYKSQLRMLRD--RFSQRFGNTISDVVEFNTTDAFQGRESEIIIFSCVRASPA 1742
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
GIGFL D RR+NV LTRAK + V+GN LS+ W L+ + + + G L
Sbjct: 1743 GGIGFLQDIRRMNVGLTRAKSSLWVLGNSDSLSRGQYWRKLVEDARARDAYITGDL 1798
>gi|261350062|ref|ZP_05975479.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
gi|288860848|gb|EFC93146.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
Length = 658
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 156/499 (31%), Positives = 249/499 (49%), Gaps = 87/499 (17%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV++A+ LI GP GTGKT T ++ Q V+Q+ + VLV A SN AVD
Sbjct: 172 LNESQKNAVRNAVNTENFFLIHGPFGTGKTRTLVELIQQEVRQS-NKVLVTAESNSAVDN 230
Query: 564 LTEKIHRTG-LKVVRVCAK---SREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETG 619
+ +++ + LK+ R+ S+E I +++ + ++Q+ ++N K++ Q+ E
Sbjct: 231 ILDRLSQNKKLKITRLGHPQRVSKENIAYSLAYKSENHQL-TCKINKNYKRIEQISETRD 289
Query: 620 ELSS----------------------------------------ADEK------RYRMLK 633
+ +EK + + L+
Sbjct: 290 RFTKPTPQYRRGFSDSDILYNASKGKGGRGISSSKMESMANWLLENEKISEIHYKIKKLE 349
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
K +++++D+I T A +++ KF+ +++DE+ QAT P ++P + A++ IL
Sbjct: 350 NKIVKDIINSSDIILSTNSTAAIEEIVRTKFNVVIVDEASQATIPSILIP-LSKARRFIL 408
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNFFYE 752
GDH QL P ++ KKA L ++LFE L+ + L VQYRM+ L KFP+ FY
Sbjct: 409 AGDHKQLPPTIISKKAH--FLEKTLFEELIKKYPNKSSLLNVQYRMNSFLMKFPNLEFYN 466
Query: 753 GSLQNGVCADERKLSKI------------DFPWPVPD--KPMLFYVT----QGQEEIAGS 794
G+L++ D L +I D + + KP+LF T +E+
Sbjct: 467 GNLKSDSSVDNINLDEIIDLEELSRLKESDVEKQLHNNLKPLLFIDTSNLKNNEEKHLKD 526
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
S +N++EA I ++ G+ P+ IG+I+PY Q + Q +P
Sbjct: 527 SKSIINQSEADIATSIAKFYLGTGINPKDIGIISPYADQVNLI------QDKIP------ 574
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
IEV SVD FQGREK++II+S VRSN ++ IGFL D RRLNVA+TRAK +IVIGN L
Sbjct: 575 IEVKSVDGFQGREKEIIIISTVRSNKNKDIGFLKDLRRLNVAITRAKRKLIVIGNKNTLK 634
Query: 915 KQPLWNNLLNFYKEQKVLV 933
++ L+ F + +L+
Sbjct: 635 GNSTYSKLIKFCAKNDLLI 653
>gi|336274090|ref|XP_003351799.1| hypothetical protein SMAC_00344 [Sordaria macrospora k-hell]
gi|380096080|emb|CCC06127.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 712
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/475 (32%), Positives = 238/475 (50%), Gaps = 82/475 (17%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ QL+++ +LVC PSNI+V
Sbjct: 228 PTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLRRDLR-ILVCGPSNISV 286
Query: 562 DQLTEKIHRTGLKVVR----------VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL 611
D + E++ L ++R V + S + + + A+ +R EM+++ +
Sbjct: 287 DNIVERLSPHKLPILRLGHPARLLPSVLSHSLDVLTTTSDAGAIVKDVR-AEMDAKQASI 345
Query: 612 LQLKEETGELSSADEKR--YRMLKKNAE----------KSLLDNADVICCTCVGAGDPRL 659
+ + + E+R Y LK+ + L+ + V+ T GAG L
Sbjct: 346 RKTR-------NGRERRVVYTELKELRKEYRERERRCVSDLVGRSKVVLATLHGAGGYHL 398
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV--MCKKAARAG---- 713
+F ++IDE+ QA E +C VP +L AK+ +L GDH QL P + + KA++
Sbjct: 399 KNEEFDVVIIDEASQALEAQCWVP-LLWAKKAVLAGDHLQLPPTIKSLNSKASKGDQPKE 457
Query: 714 ----LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
L +LF+RL+ L + L QYRMH ++ +FPS+ YE L ER L
Sbjct: 458 RGPTLETTLFDRLLALHGPAIKRMLTTQYRMHEKIMRFPSDELYESKLVAAEHVRERLLK 517
Query: 768 KIDFPWPVPD-----KPMLFYVTQG-------QEEIAGSGT---------------SYVN 800
D + V D +P++F TQG +EE+ +G+ S N
Sbjct: 518 --DLLYEVEDNDDTTEPLVFIDTQGGDFPEKNEEELDNNGSATDKKKAIKRSLHGESKSN 575
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
EA+ V++ + G++PE I V+TPY Q + L + P IE+ SV
Sbjct: 576 EMEAALVKQHVRSLVEAGVRPEDIAVVTPYNAQLSILAP---LKDEFPG-----IELGSV 627
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
D FQGREK+ +I S VRSND +GFL + RRLNVA+TR K + VIG+ + + K
Sbjct: 628 DGFQGREKEAVIFSLVRSNDEGAVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKK 682
>gi|148675453|gb|EDL07400.1| mCG23072, isoform CRA_b [Mus musculus]
Length = 2722
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 244/498 (48%), Gaps = 81/498 (16%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK----------------QTG 548
LN+SQ AV+ A+Q+ ++IQGPPGTGKTV IVY + Q G
Sbjct: 2203 LNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQLG 2262
Query: 549 SP-VLVCAPSNIAVDQLTEKIHR--TGLKVVRVCAKSREAIDSPVS-------------- 591
P VL C PSN +VD L + R T +K +RV + EA + P+
Sbjct: 2263 GPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQE 2322
Query: 592 --------FLALHNQIRNME--MNSELKKL-LQLKEETGELSSADEKRYRMLKKNAEKSL 640
+ LH++IR +E++K QL+E G++ S ++ R R+L K A K
Sbjct: 2323 GRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLRE--GKIFSKEDLRVRVLGK-ARKHE 2379
Query: 641 LDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK---QLILVGDH 697
L+ VI CTC A L + ILIDE+ ATEPE ++P++ +K +++L+GDH
Sbjct: 2380 LERHSVILCTCSCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGDH 2439
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QL PVV ++ G+ +SLFER I L+ QYRMH ++ FPS FY G L+
Sbjct: 2440 KQLRPVVKSEQLQSLGMDRSLFERYHRDAIM---LDTQYRMHKDICSFPSVEFYGGKLKT 2496
Query: 758 GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT--TRFI 815
+D R+L I P ++F QG E+ T N +N E++T R I
Sbjct: 2497 W--SDLRRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRII 2554
Query: 816 RC-----GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
+ + P+ I V+TPY Q A + + + +G + V S+ QG E
Sbjct: 2555 KQLTLDRTVDPKDIAVLTPYNAQAAAISRGLMQRG------VTGVTVTSITKSQGSEWRY 2608
Query: 871 IIMSCVRSNDHQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
+I+S VR+ + GF+ DP ++NVA+TRA+ + +IG+ +L P
Sbjct: 2609 VIVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCCP 2668
Query: 918 LWNNLLNFYKEQKVLVEG 935
LW+ LL+F + Q LV
Sbjct: 2669 LWHRLLDFCEAQHSLVSA 2686
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 183/480 (38%), Gaps = 70/480 (14%)
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR--------PLSLIQGPPGTGKT 533
H V L C LP + P N Q AV R P LI GP GTGKT
Sbjct: 492 HLVVPDLPACTLPHPWPTPPSFRGNHKQKLAVGLIAGRRPEGTKHIPPLLIYGPFGTGKT 551
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
T A ++V+Q + VL+C +N A D RE VS
Sbjct: 552 YTLAMAALEVVQQPHTKVLICTHTNSAADIYI-----------------REYFHDYVS-- 592
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
+ H + + + + Q T + E R + + L+ + V+ T
Sbjct: 593 SGHPEATPLRVMYADRPPRQTDPTTLQYCCLTEDR-QAFRPPTGPELVHHRLVVTTT--- 648
Query: 654 AGDPRLLKIK---FHSILIDESMQATEPECMVPV--ILGAKQLILVGDHCQLGPVVMC-- 706
R L++ F I IDE+ Q E E ++P+ L +++L GDH Q+ P +
Sbjct: 649 -SQARELQVPAGFFSHIFIDEAAQMLECEALIPLSYALSLTRVVLAGDHMQVTPRLFSVP 707
Query: 707 -KKAARAGLSQSLF-----ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
K+AR L LF E + YR + F S+ FY N +
Sbjct: 708 RDKSARHTLLHRLFLYYQQEAHKIAQQSRIIFHENYRSTAAIINFVSHHFYLAK-GNPIQ 766
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIR 816
A + P P++F G E S TS++N E + V +I +
Sbjct: 767 ASGK------VPRHPQHYPLMFCHVAGSPEQDMSMTSWLNSAEVTQVVEKVREIYNTWPH 820
Query: 817 CGMKPEQIGVITPYEG-QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
C EQ + G Q + L Q ++ + E+ V S + GRE ++++S
Sbjct: 821 CWGPREQRHICAVSHGAQVSALRQELRRRN------LGEVSVGSFEILPGREFRVVVLSS 874
Query: 876 VRS-NDHQGIG-----FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL-NFYKE 928
V + N G F +PR LN +TRA+ ++ +G+ L NL +F +E
Sbjct: 875 VHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGACRNLWRSFIRE 934
>gi|410075095|ref|XP_003955130.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
gi|372461712|emb|CCF55995.1| hypothetical protein KAFR_0A05600 [Kazachstania africana CBS 2517]
Length = 2250
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 170/523 (32%), Positives = 246/523 (47%), Gaps = 115/523 (21%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ + + SLIQGPPGTGKT T I+ Y L ++ SP
Sbjct: 1305 LNTSQAEAIVNTVSTEGFSLIQGPPGTGKTKTILGIIGYFLSTRSSSPSNAIKVAAETTT 1364
Query: 551 -----------VLVCAPSNIAVDQ----LTEKIHRTGLKVVR---VCAKSREAIDSPVSF 592
+L+CAPSN AVD+ L E ++ KV + V +A++ +
Sbjct: 1365 LNIEQLLKKQKILICAPSNAAVDEICIRLKEGVYDKNGKVFKPNLVRVGRSDAVNIAIKD 1424
Query: 593 LALHNQI------RNMEM--NSELKKLL------------QLKEETGELSSA-------- 624
L L + +N E N EL + +L E G ++S
Sbjct: 1425 LTLEEIVEKKVAQKNYEFTQNPELDRNFNTMVAKRRALREKLNNENGSVTSTLSTDDIAK 1484
Query: 625 -------------------DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGD 656
DE R R + ++NA+ +L ++D+IC T G+
Sbjct: 1485 LQLEIRELSRQLNVLGKERDEIRERNSVNYRNRDLDRRNAQSQVLASSDIICATLSGSAH 1544
Query: 657 PRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
L L +KF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A+
Sbjct: 1545 DVLISLGVKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVVSGAASNFKY 1604
Query: 715 SQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW- 773
+QSLF R+ P+ L VQYRMHP +S FPS+ FY G L++G D PW
Sbjct: 1605 NQSLFVRMEK-NTTPYLLNVQYRMHPAISYFPSSEFYGGLLKDGPNMDAINQR----PWH 1659
Query: 774 -PVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE---QIGVI 827
P P F+ + G++E SY N E +E I F K +IG+I
Sbjct: 1660 NTPPLTPYKFFNIVSGRQEQNSKTMSYTNIEEIKVAIELIDYLFRNFDQKVNFKGKIGII 1719
Query: 828 TPYEGQ-----RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND-H 881
+PY Q R F+V Y G A I I+ ++D FQG+EK++II+SCVR++D
Sbjct: 1720 SPYREQMQKMRREFVV----YFG---ASIKNFIDFNTIDGFQGQEKEIIIISCVRADDTS 1772
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
+GFL D RR+NVA TRAK + ++G+ K L K LW NL++
Sbjct: 1773 SSVGFLKDFRRMNVAFTRAKTSMWILGHQKSLYKNKLWRNLID 1815
>gi|327402000|ref|YP_004342839.1| DNA helicase [Archaeoglobus veneficus SNP6]
gi|327317508|gb|AEA48124.1| DNA helicase [Archaeoglobus veneficus SNP6]
Length = 664
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 254/492 (51%), Gaps = 77/492 (15%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV A+ R LI GP GTGKT T ++ Q VK+ G+ VL A SN+AVD
Sbjct: 171 LNESQREAVSLALGSRDFFLIHGPFGTGKTRTLTELILQEVKR-GNKVLATAESNVAVDN 229
Query: 564 LTEKIHRTGLKVVRV---CAKSREAIDSPVSF-LALHNQIRNME-MNSELKKLLQLKEET 618
L E++ +++VR+ SR I+S + F + H + E + E +KL++ ++
Sbjct: 230 LVERLA-GKVRLVRLGHPSRISRHLIESSIFFQVEKHERFAKAEKLRDEAEKLIRQRDSE 288
Query: 619 -------------GELSSADE--KR-----YRMLKKNAE--------KSLLD-------- 642
E+ A E KR YR+LK A+ + LLD
Sbjct: 289 VKPSPHWRRGLSDEEIVKAAERGKRFRGIPYRVLKSMAKWIKLNREIQKLLDEAREIEEE 348
Query: 643 -------NADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
++ V+ T A + ++F +IDE+ QAT P ++P I ++ +L G
Sbjct: 349 IAREIINSSQVVLATNSSAALELIKDVEFDVAVIDEASQATIPSVLIP-ISKTRRFVLAG 407
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
DH QL P V+ ++AA LS++LFE+L+ LEVQYRM+ +L +FPS FY G
Sbjct: 408 DHKQLPPTVLSQEAAE--LSETLFEKLIEAYPENSKMLEVQYRMNKKLMEFPSREFYGGR 465
Query: 755 LQNGVCADERKLSKIDFPWP--------VPDKPMLFYVT-----QGQEEIAGSGTSYVNR 801
L+ L+ + P + +P++F T + + + GS S N
Sbjct: 466 LKADDSVRNITLADLGVKEPKFGFWNEVLGSEPLVFIDTSKCADRWERQRKGS-PSRENE 524
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
EA ++++ R ++ G+K QIGVITPY+ Q + +++ K +EIEV +VD
Sbjct: 525 LEARIIKELVERLLKIGVKAGQIGVITPYDDQVDLIKRYI--------KGIEEIEVKTVD 576
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
+QGREKD+II+S VRSN+ +GFL+D RRLNV+LTRA+ +I IG+ + LS +
Sbjct: 577 GYQGREKDVIIISFVRSNERGEVGFLDDLRRLNVSLTRARRKLIAIGDTETLSTNETYRR 636
Query: 922 LLNFYKEQKVLV 933
+ F K++ LV
Sbjct: 637 FIEFVKKEGKLV 648
>gi|340521489|gb|EGR51723.1| Hypothetical protein TRIREDRAFT_55637 [Trichoderma reesei QM6a]
Length = 1734
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 227/464 (48%), Gaps = 65/464 (14%)
Query: 497 FSAPNLP-----DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL-VKQTGSP 550
F +P+ P LN SQ AV+ A + L + GPPGTGKT T I+ L +
Sbjct: 1287 FPSPSPPAEADASLNPSQRAAVEAAQRNNLICLWGPPGTGKTQTIVAIIRTLQFDPRSAR 1346
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHN-QIRNMEMNSELK 609
+LV AP++ AVD V+R K E D AL N +I + + +E++
Sbjct: 1347 ILVTAPTHNAVDN-----------VMRRYLKRIEQED------ALQNSKIVPLRVATEVR 1389
Query: 610 KLLQ-LKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
K+ + L++ T + + E K + A +I TC+GAG L F +++
Sbjct: 1390 KVGEDLRKYTCDALAGQEVYSSQDAMRKAKKRVKEAGIIFTTCIGAGLGLLRDQFFDTVI 1449
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL-----V 723
+DE+ Q TEP +VP+I G ++ ILVGDH QL P V A SLFERL +
Sbjct: 1450 VDEASQQTEPASLVPLIKGCQKAILVGDHVQLRPTVQ-NIALALNFDVSLFERLYTRQEM 1508
Query: 724 VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP--------V 775
G+ L+ QYRMHP + F S FY+G L +G+ +R + FPWP
Sbjct: 1509 TRGMEKVMLDTQYRMHPSICSFISKEFYDGKLLSGLTGKDRPMPPSSFPWPEAPSTSSSA 1568
Query: 776 PDKPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRFIRCGMKPE-----QIGV 826
M+F G+E++ S N+ +A S + + T +PE I V
Sbjct: 1569 SAPRMIFIECAGREDLGHKSKS--NKEQADLCHSICKLLRTSAAGSSTEPEANDDASIAV 1626
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+TPY Q L + + +P IE++S+D FQGRE D++I VR N+ + IGF
Sbjct: 1627 LTPYSRQSEVLKRLL---SGIP-----NIEISSIDGFQGREADIVIFVTVRCNESREIGF 1678
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLS-------KQPLWNNLL 923
L D RR+NVALTRAKYG+I++GN L+ +W LL
Sbjct: 1679 LKDLRRMNVALTRAKYGMIIVGNRATLTGGREEEESTGMWRRLL 1722
>gi|328875613|gb|EGG23977.1| AN1-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 1035
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 237/466 (50%), Gaps = 55/466 (11%)
Query: 500 PNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
P LN++Q+ AV+ A+ ++LI GPPGTGKT T + Q V++ G VL CAPSN
Sbjct: 231 PITSKLNQTQIKAVEFALGSSDIALIHGPPGTGKTTTVVEFIVQCVRR-GQRVLACAPSN 289
Query: 559 IAVDQLTEK-IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQ---- 613
+AVD + EK I G+ RV +R I +S L ++ +N E ++ L +
Sbjct: 290 LAVDNMLEKLIAVNGINPTRVGHPAR--IMEGLSKYTLDHKTKNSEEAEVVRGLRKEIAD 347
Query: 614 -LKEETGELSSADEKRY-----RMLKKNAE-------KSLLDNADVICCTCVGAGDPRLL 660
LKE + + D +R + L+K+ + ++ N+ V+ TC GA D L
Sbjct: 348 LLKETKSKGTDRDRRRVIGSTIKDLRKDLRSREVVLVEQVIKNSKVVLSTCTGAADYSLR 407
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
F ++IDE+ QA E C + + G ++L+L GDH QL P + AA+ GLS +LFE
Sbjct: 408 HHDFDIVVIDEAGQALEASCWIAIRKG-RRLVLAGDHQQLPPTIHSDDAAKDGLSVTLFE 466
Query: 721 RLV-VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS---------KI 769
RL+ + G + RL +QYRM+ + + S FY + ADE S KI
Sbjct: 467 RLIRIYGDKISRLLSIQYRMNQSIMNWSSKEFYNSEMH----ADESVASHLLQGLNPEKI 522
Query: 770 DFPWPVPDKPMLFYVTQG------QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ 823
P P++ T G E+ G S N EA V + ++ G+
Sbjct: 523 K-TTPTTTCPIVLIDTSGCDMEESMEDEIGVDQSKSNIGEARVVATYVKKLLQHGVLESN 581
Query: 824 IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN-DHQ 882
IG+I+PY GQ L ++ + +IE+ +VD FQGREK++II+S VRSN
Sbjct: 582 IGIISPYNGQVKCLKAVIESK---------QIEIGTVDGFQGREKEVIIISMVRSNPPPH 632
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
+GFL + RR NVA+TRA+ ++++ + +S P ++++ +E
Sbjct: 633 NVGFLKEDRRTNVAITRARRQVVIVADCLTISSYPFLKRMVDYCRE 678
>gi|366997484|ref|XP_003678504.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
gi|342304376|emb|CCC72166.1| hypothetical protein NCAS_0J01870 [Naumovozyma castellii CBS 4309]
Length = 2314
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 257/523 (49%), Gaps = 113/523 (21%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKT----------------------------V 534
+LN SQ A+ + + + SLIQGPPGTGKT
Sbjct: 1301 NLNTSQADAIVNTVAKDGFSLIQGPPGTGKTKTILGIIGYFLSTRKMLPSNAIKTPTNSS 1360
Query: 535 TSATIVYQLVKQTGSPVLVCAPSNIAVDQL-----------TEKIHRTGLKVV------- 576
TS+ + Q++K+ +L+CAPSN AVD++ K+ R L V
Sbjct: 1361 TSSMTIDQMLKKQK--ILICAPSNAAVDEICIRLKDGIFDRNGKLFRPNLVRVGRSDVVN 1418
Query: 577 --------------RVCAKSREAIDSP---VSFLALHNQIRNME---------------M 604
R+ K+ E ++P +F A ++ R +
Sbjct: 1419 VQIKDLTLEELVDKRLAQKNYEFSNNPELERNFSAAVSKRRTLRAQLDAEEGTPTSKLPT 1478
Query: 605 NSELKKLLQLKEETGELSS----ADEKRYR---------MLKKNAEKSLLDNADVICCTC 651
N K L+++E + +++ DE R R + ++NA+ +L +D+IC T
Sbjct: 1479 NDIAKIQLEIRELSKQINELGRQRDEMRERNSVNYRNRDLDRRNAQAQILACSDIICSTL 1538
Query: 652 VGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
G+ L L IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P V+ A
Sbjct: 1539 SGSAHDVLAGLGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVLSGAA 1598
Query: 710 ARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
+ +QSLF R+ P+ L+VQYRMHPE+SKFPS FY G L++G +E +
Sbjct: 1599 SNFKYNQSLFVRMEK-NTTPYLLDVQYRMHPEISKFPSAEFYNGRLKDGPNMEEVNMR-- 1655
Query: 770 DFPW--PVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGMKPE--- 822
PW P P F+ + G+++ SY+N E +E + + F + + +
Sbjct: 1656 --PWHSTSPFSPYKFFDIVSGKQQQNKKTMSYINMEEIQVALELVDSLFQQFENRIDFTG 1713
Query: 823 QIGVITPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+IGVI+PY Q + + ++Y G I Q ++ ++D FQG+EK++II+SCVR++D
Sbjct: 1714 KIGVISPYREQMQRMRKEFLRYFG---GTIMQYVDFNTIDGFQGQEKEIIIISCVRADDT 1770
Query: 882 Q-GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
Q +GFL D RR+NVA TRAK + ++G+ + L K LW +L+
Sbjct: 1771 QSSVGFLKDFRRMNVAFTRAKASLWILGHQQSLIKNKLWRDLI 1813
>gi|116193595|ref|XP_001222610.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
gi|88182428|gb|EAQ89896.1| hypothetical protein CHGG_06515 [Chaetomium globosum CBS 148.51]
Length = 2053
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 251/529 (47%), Gaps = 100/529 (18%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV-----KQTGS-PV------ 551
LN Q A+ +A + +L+QGPPGTGKT T +V L+ +G+ PV
Sbjct: 1320 LNPGQARAILNAKENDGFTLVQGPPGTGKTKTIVAMVGCLLTGVLKSSSGAVPVVRPGAA 1379
Query: 552 ----------LVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSRE--------AIDSPVSFL 593
LVCAPSN AVD+L ++ + G+K + + E AI++ V +
Sbjct: 1380 SINQAPSKKLLVCAPSNAAVDELVLRL-KAGVKTMNGASHKIEVIRLGRTDAINAAVKDV 1438
Query: 594 ALHNQIR---NMEMN----SELKKLLQ----LKEETGEL--------SSADE-------- 626
L ++ + MN S+ +KL Q LKE+ EL +S D
Sbjct: 1439 TLDELVKARMDSAMNNSGPSDREKLHQEAGMLKEKITELRPQLEAARASGDRTFIMKLQR 1498
Query: 627 ---------------------------KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL 659
+ + ++ ++ +LD A V+C T G+G
Sbjct: 1499 EFDDLKHRQAHVGAKIDANKSNGNTFAREVEIKRRQIQQDILDKAQVLCATLSGSGHEMF 1558
Query: 660 --LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 717
L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR G QS
Sbjct: 1559 KNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYGYDQS 1618
Query: 718 LFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
LF R+ + L ++QYRMHPE+SKFPS FYEG LQ+G + ++ PW
Sbjct: 1619 LFVRMQKNHAKDVHLLDMQYRMHPEISKFPSKEFYEGLLQDGADMGQLRMQ----PWHQS 1674
Query: 777 D--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYE 831
+ P F+ +G + S VN E ++ RF E +IG+ITPY+
Sbjct: 1675 ELLGPYRFFDVKGSQSRGPRNQSLVNDEELKVAMQLYHRFRTDYGNVELKGKIGIITPYK 1734
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
Q L Q ++ I +EIE + DAFQGRE ++II SCVR++ GIGF+ D R
Sbjct: 1735 AQLFRLRQ--RFAEKYGDGIAEEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIR 1792
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNL 940
R+NV LTRA+ + ++G+ + L + W L+ KE+ G + L
Sbjct: 1793 RMNVGLTRARSSLWILGDSRALVQGEFWGKLIEDAKERDRYTSGNVMTL 1841
>gi|73983575|ref|XP_540807.2| PREDICTED: DNA-binding protein SMUBP-2 [Canis lupus familiaris]
Length = 1010
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 241/488 (49%), Gaps = 46/488 (9%)
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLP-----DLNRSQVYAVKHAI-QRPLSLIQGPPG 529
YH ++ EVLF P S P L+ SQ AV A+ Q+ L++I GPPG
Sbjct: 157 YHSGPASSLIEVLFGGSAPSPASNTEPPLFCNTSLDASQKEAVSFALSQKELAIIHGPPG 216
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR--EAID 587
TGKT T I+ Q V+Q G VL CAPSNIAVD L E++ R K++R+ +R E+I
Sbjct: 217 TGKTTTVVEIILQAVRQ-GLKVLCCAPSNIAVDNLVERLARCKQKILRLGHPARLLESIQ 275
Query: 588 SPVSFLALHNQIRNMEMNSELKKLL----------QLKEETGELSSADEKRYRMLKKNAE 637
S A+ + N ++ ++++K + Q + E + + + + LK+ E
Sbjct: 276 QH-SLDAVLARSDNAQIVADIRKDIDQAFVNNRQTQDRREKSSVWNEVKLLRKELKEREE 334
Query: 638 KSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEPECMVPVILGAKQ 690
++L++ A V+ T GA LK+ F ++IDE QA E C +P +L A++
Sbjct: 335 AAMLESLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEASCWIP-LLKARK 393
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFR-LEVQYRMHPELSKFPSN 748
IL GDH QL P + KAA AGLS SL ERL G R R L VQYRMH + ++ S
Sbjct: 394 CILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQYRMHQAIMRWASE 453
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQ---EEIAGSGTSYVNR 801
Y G L L D P + P+L T G E S N
Sbjct: 454 ALYHGQLTAHPSVAGHLLR--DLPGVAATEETGIPLLLVDTAGCGLFELEDDDDQSKGNP 511
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
E V + G++ I VITPY Q L Q + ++ + E+E+ SVD
Sbjct: 512 GEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHR-------HPELEIKSVD 564
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
FQGREK+ +++S VRSN +GFL + RR+NVA+TRA+ + V+ + + +S
Sbjct: 565 GFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHAFLKT 624
Query: 922 LLNFYKEQ 929
L++ + E
Sbjct: 625 LVDHFTEH 632
>gi|330944918|ref|XP_003306458.1| hypothetical protein PTT_19600 [Pyrenophora teres f. teres 0-1]
gi|311316071|gb|EFQ85482.1| hypothetical protein PTT_19600 [Pyrenophora teres f. teres 0-1]
Length = 674
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 165/495 (33%), Positives = 241/495 (48%), Gaps = 83/495 (16%)
Query: 493 LPKHFSAPNLP---------DLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQ 542
LP + P+ P LN SQ A++ A+ R ++LI GPPGTGKT T ++ Q
Sbjct: 191 LPSDVNDPSNPLYKLEWIDASLNDSQQEAIRFALASREVALIHGPPGTGKTHTLIELILQ 250
Query: 543 LVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR----------VCAKSREAIDSPVSF 592
L+KQ +LVC PSNI+VD + E++ + +VR V + S + +
Sbjct: 251 LLKQKLR-LLVCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSVLSHSLDVLTRTSEA 309
Query: 593 LALHNQIRNMEMN---SELKKLLQLKEETGELSSADEKR--YRMLKKNAEKSLLDNADVI 647
AL +R EM+ S ++K KE + E R +R +K +L+ + V+
Sbjct: 310 AALVQDVRK-EMDDKQSSIRKTRNAKERRQIYTELKELRQEFREREKGCVNNLVSGSKVV 368
Query: 648 CCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI-LGAKQLILVGDHCQLGPVVMC 706
T GAG L +F +++DE+ QA E +C VP++ + A +L+L GDH QL P +
Sbjct: 369 LATLHGAGGFHLKGQEFDVVIVDEASQALEAQCWVPLLWVKASKLVLAGDHLQLPPTIKS 428
Query: 707 ------------------------KKAARAGLSQSLFERLVVLGIRPFR--LEVQYRMHP 740
K + L +LF+RL+ L + L QYRMH
Sbjct: 429 LNSKESKAAKKDAKKSKDETDEAEKSTSSMTLETTLFDRLLALHGPSIKRMLTTQYRMHE 488
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD-----KPMLFYVTQG---QEEIA 792
+ +FPS+ Y+ L ER L D P+ V D +P++F+ TQG E+I
Sbjct: 489 RIMRFPSDELYDSKLIAADLVKERLLK--DLPYEVEDTEDSREPLVFWDTQGGEFPEKIE 546
Query: 793 GSGT------------SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH 840
SG S N EA+ V+ + I G+K E I V+TPY Q A L
Sbjct: 547 DSGVIGKGGKGMNVGDSKSNEAEAALVKMHVSNLISAGVKAEDIAVVTPYNAQLALL--- 603
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
G + + Y IE+ SVD FQGREK+ +I+S VRSN +GFL + RRLNVA+TR
Sbjct: 604 ----GGMLKEAYPGIELGSVDGFQGREKEAVIVSTVRSNSKHEVGFLGEKRRLNVAMTRP 659
Query: 901 KYGIIVIGNPKVLSK 915
K + VIG+ + +SK
Sbjct: 660 KRHLCVIGDSETISK 674
>gi|407926953|gb|EKG19860.1| PhoH-like protein [Macrophomina phaseolina MS6]
Length = 1608
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 221/463 (47%), Gaps = 54/463 (11%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV-KQTGSPVLVCAPSN 558
PN P LN SQ+ AV A++ PL L+ GPPGTGKT T I+ QL+ +++ VLV AP++
Sbjct: 1177 PNDPSLNESQLAAVSAALKHPLCLLWGPPGTGKTRTIVAILIQLLLRESTGRVLVTAPTH 1236
Query: 559 IAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
AVD + K L++ + + + ++R ++ + K
Sbjct: 1237 NAVDNVLRKF----LELKGIAQTKMTPLRVSTDVAKVSEELRPYTCDAMMGK-------- 1284
Query: 619 GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
D + +K A K + D A +I TC+GAG L F ++L+DE+ Q TEP
Sbjct: 1285 ------DINEHFDARKKAAKRIKD-ARLIFTTCIGAGLGLLRGESFDTVLVDEASQQTEP 1337
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR---AGLSQSLFERLVVLGIRPFRLEVQ 735
+VP+ G + +LVGDH QL V + L +SL+E G+ + VQ
Sbjct: 1338 ASLVPLTKGCEHAVLVGDHVQLRATVQMQSLVTDFDISLFESLYEAADSPGLAKVMINVQ 1397
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV-----PDKPMLFYVTQGQEE 790
YR+H ++ F S FY+ L D R L FPWP P + M E+
Sbjct: 1398 YRIHRQICAFSSKEFYQERLHTAAQDDARPLPASAFPWPALPSGHPAR-MALIPCASPED 1456
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRC--GMKPEQ---IGVITPYEGQRAFLVQHMQYQG 845
I S NR +A ++ + + G P + V+TPY QR L Q + G
Sbjct: 1457 IGRKSKS--NRGQALLCREVCSHLLSFSPGSTPATSLTVAVLTPYSRQRELLKQMLPKSG 1514
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
L E++S+D +QGRE D+++ R N H +GFL+D RRLNV +TRAK G++
Sbjct: 1515 ML--------EISSIDGYQGREADVVVFVTTRCNVHGQLGFLSDMRRLNVTMTRAKAGVV 1566
Query: 906 VIGNPKVL---------SKQPLWNNLLNFYKEQKVLVEGPLNN 939
+IG+ L SKQ +W LL +E ++ VE N
Sbjct: 1567 IIGHKDTLCGGAESDTPSKQ-IWRRLLASCREMELGVETESNG 1608
>gi|348505663|ref|XP_003440380.1| PREDICTED: DNA-binding protein SMUBP-2 [Oreochromis niloticus]
Length = 995
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 269/560 (48%), Gaps = 67/560 (11%)
Query: 422 GDEVGLELKSSAGAPTEATTGF-----------SVDFIWKSTSFDRMQL-ALRKFAVDDQ 469
GD VGL + A ++ +TG + D + SFD L L K A D
Sbjct: 83 GDIVGLYDTTGCAAASQISTGIVTRVGQASISVAFDDLKDGHSFDSDALYNLLKLAND-- 140
Query: 470 SVSAYIYHRLL----------GHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVK 514
V+ R L N+ VLF P S PN +L+ SQ AV
Sbjct: 141 -VTYKRMKRALNTLNGYNNGPASNLISVLFGDTKPTSQSQPNKVEFFNSNLDDSQREAVS 199
Query: 515 HAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
A+ QR L++I GPPGTGKT T I+ Q VK G VL CAPSN+AVD L E++ +
Sbjct: 200 FALSQRELAVIHGPPGTGKTTTVVEIILQAVKH-GQKVLCCAPSNVAVDNLVERLAQCKA 258
Query: 574 KVVRVCAKSR--EAIDSPVSFLALHNQIRNMEMNSELKKLLQ-----LKEETGELSSADE 626
KV+R+ +R E+I S A+ Q N + +E++K + +K+E GE +
Sbjct: 259 KVLRLGHPARLLESIQKH-SLDAILAQSDNANIIAEIRKDIDKAFTGMKKEKGERGNLKR 317
Query: 627 KRYRMLK--KNAEKS----LLDNADVICCTCVGAGDPRLLKI----KFHSILIDESMQAT 676
+ + K KN E + +L +ADV+ T GA D LK F ++IDE QA
Sbjct: 318 EIGELRKELKNRETAAIAQILKSADVVLSTNTGACDDGPLKFLPAEHFDWVVIDECAQAL 377
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEV 734
E C + +L A++ IL GD+ QL P + + AA GLS SL ERL+ + G R L V
Sbjct: 378 ESSCWI-ALLRARKCILAGDYKQLPPTIKSQMAASKGLSLSLMERLIQMYGDSVVRMLTV 436
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLFYVTQG----Q 788
QYRM+ + ++ S Y+G L + L + V + P+L T G +
Sbjct: 437 QYRMNSAIMQWASKEMYQGRLTAHSSVEGHLLKDLAGVACVEETSTPLLLIDTAGCGLSE 496
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP 848
E+A S N E V+ G+K + I VI PY Q L Q + +
Sbjct: 497 MEVADE-QSKGNTGEVDIVDLHIKALTEAGVKAKDIAVIAPYNLQVDLLRQKLSAK---- 551
Query: 849 AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
+ E+E+ SVD FQGREK+ +++S VRSN +GFL + RR+NVA+TRA+ I V+
Sbjct: 552 ---HPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRHIAVVC 608
Query: 909 NPKVLSKQPLWNNLLNFYKE 928
+ + + +L++ E
Sbjct: 609 DTQTVQNHGFLKSLIDHMTE 628
>gi|115453945|ref|NP_001050573.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|50399951|gb|AAT76339.1| putative DNA helicase [Oryza sativa Japonica Group]
gi|108709563|gb|ABF97358.1| DNA helicase family protein, expressed [Oryza sativa Japonica
Group]
gi|113549044|dbj|BAF12487.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|215704640|dbj|BAG94268.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193224|gb|EEC75651.1| hypothetical protein OsI_12407 [Oryza sativa Indica Group]
gi|222625290|gb|EEE59422.1| hypothetical protein OsJ_11580 [Oryza sativa Japonica Group]
Length = 651
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/453 (32%), Positives = 237/453 (52%), Gaps = 32/453 (7%)
Query: 499 APNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
+P +L+ SQ A+ A++ R + L+ GPPGTGKT T I+ Q VK+ GS +L CA S
Sbjct: 196 SPFNKNLDESQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKR-GSKILACAAS 254
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVS--FLALHNQIRNMEMNSELK--- 609
NIAVD + E++ R K+VR+ +R + +DS + L N ++ E+K
Sbjct: 255 NIAVDNIVERLSRYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLN 314
Query: 610 -KLLQLKEETG------ELSS-ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
KLL+ K++ EL + A E+R R ++ A ++ NADV+ T GA +L
Sbjct: 315 SKLLKAKDKNTKRDIRKELRTLAKEERKR--QQLAVADVIKNADVVLSTLTGASSKKLDG 372
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
I F ++IDE+ QA E C + ++ G + +L GDH QL P + +A + G+ ++LFER
Sbjct: 373 ITFDLVIIDEAAQALEMACWIALLKGPR-CVLAGDHLQLPPTIQSAEAEKKGMGKTLFER 431
Query: 722 LV-VLGIR-PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID-FPWPVPDK 778
L G + L +QYRMH + + S Y ++ + L I+ +
Sbjct: 432 LTEAYGDQITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTE 491
Query: 779 PMLFYV-TQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRA 835
P + + T G EE+ S +N EA+ + G++ IG+ITPY Q
Sbjct: 492 PTIILIDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYAAQVT 551
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
L L +++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NV
Sbjct: 552 CLKMMRNKDTKL-----KDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNV 606
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
A+TRA+ ++ + + +S L+ +++E
Sbjct: 607 AVTRARRQCCLVCDVETVSNDKFLKRLVEYFEE 639
>gi|403214571|emb|CCK69072.1| hypothetical protein KNAG_0B06440 [Kazachstania naganishii CBS 8797]
Length = 2187
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 165/545 (30%), Positives = 257/545 (47%), Gaps = 112/545 (20%)
Query: 484 VDEVLFRCHLPKHFSAP-------NLPDLNRSQVYA-VKHAIQRPLSLIQGPPGTGKTVT 535
VD++L P + +P N LN+SQ A V I+ SLIQGPPGTGKT T
Sbjct: 1269 VDQILLAKPPPAYSLSPEEIEVVKNNYKLNKSQAEAIVNTVIKDGFSLIQGPPGTGKTKT 1328
Query: 536 SATIV-YQLVKQTGSP-----------------------VLVCAPS-------------- 557
I+ Y L + +P +L+CAPS
Sbjct: 1329 ILGIIGYFLSTRRTAPSNVIKIPGEKATLSLEQQLKKQKILICAPSNAAVDEICLRLKSG 1388
Query: 558 ----------------------NIAVDQLT--EKIHRT--------------GLKVVRVC 579
N+A+ LT E + R K
Sbjct: 1389 VYDAHGKLFQPNLVRIGRSDVVNVAIKDLTLEELVERRLSQNSYEFTQNSELDRKFNNAV 1448
Query: 580 AKSREAID-------SPVSFLALHN----QIRNMEMNSELKKLLQLKEETGELSSADEKR 628
K R+ D SPVS L+ + Q+ E++ E+ +L + ++E E +S + +
Sbjct: 1449 TKRRQLRDQLNAEDGSPVSKLSSEDITKLQLEIRELSKEINELGKQRDEIREKNSVNYRS 1508
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVIL 686
+ ++NA+ +L N+++IC T G+ L L I F +++IDE+ Q TE ++P+
Sbjct: 1509 RDLHRRNAQVQILANSNIICSTLSGSAHDVLATLGITFDTVIIDEACQCTELSAIIPLRY 1568
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
G K+ I+VGD QL P V+ A+ +QSLF R+ +P+ L VQYRMHP++S FP
Sbjct: 1569 GGKRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEK-NSQPYLLNVQYRMHPDISSFP 1627
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPV--PDKPMLFY-VTQGQEEIAGSGTSYVNRTE 803
S FY+G L +G +E ++K PW P P F+ + G++E S+ N E
Sbjct: 1628 SKEFYDGKLTDGPGMEE--INK--RPWHSCPPLSPYKFFDIAMGRQEQNLKSMSFTNAEE 1683
Query: 804 ASN----VEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
++ + +F +IG+I+PY Q L ++ I + I+ +
Sbjct: 1684 VRAALKLIDHLFKKFDNTVNFTGKIGIISPYREQ--MLRMRREFTRQFGGSITKYIDFNT 1741
Query: 860 VDAFQGREKDLIIMSCVRSNDHQ-GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
+D FQG+EK++II+SCVR++D + +GFL D RR+NVA TRAK + ++G+ + L K L
Sbjct: 1742 IDGFQGQEKEIIIISCVRADDTKSSVGFLKDFRRMNVAFTRAKTSMWILGHQRSLVKNKL 1801
Query: 919 WNNLL 923
W NL+
Sbjct: 1802 WRNLI 1806
>gi|390960972|ref|YP_006424806.1| DNA helicase [Thermococcus sp. CL1]
gi|390519280|gb|AFL95012.1| DNA helicase [Thermococcus sp. CL1]
Length = 660
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 245/501 (48%), Gaps = 90/501 (17%)
Query: 504 DLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN SQ AV A+ LI GP GTGKT T ++ Q V + G+ VL A SN+AVD
Sbjct: 174 NLNASQRKAVARALGSDDFFLIHGPFGTGKTRTLVELIRQEVAR-GNKVLATAESNVAVD 232
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL------LQLKE 616
L E++ +GLKVVR+ SR + + L I E+ EL++L L K
Sbjct: 233 NLVERLANSGLKVVRIGHPSR--VSKNLHETTLAYLITRHELYGELRELRVIGQNLAEKR 290
Query: 617 ETGELSSADEKR---------------------YRMLKKNAE------------------ 637
+T S +R R++++ AE
Sbjct: 291 DTFTKPSPKYRRGLSDREILRLASKGIGTRGVPARLIREMAEWIKINRQVQKTFDDARKL 350
Query: 638 -----KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLI 692
+ ++ ADV+ T AG + + +IDE+ QAT P ++P I A++ +
Sbjct: 351 EERIAREIIREADVVLTTNSSAGLEVVDYGSYDVAVIDEATQATIPSVLIP-INRARRFV 409
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFFY 751
L GDH QL P ++ +KA G ++LFE L+ + L VQYRM+ L +FPS FY
Sbjct: 410 LAGDHKQLPPTILSEKAKELG--KTLFEGLIERYPEKSEMLTVQYRMNERLMRFPSREFY 467
Query: 752 EGSLQNGVCADE--RKLSKIDFPWPVPD---------KP--MLFYVTQGQEEIAGSGTSY 798
+G ++ ADE R ++ +D PD KP +L ++ + E Y
Sbjct: 468 DGRIE----ADESVRSITLVDLGVESPDEGDVWAEVLKPGNVLVFIDTARRENRFERQRY 523
Query: 799 -----VNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
N EA V + R ++ G++ E IGVITPY+ QR + LP +
Sbjct: 524 GSESRENPLEARLVREAIERLLKLGVRSEWIGVITPYDDQRDLI------SSLLP----E 573
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
E+EV +VD +QGREK++I++S VRSN +GFL D RRLNV+LTRAK +I+IG+ L
Sbjct: 574 EVEVKTVDGYQGREKEVIVLSFVRSNKRGELGFLKDLRRLNVSLTRAKRKLILIGDSSTL 633
Query: 914 SKQPLWNNLLNFYKEQKVLVE 934
S + L+ F +E++ +V+
Sbjct: 634 SAHATYKRLVEFVRERETVVD 654
>gi|429849984|gb|ELA25306.1| DNA-binding protein smubp-2 [Colletotrichum gloeosporioides Nara
gc5]
Length = 665
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 234/469 (49%), Gaps = 71/469 (15%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ Q++K +LVC PSNI+V
Sbjct: 212 PSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQMLK-LDLRILVCGPSNISV 270
Query: 562 DQLTEKIHRTGLKVVR----------VCAKSREAIDSPVSFLALHNQIRNMEMNSE---L 608
D + E++ + ++R V A S + + A+ +R EM+++ +
Sbjct: 271 DNIVERLSPHKIPILRLGHPARLLPSVVAHSLDVLTQTSEAGAIVKDVR-AEMDAKQASI 329
Query: 609 KKLLQLKEET---GELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFH 665
KK +E G+L ++ ++ +L+ + V+ T GAG +L +F
Sbjct: 330 KKTRNGRERRQIYGDLKELRKEFRERERRCV-SNLVRESKVVLATLHGAGGHQLRDQQFD 388
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM-----CKKAARAG------- 713
++IDE+ QA E +C VP +L AK+ + GDH QL P + KK G
Sbjct: 389 VVIIDEASQALEAQCWVP-LLSAKKAVCAGDHLQLPPTIKSLNSKVKKVLVEGAGEKQIK 447
Query: 714 ---LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
L +LF+RL+ L + L QYRMH ++ +FPS+ Y+G L ER L
Sbjct: 448 GMTLETTLFDRLLALHGSSIKRMLTTQYRMHEKIMRFPSDELYDGRLIAAEAVKERLLK- 506
Query: 769 IDFPWPVPD-----KPMLFYVTQG----------------QEEIAGSGTSYVNRTEASNV 807
D P+ V D +P++F TQG + + + G S N EA+ V
Sbjct: 507 -DLPYEVQDTEDTNEPLIFIDTQGGDYPEKSEDDDKDAVKKAKFSLHGESKSNEMEAALV 565
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQ-HMQYQGSLPAKIYQEIEVASVDAFQGR 866
+ + G+KPE I V+TPY Q A L Q+ G IE+ SVD FQGR
Sbjct: 566 RQHAQSLVDAGVKPEDIAVVTPYNAQLAILAPLKEQFPG---------IELGSVDGFQGR 616
Query: 867 EKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
EK+ +I+S VRSN +GFL + RRLNVA+TR K + VIG+ + + +
Sbjct: 617 EKEAVIVSLVRSNSEGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVMR 665
>gi|255711959|ref|XP_002552262.1| KLTH0C00770p [Lachancea thermotolerans]
gi|238933641|emb|CAR21824.1| KLTH0C00770p [Lachancea thermotolerans CBS 6340]
Length = 659
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 252/508 (49%), Gaps = 58/508 (11%)
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL-PKHFSAPNLPDLNRSQ 509
+ ++ RMQ LRK D + LL D +F P N PDLN SQ
Sbjct: 139 TITYKRMQSTLRKLCEFDGVPQNEVIQYLL----DAPVFTSQTQPLKVDFFN-PDLNTSQ 193
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
A++ ++Q +S+I GPPGTGKT T +V+QL + G VLVC PSNIAVD + E++
Sbjct: 194 KKAIEFSLQNRISIIHGPPGTGKTHTVVELVHQLYNK-GQRVLVCGPSNIAVDTILERLA 252
Query: 570 RT--GLKVVRVCAKSR----------EAIDSPVSFLALHNQIRNM--EMNSELKKLLQLK 615
+ G ++R+ +R E + A+ I + + +KKL K
Sbjct: 253 KVMPGESLLRIGHPARLLESNLSHSLEVLSKSGDAGAITKDISKEIDDTIASIKKLKSYK 312
Query: 616 EETGELSSADE--KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------FHSI 667
+ + E K ++ +K L+ +A V+ T G+ L+ F ++
Sbjct: 313 QRKEQWKEVRELRKELKLREKKVISDLVLSARVVVSTLHGSSARELVDCYKHTDHIFDTL 372
Query: 668 LIDESMQATEPECMVPVILGAK----QLILVGDHCQLGPVVMCKKAARA--GLSQSLFER 721
+IDE Q+ EP+C +P+I K +L+L GD QL P + + + L +LF+R
Sbjct: 373 IIDEVSQSLEPQCWIPLIAHYKSDIQKLVLAGDDKQLPPTIKTEDNTKVKNTLGTTLFDR 432
Query: 722 LVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK- 778
LV FR L+ QYRM+ E+ +F S Y+G L+ L +D P ++
Sbjct: 433 LVKKYGDSFRNLLDTQYRMNSEIMEFSSIKMYDGKLKAADSVASWTL--VDLPATECNEN 490
Query: 779 ---PMLFYVTQG-------QEEIAGS-GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVI 827
P+++Y TQ +++ +GS +S N EA T I + E IG+I
Sbjct: 491 TEVPLIWYDTQAGDFPERAEDQDSGSLVSSKYNENEAFLALHHVTSLIDSNVPQECIGII 550
Query: 828 TPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+PY Q AFL + + Q Y +E+++VD FQGREK++II+S VRSND +GFL
Sbjct: 551 SPYNAQVAFLKKTVHPQ-------YPLVEISTVDGFQGREKEVIILSLVRSNDKFEVGFL 603
Query: 888 NDPRRLNVALTRAKYGIIVIGNPKVLSK 915
+D RRLNVA+TR K + VIGN + L +
Sbjct: 604 SDQRRLNVAMTRPKKQLCVIGNMETLER 631
>gi|125806827|ref|XP_699251.2| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein [Danio rerio]
Length = 2781
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 246/520 (47%), Gaps = 74/520 (14%)
Query: 477 HRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTS 536
HR++ + ++ + L + + LP LN SQ A++ A+ ++IQGPPGTGKTV
Sbjct: 2262 HRIVNQSSNQDVPLYLLMREEAPAGLPQLNESQFKALEKALNGKFTIIQGPPGTGKTVVG 2321
Query: 537 ATIVYQLV---------------KQTGSPVLVCAPSNIAVDQLTEKIHRTG--LKVVRVC 579
A IVY K +L C PSN +VD + E + + G LK++RV
Sbjct: 2322 AYIVYWFSQLNSRNLWRLKDPTDKDKREVILYCGPSNKSVDVVAEYLLKFGEKLKLLRVY 2381
Query: 580 AKSREAIDSP--------------------VSFLALHNQIRNMEMNSELKKLL----QLK 615
++ E + P + + LH++IR M N +++ ++K
Sbjct: 2382 SRQMEMQEYPYPGSNLQLSHKSRQERSKPELRAITLHHRIR-MGHNPYSQRITDFDDRIK 2440
Query: 616 EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK-IKFHSILIDESMQ 674
+ L+ D + Y+ L +A L+ D+I CTC A P L K + ILIDE
Sbjct: 2441 SDPYSLTDTDIEEYKKLLNDARLHELERHDIILCTCTAAASPNLKKTLSARQILIDECAM 2500
Query: 675 ATEPECMVPVI-LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE 733
ATEP+ +VP++ ++++L+GDH QL P+V R G+++SLFER + R L+
Sbjct: 2501 ATEPQTLVPLVSFKPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYM---DRAIMLD 2557
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE---- 789
QYRMH E+ KFPS +Y L+ V + + + K +LF +G+E
Sbjct: 2558 TQYRMHEEICKFPSEAYYNDMLKT-VVRERTSVLNAETEGRRQSKRILFGDIRGEEIGLV 2616
Query: 790 --EIAGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGS 846
G+ S N E +I + + G ++PE I +++PY Q A Q +
Sbjct: 2617 VSTARGNENSKANFDEVKKAVEICIQLVTVGRVRPEDIAILSPYNAQVA------QIRER 2670
Query: 847 LPAKIYQEIEVASVDAFQGREKDLIIMSCVRS--NDH-----------QGIGFLNDPRRL 893
L + V ++ QG E +I+S VRS +D + IGF+ D ++
Sbjct: 2671 LSDFELKGFTVTTITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKHIGFVGDENQI 2730
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
NV +TRA+ G+ ++GN VL+ P W LL Y +V
Sbjct: 2731 NVGITRAQVGLCILGNQAVLNCSPAWQKLLKHYSGHGCVV 2770
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 204/478 (42%), Gaps = 95/478 (19%)
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR--------PLSLIQGPPGTGKT 533
HNV C +P + + + LN Q A+ + + PL LI GP GTGKT
Sbjct: 510 HNVLPDFSNCCVPVNLTKQS--QLNNKQQIALNFILGKCEDDKVAAPL-LIYGPFGTGKT 566
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
+ A+ +L ++ + VL+C +N + D +
Sbjct: 567 LCLASAAKELAHRSQNKVLICTYTNSSADLYVRE-------------------------- 600
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETG--ELSSADE--KRYRMLKKNAE------KSLLDN 643
H I N KLL++K G + + D+ ++Y + ++ + +S L++
Sbjct: 601 HFHPYIIN---GHPTLKLLRIKANKGGSAIIATDDITRKYCLCSRDGQSFILPARSDLES 657
Query: 644 ADVICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK--QLILVGDHC 698
+I T A LK+ F ILIDE+ Q E E ++ + L K +++L GDH
Sbjct: 658 HRIIITTTSIARHLHELKLPKGFFTHILIDEASQMLEGEALMALGLADKHTRVVLAGDHM 717
Query: 699 QLGP---VVMCKKAARAGLSQSLF-----ERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
Q+ P V K + L LF + + + YR E+ F S +F
Sbjct: 718 QMAPKLFSVTDDKRSEHTLLNRLFHYYQDQSINIAKKSRIIFNENYRSTTEIVDFVSTYF 777
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS--GTSYVNRTEASNVE 808
Y +D K P P KP++F+ +G+ ++ + TS++N E ++V
Sbjct: 778 Y--------VSDGIKARGDVHPHPRL-KPLIFHHVRGECHLSSTITSTSWLNYAEVNSVV 828
Query: 809 KITTRFI-----RCGMK-PEQIGVITPYEGQRAFLVQ-HMQYQGSLPAKIYQEIEVASVD 861
+ + G K P+QI V++ EGQ+ ++ H++ +G + + V ++
Sbjct: 829 NMVQVLLTDWPMEWGDKDPKQICVLS--EGQQVAAIRIHLRRKG------FYGVSVQNLA 880
Query: 862 AFQGREKDLIIMSCVRSNDH------QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
QG++ +II++ V + D F +D R LN ALTRA+ ++VIG+ L
Sbjct: 881 NIQGKQFRVIIITTVHTRDKLLQLDSSCPEFFDDIRALNTALTRAQSLVVVIGDAGAL 938
>gi|297737213|emb|CBI26414.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 291/622 (46%), Gaps = 84/622 (13%)
Query: 369 VGLNKKSIAYFSLAKTDGDMRL-----MQGDELKLRY--SYDASKTWSGLGHVIKIPDNF 421
+GL + F K +G+ RL GD + +R S A T G V + +
Sbjct: 161 IGLGGMHLVLF---KVEGNHRLPPTTLSPGDMVCVRICDSRGAGATSCMQGFVDSLGKD- 216
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAV 466
G + + L+S G PT FS F KS DR+ + L+K +
Sbjct: 217 GCSISVALESRHGDPT-----FSKLF-GKSVRIDRIHGLADALTYERNCEALMLLQKNGL 270
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY--AVKHAI------Q 518
++ S + L G D + ++ L +L S Y + + AI +
Sbjct: 271 QKKNPSIAVVATLFGDKEDVAWLEENDLVDWAEVGLDELLESGAYDDSQRRAIALGLNKK 330
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RP+ +IQGPPGTGKTV ++ V+Q G VLV AP+N AVD + EK+ G+ +VRV
Sbjct: 331 RPILIIQGPPGTGKTVLLKELIALAVQQ-GERVLVTAPTNAAVDNMVEKLSNIGVNIVRV 389
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEM----------NSELKKLLQLKEETGELSSADEKR 628
+R I S V+ +L +I N ++ S+L+K L+ + L++ +
Sbjct: 390 GNPAR--ISSAVASKSL-GEIVNSKLENFLTEFERKKSDLRKDLRHCLKDDSLAAGIRQL 446
Query: 629 YRMLKK-------NAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPEC 680
+ L K K +L +A V+ T GA DP + ++ F ++IDE+ QA EP C
Sbjct: 447 LKQLGKALKKKEKETVKEVLSSAQVVLATNTGAADPVIRRLDAFDLVIIDEAGQAIEPSC 506
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG--IRPFRLEVQYRM 738
+P++ G K+ I+ GD CQL PV++ +KA GL SL ER L + +L QYRM
Sbjct: 507 WIPILQG-KRCIIAGDQCQLAPVILSRKALEGGLGVSLLERAATLHEEVLATKLTTQYRM 565
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP--VPDKPMLFYVTQ--------GQ 788
+ ++ + S Y GSL++ L F P + P+L T+ G
Sbjct: 566 NDAIASWASKEMYGGSLKSSSSVFSHLLVDSPFVKPAWITQCPLLLLDTRMPYGSLSVGC 625
Query: 789 EE---IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
EE AG+G+ Y N EA V + I G+ P I V +PY Q L +
Sbjct: 626 EEHLDPAGTGSFY-NEGEADIVVQHVLSLISAGVSPTAIAVQSPYVAQVQLLRDRLD--- 681
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
+P + +EVA++D+FQGRE D +I+S VRSN +GFL D RR+NVA+TRA+ +
Sbjct: 682 EIPEAV--GVEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRARKHVA 739
Query: 906 VIGNPKVLSKQPLWNNLLNFYK 927
V+ + + LL +
Sbjct: 740 VVCDSSTICHNTFLARLLRHIR 761
>gi|18395518|ref|NP_565299.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|15027927|gb|AAK76494.1| putative helicase [Arabidopsis thaliana]
gi|20197343|gb|AAM15033.1| putative helicase [Arabidopsis thaliana]
gi|20197741|gb|AAD17447.2| putative helicase [Arabidopsis thaliana]
gi|20259169|gb|AAM14300.1| putative helicase [Arabidopsis thaliana]
gi|330250587|gb|AEC05681.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 639
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 233/465 (50%), Gaps = 47/465 (10%)
Query: 495 KHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
K F+ N +L++SQ A+ A+ + + L+ GPPGTGKT T IV Q VK+ GS +L
Sbjct: 181 KSFTPFN-KNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKR-GSKILA 238
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNME 603
CA SNIAVD + E++ +K+VRV +R A+D+ V L N IR E
Sbjct: 239 CAASNIAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRK-E 297
Query: 604 MNSELKKLLQLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
M + KLL+ K+ E L + KR ++ A ++ NADVI T GA
Sbjct: 298 MKALNGKLLKAKDKNTRRLIQKELRTLGKEERKRQQL----AVSDVIKNADVILTTLTGA 353
Query: 655 GDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
+L F ++IDE QA E C + ++ G++ IL GDH QL P + +A R GL
Sbjct: 354 LTRKLDNRTFDLVIIDEGAQALEVACWIALLKGSR-CILAGDHLQLPPTIQSAEAERKGL 412
Query: 715 SQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
++LFERL L + L VQYRMH + + S Y+ N + A S + F
Sbjct: 413 GRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSKELYD----NKITAHSSVASHMLFD 468
Query: 773 W------PVPDKPMLFYVTQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
+ +L T G EE S N EA R + G++P I
Sbjct: 469 LENVTKSSSTEATLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDI 528
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+ITPY Q L + L +++E+++VD FQGREK+ II+S VRSN + +
Sbjct: 529 GIITPYAAQVMLLRILRGKEEKL-----KDMEISTVDGFQGREKEAIIISMVRSNSKKEV 583
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
GFL D RR+NVA+TR++ ++ + + +S ++ +++E
Sbjct: 584 GFLKDQRRMNVAVTRSRRQCCIVCDTETVSSDAFLKRMIEYFEEH 628
>gi|225441756|ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
Length = 647
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 229/451 (50%), Gaps = 38/451 (8%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+L+RSQ A+ A+ + + L+ GPPGTGKT T I+ Q VK+ G+ +L CA SNIAVD
Sbjct: 196 NLDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKR-GAKILACAASNIAVD 254
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNMEMNSELKKLL 612
+ E++ +K+VR+ +R A+D+ V L N IR EM + KLL
Sbjct: 255 NIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRK-EMKALNGKLL 313
Query: 613 QLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ K+ E LS + KR ++ A ++ NA+V+ T GA +L I
Sbjct: 314 KTKDKNTRRDIRKELKTLSKEERKRQQL----AVTDVIKNANVVLTTLTGAVSRKLENIS 369
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA E C + ++ G++ IL GDH QL P + +A + GL ++LFERL
Sbjct: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLA 428
Query: 724 VL-GIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID--FPWPVPDKP 779
L G L VQYRMH + + S Y + LS ++ +
Sbjct: 429 DLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSSSTEST 488
Query: 780 MLFYVTQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
+L T G EE S +N EA R + G++ IG+ITPY Q L
Sbjct: 489 LLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVVLL 548
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
L +++E+++VD FQGREK+ II+S RSN + +GFL+D RR+NVA+
Sbjct: 549 KMMKNNDDKL-----KDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAV 603
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
TRA+ ++ + + ++ L+ +++E
Sbjct: 604 TRARRQCCLVCDTETVTSDKFLKRLIEYFEE 634
>gi|11191231|emb|CAC16347.1| putative helicase [Arabidopsis thaliana]
Length = 635
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/465 (33%), Positives = 233/465 (50%), Gaps = 47/465 (10%)
Query: 495 KHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
K F+ N +L++SQ A+ A+ + + L+ GPPGTGKT T IV Q VK+ GS +L
Sbjct: 177 KSFTPFN-KNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKR-GSKILA 234
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNME 603
CA SNIAVD + E++ +K+VRV +R A+D+ V L N IR E
Sbjct: 235 CAASNIAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRK-E 293
Query: 604 MNSELKKLLQLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
M + KLL+ K+ E L + KR ++ A ++ NADVI T GA
Sbjct: 294 MKALNGKLLKAKDKNTRRLIQKELRTLGKEERKRQQL----AVSDVIKNADVILTTLTGA 349
Query: 655 GDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGL 714
+L F ++IDE QA E C + ++ G++ IL GDH QL P + +A R GL
Sbjct: 350 LTRKLDNRTFDLVIIDEGAQALEVACWIALLKGSR-CILAGDHLQLPPTIQSAEAERKGL 408
Query: 715 SQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
++LFERL L + L VQYRMH + + S Y+ N + A S + F
Sbjct: 409 GRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSKELYD----NKITAHSSVASHMLFD 464
Query: 773 W------PVPDKPMLFYVTQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
+ +L T G EE S N EA R + G++P I
Sbjct: 465 LENVTKSSSTEATLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDI 524
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+ITPY Q L + L +++E+++VD FQGREK+ II+S VRSN + +
Sbjct: 525 GIITPYAAQVMLLRILRGKEEKL-----KDMEISTVDGFQGREKEAIIISMVRSNSKKEV 579
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
GFL D RR+NVA+TR++ ++ + + +S ++ +++E
Sbjct: 580 GFLKDQRRMNVAVTRSRRQCCIVCDTETVSSDAFLKRMIEYFEEH 624
>gi|342873257|gb|EGU75464.1| hypothetical protein FOXB_14012 [Fusarium oxysporum Fo5176]
Length = 2080
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 168/552 (30%), Positives = 251/552 (45%), Gaps = 110/552 (19%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQ----------------- 546
LNR Q AV A +LIQGPPGTGKT T +V L+ +
Sbjct: 1338 LNRGQATAVLGAHDNDGFTLIQGPPGTGKTKTIVAMVGTLLSEQLSQSGNQGIPVGVPLR 1397
Query: 547 -TGSP----------VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKS--------REAID 587
G+P +LVCAPSN AVD+L ++ + G+K + K+ +AI+
Sbjct: 1398 PNGAPGAPKQNRSKKLLVCAPSNAAVDELVLRL-KAGVKTISGKTKNINVLRLGRSDAIN 1456
Query: 588 SPVSFLALHNQIR-NMEMNSELKKLL-----------QLKEETGELSSA----------- 624
+ V + L ++ ME + K ++KEE G+L
Sbjct: 1457 AAVRDVTLDELVKARMEGDQTKDKAKADRDQLHENAGKVKEELGKLRPQLEAAKLMDDRT 1516
Query: 625 ---------DEKRYR-----------------------MLKKNAEKSLLDNADVICCTCV 652
DE + R M ++ ++ +L+NA V+C T
Sbjct: 1517 LYNKLSREFDELKRRQMSYGKQIDADKSSGNSVAREMEMRRRQVQQEILNNAQVLCATLS 1576
Query: 653 GAGDP---RLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKA 709
G+G L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + A
Sbjct: 1577 GSGHEMFRNLEDVEFETVIIDEAAQCVELSALIPLKYGCYKCILVGDPKQLPPTVLSQSA 1636
Query: 710 ARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
A+ G QSLF R+ R L ++QYRMHPE+S FPS FYEG L +G E +
Sbjct: 1637 AKFGYDQSLFVRMQQNHPRSVHLLDMQYRMHPEISLFPSREFYEGQLADGQNMHELRQQ- 1695
Query: 769 IDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI----RCGMKPE 822
PW P F+ QG +E G S VN E ++ RF C +
Sbjct: 1696 ---PWHKSALLGPYRFFDVQGVQERGHKGQSLVNTKELDVAIQMYDRFSNEYRECDLT-G 1751
Query: 823 QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
+IG+ITPY+ Q L +++ I IE + DAFQGRE ++II SCVR++
Sbjct: 1752 KIGIITPYKAQLYEL--RNRFRSRYGENITSIIEFNTTDAFQGRECEIIIFSCVRASSTG 1809
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKE 942
GIGF+ D RR+NV LTRAK + ++G+ + L + W L+ + + G + ++
Sbjct: 1810 GIGFMTDIRRMNVGLTRAKSSLWILGDSRALVQGEFWRKLIEDAQARDRYTNGDVLSMFR 1869
Query: 943 SLILFSKPKQYF 954
+ +KP Y
Sbjct: 1870 KPLEKAKPGAYL 1881
>gi|222424984|dbj|BAH20441.1| PPAR gamma-DNA-binding domain interacting protein1 [Mus musculus]
Length = 2947
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 236/497 (47%), Gaps = 77/497 (15%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK----------------QTG 548
LN+SQ AV+ A+Q+ ++IQGPPGTGKTV IVY + Q G
Sbjct: 2449 LNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQLG 2508
Query: 549 SP-VLVCAPSNIAVDQLTEKIHR--TGLKVVRVCAKSREAIDSPVS-------------- 591
P VL C PSN +VD L + R T +K +RV + EA + P+
Sbjct: 2509 GPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQE 2568
Query: 592 --------FLALHNQIRNME--MNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
+ LH++IR +E++K E S D + YR + A K L
Sbjct: 2569 GRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLRVYRRVLGKARKHEL 2628
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK---QLILVGDHC 698
+ VI CTC A L + ILIDE+ ATEPE ++P++ +K +++L+GDH
Sbjct: 2629 ERHSVILCTCCCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGDHK 2688
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QL PVV ++ G+ +SLFER I L+ QYRMH ++ FPS FY G L+
Sbjct: 2689 QLRPVVKSEQLQSLGMDRSLFERYHRDAI---MLDTQYRMHKDICSFPSVEFYGGKLKTW 2745
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT--TRFIR 816
+D R+L I P ++F QG E+ T N +N E++T R I+
Sbjct: 2746 --SDLRRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRIIK 2803
Query: 817 C-----GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
+ P+ I V+TPY Q A + + + +G + V S+ QG E +
Sbjct: 2804 QLTLDRTVDPKDIAVLTPYNAQAAAISRGLMQRG------VTGVTVTSITKSQGSEWRYV 2857
Query: 872 IMSCVRSNDHQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
I+S VR+ + GF+ DP ++NVA+TRA+ + +IG+ +L PL
Sbjct: 2858 IVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCCPL 2917
Query: 919 WNNLLNFYKEQKVLVEG 935
W+ LL+F + Q LV
Sbjct: 2918 WHRLLDFCEAQHSLVSA 2934
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 183/480 (38%), Gaps = 70/480 (14%)
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR--------PLSLIQGPPGTGKT 533
H V L C LP + P N Q AV R P LI GP GTGKT
Sbjct: 738 HLVVPDLPACTLPHPWPTPPSFRGNHKQKLAVGLIAGRRPEGTKHIPPLLIYGPFGTGKT 797
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
T A ++V+Q + VL+C +N A D RE VS
Sbjct: 798 YTLAMAALEVVQQPHTKVLICTHTNSAADIYI-----------------REYFHDYVS-- 838
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
+ H + + + + Q T + E R + + L+ + V+ T
Sbjct: 839 SGHPEATPLRVMYADRPPRQTDPTTLQYCCLTEDR-QAFRPPTGPELVHHRLVVTTT--- 894
Query: 654 AGDPRLLKIK---FHSILIDESMQATEPECMVPV--ILGAKQLILVGDHCQLGPVVMC-- 706
R L++ F I IDE+ Q E E ++P+ L +++L GDH Q+ P +
Sbjct: 895 -SQARELQVPAGFFSHIFIDEAAQMLECEALIPLSYALSLTRVVLAGDHMQVAPRLFSVP 953
Query: 707 -KKAARAGLSQSLF-----ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
K+AR L LF E + YR + F S+ FY N +
Sbjct: 954 RDKSARHTLLHRLFLYYQQEAHKIAQQSRIIFHENYRSTAAIINFVSHHFYLAK-GNPIQ 1012
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIR 816
A + P P++F G E S TS++N E + V +I +
Sbjct: 1013 ASGK------VPRHPQHYPLMFCHVAGSPEQDMSMTSWLNSAEVTQVVEKVREIYNTWPH 1066
Query: 817 CGMKPEQIGVITPYEG-QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
C EQ + G Q + L Q ++ + E+ V S + GRE ++++S
Sbjct: 1067 CWGPREQRHICAVSHGAQVSALRQELRRRN------LGEVSVGSFEILPGREFRVVVLSS 1120
Query: 876 VRS-NDHQGIG-----FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL-NFYKE 928
V + N G F +PR LN +TRA+ ++ +G+ L NL +F +E
Sbjct: 1121 VHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGACRNLWRSFIRE 1180
>gi|297739693|emb|CBI29875.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 149/451 (33%), Positives = 229/451 (50%), Gaps = 38/451 (8%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+L+RSQ A+ A+ + + L+ GPPGTGKT T I+ Q VK+ G+ +L CA SNIAVD
Sbjct: 196 NLDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKR-GAKILACAASNIAVD 254
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNMEMNSELKKLL 612
+ E++ +K+VR+ +R A+D+ V L N IR EM + KLL
Sbjct: 255 NIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRK-EMKALNGKLL 313
Query: 613 QLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ K+ E LS + KR ++ A ++ NA+V+ T GA +L I
Sbjct: 314 KTKDKNTRRDIRKELKTLSKEERKRQQL----AVTDVIKNANVVLTTLTGAVSRKLENIS 369
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA E C + ++ G++ IL GDH QL P + +A + GL ++LFERL
Sbjct: 370 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLA 428
Query: 724 VL-GIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID--FPWPVPDKP 779
L G L VQYRMH + + S Y + LS ++ +
Sbjct: 429 DLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSSSTEST 488
Query: 780 MLFYVTQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
+L T G EE S +N EA R + G++ IG+ITPY Q L
Sbjct: 489 LLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVVLL 548
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
L +++E+++VD FQGREK+ II+S RSN + +GFL+D RR+NVA+
Sbjct: 549 KMMKNNDDKL-----KDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAV 603
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
TRA+ ++ + + ++ L+ +++E
Sbjct: 604 TRARRQCCLVCDTETVTSDKFLKRLIEYFEE 634
>gi|409076102|gb|EKM76476.1| hypothetical protein AGABI1DRAFT_131302 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 892
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 218/440 (49%), Gaps = 75/440 (17%)
Query: 523 LIQGPPGTGKTVTSATIVYQLVKQT-GSPVLVCAPSNIAVDQLTEKIHRTGLKVV-RVCA 580
++ GPPGTGKTVT + Q++ S +L CAPSN A D LT+K+ VV R+ A
Sbjct: 401 IVFGPPGTGKTVTLVEAMQQIITANPDSRILACAPSNSAADTLTQKLMHLAPSVVFRLNA 460
Query: 581 KSREAIDSPVSF--LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
RE D+P + L N R + EL++L +YR
Sbjct: 461 LVREVKDTPTTIHPFCLINGNRVFAI-PELEQL---------------AKYR-------- 496
Query: 639 SLLDNADVICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPV--ILGA-KQLI 692
++ TC+ P L +K F I IDE+ Q EPE MVP+ I G ++
Sbjct: 497 -------IVVSTCLSGSVPASLGLKRGHFTHIFIDEAGQGKEPEVMVPIKSIAGKDTNVV 549
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL---------------GIRPFRLEVQYR 737
L GD+ QLGP+V A LSQS RL+ L G+ +L +R
Sbjct: 550 LAGDNQQLGPIVNSGTARLLKLSQSYLARLMTLPIYNIEGEDSNPGGRGVTIAKLVKNFR 609
Query: 738 MHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLFYVTQGQEEIAGSG 795
HP + +FP+ FY L++ C D + ++ VP K P++F+ G+++
Sbjct: 610 SHPAILEFPNTQFYNSELRS--CGDNALVRSLENWEEVPTKGFPIIFHGVVGKDQQEKRS 667
Query: 796 TSYVNRTEASNVEKITTRFI---RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
S+ N EA V K + + G++ + IGVITPY GQR + Q + L
Sbjct: 668 PSFFNPDEAILVSKYCLSLVNDRKKGVRAQDIGVITPYHGQRIKIKQLLDKDRKL----- 722
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDH-------QGIGFLNDPRRLNVALTRAKYGII 905
++I V SV+ FQG+E+ +IIMS VRSN+H + +GF+ D RR NVA+TRA+ +I
Sbjct: 723 EDITVGSVEQFQGQERRVIIMSTVRSNEHYVTADIRRSLGFVADRRRFNVAVTRAQALLI 782
Query: 906 VIGNPKVLSKQPLWNNLLNF 925
VIGNP +LS PLW +N+
Sbjct: 783 VIGNPILLSLDPLWRGFMNY 802
>gi|426194445|gb|EKV44376.1| hypothetical protein AGABI2DRAFT_120505 [Agaricus bisporus var.
bisporus H97]
Length = 892
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 152/442 (34%), Positives = 220/442 (49%), Gaps = 79/442 (17%)
Query: 523 LIQGPPGTGKTVTSATIVYQLVKQTGSP---VLVCAPSNIAVDQLTEKIHRTGLKVV-RV 578
++ GPPGTGKTVT + Q++ T +P +L CAPSN A D LT+K+ VV R+
Sbjct: 401 IVFGPPGTGKTVTLVEAMQQII--TANPESRILACAPSNSAADTLTQKLMHLAPSVVFRL 458
Query: 579 CAKSREAIDSPVSF--LALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNA 636
A RE D+P + L N R + EL++L +YR
Sbjct: 459 NALVREVKDTPTTIHPFCLINGNRVFAI-PELEQL---------------AKYR------ 496
Query: 637 EKSLLDNADVICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPV--ILGA-KQ 690
++ TC+ P L +K F I IDE+ Q EPE MVP+ I G
Sbjct: 497 ---------IVVSTCLSGSVPASLGLKRGHFTHIFIDEAGQGKEPEVMVPIKSIAGKDTN 547
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL---------------GIRPFRLEVQ 735
++L GD+ QLGP+V A LSQS RL+ L G+ +L
Sbjct: 548 VVLAGDNQQLGPIVNSGTARLLKLSQSYLARLMTLPLYNIEGEDSNPGGRGVTIAKLVKN 607
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLFYVTQGQEEIAG 793
+R HP + +FP+ FY L++ C D + ++ VP K P++F+ G+++
Sbjct: 608 FRSHPAILQFPNTQFYNSELRS--CGDNALVRSLENWEEVPTKGFPIIFHGVVGKDQQEK 665
Query: 794 SGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
S+ N EA V K + + G++ + IGVITPY GQR + Q + L
Sbjct: 666 RSPSFFNPDEAILVSKYCLSLVNDRKKGVRAQDIGVITPYHGQRIKIKQLLDKDRKL--- 722
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDH-------QGIGFLNDPRRLNVALTRAKYG 903
++I V SV+ FQG+E+ +IIMS VRSN+H + +GF+ D RR NVA+TRA+
Sbjct: 723 --EDITVGSVEQFQGQERRVIIMSTVRSNEHYVTADIRRSLGFVADRRRFNVAVTRAQAL 780
Query: 904 IIVIGNPKVLSKQPLWNNLLNF 925
+IVIGNP +LS PLW +N+
Sbjct: 781 LIVIGNPILLSLDPLWRGFMNY 802
>gi|388851768|emb|CCF54574.1| related to SEN1 protein [Ustilago hordei]
Length = 900
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 239/505 (47%), Gaps = 101/505 (20%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSP------------------VLVCAPSNIAVD 562
SLIQGPPGTGKT T ++ V + P +L+CAPSN A+D
Sbjct: 269 FSLIQGPPGTGKTKTICALIGAFVSRQKGPSTSVQAGQAQGKVDATKKILLCAPSNAAID 328
Query: 563 QLTEK------------IHRTGLKVVRVCAKSREAIDSPVSFL----------------- 593
++ ++ IH ++V R A + D + +L
Sbjct: 329 EVAKRARASIRLLDGKVIHPKVVRVGREEAVNVSVKDISLEYLVEQRLKADGVFDGNRNI 388
Query: 594 -------ALHNQIRNMEMNSELKK--------------LLQLKEETGELSS--------- 623
ALH +I +++M + K+ QLK E LS+
Sbjct: 389 VTAADLSALHAEIHHLKMQRKQKQNKLSQARRSGDKALATQLKAEIRNLSANVKSKFDEA 448
Query: 624 -----ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF--HSILIDESMQAT 676
+ ++ L++ A +L ADVIC T GAG L ++ F +++IDE+ QA
Sbjct: 449 KGKQKSQHRQLEALRRRARLEILGEADVICTTLSGAGHKMLSRVAFDFETVVIDEAAQAV 508
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQ 735
E ++P+ G KQ I+VGD QL P V+ ++A + G SQSLF R+ + L +Q
Sbjct: 509 ELSTIIPLRYGCKQCIMVGDPNQLPPTVISQQADKLGYSQSLFARMFERAPQEVHLLSIQ 568
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--KPMLFYVTQGQEEIAG 793
YRMHPE+S FP+ FY LQ+G E PW + +P F T+ E G
Sbjct: 569 YRMHPEISLFPAKAFYGSKLQDGPDMAE----STHQPWHRYELTRPFKFLSTKAPES-PG 623
Query: 794 SGTSYVNRTEASNVEKITTRFIRCGMKPE----QIGVITPYEGQRAFLVQHMQYQGSLPA 849
S +N+ EA+ + R +R E +IG++T Y+ Q L Q +Q
Sbjct: 624 PFHSIINKEEANVALALYGR-LRTDHAQENFDYRIGIVTMYKAQVFELKQ--TFQQRYGK 680
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRS-NDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
I + I+ +VD FQG+EKD+II+SCVRS IGFL D RRLNVA+TRAK + +IG
Sbjct: 681 DIVERIDFNTVDGFQGQEKDIIILSCVRSLPKPSSIGFLRDGRRLNVAVTRAKSNLFIIG 740
Query: 909 NPKVLSK-QPLWNNLLNFYKEQKVL 932
N + L + +W +L+ ++++ +
Sbjct: 741 NAEHLRRGDAIWESLVAAAEQREAV 765
>gi|125347767|ref|NP_898985.2| PPAR gamma-DNA-binding domain interacting protein1 [Mus musculus]
Length = 2947
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 236/497 (47%), Gaps = 77/497 (15%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK----------------QTG 548
LN+SQ AV+ A+Q+ ++IQGPPGTGKTV IVY + Q G
Sbjct: 2449 LNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQLG 2508
Query: 549 SP-VLVCAPSNIAVDQLTEKIHR--TGLKVVRVCAKSREAIDSPVS-------------- 591
P VL C PSN +VD L + R T +K +RV + EA + P+
Sbjct: 2509 GPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQE 2568
Query: 592 --------FLALHNQIRNME--MNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
+ LH++IR +E++K E S D + YR + A K L
Sbjct: 2569 GRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLRVYRRVLGKARKHEL 2628
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK---QLILVGDHC 698
+ VI CTC A L + ILIDE+ ATEPE ++P++ +K +++L+GDH
Sbjct: 2629 ERHSVILCTCSCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGDHK 2688
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QL PVV ++ G+ +SLFER I L+ QYRMH ++ FPS FY G L+
Sbjct: 2689 QLRPVVKSEQLQSLGMDRSLFERYHRDAI---MLDTQYRMHKDICSFPSVEFYGGKLKTW 2745
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT--TRFIR 816
+D R+L I P ++F QG E+ T N +N E++T R I+
Sbjct: 2746 --SDLRRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRIIK 2803
Query: 817 C-----GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
+ P+ I V+TPY Q A + + + +G + V S+ QG E +
Sbjct: 2804 QLTLDRTVDPKDIAVLTPYNAQAAAISRGLMQRG------VTGVTVTSITKSQGSEWRYV 2857
Query: 872 IMSCVRSNDHQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
I+S VR+ + GF+ DP ++NVA+TRA+ + +IG+ +L PL
Sbjct: 2858 IVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCCPL 2917
Query: 919 WNNLLNFYKEQKVLVEG 935
W+ LL+F + Q LV
Sbjct: 2918 WHRLLDFCEAQHSLVSA 2934
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 183/480 (38%), Gaps = 70/480 (14%)
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR--------PLSLIQGPPGTGKT 533
H V L C LP + P N Q AV R P LI GP GTGKT
Sbjct: 738 HLVVPDLPACTLPHPWPTPPSFRGNHKQKLAVGLIAGRRPEGTKHIPPLLIYGPFGTGKT 797
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFL 593
T A ++V+Q + VL+C +N A D RE VS
Sbjct: 798 YTLAMAALEVVQQPHTKVLICTHTNSAADIYI-----------------REYFHDYVS-- 838
Query: 594 ALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVG 653
+ H + + + + Q T + E R + + L+ + V+ T
Sbjct: 839 SGHPEATPLRVMYADRPPRQTDPTTLQYCCLTEDR-QAFRPPTGPELVHHRLVVTTT--- 894
Query: 654 AGDPRLLKIK---FHSILIDESMQATEPECMVPV--ILGAKQLILVGDHCQLGPVVMC-- 706
R L++ F I IDE+ Q E E ++P+ L +++L GDH Q+ P +
Sbjct: 895 -SQARELQVPAGFFSHIFIDEAAQMLECEALIPLSYALSLTRVVLAGDHMQVTPRLFSVP 953
Query: 707 -KKAARAGLSQSLF-----ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
K+AR L LF E + YR + F S+ FY N +
Sbjct: 954 RDKSARHTLLHRLFLYYQQEAHKIAQQSRIIFHENYRSTAAIINFVSHHFYLAK-GNPIQ 1012
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIR 816
A + P P++F G E S TS++N E + V +I +
Sbjct: 1013 ASGK------VPRHPQHYPLMFCHVAGSPEQDMSMTSWLNSAEVTQVVEKVREIYNTWPH 1066
Query: 817 CGMKPEQIGVITPYEG-QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
C EQ + G Q + L Q ++ + E+ V S + GRE ++++S
Sbjct: 1067 CWGPREQRHICAVSHGAQVSALRQELRRRN------LGEVSVGSFEILPGREFRVVVLSS 1120
Query: 876 VRS-NDHQGIG-----FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL-NFYKE 928
V + N G F +PR LN +TRA+ ++ +G+ L NL +F +E
Sbjct: 1121 VHNRNSLLSPGAPTSEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGACRNLWRSFIRE 1180
>gi|299743534|ref|XP_001835836.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
gi|298405699|gb|EAU85901.2| helicase sen1 [Coprinopsis cinerea okayama7#130]
Length = 1960
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 247/525 (47%), Gaps = 112/525 (21%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPV------------ 551
+N Q A+ A+ LIQGPPGTGKT T +V + + + P+
Sbjct: 1289 INEPQATAIIGAMASTGFVLIQGPPGTGKTSTICALVARFMSRRAIPITAPGSKEVPAKP 1348
Query: 552 --LVCAPSNIAVDQLTEKIHRT--------GLKVVRVCAKSREAIDSPVSFLALHNQIRN 601
L+CAPSN A+D++ +++ L +VR+ A+ +I S V ++L + +++
Sbjct: 1349 KILICAPSNAAIDEIAQRLKAKYCDGDPVKKLSIVRMGAQG--SIGSAVKGVSLDSLVQD 1406
Query: 602 ------------------------MEMNS-------ELKKLLQLKEETGELSSADEKRYR 630
MEM S +LK++ L+ ++ D++
Sbjct: 1407 KIQEETGNQGFPTEELNRQISMLKMEMESLKHARDEKLKEMTNLQNNYARHNALDQETQA 1466
Query: 631 M---------------------------LKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
M L++ A ++ +ADVIC T G+G LL
Sbjct: 1467 MGRKRQALAAELNKLRDKLKSDGRSMEALRRKARFEIIRDADVICSTLSGSGHEALLDQT 1526
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA E ++P+ +K+ I+VGD QL P V+ ++AA QSLF+R
Sbjct: 1527 FEMVIIDEAAQAVELSSLIPLKYESKRCIMVGDPQQLPPTVISQQAASKKYDQSLFQRFF 1586
Query: 724 VLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW---PVPDKP 779
+ L +QYRMHPE+S+FPS FY +Q+G E PW P+
Sbjct: 1587 KKSPKAVHLLSIQYRMHPEISRFPSKAFYNDRIQDGPNMKELTAR----PWHAEPLLGIY 1642
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTE----ASNVEKITTRFIRCGMKPEQIGVITPYEGQ-- 833
+F V EE G S NR E + +++T+F G++ +IG+++PY Q
Sbjct: 1643 KIFNVNGNAEE--GPQNSLKNRAEVEVATALYRRLSTQFREFGLE-RKIGIVSPYRAQIK 1699
Query: 834 ---RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH-QGIGFLND 889
R+F Q + EI+ +VD FQG+EKD+II+SCVR + IGF+ D
Sbjct: 1700 ELERSFFQAFGQ-------SVLDEIDFNTVDGFQGQEKDIIILSCVRGGPGVKSIGFMAD 1752
Query: 890 PRRLNVALTRAKYGIIVIGN-PKVLSKQPLWNNLLNFYKEQKVLV 933
RRLNVA+TRAK + ++GN P + + +W + +E+ ++V
Sbjct: 1753 VRRLNVAITRAKSALFILGNVPTLERSESIWKQAIADARERNLIV 1797
>gi|164658495|ref|XP_001730373.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
gi|159104268|gb|EDP43159.1| hypothetical protein MGL_2755 [Malassezia globosa CBS 7966]
Length = 1900
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 240/514 (46%), Gaps = 93/514 (18%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV----------KQTGSP-- 550
+LN Q AV ++ P SLIQGPPGTGKT T +V + K+ +P
Sbjct: 1151 ELNEPQARAVVATMRTPGFSLIQGPPGTGKTKTIRALVASFLSRRAGTSVGPKKAAAPAR 1210
Query: 551 ------VLVCAPSNIAVDQLTEKI--------HRTGLKVVRV------------------ 578
+L+CAPSN A+D+L +I R ++VR+
Sbjct: 1211 DGPSARMLLCAPSNAAIDELVSRIKDGVDIDGKRVVPRLVRLGRDEAVNPAVRDVTLDAL 1270
Query: 579 --------CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET----GELSSADE 626
A SR A + A ++ +E ++ +E T EL+ +
Sbjct: 1271 AEHAGSKDTAASRAAEELQRVERAWRDKRAELEQSASAPTSSTSRERTRALQAELNELTD 1330
Query: 627 KRYRML--------------------KKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHS 666
KR+ + + A S+LD A+++C T GAG L + F +
Sbjct: 1331 KRFELREQVSSLQSRSKMGSMRPETERHMARMSILDEAEIVCATLAGAGHEMLYRYTFDT 1390
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG 726
++IDE+ QA E ++P+ + ILVGD QL P V+ ++A R +QSLF R+
Sbjct: 1391 VVIDEAAQAVELSTLIPLRYECTRCILVGDPKQLPPTVLSQEAERRQYAQSLFVRM--FN 1448
Query: 727 IRPFR---LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD--KPML 781
P R L +QYRMHP++S FPS FY L +G + SK PW P
Sbjct: 1449 ASPDRVHLLSIQYRMHPDISLFPSTAFYGRQLIDG----PQMASKTLQPWHNTQLFGPFR 1504
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKP--EQIGVITPYEGQRAFLVQ 839
F+ EE G S N++EA ++ C ++G ++ Y+ Q L
Sbjct: 1505 FFHVDALEE-PGRSHSIQNQSEAYTAMQVYEALCACAQTSLRGRVGFVSMYKAQVDLLRT 1563
Query: 840 HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTR 899
Q A + +++ +SVD FQG+EKD+II+SCVRSN + +GFL+D RRLNVALTR
Sbjct: 1564 LFVSQYGRAAAM--DVDFSSVDGFQGQEKDIIILSCVRSNKDRVMGFLSDHRRLNVALTR 1621
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
A+ +IVIGN +L +W ++++ + + +V
Sbjct: 1622 ARSNMIVIGNASMLGNDTIWRDMISEARSRGFVV 1655
>gi|294893946|ref|XP_002774696.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239880149|gb|EER06512.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 375
Score = 203 bits (516), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 177/315 (56%), Gaps = 14/315 (4%)
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
+R L+ +K ++ V+ TC+G+G L + F S++IDE QATEP +VP+
Sbjct: 49 RRLPGLRAQMDKIAVNRFPVLVATCIGSGHQMLDGLTFDSVVIDECTQATEPATLVPLAR 108
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
GAK+ +L+GDH QL + A+ GL +SLFER++ G R L+VQ RMHP +++F
Sbjct: 109 GAKRCVLLGDHKQLSATICSTAASDRGLGKSLFERVLESGGRLHLLDVQRRMHPSIAEFS 168
Query: 747 SNFFYEGSLQNGVCADERKLSKI-DFPWPVPDKPMLFY----VTQGQEEIAGSGTSYVNR 801
+ FYEG L + V ER +KI WP + ++ G+ + GTS+ NR
Sbjct: 169 NINFYEGRLHSEV--GER--AKIPGLYWPASGVQVCLVNIDALSGGETRV---GTSFSNR 221
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
EA V + GM+P IG++ PY GQ+ + + ++ LP + I + +VD
Sbjct: 222 AEAKAVIDAMVVAVEAGMEPGDIGIVVPYSGQKTQIERMLESDYRLPRESVGRISINTVD 281
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK--QPLW 919
AFQG E++LI+ S VRSN IGF DP+R+NV LTRAK G++V G+ K LS + W
Sbjct: 282 AFQGSERELILFSAVRSNRDGDIGFTGDPKRMNVMLTRAKRGLVVFGDVKTLSADTEGDW 341
Query: 920 NNLLNFYKEQKVLVE 934
+++ K +VE
Sbjct: 342 ARWVHWAKSTGCMVE 356
>gi|390350102|ref|XP_788705.3| PREDICTED: uncharacterized protein LOC583716 [Strongylocentrotus
purpuratus]
Length = 3661
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 155/488 (31%), Positives = 238/488 (48%), Gaps = 65/488 (13%)
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVY------QLVKQTGSP--VLV 553
L LN SQ AVK A++ S+IQGPPGTGKTVT A + Y Q ++ P VL
Sbjct: 3176 LHPLNGSQQAAVKKALKDTFSVIQGPPGTGKTVTGAYLAYFFTRLNQQLRAGKMPPQVLY 3235
Query: 554 CAPSNIAVDQLTEKIHR-TGLKVVRVCAKSREAIDSPV---------------------S 591
C PSN +VD + + + + +VRV ++ E + P+ S
Sbjct: 3236 CGPSNKSVDVVAAYLKKFQNISIVRVYSEQIERKEYPIPGVPGLISKWSRKEASMSEGLS 3295
Query: 592 FLALHNQIRNMEMNSELKKLL----QLKEETGELSSADEKRYRMLKKNAEKSLLDNADVI 647
+ALH IR M ++L + + + S D K Y+ A K L N ++
Sbjct: 3296 DIALHRLIR-MRGKPHAEELAAYERRFRTNPAGILSRDIKDYKSTIFEATKQELKNHHIV 3354
Query: 648 CCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVI-LGAKQLILVGDHCQLGPVVM 705
CTC AG R+ + + +++DE+ +EPE ++P++ + KQ++LVGDH QL ++
Sbjct: 3355 LCTCNAAGAGRISRFTRIIQVIVDEAGMCSEPETLIPLVSVKPKQVVLVGDHQQLRSIIT 3414
Query: 706 CKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERK 765
A + G+ SL E+ + L +QYRMH ++ +FPS FY+ L+ R
Sbjct: 3415 EPNARQLGIDISLLEKY---KDKAEMLTIQYRMHKQICEFPSLAFYDDRLRTAESVMRRG 3471
Query: 766 LSKIDFPWPVPDK-PMLFYVTQGQEEI------AGSGTSYVNRTEASNVEKITTRFIRCG 818
I WP + P +F GQEE G+ S N E +V +I I G
Sbjct: 3472 PDPIRSIWPNNGQTPRVFCHVSGQEETLSVKSEEGNEQSKSNSAEIRHVIRIVREMISRG 3531
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+ PE+I V++ Y Q A + + +Q +L ++I+V++V QG E D +++S VRS
Sbjct: 3532 VSPEKIIVLSQYRLQCAQIEERLQTDRNL-----RQIKVSTVVKSQGSEWDYVVLSTVRS 3586
Query: 879 N-------------DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
+ +GF+ND ++NVALTRAK G+I+IGN +L W +L
Sbjct: 3587 KPRIEIEEKPSKGWQRKHLGFINDENQMNVALTRAKQGLIIIGNQYLLRCHNRWREMLKM 3646
Query: 926 YKEQKVLV 933
Y+E LV
Sbjct: 3647 YEETHCLV 3654
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 177/429 (41%), Gaps = 80/429 (18%)
Query: 522 SLIQGPPGTGKTVTSATIVYQ-LVKQTGSPVLVCAPSNIAVD-QLTEKIHRTGLKVVRVC 579
++I GP GTGKT T A + + L ++ + L+C SN A D + + +H+ C
Sbjct: 1407 TMILGPFGTGKTHTLAKAIQRTLTERKDAKFLICTHSNSAADLYIRDYLHK-------FC 1459
Query: 580 AKSREAIDSPVSFLA-LHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
DSP +++ ++ +R + M + K L + G +E+ + +
Sbjct: 1460 E------DSPDTWMVRVYATMRKLSMIRDPVKQYMLIDAAGPRLPTEEECQDWVSRKGPS 1513
Query: 639 SLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK--QLILVGD 696
++ V T V L+ F I+IDE+ QA E E ++P+ L + ++L GD
Sbjct: 1514 IVV----VTLSTAVHLTKTATLRGYFSHIVIDEAGQALETEAIIPLALATEDTSVVLAGD 1569
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIR-----PFRLEVQYRMHPELSKFPSNFFY 751
Q+ P V + A + SL +RL + L + YR + F +
Sbjct: 1570 PKQMSPKVHSPRTMEAKFNMSLLQRLFKYDKQNDCHASCNLTINYRSCQPILDFLKVHYG 1629
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
+ ++ L P+ F +G++++ G TSY+N EA +I
Sbjct: 1630 TAFISKSTSSEHPNLF-----------PLNFVDVRGEDQLVG--TSYMNAEEA----RII 1672
Query: 812 TRFIRCGMK--PEQ--------IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
++ MK PE+ + V++PY Q + Q M+ +G + V +V
Sbjct: 1673 AEYVASLMKHWPEEWDRPKQSDVVVLSPYRVQVQVIRQEMRNRG------LHAVTVETVQ 1726
Query: 862 AFQGREKDLIIMSCVRSNDHQG--------------------IGFLNDPRRLNVALTRAK 901
QG++ + +S VR+ GFL+D LN A TRA+
Sbjct: 1727 NVQGKQYRAVFLSTVRTRSSLNKVDITSLPQVGDRNVRNKFWYGFLSDKALLNTAFTRAQ 1786
Query: 902 YGIIVIGNP 910
I V+G+P
Sbjct: 1787 SLITVMGDP 1795
>gi|225454589|ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
Length = 953
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 291/622 (46%), Gaps = 84/622 (13%)
Query: 369 VGLNKKSIAYFSLAKTDGDMRL-----MQGDELKLRY--SYDASKTWSGLGHVIKIPDNF 421
+GL + F K +G+ RL GD + +R S A T G V + +
Sbjct: 325 IGLGGMHLVLF---KVEGNHRLPPTTLSPGDMVCVRICDSRGAGATSCMQGFVDSLGKD- 380
Query: 422 GDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ---------------LALRKFAV 466
G + + L+S G PT FS F KS DR+ + L+K +
Sbjct: 381 GCSISVALESRHGDPT-----FSKLF-GKSVRIDRIHGLADALTYERNCEALMLLQKNGL 434
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY--AVKHAI------Q 518
++ S + L G D + ++ L +L S Y + + AI +
Sbjct: 435 QKKNPSIAVVATLFGDKEDVAWLEENDLVDWAEVGLDELLESGAYDDSQRRAIALGLNKK 494
Query: 519 RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
RP+ +IQGPPGTGKTV ++ V+Q G VLV AP+N AVD + EK+ G+ +VRV
Sbjct: 495 RPILIIQGPPGTGKTVLLKELIALAVQQ-GERVLVTAPTNAAVDNMVEKLSNIGVNIVRV 553
Query: 579 CAKSREAIDSPVSFLALHNQIRNMEM----------NSELKKLLQLKEETGELSSADEKR 628
+R I S V+ +L +I N ++ S+L+K L+ + L++ +
Sbjct: 554 GNPAR--ISSAVASKSL-GEIVNSKLENFLTEFERKKSDLRKDLRHCLKDDSLAAGIRQL 610
Query: 629 YRMLKK-------NAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPEC 680
+ L K K +L +A V+ T GA DP + ++ F ++IDE+ QA EP C
Sbjct: 611 LKQLGKALKKKEKETVKEVLSSAQVVLATNTGAADPVIRRLDAFDLVIIDEAGQAIEPSC 670
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG--IRPFRLEVQYRM 738
+P++ G K+ I+ GD CQL PV++ +KA GL SL ER L + +L QYRM
Sbjct: 671 WIPILQG-KRCIIAGDQCQLAPVILSRKALEGGLGVSLLERAATLHEEVLATKLTTQYRM 729
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP--VPDKPMLFYVTQ--------GQ 788
+ ++ + S Y GSL++ L F P + P+L T+ G
Sbjct: 730 NDAIASWASKEMYGGSLKSSSSVFSHLLVDSPFVKPAWITQCPLLLLDTRMPYGSLSVGC 789
Query: 789 EE---IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
EE AG+G S+ N EA V + I G+ P I V +PY Q L +
Sbjct: 790 EEHLDPAGTG-SFYNEGEADIVVQHVLSLISAGVSPTAIAVQSPYVAQVQLLRDRLD--- 845
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
+P + +EVA++D+FQGRE D +I+S VRSN +GFL D RR+NVA+TRA+ +
Sbjct: 846 EIPEAV--GVEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRMNVAITRARKHVA 903
Query: 906 VIGNPKVLSKQPLWNNLLNFYK 927
V+ + + LL +
Sbjct: 904 VVCDSSTICHNTFLARLLRHIR 925
>gi|332663425|ref|YP_004446213.1| ATPase AAA [Haliscomenobacter hydrossis DSM 1100]
gi|332332239|gb|AEE49340.1| AAA ATPase [Haliscomenobacter hydrossis DSM 1100]
Length = 634
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 252/515 (48%), Gaps = 55/515 (10%)
Query: 443 FSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA--- 499
SVD ++ ++ M+ A+ K + + LLG P HF+
Sbjct: 127 LSVDILFDERTYIEMEKAMHKVISATKGRIQELRSVLLGIK----------PAHFTPLDM 176
Query: 500 -PNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
N+P LN SQ AV + + +++I GPPGTGKT T + +L+ + VLV APS
Sbjct: 177 PINIPALNPSQNLAVNQILAAQDVAVIHGPPGTGKTTTLVQAI-KLLAEREKTVLVTAPS 235
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKL----LQ 613
N AVD L+EK+ L+VVR+ SR ID + L QI + +KK+
Sbjct: 236 NTAVDLLSEKLAELDLRVVRIGNISR--IDESILRHTLEYQISQHPDSKNVKKVKIQAAD 293
Query: 614 LKEETGELSS-----ADEKRYRMLKKNAEKS-------------LLDNADVICCTCVGAG 655
+ + L S A E+R R+ ++ +E S +LD A VI CT VGA
Sbjct: 294 YRRQANRLRSKRGYEAYEERKRLEQEASELSAWANSLEQRLVDMILDEAQVITCTLVGAA 353
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLS 715
P L + KF + ++DE+ QA EP +P I A +L+L GD QL P V ++AA+ G +
Sbjct: 354 HPVLDQRKFRTAIVDEAAQALEPATWIP-ITKASKLVLTGDPFQLPPTVKSQEAAKKGFN 412
Query: 716 QSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
++ E+ + + L +QYRM+ + F + FY L + A E K ++D
Sbjct: 413 ITMIEKCLKRLQQVNLLNIQYRMNEGIMGFSNRQFYNNEL---MAAPEVKDHRLDI---A 466
Query: 776 PDKPMLFYVTQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK--PEQIGVITPY 830
D P++F T G E++ + S N E + + + ++ P I +I+PY
Sbjct: 467 ADAPVIFIDTAGCGFDEKVHHAYQSKYNPEEFQVLREHLYQIAEAFLEKIPPSIAIISPY 526
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDP 890
Q + ++ P ++ + ++D FQG+EKDL+ +S VRSN IGFL+D
Sbjct: 527 REQALHMEDELKDD---PMVRKLDLTINTIDGFQGQEKDLVFISLVRSNPKGEIGFLSDY 583
Query: 891 RRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
RR+NVA+TRA+ +I++G+ + + + L +
Sbjct: 584 RRMNVAMTRARKQLIIVGDSATIGNNKFYRDFLEY 618
>gi|156839982|ref|XP_001643676.1| hypothetical protein Kpol_1057p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114297|gb|EDO15818.1| hypothetical protein Kpol_1057p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 679
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 158/507 (31%), Positives = 256/507 (50%), Gaps = 58/507 (11%)
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
+ ++ RM+ +RK + +R++ + ++ F P + + LN SQ
Sbjct: 161 TITYKRMESTMRKL----KEFEGLPDNRIIEYLLNARQFIRQEPSNKITFHNDQLNESQK 216
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A+K A+ +S+I GPPGTGKT T ++ QLV++ G VLVC PSNI+VD + E++ +
Sbjct: 217 DAIKFALANDISIIHGPPGTGKTYTLVELILQLVEK-GQRVLVCGPSNISVDTILERLAK 275
Query: 571 T--GLKVVRVCAKSR-------EAID----SPVSFLALHNQIRNMEMN-SELKKLLQ--L 614
G ++R+ +R ++D S S + + R+++ + +KK+ +
Sbjct: 276 VLPGNLLLRIGHPARLLEANLSHSLDILSKSGDSGAIVRDIYRDIDKTIASIKKVRKPDA 335
Query: 615 KEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------FHSIL 668
+ E + K R ++ L+ A V+ T G+ L I F +++
Sbjct: 336 RREGWKEVKELRKELRQRERKVVNDLILEAKVVVATLHGSSSRELCGIYNQVPKLFDTLI 395
Query: 669 IDESMQATEPECMVPVILGAK----QLILVGDHCQLGPVVMCK--KAARAGLSQSLFERL 722
IDE Q+ EP+C +P+I K +L+L GD+ QL P + + + L +LF+RL
Sbjct: 396 IDEVSQSLEPQCWIPLISHYKSDFTKLVLAGDNKQLPPTIKTEDNDKVKVTLGTTLFDRL 455
Query: 723 VVLGIRPFR--LEVQYRMHPELSKFPSNFFYEG------SLQNGVCADERKLSKIDFPWP 774
V F+ L VQYRM+ ++ +FPS Y G S+ N V +D + D P
Sbjct: 456 VKNYGDQFKLLLNVQYRMNEQIMEFPSKQMYGGKLIADASVANNVLSDLPGVDSNDDTLP 515
Query: 775 VPDKPMLFYVTQGQEEIA------GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVIT 828
P+++Y TQG + + G +S N E V+ + I + + IGVI+
Sbjct: 516 ----PLIWYDTQGDDFLEQADNEDGIVSSKFNENEVLLVKDHIIKLIESNVPQDAIGVIS 571
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY Q + L +Q Q Y IE+++VD FQGREK++I++S VRSND +GFL
Sbjct: 572 PYSAQTSLLKSLIQEQ-------YPLIEISTVDGFQGREKEVIVLSLVRSNDKMEVGFLR 624
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSK 915
D RRLNVA++R K + VIGN +VL +
Sbjct: 625 DDRRLNVAISRPKKQLCVIGNMEVLER 651
>gi|451855806|gb|EMD69097.1| hypothetical protein COCSADRAFT_206223 [Cochliobolus sativus ND90Pr]
Length = 1974
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 171/545 (31%), Positives = 254/545 (46%), Gaps = 97/545 (17%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV-------------------YQL 543
++N +Q A+K AI +LIQGPPG+GKT T IV Q
Sbjct: 1270 NVNTAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAILSDSLRNRGTTISVPGQQR 1329
Query: 544 VKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVSFLAL 595
+ +LVCAPSN AVD+L + + G+K V + R +AI + V + L
Sbjct: 1330 SEAASKKLLVCAPSNAAVDELVMRF-KDGIKTLNGESRKVNIVRLGRGDAIKASVQDVTL 1388
Query: 596 HNQIR----------------------NMEMNSELKKLLQLK---EETGELSSADEKRYR 630
+ + +++ +LK+ Q + E G+ ++ E+
Sbjct: 1389 EELVNQRLGVDPSDSKDKEATQKLFQDHKKISDQLKQAYQQRDSGEVKGDAAAKLEEDIN 1448
Query: 631 MLK-------------KNAEKSLLDNAD---------------VICCTCVGAGDPRL--L 660
L+ K+ EK NAD VIC T G+G L
Sbjct: 1449 ALRRQKTALGTKIDNVKDDEKLASRNADLNRRRAQEAVLNEAHVICATLSGSGHEMFQGL 1508
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
I+F ++++DE+ Q E ++P+ G + ILVGD QL P V K+AAR QSLF
Sbjct: 1509 SIEFETVIVDEAAQCVEMSALIPLKYGCAKCILVGDPKQLPPTVFSKEAARFQYEQSLFV 1568
Query: 721 RLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
R+ L+ QYRMHPE+S FPS FY+ L +G D L K + + P
Sbjct: 1569 RMQKNHPNDVHLLDTQYRMHPEISLFPSQTFYDSRLLDG--GDMAGLRKQPWHQSMVLGP 1626
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRA 835
F+ +GQ+ A G S +N E +++T+ + K ++G+ITPY+ Q
Sbjct: 1627 YRFFDVKGQQAAAPKGHSLINVAEIKVAMQLYKRLTSDYPDYDFK-GKVGIITPYKSQLR 1685
Query: 836 FLVQH-MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
L Q MQ G I ++I+ + DAFQGRE ++II SCVR++ GIGFL D RR+N
Sbjct: 1686 ELKQSFMQVYGQ---SIIEDIDFNTTDAFQGRESEVIIFSCVRASPAGGIGFLQDIRRMN 1742
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN-LKESLILFSKPKQY 953
V LTRAK + V+GN + L + WN L+ KE+ +G + L + F PK+
Sbjct: 1743 VGLTRAKSSLWVLGNSESLQRGQYWNKLIVNAKERNRFTDGDVPKMLNQHSSKFPAPKEG 1802
Query: 954 FKKNN 958
+ + N
Sbjct: 1803 YVQPN 1807
>gi|255714232|ref|XP_002553398.1| KLTH0D15862p [Lachancea thermotolerans]
gi|238934778|emb|CAR22960.1| KLTH0D15862p [Lachancea thermotolerans CBS 6340]
Length = 2090
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 252/527 (47%), Gaps = 107/527 (20%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIV-YQLVKQTGSP------------ 550
LN SQ A+ + SLIQGPPGTGKT T IV Y L Q P
Sbjct: 1313 LNNSQAEAIVSTVSCEGFSLIQGPPGTGKTKTILGIVGYTLSTQKALPPGVIKQPLDAVA 1372
Query: 551 -----------VLVCAPSNIAVDQLTEKIH-----RTGL----KVVRVCAKSREAIDSPV 590
VL+CAPSN AVD+L ++ ++G K+VR+ +A+++ +
Sbjct: 1373 SSTEQLLLKQKVLICAPSNAAVDELVLRLKLGVFDKSGRLFQPKLVRIGRP--DAVNAAI 1430
Query: 591 SFLALHNQI------RNMEM--NSELKKLLQL---------------------------- 614
L L Q+ +N E N +L+K LQ
Sbjct: 1431 RDLTLEEQVEKRLNGKNYEFASNPDLEKNLQAAIGERRQLRHKLDNEDGSAGSTLSTDDI 1490
Query: 615 --------------------KEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGA 654
K+E E +S + + + ++ A+ +L +DVIC T G+
Sbjct: 1491 TKIQLSIRELSRKINELGKQKDEIREKNSVNFRNREVDRRKAQSRILAESDVICSTLSGS 1550
Query: 655 GDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARA 712
+ L +KF ++++DE+ Q TE ++P+ GAK+ I+VGD QL P V+ A+
Sbjct: 1551 AHDIMASLGVKFDTVIVDEACQCTELSSIIPLRYGAKRCIMVGDPNQLPPTVLSGAASNF 1610
Query: 713 GLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
+QSLF R+ P L VQYRMHP +SKFPS FY+G L +G D ++ +
Sbjct: 1611 KYNQSLFVRMEK-QCSPHLLNVQYRMHPAISKFPSIEFYKGKLTDG--PDMETINTRPWH 1667
Query: 773 WPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEASN----VEKITTRFIRCGMKPEQIGVI 827
P P F+ + G++E S+VN E VE + + + +IG+I
Sbjct: 1668 SRPPLGPYKFFDIATGKQEQNKKTMSFVNFEECKVAIELVEYLLNSYEKSFDFSGKIGII 1727
Query: 828 TPYEGQRAFLVQHM-QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-GIG 885
+PY Q + + +Y G+ I ++ ++D FQG+EK++II+SCVR++D + G+G
Sbjct: 1728 SPYREQMQTMRREFRRYFGN---TIAGYVDFNTIDGFQGQEKEIIIISCVRADDTKSGVG 1784
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
FL D RR+NVALTRAK + ++G+ L K LW NL+ K++ L
Sbjct: 1785 FLKDFRRMNVALTRAKTSMWILGHHSSLFKNKLWRNLITDAKDRNCL 1831
>gi|241949191|ref|XP_002417318.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640656|emb|CAX44951.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 711
Score = 202 bits (515), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 252/456 (55%), Gaps = 50/456 (10%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A++ AI +++I GPPGTGKT T ++ QL + G VLVC PSNI+VD
Sbjct: 224 LNASQRQAIEFAINDSNITIIHGPPGTGKTYTLIELIQQLTSK-GEKVLVCGPSNISVDT 282
Query: 564 LTEKIHRT--GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM----NSELKKLL-QLKE 616
+ E++ +K++R+ +R + + L + ++ E+ +SE++ +L ++K+
Sbjct: 283 ILERLGNKYEPMKLIRIGHPARLLVKNLQHSLEILSKTYGREIINDISSEIQSVLTKIKK 342
Query: 617 --ETGELSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLK------ 661
+ GE A ++LKK + LL A V+ T G+G L
Sbjct: 343 CKKYGE-RKALYSELKLLKKELRQRERKIVNELLVQAQVVVATLHGSGSFELKNSVGNND 401
Query: 662 ---IKFHSILIDESMQATEPECMVPVILGA--KQLILVGDHCQLGPVVMCKKAARAG--- 713
+ F +I+IDE Q+ EP+C +P++L K+L++ GD+ QL P + +K+ +
Sbjct: 402 SSGMVFDTIIIDEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKKQKSNSSSSAS 461
Query: 714 -LSQSLFERLV--VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADE-RKLSK 768
L+ +LF+RLV G + +L +VQYRM+ + +FPS Y+ L+ C D R +S
Sbjct: 462 ILATTLFDRLVKHCQGDQYKKLLDVQYRMNKSIMQFPSMQLYDNQLK---CDDSVRDISL 518
Query: 769 IDFPW-PVPDKPM---LFYVTQGQE---EIAGS--GTSYVNRTEASNVEKITTRFIRCGM 819
+D P + D M ++Y T+G E +I+ S G S N E V+ + + CG+
Sbjct: 519 VDLPGVEINDDTMTKCIWYDTEGGEFPEQISESVDGDSKYNDMELLVVKGHIKKLLSCGV 578
Query: 820 KPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN 879
+P+ IGVI PY Q L + M +IE+++VD FQGREK++II++ VRSN
Sbjct: 579 RPQDIGVIAPYSAQVQNLKKQMGLGDGANGDKDGQIEISTVDGFQGREKEVIILTLVRSN 638
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
D + IGFL++ RRLNVA+TR K + V+G+ +++++
Sbjct: 639 DSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQ 674
>gi|224613390|gb|ACN60274.1| Peroxisomal proliferator-activated receptor A-interacting complex
285 kDa protein [Salmo salar]
Length = 509
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 230/494 (46%), Gaps = 76/494 (15%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT-------------GSP 550
DLN SQ A+K A+ +LIQGPPGTGKTV +VY Q GS
Sbjct: 1 DLNISQTRAIKEALDNRFTLIQGPPGTGKTVVGVHLVYWFFLQNQKDPNHLRPKAVGGSS 60
Query: 551 ----VLVCAPSNIAVDQLTEKIH--RTGLKVVRVCAKSREAIDSP--------------- 589
+L C PSN +VD + ++ R LK +RV ++ E ++ P
Sbjct: 61 KRKCILYCGPSNKSVDVVAGQLLKLRKVLKPLRVYSEQMEMLEFPYPGSNLKLSRRSIRE 120
Query: 590 ------VSFLALHNQIRNME--MNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
+S + LH+ IR E ++E+ + +L+ + + Y++L A L
Sbjct: 121 ERPKRELSSITLHHLIRMPENPFSNEIIYFDARIQRGEDLTDKEIESYKVLLSQARNHEL 180
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQL 700
DVI CTC A +P K+ I+IDE ATEPE +P++ +Q++L+GDH QL
Sbjct: 181 MRHDVILCTCTAASNPNFYKLDLKQIIIDECAMATEPEAFIPLVTHKPEQIVLLGDHKQL 240
Query: 701 GPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVC 760
P+ +AR G+ +SLFER + + L+ QYRMH + +FPS FY G L+ G
Sbjct: 241 QPITHSDLSARLGMRKSLFERYME---KALMLDTQYRMHERICEFPSKEFYNGILKTGAT 297
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQE------EIAGSGTSYVNRTEASNVEKITTRF 814
+ L P+LF G+E G+ S N EA +I +
Sbjct: 298 PKDSVLLAQSHHL----TPILFGHVSGKEISLVVSTERGNENSKANSAEAEESVRIASLL 353
Query: 815 IR-CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIM 873
I+ G+ I ++TPY Q A + +L K Q + V ++ QG E +I+
Sbjct: 354 IKHAGVAASDIAILTPYNAQVA------KVNETLLMKHIQNVNVNTITKSQGSEWRYVIL 407
Query: 874 SCVRSNDHQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
S VRS I GF+ DP ++NV +TRA+ G+ +IGN ++L LW
Sbjct: 408 STVRSCPKSEIDTEPTKAWLTKKLGFVMDPNQVNVGITRAQEGLCIIGNQELLRCSSLWK 467
Query: 921 NLLNFYKEQKVLVE 934
LL Y++ +V+
Sbjct: 468 RLLVHYQQCGCVVD 481
>gi|224124044|ref|XP_002319231.1| predicted protein [Populus trichocarpa]
gi|222857607|gb|EEE95154.1| predicted protein [Populus trichocarpa]
Length = 788
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 238/477 (49%), Gaps = 52/477 (10%)
Query: 485 DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI--QRPLSLIQGPPGTGKTVTSATIVYQ 542
DE F HL K F + SQ A+ + +RP +IQGPPGTGK+ ++
Sbjct: 302 DEADFDEHLGKPF--------DDSQRRAITLGLNKKRPFLIIQGPPGTGKSGLLKELIAL 353
Query: 543 LVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNM 602
V + G VLV AP+N AVD + EK+ GL +VRV +R I S V+ +L + + +
Sbjct: 354 AVGK-GERVLVTAPTNAAVDNMVEKLSNIGLNIVRVGNPAR--ISSAVASKSLGDIVNSK 410
Query: 603 ---------EMNSELKKLLQ--LKEET-----GELSSADEKRYRMLKKNAEKSLLDNADV 646
S+L+K L LK+++ +L K + +K + +L +A V
Sbjct: 411 LAAFRTEFERKKSDLRKDLSHCLKDDSLAAGIRQLLKQLGKTLKKKEKETVREVLSSAQV 470
Query: 647 ICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM 705
+ T GA DP + ++ F +++DE+ QA EP C +P++ G K+ IL GD CQL PV++
Sbjct: 471 VLATNTGAADPLIRRLDAFDLVVMDEAGQAIEPSCWIPILQG-KRCILAGDQCQLAPVIL 529
Query: 706 CKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
+KA GL SL ER L G+ +L QYRM+ ++ + S Y G L++
Sbjct: 530 SRKALEGGLGVSLLERASTLHEGVLATKLTTQYRMNDAIASWASKEMYSGLLKSSSTVAS 589
Query: 764 RKLSKIDFPWP--VPDKPMLFYVTQ--------GQEE---IAGSGTSYVNRTEASNVEKI 810
L F P + P+L T+ G EE AG+G S+ N EA V +
Sbjct: 590 HLLVDTPFVKPTWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTG-SFYNEGEADIVVQH 648
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
+ I G++P I V +PY Q L + + LP +E+A++D+FQGRE D
Sbjct: 649 VSSLIFSGVRPTAIAVQSPYVAQVQLLRERLD---ELPEA--DGVEIATIDSFQGREADA 703
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
+I+S VRSN +GFL D +R NVA+TRA+ + V+ + + LL +
Sbjct: 704 VIISMVRSNTLGAVGFLGDSKRTNVAITRARKHVAVVCDSSTICHNTFLARLLRHIR 760
>gi|326505658|dbj|BAJ95500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 260/504 (51%), Gaps = 45/504 (8%)
Query: 453 SFDRMQLALRKFAVDDQS-VSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
++ RM+ AL + + Q+ SA + L G N R FS N +L+ SQ
Sbjct: 151 TYRRMKDALIQLSKGIQAGPSANLVPVLFGENSP---MRSKDAVKFSPFN-KNLDDSQKD 206
Query: 512 AVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A+ A++ R + L+ GPPGTGKT T I+ Q VK+ G+ +L CA SNIAVD + E++ +
Sbjct: 207 AISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKR-GAKILACAASNIAVDNIVERLSQ 265
Query: 571 TGLKVVRVCAKSR---EAIDSPVS--FLALHNQIRNMEMNSELK----KLLQLKEETG-- 619
K+VR+ +R + +DS + L N ++ E+K KLL+ K+
Sbjct: 266 YRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLNSKLLKAKDRNTKR 325
Query: 620 ----ELSS-ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
EL + A E+R R ++ A ++ NADV+ T GA ++ I F ++IDE+ Q
Sbjct: 326 DIRKELKTLAKEERKR--QQLAVADVIKNADVVLSTLTGASSKKIAGISFDLVIIDEAAQ 383
Query: 675 ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV------VLGIR 728
A E C + ++ GA+ +L GDH QL P + +A + G+ ++LFERL + +
Sbjct: 384 ALEVACWIALLKGAR-CVLAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEGYGDEITSM- 441
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID-FPWPVPDKPMLFYV-TQ 786
L VQYRMH + + S Y ++ L ++ +P + V T
Sbjct: 442 ---LTVQYRMHELIMNWSSKELYSNKIKAHSSVAGHMLYDLEGVNKSSSTEPTIILVDTT 498
Query: 787 G--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
G EE+ S +N EA+ + G++ IG+ITPY Q V ++
Sbjct: 499 GCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVRASDIGIITPYSAQ----VTCLKMM 554
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
+ AK+ +++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NVA+TRA+
Sbjct: 555 RNKDAKL-KDLEISTVDGFQGREKEAIIISMVRSNQKKEVGFLSDHRRMNVAVTRARRQC 613
Query: 905 IVIGNPKVLSKQPLWNNLLNFYKE 928
V+ + + +S L+ +++E
Sbjct: 614 CVVCDAETVSSDRFLKRLVEYFEE 637
>gi|229442439|gb|AAI72938.1| hypothetical protein LOC229003 [synthetic construct]
Length = 547
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 236/497 (47%), Gaps = 77/497 (15%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK----------------QTG 548
LN+SQ AV+ A+Q+ ++IQGPPGTGKTV IVY + Q G
Sbjct: 47 LNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQLG 106
Query: 549 SP-VLVCAPSNIAVDQLTEKIHR--TGLKVVRVCAKSREAIDSPV--------------- 590
P VL C PSN +VD L + R T +K +RV + EA + P+
Sbjct: 107 GPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQE 166
Query: 591 -------SFLALHNQIRNME--MNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
+ LH++IR +E++K E S D + YR + A K L
Sbjct: 167 GRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLRVYRRVLGKARKHEL 226
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK---QLILVGDHC 698
+ VI CTC A L + ILIDE+ ATEPE ++P++ +K +++L+GDH
Sbjct: 227 ERHSVILCTCSCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGDHK 286
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QL PVV ++ G+ +SLFER I L+ QYRMH ++ FPS FY G L+
Sbjct: 287 QLRPVVKSEQLQSLGMDRSLFERYHRDAI---MLDTQYRMHKDICSFPSVEFYGGKLKTW 343
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT--TRFIR 816
+D R+L I P ++F QG E+ T N +N E++T R I+
Sbjct: 344 --SDLRRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRIIK 401
Query: 817 -----CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
+ P+ I V+TPY Q A + + + +G + V S+ QG E +
Sbjct: 402 QLTLDRTVDPKDIAVLTPYNAQAAAISRGLMQRG------VTGVTVTSITKSQGSEWRYV 455
Query: 872 IMSCVRSNDHQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
I+S VR+ + GF+ DP ++NVA+TRA+ + +IG+ +L PL
Sbjct: 456 IVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCCPL 515
Query: 919 WNNLLNFYKEQKVLVEG 935
W+ LL+F + Q LV
Sbjct: 516 WHRLLDFCEAQHSLVSA 532
>gi|242038955|ref|XP_002466872.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
gi|241920726|gb|EER93870.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
Length = 650
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 236/453 (52%), Gaps = 32/453 (7%)
Query: 499 APNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
+P +L+ SQ A+ A+ R + L+ GPPGTGKT T I+ Q VK+ GS +L CA S
Sbjct: 194 SPFNKNLDDSQKEAISKALGSRDVFLLHGPPGTGKTTTIIEIILQEVKR-GSKILACAAS 252
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVS--FLALHNQIRNMEMNSELK--- 609
NIAVD + E++ R K+VR+ +R + +DS + L N ++ E+K
Sbjct: 253 NIAVDNIVERLARYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLN 312
Query: 610 -KLLQLKEETG------ELSS-ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
KLL+ K+ EL + A E+R R ++ A +L NADV+ T GA +L
Sbjct: 313 SKLLKAKDRNTKRDIRKELRALAKEERKR--QQLAVTDVLKNADVVLTTLTGASSKKLNG 370
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
I F ++IDE+ QA E C + ++ G + IL GDH QL P + +A + G+ ++LFER
Sbjct: 371 ITFDLVVIDEAAQALEVACWIALLKGPR-CILAGDHLQLPPTIQSVEAEKKGMGKTLFER 429
Query: 722 LVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID-FPWPVPDK 778
L L VQYRMH + + S Y ++ L ++ +
Sbjct: 430 LTEAYGEEITSMLTVQYRMHEHIMSWSSKELYNNKIKAHSSVAGHMLYDLEEVTRSSSTE 489
Query: 779 PMLFYV-TQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRA 835
P + + T G EE+ S +N EA+ + G+ IG+ITPY Q
Sbjct: 490 PTIILIDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVNASDIGIITPYSAQ-- 547
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
V ++ + AK+ +++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NV
Sbjct: 548 --VTCLKMMRNKDAKL-KDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNV 604
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
A+TRA+ ++ + + +S L+ +++E
Sbjct: 605 AVTRARRQCCLVCDVETVSNDRFLKRLVEYFEE 637
>gi|340960580|gb|EGS21761.1| hypothetical protein CTHT_0036280 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1520
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 221/456 (48%), Gaps = 75/456 (16%)
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNI 559
N P LN SQ A++ A+ L+ + GPPGTGKT T I+ L GS +L+ AP++
Sbjct: 1042 NRPHLNPSQNAAIEAALNSSLTCLWGPPGTGKTETIVEIIRALQTSFEGSRLLITAPTHN 1101
Query: 560 AVDQLTEK----IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
AVD + + + TGL A D ++ L + +IR +++ +L K
Sbjct: 1102 AVDNVMRRYIGRLASTGL-----------ADDPSLAPLRVSTEIR--KVSKDLWKY-TCD 1147
Query: 616 EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQA 675
G+ + K K+ ++S ++ TC+GAG L F ++IDE+ Q
Sbjct: 1148 AHVGQEVYSGRKVLDEAKRRVQES-----KIVFTTCIGAGIGLLRSETFDIVIIDEASQQ 1202
Query: 676 TEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV----------- 724
TEP +VP++ G ++ +LVGDH QL P V +SLFERL V
Sbjct: 1203 TEPASLVPLVKGCQRAVLVGDHVQLRPTVHPNSLV-MEFDKSLFERLFVEDSTSSKSLDT 1261
Query: 725 --LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP-----D 777
I L++QYRMHP + F S FY G LQ G+ R L FPWP+ D
Sbjct: 1262 KSQSIARLMLDIQYRMHPFICAFSSKEFYNGKLQTGIPRSFRPLPNSQFPWPLSRDGEGD 1321
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGM---KPEQ----------- 823
K + +V E G G S N+ +A +I C M +P +
Sbjct: 1322 KARMVFVECATREDLG-GKSKTNKGQADLCLRI------CEMLCTRPGEGKHDSGQEKQS 1374
Query: 824 -----IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
I V+TPY Q L Q + S + +EV+S+D FQGRE D++++ VR
Sbjct: 1375 ELKQLIAVLTPYARQAELLKQLLSPFAS------RGVEVSSIDGFQGREADIVVLVTVRC 1428
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
N+ + IGFL D RR+NVALTRA+ G+++IGN + L+
Sbjct: 1429 NESREIGFLKDVRRMNVALTRARSGVVIIGNRETLT 1464
>gi|448511934|ref|XP_003866635.1| Hcs1 protein [Candida orthopsilosis Co 90-125]
gi|380350973|emb|CCG21196.1| Hcs1 protein [Candida orthopsilosis Co 90-125]
Length = 669
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 156/443 (35%), Positives = 236/443 (53%), Gaps = 47/443 (10%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LNRSQ A+ AI + +S+I GPPGTGKT+T ++ QL + G VLVC PSNI+VD
Sbjct: 201 LNRSQKSAIDFAINKSNISIIFGPPGTGKTMTLVELIRQLTTR-GEKVLVCGPSNISVDT 259
Query: 564 LTEKI--HRTGLKVVRVCAKSR---EAIDSPVSFLA----------LHNQIRN-MEMNSE 607
+ E++ H ++VR+ +R + + L+ L N I++ + +
Sbjct: 260 ILERLGEHYKAGELVRIGHPARLLPVNVQHSLEVLSKSYGRDVIKDLENDIQSVLGKIKK 319
Query: 608 LKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG--DPRLLKIKFH 665
K+ ++ K EL S ++ + +K + LL+ A V+ T GAG D + F
Sbjct: 320 CKRYVERKTLYQELKSLKKELVQRERKIVHE-LLNQAKVVLATLHGAGSYDLKRSGANFD 378
Query: 666 SILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
SI+IDE Q+ EP+C +P++ K +L++ GD+ QL P +M A L +LF+RLV
Sbjct: 379 SIIIDEVSQSLEPQCWIPLLHNDKFKRLVIAGDNMQLPPTIMSGTATL--LETTLFDRLV 436
Query: 724 -VLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
L F+ L VQYRM+ + KFPS YE L E KL+ D P +
Sbjct: 437 NKLEGDKFKKLLNVQYRMNDSIMKFPSMQLYEDKLIGDESVKEIKLT--DLPGVSRNDET 494
Query: 781 ----LFYVTQG-----QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
++Y TQG Q+ + G S N E V + I G+ P+ IG+I PY
Sbjct: 495 NVQCVWYDTQGGDFPEQKLESIKGDSKYNEMELQIVRGHVKKLIESGVPPQDIGIIAPYA 554
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
Q L + + P + IEV++VD FQGREK++II++ VRSND + +GFL++ R
Sbjct: 555 AQVQLLKKQLG-----PDSL---IEVSTVDGFQGREKEVIILTLVRSNDERDVGFLSEER 606
Query: 892 RLNVALTRAKYGIIVIGNPKVLS 914
RLNVA+TR K + VIG+ ++++
Sbjct: 607 RLNVAITRPKRQLCVIGDLQLMN 629
>gi|224029893|gb|ACN34022.1| unknown [Zea mays]
gi|414871609|tpg|DAA50166.1| TPA: hypothetical protein ZEAMMB73_963119 [Zea mays]
Length = 646
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 236/453 (52%), Gaps = 32/453 (7%)
Query: 499 APNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
+P +L+ SQ A+ A+ R + L+ GPPGTGKT T I+ Q VK+ GS +L CA S
Sbjct: 190 SPFNKNLDDSQKEAISKALGSRDVFLLHGPPGTGKTTTIIEIILQEVKR-GSKILACAAS 248
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVS--FLALHNQIRNMEMNSELK--- 609
NIAVD + E++ R K+VR+ +R + +DS + L N ++ E+K
Sbjct: 249 NIAVDNIVERLARYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEMKVLN 308
Query: 610 -KLLQLKEETG------ELSS-ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
KLL+ K+ EL + A E+R R ++ A +L NADV+ T GA +L
Sbjct: 309 SKLLKAKDRNTKRDIRKELKTLAKEERKR--QQLAVTDVLKNADVVLTTLTGASSKKLNG 366
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
I F ++IDE+ QA E C + ++ G + IL GDH QL P + +A + G+ ++LFER
Sbjct: 367 ITFDLVVIDEAAQALEVACWIALLKGPR-CILAGDHLQLPPTIQSVEAEKKGMGKTLFER 425
Query: 722 LVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID-FPWPVPDK 778
L L VQYRMH + + S Y ++ L ++ +
Sbjct: 426 LTEAYGEEITSMLTVQYRMHEHIMSWSSKELYNNKIKAHSSVAGHMLYDLEEVTRSSSTE 485
Query: 779 PMLFYV-TQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRA 835
P + + T G EE+ S +N EA+ + G+ IG+ITPY Q
Sbjct: 486 PTIVLIDTTGCDMEEVKDEEESTMNEGEAAVSIAHAKLLVESGVNASDIGIITPYAAQ-- 543
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
V ++ + AK+ +++E+++VD FQGREK+ II+S VRSN + +GFL+D RR+NV
Sbjct: 544 --VTCLKMMRNKDAKL-KDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNV 600
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
A+TRA+ ++ + + +S L+ +++E
Sbjct: 601 AVTRARRQCCLVCDVETVSSDRFLKRLVEYFEE 633
>gi|13904994|gb|AAH06779.1| BC006779 protein, partial [Mus musculus]
Length = 717
Score = 202 bits (514), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 236/497 (47%), Gaps = 77/497 (15%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK----------------QTG 548
LN+SQ AV+ A+Q+ ++IQGPPGTGKTV IVY + Q G
Sbjct: 196 LNQSQDRAVRSALQKQFTVIQGPPGTGKTVVGFHIVYWFHRSNQEQMPTDSSPSGEEQLG 255
Query: 549 SP-VLVCAPSNIAVDQLTEKIHR--TGLKVVRVCAKSREAIDSPVS-------------- 591
P VL C PSN +VD L + R T +K +RV + EA + P+
Sbjct: 256 GPCVLYCGPSNKSVDVLGGLLLRRKTEMKPLRVYGEQAEATEFPLPGVSNRSLFGKTSQE 315
Query: 592 --------FLALHNQIRNME--MNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLL 641
+ LH++IR +E++K E S D + YR + A K L
Sbjct: 316 GRPNQSLRSITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLRVYRRVLGKARKHEL 375
Query: 642 DNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK---QLILVGDHC 698
+ VI CTC A L + ILIDE+ ATEPE ++P++ +K +++L+GDH
Sbjct: 376 ERHSVILCTCSCAASKSLKILNVRQILIDEAGMATEPETLIPLVCFSKTVEKVVLLGDHK 435
Query: 699 QLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
QL PVV ++ G+ +SLFER I L+ QYRMH ++ FPS FY G L+
Sbjct: 436 QLRPVVKSEQLQSLGMDRSLFERYHRDAI---MLDTQYRMHKDICSFPSVEFYGGKLKT- 491
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT--TRFIR 816
+D R+L I P ++F QG E+ T N +N E++T R I+
Sbjct: 492 -WSDLRRLPSILGHTGKPSCSVIFGSVQGHEQKLLVSTEDGNENSRANPEEVTQVVRIIK 550
Query: 817 C-----GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
+ P+ I V+TPY Q A + + + +G + V S+ QG E +
Sbjct: 551 QLTLDRTVDPKDIAVLTPYNAQAAAISRGLMQRG------VTGVTVTSITKSQGSEWRYV 604
Query: 872 IMSCVRSNDHQGI-------------GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
I+S VR+ + GF+ DP ++NVA+TRA+ + +IG+ +L PL
Sbjct: 605 IVSTVRTCPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCCPL 664
Query: 919 WNNLLNFYKEQKVLVEG 935
W+ LL+F + Q LV
Sbjct: 665 WHRLLDFCEAQHSLVSA 681
>gi|453088648|gb|EMF16688.1| hypothetical protein SEPMUDRAFT_122176 [Mycosphaerella populorum
SO2202]
Length = 2003
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 247/547 (45%), Gaps = 124/547 (22%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQT--------------- 547
+LN +Q AV A++ SLIQGPPG+GKT T IV L+ Q
Sbjct: 1270 ELNTAQSEAVNGALENEGFSLIQGPPGSGKTKTIVAIVGGLLTQVLKNAPRGLHKISMPA 1329
Query: 548 -------------GSPVLVCAPSNIAVDQLTEKIHRT---------GLKVVRVCAKSREA 585
+LVCAPSN AVD+L ++ + +KVVR+ EA
Sbjct: 1330 LGGHGNGASGDAPAKKLLVCAPSNAAVDELVLRLMKGVKSKDGTHHDIKVVRIG--RSEA 1387
Query: 586 IDSPVSFLALHNQI------------RNMEMNSEL-----------KKLLQLKEETGELS 622
I + V+ + + + + +MN+EL + L Q ++ E+
Sbjct: 1388 ISAQVADVTMETLVQQKIGGSNAADDKQRKMNAELFKEHSDISTQLRDLYQQRDSEEEMR 1447
Query: 623 SADEKRYRML-----------------------------------KKNAEKSLLDNADVI 647
D + ++L +K A++++LD A VI
Sbjct: 1448 KLDPLKRKLLEDSIVHIRRRKAELGQRIDSVKDNEKSAGREQELNRKRAQQAVLDEAHVI 1507
Query: 648 CCTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM 705
C T G+G L I+F +++IDE+ Q E ++P+ G + ++VGD QL P V
Sbjct: 1508 CATLSGSGHDMFSGLSIEFETVIIDEAAQCVEMSSLIPLKYGCVKCVMVGDPKQLPPTVF 1567
Query: 706 CKKAARAGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNG-VCADE 763
K+AA+ QSLF R+ + L + QYRMHP++S FPS FY+G L++G A+
Sbjct: 1568 SKEAAKFQYEQSLFVRMQNNHPKDVHLLDTQYRMHPDISVFPSRTFYDGLLKDGPSMANL 1627
Query: 764 RKLSKIDFPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKP 821
RK PW P F+ GQ A G S VN+ E + TR +R
Sbjct: 1628 RKQ-----PWHASSLLAPYRFFDVAGQHSSAPRGNSLVNKAEIEVAIMLYTR-LRTDFPT 1681
Query: 822 ----EQIGVITPYEGQRAFLVQHMQYQGSLPAK----IYQEIEVASVDAFQGREKDLIIM 873
+IG+I Y+ Q + +G+ +K I IE + DAFQGRE ++II
Sbjct: 1682 YDFTGKIGIIVTYKAQL------REMKGTFISKFGPDIADYIEFNTTDAFQGRESEIIIF 1735
Query: 874 SCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
SCVR++ IGFL D RR+NV LTRAK + V+GN LS W L++ K +
Sbjct: 1736 SCVRASPAGTIGFLQDIRRMNVGLTRAKSSLWVLGNASTLSSGRYWKKLVDDAKGRDNYT 1795
Query: 934 EGPLNNL 940
G L ++
Sbjct: 1796 TGNLKSM 1802
>gi|344301279|gb|EGW31591.1| hypothetical protein SPAPADRAFT_51586 [Spathaspora passalidarum NRRL
Y-27907]
Length = 1937
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 245/509 (48%), Gaps = 103/509 (20%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQ------------TGS 549
+LN SQ A+ Q SLIQGPPGTGKT T IV Y L ++ T
Sbjct: 1264 NLNVSQAKAILGTHQSEGFSLIQGPPGTGKTKTILGIVGYSLSQKDEKILDIPGHTPTTD 1323
Query: 550 P--VLVCAPSNIAVDQLTEKIH---------RTGLKVVRV-------------------- 578
P +L+CAPSN AVD+L ++ LKVVR+
Sbjct: 1324 PAKILICAPSNAAVDELVLRLRDGVKNSSGETMNLKVVRLGRSDAINASVRDLTLEELVD 1383
Query: 579 ----------------------CAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKE 616
C + R+A+ + + ++ + EM +L + +
Sbjct: 1384 KELQTKAVDVNIDPTIRQQHSKCIEERDALRARL----VNESLSEKEMTDLEDRLRTVNK 1439
Query: 617 ETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIKF 664
+ EL+ DE+R R + ++NA+ +L A VIC T G+ L L +KF
Sbjct: 1440 KRSELAKRLDEQRERASIAYRTKEIERRNAQARILSQAQVICSTLSGSAHDFLASLSLKF 1499
Query: 665 HSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
+++DE+ Q E ++P+ G + I+VGD QL P V+ + AA QSLF R+
Sbjct: 1500 DKVIVDEACQCVELSAIIPLRYGCRTCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQ- 1558
Query: 725 LGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW--PVPDKP 779
P + L+VQYRMHP++S+FPS FY L++G E L K D PW P P
Sbjct: 1559 -KNHPDSVYLLDVQYRMHPQISQFPSAEFYNSKLKDG----EGMLEKNDRPWHKDPPLTP 1613
Query: 780 MLFYVTQGQEEIAGSGTSYVNRTEASN----VEKITTRFIRCGMKPEQIGVITPYEGQ-R 834
F+ + E S N EA V+K+ T + + +IG+I+PY+ Q R
Sbjct: 1614 YRFFDIVSKHERDDQSRSLFNVEEARVALELVQKLMTILPQDKFR-GRIGIISPYKEQIR 1672
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
+ + ++ G I +I+ +VD FQG+EK++IIMSCVR++ +GFL+D RR+N
Sbjct: 1673 SIKNEFIRRYGR---AIQDDIDFNTVDGFQGQEKEIIIMSCVRASPSGNVGFLSDVRRMN 1729
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
VALTRA+ + ++GN LS+ +W LL
Sbjct: 1730 VALTRARTTLWILGNKDSLSRNNVWRRLL 1758
>gi|212225034|ref|YP_002308270.1| DNA helicase [Thermococcus onnurineus NA1]
gi|212009991|gb|ACJ17373.1| DNA helicase [Thermococcus onnurineus NA1]
Length = 660
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 244/494 (49%), Gaps = 78/494 (15%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A+ A+ P LI GP GTGKT T A ++ Q V++ G VL A SN+AVD
Sbjct: 171 LNASQRRAISQALGSPNFFLIHGPFGTGKTRTLAELIRQEVER-GHKVLATAESNVAVDN 229
Query: 564 LTEKIHRTGLKVVRVCAKSREAI---DSPVSFLA----LHNQIRNMEMNSE--------- 607
L E++ +GLK+VR+ SR + ++ +++L L++++R + + ++
Sbjct: 230 LVERLAESGLKIVRIGHPSRVSKHLHETTLAYLMTKHDLYSELRELRVTAQNLAEKRDTF 289
Query: 608 -----------------------------LKKLLQLKEETGELSSADEKRY---RMLKKN 635
KL++ +L+ +K + R L++
Sbjct: 290 TKPLPKYRRGLTDIEILALSRRRRGTRGVPAKLIREMANWIKLNKLVQKAFDDARKLEER 349
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVG 695
+ ++ ADV+ T AG + + +IDE+ QAT P ++P I AK+ +L G
Sbjct: 350 IAREIIQEADVVLTTNASAGLEVIGYADYDVAIIDEATQATIPSVLIP-INRAKRFVLAG 408
Query: 696 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR-PFRLEVQYRMHPELSKFPSNFFYEGS 754
DH QL P ++ +KA LS++LFE L+ L VQYRM+ L +FP+ FY+G
Sbjct: 409 DHRQLPPTILSEKARE--LSRTLFEGLIERYPEDSAMLTVQYRMNERLMEFPNREFYDGK 466
Query: 755 LQNGVCADERKLSKIDFPWPVPDKP---------MLFYVTQGQ-----EEIAGSGTSYVN 800
++ L+ + P +P +L ++ + E S N
Sbjct: 467 IKAAPGVKCITLTDLGIKCPNFGEPWDEILKAGNVLVFIDTSKHPEKWERQRRGSESREN 526
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
EA V + + + G+KPE IGVITPY+ QR + + + +EIEV +V
Sbjct: 527 PLEARIVAETVEKLLEMGVKPEWIGVITPYDDQRDLI----------SSLVPEEIEVRTV 576
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
D +QGREK++II+S VRSN+ +GFL D RRLNV+LTRAK +IV+G+ + LS +
Sbjct: 577 DGYQGREKEVIILSFVRSNERGEVGFLKDLRRLNVSLTRAKRKLIVVGDSETLSVHSTYK 636
Query: 921 NLLNFYKEQKVLVE 934
+ F K + VE
Sbjct: 637 RFIEFVKAEGRFVE 650
>gi|385305772|gb|EIF49721.1| putative nuclear rna processing factor [Dekkera bruxellensis
AWRI1499]
Length = 1066
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 249/518 (48%), Gaps = 100/518 (19%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQL-----VKQTGS-------- 549
D+N SQ A+ A+ + SLIQGPPGTGKT T ++ V + GS
Sbjct: 396 DVNDSQAVAIAGAVHKEGFSLIQGPPGTGKTKTILGVIGHFLTRMAVARNGSHPIQMPXQ 455
Query: 550 ---------PVLVCAPSNIAVDQLTEKIHRTGLKVVR-VCAKSR---------------- 583
+LVCAPSN AVD+L ++ R G+K + V K R
Sbjct: 456 QVXRSKEHRRILVCAPSNAAVDELVLRLMR-GIKNSKGVIFKPRLVRLGRTDAINEQVKG 514
Query: 584 ----EAIDSPVSFL------ALHNQIRNMEMNSE----------------------LKKL 611
E +DS +S + A+ Q R M + L+ +
Sbjct: 515 ITLEELVDSKLSSVEKIDDNAIREQHRKCIMERDELREKLDSGKLPEXEIAKAEMRLQDV 574
Query: 612 LQLKEETGE-LSSADEKR---YR---MLKKNAEKSLLDNADVICCTCVGAGDPRL--LKI 662
+Q + E G+ L EKR YR + ++N + +L++A+V+C T G+ L + +
Sbjct: 575 VQKRRELGKKLDEIREKRSVSYRNREIERRNIQFKILNDAEVVCSTLSGSAHDVLASMSL 634
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
F +++IDE+ Q TE ++P+ G + ++VGD QL P V+ +KAA QSLF R+
Sbjct: 635 TFDTVVIDEAAQCTELSAIIPLRYGCTKCVMVGDPNQLPPTVLSQKAASYKYEQSLFVRI 694
Query: 723 VV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML 781
+ L VQYRMHPE+S FPS FY L +G E SK PW P
Sbjct: 695 QNNHKXSVYLLNVQYRMHPEISMFPSKEFYHSRLLDGPNMAENN-SK---PWNSLYGPYR 750
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASN----VEKITTRFIR---CGMKPEQIGVITPYEGQR 834
F+ +G EE + S N TEAS VE + +F G+ +G+I+PY+ Q
Sbjct: 751 FFDVKGAEEQNEATKSVFNYTEASLALELVEDLFEKFSEINWAGL----VGIISPYKEQV 806
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
L + + I +I+ +VD FQG+EK++I+ SCV + +H GIGFL D RR+N
Sbjct: 807 KLLKK--LFINRFGRIITTQIDFNTVDGFQGQEKEVIVFSCVXAENHTGIGFLADIRRMN 864
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
VALTRA+ + ++G+ L W +L+ E+ ++
Sbjct: 865 VALTRARSSLWILGSKXALVNNKTWRDLIENATERHLV 902
>gi|340377341|ref|XP_003387188.1| PREDICTED: hypothetical protein LOC100637715 [Amphimedon
queenslandica]
Length = 3261
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 240/506 (47%), Gaps = 83/506 (16%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL----------VKQTGSPVLV 553
+LN Q ++K A++ LIQGPPGTGK+ T A + Y V + S VL
Sbjct: 2753 ELNAIQQDSIKRALRNRFQLIQGPPGTGKSETGAHLAYVFAITNEKMSEEVSKKKS-VLY 2811
Query: 554 CAPSNIAVDQLTEKIH----RTG---LKVVRVCAKSREAIDSPVSFL------------- 593
C PSN +VD + + +H R G L+++R+ +S E D P
Sbjct: 2812 CGPSNKSVDVVHKNLHLLNRRLGSKKLQILRIYGRSHERKDYPDPVFDLTQERTNRDDDD 2871
Query: 594 ------------ALHNQIRNM--EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
+LH +IRN E+ + +L +L ++ S A+ K Y+ L + EK
Sbjct: 2872 DDGRVLEMFRDESLHKRIRNNCPEIVATENRLQELLDQGIIPSLAERKNYKKLITDEEKK 2931
Query: 640 -LLDNADVICCTCVGAGDPRLLKIK--FHSILIDESMQATEPECMVPVILGAKQLILVGD 696
+ N DVI CTC RLL+ K +IDES ATEPE + L + ++L+GD
Sbjct: 2932 EIQKNYDVILCTCNETCSQRLLRSKDILAQCIIDESGMATEPETIAASSL-CEHVVLIGD 2990
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLV-----VLGIRPFRLEVQYRMHPELSKFPSNFFY 751
H QL PVVM A GL SLFE+ R LE+QYRMH + + PS+ FY
Sbjct: 2991 HKQLQPVVMYPPAKECGLGTSLFEKYANQFEKTNDPRLITLELQYRMHSFICQGPSSIFY 3050
Query: 752 EGSLQNGVCADERK--LSKIDFPWPVPDK-PMLFYVTQGQEEIAGS-------GTSYVNR 801
+ L+ ER+ ID W + P++F G E S S N
Sbjct: 3051 DSKLKADQIVKERRPLTQSIDLFWSRGQQHPVMFLKVYGIERSTDSKYSRKVDSHSKCNE 3110
Query: 802 TEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
E V K + + +K + I V+TPYE Q++ ++ ++ L AK ++ + VA++
Sbjct: 3111 QEVKTVLKCIKKLVMNYDVKYKSIAVLTPYEAQKSLVLNTIKNDSVLKAK-WKSLRVATI 3169
Query: 861 DAFQGREKDLIIMSCVRSND-----------------HQGIGFLNDPRRLNVALTRAKYG 903
QG E D++I++ VRS + + +GFL + ++NV +TRA+YG
Sbjct: 3170 VESQGDEYDIVILTTVRSQEVSQIRYKQYVQPDRVWFAENLGFLTNDHQINVGITRARYG 3229
Query: 904 IIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+I+IGN +L P WN L+ Y+ +
Sbjct: 3230 LIIIGNDILLKYDPTWNKLIEIYERE 3255
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 206/525 (39%), Gaps = 125/525 (23%)
Query: 444 SVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFS----- 498
SV FI K + FDR+ AL S+ + +RL+ N P HFS
Sbjct: 1076 SVTFILKYSYFDRLHRAL-------DSLPLAVLNRLMPSN----------PCHFSNVVLN 1118
Query: 499 ----------APNLPDLNRSQVYAVK-----HAIQRPLSLIQGPPGTGKTVTSATIVYQL 543
++ L SQ A+K A + P+ LI G GTGKT A Y++
Sbjct: 1119 NEDIPLPIKCVRDIVKLEYSQRMALKSIMSCEANKAPV-LIVGSFGTGKTQLIARAAYEI 1177
Query: 544 VKQ-TGSPVLVCAPSNIAVDQLTEKIHRTGL-------KVVRVCAKSREAIDSPVSFLAL 595
++Q S VL+CA + D + KVVR+ A +P + +
Sbjct: 1178 LQQDRTSKVLICAHHQHSADTFMANYFSEMIDSGWYCGKVVRLMANRDYC--APSNCVKY 1235
Query: 596 HNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAG 655
+ I++ + KKL Q+ S++ L V+
Sbjct: 1236 YATIQDWQ----FKKLNQISIIVTTFSTS----------------LHMLGVV-------- 1267
Query: 656 DPRLLKIKFHSILIDESMQATEPECMVPVILG--AKQLILVGDHCQLGP--VVMCKKAAR 711
P+ F IL+DE Q EPE + P+ L Q+++ GDH Q+GP +V+ + A +
Sbjct: 1268 -PKDF---FTHILLDEGAQTREPESIAPLCLADDNTQIVIAGDHKQVGPSLLVLGELAIK 1323
Query: 712 AGLSQSLFERLVVL----------GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCA 761
GLS SL ERL +L + L +R H + PS FY+ L A
Sbjct: 1324 NGLSLSLLERLHILYNDERLTDASSVHSATLLTNFRCHHAILSLPSYLFYDSVLITAAEA 1383
Query: 762 DERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC---- 817
+ P P+ F + +A ++ N E + + + + ++
Sbjct: 1384 -------VTHLHPEAKYPLHFICSDL--SVAKEISTNDNEIEVTILLQEISNYVESWPDQ 1434
Query: 818 --GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
M +I V+T Q+ ++Q + + Y +I+V +V QG E + I +S
Sbjct: 1435 WGEMDLSKICVMTVTAHQKIRVIQKLSHH-------YLDIDVRTVFDIQGCEYEAIFLST 1487
Query: 876 VRSNDHQGIGFLNDPRR-------LNVALTRAKYGIIVIGNPKVL 913
+G +P + N ALTRAK ++ GNP +L
Sbjct: 1488 AEPTTKEGKS--KNPTKTPCSQYVFNTALTRAKSLVVCAGNPFLL 1530
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGP--VVMCKKAARAGLSQSLF 719
F ILIDE Q EPE + P+++ K ++++ G+H Q+GP +V+ K + GL SL
Sbjct: 390 FTHILIDEGAQTCEPEALSPLLMANKNTRIVIAGNHQQVGPQLLVLGKAPQQFGLCVSLL 449
Query: 720 ERLV--------VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
+RL+ + + YR +L + PS FY L+ C K +
Sbjct: 450 QRLLEKYKSIGDITKKNTPSWNINYRSQADLLELPSKLFYNSELR--ACGTVSCHPKAPY 507
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE-ASNVEKITTRFIRCGMKPEQIGVITPY 830
P+ +F + +I + V+ + +F +K ++TP
Sbjct: 508 PY-------VFICSSFTNDIPVDAQCALEADRLLQAVQLYSDKFKSWELK--DTCIMTPN 558
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF---- 886
Q + + ++ + K + + V + +G+E ++ MS V S + G F
Sbjct: 559 LKQANLIKELIRTK----FKNLEGVNVITTYEMKGQEYCMLFMSTVESLEPNGRPFDPLK 614
Query: 887 -LNDPRRLNVALTRAKYGIIVIGNPKVL 913
+P N A+TR+K ++ +GNP +L
Sbjct: 615 SFCNPALFNRAITRSKSLVVAVGNPLIL 642
>gi|66804901|ref|XP_636183.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
gi|60464558|gb|EAL62696.1| hypothetical protein DDB_G0289529 [Dictyostelium discoideum AX4]
Length = 1677
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 224/430 (52%), Gaps = 49/430 (11%)
Query: 505 LNRSQVYAVKHA-IQRPLSLIQGPPGTGKTVTSATIVYQLVK-QTGSPVLVCAPSNIAVD 562
LN SQ+ A+K + ++ ++LIQGPPGTGKT T ++ L+ +LVC PS+ +VD
Sbjct: 1193 LNESQLNAIKSSLVESGITLIQGPPGTGKTTTINYLLSVLLAIDKKFKILVCGPSHASVD 1252
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELS 622
+ V + C K+ L QI M ++ E
Sbjct: 1253 E-----------VAKRCLKN---------LLNSDGQIFKPNM---------VRTGRKEKI 1283
Query: 623 SADEKRYRMLKKNAEK--SLLDNADVICCTCVGAGDPRLLK-IKFHSILIDESMQATEPE 679
S + ++ + KN+ + +L+ +A ++ T G+G + + +LIDES Q++EP
Sbjct: 1284 SPECQKISLKNKNSSRRINLIKSASIVFSTLAGSGSKAIFENFSPDIVLIDESTQSSEPT 1343
Query: 680 CMVPVILGA-KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 738
++P+ LG+ K+LILVGD QL P + K+ A GL SLFERL I L QYRM
Sbjct: 1344 SIIPLSLGSVKKLILVGDPVQLPPTIFSKQGADCGLKISLFERLAK-SIDVQFLNTQYRM 1402
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGSGTS 797
HP SKF S FY G+L++G + F + PM F+ + + +++ S
Sbjct: 1403 HPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFFDLPKSNQKVIKK--S 1460
Query: 798 YVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
+N+ E V +++ ++ C K G+ITPY+ Q + ++ Q +
Sbjct: 1461 IMNQDEIDKVFTLIKELIEKYPEC--KKLSFGIITPYKLQ----MNQIKEQLNRSEHHNL 1514
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
I V+++D QG EKD+IIMSCVRS + GIGFL+D RR+NVALTRAK G+ VIG KVL
Sbjct: 1515 NISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRRINVALTRAKLGLYVIGTYKVL 1574
Query: 914 SKQPLWNNLL 923
+K W L
Sbjct: 1575 AKDNTWEKFL 1584
>gi|302506539|ref|XP_003015226.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
gi|291178798|gb|EFE34586.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
Length = 1131
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 242/506 (47%), Gaps = 76/506 (15%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL-FRCHLPKHFSAPNLPDLNRSQVY 511
++ RM + K +S + + L GH L F F P+L N SQ
Sbjct: 607 TYRRMNQTMAKLEKMQESEHSQLIRVLFGHTTPSPLDFESVGTLEFMDPSL---NDSQKE 663
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ QLV Q VLVC PSNI+VD + E++
Sbjct: 664 AIRFALASREIALIHGPPGTGKTHTLIELIRQLV-QRKKRVLVCGPSNISVDNIVERLAL 722
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
+ +VR+ +R +D + L+ ++ ++++ + K+ K G
Sbjct: 723 HKVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERR 782
Query: 624 A---DEKRYRMLKKNAEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A D K R + E +DN + V+ T GAG +L KF +LIDE+ QA
Sbjct: 783 AIYGDLKELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDIVLIDEASQAR 842
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA---RAG-------------------- 713
E +C +P +L A +++L GDH QL P + K ++ R G
Sbjct: 843 EAQCWIP-LLPASRVVLAGDHLQLPPTIKSKSSSNSDRTGSALWDKEDLHFNELSNTFDL 901
Query: 714 --LSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
L +LF+RL+ L GI+ L QYRMH ++ FPS+ YE L ER L
Sbjct: 902 RNLEITLFDRLLSLHGTGIKRM-LTTQYRMHQKIMDFPSDELYESKLIAADAVRERLLK- 959
Query: 769 IDFPWPVPD-----KPMLFYVTQG----QEEIAGSGTSY--------VNRTEASNVEKIT 811
D P+ V D +P++FY TQG ++ +G S N EA+ V +
Sbjct: 960 -DLPYEVEDTDDTREPLVFYDTQGGDFPEKSPDSNGISAKSLLVESKCNDMEAAVVARHV 1018
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
G++PE I VITPY Q A L Q ++ + + +E+ SVD FQGREK+ +
Sbjct: 1019 ENLASAGVRPEDIAVITPYNAQVALLSQLLKEK-------FPTLELGSVDGFQGREKEAV 1071
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVAL 897
++S VRSN +GFL + RRLN +
Sbjct: 1072 VVSLVRSNPDHEVGFLGEKRRLNAVM 1097
>gi|398345459|ref|ZP_10530162.1| DNA and RNA helicase [Leptospira inadai serovar Lyme str. 10]
Length = 627
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 229/447 (51%), Gaps = 35/447 (7%)
Query: 503 PDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P+LN SQ A+ +Q L L+ GPPGTGKT T + LV + G +L AP+N A
Sbjct: 173 PELNDSQRRAISAILQTEDLILLHGPPGTGKTKTITEAIRILVDR-GKKILASAPTNAAT 231
Query: 562 DQLTEKIHRTGLKVVRVC--AKSREAIDSPVSF---LALHNQIRNMEMNSE-----LKKL 611
D L E + R G+ +R+ A+ E++ S VS L H + +E + + LKK
Sbjct: 232 DLLAESLGRMGVSALRIGHPARMSESVLS-VSLDANLNRHPDFKLIERDKKEIGELLKKA 290
Query: 612 LQLKEETGELSSADEKRYRMLKKNAEKS-----------LLDNADVICCTCVGAGDPRLL 660
+ K G + D KR K K LL++ VI CT GA L
Sbjct: 291 GKYKRTFGREEAEDRKRLYQEAKELRKGIRERQKILVRYLLESHPVIVCTHTGASSSLLD 350
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAA-RAGLSQSLF 719
K+ F ++DE QATEP +P IL A+++++ GD QL P V+ + + L + L
Sbjct: 351 KLNFDYAVLDEGSQATEPASWIP-ILRAERIVIAGDPRQLPPTVLSEDPLLKIPLMERLL 409
Query: 720 ERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
+ + +G R + L+ QYRM + FP+ FY G L +G+ + R + P+
Sbjct: 410 DSMDSIG-RVYLLDTQYRMTDPIQSFPNRRFYAGRLVSGIPEEIRSANPFPSETPLFGSS 468
Query: 780 MLFYVTQGQ---EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAF 836
+F T G EE+ + S NR EA I R + G PE + +I+PY QR F
Sbjct: 469 FVFIDTSGTDSGEELFDA--SLGNRWEAEFTITILKRILESGWLPEDLVLISPYRYQR-F 525
Query: 837 LVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVA 896
L++ + + LP + + IE+ +VD+FQGREK +I S VRSN IGFL++ RR NV
Sbjct: 526 LLEEI-LRKELPI-VGETIEIETVDSFQGREKKGVIFSLVRSNSEGNIGFLSEERRWNVG 583
Query: 897 LTRAKYGIIVIGNPKVLSKQPLWNNLL 923
+TRAK +++IG+ L +Q + +L+
Sbjct: 584 MTRAKRLLVLIGDGSTLGEQEFFQDLI 610
>gi|86160632|ref|YP_467417.1| superfamily I DNA/RNA helicase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85777143|gb|ABC83980.1| Superfamily I DNA and RNA helicase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 619
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 211/437 (48%), Gaps = 58/437 (13%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQT---GSPVLVCAPSNIAVDQLTEKIHRTGLKVVR 577
L+L+ GPPGTGKT T++ +++++ G VL APSN+AVD L E++ GL VR
Sbjct: 194 LALVHGPPGTGKT----TVLVEVIRRAAARGETVLAAAPSNLAVDNLVERLAAAGLACVR 249
Query: 578 VCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET----------------GEL 621
V +R + L H +E + + L ++ G
Sbjct: 250 VGHPAR-----VLPGLLEHTLEARVEAHEAARIAQDLVDQALALRRDARKRRKKRGPGRF 304
Query: 622 SSADEKR---------YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDES 672
S++ E+ R L+ AE +L+ A V+ T P L +F ++DE+
Sbjct: 305 SASREQEREARALLAEARRLEARAEAEVLERAQVVLATLTSLDAPALAGRRFALAVVDEA 364
Query: 673 MQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRP-F 730
QA EP + +L A + +L GDH QL P V+ A GL SLFERLV G R
Sbjct: 365 TQAVEPAAYL-ALLRADRAVLAGDHLQLPPTVLSAAAQAGGLGVSLFERLVEAHGDRARV 423
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG--- 787
L Q+RM+ + FPS Y G+L+ A R + D P+ T G
Sbjct: 424 MLAEQHRMNARIMAFPSEALYGGALRAHPAAAGRAID---------DAPLELVDTSGRGF 474
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
+EE S N EA R + G+ P + VI+PY+ Q VQ ++ L
Sbjct: 475 EEETPEGSDSKQNAGEAELAASEVRRLLAAGLAPADVAVISPYDAQ----VQRLRQL--L 528
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
++ +EV +VD FQGREK+ +++S VRSN+ +GFL D RR+NVALTRA+ ++V+
Sbjct: 529 ADELEAGLEVDTVDGFQGREKEAVVVSLVRSNEAGEVGFLADVRRMNVALTRARAKLVVV 588
Query: 908 GNPKVLSKQPLWNNLLN 924
G+ +S+ P + + L
Sbjct: 589 GDGSTVSRHPFYRSFLE 605
>gi|57640113|ref|YP_182591.1| UvrD/REP family DNA helicase [Thermococcus kodakarensis KOD1]
gi|57158437|dbj|BAD84367.1| DNA helicase, UvrD/REP family [Thermococcus kodakarensis KOD1]
Length = 661
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/497 (32%), Positives = 246/497 (49%), Gaps = 84/497 (16%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A+ A+ L+ GP GTGKT T ++ Q V + G VL A SN+AVD
Sbjct: 176 LNASQRGAIAKALGSGDFFLVHGPFGTGKTRTLVELIRQEVAR-GHKVLATAESNVAVDN 234
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE--- 620
+ E++ +GLKVVR+ SR + + L I ++ +EL++L + E E
Sbjct: 235 IVERLADSGLKVVRIGHPSR--VSKALHETTLAYLITQHDLYAELRELRVIGENLKEKRD 292
Query: 621 ------------LSSADEKRY------------RMLKKNAE------------------- 637
LS + R R++++ AE
Sbjct: 293 TFTKPAPKYRRGLSDREILRLAEKGIGTRGVPARLIREMAEWIRINQQVQKTFDDARKLE 352
Query: 638 ----KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ ++ ADV+ T AG + ++ +IDE+ QAT P ++P I AK+ +L
Sbjct: 353 ERIAREIIQEADVVLTTNASAGLEVVDYGEYDVAVIDEATQATIPSVLIP-INRAKRFVL 411
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYE 752
GDH QL P ++ +KA LS++LFE L+ + L VQYRM+ L +FPS FY+
Sbjct: 412 AGDHKQLPPTILSEKAKE--LSKTLFEGLIERYPEKSEMLTVQYRMNERLMEFPSREFYD 469
Query: 753 G------SLQNGVCADERKLSKIDFP--WPVPDKP---MLFYVTQGQE---EIAGSGT-S 797
G S++N AD +S+ +F W KP ++F T +E E G+ S
Sbjct: 470 GKIKAHESVKNITLAD-LGVSEPEFGNFWDEALKPENVLVFIDTSKREDRFERQRRGSDS 528
Query: 798 YVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
N EA V + + + G+KP+ IGVITPY+ QR + + + ++IEV
Sbjct: 529 RENPLEAKLVTETVEKLLEMGVKPDWIGVITPYDDQRDLI----------SSMVGEDIEV 578
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
+VD +QGREK++I++S VRSN +GFL D RRLNV+LTRAK +I +G+ LS P
Sbjct: 579 KTVDGYQGREKEIIVLSFVRSNRRGELGFLTDLRRLNVSLTRAKRKLIAVGDSSTLSNHP 638
Query: 918 LWNNLLNFYKEQKVLVE 934
+ + F +E+ +E
Sbjct: 639 TYRRFIEFVRERGTFIE 655
>gi|404449013|ref|ZP_11014005.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
gi|403765737|gb|EJZ26615.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
Length = 642
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 160/521 (30%), Positives = 251/521 (48%), Gaps = 55/521 (10%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 504
+D ++ S+ M++AL + D S + LLG E F + +
Sbjct: 130 IDLLFDEASYREMEIALLAVSKADNSRLGELKRVLLGEK--EAAF-----QQLELIAIDR 182
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN Q AV A + L++I GPPGTGKT T + + + +T S VLVCAPSN AVD
Sbjct: 183 LNSRQNEAVAMASKATDLAIIHGPPGTGKTTTLVAAIEKSL-ETNSQVLVCAPSNAAVDL 241
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSS 623
L EK+ + +R+ +R ++ + L +I N +LK+L + +E ++
Sbjct: 242 LVEKLSERNISALRMGHPAR--VEEQILLQTLDAKIANHASYKDLKRLKKSIDELVKMGK 299
Query: 624 ADEKRY----RMLKK----------NAEKSLLD--------NADVICCTCVGAGDPRLLK 661
++ + RM ++ + KSL D ++ VI CT VGA L
Sbjct: 300 KYKRSFGHEERMQRRRYFEEADRCRDEAKSLEDYIVYDIFQSSQVIACTLVGAASSYLKS 359
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F + IDE+ Q E +P I AK++++ GDH QL P + +A+++GL +LFE+
Sbjct: 360 FSFPVVFIDEAGQGLEAATWIP-IQKAKKVVMAGDHLQLPPTIKSFEASKSGLGITLFEK 418
Query: 722 LVVLG-IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM 780
++ L QYRMH + F + FY+G L + + ++P+
Sbjct: 419 AILRQPSSAVMLREQYRMHELIMGFSNRHFYQGELMAAPNTQAH--------YILEEEPV 470
Query: 781 LFYV-TQGQ---EEIAGSGTSYVNRTEASNVEKITTRFI-RCGMKPEQ-----IGVITPY 830
L +V T G E++ S N EA F+ R G++ + IG+I PY
Sbjct: 471 LEFVDTSGSGYNEQVEEESLSTYNLEEARFALNYLESFVKRIGLRQLKEREFSIGLIAPY 530
Query: 831 EGQRAFLVQHMQYQGSLP-AKIYQE-IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
Q L + + P + Y E + + S+D FQGRE+D++++S VRSN IGFL
Sbjct: 531 RAQVRRLNELLFDTYEFPNLRSYSEFLTIDSIDGFQGRERDVMLISLVRSNAKGEIGFLA 590
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
D RR+NVALTRAK +IVIG+ LS + L++ +E+
Sbjct: 591 DTRRMNVALTRAKRKMIVIGDSATLSSHSFYTAFLDYVEEK 631
>gi|449673530|ref|XP_002155829.2| PREDICTED: putative helicase Mov10l1-like [Hydra magnipapillata]
Length = 1137
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 175/558 (31%), Positives = 256/558 (45%), Gaps = 121/558 (21%)
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFS------ 498
V+F + T R A+ +FA+ H +EVLF ++ K +
Sbjct: 518 VEFYFNRTPLRRFHQAI-EFAI---------------HLGEEVLFPVNVEKKYPLVDFSK 561
Query: 499 ---APNLPDLNRSQVYAVKHAIQ---RPLSLIQ-GPPGTGKTVTSATIVYQL-VKQTGSP 550
P LN+ Q+ AV+ + RPL I GPPGTGK+VT V Q+ K S
Sbjct: 562 TAFKPFNKTLNKRQIDAVQRIVAGCGRPLPYILFGPPGTGKSVTVVESVLQIFTKIKHSR 621
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS 606
+LVCAPSN A D + E++H +G+ +VR+CA R ++ P + +
Sbjct: 622 ILVCAPSNSAADLIVERLHNSGVLNKSDMVRLCAFQRSMLNLPECIVQYY---------- 671
Query: 607 ELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK--- 663
++ +D Y + + +I TC AG +K
Sbjct: 672 --------------VNDSDNISYAIRLR-----------IIVTTCSMAGFLYSFNLKSGH 706
Query: 664 FHSILIDESMQATEPECMVPVILGA----KQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
F I +DE+ QATEPEC+VPV A Q++L GD QLG V+ A GL S
Sbjct: 707 FTHIFVDEAGQATEPECLVPVGFAAGCDESQIVLAGDPFQLGAVLRSDVANEYGLGISYL 766
Query: 720 ERLVVL--------------GIRPF---RLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD 762
ERL L G P +L YR H L + SN FY L CAD
Sbjct: 767 ERLTFLKLYERNEKDYFDVGGYNPLVITKLVNNYRSHASLLRLSSNIFYNRELIP--CAD 824
Query: 763 ERKLSKIDFPWPVPDK--PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI--RCG 818
ERK++K + +P+K P +F+ +G++ G+ SY N EA V K + +C
Sbjct: 825 ERKVNKFVGAFFLPNKEVPFVFHGVRGEDFREGNSPSYFNPAEAVQVLKYVQIIMGEQC- 883
Query: 819 MKPEQIGVITPYEGQ----RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
++ + IG+ITPY+ Q RA L Q +I+V SV+ FQG+E++ II+S
Sbjct: 884 LQQDDIGIITPYKKQVEKIRALLDQFD----------LNDIKVGSVEEFQGQERECIIIS 933
Query: 875 CVRSND-------HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
VRS + IGFL++P+R NVA+TR++ +I++GNP VL W +L +
Sbjct: 934 TVRSKEDLVDFDIRHNIGFLSNPKRFNVAITRSQSLLIIVGNPIVLCYDAHWCAMLQYAV 993
Query: 928 EQKVLVEGPLNNLKESLI 945
L +L+ SLI
Sbjct: 994 INSCYCGVDLPSLQNSLI 1011
>gi|169609334|ref|XP_001798086.1| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
gi|160701819|gb|EAT85222.2| hypothetical protein SNOG_07756 [Phaeosphaeria nodorum SN15]
Length = 1955
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 198/367 (53%), Gaps = 20/367 (5%)
Query: 603 EMNSELKKLLQLKEETGEL--SSADEKRYR-----MLKKNAEKSLLDNADVICCTCVGAG 655
++ S+L L Q K G +S DE+R + + ++ A++++L++A +IC T G+G
Sbjct: 1440 KLESDLFALRQRKAALGRQIDNSKDEERLQSRNSDLSRRRAQEAILNDAHIICATLSGSG 1499
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L I+F +++IDE+ Q E ++P+ G + +LVGD QL P V K A+R
Sbjct: 1500 HEMFQGLSIEFETVIIDEAAQCVELSALIPLKYGCAKCVLVGDPKQLPPTVFSKVASRHQ 1559
Query: 714 LSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
SQSLF R+ L + QYRMHPE+S FPS FY+G L +G D + K +
Sbjct: 1560 YSQSLFARMEKNHPNDVHLLDTQYRMHPEISLFPSREFYDGKLMDG--GDMATIRKQPWH 1617
Query: 773 WPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI----TTRFIRCGMKPEQIGVIT 828
+ P F+ GQ+ A G S +NR E K+ T+ F + +IG+IT
Sbjct: 1618 QSMLFGPYRFFDVAGQQSAAPKGHSLINRAEIEVAMKLYHRLTSDFPDYNFRG-KIGIIT 1676
Query: 829 PYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN 888
PY+ Q L ++ A+I ++IE + DAFQGRE ++II SCVR++D G+GFL
Sbjct: 1677 PYKSQLTEL--KTRFASVYGAQIIEDIEFNTADAFQGRESEIIIFSCVRASDRGGLGFLE 1734
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN-LKESLILF 947
D RR+NV LTRAK + V+G+ LS+ W L+ +E+K G L L + F
Sbjct: 1735 DIRRMNVGLTRAKSSMWVLGHAPSLSRGEFWRGLVEDAQERKRFTTGNLTQMLNQHSSKF 1794
Query: 948 SKPKQYF 954
PK+ +
Sbjct: 1795 PAPKEGY 1801
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 21/93 (22%)
Query: 504 DLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIV-------------------YQL 543
++N++Q A+K AI +LIQGPPG+GKT T IV Q
Sbjct: 1266 NVNKAQAKAIKSAIDNDAFTLIQGPPGSGKTKTITAIVGAVLSDSLRNRGTTITVPGQQR 1325
Query: 544 VKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVV 576
+ +LVCAPSN AVD+L + + G+K +
Sbjct: 1326 SETASKKLLVCAPSNAAVDELVMRF-KAGIKTL 1357
>gi|13811296|gb|AAK40099.1|AF339908_1 RNA helicase SDE3 [Arabidopsis thaliana]
Length = 1002
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 274/595 (46%), Gaps = 102/595 (17%)
Query: 390 LMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIW 449
L+ GD + +R++YD + G V ++ DEV L+ S A + ++V F +
Sbjct: 295 LVHGDFIFVRHAYDDGTDHAYQGFVHRVE---ADEVHLKFASEFHQRHTAGSVYNVRFTY 351
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
+ R+ A+ + D + +++ L R K F P P LN Q
Sbjct: 352 NRINTRRLYQAVDAAEMLDPN---FLFPSLHSGK------RMIKTKPF-VPISPALNAEQ 401
Query: 510 VYAVKHAIQ---RPLSLIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLT 565
+ +++ + P +I GPPGTGKT+T + QL Q + VLVCAPSN A D +
Sbjct: 402 ICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHIL 461
Query: 566 EKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSAD 625
EK+ +C + D+ + +N+ + ++K E D
Sbjct: 462 EKL---------LCLEGVRIKDNEI-----------FRLNAATRSYEEIKPEIIRFCFFD 501
Query: 626 E-----------KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
E RY+++ + L NA+ + + F IL+DE+ Q
Sbjct: 502 ELIFKCPPLKALTRYKLVVSTYMSASLLNAEGV------------KRGHFTHILLDEAGQ 549
Query: 675 ATEPECMVPV---ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-----VLG 726
A+EPE M+ V L ++L GD QLGPV+ + A GL +S ERL G
Sbjct: 550 ASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEG 609
Query: 727 IRPF--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLF 782
+ +L YR HPE+ PS FY+G L + L+ ++F +P+K PM+F
Sbjct: 610 DENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEETDSVLASLNF---LPNKEFPMVF 666
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR--CGMKPEQIGVITPYEGQRAFLVQH 840
Y QG +E G+ S+ NR E S V + R C ++ E IGVITPY Q
Sbjct: 667 YGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDC-VQEEDIGVITPYRQQV------ 719
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-------IGFLNDPRRL 893
M+ + L E++V SV+ FQG+EK +II+S VRS +GFL++PRR
Sbjct: 720 MKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRF 779
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLL------NFYK-----EQKVLVEGPL 937
NVA+TRA +++IGNP ++ K WN LL N Y+ EQ+ VE P
Sbjct: 780 NVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEEPF 834
>gi|340381252|ref|XP_003389135.1| PREDICTED: hypothetical protein LOC100632129, partial [Amphimedon
queenslandica]
Length = 3316
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 159/509 (31%), Positives = 241/509 (47%), Gaps = 85/509 (16%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVY-------QLVKQTGSP----VL 552
+LN Q ++K A++ LIQGPPGTGK+ T A + Y ++ K+ + VL
Sbjct: 2802 ELNPIQQDSIKRALRNRFQLIQGPPGTGKSETGAHLAYIFSITNKEISKEDPTSFFKSVL 2861
Query: 553 VCAPSNIAVD-------QLTEKIHRTGLKVVRVCAKSREAIDSPVSFL------------ 593
C PSN +VD L EK+ LK++R+ ++ E +D P
Sbjct: 2862 YCGPSNKSVDVVHKNLHLLNEKLGSKKLKILRIYGRTHERMDCPDPVFVLTQERAERDDN 2921
Query: 594 ------------ALHNQIRNM--EMNSELKKLLQLKEETGELSSADEKRYR-MLKKNAEK 638
+LH IR E+ + KL +L ++ SS + K Y+ M+ + ++
Sbjct: 2922 DGGRVLEEFRNESLHIIIRQNFPEIRATETKLQKLLSQSIIPSSTERKNYKDMITSSEKR 2981
Query: 639 SLLDNADVICCTCVGAGDPRLLKIK--FHSILIDESMQATEPECMVPVILGAKQLILVGD 696
+ +N DVI CTC RLL K +IDES ATEPE + L + ++L+GD
Sbjct: 2982 EIQNNYDVILCTCNETCSQRLLSSKDILAQCIIDESGMATEPETIAASSL-CEHVVLIGD 3040
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIR------PF--RLEVQYRMHPELSKFPSN 748
H QL PV+ A GL SLFER R P+ LE+QYRMH + + PS+
Sbjct: 3041 HKQLQPVIKYPPAKECGLGTSLFERYANQFERCAESQDPYLITLELQYRMHSFICQGPSS 3100
Query: 749 FFYEGSLQNGVCADERK--LSKIDFPWPVPDK-PMLFYVTQGQEEIAGS-------GTSY 798
FY L+ ER+ ID W + P+LF G E+ S S
Sbjct: 3101 IFYNSKLKADQIVKERRPLTQSIDLFWSRGQQYPVLFLKVYGVEKFTDSKYSKKVDSHSK 3160
Query: 799 VNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
N EA V K T+ + ++ E I V+TPY Q+ +V ++ L K ++ + V
Sbjct: 3161 CNEQEAKAVLKYITKLVMNHDVEHESIAVLTPYGAQKNLVVDMIKNDPVLKTK-WKSLRV 3219
Query: 858 ASVDAFQGREKDLIIMSCVRSND-----------------HQGIGFLNDPRRLNVALTRA 900
A++ QG E D++I++ VRS + +GFL D ++NV +TRA
Sbjct: 3220 ATIVESQGDEYDIVILTTVRSQKLSEISHKEYIQPDRRWLTENLGFLTDDHQINVGITRA 3279
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+YG+I+IGN ++L WN L+ FY+++
Sbjct: 3280 RYGLIIIGNDRLLRYDKTWNRLIKFYEDK 3308
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 211/528 (39%), Gaps = 96/528 (18%)
Query: 427 LELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG----H 482
L L ++ G E + +V FI K + FDR+ AL S+ + +RL+ H
Sbjct: 1082 LGLTTNPGVKQE--SNVNVTFILKYSYFDRLHRAL-------DSLPPAVLNRLMPNDPCH 1132
Query: 483 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK-----HAIQRPLSLIQGPPGTGKTVTSA 537
+ VL +P ++ L SQ A+K A + P+ LI G GTGKT A
Sbjct: 1133 FSNVVLNDEDIPPIKCVRDIVKLEYSQRKALKSIMSCEANKAPV-LIIGSFGTGKTQLLA 1191
Query: 538 TIVYQLVKQT-GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALH 596
YQ+++Q + +L+CA + D + C K
Sbjct: 1192 RAAYQVLQQNRKNRILICAHHQRSADTFMANYFSKMIDSGWRCGKV-------------- 1237
Query: 597 NQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
+R + M E SS E + ++ L N +I T + +
Sbjct: 1238 --VRLVPM------------EYHPPSSCVEYYVTITDIKCSRNELQNISLIVTTFSSSLN 1283
Query: 657 PRLLKIK----FHSILIDESMQATEPECMVPVIL--GAKQLILVGDHCQLGP--VVMCKK 708
LL + F IL+DE Q EPE + P+ L G Q+++ GDH Q+GP +V+ +
Sbjct: 1284 --LLGVVPKGFFSHILLDEGAQTREPESVAPLCLADGNTQIVIAGDHKQVGPSLLVLGEL 1341
Query: 709 AARAGLSQSLFERLVVL----------GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG 758
A + GLS SL ERL L + L +R H + PS FY+ +L
Sbjct: 1342 AIKNGLSLSLLERLHTLYNDDRLSDASSVHSATLLTNFRCHHAILSLPSYLFYDSALITA 1401
Query: 759 VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC- 817
A + P P+ F + E A S + E + + +++++
Sbjct: 1402 AEA-------VTHLHPEAKYPLHFICSDLSE--AKEVHSNTDEFEVRLLLQELSKYVKSW 1452
Query: 818 -----GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
M +I V+T Q+ ++Q + Y +++I+V +V QG E + I
Sbjct: 1453 PNQWGKMDLSKICVMTTTAHQKIRVIQVLSYD----YLNFEDIDVRTVFDIQGCEYEAIF 1508
Query: 873 MSCVRSNDHQGIGFLNDPRR-------LNVALTRAKYGIIVIGNPKVL 913
+S +G +P + N ALTRAK ++ GNP +L
Sbjct: 1509 LSTAEPTTREGKS--KNPTKTPCSQYVFNTALTRAKSLVVCAGNPFLL 1554
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 33/268 (12%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGP--VVMCKKAARAGLSQSLF 719
F ILIDE Q EPE + P ++ K ++++ GDH Q+GP +V+ K + GL SL
Sbjct: 338 FTHILIDEGAQTREPEALSPFLMANKNTRIVIAGDHQQVGPQILVLGKAPQQFGLCVSLL 397
Query: 720 ERLV--------VLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
+RL+ + + YR ++ + PS FY L R ++ +
Sbjct: 398 QRLLEKYKSIGDITKRNTPSWNINYRSQADILELPSKLFYNSEL--------RACGRVPY 449
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE-ASNVEKITTRFIRCGMKPEQIGVITPY 830
P P +F + +I V V+ + +F +K ++TP
Sbjct: 450 HLKAP-YPYVFICSSFTNDIPVDAQCAVEADRLLQAVQLHSDKFKSWDLK--DTCIMTPS 506
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF---- 886
Q + + ++ + + + + V + QG+E ++ MS V S + G F
Sbjct: 507 LKQANLIKKLIRTKFN----NLEGVNVITSYQMQGQEYRMLFMSTVESLEPNGRPFDPLK 562
Query: 887 -LNDPRRLNVALTRAKYGIIVIGNPKVL 913
+P N A+TR+K ++ +GNP VL
Sbjct: 563 SFCNPALFNTAITRSKSLVVAVGNPLVL 590
>gi|147846685|emb|CAN80641.1| hypothetical protein VITISV_016912 [Vitis vinifera]
Length = 649
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 228/451 (50%), Gaps = 38/451 (8%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+L+RSQ + A+ + + L+ GPPGTGKT T I+ Q VK+ G+ +L CA SNIAVD
Sbjct: 198 NLDRSQKDXISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKR-GAKILACAASNIAVD 256
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNMEMNSELKKLL 612
+ E++ +K+VR+ +R A+D+ V L N IR EM + KLL
Sbjct: 257 NIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRK-EMKALNGKLL 315
Query: 613 QLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ K+ E LS + KR ++ A ++ NA+V+ T GA +L I
Sbjct: 316 KTKDKNTRRDIRKELKTLSKEERKRQQL----AVTDVIKNANVVLTTLTGAVSRKLENIS 371
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA E C + ++ G++ IL GDH QL P + +A + GL ++LFERL
Sbjct: 372 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLA 430
Query: 724 VL-GIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID--FPWPVPDKP 779
L G L VQYRMH + + S Y + LS ++ +
Sbjct: 431 DLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSSSTEST 490
Query: 780 MLFYVTQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
+L T G EE S +N EA R + G++ IG+ITPY Q L
Sbjct: 491 LLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVVLL 550
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
L +++E+++VD FQGREK+ II+S RSN + +GFL+D RR+NVA+
Sbjct: 551 KMMKNNDDKL-----KDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAV 605
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
TRA+ ++ + + ++ L+ +++E
Sbjct: 606 TRARRQCCLVCDTETVTSDKFLKRLIEYFEE 636
>gi|320164041|gb|EFW40940.1| immunoglobulin mu binding protein 2 [Capsaspora owczarzaki ATCC
30864]
Length = 679
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/457 (33%), Positives = 232/457 (50%), Gaps = 38/457 (8%)
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV--LVCAPS 557
P L D+ RS V A ++LI GPPGTGKT T ++ Q+V + G V L C PS
Sbjct: 223 PGLNDVQRSAVSFCLAA--SDVALIHGPPGTGKTTTIVELINQIVMRHGPEVKILACGPS 280
Query: 558 NIAVDQLTEK-IHRTGLKVVR----------VCAKSREAIDSPVSFLALHNQIRNMEMNS 606
N++VD + E+ + VVR V A S E++ + L I+ EM++
Sbjct: 281 NVSVDNIVERLVASNKTSVVRLGHPARMLPSVLAHSLESVMAASDAGKLVADIKR-EMDA 339
Query: 607 ELKKLLQL--KEETGELSSADEKRYRMLKKNAEKSL---LDNADVICCTCVGAGDPRLLK 661
KKL + ++E EL + + + LKK S+ L + V CCT GA +
Sbjct: 340 ATKKLARPIPRQERKELYNELKNLRKELKKRERDSVQQVLQSTQVTCCTLTGAMSKMIAS 399
Query: 662 --IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
I + ++IDE+ Q+ E C + ++ G K+L+L GDH QL P ++ A + GLS +LF
Sbjct: 400 SPINYDWVIIDEAPQSMEVHCWMAILKG-KRLVLAGDHKQLPPTILSDAAEKKGLSLTLF 458
Query: 720 ERLV-VLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
+RL+ G + R L VQYRM+ ++ ++ SN Y G L + L ++ +
Sbjct: 459 DRLIKAYGDQVTRMLTVQYRMNAKIMQWSSNEMYGGKLTSAPSVQAHLLCELPRVKKTEE 518
Query: 778 -KPMLFYV-TQG---QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
+ LF++ T G E A S N EA V + R + G+ + VITPY
Sbjct: 519 TESALFFIDTTGCSLYETEAADDESKSNEGEADVVVQHVKRLLDAGVTERDMAVITPYNA 578
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
Q L + Q Y ++E+ SVD FQGREK+ +++S VRSND + +GFL + RR
Sbjct: 579 QVGRLRSKLSVQ-------YPQLEIGSVDGFQGREKEAVVISLVRSNDKREVGFLAEHRR 631
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
LNVA+TRA+ + VIG+ +S L+++ E
Sbjct: 632 LNVAITRARRHVCVIGDSDTVSNDKFLGRLVDWLCEH 668
>gi|452987618|gb|EME87373.1| hypothetical protein MYCFIDRAFT_26275 [Pseudocercospora fijiensis
CIRAD86]
Length = 694
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 249/501 (49%), Gaps = 84/501 (16%)
Query: 486 EVLFRCHLPKHFSAPNL--------PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTS 536
+VLF P S +L P LN SQ A++ A+ + + LI GPPGTGKT T
Sbjct: 175 QVLFGRSSPTAVSDSDLKAEIQWSDPTLNDSQKEAIQFALASQEVVLIHGPPGTGKTHTL 234
Query: 537 ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVR----------VCAKSREAI 586
++ QL+KQ +LVC PSNI+VD + E++ + +VR V S E +
Sbjct: 235 IELILQLLKQK-LRLLVCGPSNISVDNIIERLAPHKVSMVRLGHPARLLPSVINHSMEVL 293
Query: 587 DSPVSFLALHNQIRNMEMNSE---LKKLLQLKEET---GELSSADEKRYRMLKKNAEKSL 640
+ A+ IR+ EM+S+ ++K +E GEL K YR + + L
Sbjct: 294 TNTSDAAAIVTDIRS-EMDSKQASIRKTRNGRERKAIYGELKDL-RKEYREREGRVVREL 351
Query: 641 LDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL-GAKQLILVGDHCQ 699
L + V+ T G+G +L +F +++DE+ QA E +C +PV+ GA +L+L GDH Q
Sbjct: 352 LQQSQVVLSTLHGSGGFQLKDQEFDVVIVDEASQALEAQCWIPVLTSGASKLVLAGDHLQ 411
Query: 700 LGPVV-------MCKKAARAGLSQ-------------------SLFERLVVLGIRPFR-- 731
L P + K A+A L+ +LF+RL+ L +
Sbjct: 412 LPPTIKSSNSKDTTKALAKASLTDQKSTGGAAKAKDDDVHLETTLFDRLLKLHGNKIKRM 471
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD-----KPMLFYVTQ 786
L QYRMH ++ +FPS+ Y L R L D P+ V +P++F+ TQ
Sbjct: 472 LTTQYRMHEKIMQFPSHALYGDKLIAADAVKSRLLK--DLPYGVAGNDNTIEPLIFFDTQ 529
Query: 787 G---------QEEIAGSGT----SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
G ++ + G + S VN EA V + + G+K + I V+TPY GQ
Sbjct: 530 GGDFPEKTEAEDTVKGKSSLLAESKVNEAEALIVREHIINLVNSGVKADDIAVVTPYNGQ 589
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRL 893
A L Q ++ Q +P +E+ SVD FQGREK+ +I+S VRSN +GFL++ RRL
Sbjct: 590 LALLSQMLKEQ--VPG-----LELGSVDGFQGREKEAVIVSLVRSNAEHEVGFLSEKRRL 642
Query: 894 NVALTRAKYGIIVIGNPKVLS 914
NVA+TR K + VIG+ + +S
Sbjct: 643 NVAMTRPKRQLCVIGDSETIS 663
>gi|448521196|ref|XP_003868449.1| Sen1 helicase [Candida orthopsilosis Co 90-125]
gi|380352789|emb|CCG25545.1| Sen1 helicase [Candida orthopsilosis]
Length = 1946
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 246/511 (48%), Gaps = 101/511 (19%)
Query: 502 LPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSPV-------- 551
L D+N SQ A+ + Q SLIQGPPGTGKT T IV Y L T V
Sbjct: 1269 LYDVNMSQAKAIIGSYQSEGFSLIQGPPGTGKTKTILGIVGYSLSHGTNEKVIEMPSKSS 1328
Query: 552 --------LVCAPSNIAVDQLTEKIHRTG----------LKVVRVCAKSREAIDSPVSFL 593
L+CAPSN AVD+L ++ R G LKVVR+ +AI+ V L
Sbjct: 1329 SPPSKAKILICAPSNAAVDELVVRL-RNGVKNSKGEHMPLKVVRLGRS--DAINPAVKDL 1385
Query: 594 ALHN------QIRNME------MNSEL----------------------------KKLLQ 613
L Q + +E + SEL +KLL+
Sbjct: 1386 TLEELVDKELQTKQVEVVTDPNLRSELNKMTQERDRLRSRLNDETLDPKEKDGVQQKLLE 1445
Query: 614 LKEETGELSSA-DEKRYR---------MLKKNAEKSLLDNADVICCTCVGAGDPRL--LK 661
+ ++ EL+ D++R R + ++N + +L A+++C T G+ + L
Sbjct: 1446 INKQRSELTKKLDDQRERSSIAYRNKEIDRRNIQARILSEANILCATLSGSAHDLVANLS 1505
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
+ F ++IDE+ Q E ++P+ G K+ I+VGD QL P V+ + AA QSLF R
Sbjct: 1506 VTFDQVIIDEACQCLESAAIIPLRYGCKKCIMVGDPNQLPPTVLSQSAASLNYDQSLFVR 1565
Query: 722 LVV-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV--PDK 778
+ + L QYRMHP +SKFPS FY+ L +G E+ PW + P
Sbjct: 1566 MQQNYPDSVYLLNTQYRMHPMISKFPSAEFYQSKLIDGPGMKEKNTR----PWHLIDPLS 1621
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-----QIGVITPYEGQ 833
P F+ + E S N+ EA+ ++ + + M P+ +IG+I+PY+ Q
Sbjct: 1622 PYRFFDIVSRHEKNELTRSLFNKEEANVCLQLVQKMM--TMVPQSDIAGKIGIISPYKEQ 1679
Query: 834 -RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
R + G L I+ EI+ +VD FQG+EK++IIMSCVR++ + +GFL+D RR
Sbjct: 1680 IRTIKSVFERAYGRL---IFNEIDFNTVDGFQGQEKEIIIMSCVRASANGNVGFLSDVRR 1736
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
+NVALTRA + ++GN L + +W LL
Sbjct: 1737 MNVALTRACTTLWILGNKTSLERDAVWKRLL 1767
>gi|337284021|ref|YP_004623495.1| DNA helicase [Pyrococcus yayanosii CH1]
gi|334899955|gb|AEH24223.1| DNA helicase [Pyrococcus yayanosii CH1]
Length = 656
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 239/497 (48%), Gaps = 84/497 (16%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ AV A+ LI GP GTGKT T A ++ Q VK+ G+ VL A SN+AVD
Sbjct: 172 LNASQKKAVSLALGSSDFFLIHGPFGTGKTRTLAELIRQEVKR-GNKVLATAESNVAVDN 230
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKK------------- 610
L E++ L VVR+ SR + + L Q+ E+ EL++
Sbjct: 231 LVERL--AELNVVRIGHPSR--VSKHLHETTLAYQMTRHELYGELRELLVTAQGLAEKRD 286
Query: 611 -----------------LLQLKE-----------------ETGELSSADEKRY---RMLK 633
+L+L E E +L+ +K + R L+
Sbjct: 287 TYTKPLPKFRRGLSDNEILRLAERGIGARGVPARLIREMAEWIKLNRQVQKAFDEARKLE 346
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ + ++ ADV+ T A L F +IDE+ QAT P ++P I ++ IL
Sbjct: 347 ERIAREIIREADVVLTTNSSAALEILDVADFDVAVIDEATQATIPSILIP-INRVERFIL 405
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYE 752
GDH QL P ++ +A LS++LFE L+ + L +QYRM+ L FPS FYE
Sbjct: 406 AGDHRQLPPTILSLEAQ--ALSKTLFEGLIERYPEKSAMLNIQYRMNERLMAFPSREFYE 463
Query: 753 G------SLQNGVCAD-ERKLSKIDFPWP---VPDKPMLFYVTQGQ----EEIAGSGTSY 798
G S++N AD K PW P+ ++F T + E S
Sbjct: 464 GKIIADESVKNITLADLGVKEPGFSEPWAEILRPENVLVFIDTAHRHDKWERQRRGSESR 523
Query: 799 VNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVA 858
N EA V I + I G+KPE IGVITPY+ QR + + +++EV
Sbjct: 524 ENPLEAKIVATIVGKLIEMGVKPEWIGVITPYDDQRDLI----------SLNVPEDVEVK 573
Query: 859 SVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
+VD +QGREK++II+S VRSN+ IGFL D RRLNV+LTRAK +I++G+ LS P
Sbjct: 574 TVDGYQGREKEVIILSLVRSNERGEIGFLRDLRRLNVSLTRAKRKLIIVGDSATLSSHPT 633
Query: 919 WNNLLNFYKEQKVLVEG 935
+ L+ F KE+ LV+
Sbjct: 634 YKRLVEFVKEKGKLVDA 650
>gi|392591642|gb|EIW80969.1| hypothetical protein CONPUDRAFT_104043 [Coniophora puteana RWD-64-598
SS2]
Length = 1855
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 200/710 (28%), Positives = 316/710 (44%), Gaps = 125/710 (17%)
Query: 332 DGYQYQNIFGPLVKLEA----DYDKRLKESQTQENVTVRW---DVGLNKKSIAYFSLAKT 384
D QY F PL+ LEA K +E + +T R D + SI+
Sbjct: 1034 DHRQYLKTFEPLLLLEAWAQIVQSKEEREESYECKITSRHFIDDFVDMEASISEM----V 1089
Query: 385 DGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFS 444
D RL + D + LR+ ++K V +FG +V L G+ + G
Sbjct: 1090 QKDWRLTEMDVILLRHP--SNKKCILAKAVSYRRTHFGSQVTLRCYIPNGS---SDPGLQ 1144
Query: 445 VDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF---RCHLPKHFSAPN 501
+ +W+ + R++A ++ A Y+ L ++ V+ R + + A N
Sbjct: 1145 IHSVWQLRKVFSLSTLHREYA----ALMALPYYDLFSTIMNPVIKPIPRMNQDEVKRAMN 1200
Query: 502 LPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSP---------- 550
+N Q A+ ++ +LIQGPPGTGKT T +V + + P
Sbjct: 1201 TYKINEPQAKAILGSLSADGFALIQGPPGTGKTSTICGLVEGFIAKRRGPATSIQIGRSS 1260
Query: 551 ----------VLVCAPSNIAVDQLTEK---------IHRTGLKVVRVCAKSREAI----- 586
VL+CAPSN A+D++ + + T LKVVR+ + +
Sbjct: 1261 TNADKAPVQKVLICAPSNAAIDEVANRLKDGFRGPQVRNTSLKVVRIGTEKAMGLSVKDI 1320
Query: 587 -----------DSP------------------------------VSFLA-LH-NQIRNME 603
DSP V LA +H N R M
Sbjct: 1321 ALDYLVDQKINDSPGTKNTSKESGNEINVLRAEIESVKNAKQVKVEELATVHDNTARTMA 1380
Query: 604 MNSELKKL----LQLKEETGEL---SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGD 656
+ E+KKL L L ++ L +D + +++ +L ADVIC T GAG
Sbjct: 1381 LEEEIKKLNSRRLTLTQQIDRLRDKQKSDSRTLDAIRRRFRAEILQEADVICSTLSGAGH 1440
Query: 657 PRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQ 716
+ +++F ++IDE+ QA E ++P+ + ILVGD QL P V+ + A + +Q
Sbjct: 1441 ETIEQLEFEMVIIDEAAQAIELSSLIPLKFPCARCILVGDPQQLPPTVLSQDACKYLYNQ 1500
Query: 717 SLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
SLF RL RP L +QYRMHP++S+ PS FY+G LQ+G E K ++
Sbjct: 1501 SLFVRL--QKHRPDAVHLLSIQYRMHPDISRLPSRIFYQGRLQDGPGMAE-KTRQVWHDN 1557
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK----PEQIGVITP 829
P+ F V++GQE +G S N E+ + +R +R K ++GV++
Sbjct: 1558 PLLGTYRFFNVSKGQES-ESNGRSLKNVLESQVAVALFSR-LRTEYKGIDFDFRVGVVSM 1615
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH-QGIGFLN 888
Y GQ L ++ A I +++ +VD FQG+EKD+II+SCVR+ Q +GFL+
Sbjct: 1616 YRGQ--VLELQRAFEQRFGADIKGKVQFHTVDGFQGQEKDIIILSCVRAGPGLQSVGFLS 1673
Query: 889 DPRRLNVALTRAKYGIIVIGNPKVLSKQPL-WNNLLNFYKEQKVLVE-GP 936
D RR+NV++TRAK + ++GN L + W ++ + + VL + GP
Sbjct: 1674 DVRRMNVSITRAKSSLFILGNAATLERSDSNWRQIIQDARTRNVLTDVGP 1723
>gi|118389184|ref|XP_001027684.1| hypothetical protein TTHERM_00571780 [Tetrahymena thermophila]
gi|89309454|gb|EAS07442.1| hypothetical protein TTHERM_00571780 [Tetrahymena thermophila SB210]
Length = 1567
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/470 (31%), Positives = 236/470 (50%), Gaps = 47/470 (10%)
Query: 448 IWK------STSFDRMQLALRKFAVDDQSVSAYIYHRLLG------HNVDEVLFRCHLPK 495
IWK T++DR AL KF V +SVS I + +L + E+ +
Sbjct: 1044 IWKITKLVNKTTYDRTCEALLKF-VSTKSVSEPIMNIILTPPLCDKQKIQEMSEKIVFTP 1102
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCA 555
+ P LN SQ A++ A R L+LIQGPPGTGKT T+ IV + +Q+ PVL CA
Sbjct: 1103 SKNTLFNPTLNHSQQTALQFATTRALTLIQGPPGTGKTTTAVHIVQEWCRQSSDPVLACA 1162
Query: 556 PSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLK 615
SNIAVD L ++ ++G++ R+ S + + +++ + + ++ + +
Sbjct: 1163 DSNIAVDILHKEFIKSGIRACRIGPGSE----------SKNELMQDPKYRTYIESFKKQQ 1212
Query: 616 EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQA 675
+ +S+ ++ +KK L+ + V+C T VG+ L + F ++IDE+ QA
Sbjct: 1213 QGKNPISA----KFMFMKK-----LISESQVVCATNVGSMSEYLKEQNFTRVIIDEATQA 1263
Query: 676 TEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQ 735
TE ++P+I A+Q++L+GDH QL P V+ A G++ SLFERLV GI+P L Q
Sbjct: 1264 TEMSTIIPLINKAQQVVLIGDHKQLPPTVLSSLAQSKGMTISLFERLVKQGIQPKMLMRQ 1323
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSG 795
YRMH ++ FPS+ FY L+NGV +D+++L F WP + F G+E + S
Sbjct: 1324 YRMHSTIALFPSHQFYNNLLENGV-SDQQRLPIEGFIWPNKLLRVAFININGEERVCQS- 1381
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKP-EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
S +N E V +I ++ +QIGVITPY+ Q+ + + Q
Sbjct: 1382 -SVLNYQEVQVVTEIIVDVLKTKKTSLQQIGVITPYDAQKRRIKNEISN--------LQR 1432
Query: 855 IEVASVDAFQGREKDLIIMSCVRSND---HQGIGFLNDPRRLNVALTRAK 901
V ++ R I S ++N+ +Q +N R+L L R K
Sbjct: 1433 YLVKTIKMISNRTNTKITQSKSKTNERSINQSQKRVNYSRQLKHTLERLK 1482
>gi|452824849|gb|EME31849.1| tRNA-splicing endonuclease positive effector-related protein
[Galdieria sulphuraria]
Length = 895
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 173/576 (30%), Positives = 252/576 (43%), Gaps = 154/576 (26%)
Query: 505 LNRSQVYAVKHAIQRP--LSLIQGPPGTGKTVTSATIV-------YQLV----------- 544
LN SQ AV + LIQGPPGTGKT T I+ YQL
Sbjct: 292 LNASQYEAVASCVTSSTGFHLIQGPPGTGKTNTLLAILNVLHVYGYQLYYDSLIENWYQR 351
Query: 545 --KQTGS---------------------------------PVLVCAPSNIAVDQLTEKIH 569
QT S V++CAPSN AVD+ K+
Sbjct: 352 NGHQTYSLDTDSVSSSTLLSGLLGSLDQTLGSLSRSIRKPRVMICAPSNAAVDEAMSKLL 411
Query: 570 RTGL----------KVVRVCAKSR-----EAIDSPVSFLALHNQIRNMEMNSE------- 607
+ +++R+ A R +A+ + L +NQ + N E
Sbjct: 412 QHSFVDVDGNQYQPEMIRMGANERVSEATKALTAERQALVFYNQFCSNSCNHEQYCVDED 471
Query: 608 LKK--LLQLKEETG------ELSSADEK------RYRMLKKNAEK--------------- 638
LKK L+Q EE E S+ EK R L+++ +
Sbjct: 472 LKKKWLVQWNEEYRNCRMRFEKCSSKEKKMENYERLEQLQRDLNRLTLVFSKERSKDQII 531
Query: 639 -----SLLDNADVICCTCVGA-------GDPRLLKIK--------FHSILIDESMQATEP 678
S + A ++ CT GA G+ + + F +++IDE+ QATEP
Sbjct: 532 SELTLSYVKTAQIVFCTLSGAFLLFSLSGNSAISHTRNQMDKYFWFDTVIIDEAAQATEP 591
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRM 738
C++P + K+ +L+GD QL V QSL ER +G L+ QYRM
Sbjct: 592 ACLIPFLFQIKRCVLIGDPQQLPATVFSCGDLGTAYGQSLLERFCRVGRPVIMLDTQYRM 651
Query: 739 HPELSKFPSNFFYEGSLQN--GVCADERK-LSKIDFPWPVPDKPMLFYVTQGQEEIAGSG 795
HP +S FP+ +FY+G L+N VC D R + DF P+ + ++ G+E + S
Sbjct: 652 HPAISLFPNQYFYQGLLKNDTSVCNDNRSHICHSDFLKPLLGPYAVIDISDGKEFRSSSS 711
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPE----------QIGVITPYEGQ-----RAFLVQH 840
S+ N EA + +I F + E ++G++TPY Q +AF H
Sbjct: 712 GSFYNEKEADIIARIYKYFQHKYLPKETNETNTPFKKRVGIVTPYRRQLLSLRQAFEKHH 771
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA 900
+ +G +E+ SVDAFQGREKD II+SCVR + +GIGF+ D RR+NVA+TRA
Sbjct: 772 ISLRG---------VEIDSVDAFQGREKDWIILSCVRCSFEKGIGFVRDIRRMNVAITRA 822
Query: 901 KYGIIVIGNPKVLSKQPL-WNNLLNFYKEQKVLVEG 935
KY ++++GN K LS W L+ K++ VL+ G
Sbjct: 823 KYSLLIVGNMKALSHHSTDWFALVENAKQRGVLLNG 858
>gi|239049136|ref|NP_001155054.1| immunoglobulin mu binding protein 2 [Nasonia vitripennis]
Length = 905
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 162/463 (34%), Positives = 248/463 (53%), Gaps = 50/463 (10%)
Query: 503 PDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P+L + Q AV+ A++R ++IQGPPGTGKT T I+ QL K G VL+CAP+N+AV
Sbjct: 197 PNLAKDQKSAVEFALKRRYFAIIQGPPGTGKTTTLIEIIVQLQK-FGKKVLICAPTNVAV 255
Query: 562 DQLTEKIHRTGLKVVRVCAKSREA-------IDSPVS----FLALHN---QIRNMEMNSE 607
D L ++ +T K +R+ +R A +DS + F+ L + I+++E N
Sbjct: 256 DNLVIRLGQTEAKPLRLGHPTRIAKEALKYSLDSYLERDDGFIILKDIKKSIKDLETNIG 315
Query: 608 LKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCT--CVGAGDPRLLKI--- 662
+E EL E R R+++ + L VI CT A D +L I
Sbjct: 316 NSGTKYAYKEVRELKK--EYRKRLIRLTCD--TLKKCSVILCTLNSASANDGQLQYIPRD 371
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
F +++DE+ QA E + I A +LIL GD QL PVVMC++A + GL+ SL ER
Sbjct: 372 HFDVLIVDEASQAMEASTWI-AIPNAPKLILAGDINQLPPVVMCQEATKGGLNISLMERA 430
Query: 723 VV-LGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE-------RKLSKIDFPW 773
+ L + RL QYRM+ ++ + S FY+ +L+ AD+ + L +
Sbjct: 431 IKKLNTDCYVRLMRQYRMNEKIMTWSSKKFYDDTLE----ADDLVKNHLLKHLPSVKQED 486
Query: 774 PVPDKPMLFYVTQGQE-EIAGSG---TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITP 829
+ + +++ T G E E +G S N EA V+K+ T ++ G+ + IG ITP
Sbjct: 487 DLTSEAVVYIDTCGCECEEFNTGVEKASKGNLGEAVIVDKVVTNLVKVGLYHKDIGAITP 546
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y Q F+ + S AK +EV++VD FQGREK++II+S VRSN+ + +GF+ D
Sbjct: 547 YALQVDFI------RRSFAAKSLN-VEVSTVDGFQGREKEVIILSLVRSNEDKELGFVTD 599
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
RRLNVA+TRA+ +IVI + + + K L +LL ++ +L
Sbjct: 600 FRRLNVAVTRARRSLIVIADSETMEKDDLIVSLLKHIEDNGLL 642
>gi|190345144|gb|EDK36972.2| hypothetical protein PGUG_01070 [Meyerozyma guilliermondii ATCC
6260]
Length = 701
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 257/552 (46%), Gaps = 103/552 (18%)
Query: 448 IW-----KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL---PKHFSA 499
IW S ++ RM AL K + + + I+ LLG H+ PK +
Sbjct: 144 IWIVKLTNSITYKRMNSALGKLSELNDAKKNVIHRVLLGE------IEPHISPTPKTQTV 197
Query: 500 PNLPDLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
LN SQ A+ A+ P+++I GPPGTGKT T ++ QL G VLVC PSN
Sbjct: 198 FFDSQLNTSQQNAISFALNSSPITIIHGPPGTGKTYTLIELIKQLTFNRGERVLVCGPSN 257
Query: 559 IAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
I+VD + E++ + + K R+ +P + + + R +N+ L+ L + +T
Sbjct: 258 ISVDTILERLSPAFTEELDTKKKKRKIKGNPEKLIRIGHPAR--LLNANLQHSLDVMSKT 315
Query: 619 GELSSADEK---------------------RY-----------------RMLKKNAEKSL 640
S+ D K RY R+ +K + L
Sbjct: 316 NYGSTNDSKSILQDIETDISDTLKQIKKTKRYGERRALYSELKQLKKELRIREKKVVQDL 375
Query: 641 LDNADVICCTCVGAGDPRLLKIK-----------FHSILIDESMQATEPECMVPVI--LG 687
+ A V+ T G+G L I F +I+IDE Q+ EP+C +P++ LG
Sbjct: 376 VVGAQVVLSTLHGSGSYELTSIYKDQAFGPEKPLFDTIIIDEVSQSMEPQCWIPLVNHLG 435
Query: 688 AKQLILVGDHCQLGPVVMCKKAA----------------RAGLSQSLFERLVVLGIRPFR 731
K+L++ GD+ QL P V ++ + L +LF+RL+ LG ++
Sbjct: 436 FKRLVIAGDNMQLPPTVKSEEKKKREKKEVGDRLKDLRLKYSLEHTLFDRLIGLGGAKYK 495
Query: 732 --LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP--MLFYVTQG 787
L+ QYRM+ ++ FPS Y G L + L+ + D ++Y TQG
Sbjct: 496 QLLDTQYRMNTQIMTFPSRELYGGKLLAHESVADISLADMTDVMHNDDTTEVCIWYDTQG 555
Query: 788 Q-----EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
Q + +G+ Y N EA V + T R I G+ E IG+ITPY Q + + +Q
Sbjct: 556 QGFNDQTDDDTTGSKY-NEHEAELVVQHTHRLIDAGVTAESIGIITPYSSQVGIIKKILQ 614
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
PA +EV++VD FQGREK+ I++S VRSND IGFL D RRLNVA+TR K
Sbjct: 615 N----PA-----VEVSTVDGFQGREKEAILISLVRSNDEGEIGFLRDKRRLNVAMTRPKR 665
Query: 903 GIIVIGNPKVLS 914
+ VIG+ ++++
Sbjct: 666 HLCVIGDMELMA 677
>gi|146423531|ref|XP_001487693.1| hypothetical protein PGUG_01070 [Meyerozyma guilliermondii ATCC
6260]
Length = 701
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 169/552 (30%), Positives = 257/552 (46%), Gaps = 103/552 (18%)
Query: 448 IW-----KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL---PKHFSA 499
IW S ++ RM AL K + + + I+ LLG H+ PK +
Sbjct: 144 IWIVKLTNSITYKRMNSALGKLSELNDAKKNVIHRVLLGE------IEPHISPTPKTQTV 197
Query: 500 PNLPDLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
LN SQ A+ A+ P+++I GPPGTGKT T ++ QL G VLVC PSN
Sbjct: 198 FFDSQLNTSQQNAISFALNSSPITIIHGPPGTGKTYTLIELIKQLTFNRGERVLVCGPSN 257
Query: 559 IAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEET 618
I+VD + E++ + + K R+ +P + + + R +N+ L+ L + +T
Sbjct: 258 ISVDTILERLSPAFTEELDTKKKKRKIKGNPEKLIRIGHPAR--LLNANLQHSLDVMSKT 315
Query: 619 GELSSADEK---------------------RY-----------------RMLKKNAEKSL 640
S+ D K RY R+ +K + L
Sbjct: 316 NYGSTNDSKSILQDIETDISDTLKQIKKTKRYGERRALYSELKQLKKELRIREKKVVQDL 375
Query: 641 LDNADVICCTCVGAGDPRLLKIK-----------FHSILIDESMQATEPECMVPVI--LG 687
+ A V+ T G+G L I F +I+IDE Q+ EP+C +P++ LG
Sbjct: 376 VVGAQVVLSTLHGSGSYELTSIYKDQAFGPEKPLFDTIIIDEVSQSMEPQCWIPLVNHLG 435
Query: 688 AKQLILVGDHCQLGPVVMCKKAA----------------RAGLSQSLFERLVVLGIRPFR 731
K+L++ GD+ QL P V ++ + L +LF+RL+ LG ++
Sbjct: 436 FKRLVIAGDNMQLPPTVKSEEKKKREKKEVGDRLKDLRLKYSLEHTLFDRLIGLGGAKYK 495
Query: 732 --LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP--MLFYVTQG 787
L+ QYRM+ ++ FPS Y G L + L+ + D ++Y TQG
Sbjct: 496 QLLDTQYRMNTQIMTFPSRELYGGKLLAHESVADISLADMTDVMHNDDTTEVCIWYDTQG 555
Query: 788 Q-----EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
Q + +G+ Y N EA V + T R I G+ E IG+ITPY Q + + +Q
Sbjct: 556 QGFNDQTDDDTTGSKY-NEHEAELVVQHTHRLIDAGVTAESIGIITPYSSQVGIIKKILQ 614
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
PA +EV++VD FQGREK+ I++S VRSND IGFL D RRLNVA+TR K
Sbjct: 615 N----PA-----VEVSTVDGFQGREKEAILISLVRSNDEGEIGFLRDKRRLNVAMTRPKR 665
Query: 903 GIIVIGNPKVLS 914
+ VIG+ ++++
Sbjct: 666 HLCVIGDMELMA 677
>gi|340384719|ref|XP_003390858.1| PREDICTED: peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein-like [Amphimedon queenslandica]
Length = 1478
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 164/510 (32%), Positives = 235/510 (46%), Gaps = 87/510 (17%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV-----------KQTGSPVL 552
+LN Q ++K A+ LIQGPPGTGK+ T A + Y + VL
Sbjct: 964 ELNPIQQDSIKRALTNSFQLIQGPPGTGKSETGAHLAYIFSLTNKEIFEEDPTSSFKSVL 1023
Query: 553 VCAPSNIAVD-------QLTEKIHRTGLKVVRVCAKSREAID--SPVSFL---------- 593
C PSN +VD L EK+ LK++R+ ++ E ID PV L
Sbjct: 1024 YCGPSNKSVDVVHKNLHLLNEKLGSKRLKILRIYGRTHERIDYSDPVFDLTQKRAEKDDN 1083
Query: 594 ------------ALHNQIRNM--EMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
+LH IR E+ + KL +L ++ SS + K Y+ + ++EKS
Sbjct: 1084 DGGLVLEEFRNESLHKIIRQNFPEIRTTETKLQKLLSQSIIPSSTERKNYKDMITSSEKS 1143
Query: 640 -LLDNADVICCTCVGAGDPRLLKIK--FHSILIDESMQATEPECMVPVILGAKQLILVGD 696
+ +N DVI CTC RLL K +IDES ATEPE + L + ++L+GD
Sbjct: 1144 EIQNNYDVILCTCNETCSRRLLNSKDILAQCIIDESGMATEPETIAASSL-CEHVVLIGD 1202
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIR--------PFRLEVQYRMHPELSKFPSN 748
H QL PV+ A GL SLFER R LE+QYRMH + + PS
Sbjct: 1203 HKQLQPVIKYPPAKECGLGTSLFERYANQFERYAESEDSYLITLELQYRMHSFICQGPSG 1262
Query: 749 FFYEGSLQNGVCADERK--LSKIDFPWPVPDK-PMLFYVTQGQEEIAGS-------GTSY 798
FY L+ ER+ ID WP + P+LF G E+ S S
Sbjct: 1263 IFYNSKLKADQIVKERRPLTQSIDLFWPRGQQYPVLFLKVYGVEKFTDSKHSKEIDSHSK 1322
Query: 799 VNRTEASNVEKITTRFI-RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY-QEIE 856
N EA V K + + +K E I V+TPY Q+ + ++ L K Y + +
Sbjct: 1323 CNEQEAKAVLKCIKKLVMNHNVKHESIAVLTPYGAQKNLITDMIK--DDLELKPYWKSLR 1380
Query: 857 VASVDAFQGREKDLIIMSCVRSND-----------------HQGIGFLNDPRRLNVALTR 899
VA++ QG E D++I++ VRS + +GFL D ++NV +TR
Sbjct: 1381 VATIVESQGDEYDIVILTTVRSQKVSEIRYKEYIQPDRRWLTENLGFLTDDHQINVGITR 1440
Query: 900 AKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
A+YG+I+IGN K+L WN L+ FY+++
Sbjct: 1441 ARYGLILIGNDKLLRYDKTWNRLIKFYEDE 1470
>gi|198422283|ref|XP_002119912.1| PREDICTED: similar to capping protein (actin filament) muscle
Z-line, alpha 1 [Ciona intestinalis]
Length = 968
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 266/554 (48%), Gaps = 89/554 (16%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAV----D 467
G VI++ N EV L L S G F+V F +F+R+ + L+ AV +
Sbjct: 409 GRVIEVRLN---EVVLLLNESFGRSYMKGMRFNVSF-----TFNRLPMKLQHRAVNGITE 460
Query: 468 DQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL--NRSQVYAVKHAI---QRPLS 522
DQ + RL H D+V+ K ++ D+ N+ Q AVKH + R
Sbjct: 461 DQREIVFPQTRLNEHMPDQVV------KMYNR----DIEGNQQQAEAVKHIVFGKSRIPY 510
Query: 523 LIQGPPGTGKTVTSATIVYQLVK-QTGSPVLVCAPSNIAVDQLTEKI--HRTGLKVVRVC 579
+I GPPGTGKTVT + Q+ K LVCAPSN A D + E++ H ++ R+C
Sbjct: 511 IIYGPPGTGKTVTMVEAIKQVHKFHPDYKCLVCAPSNSACDLMAERLIGHIDKKRMFRMC 570
Query: 580 AKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKS 639
A SR+ D P ++K + TG+ Y L+
Sbjct: 571 AMSRQWRDVP----------------EKVKPISNYNSSTGDYY------YPPLET----- 603
Query: 640 LLDNADVICCTCVGAGDPRLLKI---KFHSILIDESMQATEPECMVPV--ILGAK-QLIL 693
L VI T + AG + F+ + IDE+ A EPECMV V IL + +++L
Sbjct: 604 -LKEYTVILTTLITAGRISWAEFPNNHFNYVFIDEAGHAVEPECMVAVEGILAKRGRVVL 662
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLV--VLGIRP----------FRLEVQYRMHPE 741
GD QLGP++ KA + GL QS ERL+ V P +L YR HP+
Sbjct: 663 AGDPKQLGPIIRSTKAKKFGLDQSYLERLMTTVDLYEPNGTEYDTWVITKLLNNYRSHPD 722
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
+ K P+ FYE L+ R+ P P++F+ QG+++ + SY N
Sbjct: 723 IIKVPNECFYENELEPHADIYMRESFCTWEHLPKSGFPIIFHGIQGEDKREENSPSYFNP 782
Query: 802 TEASNVEKITTRFI---RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVA 858
EA V + + R + P +IG+I+PY Q L + Q + + A +EI++
Sbjct: 783 QEAFIVYDYVVKLLETRRNRVLPSEIGIISPYRKQVQKLRKIFQDKKTRGA---EEIKIG 839
Query: 859 SVDAFQGREKDLIIMSCVRSN------DHQ-GIGFLNDPRRLNVALTRAKYGIIVIGNPK 911
SV+ FQG+E+ +II+S VRS+ D + +GFL +P+R NVA+TRAK +IV+GNP
Sbjct: 840 SVEEFQGQERKVIIVSTVRSDCQYLTEDRKFHLGFLQNPKRFNVAVTRAKALLIVVGNPH 899
Query: 912 VLSKQPLWNNLLNF 925
+LS WN+LL F
Sbjct: 900 ILSMDFYWNSLLTF 913
>gi|152990986|ref|YP_001356708.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
gi|151422847|dbj|BAF70351.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
Length = 726
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 238/504 (47%), Gaps = 80/504 (15%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
PK S + LN SQ AV+ A+ + LI GPPGTGKT T ++ Q VK+ G+ VL
Sbjct: 229 PKKQSFEVVTKLNESQNEAVQKALGSEVFLIHGPPGTGKTSTLIELILQEVKR-GNKVLA 287
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVR------------------------------------ 577
A SN AVD + +++ + +VR
Sbjct: 288 TADSNTAVDNMLQRLASHDISLVRIGHPARILYELEEFSIHAKYEKSLEAEAIKKGWEEI 347
Query: 578 -VCAKSREAIDSPVSFLAL---HNQIRNMEMNSE------------LKKLLQLKEETGEL 621
V K RE P A H++I + + + K ++L + L
Sbjct: 348 GVLVKEREQHSKPTQARARGMSHDRIMTLAARGKSMRGVSVATMQSMAKWIKLDRKIDSL 407
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
K R ++ K++++NADV+ T L F +IDE Q P +
Sbjct: 408 I----KNLRFEEERVYKNIIENADVVLSTNGMIMSDMLKNFHFDVAVIDEGSQQIIPSTL 463
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIR-PFRLEVQYRMHP 740
+P I+ A + I+ GDH QL P V+ L +SLFE+L++ + L +QYRMH
Sbjct: 464 IP-IMHANRFIIAGDHKQLPPTVVSDSKE---LKESLFEKLIIQYPKNASMLRIQYRMHE 519
Query: 741 ELSKFPSNFFYEGSL-------QNGVCADERKLSKIDFPWPVPDKPMLFYVTQG---QEE 790
++ +F + FYEG L + +C E K K F + +P++F T+G +E
Sbjct: 520 KIMQFSNEQFYEGKLIADASVKHHTICDFELKEPK-RFEAILGCEPLVFVDTKGVEAKEM 578
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
+A TSY N EA V ++ + G+K E IG+I+PY Q V+ ++ +
Sbjct: 579 LAQRSTSYENEKEAKIVSALSEELLSMGLKTEDIGIISPYAAQ----VKRIKKLVETDER 634
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
I IEV +VD FQGREK++II+S VRSN++ IGFL D RRLNVA+TRAK +I IG+
Sbjct: 635 I---IEVKTVDGFQGREKEVIIISFVRSNENGKIGFLKDLRRLNVAITRAKRKLICIGDA 691
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVE 934
L + L + K++ +E
Sbjct: 692 STLIHDETYKAFLEYVKKEGKYIE 715
>gi|149241697|ref|XP_001526342.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450465|gb|EDK44721.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2053
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 157/509 (30%), Positives = 242/509 (47%), Gaps = 99/509 (19%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQ--------------- 546
D+N+SQ A+K + LIQGPPGTGKT T IV Y L +
Sbjct: 1349 DVNKSQARAIKGTYESDGFFLIQGPPGTGKTKTILGIVGYALSHKESDKIIELPQKPAAK 1408
Query: 547 --TGSPVLVCAPSNIAVDQLTEKIHRTG----------LKVVRVC--------------- 579
G +L+CAPSN AVD+L ++ R G LKVVR+
Sbjct: 1409 PSKGGKILICAPSNAAVDELVLRL-RNGVKNSKGEHMDLKVVRLGRSDAINAAVRDLTLE 1467
Query: 580 ----------------------------AKSREAIDSPVSFLALHN------QIRNMEMN 605
K R+ I + +S +L + + R E+N
Sbjct: 1468 ELVDKELQSKQQEDVIIDPGIRAEHTKKVKERDQIKTRLSTESLSSKEIDKLETRLREVN 1527
Query: 606 SELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL--LKIK 663
E L + +E E +S + + ++ + +LD+A V+C T G+ + L +K
Sbjct: 1528 KERSDLAKKLDEQRERASIAYRSREIGRRTIQTKILDDAQVLCATLSGSAHELISSLSVK 1587
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ Q E ++P+ G ++ I+VGD QL P V+ + A+ QSLF R+
Sbjct: 1588 FDQVIIDEACQCLELSAIIPLRYGCRKCIMVGDPNQLPPTVLSQAASSFNYEQSLFVRMQ 1647
Query: 724 V-LGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV--PDKPM 780
+ L VQYRMHP++S+FPS FY+ L++G +E+ PW P P
Sbjct: 1648 TNYPDSVYLLNVQYRMHPQISQFPSAEFYQSKLKDGPNMEEKN----KRPWHSIKPLSPY 1703
Query: 781 LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ-----IGVITPYEGQ-R 834
F+ + S N EA ++ + I + P+Q +G+I+PY+ Q R
Sbjct: 1704 RFFDIASRHTKNELTRSLFNLEEARICLQLVQKLI--TLIPQQAFAGKVGIISPYKEQIR 1761
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
++ G + I EI+ +VD FQG+EK++IIMSCVR++ +GFL+D RR+N
Sbjct: 1762 TIKDVFVREYGKI---ILNEIDFNTVDGFQGQEKEIIIMSCVRASADGNVGFLSDVRRMN 1818
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
VALTRA+ + ++GN + L + +WN LL
Sbjct: 1819 VALTRARTTLWILGNRESLLRNKVWNRLL 1847
>gi|406603293|emb|CCH45172.1| DNA-binding protein SMUBP-2 [Wickerhamomyces ciferrii]
Length = 681
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/461 (32%), Positives = 240/461 (52%), Gaps = 68/461 (14%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN+SQ A+ ++ P+S+I GPPGTGKT T ++ QLV + G VLVC PSNI+VD +
Sbjct: 212 LNQSQKNAINFSLNSPISIIHGPPGTGKTYTLIELILQLVSK-GERVLVCGPSNISVDTI 270
Query: 565 TEKIHRT--GLKVVRVCAKSR----------EAIDSPVSFLALHNQIRNMEMNSELKKLL 612
E+++ G +++R+ +R + + + L I+ E++ +KK+
Sbjct: 271 LERLNGKLPGDELLRIGHPARLLNSNLQHCLDIVTNTSDSGQLIADIKK-EIDDTIKKIK 329
Query: 613 QLK---------EETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ + +E EL +KR +K ++ A VI T G+ LL I
Sbjct: 330 KTRSYKEKKSIWQEVKELRKELKKR----EKTVTHEVILKAKVIMATLHGSSSRDLLSIY 385
Query: 664 --------FHSILIDESMQATEPECMVPVI----LGAKQLILVGDHCQLGPVVMCKK--A 709
F +I+IDE Q+ EP+C +P+I K+L+L GD+ QL P + +
Sbjct: 386 NHQPGLKLFDTIIIDEVSQSLEPQCWIPLINHYGSNVKKLVLAGDNKQLSPTIKIDNNPS 445
Query: 710 ARAGLSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
LS ++F+RLV + F+ L +QYRM+ + KF S Y G L+ ADE +S
Sbjct: 446 VERILSTTIFDRLVSIYGDSFKNLLNIQYRMNESIMKFSSKVLYGGELK----ADE-SVS 500
Query: 768 KI---DFPWPVPDK----PMLFYVTQGQEEIAGSGT------SYVNRTEASNVEKITTRF 814
I DFP + P+++Y TQG S S N EA V+
Sbjct: 501 NILLTDFPEVEKNDYTEFPIIWYDTQGDFPEKDSSDHNDLIPSKFNDMEAYVVKFHLKHL 560
Query: 815 IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS 874
++ G+K E IG+I+PY Q +FL + + + +E+++VD FQGREK++II++
Sbjct: 561 LKSGVKEEHIGIISPYNAQVSFLKKLIHND-------WPRVEISTVDGFQGREKEVIILT 613
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
VRSN ++ +GFL D +RLNVA+TR K + ++G+ + +++
Sbjct: 614 LVRSNLNKDVGFLKDEKRLNVAITRPKRQLCIVGDMETINQ 654
>gi|145342493|ref|XP_001416216.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576441|gb|ABO94509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 795
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 267/573 (46%), Gaps = 141/573 (24%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQR----------PLSLIQGPPGTGKT---VTSATIVYQL 543
F AP LN Q+ A+ +QR P SLIQGPPGTGKT ++ A +V+ L
Sbjct: 240 FVAPMQATLNTPQLDALLACVQRIHNSKKSDQPPFSLIQGPPGTGKTKVILSLANVVHLL 299
Query: 544 -----------------VKQTGS-------------------PVLVCAPSNIAVDQLTEK 567
V Q S +L+CAPSN AVD + E+
Sbjct: 300 QFHDYFEKVMSLVKAGKVAQADSLKRKRQTEQDNANTHNFKPRILICAPSNAAVDNILER 359
Query: 568 IHRTGLK----------VVRVCAKSREAIDSPVSFLALHNQIRN-MEMN----------- 605
I R ++R+ + + + +++ ++RN MEM+
Sbjct: 360 IIRERFAQLDNSRYSPDILRLVSGDAN-VSTTAQSVSVEQRVRNLMEMSTLDWSSWYSRQ 418
Query: 606 ------SELK-----------------KLLQLKE----ETGELSSADEKR---------- 628
SELK ++QL E G+L+ + R
Sbjct: 419 YHTVTVSELKIKEHLRDDIQVLNSSESSIIQLYEVRDRALGDLARLERLRPLHHCTSTTQ 478
Query: 629 ----YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVP 683
+R + ++ S +D A+++CCT L + F +I+IDE+ QA E ++P
Sbjct: 479 NMCSFRQISEHISASFVDEAEIVCCTLTSIKRHVLASSRPFKTIIIDEACQANELSTLIP 538
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+ L +LVGD QL V A +A +SLFERL+V G+R L VQYRMHP++
Sbjct: 539 MTLSNAHCVLVGDPKQLPATVKSLNAKQAKFDRSLFERLMVAGMRCNLLTVQYRMHPQIR 598
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKI-DFP----WPVPDKP-MLFYVTQGQEEIAGSGTS 797
FPS+ FY +L D L+KI D P WP +P M+F GQE A S +
Sbjct: 599 MFPSSIFYSNAL-----IDAPGLAKIRDLPSHRCWPF--QPYMVFDAVDGQEIQAASFSR 651
Query: 798 YVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
Y N+ EAS + EK F +++ V++ Y Q L+Q+M +Q + Q
Sbjct: 652 Y-NQVEASFIIDLLEKYYQLFPLVDDSTQKVVVLSGYRKQ-CELIQNMLHQK---PTLGQ 706
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
I V+++DAFQG+E DL+I+SCVR++ + IGF++D RRLNVALTRAK + ++ + +
Sbjct: 707 LISVSTIDAFQGQEGDLVILSCVRTSAN-DIGFVSDMRRLNVALTRAKSSLWIVCKCEAV 765
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
SK W LL KE+ + NL+++L L
Sbjct: 766 SKFNFWKALLKNAKERGCYTD----NLQDALAL 794
>gi|119497825|ref|XP_001265670.1| DNA helicase, putative [Neosartorya fischeri NRRL 181]
gi|119413834|gb|EAW23773.1| DNA helicase, putative [Neosartorya fischeri NRRL 181]
Length = 713
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 242/502 (48%), Gaps = 75/502 (14%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCHLPKHFSAPNLPDLNRSQVY 511
+F RM + K A S ++ GH + + P F P L N SQ
Sbjct: 196 TFRRMNQTMEKMAKMTDSDYSHFMRVAFGHTAPMQPDYDAIGPVEFVDPTL---NDSQKE 252
Query: 512 AVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
A++ A+ R ++LI GPPGTGKT T ++ Q+VK+ VLVC PSN++VD + E++
Sbjct: 253 AIRFALASRDVALIHGPPGTGKTHTLIELILQMVKRKLR-VLVCGPSNVSVDNIVERLAP 311
Query: 571 TGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSELKKLLQLKEETGELSS 623
G+ VVR+ +R ++ + L ++ ++++ + K+ K TG
Sbjct: 312 NGVPVVRIGHPARLLPSVLEHSLEVLTHTSEAAAIVKDVRKEIDEKQASIRKTRTGRERR 371
Query: 624 A---DEKRYRMLKKNAEKSLLDN----ADVICCTCVGAGDPRLLKIKFHSILIDESMQAT 676
A D K R + E +DN ++V+ T GAG +L KF ++IDE+ QA
Sbjct: 372 AIYDDLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDVVVIDEASQAL 431
Query: 677 EPECMVPVILGAKQLILVGDHCQLGPVVMCK---------------KAARAG-------- 713
E +C +P +L A +++L GDH QL P V K A A
Sbjct: 432 EAQCWIP-LLPASKVVLAGDHLQLPPTVKSSVEKSKNAKKKGKSDTKDASASSAEIIGDF 490
Query: 714 -LSQSLFERLVVL---GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKI 769
L +LF+RL+ L GI+ L QYRMH ++ +FPSN YE L R L
Sbjct: 491 SLETTLFDRLLSLHGPGIKRM-LTTQYRMHEKIMQFPSNELYESKLIAAEAVKSRLLK-- 547
Query: 770 DFPWPVPD-----KPMLFYVTQG-------QEEIAGS-----GTSYVNRTEASNVEKITT 812
D P+ V + +P++F+ TQG +++ G G S N EA V K
Sbjct: 548 DLPYQVEETDDTREPVVFWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALVVAKHVQ 607
Query: 813 RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLII 872
I+ G+KPE I ITPY GQ A L ++ + Y +E+ SVD FQGREK+ ++
Sbjct: 608 NLIQAGVKPEDIACITPYNGQLALLSSMLREK-------YPGLELGSVDGFQGREKEAVV 660
Query: 873 MSCVRSNDHQGIGFLNDPRRLN 894
+S VRSN +GFL + RRLN
Sbjct: 661 VSLVRSNSEHEVGFLGEKRRLN 682
>gi|342890168|gb|EGU89032.1| hypothetical protein FOXB_00444 [Fusarium oxysporum Fo5176]
Length = 1016
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 234/473 (49%), Gaps = 81/473 (17%)
Query: 503 PDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN SQ A++ A+ R ++LI GPPGTGKT T ++ Q+ K G +LVC PSNI+V
Sbjct: 536 PTLNDSQKNAIRFALLSREVALIHGPPGTGKTHTLIELILQMTK-LGQRILVCGPSNISV 594
Query: 562 DQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFL-------ALHNQIRNMEMNSELKKL 611
D + E++ + ++R+ +R +D + L A+ IR EM+++ +
Sbjct: 595 DNIVERLAPHKIPILRLGHPARLLPSVVDHSLDVLTQTSEAGAIVKDIRT-EMDTKQASI 653
Query: 612 LQLKEETGELSSADEKR--YRMLKKNAE----------KSLLDNADVICCTCVGAGDPRL 659
+ K S E++ Y LK+ + +L+ + V+ T GAG +L
Sbjct: 654 KKTK-------SGKERKAIYTDLKELRKEFRERERRCVSTLIGGSKVLLATLHGAGGYQL 706
Query: 660 LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG------ 713
+F ++IDE+ QA E +C VP++ AK+++ GDH QL P + A
Sbjct: 707 RNDEFDVVIIDEASQALEAQCWVPLV-SAKKVVCAGDHLQLPPTIKSSNAKVKAPVKDGA 765
Query: 714 -------LSQSLFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADER 764
L +LF+RL+ L + L QYRMH + +FPS+ Y+ L R
Sbjct: 766 AVTKGTTLEITLFDRLLALHGPSIKRMLTTQYRMHESIMRFPSDELYDSKLIAADAVKHR 825
Query: 765 KLSKIDFPWPVPD-----KPMLFYVTQG---------------QEEIAG-SGTSYVNRTE 803
L D + V D +P++F TQG ++ AG G S N E
Sbjct: 826 LLK--DLEYEVQDNEDTNEPVIFIDTQGGDFPEKNEEDDKDTPRKGRAGLHGDSKSNEME 883
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK-IYQEIEVASVDA 862
A+ V++ + + G++PE I V+TPY Q A L P K + IE+ SVD
Sbjct: 884 AALVQQHVRQLVGAGVRPEDIAVVTPYNAQLAILA---------PLKDKFPGIELGSVDG 934
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
FQGREK+ +I+S VRSN +GFL + RRLNVA+TR K + VIG+ + + +
Sbjct: 935 FQGREKEAVIVSLVRSNSEGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVQR 987
>gi|402075170|gb|EJT70641.1| DNA-binding protein SMUBP-2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 2075
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 179/317 (56%), Gaps = 20/317 (6%)
Query: 633 KKNAEKSLLDNADVICCTCVGAGDP--RLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
++ ++S+L +A V+C T G+G + L+++F +++IDE+ Q E ++P+ GA +
Sbjct: 1554 RRGIQQSILADAHVLCATLSGSGHDMFKTLQVEFETVIIDEAAQCVELSALIPLKYGASK 1613
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRMHPELSKFPSNF 749
+LVGD QL P V+ + AAR G QSLF R+ + L+ QYRMHPE+S FPS
Sbjct: 1614 CVLVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQNHPTKVHLLDCQYRMHPEISLFPSKE 1673
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPML----FYVTQGQEEIAGSGTSYVNRTEAS 805
FYEG L +G D KL + PW + P+L F+ +G +E G S VN E S
Sbjct: 1674 FYEGRLADG--DDMAKLRQQ--PWH--ENPLLGPYRFFDVEGIQERGNRGQSLVNTNEVS 1727
Query: 806 NVEKITTRFI-----RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
+I RF RCG +IG+ITPY+ Q L Q ++ + ++IE +
Sbjct: 1728 VALQIFNRFSTDFSSRCGDLKGKIGIITPYKAQLHALRQ--RFLDRYGEAVLEQIEFNTT 1785
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGRE ++II SCVR++ GIGF+ D RR+NV LTRA+ + V+G+ + L + P W
Sbjct: 1786 DAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWVLGDSRALKQGPFWA 1845
Query: 921 NLLNFYKEQKVLVEGPL 937
L+ K + G +
Sbjct: 1846 KLIEDAKARDRYTSGSI 1862
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 23/92 (25%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV------------------- 544
LN+ Q A+ +A + +L+QGPPGTGKT T +V L+
Sbjct: 1341 LNKGQASAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGNIKINKPPPVPVRPGVN 1400
Query: 545 --KQTGSPVLVCAPSNIAVDQLTEKIHRTGLK 574
+LVCAPSN AVD+L ++ + G+K
Sbjct: 1401 GEAPMARKLLVCAPSNAAVDELVLRL-KAGIK 1431
>gi|15220521|ref|NP_172037.1| putative RNA helicase SDE3 [Arabidopsis thaliana]
gi|50401594|sp|Q8GYD9.1|SDE3_ARATH RecName: Full=Probable RNA helicase SDE3; AltName: Full=Silencing
defective protein 3
gi|26450472|dbj|BAC42350.1| unknown protein [Arabidopsis thaliana]
gi|332189722|gb|AEE27843.1| putative RNA helicase SDE3 [Arabidopsis thaliana]
Length = 1002
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 180/595 (30%), Positives = 274/595 (46%), Gaps = 102/595 (17%)
Query: 390 LMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIW 449
L+ GD + +R++YD + G V ++ DEV ++ S A + ++V F +
Sbjct: 295 LVHGDFIFVRHAYDDGTDHAYQGFVHRVE---ADEVHMKFASEFHQRHTAGSVYNVRFTY 351
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
+ R+ A+ + D + +++ L R K F P P LN Q
Sbjct: 352 NRINTRRLYQAVDAAEMLDPN---FLFPSLHSGK------RMIKTKPF-VPISPALNAEQ 401
Query: 510 VYAVKHAIQ---RPLSLIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLT 565
+ +++ + P +I GPPGTGKT+T + QL Q + VLVCAPSN A D +
Sbjct: 402 ICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHIL 461
Query: 566 EKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGELSSAD 625
EK+ +C + D+ + +N+ + ++K E D
Sbjct: 462 EKL---------LCLEGVRIKDNEI-----------FRLNAATRSYEEIKPEIIRFCFFD 501
Query: 626 E-----------KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQ 674
E RY+++ + L NA+ + + F IL+DE+ Q
Sbjct: 502 ELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVN------------RGHFTHILLDEAGQ 549
Query: 675 ATEPECMVPV---ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-----VLG 726
A+EPE M+ V L ++L GD QLGPV+ + A GL +S ERL G
Sbjct: 550 ASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEG 609
Query: 727 IRPF--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLF 782
+ +L YR HPE+ PS FY+G L + L+ ++F +P+K PM+F
Sbjct: 610 DENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNF---LPNKEFPMVF 666
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR--CGMKPEQIGVITPYEGQRAFLVQH 840
Y QG +E G+ S+ NR E S V + R C ++ E IGVITPY Q
Sbjct: 667 YGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDC-VQEEDIGVITPYRQQV------ 719
Query: 841 MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-------IGFLNDPRRL 893
M+ + L E++V SV+ FQG+EK +II+S VRS +GFL++PRR
Sbjct: 720 MKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRF 779
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLL------NFYK-----EQKVLVEGPL 937
NVA+TRA +++IGNP ++ K WN LL N Y+ EQ+ VE P
Sbjct: 780 NVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEEPF 834
>gi|170089137|ref|XP_001875791.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649051|gb|EDR13293.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1937
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 156/503 (31%), Positives = 234/503 (46%), Gaps = 100/503 (19%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP------------ 550
++N Q A+ +++ SLIQGPPGTGKT T +V + V + P
Sbjct: 1294 NVNEPQAAAIISSMEAEGFSLIQGPPGTGKTSTICGLVARFVSRRQRPSVPIVIGRNAPP 1353
Query: 551 --------VLVCAPSNIAVDQLTEKIH---------RTGLKVVRVCAKS----------- 582
+L+CAPSN A+D++ ++ + L+VVR+ A
Sbjct: 1354 AEKPSVAKILICAPSNAAIDEIAHRLKGGYSGSIKGQGSLRVVRIGAVQSMNLSVRDISL 1413
Query: 583 ----REAIDSPVSFLA--------LH----------------------NQIRNMEMNSEL 608
+ +D + LA LH N R + SE+
Sbjct: 1414 DSLVEQKLDYSSTPLAEIGNEIKSLHRDIAALKDLRQQKLQDLVAVRDNSARTKTLESEV 1473
Query: 609 KKL--------LQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
+ L QL ++ +L S D + L++ ++ +L+ ADV+C T GAG L
Sbjct: 1474 QNLGSKRQDLVTQLNQKKDKLKS-DTRSLDTLRRGIQRDILNEADVVCSTLSGAGHDTLA 1532
Query: 661 KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
+ F ++IDE+ QA E ++P+ + + +LVGD QL P V+ ++A R +QSLF
Sbjct: 1533 QHDFEMLIIDEAAQAIELSSLIPLKYNSARCVLVGDPQQLPPTVLSQEACRYSYNQSLFV 1592
Query: 721 RLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK- 778
RL L +QYRMHP++S+FPS FYE +Q+G DE PW K
Sbjct: 1593 RLQKRCPNAVHLLSIQYRMHPDISRFPSRVFYESKIQDGPRMDEVTKQ----PWHTHVKF 1648
Query: 779 --PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVITPYEGQ 833
F V+QG EE SG S N E + R + ++GV++ Y Q
Sbjct: 1649 GTYKFFNVSQGVEE--QSGRSIKNLAECQVAVALYNRLCQEYKAFNFDSRVGVVSMYRAQ 1706
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH-QGIGFLNDPRR 892
L +H ++ I I+ +VD FQG+EKD+II+SCVRS Q +GFL+D RR
Sbjct: 1707 IVELRRH--FEKRFGKDIIGRIDFNTVDGFQGQEKDVIILSCVRSGPGLQSVGFLSDVRR 1764
Query: 893 LNVALTRAKYGIIVIGNPKVLSK 915
+NVALTRAK + ++GN L +
Sbjct: 1765 MNVALTRAKSSLFILGNAPTLER 1787
>gi|320580258|gb|EFW94481.1| DEAD-box type RNA helicase [Ogataea parapolymorpha DL-1]
Length = 968
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 149/479 (31%), Positives = 235/479 (49%), Gaps = 40/479 (8%)
Query: 467 DDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL------NRSQVYAVKHAIQRP 520
DDQS + +R + + FR +P + + N SQ A+ + +
Sbjct: 270 DDQSKYTSVKNRFASADEYQQTFRPLVPGKIDPVVVGRMKQTYAVNDSQARAIAGTVHKD 329
Query: 521 -LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVC 579
SLIQGPPGTGKT T I+ G + P+ IA E++ L V
Sbjct: 330 GFSLIQGPPGTGKTKTILGII-------GCALTSGNPNAIAT--TLEELVDAQLSAVDTA 380
Query: 580 AKSREAIDSPVSFLALHNQIR-NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEK 638
A + + + +++R + ++ K+L + +E E +S + + ++NA+
Sbjct: 381 ADDTKIREEHRKCVHERDELRQKLAAGNKRKELGRRLDELREQNSVKHRNREIERRNAQF 440
Query: 639 SLLDNADVICCTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGD 696
+L +A+V+C T G+ L + F +++IDE+ Q E ++P+ GAK+ I+VGD
Sbjct: 441 RILSSAEVVCSTLSGSAHDVLAGMSFTFDTVVIDEAAQCIELSAIIPLRYGAKRCIMVGD 500
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSL 755
QL P V+ +KAA QSLF R+ + L VQYRMHPE+SKFPS FY+ L
Sbjct: 501 PNQLPPTVLSQKAASFNYEQSLFVRMQNNHDNAVYLLNVQYRMHPEISKFPSKEFYDSKL 560
Query: 756 QNGVCADERKLSKIDFPWPVPDK--PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTR 813
+G E K PW + P F+ +G + S N EA +I +
Sbjct: 561 LDGSGMAE----KTARPWHAIQEYGPYRFFNIEGSHQQNEQTKSLYNYAEAKIALEIVSD 616
Query: 814 FIRC---GMKPEQIGVITPYEGQ----RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGR 866
P +IG+I+PY+ Q R VQ + I +EI+ +VD FQG+
Sbjct: 617 LFALFPDEQWPGKIGIISPYKEQIRCIREVFVQKFGF------PITKEIDFNTVDGFQGQ 670
Query: 867 EKDLIIMSCVRSND-HQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
EKD+++ SCVR+ + + G+GFL D RR+NVALTRA+ + V+G+ + L W +L++
Sbjct: 671 EKDIVLFSCVRAGEQNSGVGFLGDVRRMNVALTRARSSLWVLGSRETLMSNKTWRDLID 729
>gi|50309513|ref|XP_454766.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643901|emb|CAG99853.1| KLLA0E18085p [Kluyveromyces lactis]
Length = 681
Score = 200 bits (509), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 160/517 (30%), Positives = 260/517 (50%), Gaps = 71/517 (13%)
Query: 451 STSFDRMQLALRKFA----VDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLN 506
+ ++ RMQ +RK A + D + Y+ H E F P+H LN
Sbjct: 152 TITYKRMQSTMRKLAEFNSIPDNILIQYMLH--------ERKFIKKDPEHNVKFYNEQLN 203
Query: 507 RSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTE 566
SQ A++H++ +S+I GPPGTGKT T ++ QL + G +LVC PSNI+VD + E
Sbjct: 204 ESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDR-GERILVCGPSNISVDTILE 262
Query: 567 KIHRT--GLKVVRVCAKSR---EAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGEL 621
++ + G +++R+ SR + + + L+ M + +K++ +L
Sbjct: 263 RLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGD-SGMILKDIMKEIDDTIASVKKL 321
Query: 622 SSADEKR-----YRMLKK---NAEKSLLDN----ADVICCTCVGAGDPRLLKIK------ 663
S+ +++ + L+K EKS L N + ++ CT G+ LL
Sbjct: 322 KSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKL 381
Query: 664 FHSILIDESMQATEPECMVPVILGAK----QLILVGDHCQLGPVVMCKKAARAG--LSQS 717
F++++IDE Q+ EP+C +P+I K +LI+ GD QL P + + + LS +
Sbjct: 382 FNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTT 441
Query: 718 LFERLVVLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV 775
+F+RL+ F+ L VQYRM+ E+ +F SN Y+G L+ ++ L+ D P
Sbjct: 442 VFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLA--DLPGVE 499
Query: 776 PDK----PMLFYVTQGQEEIAGSG-------------TSYVNRTEASNVEKITTRFIRCG 818
+ P ++ T+G + S +S N EA + I+ G
Sbjct: 500 SNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAG 559
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS 878
+ E IGVI+PY Q + L + + + +Q IE+++VD FQGREK+ II+S VRS
Sbjct: 560 VTEESIGVISPYNSQVSLLKKLIHEK-------HQAIEISTVDGFQGREKECIILSLVRS 612
Query: 879 NDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
N++ +GFL D RRLNVA+TR K + VIGN ++LS+
Sbjct: 613 NENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
>gi|255571556|ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223533913|gb|EEF35638.1| DNA-binding protein smubp-2, putative [Ricinus communis]
Length = 644
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 148/457 (32%), Positives = 231/457 (50%), Gaps = 48/457 (10%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+L+ SQ A+ A+ + + L+ GPPGTGKT T I+ Q VK+ G+ +L CA SNIAVD
Sbjct: 193 NLDHSQKDAISKALSSKDVFLLHGPPGTGKTTTVVEIILQEVKR-GAKILACAASNIAVD 251
Query: 563 QLTEKIHRTGLKVVRVCAKSR-------EAIDSPV---SFLALHNQIRNMEMNSELKKLL 612
+ E++ +K+VR+ +R A+D+ V +L N IR EM + KLL
Sbjct: 252 NIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLKGDNSSLANDIRK-EMKALNGKLL 310
Query: 613 QLKE---------ETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK 663
+ K+ E LS + KR ++ A ++ NADV+ T GA +L
Sbjct: 311 KTKDKSTRRDIQKELRTLSKEERKRQQL----AVTDVIKNADVVLTTLTGALSHKLDNTS 366
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA E C + ++ G++ IL GDH QL P + +A + GL ++LFERL
Sbjct: 367 FDLVIIDEAAQALEIACWIALLKGSR-CILAGDHLQLPPTIQSVEAEKKGLGRTLFERLA 425
Query: 724 VLGIRPFR--LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID-FPWPVPDKPM 780
L L VQYRMH + + S Y ++ LS ++ +P
Sbjct: 426 DLYGDEVTSMLTVQYRMHELIMTWSSKELYNSKIKAHPSIAAHMLSDLEGVKRSSATEPT 485
Query: 781 LFYVTQGQEEIAG--------SGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEG 832
L + +IAG S +N EA R + G++ IG+ITPY
Sbjct: 486 LLLI-----DIAGCDMEEKKDEEESTLNEGEADVAVAHAKRLVENGVQASDIGIITPYAA 540
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
Q L + L +++E+++VD FQGREK+ II+S VRSN + +GFL+D RR
Sbjct: 541 QVVLLKILRSNEDKL-----KDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRR 595
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+NVA+TRA+ ++ + + ++ L+ +++E
Sbjct: 596 MNVAVTRARRQCCLVCDTETVTSDGFLKRLIEYFEEH 632
>gi|303286453|ref|XP_003062516.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456033|gb|EEH53335.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 648
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 227/444 (51%), Gaps = 44/444 (9%)
Query: 503 PDLNRSQVYAVKHAIQR-PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P L+ SQ AV HA++ L+LI GPPGTGKT V + V + G+ +L CA SN+AV
Sbjct: 193 PRLDASQKDAVAHALRAVDLALIHGPPGTGKTTVVVEYVAREVAR-GARILCCAASNVAV 251
Query: 562 DQLTEKIHRT------GLKVVRVCAKSREA--IDSPVSFLALHNQIRNMEMNSELKKLLQ 613
D L E++ R + V S EA + S S LA + + + L KL
Sbjct: 252 DNLVERLARITRLGHPARLLASVLENSLEAQVLRSDNSSLARDCERESAALRRRLLKLAD 311
Query: 614 LKEETGELSS-----ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRL---LKIKFH 665
K G S A E R R ++ A ++ +A+V+CCT GA L + F
Sbjct: 312 AKTREGAFSLELRRLAKETRAR--QRLAVDEVVASANVVCCTLAGALGGVLKDQARSTFD 369
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
++IDE+ QA E C ++ G K ++L GDH QL P V+ AAR GLS++LF+R
Sbjct: 370 VVVIDEAAQALEASCWGAIMRGGK-VVLAGDHLQLPPTVLSDVAAREGLSETLFQRAHAK 428
Query: 726 GIR---PFRLEVQYRMHPELSK---FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKP 779
R L QYRMH ++ + + SN Y+G+L + +++ + + P
Sbjct: 429 WYRENVAVMLTTQYRMHEDIMRRVLWASNAMYDGAL---LASEDARGRTLRSASGAPLGA 485
Query: 780 MLFYVTQG------QEEIAGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEG 832
+ T G QEE G S N EA+ +I I G + + +G+ITPY
Sbjct: 486 LQLVDTAGCDCDERQEE---EGASRDNPGEAAVAMRIVADLISSGAVAADDVGIITPYSA 542
Query: 833 QRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
Q L +L ++ +E+++VD FQGREK+ I++S VRSND +GFL+D RR
Sbjct: 543 QVGTLRDLRAANDAL----FKGVEISTVDGFQGREKEAIVISAVRSNDRGDVGFLSDARR 598
Query: 893 LNVALTRAKYGIIVIGNPKVLSKQ 916
+NVA+TRA+ +++ + + ++++
Sbjct: 599 MNVAVTRARARCVLVCDTETIARK 622
>gi|118380994|ref|XP_001023659.1| hypothetical protein TTHERM_00732610 [Tetrahymena thermophila]
gi|89305426|gb|EAS03414.1| hypothetical protein TTHERM_00732610 [Tetrahymena thermophila SB210]
Length = 1342
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 146/508 (28%), Positives = 240/508 (47%), Gaps = 33/508 (6%)
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG--HNVDEVLFRCHLPKHFSAPNLP-D 504
I+ T +RMQ ALR F + +S I H + ++ R + + A N
Sbjct: 844 IFSRTQHERMQDALRVFCFESRSAHPAIMHTICTPPGQTSHIIKRLSNQEQYKATNTKTQ 903
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN Q AV+ A ++++QGPPG+GKT + IV + ++ + P+LV A S V+ +
Sbjct: 904 LNAEQQLAVEKAALNRITIVQGPPGSGKTTAAVEIVLEWLRASNQPILVTAESQGTVNII 963
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLAL---HNQIRNMEMNSELKKLLQLKEETGEL 621
++ + +K V + + +D ++ H I+ ++ S+ K L K +
Sbjct: 964 YGELIKANVKAVTIGPGFEDRLDHINEIISKPDGHEPIQ--KLTSKDGKHLAPKPQEYIP 1021
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
+S ++ +LKK +L A V+CCTC L + F ++IDE+ +EP +
Sbjct: 1022 NSM---KFLILKK-----MLREAQVVCCTCQTVMADYLKGLHFTRVIIDEANTVSEPLSL 1073
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPE 741
+P+ QL+L+GDH Q P A G+ SLFE+L+ G +P L+ QYR+
Sbjct: 1074 IPIHRLCNQLVLIGDHMQSSPKSQSMFAQSKGMCMSLFEKLISQGFKPHLLKTQYRVAAN 1133
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
F S +FY L+NG+ +E K FPWP P +GQE+ N
Sbjct: 1134 QMIFQSRYFYNNMLENGI-VEEFKPELRGFPWPNPAIKSCVIFVKGQEQATQLIEQLQNP 1192
Query: 802 TEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQG----SLPAKIYQE-- 854
EA V +I ++ G +K IG++T ++ Q+ + + Q S+ + +E
Sbjct: 1193 KEAEVVVEILLNILKAGYIKQSDIGIVTTFDEQKKRIRSEINTQAKKHPSMFSLTIEETL 1252
Query: 855 --------IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
I++ +V+ +K+LII S VRSN H +G L DPR LN L K GII+
Sbjct: 1253 RITKHSTLIDIETVEKANLMDKELIIFSPVRSNKH-AMGILRDPRLLNTVLWSGKRGIII 1311
Query: 907 IGNPKVLSKQPLWNNLLNFYKEQKVLVE 934
I + L + P W + K ++++
Sbjct: 1312 IADIDTLGQDPHWKEYYKWAKTNNLILQ 1339
>gi|150020793|ref|YP_001306147.1| putative DNA helicase [Thermosipho melanesiensis BI429]
gi|149793314|gb|ABR30762.1| putative DNA helicase [Thermosipho melanesiensis BI429]
Length = 643
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 156/485 (32%), Positives = 243/485 (50%), Gaps = 81/485 (16%)
Query: 504 DLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
+LN Q A+ A++ SLI GP GTGKT T A + Q K+ G +LV A SN+AVD
Sbjct: 166 NLNEYQKLAISKALKSEDFSLIHGPFGTGKTRTLAEYILQEAKK-GKKILVTADSNLAVD 224
Query: 563 QLTEKIHRTGLKVVRVCAKSR----EAIDSPVSFLALHNQIRNME-MNSELKKLLQLKEE 617
L E++ + + VR+ SR S + + HN+ + +E + +KL+Q +E
Sbjct: 225 NLVERLSES-ISHVRIGHPSRISSHLLSSSLMYKIQTHNKYKEIEKLKKTFEKLIQERES 283
Query: 618 --------------------------------------------TGELSSADEKRYRMLK 633
++ + E Y+ ++
Sbjct: 284 FQKPIPKWKRGLTDKQILKLAENNKSQRGIPLKIIKDMAKWIKLNEKIETIKENIYK-IE 342
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLIL 693
+ K +++N+ V+ T A L +F +++DE+ Q+T P ++P+ G K+ +L
Sbjct: 343 EEISKDIINNSMVVFTTNSSAYIDILKDYEFDVVVVDEATQSTIPSVLIPLSKG-KKFVL 401
Query: 694 VGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR---LEVQYRMHPELSKFPSNFF 750
GDH QL P ++ +KA LS +LFE L+ P + L++QYRM+ L +FP+ F
Sbjct: 402 AGDHKQLPPTILSEKAKE--LSTTLFEMLI--KKYPQKSEILKIQYRMNERLMEFPNKEF 457
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVP----DKPMLFYVT---QGQEEIAGSGTSYVNRTE 803
Y L +GV L ++F P + ++F T + EE TSY+N+ E
Sbjct: 458 YNNLLISGV--KNITLKDLNFKGKTPLTNYENVLIFIDTSCLENYEEQRKDSTSYINKLE 515
Query: 804 ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
A+ ++ I FI G K E IGVI+PY+ Q L++ + I+V +VD F
Sbjct: 516 ANVIKNIVESFINEGAKREWIGVISPYDDQ-VELIRSFDLK----------IDVNTVDGF 564
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
QGREK++I++S VRSN + +GFLND RRLNV+LTRAK +I+IGN L K + L+
Sbjct: 565 QGREKEIILISFVRSNKNGELGFLNDLRRLNVSLTRAKRKLILIGNSNTLIKNQTYKRLI 624
Query: 924 NFYKE 928
NF K+
Sbjct: 625 NFIKK 629
>gi|395331022|gb|EJF63404.1| hypothetical protein DICSQDRAFT_102653 [Dichomitus squalens LYAD-421
SS1]
Length = 1922
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 204/740 (27%), Positives = 316/740 (42%), Gaps = 166/740 (22%)
Query: 331 GDGYQYQNIFGPLVKLE-------------ADYDKRLKESQ-TQENVTVRWDVGLNKKSI 376
GD +++++ P++ LE +D R+ Q T E + + +V +
Sbjct: 1107 GDYAHFRSVYEPMLFLELWNQLVESKEQPLESHDCRILSRQYTDEYIDL--EVSIEGSVG 1164
Query: 377 AYFSLAKTDGDMRLMQGDELKLRY-----SYDASKTWSGLGHVIKIPDNFGDEVGLELKS 431
+SLA+TD + L+ K R SY AS G + + +
Sbjct: 1165 KEWSLAETD--IVLLSSSNAKRRVLGKAQSYRAS--------------YIGIQATIRYLA 1208
Query: 432 SAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC 491
S G P G V W + +R++ ++ A ++ LL + + R
Sbjct: 1209 SGGDP-----GLQVGTSWSLAKVLSLSTIIREYG----ALMALPHYDLL-----DSILRT 1254
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAIQRP-------------LSLIQGPPGTGKTVTSAT 538
LPK PN D Q + + P +LIQGPPGTGKT T
Sbjct: 1255 QLPK----PNKVDSGEVQRVMKAYNVNEPQANAILKSLDTEGFALIQGPPGTGKTSTICG 1310
Query: 539 IVYQLV----KQTGSP--------VLVCAPSNIAVDQLTEKI--------HRT-GLKVVR 577
+V + K G P +L+CAPSN A+D++ ++ HR KVVR
Sbjct: 1311 LVQLYLSRRSKTIGRPGDKEIPKKILLCAPSNAAIDEIAFRLKEGVSGAGHRAEHPKVVR 1370
Query: 578 V--------------------------------------CAKSREAIDS-------PVSF 592
+ A+ R ++S +
Sbjct: 1371 IGAPKAMNLSVRDVSLEYLMDQKLNAHPELQNTKEAGTELARVRAELESVKVQRQQKMDE 1430
Query: 593 LAL--HNQIRNMEMNSELKKLLQLKEE-TGELSSADEKR---YRML---KKNAEKSLLDN 643
+AL N + + + ++KKL + K T +L +K+ YR L ++ +L
Sbjct: 1431 MALTHDNAAKTLALEDDIKKLNRAKAMLTHQLDKVKDKQKSDYRTLDATRRRFRNEVLQE 1490
Query: 644 ADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPV 703
ADVIC T + L F ++IDE+ QA E ++P+ + I+VGD QL P
Sbjct: 1491 ADVICSTLSASAYEYLESFDFEVVIIDEAAQAIELSSLIPMKYRCRTCIMVGDPQQLPPT 1550
Query: 704 VMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQNGVCAD 762
V ++A R G QSLF RL L +QYRMHP++S+ PSN FY+G L +G
Sbjct: 1551 VKSQEACRLGYDQSLFVRLQKSQPDAVHLLSIQYRMHPDISQLPSNLFYDGRLSDG---- 1606
Query: 763 ERKLSKIDFPW---PVPDKPMLFYVTQGQEE-IAGSGTSYVNRTEASNVEKITTRFIRCG 818
+K PW P F V G EE + G+G S VNR+EA + R I+
Sbjct: 1607 PEMAAKTKRPWHNHPKFGTYRFFSVESGTEENMPGTGHSLVNRSEAQVAVALYNRLIKEF 1666
Query: 819 MKPE---QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
+ ++GVI+ Y GQ L + ++ ++ ++ +VD FQG+EKD+II+SC
Sbjct: 1667 SSTDFDFKVGVISMYRGQIVELKR--AFRQRFGEEVLSTVDFNTVDGFQGQEKDIIILSC 1724
Query: 876 VRSNDH-QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNLLNFYKEQKVLV 933
VRS Q +GFL D RR+NVALTRAK + V+GN L + +W +++ + + L+
Sbjct: 1725 VRSGPSLQTVGFLRDVRRMNVALTRAKASLFVLGNAPTLERSDDIWRKIVDNARSRTSLI 1784
Query: 934 EGPLNNLKESLILFSKPKQY 953
K + F+ P Y
Sbjct: 1785 -------KADVAYFTAPNTY 1797
>gi|241953325|ref|XP_002419384.1| helicase, putative; tRNA-splicing endonuclease positive effector,
putative [Candida dubliniensis CD36]
gi|223642724|emb|CAX42978.1| helicase, putative [Candida dubliniensis CD36]
Length = 2009
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 171/551 (31%), Positives = 261/551 (47%), Gaps = 110/551 (19%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQL----------VKQTGSP-- 550
+N SQ A+ + SLIQGPPGTGKT T IV Y L + ++GS
Sbjct: 1298 VNDSQARAIMGTFKSEGFSLIQGPPGTGKTKTILGIVGYSLSQEKNKKVIDISESGSSPA 1357
Query: 551 ------VLVCAPSNIAVDQLTEKIHRTG----------LKVVRVCAKSREAIDSPVSFLA 594
+L+CAPSN AVD+L ++ R G LKVVR+ +AI+S V L
Sbjct: 1358 PSDKAKILICAPSNAAVDELVLRL-RDGVRNSSGEHMPLKVVRL--GRSDAINSSVRDLT 1414
Query: 595 LHN------QIRNMEM----------------NSELKKLL--------QLKEETGELSSA 624
L Q + E+ EL+K L + E ++ +
Sbjct: 1415 LEELVDKELQTKQTEVVIDPNIRLEHTKCINERDELRKRLATESLEDKDITELEEKIRAI 1474
Query: 625 DEKRYRMLKK--------------------NAEKSLLDNADVICCTCVGAGDPRL--LKI 662
++KR + KK N + +L A V+C T G+ + L +
Sbjct: 1475 NKKRSELAKKLDEQREKASIANRTKEINRRNIQARILSEAQVLCSTLSGSAHDLVANLSV 1534
Query: 663 KFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
+F ++IDE+ Q E ++P+ G ++ I+VGD QL P V+ + AA QSLF R+
Sbjct: 1535 QFDQVIIDEACQCLELSAIIPLRYGCRKCIMVGDPNQLPPTVLSQAAASYNYEQSLFVRM 1594
Query: 723 VVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW--PVPD 777
P + L+VQYRMHP +SKFPS+ FY L++G + L PW P
Sbjct: 1595 Q--KNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDG----DNMLELNTRPWHKDPPL 1648
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQR 834
P F+ G+ E S N EA ++T + ++ + + +G+I+PY+ Q
Sbjct: 1649 TPYRFFDILGKHEKNELTRSLFNTDEAMVALQLTDKLMQIIPQDKFSGNVGIISPYKEQI 1708
Query: 835 AFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLN 894
+ + + P I EI+ +VD FQG+EK++IIMSCVR++ +GFL+D RR+N
Sbjct: 1709 RKIKEVFVRKYGKP--ILDEIDFNTVDGFQGQEKEIIIMSCVRASATGNVGFLSDVRRMN 1766
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG---------PLNNLKESLI 945
VALTRAK + ++GN + LS+ +W LL E+K + + P+ KE+ +
Sbjct: 1767 VALTRAKTTLWILGNKESLSRNEVWRKLLTDADERKCVTQAYPGFLNSSNPVLKRKEASV 1826
Query: 946 LFSKPKQYFKK 956
++Y KK
Sbjct: 1827 FIPPQEKYAKK 1837
>gi|426252598|ref|XP_004019993.1| PREDICTED: DNA-binding protein SMUBP-2 [Ovis aries]
Length = 874
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 242/492 (49%), Gaps = 44/492 (8%)
Query: 471 VSAYIYHRLLGHNVDEVLFRCHLPKHFS-APNL----PDLNRSQVYAVKHAI-QRPLSLI 524
+S YH ++ EVLF P S P L P L+ SQ AV A+ Q+ L++I
Sbjct: 139 ISLKKYHSGPASSLIEVLFGTADPSPPSEMPPLTFCNPALDASQQEAVLFALSQKELAII 198
Query: 525 QGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSR- 583
GPPGTGKT T I+ Q VK+ GS VL CAPSN+AVD L E++ + +++R+ +R
Sbjct: 199 HGPPGTGKTTTVVEIILQAVKR-GSKVLCCAPSNVAVDNLVERLAQWKQRILRLGHPARL 257
Query: 584 ------EAIDSPVS----FLALHNQIRNMEMNSELKKLLQLKEETGELSSADEKRYRMLK 633
++D+ ++ + + R+++ + Q K E + + LK
Sbjct: 258 LDSIQQHSLDAVLARSDGARIVADIRRDIDQAWAKNRKTQDKREKSNFRDEIKLLRKELK 317
Query: 634 KNAEKSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEPECMVPVIL 686
E ++L++ A VI T GA LK+ F ++IDE QA E C +P +L
Sbjct: 318 DREEAAMLESLAAASVILATNTGASADGPLKLLPDGHFDVVVIDECAQALEASCWIP-LL 376
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQYRMHPELSK 744
A++ IL GDH QL P ++ KAA AGLS SL ERL G R L VQYRMH +++
Sbjct: 377 KARKCILAGDHKQLPPTIVSHKAALAGLSLSLMERLAERHGAGAVRMLTVQYRMHQAIAR 436
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQG---QEEIAGSGTS 797
+ S Y G L L D P + P+L T G E S
Sbjct: 437 WASEALYHGQLTAHPSVAGHLLR--DLPGVAATEETGVPLLLVDTAGCGLLELEEDDEQS 494
Query: 798 YVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
N E V + G++ I VITPY Q L Q++ ++ + E+E+
Sbjct: 495 KGNPGEVRLVGLHVQALVDAGVRAADIAVITPYNLQVDLLRQNLAHR-------HPELEI 547
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
SVD FQGREK+ +I+S VRSN +GFL + RR+NVA+TRA+ + V+ + + +S
Sbjct: 548 RSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSRTVSNHA 607
Query: 918 LWNNLLNFYKEQ 929
L+++ E
Sbjct: 608 FLKTLVDYLTEH 619
>gi|302824127|ref|XP_002993709.1| hypothetical protein SELMODRAFT_137449 [Selaginella moellendorffii]
gi|300138433|gb|EFJ05201.1| hypothetical protein SELMODRAFT_137449 [Selaginella moellendorffii]
Length = 823
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 224/454 (49%), Gaps = 72/454 (15%)
Query: 505 LNRSQVYAVKHAIQR---PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV-LVCAPSNIA 560
LN Q+ AV+ + + P +I GPPGTGKTVT + Q+ + V L CAPSN A
Sbjct: 368 LNEEQMSAVQEIVAKRGAPPYIIFGPPGTGKTVTVVEAILQVRRHNKDAVILACAPSNNA 427
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSELKKLLQLKEETGE 620
D L E++ + F+ + +R +N+ + + ++ E
Sbjct: 428 SDLLLERLAK---------------------FVENRHMLR---LNAFTRSRADIPDKVKE 463
Query: 621 LSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK------FHSILIDESMQ 674
S+ D + E L + +I TC+ AG +L + F I +DES Q
Sbjct: 464 FSNGDGSPFANCPSREE---LMSFKIIVTTCMSAG---MLHSRGVPAGHFSHIFLDESGQ 517
Query: 675 ATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLG--IRP 729
TEPE MV I A L+L GDH QLGPV+ +A + GLS+S ERL+ P
Sbjct: 518 PTEPEAMVAAINFAAPSTVLVLAGDHQQLGPVIRSSRADKFGLSKSFLERLISSPPYTPP 577
Query: 730 FRLEV------QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PML 781
F+ E+ YR HP + PS FY+G L CA E S ++ W +P+K P+L
Sbjct: 578 FKKEMVTKLVRNYRSHPSILDLPSRLFYQGELVP--CAGEFSRSLCEWGW-LPNKKFPIL 634
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RCGMKPEQIGVITPYEGQRAFLV 838
F +G++ G+ S+ N E S V ++ R P +IG+ITPY Q V
Sbjct: 635 FIGVEGKDLREGNSPSWFNAAEVSKVMEVVKSLRDMRRNKPLPTEIGIITPYRKQ----V 690
Query: 839 QHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS-------NDHQGIGFLNDPR 891
Q ++ G L + EI+V SV+ FQG+EK II+S VRS + +GFL +P+
Sbjct: 691 QKIK--GFLSKERLAEIKVGSVEEFQGQEKRAIIVSTVRSSLEFLGHDKKFNLGFLFNPK 748
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
R NVA+TR + ++V+GNP +LSK WN + +
Sbjct: 749 RFNVAITRPQALLVVVGNPGILSKNEHWNKFMRY 782
>gi|397643570|gb|EJK75950.1| hypothetical protein THAOC_02313 [Thalassiosira oceanica]
Length = 833
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 216/447 (48%), Gaps = 39/447 (8%)
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV-------------KQTGSPVL 552
N SQ AV A+ R L LI+GPPGTGKT +A ++ ++T VL
Sbjct: 339 NESQREAVVWALSRRLGLIRGPPGTGKTRVAALLIATACALRPDSVEEDTEERETPRRVL 398
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSE-LKKL 611
SN A D L + + GL VR R A SP Q R + SE + +
Sbjct: 399 AVTHSNGAADVLLQALLNIGLPAVRA---GRAANVSP------SLQYRTIAALSEQMPDV 449
Query: 612 LQLKEETGELSSADEKR------YRMLKKNAEKSLLDNADVICCTCVGA-------GDPR 658
++L++ + ++R R + A+ + +A V+ +C+GA G +
Sbjct: 450 VRLRQRASDTRLEHDERQSSLYDARQCQDEAQTVIARSAQVVVASCIGAAQLMSSLGTSK 509
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILG-AKQLILVGDHCQLGPVVMCKKAA-RAGLSQ 716
F +++DE+ Q TEP + V A Q++L+GD QL P V + A R +
Sbjct: 510 DDAPLFDLVVLDEAGQTTEPALISAVTASKANQVVLIGDTKQLPPTVTSQDAELRRTVGI 569
Query: 717 SLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVP 776
S ERL++ G+ F L QYRM L + P+++FY+ ++ + FPWP
Sbjct: 570 SPMERLLMNGVEEFTLREQYRMPACLLRHPNHYFYDSVVKCATDPADEPDPPRGFPWPNT 629
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRA 835
+P+ F EI + N E + +I R +R G ++ + + +I+PY Q
Sbjct: 630 KEPLAFVEIGNDSEIVHNFGGRSNPLEVDIIMEIVKRVVRAGEIETQNLSIISPYSKQVQ 689
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
+ H+ L Y + V +VD+FQG+E DL I SCVRSN + +GFL D RRLNV
Sbjct: 690 LIKTHLANASLLSRHDYSGVRVGTVDSFQGQETDLAIFSCVRSNLMKELGFLRDARRLNV 749
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNL 922
A+TRA+ G+IV+G+PK L W+ L
Sbjct: 750 AITRARRGLIVVGDPKPLRTCKHWSAL 776
>gi|164429654|ref|XP_964658.2| hypothetical protein NCU02036 [Neurospora crassa OR74A]
gi|157073565|gb|EAA35422.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 682
Score = 199 bits (507), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 246/531 (46%), Gaps = 110/531 (20%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVK----------QTGSP-- 550
+LN Q A+ +A + +LIQGPPGTGKT T +V L+ G P
Sbjct: 5 NLNPGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPTAGVAIGRPGL 64
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGLK----------VVRVCAKSREAIDSP 589
+LVCAPSN AVD+L ++ + G+K VVR+ +AI+S
Sbjct: 65 GAAKNNAPAKKLLVCAPSNAAVDELVLRL-KNGVKTQNGTTHQIEVVRLGRS--DAINSA 121
Query: 590 VSFLALHNQIRNMEMNSELKK------LLQLKEETGELSSA------------------- 624
V + L +++ ++ ++L K +L +E GE+
Sbjct: 122 VKDVTL-DELVKAKLEAQLNKDEGPTDREKLHQEAGEIKQKIAELRPQLEAARTIDDRQL 180
Query: 625 --------DEKRYR-----------------------MLKKNAEKSLLDNADVICCTCVG 653
DE + R + ++ ++ +LD A V+C T G
Sbjct: 181 VNKYQREFDELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEILDKAQVLCATLSG 240
Query: 654 AGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
+G L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR
Sbjct: 241 SGHEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAAR 300
Query: 712 AGLSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
G QSLF R+ + L + QYRMHPE+S FP FYEG LQ+G D+ S++
Sbjct: 301 YGYDQSLFVRMQKNHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDG---DDMAKSRLQ 357
Query: 771 FPWPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI----RCGMKPEQI 824
PW P F+ +G +E S VN E ++ RF +K +I
Sbjct: 358 -PWHRSTLLGPYRFFDVRGSQERGPKNQSLVNEEELKVAMQLYRRFKADYGNVDLK-GKI 415
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+ITPY+ Q L Q+ I EIE + DAFQGRE ++II SCVR++ GI
Sbjct: 416 GIITPYKAQLYRL--RSQFAQRFGDAITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGI 473
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
GF+ D RR+NV LTRA+ + ++G+ + L + W L+ K + G
Sbjct: 474 GFMTDIRRMNVGLTRARSSLWILGDSRALMQGEFWAKLIEDSKRRDRYTTG 524
>gi|109105146|ref|XP_001117732.1| PREDICTED: DNA-binding protein SMUBP-2-like [Macaca mulatta]
Length = 920
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 275/583 (47%), Gaps = 87/583 (14%)
Query: 412 GHVIKIPDNF---GDEVGLELKSSAGAPTEATTGFSVDFIWKSTS--FDR---MQLALR- 462
G V +P N GD VGL ++ G ++ TG KS + FD QL+L
Sbjct: 73 GSVAALPSNSFTSGDIVGLYDAANEG--SQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 463 -------KFAVD-------DQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL-----P 503
K A D ++ YH ++ EVLF P S +
Sbjct: 131 ENSYRLLKLANDVTYRRLKKTLIALKKYHSGPASSLIEVLFGRSAPSSASEIHPLTFFNT 190
Query: 504 DLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
L+ SQ AV A+ Q+ L++I GPPGTGKT T I+ Q VKQ G VL CAPSNIAVD
Sbjct: 191 SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQ-GLKVLCCAPSNIAVD 249
Query: 563 QLTEKIHRTGLKVVRVCAKSR--EAIDSPVSFLALHNQIRNMEMNSELKKLL-------- 612
L E++ +++R+ +R E+I S A+ + + ++ ++++K +
Sbjct: 250 NLVERLALCKQRILRLGHPARLLESIQQH-SLDAVVARSDSAQIVADIRKDIDQVFVKNK 308
Query: 613 --QLKEETGELSSADEKRYRMLKKNAEKSLLDN---ADVICCTCVGAGDPRLLKI----K 663
Q K E + + + LK E ++L++ A+V+ T GA LK+
Sbjct: 309 KTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASADGPLKLLPESH 368
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE QA E C +P +L A++ IL GDH QL P V+ KAA AGLS SL ERL
Sbjct: 369 FDVVVIDECAQALEASCWIP-LLKARKCILAGDHKQLPPTVVSHKAALAGLSLSLMERLA 427
Query: 724 V-LGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQN-------------GVCADERKLSK 768
G R R L VQYRMH + ++ S+ Y G L GV A E +
Sbjct: 428 EEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTAHPSVAGHLLRDLPGVAATE----E 483
Query: 769 IDFPWPVPDKPM--LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGV 826
P + D LF + + E+ G N E V + G+ + V
Sbjct: 484 TGVPLLLVDTASCGLFELEEEDEQSKG------NPGEVRLVSLHIQALVDAGVPARDVAV 537
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
++PY Q L Q + ++ + E+E+ SVD FQGREK+ +I+S VRSN +GF
Sbjct: 538 VSPYNLQVDLLRQSLAHR-------HPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGF 590
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
L + RR+NVA+TRA+ + VI + + ++ L+ ++ +
Sbjct: 591 LAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQH 633
>gi|350297309|gb|EGZ78286.1| hypothetical protein NEUTE2DRAFT_102083 [Neurospora tetrasperma FGSC
2509]
Length = 2078
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 163/529 (30%), Positives = 245/529 (46%), Gaps = 106/529 (20%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVK----------QTGSP-- 550
+LN Q A+ +A + +LIQGPPGTGKT T +V L+ G P
Sbjct: 1313 NLNPGQAKAILNAKENDGFTLIQGPPGTGKTKTIVAMVGCLLTGVLKNPSAGVAIGRPGL 1372
Query: 551 -----------VLVCAPSNIAVDQLTEKIHRTGLKV-------VRVCAKSR-EAIDSPVS 591
+LVCAPSN AVD+L ++ + G+K + V R +AI+S V
Sbjct: 1373 GAAKNNAPAKKLLVCAPSNAAVDELVLRL-KNGVKTQNGTTHQIEVVRLGRSDAINSAVK 1431
Query: 592 FLALHNQIRNMEMNSELKK------LLQLKEETGELSSA--------------------- 624
+ L +++ ++ ++L K +L +E GE+
Sbjct: 1432 DVTL-DELVKAKLEAQLNKDEGPTDREKLHQEAGEIKQKIAELRPQLEAARTIDDRQLVN 1490
Query: 625 ------DEKRYR-----------------------MLKKNAEKSLLDNADVICCTCVGAG 655
DE + R + ++ ++ +LD A V+C T G+G
Sbjct: 1491 KYQREFDELKRRQAHIGARIDADKASGNTFARETEIKRRQVQQEILDKAQVLCATLSGSG 1550
Query: 656 DPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
L ++F +++IDE+ Q E ++P+ G + ILVGD QL P V+ + AAR G
Sbjct: 1551 HEMFKNLNVEFETVIIDEAAQCVELSALIPLKYGCSKCILVGDPKQLPPTVLSQSAARYG 1610
Query: 714 LSQSLFERLVVLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
QSLF R+ + L + QYRMHPE+S FP FYEG LQ+G D+ S++ P
Sbjct: 1611 YDQSLFVRMQKNHEKDVHLLDTQYRMHPEISSFPRAAFYEGLLQDG---DDMAKSRLQ-P 1666
Query: 773 WPVPD--KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI----RCGMKPEQIGV 826
W P F+ +G +E S VN E ++ RF +K +IG+
Sbjct: 1667 WHRSTLLGPYRFFDVRGSQERGPKNQSLVNEEELKVAMQLYRRFKADYGNVDLK-GKIGI 1725
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
ITPY+ Q L Q+ I EIE + DAFQGRE ++II SCVR++ GIGF
Sbjct: 1726 ITPYKAQLYRL--RSQFAQRFGDTITDEIEFNTTDAFQGRECEIIIFSCVRASPTGGIGF 1783
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
+ D RR+NV LTRA+ + ++G+ + L + W L+ K + G
Sbjct: 1784 MTDIRRMNVGLTRARSSLWILGDSRALMQGEFWAKLIEDSKRRDRYTTG 1832
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,252,853,623
Number of Sequences: 23463169
Number of extensions: 658608075
Number of successful extensions: 1814053
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3843
Number of HSP's successfully gapped in prelim test: 3380
Number of HSP's that attempted gapping in prelim test: 1782951
Number of HSP's gapped (non-prelim): 15371
length of query: 959
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 806
effective length of database: 8,769,330,510
effective search space: 7068080391060
effective search space used: 7068080391060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)