Your job contains 1 sequence.
>psy3251
MSVDAYGPSSQTLTFLDTEETDLIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN
GKQNLDNSNLNLVSQKLHELQFEEEEDDGNEFFNKELPPHACKYCGIHDPAYVIMCNICK
KWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKA
DSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQ
IAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLK
ESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQ
ENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDN
FGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLL
GHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV
YQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIR
NMEMNSELKKLLQLKEETGELSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL
KIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE
RLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM
LFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH
MQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRA
KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3251
(959 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 2550 0. 2
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 2541 0. 3
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 2536 0. 2
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 2512 0. 3
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 2512 0. 3
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 2512 0. 3
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 2512 0. 3
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 2498 0. 2
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 2182 0. 3
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 2134 2.1e-310 2
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 2094 7.4e-306 2
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 1949 1.5e-274 2
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 1785 4.2e-261 2
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 1789 2.2e-255 2
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 1788 4.0e-254 2
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 1788 4.0e-254 2
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 1652 6.2e-238 2
RGD|1589127 - symbol:LOC684558 "similar to regulator of n... 795 4.2e-79 1
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 435 1.1e-57 3
SGD|S000000978 - symbol:ECM32 "DNA dependent ATPase/DNA h... 433 1.1e-56 3
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 566 3.3e-54 1
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 482 3.1e-50 2
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 504 1.5e-49 2
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 503 1.6e-48 3
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 500 5.3e-47 1
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 502 6.0e-47 2
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 470 1.0e-46 3
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 477 3.6e-46 3
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 463 4.5e-46 3
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 426 4.5e-46 2
GENEDB_PFALCIPARUM|MAL7P1.12 - symbol:MAL7P1.12 "erythroc... 534 1.1e-45 2
UNIPROTKB|Q8IC35 - symbol:MAL7P1.12 "Erythrocyte membrane... 534 1.1e-45 2
ZFIN|ZDB-GENE-070424-144 - symbol:si:ch211-183d5.1 "si:ch... 398 1.2e-45 2
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 442 9.7e-45 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 450 2.2e-44 4
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 360 2.9e-44 2
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 460 3.5e-44 4
TAIR|locus:2200996 - symbol:SDE3 "SILENCING DEFECTIVE" sp... 388 8.7e-44 2
TAIR|locus:2173033 - symbol:AT5G52090 species:3702 "Arabi... 420 5.6e-43 2
TAIR|locus:2059088 - symbol:AT2G19120 "AT2G19120" species... 445 7.2e-43 4
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 434 1.2e-42 4
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 482 1.3e-42 1
TAIR|locus:2126480 - symbol:AT4G30100 species:3702 "Arabi... 443 2.6e-42 4
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 479 2.8e-42 1
TAIR|locus:2166163 - symbol:AT5G37140 species:3702 "Arabi... 405 7.9e-42 2
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 474 9.9e-42 1
ZFIN|ZDB-GENE-070912-617 - symbol:si:dkey-97a13.6 "si:dke... 391 1.0e-41 2
TAIR|locus:2166173 - symbol:AT5G37150 species:3702 "Arabi... 415 1.4e-41 3
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 469 4.7e-41 1
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 429 7.1e-41 2
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 429 7.5e-41 2
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 431 9.7e-41 3
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 383 8.7e-39 2
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 474 1.5e-38 3
TAIR|locus:2018561 - symbol:AT1G65810 species:3702 "Arabi... 398 2.1e-38 2
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 443 2.4e-38 1
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 365 2.3e-37 4
TAIR|locus:2152627 - symbol:AT5G37030 species:3702 "Arabi... 402 4.8e-37 2
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 381 7.1e-37 2
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 367 1.2e-36 4
UNIPROTKB|Q9P2E3 - symbol:ZNFX1 "NFX1-type zinc finger-co... 364 1.8e-36 2
RGD|1304735 - symbol:Mov10l1 "Mov10l1, Moloney leukemia v... 251 2.0e-36 3
UNIPROTKB|F1S0U6 - symbol:SETX "Uncharacterized protein" ... 391 3.7e-36 3
TAIR|locus:2018536 - symbol:AT1G65780 species:3702 "Arabi... 380 4.4e-36 2
UNIPROTKB|Q4S102 - symbol:GSTENG00025786001 "Chromosome 5... 374 7.1e-36 2
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 256 9.1e-36 3
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 381 1.2e-35 2
MGI|MGI:2138982 - symbol:Znfx1 "zinc finger, NFX1-type co... 360 1.3e-35 2
UNIPROTKB|F1PHA4 - symbol:SETX "Uncharacterized protein" ... 384 1.4e-35 3
MGI|MGI:2443480 - symbol:Setx "senataxin" species:10090 "... 377 3.7e-35 3
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 255 4.6e-35 3
UNIPROTKB|E1BAS6 - symbol:SETX "Uncharacterized protein" ... 368 8.7e-35 3
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 356 1.2e-34 3
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 398 1.6e-34 3
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 407 2.5e-34 1
MGI|MGI:1891384 - symbol:Mov10l1 "Moloney leukemia virus ... 251 2.5e-34 3
UNIPROTKB|Q9BXT6 - symbol:MOV10L1 "Putative helicase Mov1... 252 3.5e-34 3
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 375 3.9e-34 4
POMBASE|SPCC1739.03 - symbol:hrr1 "Helicase Required for ... 321 5.1e-34 2
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 403 6.6e-34 1
UNIPROTKB|G3X7G5 - symbol:MOV10L1 "Uncharacterized protei... 253 1.0e-33 4
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 401 1.2e-33 1
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 348 2.1e-33 3
UNIPROTKB|F1PYQ4 - symbol:DNA2 "Uncharacterized protein" ... 355 2.4e-33 2
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 397 3.2e-33 1
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 397 3.3e-33 1
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 392 1.1e-32 1
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 296 1.5e-32 2
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 296 1.5e-32 2
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 388 1.9e-32 1
FB|FBgn0035842 - symbol:CG7504 species:7227 "Drosophila m... 350 7.0e-32 4
ZFIN|ZDB-GENE-091230-8 - symbol:mov10a "Moloney leukemia ... 281 1.2e-31 2
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 339 1.6e-31 2
UNIPROTKB|Q5ZKG3 - symbol:DNA2 "DNA replication ATP-depen... 217 1.7e-31 4
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 393 1.7e-31 2
UNIPROTKB|G4MK85 - symbol:MGG_02491 "DNA replication ATP-... 196 6.2e-31 4
ZFIN|ZDB-GENE-061013-333 - symbol:zgc:154086 "zgc:154086"... 294 2.1e-30 2
UNIPROTKB|P51530 - symbol:DNA2 "DNA replication ATP-depen... 325 4.6e-30 2
UNIPROTKB|J3KPX5 - symbol:DNA2 "DNA replication ATP-depen... 325 5.9e-30 2
UNIPROTKB|F1NNW1 - symbol:MOV10 "Putative helicase MOV-10... 213 2.9e-29 2
WARNING: Descriptions of 73 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 2550 (902.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 491/632 (77%), Positives = 550/632 (87%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
DGYQY+ FGPLV+LEA+YD++LKES TQEN+ VRWDVGLNKK+IAYF+LAKTD DM+LM
Sbjct: 275 DGYQYEKTFGPLVRLEAEYDQKLKESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLM 334
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
GDEL+L Y + WS +GHVIK+PDNFGD+VGLELKSS AP + T+ F+VDFIWK
Sbjct: 335 HGDELRLHYVGELYNPWSEIGHVIKVPDNFGDDVGLELKSSTNAPVKCTSNFTVDFIWKC 394
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGH----NVDEVLFRCHLPKHFSAPNLPDLNR 507
TSFDRM AL KFA+D SVS +IY RLLGH + DEVLFR PK FSAP+LPDLNR
Sbjct: 395 TSFDRMTRALCKFAIDRNSVSNFIYSRLLGHGRADSNDEVLFRGPQPKLFSAPHLPDLNR 454
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQVYAVKHA+QRPLSLIQGPPGTGKTVTSATIVYQLVK G VLVCAPSN AVDQLTEK
Sbjct: 455 SQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEK 514
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEK 627
IHRT LKVVRVCAKSREAIDSPVSFLALHNQIRNME NS SSADEK
Sbjct: 515 IHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEK 574
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
RYR LK+ AE LL+ ADVICCTCVGAGD RL ++KF SILIDESMQ+TEPECMVPV+LG
Sbjct: 575 RYRNLKRAAENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLG 634
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS+FPS
Sbjct: 635 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPS 694
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
NFFYEGSLQNGVCA++R+L K+DFPWP P++PM F VTQGQEEIAGSGTS++NRTEA+NV
Sbjct: 695 NFFYEGSLQNGVCAEDRRL-KLDFPWPQPERPMFFLVTQGQEEIAGSGTSFLNRTEAANV 753
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
EKITTRF++ G+KPEQIG+ITPYEGQRA+LVQ+MQYQGSL +++YQEIE+ASVDAFQGRE
Sbjct: 754 EKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGRE 813
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD+IIMSCVRSN+ QGIGFLNDPRRLNVALTRAK+GII++GNPKVL+KQ LWN+LLNFYK
Sbjct: 814 KDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYK 873
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
++KVLVEG LNNLKESLI F KPK+ N+
Sbjct: 874 DRKVLVEGSLNNLKESLIHFQKPKKLVNSMNI 905
Score = 1167 (415.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 219/334 (65%), Positives = 257/334 (76%)
Query: 1 MSVDAYGPSSQXXXXXXXXXXXXIGGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVN 60
MSVD Y PSS G DTQ +++D+ DFT+PS SQ+Q +Q D Q+++
Sbjct: 1 MSVDTYAPSSALSFLDMDDNELLPGADTQPTQYDYRDFTMPSTSQSQ-TQND---QLEIA 56
Query: 61 GKQNLDNSNLNLVSXXXXXXXXXXXXXXXX--XXXXXXLPPHACKYCGIHDPAYVIMCNI 118
+ + +S+ L S LPPHACKYCGIHDPA V+MCN
Sbjct: 57 QRCSAGDSHPRLASITNDLADLQFEEEDDEPGSSYVKELPPHACKYCGIHDPATVVMCNN 116
Query: 119 CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPA 178
C+KWFCNGRG TSGSHIINHLVRAKH+EVTLH +GPLGET+LECY+CGVRN+FVLGFIPA
Sbjct: 117 CRKWFCNGRGSTSGSHIINHLVRAKHREVTLHGEGPLGETILECYSCGVRNVFVLGFIPA 176
Query: 179 KADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTS 238
KADSVVVLLCR PCAAQNSLKDMNWDQEQWKPLIADR FL+WLVK P+EQ Q R RQ+++
Sbjct: 177 KADSVVVLLCRQPCAAQNSLKDMNWDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQISA 236
Query: 239 AQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKR 298
AQI KLEE+WK+N EATFQDLEKPG+D +P VLLRYEDGYQY+ FGPLV+LEA+YD++
Sbjct: 237 AQINKLEELWKENIEATFQDLEKPGIDSEPAHVLLRYEDGYQYEKTFGPLVRLEAEYDQK 296
Query: 299 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
LKES TQEN+ VRWDVGLNKK+IAYF+LAKTD D
Sbjct: 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTDSD 330
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 2541 (899.5 bits), Expect = 0., Sum P(3) = 0.
Identities = 474/621 (76%), Positives = 536/621 (86%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD DMRLM
Sbjct: 297 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLM 356
Query: 392 QGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
QGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T F VDF+WKS
Sbjct: 357 QGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKS 416
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
TSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVY
Sbjct: 417 TSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVY 476
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRT 571
AVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+T
Sbjct: 477 AVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQT 536
Query: 572 GLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRYRM 631
GLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ SSADEKRYR
Sbjct: 537 GLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRA 596
Query: 632 LKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQL 691
LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQL
Sbjct: 597 LKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQL 656
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
ILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN FY
Sbjct: 657 ILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFY 716
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
EGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKIT
Sbjct: 717 EGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKIT 776
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLI 871
T+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD I
Sbjct: 777 TKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFI 836
Query: 872 IMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKV 931
I+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQKV
Sbjct: 837 ILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKV 896
Query: 932 LVEGPLNNLKESLILFSKPKQ 952
LVEGPLNNL+ESL+ FSKP++
Sbjct: 897 LVEGPLNNLRESLMQFSKPRK 917
Score = 1054 (376.1 bits), Expect = 0., Sum P(3) = 0.
Identities = 187/236 (79%), Positives = 209/236 (88%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLG 156
LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLG
Sbjct: 117 LPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLG 176
Query: 157 ETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS 216
ETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR
Sbjct: 177 ETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRC 236
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P VLLRYE
Sbjct: 237 FLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 296
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD D
Sbjct: 297 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSD 352
Score = 141 (54.7 bits), Expect = 0., Sum P(3) = 0.
Identities = 28/46 (60%), Positives = 32/46 (69%)
Query: 1 MSVDAYGPSSQXXXXXXXXXXXXIGGDTQGSEFDFTDFTLPSQSQT 46
MSV+AY PSSQ +G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYVPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQT 46
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 2536 (897.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 475/622 (76%), Positives = 537/622 (86%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRL 390
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD GDMRL
Sbjct: 277 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGDMRL 336
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWK 450
MQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SSAGAP E F VDF+WK
Sbjct: 337 MQGDEICLRYKGDMAPLWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEVPHNFQVDFVWK 396
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
STSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQV
Sbjct: 397 STSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQV 456
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
YAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIAVDQLTEKIH+
Sbjct: 457 YAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQ 516
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRYR 630
TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+ SS+DEKRYR
Sbjct: 517 TGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSSDEKRYR 576
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQ 690
LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPECMVPV+LGAKQ
Sbjct: 577 ALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQ 636
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
LILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP LS FPSN F
Sbjct: 637 LILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIF 696
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
YEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKI
Sbjct: 697 YEGSLQNGVTAADRLKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKI 756
Query: 811 TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDL 870
TTR ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD
Sbjct: 757 TTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDF 816
Query: 871 IIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LLN+YKEQK
Sbjct: 817 IILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQK 876
Query: 931 VLVEGPLNNLKESLILFSKPKQ 952
VLVEGPLNNL+ESL+ FSKP++
Sbjct: 877 VLVEGPLNNLRESLMQFSKPRK 898
Score = 1192 (424.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 228/337 (67%), Positives = 256/337 (75%)
Query: 1 MSVDAYGPSSQXXXXXXXXXXXXIGGDTQGSEFDFTDFTLPSQSQTQA---SQLDSVNQI 57
MSV+AYGPSSQ +G DTQGSEF+FTDFTLPSQ+QTQ SQLD+
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTQGQTQSQLDN---- 56
Query: 58 QVNGKQN-LDNSNLNLVSXXXXXXXXXXXXXXXXXXXXXXLPPHACKYCGIHDPAYVIMC 116
QVNG L N + LP HAC YCGIHDPA V+ C
Sbjct: 57 QVNGPDGVLPNGEDAVGKTSQLLAELNFEEDEEDTYYTKVLPVHACSYCGIHDPACVVYC 116
Query: 117 NICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFI 176
N KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY CG RN+F+LGFI
Sbjct: 117 NTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFI 176
Query: 177 PAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKVPTEQEQQRGRQV 236
PAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+P+EQEQ R RQ+
Sbjct: 177 PAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQI 236
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
T+ QI KLEE+WK+N AT +DLEKPGVDE+P VLLRYED YQYQNIFGPLVKLEADYD
Sbjct: 237 TAQQINKLEELWKENPTATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYD 296
Query: 297 KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GD 332
K+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD GD
Sbjct: 297 KKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGD 333
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 2512 (889.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 474/632 (75%), Positives = 536/632 (84%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG----- 386
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 296 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDL 355
Query: 387 ------DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T
Sbjct: 356 VIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVT 415
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A
Sbjct: 416 HNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQ 475
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIA
Sbjct: 476 GLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIA 535
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXX 620
VDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+
Sbjct: 536 VDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGE 595
Query: 621 XSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
SSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPEC
Sbjct: 596 LSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPEC 655
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
MVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP
Sbjct: 656 MVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHP 715
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+N
Sbjct: 716 ALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLN 775
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASV
Sbjct: 776 RTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASV 835
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN
Sbjct: 836 DAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWN 895
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 896 HLLNYYKEQKVLVEGPLNNLRESLMQFSKPRK 927
Score = 1048 (374.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 186/234 (79%), Positives = 208/234 (88%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLG 156
LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLG
Sbjct: 116 LPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLG 175
Query: 157 ETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS 216
ETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR
Sbjct: 176 ETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRC 235
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P VLLRYE
Sbjct: 236 FLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 295
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 296 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTD 349
Score = 150 (57.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 1 MSVDAYGPSSQXXXXXXXXXXXXIGGDTQGSEFDFTDFTLPSQSQT 46
MSV+AYGPSSQ +G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQT 46
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 2512 (889.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 474/632 (75%), Positives = 536/632 (84%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG----- 386
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 299 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDL 358
Query: 387 ------DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T
Sbjct: 359 VIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVT 418
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A
Sbjct: 419 HNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQ 478
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIA
Sbjct: 479 GLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIA 538
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXX 620
VDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+
Sbjct: 539 VDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGE 598
Query: 621 XSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
SSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPEC
Sbjct: 599 LSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPEC 658
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
MVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP
Sbjct: 659 MVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHP 718
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+N
Sbjct: 719 ALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLN 778
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASV
Sbjct: 779 RTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASV 838
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN
Sbjct: 839 DAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWN 898
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 899 HLLNYYKEQKVLVEGPLNNLRESLMQFSKPRK 930
Score = 1048 (374.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 186/234 (79%), Positives = 208/234 (88%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLG 156
LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLG
Sbjct: 119 LPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLG 178
Query: 157 ETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS 216
ETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR
Sbjct: 179 ETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRC 238
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P VLLRYE
Sbjct: 239 FLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 298
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 299 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTD 352
Score = 150 (57.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 1 MSVDAYGPSSQXXXXXXXXXXXXIGGDTQGSEFDFTDFTLPSQSQT 46
MSV+AYGPSSQ +G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQT 46
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 2512 (889.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 474/632 (75%), Positives = 536/632 (84%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG----- 386
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 298 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDL 357
Query: 387 ------DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T
Sbjct: 358 VIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVT 417
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A
Sbjct: 418 HNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQ 477
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIA
Sbjct: 478 GLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIA 537
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXX 620
VDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+
Sbjct: 538 VDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGE 597
Query: 621 XSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
SSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPEC
Sbjct: 598 LSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPEC 657
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
MVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP
Sbjct: 658 MVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHP 717
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+N
Sbjct: 718 ALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLN 777
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASV
Sbjct: 778 RTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASV 837
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN
Sbjct: 838 DAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWN 897
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 898 HLLNYYKEQKVLVEGPLNNLRESLMQFSKPRK 929
Score = 1047 (373.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 186/234 (79%), Positives = 208/234 (88%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLG 156
LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLG
Sbjct: 118 LPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLG 177
Query: 157 ETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS 216
ETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR
Sbjct: 178 ETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRC 237
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P VLLRYE
Sbjct: 238 FLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 297
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 298 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTD 351
Score = 150 (57.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 29/46 (63%), Positives = 33/46 (71%)
Query: 1 MSVDAYGPSSQXXXXXXXXXXXXIGGDTQGSEFDFTDFTLPSQSQT 46
MSV+AYGPSSQ +G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQT 46
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 2512 (889.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 474/632 (75%), Positives = 536/632 (84%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG----- 386
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 297 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNVFC 356
Query: 387 ------DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T
Sbjct: 357 IVGWLLDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVT 416
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A
Sbjct: 417 HNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQ 476
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIA
Sbjct: 477 GLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIA 536
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXX 620
VDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+
Sbjct: 537 VDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGE 596
Query: 621 XSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
SSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPEC
Sbjct: 597 LSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPEC 656
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
MVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP
Sbjct: 657 MVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHP 716
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+N
Sbjct: 717 ALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLN 776
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASV
Sbjct: 777 RTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASV 836
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN
Sbjct: 837 DAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWN 896
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+LLN+YKEQKVLVEGPLNNL+ESL+ FSKP++
Sbjct: 897 HLLNYYKEQKVLVEGPLNNLRESLMQFSKPRK 928
Score = 1048 (374.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 186/234 (79%), Positives = 208/234 (88%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLG 156
LP HAC YCGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLG
Sbjct: 117 LPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLG 176
Query: 157 ETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS 216
ETVLECY CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR
Sbjct: 177 ETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRC 236
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYE 276
FLSWLVK+P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P VLLRYE
Sbjct: 237 FLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYE 296
Query: 277 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IAYF+L KTD
Sbjct: 297 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTD 350
Score = 141 (54.7 bits), Expect = 0., Sum P(3) = 0.
Identities = 28/46 (60%), Positives = 32/46 (69%)
Query: 1 MSVDAYGPSSQXXXXXXXXXXXXIGGDTQGSEFDFTDFTLPSQSQT 46
MSV+AY PSSQ +G DTQGSEF+FTDFTLPSQ+QT
Sbjct: 1 MSVEAYVPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQT 46
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 2498 (884.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 471/632 (74%), Positives = 535/632 (84%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG----- 386
D YQYQNIFGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD
Sbjct: 293 DAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDL 352
Query: 387 ------DMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEAT 440
DMRLMQGDE+ LRY D + W G+GHVIK+PDN+GDE+ +EL+SS GAP E T
Sbjct: 353 VIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVT 412
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAP 500
F VDF+WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A
Sbjct: 413 HNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQ 472
Query: 501 NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LPDLN SQVYAVK +QRPLSLIQGPPGTGKTVTSATIVY L +Q PVLVCAPSNIA
Sbjct: 473 GLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIA 532
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXX 620
VDQLTEKIH+TGLKVVR+CAKSREAIDSPVSFLALHNQIRNM+
Sbjct: 533 VDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGE 592
Query: 621 XSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
SSADEKRYR LK+ AE+ LL NADVICCTCVGAGDPRL K++F SILIDES QATEPEC
Sbjct: 593 LSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPEC 652
Query: 681 MVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHP 740
MVPV+LGAKQLILVGDHCQLGPVVMCKKAA+AGLSQSLFERLVVLGIRP RL+VQYRMHP
Sbjct: 653 MVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHP 712
Query: 741 ELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVN 800
LS FPSN FYEGSLQNGV A +R DF WP PDKPM FYVTQGQEEIA SGTSY+N
Sbjct: 713 ALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLN 772
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
RTEA+NVEKITT+ ++ G KP+QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASV
Sbjct: 773 RTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASV 832
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
DAFQGREKD II+SCVR+N+HQGIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN
Sbjct: 833 DAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWN 892
Query: 921 NLLNFYKEQKVLVEGPLNNLKESLILFSKPKQ 952
+LL++YKEQK LVEGPLNNL+ESL+ FSKP++
Sbjct: 893 HLLSYYKEQKALVEGPLNNLRESLMQFSKPRK 924
Score = 1143 (407.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 220/346 (63%), Positives = 253/346 (73%)
Query: 1 MSVDAYGPSSQXXXXXXXXXXXXIGGDTQGSEFDFTDFTLPSQSQTQ------------A 48
MSV+AYGPSSQ +G DTQGSEF+FTDFTLPSQ+QT A
Sbjct: 1 MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGAGGPGGA 60
Query: 49 SQLDSVNQI--QVNGKQNLDNSNLN--LVSXXXXXXXXXXXXXXXXXXXXXXLPPHACKY 104
+ Q+ QV + L N ++ + LP HAC Y
Sbjct: 61 GAGGAAGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPVHACSY 120
Query: 105 CGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYT 164
CGIHDPA V+ CN KKWFCNGRG+TSGSHI+NHLVRAK KEVTLHKDGPLGETVLECY
Sbjct: 121 CGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYN 180
Query: 165 CGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWLVKV 224
CG RN+F+LGFIPAKADSVVVLLCR PCA+Q+SLKD+NWD QW+PLI DR FLSWLVK+
Sbjct: 181 CGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKI 240
Query: 225 PTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNI 284
P+EQEQ R RQ+T+ QI KLEE+WK+N AT +DLEKPGVDE+P VLLRYED YQYQNI
Sbjct: 241 PSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNI 300
Query: 285 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
FGPLVKLEADYDK+LKESQTQ+N+TVRWD+GLNKK IA+F+L KTD
Sbjct: 301 FGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAFFTLPKTD 346
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 2182 (773.2 bits), Expect = 0., Sum P(3) = 0.
Identities = 405/631 (64%), Positives = 501/631 (79%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
D YQYQN+F PL+KLEADYDK +KESQ++EN+TVRWD+GLNKK +AYF K + ++RL+
Sbjct: 317 DAYQYQNVFAPLIKLEADYDKMMKESQSKENLTVRWDIGLNKKRVAYFVFPKEENELRLV 376
Query: 392 QGDELKLRYSYDA-SKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWK 450
GDEL+LRYS DA +W +GHVIK+ +EV LEL+++ G P + GFSVDF+WK
Sbjct: 377 PGDELRLRYSGDAVHPSWQSVGHVIKLTAQ--EEVALELRANQGVPIDVNHGFSVDFVWK 434
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
STSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+ + R LP+ F P LP+LN SQV
Sbjct: 435 STSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQV 494
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHR 570
AVK +Q+P+SLIQGPPGTGKTVTSA IVY + KQ VLVCAPSN+AVDQL EKI
Sbjct: 495 NAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISA 554
Query: 571 TGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMN--SXXXXXXXXXXXXXXXSSADEKR 628
TGLKVVR+CAKSREA+ SPV +L LH Q+R+++ + S SS+DEK+
Sbjct: 555 TGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKK 614
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
Y+ LK+ E+ + +ADVICCTCVGA D RL +F +LIDES QATEPEC++P++LG
Sbjct: 615 YKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGV 674
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
KQ++LVGDHCQLGPV+MCKKAARAGL+QSLFERLV LGI+P RL+VQYRMHP LS+FPSN
Sbjct: 675 KQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPSN 734
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FYEG+LQNGV ER+ + IDFPWPVP++PM FYV GQEEI+ SGTSY+NRTEA+NVE
Sbjct: 735 SFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEISASGTSYLNRTEAANVE 794
Query: 809 KITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
K+ T F++ G+ P QIGVITPYEGQRA++V +M GSL ++Y+EIEVASVD+FQGREK
Sbjct: 795 KLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREK 854
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
D II+SCVRSN+HQGIGFLNDPRRLNVALTRA+YGI+++GNPKVLSKQPLWN LL YKE
Sbjct: 855 DYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 914
Query: 929 QKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
+ LVEGPLNNLK+S++ F KP++ + +
Sbjct: 915 HECLVEGPLNNLKQSMVQFQKPRKIYNDRRL 945
Score = 926 (331.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 161/235 (68%), Positives = 193/235 (82%)
Query: 100 HACKYCGIHDPAYVIMCNI--CKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGE 157
HACKYCGI +PA V+ CN+ C+KWFCN RG+TSGSHI+NHLVRAKHKEV LH+D PLGE
Sbjct: 138 HACKYCGISNPACVVRCNVASCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHRDSPLGE 197
Query: 158 TVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSF 217
T+LECY CG RN+F+LGFI AK DSVVVLLCR PC N+LKDMNWD QW PLI DR F
Sbjct: 198 TILECYNCGCRNVFLLGFISAKTDSVVVLLCRDPCLNVNALKDMNWDLSQWCPLIDDRCF 257
Query: 218 LSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYED 277
L WLVKVP+EQEQ R RQ+++ QI K+EE+WK N +AT +DLEKPGVD++P V +YED
Sbjct: 258 LPWLVKVPSEQEQLRARQISAQQINKIEELWKTNPDATLEDLEKPGVDDEPQPVQPKYED 317
Query: 278 GYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGD 332
YQYQN+F PL+KLEADYDK +KESQ++EN+TVRWD+GLNKK +AYF K + +
Sbjct: 318 AYQYQNVFAPLIKLEADYDKMMKESQSKENLTVRWDIGLNKKRVAYFVFPKEENE 372
Score = 51 (23.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 27 DTQG-SEFDFTDFTLPSQSQTQASQLDSVNQIQVNGK 62
+TQG SEFD+ DF P+ T + + S+ + G+
Sbjct: 28 NTQGDSEFDYQDFGSPTAWPTPSDSI-SIADVADRGE 63
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 2134 (756.3 bits), Expect = 2.1e-310, Sum P(2) = 2.1e-310
Identities = 398/628 (63%), Positives = 495/628 (78%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRL 390
D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K + GD++L
Sbjct: 247 DAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVKL 306
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSA---GAPTEATTGFSVDF 447
GDE++L+Y+ + W G+G+VIKIP+N DEV +EL++ PTE T F+ D+
Sbjct: 307 AVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTADY 366
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS P LP+LN
Sbjct: 367 VWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELNG 426
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQ+ AVK +QRPLSLIQGPPGTGKTVTSATI+Y L K G VLVCAPSN+AVDQL E+
Sbjct: 427 SQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCER 486
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEK 627
IHRTGLK VRV AKSRE ++SPV FL+LH Q+R + N SS DEK
Sbjct: 487 IHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELIKLNQLKSELGELSSQDEK 546
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
R + L + AE+ +L+NADVICCTCVGAGDPRL K+KF ++LIDES Q+ EPECM+P++LG
Sbjct: 547 RLKQLTRAAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVLG 606
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV+LG P RL VQYRMHP LS+FPS
Sbjct: 607 CKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFPS 666
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FYEGSLQNG+ + +R ++DFPWP+ D PM+F+ G EEI+ SGTSY+NRTEA+NV
Sbjct: 667 NMFYEGSLQNGITSFDRLRREVDFPWPILDSPMMFWSNLGNEEISASGTSYLNRTEAANV 726
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
EKI TRF + G++P+ IG+ITPYEGQR+++V MQ G+ + Y+EIEVASVDAFQGRE
Sbjct: 727 EKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGRE 786
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II+SCVRSNDHQGIGFL+DPRRLNVALTRAKYG++++GNPKVLSK PLWN LL +K
Sbjct: 787 KDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFK 846
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQYFK 955
E+ LVEGPL+NL+ESLI FS+PKQ ++
Sbjct: 847 ERHTLVEGPLSNLQESLIQFSRPKQAYR 874
Score = 868 (310.6 bits), Expect = 2.1e-310, Sum P(2) = 2.1e-310
Identities = 153/238 (64%), Positives = 191/238 (80%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLG 156
L PHAC YCGIH+P+ V+ C C KWFC+ RG+TS SHI+NHLVRA+HKEV LH + LG
Sbjct: 66 LAPHACAYCGIHNPSSVVKCLACSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPESSLG 125
Query: 157 ETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS 216
+TVLECY CG +N+F+LGFIPAK+D+VVVLLCR PCAA S KDMNWD +W+PLI DRS
Sbjct: 126 DTVLECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIEDRS 185
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQVLLRY 275
FL+WLV P++QEQ R R ++ IAKLEE+WK+N++AT DLEK VD++P VLLRY
Sbjct: 186 FLTWLVAAPSDQEQLRARHLSPQMIAKLEEMWKENSQATIADLEKATAVDDEPAPVLLRY 245
Query: 276 EDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GD 332
+D +QYQNIFGPLVK+EADYD++LKESQ+Q+ + VRWD+GLN K +A F L K + GD
Sbjct: 246 DDAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGD 303
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 2094 (742.2 bits), Expect = 7.4e-306, Sum P(2) = 7.4e-306
Identities = 393/634 (61%), Positives = 490/634 (77%)
Query: 326 LAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 385
L K D D Y YQNIFGPLVK+E+DYDK+LKE+Q+++ + VRWD GLN K +A F L K +
Sbjct: 270 LLKYD-DPYHYQNIFGPLVKMESDYDKKLKEAQSEDGLVVRWDYGLNNKHLASFILPKIE 328
Query: 386 -GDMRLMQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAG---APTEATT 441
GD++L GDE++L+Y + W G+G+V+KIP+N DEV LEL+ S PTE T
Sbjct: 329 SGDVKLAVGDEMRLKYKGELRPQWEGVGYVVKIPNNQSDEVTLELRKSGNDKSVPTECTH 388
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPN 501
FS D++WK+TS+DRMQLA+R FAVD+ SVS YI+H+LLGH V R +PK F+AP
Sbjct: 389 NFSADYVWKATSYDRMQLAMRNFAVDEMSVSGYIFHKLLGHEVAVAPMRTTMPKKFTAPG 448
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
LPDLN SQ+ A+K + PLSLIQGPPGTGKTVTSATI+Y L K GS VLVCAPSN+AV
Sbjct: 449 LPDLNGSQISAIKAVLSTPLSLIQGPPGTGKTVTSATIIYHLAKMNGSQVLVCAPSNVAV 508
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXX 621
DQL E++HRTGLKVVR+ AKSRE ++S VSFLALH Q+R + N
Sbjct: 509 DQLCERVHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDTNPELAKLQQLKSELGEL 568
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
SS DEK+++ L K AE+ +L NADV+CCTCVGAGDPRL K+KF ++LIDES Q+ EPECM
Sbjct: 569 SSQDEKKFKQLTKAAEREILSNADVVCCTCVGAGDPRLAKLKFRNVLIDESTQSAEPECM 628
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPE 741
+P++LG KQ++LVGDH QLGPV+M KKAA+AGL+QSLFERLV LG+ P RL VQYRMHP
Sbjct: 629 IPLVLGCKQVVLVGDHKQLGPVIMNKKAAKAGLNQSLFERLVKLGLTPIRLNVQYRMHPC 688
Query: 742 LSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
LS+FPSN FYEGSLQNGV +R +DFPWPV D PM+F+ G EEI+ SGTSY+NR
Sbjct: 689 LSEFPSNMFYEGSLQNGVTIQQRLRRDVDFPWPVADMPMMFWSNLGNEEISASGTSYLNR 748
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
TEASNVEK+ TRF + G+KP IGV+TPYEGQR+++V MQ G+ + Y+E+EVASVD
Sbjct: 749 TEASNVEKLVTRFFKAGVKPGDIGVVTPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVD 808
Query: 862 AFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
AFQGREKD I++SCVRSN+ QGIGFL+DPRRLNVALTRAKYG+++IGNPKVLSK LW++
Sbjct: 809 AFQGREKDFIVLSCVRSNESQGIGFLSDPRRLNVALTRAKYGVVIIGNPKVLSKHELWHH 868
Query: 922 LLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFK 955
LL ++++K LV+GPL NL+ SL+ FSKPK F+
Sbjct: 869 LLIHFRDRKCLVDGPLTNLQASLLQFSKPKTPFR 902
Score = 865 (309.6 bits), Expect = 7.4e-306, Sum P(2) = 7.4e-306
Identities = 154/238 (64%), Positives = 189/238 (79%)
Query: 97 LPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLG 156
LP HAC YCGIH PA V+ C CKKWFCN RG+TS SHIINHLVRA+HKEV LH + LG
Sbjct: 94 LPEHACAYCGIHSPACVVKCLGCKKWFCNSRGNTSSSHIINHLVRARHKEVQLHPESTLG 153
Query: 157 ETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS 216
+T+LECY CGVRN+F+LGFIPAK+D+VVVLLCR PCAA S KDM+WD +W PL+ +R+
Sbjct: 154 DTILECYNCGVRNVFLLGFIPAKSDTVVVLLCRQPCAANPSSKDMSWDISRWSPLLDERN 213
Query: 217 FLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLRY 275
FLSWLV VPT+ EQ R R +T IAKLEE+WK++A AT DLEK +D++PH VLL+Y
Sbjct: 214 FLSWLVAVPTDAEQLRARHLTPPMIAKLEELWKEDANATVDDLEKNEQIDDEPHPVLLKY 273
Query: 276 EDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GD 332
+D Y YQNIFGPLVK+E+DYDK+LKE+Q+++ + VRWD GLN K +A F L K + GD
Sbjct: 274 DDPYHYQNIFGPLVKMESDYDKKLKEAQSEDGLVVRWDYGLNNKHLASFILPKIESGD 331
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 1949 (691.1 bits), Expect = 1.5e-274, Sum P(2) = 1.5e-274
Identities = 379/635 (59%), Positives = 472/635 (74%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRL 390
D + YQ + PL++ EADYDKRLKESQTQ++V VRWD +NK+ A+F L K + G++RL
Sbjct: 219 DAHAYQAVLSPLIQAEADYDKRLKESQTQKDVVVRWDQAINKRYTAWFLLPKLESGEIRL 278
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWK 450
GDE+KL Y + WS G+VIKIP+N DEVGLELK S P E T FSVD++WK
Sbjct: 279 AIGDEMKLTYEGELRAPWSSTGYVIKIPNNVSDEVGLELKRSDKVPIECTHNFSVDYVWK 338
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
STSFDRMQ ALR FA D +S+++YH+LLGH++ + LP S PNLP LN SQ
Sbjct: 339 STSFDRMQTALRLFATDGSRLSSFLYHKLLGHDIPPSFLKPKLPSDLSVPNLPKLNASQS 398
Query: 511 YAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV------KQTGSPVLVCAPSNIAVDQL 564
AV+ + +PLSLIQGPPGTGKTVTSA++VY L +++ SPVLVCAPSN+AVDQL
Sbjct: 399 EAVRAVLSKPLSLIQGPPGTGKTVTSASVVYHLATMQSRKRKSHSPVLVCAPSNVAVDQL 458
Query: 565 TEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSA 624
EKIHRTGL+VVRV AKSRE I+S VSFL+LH QI+N + N S
Sbjct: 459 AEKIHRTGLRVVRVAAKSREDIESSVSFLSLHEQIKNYKFNPELQRLLKLRSENNELSIQ 518
Query: 625 DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPV 684
DEK+ R+L AEK LL A VICCTCVGAGD R+ K KF S+LIDE+ QA+EPECM+P+
Sbjct: 519 DEKKLRILVAAAEKELLRAAHVICCTCVGAGDRRISKYKFRSVLIDEATQASEPECMIPL 578
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
+LGAKQ++LVGDH QLGPVVM KK A A LSQSLFERL++LG PFRL VQYRMHP LS+
Sbjct: 579 VLGAKQVVLVGDHQQLGPVVMNKKVALASLSQSLFERLIILGNSPFRLVVQYRMHPCLSE 638
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEA 804
FPSN FYEG+LQNGV ER +DFPW PD P++FY GQEE++ SGTS++NRTEA
Sbjct: 639 FPSNTFYEGTLQNGVTTSERIARHVDFPWIQPDSPLMFYANFGQEELSASGTSFLNRTEA 698
Query: 805 SNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
S EKI T F+R + PEQIG++TPY+GQR+++VQ+MQ GS+ +Y+ +EVASVDAFQ
Sbjct: 699 STCEKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAFQ 758
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
GREKD II+SCVRS++HQGIGF+NDPRRLNVALTRAKYG+IV+GNPKVL+K LW + +
Sbjct: 759 GREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTRAKYGVIVLGNPKVLAKHALWYHFVL 818
Query: 925 FYKEQKVLVEGPLNNLKESLILFSKPK--QYFKKN 957
KE+ LVEG LN+L++ + + P+ Q FK++
Sbjct: 819 HCKEKGYLVEGTLNSLQKFSLTLTPPQKPQKFKRD 853
Score = 714 (256.4 bits), Expect = 1.5e-274, Sum P(2) = 1.5e-274
Identities = 131/258 (50%), Positives = 175/258 (67%)
Query: 102 CKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLE 161
C YC I +P ++ C C KWFCN RG + SHII+HLVRA+HK+V LH L +TVLE
Sbjct: 44 CAYCHIKNPNSILKCLHCNKWFCNVRGKSGASHIISHLVRARHKQVALHSHSSLSDTVLE 103
Query: 162 CYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLSWL 221
CY CG RN+F+LGFIPAKA +VVVLLCR PCA + KDMNWD QW+P+I+DR FL WL
Sbjct: 104 CYNCGTRNVFLLGFIPAKAKTVVVLLCRQPCARASIAKDMNWDLTQWQPIISDRQFLPWL 163
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQY 281
+ P+E+EQ+ +TS Q+ +LEE+W+ + A +DL+KP D+ V LRY+D + Y
Sbjct: 164 ITPPSEEEQKLAIPITSQQMVRLEELWRKDPNANLEDLDKPIEDDSLPSVELRYKDAHAY 223
Query: 282 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFG 341
Q + PL++ EADYDKRLKESQTQ++V VRWD +NK+ A+F L K + + + G
Sbjct: 224 QAVLSPLIQAEADYDKRLKESQTQKDVVVRWDQAINKRYTAWFLLPKLESG--EIRLAIG 281
Query: 342 PLVKLEADYDKRLKESQT 359
+KL + + R S T
Sbjct: 282 DEMKLTYEGELRAPWSST 299
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 1785 (633.4 bits), Expect = 4.2e-261, Sum P(2) = 4.2e-261
Identities = 344/633 (54%), Positives = 463/633 (73%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAK-TDGDMRL 390
D + Y +F PLV +EA+YD+R+KES +Q TVRW+ GL + +A+F L + DG M+L
Sbjct: 270 DAHHYSKVFRPLVAIEAEYDRRVKESASQAVGTVRWEQGLRQSVLAFFHLPQFADGVMKL 329
Query: 391 MQGDELKLRYSY--DASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPT-EATTGFSVDF 447
+GDEL+L++S D S+ W+ +G V KIPDN GDEVG+E++ + E+ F+VD
Sbjct: 330 AKGDELRLKHSQTVDGSE-WTKIGSVFKIPDNHGDEVGIEIRGAVDKSVMESRIMFTVDV 388
Query: 448 IWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNR 507
+W +T+F+R AL D +++S Y+Y +LLGH +E++ + LP+ S LP+LN
Sbjct: 389 VWNATTFERQYKALAALLNDSKAISPYLYQKLLGHPAEEMMLKFDLPRRLSVAGLPELNS 448
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
SQ+ AVK + RPLSLIQGPPGTGKTV SATIVY LV++T VLVC+PSNIAVD L EK
Sbjct: 449 SQMQAVKQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEK 508
Query: 568 IHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEK 627
IH+TGLKVVR+CA+SRE ++ V +L L +Q++ M + D+
Sbjct: 509 IHKTGLKVVRLCARSREHSETTVPYLTLQHQLKVMG-GAELQKLIQLKDEAGELEFKDDL 567
Query: 628 RYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG 687
RY LK+ E LL ADVICCTC A D RL KI+ ++LIDES QATEPE +V ++ G
Sbjct: 568 RYMQLKRVKEHELLAAADVICCTCSSAADARLSKIRTRTVLIDESTQATEPEILVSIMRG 627
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
+QL+LVGDHCQLGPVV+CKKAA AGLSQSLFERLV+LGIRPFRL+VQYRMHP LS+FPS
Sbjct: 628 VRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFRLQVQYRMHPVLSEFPS 687
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FY+GSLQNGV ++R ++ +D+ WP P+KP F+ G EE++ SGTS++NRTEA+NV
Sbjct: 688 NVFYDGSLQNGVTENDRHMTGVDWHWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANV 747
Query: 808 EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
EK+ ++ I+ G++P QIGVIT YEGQR+F+V +M QG+L +K+Y+ +E+ASVDAFQGRE
Sbjct: 748 EKLVSKLIKAGVQPHQIGVITSYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGRE 807
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II++CVRSND GIGFL+DPRRLNVA+TRAKYG++++GN KVL++ LW+ L+N YK
Sbjct: 808 KDYIIVTCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVLARHDLWHELINHYK 867
Query: 928 EQKVLVEGPLNNLKESLILFSKPKQYFK-KNNM 959
+++L EGP+N LK + + PK + KNN+
Sbjct: 868 SKEMLYEGPINALKP--LNLALPKATIRTKNNI 898
Score = 751 (269.4 bits), Expect = 4.2e-261, Sum P(2) = 4.2e-261
Identities = 146/334 (43%), Positives = 203/334 (60%)
Query: 26 GDTQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLNLVSXXXXXXXXXXX 85
G+TQ S+F + F++P+QS +QA+ L + G D + +L
Sbjct: 29 GNTQDSQFAYEQFSVPTQS-SQATDL-------LPG--GTDGTTNDLPFHDVEDDESDSE 78
Query: 86 XXXXXXXXXXXLPPHACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHK 145
LP HAC+YCGI DP V C +C+KWFCN TSG HI++H+VR++HK
Sbjct: 79 KSLTEEQHEQKLPEHACRYCGISDPLCVAKCTVCRKWFCNSNDGTSGGHIVHHMVRSQHK 138
Query: 146 EVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQ 205
E HKD P G+T LECY CG +N+F LGFIP K D VVV++CRTPCA+ D NW
Sbjct: 139 EAYTHKDSPCGDTQLECYRCGSKNVFNLGFIPGKKDQVVVIICRTPCASIAFQNDDNWSP 198
Query: 206 EQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVD 265
E WK +IA++ LSW+V VP+E++ R R++T+ Q ++EE+W+D+ EAT DL KPG+D
Sbjct: 199 EDWKSVIAEKQLLSWIVNVPSEEQVARARKITATQAVRMEELWRDHPEATVDDLNKPGLD 258
Query: 266 EDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFS 325
+P V LRY D + Y +F PLV +EA+YD+R+KES +Q TVRW+ GL + +A+F
Sbjct: 259 REPDHVQLRYVDAHHYSKVFRPLVAIEAEYDRRVKESASQAVGTVRWEQGLRQSVLAFFH 318
Query: 326 LAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQT 359
L + DG ++KL + RLK SQT
Sbjct: 319 LPQF-ADG---------VMKLAKGDELRLKHSQT 342
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 1789 (634.8 bits), Expect = 2.2e-255, Sum P(2) = 2.2e-255
Identities = 344/622 (55%), Positives = 451/622 (72%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG-DMRL 390
D Y+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L+ + ++++
Sbjct: 234 DAYEYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTLSTFESNELKV 293
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIW 449
GDE+ L YS W G G+++++P++F D LELK S PT TTGF+ +FIW
Sbjct: 294 AIGDEMILWYSGMQHPDWEGRGYIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIW 353
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V ++ F LPK FS PN LN SQ
Sbjct: 354 KGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNFAQLNSSQ 413
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
AV H +QRPLSLIQGPPGTGKTVTSATIVY L K +LVCAPSN+AVD L K+
Sbjct: 414 SNAVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLR 473
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRY 629
GLKVVR+ AKSRE ++S VS LALHN + S++D KR+
Sbjct: 474 DLGLKVVRLTAKSREDVESSVSNLALHNLV-GRGAKGELKNLLKLKDEVGELSASDTKRF 532
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
L + E +L+ ADV+CCTCVGAGD RL KF ++LIDES QA+EPEC++P++ GAK
Sbjct: 533 VKLVRKTEAEILNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAK 591
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q+ILVGDH QLGPV++ +KAA AGL QSLFERL+ LG P RLEVQYRM+P LS+FPSN
Sbjct: 592 QVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPSNM 651
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV ++R + FPWP+ PM+F+ G+EEI+ +GTS++NR EA N E+
Sbjct: 652 FYEGSLQNGVTIEQRTVPNSKFPWPIRGIPMMFWANYGREEISANGTSFLNRIEAMNCER 711
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKD 869
I T+ R G+KPEQIGVITPYEGQRA+++Q+MQ GSL +Y ++EVASVDAFQGREKD
Sbjct: 712 IITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKD 771
Query: 870 LIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
II+SCVR+N+ Q IGFL DPRRLNV LTRAKYG++++GNP+ L++ LWN+LL ++E+
Sbjct: 772 YIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIHFREK 831
Query: 930 KVLVEGPLNNLKESLILFSKPK 951
LVEG L+NL+ + +P+
Sbjct: 832 GCLVEGTLDNLQLCTVQLVRPQ 853
Score = 693 (249.0 bits), Expect = 2.2e-255, Sum P(2) = 2.2e-255
Identities = 121/228 (53%), Positives = 164/228 (71%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
++C YCGI VI CN CKKWFCN + TS SHI+NHLV + H V+LH D LG+TV
Sbjct: 60 NSCAYCGIDSAKCVIKCNSCKKWFCNTKNGTSSSHIVNHLVLSHHNVVSLHPDSDLGDTV 119
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK+++VVVLLCR PCA K+ NWD +QW+PLI DR LS
Sbjct: 120 LECYNCGRKNVFLLGFVSAKSEAVVVLLCRIPCA---QTKNANWDTDQWQPLIEDRQLLS 176
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGY 279
W+ + PTE+E+ + R +T +QI+KLE W+ N +AT D++ P E +LLRY+D Y
Sbjct: 177 WVAEQPTEEEKLKARLITPSQISKLEAKWRSNKDATINDIDAPEEQEAIPPLLLRYQDAY 236
Query: 280 QYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 327
+YQ +GPL+KLEADYDK+LKESQ E+++V W + LN + +A F+L+
Sbjct: 237 EYQRSYGPLIKLEADYDKQLKESQALEHISVSWSLALNNRHLASFTLS 284
Score = 37 (18.1 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEADYDKRL-KE 356
F++ K GY Y I G V ++ +D L KE
Sbjct: 368 FAIDKKSISGYLYYKILGHQV-VDISFDVPLPKE 400
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 1788 (634.5 bits), Expect = 4.0e-254, Sum P(2) = 4.0e-254
Identities = 346/618 (55%), Positives = 449/618 (72%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRL 390
D +QYQ FGPLVKLE DYDK LKESQ E++ V+W +GLN + +A F+L+ + D+++
Sbjct: 266 DAFQYQRSFGPLVKLEGDYDKNLKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKV 325
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIW 449
GDE+ LRYS + + W G G+++++P+ + +E LEL S PT+ TT F+ +F+W
Sbjct: 326 AVGDEIILRYSGNQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAEFVW 385
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K TS+DRMQ A++ FA D++SVS++IYH+LLGH V + F LPK FS P L +LN SQ
Sbjct: 386 KGTSYDRMQQAMKDFATDEESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELNVSQ 445
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
AV+ +QRPLSLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L K+
Sbjct: 446 TNAVRTVLQRPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLD 505
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRY 629
GL VVR+ AKSRE ++S VS LALHN + N S AD Y
Sbjct: 506 LLGLNVVRLTAKSREDVESSVSHLALHNLV-NSNAKGELKKLIKLKNQVGELSVADTNNY 564
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
L +++E +L+ A+V+CCTCVGA D RL + +F ++LIDES QA+EPE ++P++ GAK
Sbjct: 565 LKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQASEPEVLIPIVKGAK 624
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q+ILVGDH QLGPV++ KKAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN
Sbjct: 625 QVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNM 684
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +D+R + + FPWPV D PM+F+ G+EE++ SG SY+NR EA NVEK
Sbjct: 685 FYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEK 744
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGRE 867
I T+ + G+KPEQIGVITPYEGQRA+LVQ M +L K Y +E+ SVDAFQGRE
Sbjct: 745 IITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGRE 804
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II+SCVR+ND Q IGFL+DPRRLNVALTRAKYG++++GNP+ L + LWN+LL ++
Sbjct: 805 KDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFR 864
Query: 928 EQKVLVEGPLNNLKESLI 945
E+ LV+GPL+NL+ S++
Sbjct: 865 EKGCLVDGPLDNLQLSMV 882
Score = 682 (245.1 bits), Expect = 4.0e-254, Sum P(2) = 4.0e-254
Identities = 118/229 (51%), Positives = 160/229 (69%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGIH+P VI CN C KWFCN + ++S SHI+ HL+ ++H +V+LH++ LG+T
Sbjct: 91 HACAYCGIHNPNSVIKCNTCNKWFCNAKTNSSSSHIVTHLIMSRHNQVSLHEESELGDTT 150
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD +W+ LI DR FLS
Sbjct: 151 LECYNCGNKNVFILGFVSAKQESVVVILCRLPCARS---KDVNWDTSEWQALIEDRQFLS 207
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLRYEDG 278
WL PTE + R +T QI+KLE W+ N AT D++ +++ +L+RY D
Sbjct: 208 WLAPPPTEDDLIEARLITPQQISKLEAQWRLNRAATINDIDNNKEAEQEVLPILMRYNDA 267
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 327
+QYQ FGPLVKLE DYDK LKESQ E++ V+W +GLN + +A F+L+
Sbjct: 268 FQYQRSFGPLVKLEGDYDKNLKESQALEHIQVKWALGLNNRHLASFTLS 316
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 1788 (634.5 bits), Expect = 4.0e-254, Sum P(2) = 4.0e-254
Identities = 346/618 (55%), Positives = 449/618 (72%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD-GDMRL 390
D +QYQ FGPLVKLE DYDK LKESQ E++ V+W +GLN + +A F+L+ + D+++
Sbjct: 266 DAFQYQRSFGPLVKLEGDYDKNLKESQALEHIQVKWALGLNNRHLASFTLSTFETSDLKV 325
Query: 391 MQGDELKLRYSYDASKTWSGLGHVIKIPDNFGDEVGLELK-SSAGAPTEATTGFSVDFIW 449
GDE+ LRYS + + W G G+++++P+ + +E LEL S PT+ TT F+ +F+W
Sbjct: 326 AVGDEIILRYSGNQGEPWEGHGYILRLPNAYQEEFTLELNPSKIIPPTQLTTDFTAEFVW 385
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
K TS+DRMQ A++ FA D++SVS++IYH+LLGH V + F LPK FS P L +LN SQ
Sbjct: 386 KGTSYDRMQQAMKDFATDEESVSSFIYHKLLGHEVLPIEFDIDLPKKFSHPKLTELNVSQ 445
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
AV+ +QRPLSLIQGPPGTGKTVTSATI+Y L K +LVCAPSN+AVD L K+
Sbjct: 446 TNAVRTVLQRPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDHLAAKLD 505
Query: 570 RTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRY 629
GL VVR+ AKSRE ++S VS LALHN + N S AD Y
Sbjct: 506 LLGLNVVRLTAKSREDVESSVSHLALHNLV-NSNAKGELKKLIKLKNQVGELSVADTNNY 564
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK 689
L +++E +L+ A+V+CCTCVGA D RL + +F ++LIDES QA+EPE ++P++ GAK
Sbjct: 565 LKLSRSSEMKVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQASEPEVLIPIVKGAK 624
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNF 749
Q+ILVGDH QLGPV++ KKAA AGL QSLFERLV LG P RLEVQYRMHP LS+FPSN
Sbjct: 625 QVILVGDHQQLGPVILDKKAADAGLKQSLFERLVFLGHVPIRLEVQYRMHPCLSEFPSNM 684
Query: 750 FYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
FYEGSLQNGV +D+R + + FPWPV D PM+F+ G+EE++ SG SY+NR EA NVEK
Sbjct: 685 FYEGSLQNGVTSDDRLIEESTFPWPVIDTPMMFWANYGREELSASGNSYLNRVEAMNVEK 744
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI--YQEIEVASVDAFQGRE 867
I T+ + G+KPEQIGVITPYEGQRA+LVQ M +L K Y +E+ SVDAFQGRE
Sbjct: 745 IITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQGRE 804
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYK 927
KD II+SCVR+ND Q IGFL+DPRRLNVALTRAKYG++++GNP+ L + LWN+LL ++
Sbjct: 805 KDFIILSCVRANDSQSIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHLLIHFR 864
Query: 928 EQKVLVEGPLNNLKESLI 945
E+ LV+GPL+NL+ S++
Sbjct: 865 EKGCLVDGPLDNLQLSMV 882
Score = 682 (245.1 bits), Expect = 4.0e-254, Sum P(2) = 4.0e-254
Identities = 118/229 (51%), Positives = 160/229 (69%)
Query: 100 HACKYCGIHDPAYVIMCNICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETV 159
HAC YCGIH+P VI CN C KWFCN + ++S SHI+ HL+ ++H +V+LH++ LG+T
Sbjct: 91 HACAYCGIHNPNSVIKCNTCNKWFCNAKTNSSSSHIVTHLIMSRHNQVSLHEESELGDTT 150
Query: 160 LECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRSFLS 219
LECY CG +N+F+LGF+ AK +SVVV+LCR PCA KD+NWD +W+ LI DR FLS
Sbjct: 151 LECYNCGNKNVFILGFVSAKQESVVVILCRLPCARS---KDVNWDTSEWQALIEDRQFLS 207
Query: 220 WLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEK-PGVDEDPHQVLLRYEDG 278
WL PTE + R +T QI+KLE W+ N AT D++ +++ +L+RY D
Sbjct: 208 WLAPPPTEDDLIEARLITPQQISKLEAQWRLNRAATINDIDNNKEAEQEVLPILMRYNDA 267
Query: 279 YQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLA 327
+QYQ FGPLVKLE DYDK LKESQ E++ V+W +GLN + +A F+L+
Sbjct: 268 FQYQRSFGPLVKLEGDYDKNLKESQALEHIQVKWALGLNNRHLASFTLS 316
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 1652 (586.6 bits), Expect = 6.2e-238, Sum P(2) = 6.2e-238
Identities = 322/635 (50%), Positives = 437/635 (68%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLM 391
D Y+Y+ I PL++LEA ++K L+ES +Q +++ W G+NK+ A F +++D + +++
Sbjct: 363 DAYEYREIISPLIELEAKHEKELRESLSQSGISIEWSQGINKRYTATFPFSRSDLEFKVV 422
Query: 392 QGDELKLRY--SYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIW 449
GDELKL++ S W G VI I D + + LE KS + + ++ +W
Sbjct: 423 PGDELKLQFISSTGGVIEWEDTGRVIHIDDE--NLLSLETKSRCSFDSGPKGSYRMEMVW 480
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH-NVDEVLFRCHLPKHFSAPNLPDLNRS 508
+STS +R+ A++ FA+ +Q++S+Y+YH LLGH ++ LP +F NLP LN S
Sbjct: 481 RSTSSERILSAMKSFAIKEQALSSYLYHALLGHPDIPPAPLDIQLPTNFHLKNLPRLNES 540
Query: 509 QVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQT-GSP-VLVCAPSNIAVDQLTE 566
Q+ AV + PLSLIQGPPGTGKTV S+ I++ LVK G+ VLVC PSN+A+DQLT
Sbjct: 541 QISAVNKVLTAPLSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCTPSNVAIDQLTG 600
Query: 567 KIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEM--NSXXXXXXXXXXXXXXXSSA 624
K+H GLKVVR+ +K RE + SPV L LH Q+ ++ + S+
Sbjct: 601 KLHEIGLKVVRLSSKLREEVASPVEHLTLHKQVYKLDQMGDGELGKLRKLKEAFGSLSNE 660
Query: 625 DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPV 684
DEKRY L++ E ++L ADVIC TCVGAGDPRL + +F ILIDES QA+EPEC++P+
Sbjct: 661 DEKRYIYLRRMMEMAILRKADVICATCVGAGDPRLSQFRFPHILIDESTQASEPECLIPL 720
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
++GAKQ+ILVGDH QLGPV++CKK AGLSQSLFERL+ LG P RL +QYRMHP L++
Sbjct: 721 MMGAKQVILVGDHRQLGPVLLCKKVVDAGLSQSLFERLISLGHHPERLTIQYRMHPSLTE 780
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEA 804
FPSN YEG L + + +R S+ FPWP P PM F+ G EEI+ SGTS++N TEA
Sbjct: 781 FPSNTSYEGQLVSELSHTDRD-SQSKFPWPQPKDPMFFFNCTGSEEISSSGTSFINTTEA 839
Query: 805 SNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
S EKI T+F+ G P QIG+ITPYEGQRA++ HMQ G L ++Y+ IEVASVD+FQ
Sbjct: 840 SICEKIVTKFLELGSLPGQIGIITPYEGQRAYITSHMQKSGKLNLELYKSIEVASVDSFQ 899
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
GREKD II+SCVRSND+QGIGFL DPRRLNVALTRA++G+I++GN KVLSK PLWN+L++
Sbjct: 900 GREKDYIILSCVRSNDYQGIGFLQDPRRLNVALTRARFGLIILGNAKVLSKDPLWNSLIS 959
Query: 925 FYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
+K + VLVEG L NLK+S ++ KPK+ + + +
Sbjct: 960 HFKNKNVLVEGSLANLKQSPVILQKPKKLYGQGKL 994
Score = 665 (239.2 bits), Expect = 6.2e-238, Sum P(2) = 6.2e-238
Identities = 121/256 (47%), Positives = 172/256 (67%)
Query: 97 LPPHACKYCGIHDPAYVIMCN--ICKKWFCNGRGHTSGSHIINHLVRAKHKEVTLHKDGP 154
LP HAC YC H+ + V+ C C KWFCNG+G T SHII HLV++KHKEV LH +
Sbjct: 179 LPAHACAYCATHELSTVVKCMHPSCGKWFCNGKGKTKSSHIITHLVKSKHKEVALHPESS 238
Query: 155 LGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLI-- 212
G+T LEC+ CG +NIF+LGFI A+ +SVVVLLCR PCA+ S K++NWD W+PLI
Sbjct: 239 FGDTTLECFNCGCKNIFLLGFITARTESVVVLLCRDPCASGPS-KEVNWDMSSWQPLING 297
Query: 213 ADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKP-GVDEDPHQV 271
+++F SWLVK P++ + +R RQ+T QI +LEE WK + EAT D+E P DE P
Sbjct: 298 GEKAFCSWLVKTPSQVDSERSRQITIQQILRLEEFWKMDPEATLLDIEAPRSDDEKPAST 357
Query: 272 LLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG 331
L Y+D Y+Y+ I PL++LEA ++K L+ES +Q +++ W G+NK+ A F +++D
Sbjct: 358 QLAYKDAYEYREIISPLIELEAKHEKELRESLSQSGISIEWSQGINKRYTATFPFSRSD- 416
Query: 332 DGYQYQNIFGPLVKLE 347
+++ + G +KL+
Sbjct: 417 --LEFKVVPGDELKLQ 430
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 142/190 (74%), Positives = 171/190 (90%)
Query: 763 ERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE 822
+R DF WP PDKPM FYVTQGQEEIA SGTSY+NRTEA+NVEKITT+ ++ G KP+
Sbjct: 2 DRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPD 61
Query: 823 QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
QIG+ITPYEGQR++LVQ+MQ+ GSL K+YQE+E+ASVDAFQGREKD II+SCVR+N+HQ
Sbjct: 62 QIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ 121
Query: 883 GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKE 942
GIGFLNDPRRLNVALTRA+YG+I++GNPK LSKQPLWN+LL++YKEQK LVEGPLNNL+E
Sbjct: 122 GIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNNLRE 181
Query: 943 SLILFSKPKQ 952
SL+ FSKP++
Sbjct: 182 SLMQFSKPRK 191
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 435 (158.2 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 124/388 (31%), Positives = 200/388 (51%)
Query: 504 DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVD 562
+LN SQ V+ + ++++QGPPGTGKT T I+ QL+ + P+LV A SNIA+D
Sbjct: 639 NLNESQKKGVQSVLNNSITVLQGPPGTGKTSTIYEIILQLLDSLNTYPILVVAASNIAID 698
Query: 563 QLTEKIH-RTGLKVVRVCA--KSREAIDS-PVSFLALHNQIRN-MEMNSXXXXXXXXXXX 617
+ EK+ + G ++R+ A K R+ S P++ + LH+++ + M M
Sbjct: 699 NIAEKLMTKHGKDILRITAAEKERDYNRSHPLASICLHHKMYDAMPMKYQQVMDEMKRGM 758
Query: 618 XXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATE 677
+ K+Y + ++ A V+ T V AG + L ++IDE+ Q++E
Sbjct: 759 APSIGTTAYKKYAQERFFLSNQIVTQAKVVLATPVVAGGIKSLN-NVRVVIIDEATQSSE 817
Query: 678 PECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI--RPFRLEV 734
P ++P+ L ++L+LVGD QL C LS SLFER+++ G P L+
Sbjct: 818 PTTLIPLALPSVEKLVLVGDQKQLS----CFSLI-PNLSLSLFERVLLNGTYKTPHMLDT 872
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG---QEEI 791
QYRMHPE+S+FP FY G L++G+ A+ R+ V P+ F+ T+G ++ +
Sbjct: 873 QYRMHPEISEFPRTKFYGGLLKDGIDANARQSEG------VISSPLYFWDTKGNAREQSV 926
Query: 792 AG-----SGTSYVNRTEASNVEKIT-TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQG 845
G +Y NR E ++++ T I G+KPEQIG+ITPY GQR + +
Sbjct: 927 RNFLREDGGYTYTNRDEIGYIQQVLRTLIITKGVKPEQIGIITPYSGQRDLISATLVKDD 986
Query: 846 SL-PAKIYQEIEVASVDAFQGREKDLII 872
+ P+ + EV +D + K + I
Sbjct: 987 VINPSNEQMKTEV-DIDDLKNDSKPVTI 1013
Score = 229 (85.7 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 47/83 (56%), Positives = 57/83 (68%)
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
I I +AS+DAFQGREKD +IMSCVRSN IGFL D RRLNVALTRAKYG+I++G+
Sbjct: 1015 IVSGIMIASIDAFQGREKDYMIMSCVRSNTKGVIGFLRDERRLNVALTRAKYGLIMVGDK 1074
Query: 911 KVLSK-QPLWNNLLNFYKEQKVL 932
K L LW L + +K +
Sbjct: 1075 KCLQNGDKLWKEYLQYLDSKKAI 1097
Score = 63 (27.2 bits), Expect = 1.1e-57, Sum P(3) = 1.1e-57
Identities = 24/76 (31%), Positives = 35/76 (46%)
Query: 124 CNGRGHTSGSHIINHLVRAKHKEVTLHKDGPLGETVLECYTCGVRNIFVLGFIPAKADSV 183
C+ + +G I HL +HK V L L ET LEC C NI L + + +
Sbjct: 11 CSEQFSEAGQ-IQKHLSTTRHKSVRLES---LDET-LECEECSDSNIHQLSIVRYGFNDM 65
Query: 184 VVLLCRTPCAAQNSLK 199
LLC+ C +++ K
Sbjct: 66 S-LLCQI-CLEKDNKK 79
Score = 43 (20.2 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
GS + N+T + + T R G P G TP G+
Sbjct: 225 GSNGAANNKTSTTGTKNNTKPTSRYGKSPSVSGKSTPKPGK 265
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 433 (157.5 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 136/413 (32%), Positives = 204/413 (49%)
Query: 479 LLGHN-VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSA 537
LLG + E+ F L FS+ L NRSQ AV+H + ++++QGPPGTGKT T
Sbjct: 627 LLGQKPIKEIYFDNRLK--FSSDKL---NRSQKTAVEHVLNNSITILQGPPGTGKTSTIE 681
Query: 538 TIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSRE---AIDSPVS 591
I+ Q++++ + P+L A SNIA+D + EKI +R +K++R+ +K +E + D P+
Sbjct: 682 EIIIQVIERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLG 741
Query: 592 FLALHNQI-RNMEMNSXXXXXXXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCT 650
+ LHN + +N+ + S D K Y+ K ++ + +I T
Sbjct: 742 EICLHNIVYKNLSPDMQVVANKTRRGEMISKSE-DTKFYKE-KNRVTNKVVSQSQIIFTT 799
Query: 651 CVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKK 708
+ AG L IK ++I DE+ Q++E +VP+ L G + + VGD QL +
Sbjct: 800 NIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGDEKQLSSFSNIPQ 859
Query: 709 AARAGLSQSLFERLVVLGI--RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKL 766
L SLFER++ G P L+ QYRMHP++S+FP Y G L++GV DE+K
Sbjct: 860 -----LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGELKDGV-TDEQKA 913
Query: 767 SKIDFPWPVPDKPMLFYVTQ-GQEEIAGS------GTSYVNRTEASNVEKITTRFIRCGM 819
WP P+ FY G E S G +Y N+ E + KI +
Sbjct: 914 ------WPGVQHPLFFYQCDLGPESRVRSTQRDIVGFTYENKHECVEIVKIIQILMLDKK 967
Query: 820 KP-EQIGVITPYEGQRAFLVQHMQYQGSL-PAKI-----YQEIEVASVDAFQG 865
P E+IGVITPY QR L + + P +I Y EIE+ + QG
Sbjct: 968 VPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISMQQEYDEIELFNAAGSQG 1020
Score = 247 (92.0 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 56/119 (47%), Positives = 73/119 (61%)
Query: 819 MKPEQIGVITPYEGQRAFLVQHMQ-YQGSLP---AKIYQEIEVASVDAFQGREKDLIIMS 874
+ P+QI + Y+ F Q GSL I + VA+VD+FQG EK II S
Sbjct: 996 INPKQISMQQEYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGHEKSFIIFS 1055
Query: 875 CVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLNFYKEQKVL 932
CVR+N IGFL D RRLNVALTRAK+G+IV+GN VL K PLW + + + +EQ+V+
Sbjct: 1056 CVRNNTENKIGFLRDKRRLNVALTRAKHGLIVVGNKNVLRKGDPLWKDYITYLEEQEVI 1114
Score = 38 (18.4 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 42 SQSQTQASQLDSVNQIQVNGK 62
S++ T +L++ NQ + NGK
Sbjct: 430 SKTTTMPKKLETKNQEKNNGK 450
Score = 38 (18.4 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 140 VRAKHKEVTLHKDGPLGETVL 160
+ +K KE D PLGE L
Sbjct: 725 ILSKKKEQQYSDDHPLGEICL 745
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 566 (204.3 bits), Expect = 3.3e-54, P = 3.3e-54
Identities = 180/578 (31%), Positives = 284/578 (49%)
Query: 393 GDELKLRYSYDASKTW-------SGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSV 445
GD + +R + +SK S G V ++ + + + LKS P+ T SV
Sbjct: 96 GDVVSIRQDFQSSKKKRPNETDISVEGVVTRVHER---HISVALKSEEDIPSSVTR-LSV 151
Query: 446 DFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 505
+ +++RM+ + +F +++ L+G +V L N +L
Sbjct: 152 VKLVNRVTYERMRHTMLEFKRSIPEYRNSLFYTLIGRKKADVSIDQKLIGDIKYFN-KEL 210
Query: 506 NRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
N SQ AVK +I + LSLI GPPGTGKT T I+ QLV + +LVC SN+AVD +
Sbjct: 211 NASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLVLRN-KRILVCGASNLAVDNI 269
Query: 565 TEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALHNQ----IRNMEMNSXXXXXXXXXXX 617
+++ +G+ +VR+ +R +D + L+ IR + +
Sbjct: 270 VDRLSSSGIPMVRLGHPARLLPSILDHSLDVLSRTGDNGDVIRGISEDIDVCLSKITKTK 329
Query: 618 XXXXSSADEKRYRMLKKNAEK-------SLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
K R L+K+ K +++ + V+ CT GAG +L +F +++ID
Sbjct: 330 NGRERREIYKNIRELRKDYRKYEAKTVANIVSASKVVFCTLHGAGSRQLKGQRFDAVIID 389
Query: 671 ESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-G--I 727
E+ QA EP+C +P +LG ++IL GDH QL P V K+ S+FERLV G +
Sbjct: 390 EASQALEPQCWIP-LLGMNKVILAGDHMQLSPNVQSKRPYI-----SMFERLVKSQGDLV 443
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF--PWPVPDKPMLFYVT 785
+ F L +QYRMH +SKFPS+ FY+ L +R L ++ + D P+ FY T
Sbjct: 444 KCF-LNIQYRMHELISKFPSDTFYDSKLVPAEEVKKRLLMDLENVEETELTDSPIYFYDT 502
Query: 786 QG--QEEIAGSGT------SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL 837
G QE+ S N EA V + + G++ + I V+TPY Q A +
Sbjct: 503 LGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKDIAVVTPYNAQVALI 562
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
Q ++ +G E+E+ SVD QGREK+ II S VRSND + +GFL + RRLNVA+
Sbjct: 563 RQLLKEKGI-------EVEMGSVDKVQGREKEAIIFSLVRSNDVREVGFLAEKRRLNVAI 615
Query: 898 TRAKYGIIVIGNPKVLS-KQPLWNNLLNFYKEQKVLVE 934
TR K + VIG+ + ++ ++F +E ++++
Sbjct: 616 TRPKRHLCVIGDSNTVKWASEFFHQWVDFLEENAIVMD 653
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 482 (174.7 bits), Expect = 3.1e-50, Sum P(2) = 3.1e-50
Identities = 133/382 (34%), Positives = 193/382 (50%)
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLA--LHNQIRNMEMNSXXXXXXXXX 615
N A+ +K T LK++++ K E ID + LA L Q N N
Sbjct: 1492 NSAIANEDQKKENTRLKIIKIKEKQVE-IDKQIKDLAERLKQQEDNKLRNEITKLNYTRE 1550
Query: 616 XXXXXXSSA-DEKR-----YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI--KFHSI 667
A DE+R Y K+N +++ + +I T G+G L F +
Sbjct: 1551 KYNNDLKLAKDEERRFHEQYSNTKRNLYINIIGRSQIILSTLSGSGYDYLFTATKNFDLV 1610
Query: 668 LIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI 727
++DE+ QA E ++P+ K+ ILVGD QL P + K A + SLF+RL+ G+
Sbjct: 1611 IVDEAAQAVELSTLIPLRHDVKKCILVGDPQQLPPTTISKVATKFQYEISLFQRLMNCGM 1670
Query: 728 RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK--PMLFY-V 784
P L+ QYRMHP +SKFPS FY G L++G E K D+ + P++FY +
Sbjct: 1671 APTVLKTQYRMHPMISKFPSKIFYRGELEDGKNVREYKQ---DYYNDSASRFGPLVFYDL 1727
Query: 785 TQGQEEIAGSGTSYVNRTEASNVEKITTRFIRC--GMKPEQIGVITPYEGQRAFLVQHMQ 842
E+ S S N TE + I + I K +IGVITPY+ Q L
Sbjct: 1728 FDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYPNTKDLEIGVITPYKSQSVDLFN--A 1785
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
++G YQ +EV+++D FQG+EKD +I S VR++ IGFL+D RR+NV LTRAKY
Sbjct: 1786 FKG------YQNVEVSTIDGFQGKEKDFVIFSSVRAHSGHSIGFLSDIRRMNVGLTRAKY 1839
Query: 903 GIIVIGNPKVLSKQPLWNNLLN 924
++++GN +LS W NL+N
Sbjct: 1840 SMVILGNSSLLSNNDDWGNLVN 1861
Score = 134 (52.2 bits), Expect = 3.1e-50, Sum P(2) = 3.1e-50
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 505 LNRSQVYAVKHAIQR--PLSLIQGPPGTGKTVTS-------ATIVYQLVKQTGSP-VLVC 554
LN SQ+ A+ ++ SL+QGPPGTGKT T T++ + K P +LVC
Sbjct: 1372 LNESQLSAIASTLKNLGGFSLLQGPPGTGKTKTILSLLSVFTTVLTNIEKSHSDPKILVC 1431
Query: 555 APSNIAVDQLTEKIHRTGL 573
APSN AVD++ +I + GL
Sbjct: 1432 APSNAAVDEIALRIKKDGL 1450
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 504 (182.5 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 138/397 (34%), Positives = 213/397 (53%)
Query: 566 EKIHRTGLKV-VRVCAKSREAIDSPVSFLALHNQI----RNM-EMNSXXXXXXXXXXXXX 619
EK+H+ ++ VRV A REA++ + H Q RN+ E+
Sbjct: 1470 EKLHQEAGEIKVRVAAL-REALEQARA-AGDHGQTNSLQRNLDELRKKQGQIGAQIDRDK 1527
Query: 620 XXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDP--RLLKIKFHSILIDESMQATE 677
+ + + ++N ++S+L A V+C T GAG + L+++F +++IDE+ Q E
Sbjct: 1528 ASGNTYAREAEIKRRNIQQSILSEAHVLCATLSGAGHDMFKSLQVEFETVIIDEAAQCVE 1587
Query: 678 PECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI-RPFRLEVQY 736
++P+ GA + ILVGD QL P V+ + AAR G QSLF R+ + L+ QY
Sbjct: 1588 LSALIPLKYGASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQNHPGKVHLLDCQY 1647
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML----FYVTQGQEEIA 792
RMHPE+S +PS FYEG L +G +D KL + PW D P+L F+ +G +E
Sbjct: 1648 RMHPEISLYPSKEFYEGLLADG--SDMAKLRQQ--PWH--DNPLLGPYRFFDVEGIQERG 1701
Query: 793 GSGTSYVNRTEASNVEKITTRF-----IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
G S VN E + +I T+F MK + IG+ITPY+ Q L Q ++Q
Sbjct: 1702 SRGQSLVNTNEINVAIQIYTKFQADYASSIDMKGK-IGIITPYKAQLFALRQ--KFQERW 1758
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
+ ++IE + DAFQGRE ++II SCVR++ GIGF+ D RR+NV LTRA+ + ++
Sbjct: 1759 GEGVLEDIEFNTTDAFQGRECEIIIFSCVRASPTGGIGFMTDIRRMNVGLTRARSSLWIL 1818
Query: 908 GNPKVLSKQPLWNNLLNFYKEQKVLVEGPL-NNLKES 943
G+ + L + WN L+ K + +G + + L+ S
Sbjct: 1819 GDSRALRQGEFWNKLIEDSKARDRYTQGSIISQLRNS 1855
Score = 104 (41.7 bits), Expect = 1.5e-49, Sum P(2) = 1.5e-49
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLV--KQTGSPVLVCAPSNIAV 561
LNR Q A+ +A + +L+QGPPGTGKT T +V L+ K + +P P+N A
Sbjct: 1327 LNRGQAAAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALLTGKISRAPPTRIKPANGAD 1386
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS 606
+ + +K+ VCA S A+D V L L I++ N+
Sbjct: 1387 EPMAQKL--------LVCAPSNAAVDELV--LRLKAGIKDTNGNT 1421
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 503 (182.1 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 125/340 (36%), Positives = 189/340 (55%)
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLK--IKFHSILIDESMQATEPECMVPVILGA 688
+LKK + LL AD++C T +G LL + F +++IDE+ QA E ++P+ G
Sbjct: 1475 VLKKQIQNQLLQEADIVCATLSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKYGC 1534
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFRLEVQYRMHPELSKFPS 747
+ ++VGD QL P V+ K +A+ G SQSL+ R+ L +QYRM+PE+S+FPS
Sbjct: 1535 ESCVMVGDPNQLPPTVLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRMNPEISRFPS 1594
Query: 748 NFFYEGSLQNGVCADERKLSKIDF-PWPVPDKPML----FYVTQGQEEIAGSGTSYVNRT 802
FFY L +G +S + PW + P L F+ G E + S + Y N
Sbjct: 1595 KFFYNSKLLDGP-----NMSAVTSRPWH--EDPQLGIYRFFNVHGTEAFSNSKSLY-NVE 1646
Query: 803 EASNVEKITTRFIRCGMKPE---QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
EAS + + R I+C + + +IGV+TPY Q L Q+Q + I++ +++ +
Sbjct: 1647 EASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQL--RSQFQRKYGSIIFKHLDIHT 1704
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VD FQG+EKD+II SCVRS+ GIGFL D RRLNVALTRAK + ++GN K L ++ ++
Sbjct: 1705 VDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQEDIF 1764
Query: 920 NNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKNNM 959
+L+ K + V + N K S + S + NN+
Sbjct: 1765 YSLIEDAKTRGVWRDLSANQFKNSKSI-SNVSTHLASNNL 1803
Score = 103 (41.3 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 37/126 (29%), Positives = 59/126 (46%)
Query: 460 ALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAV-KHAIQ 518
+LR+FA + R+L NV + K +N Q YA+ ++
Sbjct: 1226 SLREFAALKSLRHLPLSQRILDANVTRLPSNFTDDKKQKIMKSYGVNEPQAYAIYASSVN 1285
Query: 519 RPLSLIQGPPGTGKT----------VTSAT------IVYQLVKQTGSPVLVCAPSNIAVD 562
+LIQGPPGTGKT +TS++ + Q K + + +L+CAPSN A+D
Sbjct: 1286 DGFTLIQGPPGTGKTKTILGMIGAVLTSSSQGLQFNVPGQTRKTSKNKILICAPSNAAID 1345
Query: 563 QLTEKI 568
++ +I
Sbjct: 1346 EILLRI 1351
Score = 40 (19.1 bits), Expect = 1.6e-48, Sum P(3) = 1.6e-48
Identities = 18/83 (21%), Positives = 32/83 (38%)
Query: 226 TEQEQQRGRQVTSAQIAKLEEV---WKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQ 282
T+Q Q R + + + +V W A++ V+ Q Y D Y+
Sbjct: 1044 TQQSAQLARLRLNPDVQEFYKVILGWNPLADS----FSASNVEMQCVQAKFTYNDSNAYE 1099
Query: 283 NIFGPLVKLE--ADYDKRLKESQ 303
+F P++ E A ++E Q
Sbjct: 1100 KVFKPMLFHECWAQVKSAVEEKQ 1122
Score = 37 (18.1 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 413 HVIKIPDNFGDEVGLELKSSAG 434
+V ++P NF D+ ++ S G
Sbjct: 1249 NVTRLPSNFTDDKKQKIMKSYG 1270
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 500 (181.1 bits), Expect = 5.3e-47, P = 5.3e-47
Identities = 151/457 (33%), Positives = 230/457 (50%)
Query: 495 KHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
K F+ N +L++SQ A+ A+ + + L+ GPPGTGKT T IV Q VK+ GS +L
Sbjct: 181 KSFTPFN-KNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKR-GSKILA 238
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSR---EAIDSPVSFLALH-------NQIRNME 603
CA SNIAVD + E++ +K+VRV +R + +DS + L N IR E
Sbjct: 239 CAASNIAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRK-E 297
Query: 604 MNSXXXXXXXXXXXXXXXSSADE-----KRYRMLKKNAEKSLLDNADVICCTCVGAGDPR 658
M + E K R ++ A ++ NADVI T GA +
Sbjct: 298 MKALNGKLLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRK 357
Query: 659 LLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
L F ++IDE QA E C + ++ G++ IL GDH QL P + +A R GL ++L
Sbjct: 358 LDNRTFDLVIIDEGAQALEVACWIALLKGSR-CILAGDHLQLPPTIQSAEAERKGLGRTL 416
Query: 719 FERLVVL-G--IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID--FPW 773
FERL L G I+ L VQYRMH + + S Y+ + L ++
Sbjct: 417 FERLADLYGDEIKSM-LTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKS 475
Query: 774 PVPDKPMLFYVTQG--QEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYE 831
+ +L T G EE S N EA R + G++P IG+ITPY
Sbjct: 476 SSTEATLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYA 535
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPR 891
Q L++ ++ G K+ +++E+++VD FQGREK+ II+S VRSN + +GFL D R
Sbjct: 536 AQ-VMLLRILR--GK-EEKL-KDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQR 590
Query: 892 RLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
R+NVA+TR++ ++ + + +S ++ +++E
Sbjct: 591 RMNVAVTRSRRQCCIVCDTETVSSDAFLKRMIEYFEE 627
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 502 (181.8 bits), Expect = 6.0e-47, Sum P(2) = 6.0e-47
Identities = 125/344 (36%), Positives = 189/344 (54%)
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL--KIKFHSILIDESMQATEPE 679
S K +L+K A+K++L ADV+C T G+G + + F +++IDE+ QA E +
Sbjct: 1328 SFTKNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAHSSLNFSTVIIDEAAQAVELD 1387
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRLEVQYRM 738
++P+ GAK+ ILVGD QL P V+ KKAA SQSLF R+ + L +QYRM
Sbjct: 1388 TIIPLRYGAKKCILVGDPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRM 1447
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLF--YVTQGQEEIAGSGT 796
HP++S FPS FY+ L++G + K W V K + + +G+E + + +
Sbjct: 1448 HPDISHFPSKKFYDSRLEDG----DNMAEKTQQVWHVNPKFTQYRLFDVRGKERTSNTMS 1503
Query: 797 SY-VNRTE--ASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
+Y + E + V+++ +F +IGVITPY Q L ++
Sbjct: 1504 TYNLEEVEYLVNMVDELLNKFPDVNFTG-RIGVITPYRSQLHEL--RRAFKVKYGKSFMS 1560
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
I++ +VD FQG+EKD+I SCV+S GIGFL D RRLNVALTRA+ +++IGN + L
Sbjct: 1561 TIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLNVALTRARSSLLIIGNMETL 1620
Query: 914 SKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
LW +L++ +K LVE P + + LI S+ + KN
Sbjct: 1621 KTDDLWGSLVDDALSRK-LVESPHIDSEGRLITISRTSEKRMKN 1663
Score = 79 (32.9 bits), Expect = 6.0e-47, Sum P(2) = 6.0e-47
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 482 HNVDEVLFR--CHLP-KHFS-----APNLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGK 532
H D+++ C P KH S A +N Q A+ A+ +LIQGPPGTGK
Sbjct: 1099 HLADDIIRARPCSQPVKHSSSEIKAAMKRYQVNEPQAKAIMCALDNNGFTLIQGPPGTGK 1158
Query: 533 TVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAID 587
T T I+ L+ S + P+ + + TE + + +CA S A+D
Sbjct: 1159 TKTIIGIISALLVDL-SRYHITRPNQQS--KSTESKQQ-----ILLCAPSNAAVD 1205
Score = 59 (25.8 bits), Expect = 7.5e-45, Sum P(2) = 7.5e-45
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 542 QLVKQTGSP--VLVCAPSNIAVDQLTEKIHR 570
Q K T S +L+CAPSN AVD++ ++ R
Sbjct: 1183 QQSKSTESKQQILLCAPSNAAVDEVLLRLKR 1213
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 470 (170.5 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 131/404 (32%), Positives = 211/404 (52%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXX 610
VLVCAPSN A+D++ ++ +GL+ + + + L H+ + ++ ++
Sbjct: 377 VLVCAPSNSALDEIVLRLLSSGLRDENAQTYTPKIVRIG---LKAHHSVASVSLDHLVAQ 433
Query: 611 XXXXXXXXXXXSSADEKRYRMLKKNAEK---SLLDNADVICCTCVGAGDPRLLKIK--FH 665
S+ D+ + + + ++L+ A ++ T +G L K F
Sbjct: 434 KRG--------SAIDKPKQGTTGTDIDSIRTAILEEAAIVFATLSFSGSALLAKSNRGFD 485
Query: 666 SILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
++IDE+ QA EP ++P+ KQ+ LVGD QL V+ A +G S+FERL
Sbjct: 486 VVIIDEAAQAVEPATLIPLATRCKQVFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKA 545
Query: 726 GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-V 784
G L+ QYRMHPE+ FPS FYEG+L++G +D + D+ P F+ +
Sbjct: 546 GYPVKMLKTQYRMHPEIRSFPSKQFYEGALEDG--SDIEAQTTRDWHKYRCFGPFCFFDI 603
Query: 785 TQGQE-EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-----QIGVITPYEGQ-RAFL 837
+G+E + G+ S VN E V I R + M PE Q+ +I+PY Q + F
Sbjct: 604 HEGKESQHPGATGSRVNLDEVEFVLLIYHRLVT--MYPELKSSSQLAIISPYNYQVKTFK 661
Query: 838 VQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVAL 897
+ + G+ K+ +++ +VD FQGREKD+ I SCVR+N++ IGFL++ RR+NV +
Sbjct: 662 DRFKEMFGTEAEKV---VDINTVDGFQGREKDVAIFSCVRANENGQIGFLSNSRRMNVGI 718
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL--VEGPLNN 939
TRAK ++V+G+ L PLW NL+ +++ L V PLNN
Sbjct: 719 TRAKSSVLVVGSAATLKSDPLWKNLIESAEQRNRLFKVSKPLNN 762
Score = 85 (35.0 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 504 DLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
+LN+SQ A+ + R LIQGPPGTGKT T +I+ ++ T + V
Sbjct: 257 NLNKSQKEAIDVGLSRKSFVLIQGPPGTGKTQTILSILGAIMHATPARV 305
Score = 55 (24.4 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 305 QENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVT 364
+E + +R L K + + + K+ G G + I GPL + +++ L +SQ +E +
Sbjct: 212 REYIALRSVSSLPFKDLIFTAAEKSCGFGDEAWKISGPLNEF---FNENLNKSQ-KEAI- 266
Query: 365 VRWDVGLNKKS 375
DVGL++KS
Sbjct: 267 ---DVGLSRKS 274
Score = 52 (23.4 bits), Expect = 1.0e-46, Sum P(3) = 1.0e-46
Identities = 14/61 (22%), Positives = 33/61 (54%)
Query: 218 LSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYED 277
L W K T++ +++ R+ + ++ ++ +KD + F+ E P + E+ +L+ +D
Sbjct: 24 LGWDYKQLTKENERKNRKDSKEKLNVVKNTYKD-VDDYFETFE-PLLFEEVKAQILQNKD 81
Query: 278 G 278
G
Sbjct: 82 G 82
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 477 (173.0 bits), Expect = 3.6e-46, Sum P(3) = 3.6e-46
Identities = 130/383 (33%), Positives = 211/383 (55%)
Query: 587 DSPVSFLALHN-QIRNMEMNSXXXXXXXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNAD 645
+SP+S + Q++ E++ +S + + + ++NA+ +L +D
Sbjct: 1504 ESPMSTEDISKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSD 1563
Query: 646 VICCTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPV 703
+IC T G+ L + IKF +++IDE+ Q TE ++P+ G K+ I+VGD QL P
Sbjct: 1564 IICSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPT 1623
Query: 704 VMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADE 763
V+ A+ +QSLF R+ P+ L+VQYRMHP +SKFPS+ FY+G L++G D
Sbjct: 1624 VLSGAASNFKYNQSLFVRMEK-NSSPYLLDVQYRMHPSISKFPSSEFYQGRLKDGPGMDI 1682
Query: 764 RKLSKIDFPWPV--PDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS-NVEKITTRFIRCGM 819
L+K PW P P F+ + G++E SY N E +E + F +
Sbjct: 1683 --LNKR--PWHQLEPLAPYKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDN 1738
Query: 820 KPE---QIGVITPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
K + +IG+I+PY Q + + +Y G + I + I+ ++D FQG+EK++I++SC
Sbjct: 1739 KIDFTGKIGIISPYREQMQKMRKEFARYFGGM---INKSIDFNTIDGFQGQEKEIILISC 1795
Query: 876 VRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV- 933
VR++D + +GFL D RR+NVALTRAK I V+G+ + L+K LW +L+ K++ L
Sbjct: 1796 VRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDAKDRSCLAY 1855
Query: 934 --EG---PLNNLKESLIL-FSKP 950
G P NN +S++ F+ P
Sbjct: 1856 ACSGFLDPRNNRAQSILRKFNVP 1878
Score = 103 (41.3 bits), Expect = 3.6e-46, Sum P(3) = 3.6e-46
Identities = 32/86 (37%), Positives = 47/86 (54%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQL-VKQTGSPVLVCAPSNIAV 561
LN SQ A+ +++ + SLIQGPPGTGKT T I+ Y L K S ++ P
Sbjct: 1335 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKNS 1394
Query: 562 DQLTEKIHRTGLKVVRVCAKSREAID 587
TE++ + K++ +CA S A+D
Sbjct: 1395 SN-TEQLLKKQ-KIL-ICAPSNAAVD 1417
Score = 62 (26.9 bits), Expect = 6.8e-42, Sum P(3) = 6.8e-42
Identities = 13/32 (40%), Positives = 24/32 (75%)
Query: 542 QLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
QL+K+ +L+CAPSN AVD++ ++ ++G+
Sbjct: 1399 QLLKK--QKILICAPSNAAVDEICLRL-KSGV 1427
Score = 48 (22.0 bits), Expect = 3.6e-46, Sum P(3) = 3.6e-46
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLN 372
F++AK G G Q +I G +VK + + +E E++ R +V +N
Sbjct: 1069 FAIAKAKGKGIQTVDINGKVVKRQTAAELAKQEL---EHMRKRLNVDMN 1114
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 463 (168.0 bits), Expect = 4.5e-46, Sum P(3) = 4.5e-46
Identities = 121/297 (40%), Positives = 172/297 (57%)
Query: 633 KKNAEKS-LLDNADVICCTCVGAGDPRLLKIKFHS--ILIDESMQATEPECMVPVILG-A 688
K EKS + A ++ T G+G +K F + IL+DES Q+TEP ++P+ +G
Sbjct: 1346 KTQREKSDSIYRASIVFSTLSGSGS-ETVKNNFRADIILVDESTQSTEPSSIIPLCIGNI 1404
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPS 747
++LILVGD QL P + ++A GL+ SLFERL VL + L VQYRMHP +S+FPS
Sbjct: 1405 EKLILVGDPLQLPPTIFSTESAENGLNISLFERLSKVLPVE--MLHVQYRMHPTISRFPS 1462
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
N FY L +G ++ +F + P+ FY +E +G S N+ E + V
Sbjct: 1463 NQFYRDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGK-RSLKNKLEITMV 1521
Query: 808 ----EKITTRFIRCGMKPEQIGVITPYEGQRAFLV-QHMQYQGSLPAKIYQEIEVASVDA 862
+K+ + C K G+ITPY+ Q++ + QH Q+ L IE +++D
Sbjct: 1522 FTLIKKLVQDYPEC--KKFSFGIITPYKLQKSEIKEQHKQFNYPL------NIETSTIDG 1573
Query: 863 FQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
FQG EKD+II+SCVRS + IGFL+D RR+NVALTRAK+G+ VIGN K+L K W
Sbjct: 1574 FQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDRTW 1627
Score = 117 (46.2 bits), Expect = 4.5e-46, Sum P(3) = 4.5e-46
Identities = 27/86 (31%), Positives = 50/86 (58%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTG 548
R +P + + +LN SQ +++ ++ + ++LIQGPPGTGKT T ++ L+
Sbjct: 1228 RMAIPSLLRSMCIQELNTSQFNSIETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINP 1287
Query: 549 S-PVLVCAPSNIAVDQLTEKIHRTGL 573
+LVC PS+ +VD++ ++ + L
Sbjct: 1288 EFKILVCGPSHASVDEIAKRCSKKKL 1313
Score = 44 (20.5 bits), Expect = 4.5e-46, Sum P(3) = 4.5e-46
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 28 TQGSEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLNLV 73
TQ SE T+ + + S +S N N N DN+N NL+
Sbjct: 24 TQ-SELSSTNTINNNNNNNNNSNNNSNNNNNNNDDNNDDNNNNNLI 68
Score = 42 (19.8 bits), Expect = 7.2e-46, Sum P(3) = 7.2e-46
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 39 TLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLN 71
+L + +Q++ S +++N N + +NSN N
Sbjct: 19 SLINPTQSELSSTNTINNNNNNNNNSNNNSNNN 51
Score = 37 (18.1 bits), Expect = 2.4e-45, Sum P(3) = 2.4e-45
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 37 DFTLPSQSQTQASQLDSV 54
DF+LP +QT ++ + S+
Sbjct: 257 DFSLPLPNQTVSNYIKSL 274
Score = 37 (18.1 bits), Expect = 2.4e-45, Sum P(3) = 2.4e-45
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 44 SQTQASQLDSVNQIQVNGKQNLDNSNLNL 72
SQT++S+ +S+N K +L +S +++
Sbjct: 201 SQTKSSKKNSINDF----KNHLKSSGISI 225
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 426 (155.0 bits), Expect = 4.5e-46, Sum P(2) = 4.5e-46
Identities = 120/319 (37%), Positives = 171/319 (53%)
Query: 627 KRYRMLKKNAEKSLL----DNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECM 681
K R+ KN EKSL+ ++++VI T GA D L I F ++IDE QA E C
Sbjct: 376 KELRIDLKNREKSLIQQVINDSNVILSTNTGASDSSLKGIDNFDWVVIDECAQALEASCW 435
Query: 682 VPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFRL-EVQYRMH 739
+P+ G K L+L GDH QL P + +AA+ GLS +LFER++ G + RL VQYRM+
Sbjct: 436 IPIQKGNK-LLLAGDHQQLPPTIHSMEAAKMGLSITLFERIIKQYGDQVSRLLNVQYRMN 494
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFP----WPVPDKPMLFYVTQG---QEEIA 792
++ + S FY + L D P P+L T G +E
Sbjct: 495 HKIMDWSSMEFYNSKMIADKSVSNHLLVTGDSPKIRNTLTTTCPLLMIDTSGCDMEESQD 554
Query: 793 GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
G S N E V++ + I CG+KP IGVITPY GQ L ++ +K Y
Sbjct: 555 DEGESKFNNGEVIVVKRHIEKLIECGVKPNDIGVITPYNGQVKLLKSYL-------SKKY 607
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSND---HQGIGFLNDPRRLNVALTRA-KYGIIVIG 908
+E+ +VD FQGREKD+II+S VRSN H+ +GFL + RR NVA+TRA K+ ++V
Sbjct: 608 SSMEIGTVDGFQGREKDVIIISMVRSNTDAPHK-VGFLTEDRRTNVAITRARKHVVVVCD 666
Query: 909 NPKVLSKQPLWNNLLNFYK 927
+ S +PL +++++K
Sbjct: 667 TDTISSHEPL-KRMVDYFK 684
Score = 143 (55.4 bits), Expect = 4.5e-46, Sum P(2) = 4.5e-46
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN+SQ A+ ++ ++ I GPPGTGKT T + QL+K +G VL C PSN++VD
Sbjct: 235 LNQSQKEAILFSLSSNDVACIHGPPGTGKTTTVVEFIVQLIK-SGKKVLACGPSNLSVDN 293
Query: 564 LTEKI 568
+ EK+
Sbjct: 294 MLEKL 298
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 534 (193.0 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 153/452 (33%), Positives = 228/452 (50%)
Query: 492 HLPKHFSAP-NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
+L + + P NLP LN SQ A A+ R L+L+QGPPGTGKT + I+ KQ +
Sbjct: 1764 YLIESINLPTNLP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHKQNSNK 1822
Query: 551 -VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXX 609
+L A SN+A + L E + + ++ VRV A S DS H + ME +
Sbjct: 1823 KILAVADSNVAANNLVEGLKKRNIQAVRVGAGS----DSD-----FHEEAI-MEFHRYKD 1872
Query: 610 XXXXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
+K +++K + +V+ TCVG+G KF ++I
Sbjct: 1873 LLKLRKNNM-------QKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVII 1925
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
DE Q+ EP ++P+ L+L+GDH QL P ++ A + GL +SL ER V+ I P
Sbjct: 1926 DECAQSIEPSNLIPLGHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAP 1985
Query: 730 FRL-EVQYRMHPELSKFPSNFFYEGSLQNG-VCADERKLSKIDFPWPVPDKPMLFY-VTQ 786
L Q RMH + FP+ FY+ L+ V + R + K F WP P + F V+
Sbjct: 1986 VHLLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIK-GFLWPNPKCRLAFIDVSI 2044
Query: 787 GQ--EEIAGS-GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQ 842
G+ + + GTS N E + + I G + ++IG++T Y+ Q+ L + +Q
Sbjct: 2045 GKPGSKFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDEIGILTAYDAQKMKLKKAVQ 2104
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
S A IE+ S+D FQG+EKDLI+ S VRSN + +GFL D RRLNV LTRAK
Sbjct: 2105 DAFSYEAS--HRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKR 2162
Query: 903 GIIVIGNPKVLSKQPL-WNNLLNFYKEQKVLV 933
G+I+ G+ L+ P W L + ++ +V
Sbjct: 2163 GVILFGDQFTLANDPANWLPWLKWISSKRAIV 2194
Score = 37 (18.1 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 37 DFTLPSQSQTQ-ASQLDSVNQIQVNGKQNLDNSNLN 71
DF+ S + + D+ I N N +N+N+N
Sbjct: 946 DFSKMSDDNKRFINSYDNTTIINNNTSNNNNNNNIN 981
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 534 (193.0 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 153/452 (33%), Positives = 228/452 (50%)
Query: 492 HLPKHFSAP-NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
+L + + P NLP LN SQ A A+ R L+L+QGPPGTGKT + I+ KQ +
Sbjct: 1764 YLIESINLPTNLP-LNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHKQNSNK 1822
Query: 551 -VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXX 609
+L A SN+A + L E + + ++ VRV A S DS H + ME +
Sbjct: 1823 KILAVADSNVAANNLVEGLKKRNIQAVRVGAGS----DSD-----FHEEAI-MEFHRYKD 1872
Query: 610 XXXXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI 669
+K +++K + +V+ TCVG+G KF ++I
Sbjct: 1873 LLKLRKNNM-------QKEAKVMKALLFLEAVKKYNVVIATCVGSGHEIFDNEKFERVII 1925
Query: 670 DESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP 729
DE Q+ EP ++P+ L+L+GDH QL P ++ A + GL +SL ER V+ I P
Sbjct: 1926 DECAQSIEPSNLIPLGHYCNNLVLIGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAP 1985
Query: 730 FRL-EVQYRMHPELSKFPSNFFYEGSLQNG-VCADERKLSKIDFPWPVPDKPMLFY-VTQ 786
L Q RMH + FP+ FY+ L+ V + R + K F WP P + F V+
Sbjct: 1986 VHLLNTQRRMHLSICVFPNFHFYDNKLKTANVTEENRPIIK-GFLWPNPKCRLAFIDVSI 2044
Query: 787 GQ--EEIAGS-GTSYVNRTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQ 842
G+ + + GTS N E + + I G + ++IG++T Y+ Q+ L + +Q
Sbjct: 2045 GKPGSKFENAYGTSKFNLYEIEPLITVLKSIINEGCVSVDEIGILTAYDAQKMKLKKAVQ 2104
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKY 902
S A IE+ S+D FQG+EKDLI+ S VRSN + +GFL D RRLNV LTRAK
Sbjct: 2105 DAFSYEAS--HRIEIDSIDGFQGKEKDLILFSAVRSNANNELGFLRDARRLNVMLTRAKR 2162
Query: 903 GIIVIGNPKVLSKQPL-WNNLLNFYKEQKVLV 933
G+I+ G+ L+ P W L + ++ +V
Sbjct: 2163 GVILFGDQFTLANDPANWLPWLKWISSKRAIV 2194
Score = 37 (18.1 bits), Expect = 1.1e-45, Sum P(2) = 1.1e-45
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 37 DFTLPSQSQTQ-ASQLDSVNQIQVNGKQNLDNSNLN 71
DF+ S + + D+ I N N +N+N+N
Sbjct: 946 DFSKMSDDNKRFINSYDNTTIINNNTSNNNNNNNIN 981
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 398 (145.2 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 134/452 (29%), Positives = 214/452 (47%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLT-EKIHRTGLKVV 576
++P L GP + K+V + QL+K +G V P I DQ+ + TG ++
Sbjct: 63 KKPAILYCGP--SNKSVD--IVAEQLLKLSG----VLKPLRIYCDQMEMREFPYTGSEL- 113
Query: 577 RVCAKSR--EAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADE-KRYRMLK 633
++C +S E + + L +R E N S D+ YR L
Sbjct: 114 KLCRRSLRDEKPKEELRDITLMYLVRKPE-NPFSEEIKALEKNL----SVDQIDNYRKLL 168
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVIL-GAKQL 691
K A + ++ DV+ CTC A P L ++ F ILIDE ATEPE +P++ +Q+
Sbjct: 169 KKANQHEIEKYDVVLCTCSSALKPELREVMDFRQILIDECAMATEPEAFIPLVSHNPQQI 228
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
+L+GDH Q+ P+V C G+ +SLFER + L L+ QYRMH E+ FPS+ FY
Sbjct: 229 VLLGDHQQIRPIVQCGHVKNKGMEKSLFERYMDLANM---LDTQYRMHAEICSFPSDEFY 285
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA-----GSGTSYVNRTEASN 806
+G L+ G ER + P + ++ + + G+ S N EA
Sbjct: 286 DGKLKTGA---ERGPCCLLNKSKEPTAMLFGHIEGKEVSLVVSTEKGNENSMANTEEAEQ 342
Query: 807 VEKITTRFIR-CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
+ I+ G+ PE I ++TPY Q V ++ +L K + + V +V QG
Sbjct: 343 AVCVADLLIKQSGVSPEHIAILTPYNAQ----VSEIKM--TLEKKNVRNVTVCTVMKSQG 396
Query: 866 REKDLIIMSCVRS---NDHQG-------------IGFLNDPRRLNVALTRAKYGIIVIGN 909
E +I+S VRS +D Q +GF+ D ++NVA+TRA+ G+ ++GN
Sbjct: 397 SEWPYVIVSTVRSCSTSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGN 456
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLK 941
+L LW+ LL+ Y + +V P ++++
Sbjct: 457 SDLLRCCELWDRLLDHYYRKSCVVN-PASDIR 487
Score = 118 (46.6 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 506 NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
N SQ AVK A+++P ++IQGPPGTGKTV IV+Q K+
Sbjct: 2 NMSQKKAVKEAMKKPFTVIQGPPGTGKTVVGIHIVFQFFKK 42
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 442 (160.7 bits), Expect = 9.7e-45, Sum P(2) = 9.7e-45
Identities = 116/311 (37%), Positives = 173/311 (55%)
Query: 623 SADEKRYRMLKKNAEK--SLLDNADVICCTCVGAGDPRLLKIKFHS--ILIDESMQATEP 678
S + ++ + KN+ + +L+ +A ++ T G+G + + F +LIDES Q++EP
Sbjct: 1284 SPECQKISLKNKNSSRRINLIKSASIVFSTLAGSGSKAIFE-NFSPDIVLIDESTQSSEP 1342
Query: 679 ECMVPVILGA-KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYR 737
++P+ LG+ K+LILVGD QL P + K+ A GL SLFERL I L QYR
Sbjct: 1343 TSIIPLSLGSVKKLILVGDPVQLPPTIFSKQGADCGLKISLFERLAK-SIDVQFLNTQYR 1401
Query: 738 MHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGSGT 796
MHP SKF S FY G+L++G + F + PM F+ + + +++
Sbjct: 1402 MHPVTSKFISEEFYNGTLKDGENVSIDSYNNCKFHFDPSFGPMKFFDLPKSNQKVIKK-- 1459
Query: 797 SYVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
S +N+ E V +++ ++ C K G+ITPY+ Q + ++ Q +
Sbjct: 1460 SIMNQDEIDKVFTLIKELIEKYPEC--KKLSFGIITPYKLQ----MNQIKEQLNRSEHHN 1513
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
I V+++D QG EKD+IIMSCVRS + GIGFL+D RR+NVALTRAK G+ VIG KV
Sbjct: 1514 LNISVSTIDGVQGSEKDIIIMSCVRSIEKFGIGFLSDRRRINVALTRAKLGLYVIGTYKV 1573
Query: 913 LSKQPLWNNLL 923
L+K W L
Sbjct: 1574 LAKDNTWEKFL 1584
Score = 121 (47.7 bits), Expect = 9.7e-45, Sum P(2) = 9.7e-45
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 505 LNRSQVYAVKHA-IQRPLSLIQGPPGTGKTVTSATIVYQLVK-QTGSPVLVCAPSNIAVD 562
LN SQ+ A+K + ++ ++LIQGPPGTGKT T ++ L+ +LVC PS+ +VD
Sbjct: 1193 LNESQLNAIKSSLVESGITLIQGPPGTGKTTTINYLLSVLLAIDKKFKILVCGPSHASVD 1252
Query: 563 QLTEK 567
++ ++
Sbjct: 1253 EVAKR 1257
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 450 (163.5 bits), Expect = 2.2e-44, Sum P(4) = 2.2e-44
Identities = 115/291 (39%), Positives = 169/291 (58%)
Query: 638 KSLLDNADVICCT--CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG-AKQLILV 694
K ++ NA+++ T G+G R K + +L+DES Q++EP ++P+ +G ++LILV
Sbjct: 1504 KEIIRNANIVFSTLSASGSGSVRS-NFKANIVLVDESTQSSEPASLIPLCIGNIEKLILV 1562
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFFYEG 753
GD QL P + +A GL+ SLFERL VL + L QYRMHP +S+FPSN FY+
Sbjct: 1563 GDPLQLPPTIFSSGSAENGLNISLFERLSKVLPVE--MLNTQYRMHPTISRFPSNQFYKD 1620
Query: 754 SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV----EK 809
L +G ++ +F + P+ FY +E +G S N+ E + V +K
Sbjct: 1621 RLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGK-RSLKNKLEITMVFTLIKK 1679
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLV-QHMQYQGSLPAKIYQEIEVASVDAFQGREK 868
+ + C K G+ITPY+ Q++ + QH Q+ L IE +++D QG EK
Sbjct: 1680 LVQDYPEC--KKFSFGIITPYKLQKSEIKEQHKQFNYPL------NIETSTIDGVQGSEK 1731
Query: 869 DLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
D+II+SCVRS + IGFL+D RR+NVALTRAK+G+ VIGN K+L K W
Sbjct: 1732 DIIILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGNSKLLKKDRTW 1779
Score = 126 (49.4 bits), Expect = 2.2e-44, Sum P(4) = 2.2e-44
Identities = 36/125 (28%), Positives = 66/125 (52%)
Query: 451 STSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQV 510
ST+F R A +F ++ + L +N+ + R +P + + +LN SQ
Sbjct: 1342 STTFIRELEATEEFKNSKTLLNQILQPSLEVYNLMTSM-RMEIPSLLRSICIQELNASQF 1400
Query: 511 YAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGS-PVLVCAPSNIAVDQLTEKI 568
A++ ++ + ++LIQGPPGTGKT T ++ L+ +LVC PS+ +VD++ ++
Sbjct: 1401 NAIETSLSKKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHASVDEVAKRC 1460
Query: 569 HRTGL 573
+ L
Sbjct: 1461 LKKSL 1465
Score = 59 (25.8 bits), Expect = 8.8e-38, Sum P(3) = 8.8e-38
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 453 SFDRMQLALRKFAVDDQSVSA----YIYHRLLGHNVDEVL---FRCHLPKHF 497
SF +L L+K DD S++A +Y +L N+ L F+C+ P F
Sbjct: 197 SFLYQRLILKKLFTDDTSITADQKQRLYDQLSAQNITITLSEVFKCNYPSKF 248
Score = 43 (20.2 bits), Expect = 2.2e-44, Sum P(4) = 2.2e-44
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 269 HQVLLRYEDGYQYQNIFGPLV------KLEADYDKRLKESQTQENVTVRWDVGLNK 318
H + Y D ++ N+ PL+ +LE D+D+ S ++++ T+ +GL++
Sbjct: 1178 HSLQDSYSDQSEFVNLMKPLIVEEYRAQLEGDFDEIEGISISEQDGTL---IGLDR 1230
Score = 41 (19.5 bits), Expect = 2.2e-44, Sum P(4) = 2.2e-44
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 36 TDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLN 71
T T + + T S ++++N++ + + NSN N
Sbjct: 59 TTTTNTNTNSTMDSIINNMNKLNITENSQIINSNEN 94
Score = 40 (19.1 bits), Expect = 4.4e-44, Sum P(4) = 4.4e-44
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 270 QVLLRYEDGYQ---YQNIFGPLVKLEADYDKRLKESQTQENVTV 310
++++ + YQ + +F + AD +RL + + +N+T+
Sbjct: 191 KIMIEFSFLYQRLILKKLFTDDTSITADQKQRLYDQLSAQNITI 234
Score = 39 (18.8 bits), Expect = 5.6e-44, Sum P(4) = 5.6e-44
Identities = 12/64 (18%), Positives = 26/64 (40%)
Query: 337 QNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDEL 396
+ +F + AD +RL + + +N+T+ + F D +++G
Sbjct: 206 KKLFTDDTSITADQKQRLYDQLSAQNITITLSEVFKCNYPSKFRQISNDFKF-ILKGKNY 264
Query: 397 KLRY 400
K+ Y
Sbjct: 265 KINY 268
Score = 37 (18.1 bits), Expect = 5.6e-44, Sum P(4) = 5.6e-44
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 37 DFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLNLVS 74
D LP + +T++ ++ + I+ K +++ S N ++
Sbjct: 677 DIVLPFKKKTESYRIGTSKDIRKLLKSSVNPSKFNEIN 714
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 360 (131.8 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 107/289 (37%), Positives = 153/289 (52%)
Query: 664 FHSILIDESMQATEPECMVPVILGAKQ---LILVGDHCQLGPVVMCK--KAARAGLSQSL 718
F +++IDE QA EP+C +P+I Q L+L GD+ QL P + + K L +L
Sbjct: 389 FDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTL 448
Query: 719 FERLVVLGIRPFR-----LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
F+R++ I P R L VQYRM+ ++ +FPS+ Y G L R L ID P
Sbjct: 449 FDRIIK--IFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADATVANRLL--IDLPT 504
Query: 774 ----PVPDK-----PMLFYVTQGQE--EIAGSGT---SYVNRTEASNVEKITTRFIRCGM 819
P D P+++Y TQG E E A T S N E + V++ +
Sbjct: 505 VDATPSEDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNV 564
Query: 820 KPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN 879
IGVI+PY Q V H++ K+ +IE+++VD FQGREKD+II+S VRSN
Sbjct: 565 PENSIGVISPYNAQ----VSHLKKLIHDELKL-TDIEISTVDGFQGREKDVIILSLVRSN 619
Query: 880 DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
+ +GFL + RRLNVA+TR + ++V+GN +VL Q N L + E
Sbjct: 620 EKFEVGFLKEERRLNVAMTRPRRQLVVVGNIEVL--QRCGNKYLKSWSE 666
Score = 187 (70.9 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 53/166 (31%), Positives = 89/166 (53%)
Query: 412 GHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTS---FDRMQLALRKFAVDD 468
G V K+ D ++ + L+ S +S +I K+T+ ++RM+ +RK +
Sbjct: 117 GVVYKMSDT---QITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLS--- 170
Query: 469 QSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL-----PDLNRSQVYAVKHAIQRPLSL 523
+S+ I +++ + V+E R +P S N+ P+LN SQ A+ AI L++
Sbjct: 171 -EISSPIQDKIIQYLVNE---RPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAINNDLTI 226
Query: 524 IQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLTEKI 568
I GPPGTGKT T ++ QL +K +L+C PSNI+VD + E++
Sbjct: 227 IHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISVDTILERL 272
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 460 (167.0 bits), Expect = 3.5e-44, Sum P(4) = 3.5e-44
Identities = 119/307 (38%), Positives = 175/307 (57%)
Query: 623 SADEKRYRMLKKNA--EKSLLDNADVICCTCVGAGD-PRLLKIKFHSILIDESMQATEPE 679
S D R + K K+++ NA +I T +G P K + +L+DES Q++EP
Sbjct: 1686 SPDCHRISLFDKTPAQRKAIIRNATIIFATLSASGSKPIRSNFKANIVLVDESTQSSEPA 1745
Query: 680 CMVPVILG-AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYR 737
++P+ +G ++LILVGD QL P + ++A+ GL+ SLFERL VL + L QYR
Sbjct: 1746 SLIPLCIGNIEKLILVGDPLQLPPTIFSSESAKNGLNISLFERLSKVLPVE--MLNTQYR 1803
Query: 738 MHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTS 797
MHP +S+FPSN FY+ L +G ++ +F + P+ FY +E +G S
Sbjct: 1804 MHPTISRFPSNQFYKDRLLDGDNVKSLVYNQHNFHSDIKYGPIRFYDVIDSKEESGK-RS 1862
Query: 798 YVNRTEASNV----EKITTRFIRCGMKPEQIGVITPYEGQRAFLV-QHMQYQGSLPAKIY 852
N+ E + V +K+ + C K G+ITPY+ Q++ + QH Q+ L
Sbjct: 1863 LKNKLEITMVFTLIKKLVQDYPEC--KKFSFGIITPYKLQKSEIKEQHKQFNYPL----- 1915
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
IE +++D QG EKD+II+SCVRS + IGFL+D RR+NVALTRAK+G+ VIGN K+
Sbjct: 1916 -NIETSTIDGVQGSEKDIIILSCVRS---ERIGFLSDRRRINVALTRAKFGLFVIGNSKL 1971
Query: 913 LSKQPLW 919
L K W
Sbjct: 1972 LKKDRTW 1978
Score = 122 (48.0 bits), Expect = 3.5e-44, Sum P(4) = 3.5e-44
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 490 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTG 548
R +P + + +LN SQ AV+ ++ + ++LIQGPPGTGKT T ++ L+
Sbjct: 1579 RMEIPSLLRSMCIQELNTSQFSAVETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINP 1638
Query: 549 S-PVLVCAPSNIAVDQLTEKIHRTGL 573
+LVC PS+ +VD++ ++ + L
Sbjct: 1639 KFKILVCGPSHASVDEVAKRCLKKSL 1664
Score = 47 (21.6 bits), Expect = 4.4e-37, Sum P(3) = 4.4e-37
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 453 SFDRMQLALRKFAVDDQSVSA----YIYHRLLGHN----VDEVLFRCHLPKHFSAPNLPD 504
SF +L L+K D+S++A +Y +L N + EV F+C+ P F + D
Sbjct: 333 SFLYQRLILKKLFTGDKSITADEKQKLYDQLSAQNRTITLPEV-FKCNNPPSFHQIS-ND 390
Query: 505 LN---RSQVYAVKH 515
N + + Y +K+
Sbjct: 391 FNFVLKGKYYRIKN 404
Score = 40 (19.1 bits), Expect = 3.5e-44, Sum P(4) = 3.5e-44
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 276 EDGYQYQ-NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFS 325
E Q+ NI G +L+ D+ K K + + +N+ ++ L+ + F+
Sbjct: 1165 ESKIQFNTNINGIKHRLKTDFSKIQKNNTSNQNIEKIYNKSLSLMVLLEFN 1215
Score = 39 (18.8 bits), Expect = 4.4e-44, Sum P(4) = 4.4e-44
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 338 NIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFS 380
NI G +L+ D+ K K + + +N+ ++ L+ + F+
Sbjct: 1173 NINGIKHRLKTDFSKIQKNNTSNQNIEKIYNKSLSLMVLLEFN 1215
Score = 39 (18.8 bits), Expect = 4.4e-44, Sum P(4) = 4.4e-44
Identities = 13/56 (23%), Positives = 30/56 (53%)
Query: 269 HQVLLRYEDGYQYQNIFGPLV------KLEADYDKRLKESQTQENVTVRWDVGLNK 318
H + Y D ++ N+ PL+ +LE D+++ S ++++ T+ +GL++
Sbjct: 1378 HSLQDSYSDQSEFVNLMKPLIVEEYRAQLEGDFNEIEGVSISEQDGTL---IGLDR 1430
Score = 37 (18.1 bits), Expect = 3.5e-44, Sum P(4) = 3.5e-44
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 52 DSVNQIQVNGKQNLDNSNLN 71
D +N +N N +N+N N
Sbjct: 295 DLLNNNNINPNNNYNNNNNN 314
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 388 (141.6 bits), Expect = 8.7e-44, Sum P(2) = 8.7e-44
Identities = 108/279 (38%), Positives = 150/279 (53%)
Query: 664 FHSILIDESMQATEPECMVPV---ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 720
F IL+DE+ QA+EPE M+ V L ++L GD QLGPV+ + A GL +S E
Sbjct: 539 FTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLE 598
Query: 721 RLVVL-----GIRPF--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
RL G + +L YR HPE+ PS FY+G L + L+ ++F
Sbjct: 599 RLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNF-L 657
Query: 774 PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR--CGMKPEQIGVITPYE 831
P + PM+FY QG +E G+ S+ NR E S V + R C ++ E IGVITPY
Sbjct: 658 PNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDC-VQEEDIGVITPYR 716
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN-DHQG------I 884
Q M+ + L E++V SV+ FQG+EK +II+S VRS H +
Sbjct: 717 QQV------MKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCL 770
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
GFL++PRR NVA+TRA +++IGNP ++ K WN LL
Sbjct: 771 GFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLL 809
Score = 161 (61.7 bits), Expect = 8.7e-44, Sum P(2) = 8.7e-44
Identities = 67/234 (28%), Positives = 113/234 (48%)
Query: 348 ADYDKRL---KESQTQENVTVRWD---VGLNKKSIAYFSLAKTD-GDMR--LMQGDELKL 398
A+Y K L +E Q +E++ +D V + ++ I Y SL + R L+ GD + +
Sbjct: 246 ANYYKTLLIMEELQLEEDMRA-YDMENVSMKRRGI-YLSLEVPGLAERRPSLVHGDFIFV 303
Query: 399 RYSYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQ 458
R++YD + G V ++ DEV ++ S A + ++V F + + R+
Sbjct: 304 RHAYDDGTDHAYQGFVHRVE---ADEVHMKFASEFHQRHTAGSVYNVRFTYNRINTRRLY 360
Query: 459 LALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ 518
A+ + D + +++ L H+ ++ K F P P LN Q+ +++ +
Sbjct: 361 QAVDAAEMLDPN---FLFPSL--HSGKRMI----KTKPF-VPISPALNAEQICSIEMVLG 410
Query: 519 ---RPLSLIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIAVDQLTEKI 568
P +I GPPGTGKT+T + QL Q + VLVCAPSN A D + EK+
Sbjct: 411 CKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKL 464
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 420 (152.9 bits), Expect = 5.6e-43, Sum P(2) = 5.6e-43
Identities = 109/302 (36%), Positives = 168/302 (55%)
Query: 631 MLK-KNAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVIL-G 687
ML+ ++ K L NAD+I CT GA + + + +++DE+ Q E E + + L G
Sbjct: 329 MLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPG 388
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
+ IL+GD QL +V + +A +SLFERLV+LG L+VQYRMHP +S+FP+
Sbjct: 389 LRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPN 448
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
FY G +++ E K + D V +G+EE G G S N E + +
Sbjct: 449 KEFYGGRIKDAENVKESIYQKRFLKGNMFDSFSFINVGRGKEEF-GDGHSPKNMVEVAVI 507
Query: 808 EKITTRF--IRCGMKPE-QIGVITPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
+I + + C + + +GV++PY+GQ RA + SL + + + V SVD F
Sbjct: 508 SEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFT-LNVRSVDGF 566
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNL 922
QG E+D+II+S VRSN + +GFLN+ +R NVALTRA++ + VIGN L+ +W L
Sbjct: 567 QGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATL 626
Query: 923 LN 924
++
Sbjct: 627 IS 628
Score = 108 (43.1 bits), Expect = 5.6e-43, Sum P(2) = 5.6e-43
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
+ LI GPP TGKT T AT+++ L+K V VCAP+N A+ Q+T ++
Sbjct: 81 VKLIWGPPRTGKTKTVATLLFALLKLRCKTV-VCAPTNTAIVQVTSRL 127
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 445 (161.7 bits), Expect = 7.2e-43, Sum P(4) = 7.2e-43
Identities = 112/309 (36%), Positives = 174/309 (56%)
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRLLKIK--FHSILIDESMQATEPECMVPVILGAKQ 690
+ + E S + A+++ T +G ++ F ++IDE+ QA+E + P+ LGA +
Sbjct: 742 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAAR 801
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
+LVGD QL V+ K A S+SLFER + G L VQYRMHP++ FPS +F
Sbjct: 802 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYF 861
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS---N 806
Y+G L++ +I + PV +P LF+ ++ G+E G SY N EA
Sbjct: 862 YQGRLKDSESISSAP-DEIYYKDPVL-RPYLFFNISHGRESHRGGSVSYENVDEARFCVG 919
Query: 807 VEKITTRFIRC-GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
V + ++ G +GVITPY+ Q L +H ++ +L +EI + +VDAFQG
Sbjct: 920 VYMHLQKTLKSLGAGKVSVGVITPYKLQLKCL-KH-EFGNALGQDELKEIYINTVDAFQG 977
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
+E+D+IIMSCVR++ H G+GF++D RR+NVALTRA+ + V+GN L K W L++
Sbjct: 978 QERDVIIMSCVRASGH-GVGFVSDIRRMNVALTRARRALWVMGNASALMKSEDWAALISD 1036
Query: 926 YKEQKVLVE 934
+ + +E
Sbjct: 1037 ARGRNCFME 1045
Score = 81 (33.6 bits), Expect = 7.2e-43, Sum P(4) = 7.2e-43
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 492 HLPKHFSAPNLPDLNRSQVYA-------VKHAIQRPLSLIQGPPGTGKTVT 535
HL + F+AP L ++ + ++ VK P +L+QGPPGTGKT T
Sbjct: 461 HLHRSFNAPQLAAIHWAAMHTAAGTSSGVKKQEPWPFTLVQGPPGTGKTHT 511
Score = 60 (26.2 bits), Expect = 7.2e-43, Sum P(4) = 7.2e-43
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 543 LVKQTGSP-VLVCAPSNIAVDQLTEKI 568
L K P +LVCAPSN A D+L ++
Sbjct: 572 LPKLCAKPRMLVCAPSNAATDELLSRV 598
Score = 39 (18.8 bits), Expect = 7.2e-43, Sum P(4) = 7.2e-43
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 328 KTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 367
KT+ +G Y + G +L D + + T + W
Sbjct: 153 KTESNGESYSGLLGKPRRLNRDEEPSAEGMGTSVSRQASW 192
Score = 37 (18.1 bits), Expect = 1.2e-42, Sum P(4) = 1.2e-42
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 253 EATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLV 289
E T + + D + V R+E +Y +F PL+
Sbjct: 239 EVTNEKFWRHPEDTELRSVPERFESMEEYVRVFEPLL 275
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 434 (157.8 bits), Expect = 1.2e-42, Sum P(4) = 1.2e-42
Identities = 118/324 (36%), Positives = 182/324 (56%)
Query: 637 EKSLLDNADVICCTCVGAGDPRLLKIKF--HSILIDESMQATEPECMVPVILGAK---QL 691
+K +L+++ IC + + A L++ F + +++DE+ Q+ E C++P+ LGAK +L
Sbjct: 3665 KKMILEHSS-ICFSTLSASGSNLVQSSFKPNVVIVDEATQSCETSCIIPLSLGAKSMKKL 3723
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-VLGIRPFRLEVQYRMHPELSKFPSNFF 750
ILVGD QL P + K++ GL SLFERL VL + L VQYRMHP +SKFPS+ F
Sbjct: 3724 ILVGDPVQLPPTIFSKESIHCGLGISLFERLSKVLPVS--MLNVQYRMHPLISKFPSSQF 3781
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEASNVEK 809
Y L++G + F + F+ VT +EE G TS N+ E + V
Sbjct: 3782 YHDILKDGDNVVSSDAYSLRFHENQDYGAIRFFDVTDSREE-RGK-TSIKNQLEITMVFT 3839
Query: 810 ITTRFIRCGMKPEQ--IGVITPYEGQRAFLVQ-HMQYQGSLPAKIYQEIEVASVDAFQGR 866
+ + + + +Q G++TPY+ QR + + Q SL IE+ ++D+FQG
Sbjct: 3840 LIKKLTQDHPETKQYSFGIVTPYKLQRKEIEDAYKQLNLSL------NIEIKTIDSFQGS 3893
Query: 867 EKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN-F 925
EKD++IMSCVR+ + IGFL+D RR+NV++TRAKYG+ +IGN +L W L++
Sbjct: 3894 EKDIMIMSCVRN---ESIGFLSDRRRINVSITRAKYGLFIIGNATLLKLDRTWGELIDHL 3950
Query: 926 YKEQKV--LVEGPLNNLKESLILF 947
+V + + NL+E I F
Sbjct: 3951 ISIDRVYSINSNDIENLREQTIQF 3974
Score = 127 (49.8 bits), Expect = 1.2e-42, Sum P(4) = 1.2e-42
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 505 LNRSQVYAVKHA-IQRPLSLIQGPPGTGKTVTSATIVYQLVK-QTGSPVLVCAPSNIAVD 562
LN SQ+ A+ + + ++LIQGPPGTGKT T +++ ++ +LVC PS+ AVD
Sbjct: 3556 LNESQLAAINESLVHSSITLIQGPPGTGKTHTITSLISIILAINPDFKILVCGPSHAAVD 3615
Query: 563 QLTEKIHRTGL 573
++ +++ GL
Sbjct: 3616 EVAKRVIIKGL 3626
Score = 52 (23.4 bits), Expect = 1.2e-42, Sum P(4) = 1.2e-42
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 435 APTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
A + DFI+ + D+ ++ +R F + D+S+S +I H
Sbjct: 2154 ATVDTNVNLIKDFIFSGLN-DK-KIVIRNFKIYDESLSIFINH 2194
Score = 45 (20.9 bits), Expect = 1.2e-42, Sum P(4) = 1.2e-42
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 206 EQWKPLIADRSFLSWLVKVPTEQEQQRGRQVTSAQIAKLEEVWKD-NAEATFQDLEKPGV 264
+Q + ++ + S+L +P Q+QQ+ + + I L+ ++K N + LE+ +
Sbjct: 402 QQPQEILYTQQIPSFLDSIPMVQQQQQNQTIDFG-IEILKNIFKSANQIKLYTSLEET-I 459
Query: 265 DEDPHQVLLR 274
D P LR
Sbjct: 460 DAFPQIKQLR 469
Score = 41 (19.5 bits), Expect = 1.1e-40, Sum P(5) = 1.1e-40
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGY 334
+ K+ + + N V + N++ A F+LA+T GY
Sbjct: 3413 KTKDEEIKINDLVLFK-SFNEEGRAIFALARTVNHGY 3448
Score = 40 (19.1 bits), Expect = 4.0e-42, Sum P(4) = 4.0e-42
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 31 SEFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLN 71
SEFD D S + + ++ N N N +N+N N
Sbjct: 1884 SEFDDNDSISSSNNIINNNNNNNNNNNNNNNNNNNNNNNNN 1924
Score = 39 (18.8 bits), Expect = 5.0e-42, Sum P(4) = 5.0e-42
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 30 GSEFDFTDF-TLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLN 71
GS +F T+ S+S + + + + ++ N+ N+N N
Sbjct: 1862 GSNLRLKNFITITSESNNKQNYSEFDDNDSISSSNNIINNNNN 1904
Score = 39 (18.8 bits), Expect = 1.1e-40, Sum P(5) = 1.1e-40
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 275 YEDGYQYQNIFGPLVKLEADYDKRLK 300
YE+ +Y+N F P+ L ++ K L+
Sbjct: 3339 YENHMEYKNSFKPI--LVEEFRKTLE 3362
Score = 38 (18.4 bits), Expect = 3.4e-41, Sum P(4) = 3.4e-41
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 430 KSSAGAPTEAT--TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV 484
K++ PT T V I +S SF+ + L ++K+ D S S + L N+
Sbjct: 2689 KTNISIPTLTLPKTHEDVSLISRS-SFNEIYLLIKKYQNDYSSYSILSRNSLNRENI 2744
Score = 37 (18.1 bits), Expect = 8.1e-42, Sum P(4) = 8.1e-42
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 36 TDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSN 69
T T PSQ Q S L S++ + K +LD+ N
Sbjct: 1972 TTTTTPSQISNQ-SLLSSIS---LKTKLSLDHEN 2001
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 482 (174.7 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 135/423 (31%), Positives = 212/423 (50%)
Query: 520 PLSLIQGPPGTGKTVTSATIVYQLVK--------QTGS--P--VLVCAPSNIAVDQLTEK 567
P+++I G G GK+ A ++ LV+ G P +L+ + +N+AVD++
Sbjct: 465 PITVIHGVFGAGKSYLLAVVILFLVELFEKCDSEAVGRARPWKLLISSSTNVAVDRVLLG 524
Query: 568 IHRTGL-KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADE 626
+ G K +RV S I PV +LH N
Sbjct: 525 LLSLGFEKFIRV--GSVRKIAKPVLPYSLHASSDNESEQLKELHALMREELTPIERVYVR 582
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI- 685
K K + LL A V+ TC P + +KF +++DE Q TEP ++P+
Sbjct: 583 KSIEQHKLGTNRVLLKQARVVGITCAACPFPCMNDLKFPVVVLDECSQMTEPASLLPIAR 642
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
++LILVGD QL P + AA GL Q+LF+RL ++G +P +L QYR HP +S
Sbjct: 643 FECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCLMGHKPIQLRTQYRCHPVISA 702
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEA 804
++ FYEG+L NG+ ER+ S + W +P + FY G E++ S+VN EA
Sbjct: 703 IANDLFYEGNLVNGI--SERERSPV-LEW-LPT--LCFYNVTGTEQVEREN-SFVNVAEA 755
Query: 805 SNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
+ K+ I G++ IGVIT Y+ Q + + + + + +EV++VDAFQ
Sbjct: 756 AFTLKLIRSLIASGLEGSMIGVITLYKSQM-YKICSLLSAVDVDHPDVKAVEVSTVDAFQ 814
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
G EK++II+SCVR+ +GF++ +R+NVALTR + +++IG+ L K LW ++
Sbjct: 815 GAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIIGSLSCLRKNQLWGRVIQ 871
Query: 925 FYK 927
K
Sbjct: 872 HCK 874
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 443 (161.0 bits), Expect = 2.6e-42, Sum P(4) = 2.6e-42
Identities = 115/309 (37%), Positives = 170/309 (55%)
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRLLKIK--FHSILIDESMQATEPECMVPVILGAKQ 690
+ + E S + A+++ T +G ++ F ++IDE+ QA+E + P+ LGA +
Sbjct: 905 RASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVGVLPPLALGAAR 964
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
+LVGD QL V+ K A S+SLFER + G L VQYRMHP++ FPS +F
Sbjct: 965 CVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTLLLTVQYRMHPQIRDFPSRYF 1024
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEAS---N 806
Y+G L + +I + V KP LF+ ++ G+E G SY N EA
Sbjct: 1025 YQGRLTDSESVSTAP-DEIYYKDSVL-KPYLFFDISHGRESHRGGSVSYENIDEARFCVG 1082
Query: 807 VEKITTRFIRC-GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQG 865
V R ++ G +GVITPY+ Q L +++ +L QEI + +VDAFQG
Sbjct: 1083 VYLHLQRTLKSLGGGKVSVGVITPYKLQLKCL--KIEFGNALSQDELQEIYINTVDAFQG 1140
Query: 866 REKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
+E+D+IIMSCVR+++H G+GF+ D RR+NVALTRAK + V+GN L K W L+
Sbjct: 1141 QERDVIIMSCVRASNH-GVGFVADIRRMNVALTRAKRALWVMGNASALMKCEDWAALITD 1199
Query: 926 YKEQKVLVE 934
K + +E
Sbjct: 1200 AKARNCFME 1208
Score = 84 (34.6 bits), Expect = 2.6e-42, Sum P(4) = 2.6e-42
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 489 FRCHLPKHFSAPNLPDLNRSQVYAV---KHAIQR----PLSLIQGPPGTGKTVT 535
F HL + F+AP L ++ + ++ ++R P +L+QGPPGTGKT T
Sbjct: 622 FAGHLHRSFNAPQLAAIHWAAMHTAAGTSSGVKRQDPWPFTLVQGPPGTGKTHT 675
Score = 60 (26.2 bits), Expect = 2.6e-42, Sum P(4) = 2.6e-42
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 543 LVKQTGSP-VLVCAPSNIAVDQLTEKI 568
L K P +LVCAPSN A D+L ++
Sbjct: 735 LPKLCAKPRMLVCAPSNAATDELLSRV 761
Score = 39 (18.8 bits), Expect = 2.6e-42, Sum P(4) = 2.6e-42
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLV 289
D D V R+E +Y +F PL+
Sbjct: 415 DTDLQSVPERFESMDEYVRVFEPLL 439
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 479 (173.7 bits), Expect = 2.8e-42, P = 2.8e-42
Identities = 140/435 (32%), Positives = 217/435 (49%)
Query: 506 NRSQVYAVKH-AIQR-PLSLIQGPPGTGKTVTSATIVY---QLVKQ-----TGS--P--V 551
+R V K AI P+++I G G GK+ A ++ QL ++ G+ P +
Sbjct: 455 SRQSVEEAKELAIHTLPITIIHGVFGAGKSYLLAVVILFFVQLFEKCEALTVGNARPWKL 514
Query: 552 LVCAPSNIAVDQLTEKIHRTGL-KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXX 610
L+ + +N+AVD++ + G K VRV S I PV +L+ N
Sbjct: 515 LISSSTNVAVDRVLLGLLSLGFEKFVRV--GSVRKIAKPVLPYSLYAGSENENEQLKELH 572
Query: 611 XXXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILID 670
K K K+LL V+ TC P + +KF +++D
Sbjct: 573 ALMKEDLTPVERVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLD 632
Query: 671 ESMQATEPECMVPVI-LGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIR 728
E Q TEP ++P+ ++LILVGD QL P + AA GL Q+LF+RL ++G +
Sbjct: 633 ECSQMTEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHK 692
Query: 729 PFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQ 788
P L QYR HP +S ++ FYEG+L NG+ ER S + W +P + FY +G
Sbjct: 693 PILLRTQYRCHPTISAIANDLFYEGNLMNGISETER--SPL-LEW-LPT--LCFYNVKGL 746
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP 848
E+I G S+ N EA+ K+ I G+ IGVIT Y+ Q + + H+
Sbjct: 747 EQIE-RGNSFHNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQM-YKLCHLLSAMDFD 804
Query: 849 AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
+ ++V++VDAFQG EK++II+SCVR+ +GF++ +R+NVALTR + ++++G
Sbjct: 805 HPNLKAVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVG 861
Query: 909 NPKVLSKQPLWNNLL 923
N L K LW ++
Sbjct: 862 NLACLRKNRLWGRVI 876
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 405 (147.6 bits), Expect = 7.9e-42, Sum P(2) = 7.9e-42
Identities = 111/302 (36%), Positives = 161/302 (53%)
Query: 631 MLKKNAEKSL-LDNADVICCTCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-G 687
ML+ N K+ L NAD+I CT GA D ++ +L+ DE+ Q E E + + L G
Sbjct: 350 MLENNDTKTFCLQNADIIFCTASGAADMNPIRTGSVDLLVVDEAAQLKECESVAALQLSG 409
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
+ +L+GD QL P M A+ G +SLFERLV+LG L VQYRMHP +S+FP+
Sbjct: 410 LRHAVLIGDELQL-PA-MVHNEAKFG--RSLFERLVLLGHNKHLLNVQYRMHPSISRFPN 465
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
FY G +++ E K + V +G+EE G G S N E + +
Sbjct: 466 KEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVGRGEEEF-GDGHSPKNMVEVAVI 524
Query: 808 EKITTRFIRCGMKPE---QIGVITPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
+I + + + +GV++PY+GQ RA + SL + V SVD F
Sbjct: 525 SEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLF--TLNVRSVDGF 582
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNL 922
QG E+D+II+S VRSN + +GFLN+ +R NVALTRA++ + VIGN L+ W L
Sbjct: 583 QGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSSWAKL 642
Query: 923 LN 924
++
Sbjct: 643 IS 644
Score = 115 (45.5 bits), Expect = 7.9e-42, Sum P(2) = 7.9e-42
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
KH+++ LI GPPGTGKT T AT+++ L+K + V VCAP+N A+ ++T ++
Sbjct: 94 KHSVK----LIWGPPGTGKTKTVATLLFCLLKLSCKTV-VCAPTNTAIVEVTSRL 143
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 474 (171.9 bits), Expect = 9.9e-42, P = 9.9e-42
Identities = 131/419 (31%), Positives = 210/419 (50%)
Query: 520 PLSLIQGPPGTGKTVTSATIVY---QLVKQTGSP---------VLVCAPSNIAVDQLTEK 567
P+++I G G GK+ A ++ QL +++ +P +L+ + +N+AVD++
Sbjct: 470 PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTIGNARPWKLLISSSTNVAVDRVLLG 529
Query: 568 IHRTGLK-VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADE 626
+ G + +RV S I P+ +LH N
Sbjct: 530 LLSLGFENFIRV--GSVRKIAKPILPYSLHAGSENESEQLKELHALMKEDLTPTERVYVR 587
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI- 685
K K ++LL V+ TC P + +KF +++DE Q TEP ++P+
Sbjct: 588 KSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPASLLPIAR 647
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
++LILVGD QL P + AA GL Q+LF+RL ++G +P L QYR HP +S
Sbjct: 648 FECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAISA 707
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEA 804
++ FY+G+L NGV ER S + W +P + FY +G E+I S+ N EA
Sbjct: 708 IANDLFYKGALMNGVTEIER--SPL-LEW-LPT--LCFYNVKGLEQIERDN-SFHNVAEA 760
Query: 805 SNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
+ K+ I G+ IGVIT Y+ Q + + H+ + ++V++VDAFQ
Sbjct: 761 TFTLKLIQSLIASGIAGSMIGVITLYKSQM-YKLCHLLSAVDFHHPDIKTVQVSTVDAFQ 819
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
G EK++II+SCVR+ +GF++ +R+NVALTR K ++++GN L K LW ++
Sbjct: 820 GAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNQLWGRVI 875
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 391 (142.7 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 112/372 (30%), Positives = 176/372 (47%)
Query: 581 KSREAIDSP-VSFLALHNQIR---NMEMNSXXXXXXXXXXXXXXXSSADEKRYRMLKKNA 636
KSR+ P + + LH++IR N + D + Y+ L +A
Sbjct: 2402 KSRQERSKPELRAITLHHRIRMGHNPYSQRITDFDDRIKSDPYSLTDTDIEEYKKLLNDA 2461
Query: 637 EKSLLDNADVICCTCVGAGDPRLLK-IKFHSILIDESMQATEPECMVPVI-LGAKQLILV 694
L+ D+I CTC A P L K + ILIDE ATEP+ +VP++ ++++L+
Sbjct: 2462 RLHELERHDIILCTCTAAASPNLKKTLSARQILIDECAMATEPQTLVPLVSFKPEKVVLL 2521
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
GDH QL P+V R G+++SLFER + R L+ QYRMH E+ KFPS +Y
Sbjct: 2522 GDHKQLRPIVKNNHVRRLGMTRSLFERYMD---RAIMLDTQYRMHEEICKFPSEAYYNDM 2578
Query: 755 LQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE------EIAGSGTSYVNRTEASNVE 808
L+ V + + + K +LF +G+E G+ S N E
Sbjct: 2579 LKT-VVRERTSVLNAETEGRRQSKRILFGDIRGEEIGLVVSTARGNENSKANFDEVKKAV 2637
Query: 809 KITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
+I + + G ++PE I +++PY Q A + + + K + V ++ QG E
Sbjct: 2638 EICIQLVTVGRVRPEDIAILSPYNAQVAQIRERLS---DFELKGFT---VTTITKSQGSE 2691
Query: 868 KDLIIMSCVRS--NDH-----------QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
+I+S VRS +D + IGF+ D ++NV +TRA+ G+ ++GN VL+
Sbjct: 2692 WQYVILSIVRSCPSDEIEPMPSREWLSKHIGFVGDENQINVGITRAQVGLCILGNQAVLN 2751
Query: 915 KQPLWNNLLNFY 926
P W LL Y
Sbjct: 2752 CSPAWQKLLKHY 2763
Score = 164 (62.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 79/282 (28%), Positives = 138/282 (48%)
Query: 658 RLLKIKFHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMC---KKAARA 712
+L K F ILIDE+ Q E E ++ + L K +++L GDH Q+ P + K +
Sbjct: 675 KLPKGFFTHILIDEASQMLEGEALMALGLADKHTRVVLAGDHMQMAPKLFSVTDDKRSEH 734
Query: 713 GLSQSLFERLVVLGI---RPFRL--EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
L LF I + R+ YR E+ F S +FY + +G+ A
Sbjct: 735 TLLNRLFHYYQDQSINIAKKSRIIFNENYRSTTEIVDFVSTYFY---VSDGIKA------ 785
Query: 768 KIDFPWPVPD-KPMLFYVTQGQEEIAGS--GTSYVNRTEASNV----EKITTRF-IRCGM 819
+ D P P KP++F+ +G+ ++ + TS++N E ++V + + T + + G
Sbjct: 786 RGDVH-PHPRLKPLIFHHVRGECHLSSTITSTSWLNYAEVNSVVNMVQVLLTDWPMEWGD 844
Query: 820 K-PEQIGVITPYEGQRAFLVQ-HMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
K P+QI V++ EGQ+ ++ H++ +G + + V ++ QG++ +II++ V
Sbjct: 845 KDPKQICVLS--EGQQVAAIRIHLRRKG------FYGVSVQNLANIQGKQFRVIIITTVH 896
Query: 878 SNDH------QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+ D F +D R LN ALTRA+ ++VIG+ L
Sbjct: 897 TRDKLLQLDSSCPEFFDDIRALNTALTRAQSLVVVIGDAGAL 938
Score = 151 (58.2 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 83/320 (25%), Positives = 137/320 (42%)
Query: 293 ADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDK 352
AD+ + S +E V + W +S A A D D +N V + D D
Sbjct: 2084 ADHPSKGSYSNVEEYVQI-WRPLCEMESAA---TAVDDSDCVVIEN-----VAITWD-DS 2133
Query: 353 RLKE--SQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYDASKTWSG 410
RL S +EN+ +W + + + K D + + EL +Y TW
Sbjct: 2134 RLSGNFSLPEENIK-KWAIEFDLGR-CLLCIRKRDLEQNQAEQSELDPKYF-----TW-- 2184
Query: 411 LGHVIKI-----PDNFGDE---VGLELK-SSAGAPT-EATTGFSVDFIWKSTSFDRMQLA 460
+ H + P+N G++ + +K +S P + F+V+ I K R + A
Sbjct: 2185 VAHAVTTLCSDSPENSGNKFKIINFNVKYASMKIPKFKRNETFTVEIIPKLLPDIRKESA 2244
Query: 461 LRKFAVDDQSV-SAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR 519
+ ++ V + + HR++ + ++ + L + + LP LN SQ A++ A+
Sbjct: 2245 VNNLKGANELVQNIALKHRIVNQSSNQDVPLYLLMREEAPAGLPQLNESQFKALEKALNG 2304
Query: 520 PLSLIQGPPGTGKTVTSATIVY---QLV------------KQTGSPVLVCAPSNIAVDQL 564
++IQGPPGTGKTV A IVY QL K +L C PSN +VD +
Sbjct: 2305 KFTIIQGPPGTGKTVVGAYIVYWFSQLNSRNLWRLKDPTDKDKREVILYCGPSNKSVDVV 2364
Query: 565 TEKIHRTGLKVVRVCAKSRE 584
E + + G K+ + SR+
Sbjct: 2365 AEYLLKFGEKLKLLRVYSRQ 2384
Score = 85 (35.0 bits), Expect = 8.4e-35, Sum P(2) = 8.4e-35
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 482 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQR--------PLSLIQGPPGTGKT 533
HNV C +P + + + LN Q A+ + + PL LI GP GTGKT
Sbjct: 510 HNVLPDFSNCCVPVNLTKQS--QLNNKQQIALNFILGKCEDDKVAAPL-LIYGPFGTGKT 566
Query: 534 VTSATIVYQLVKQTGSPVLVCAPSNIAVD-QLTEKIH 569
+ A+ +L ++ + VL+C +N + D + E H
Sbjct: 567 LCLASAAKELAHRSQNKVLICTYTNSSADLYVREHFH 603
Score = 46 (21.3 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 413 HVIKIPDNFGDEVGLELKSSAGAPTEA--TTGFSVDFIWKSTSFDRMQLALRKFAVDDQS 470
H +K+P F + ++ ++S EA G + + D MQ+A + F+V D
Sbjct: 672 HELKLPKGFFTHILID-EASQMLEGEALMALGLADKHTRVVLAGDHMQMAPKLFSVTDDK 730
Query: 471 VSAY-IYHRLLGHNVDE 486
S + + +RL + D+
Sbjct: 731 RSEHTLLNRLFHYYQDQ 747
Score = 40 (19.1 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 16/92 (17%), Positives = 43/92 (46%)
Query: 343 LVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSY 402
+V L+A+ D LKE + ++ + D N++ F+ A+ + + +++ +
Sbjct: 993 VVNLQAETDAILKEMENYDSDAQKSDDD-NEQKRRIFTSAEKENLLEMVRNQPALYKRGE 1051
Query: 403 DASKTWSGLGHVIKIPDNFGDEVGLELKSSAG 434
+ + G++I DN + + ++ + + G
Sbjct: 1052 LVMEGYQS-GYIIPY-DNPSERIDIKGRKNIG 1081
Score = 37 (18.1 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 559 IAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS 591
I +D K TGLK V + E +D +S
Sbjct: 1248 IRIDDKRRKDF-TGLKTFTVDPPNAEVLDDAIS 1279
Score = 37 (18.1 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 21/72 (29%), Positives = 29/72 (40%)
Query: 500 PNL-PDL-NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
PN P L NR + Y K + L P G+ S I+ + K+ S L C
Sbjct: 1710 PNTSPGLVNRLKKYNEKFESLQVLEKCLDP-NNGQNCGSFIILTSVWKKIKSAALTCDFY 1768
Query: 558 NIAVDQLTEKIH 569
+A T+ IH
Sbjct: 1769 KMADLISTDDIH 1780
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 415 (151.1 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 109/302 (36%), Positives = 167/302 (55%)
Query: 631 MLK-KNAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVIL-G 687
ML+ ++ K L NAD+I CT GA + + + +++DE+ Q E E + + L G
Sbjct: 492 MLENEDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPG 551
Query: 688 AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPS 747
+ IL+GD QL +V + +A +SLFERLV+LG L+VQYRMHP +S+FP+
Sbjct: 552 LRHAILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHLLDVQYRMHPSISRFPN 611
Query: 748 NFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
FY G +++ E K + V +G+EE G G S N E + V
Sbjct: 612 KEFYGGRIKDAENVKESIYQKRFLQGNMFGSFSFINVGRGKEEF-GDGHSPKNMVEVAVV 670
Query: 808 EKITTRFIR--CGMKPE-QIGVITPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAF 863
+I + + C + + +GV++PY+GQ RA + SL + + + V SVD F
Sbjct: 671 SEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFA-LNVRSVDGF 729
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNL 922
QG E+D+II+S VRSN + +GFLN+ +R NVALTRA++ + VIGN L+ +W L
Sbjct: 730 QGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNETTLALSGSIWATL 789
Query: 923 LN 924
++
Sbjct: 790 IS 791
Score = 111 (44.1 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
+ LI GPPGTGKT T AT+++ L+K V VCAP+N A+ Q+ ++
Sbjct: 244 VKLIWGPPGTGKTKTVATLLFALLKLRCKTV-VCAPTNTAIVQVASRL 290
Score = 40 (19.1 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 315 GLNKKSIAY-FSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKE 356
G + + Y +L T+ +YQ G L+ L D +R+ +
Sbjct: 85 GSSSNKLFYDITLKATESLSAKYQPKCGDLIALTMDKPRRIND 127
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 469 (170.2 bits), Expect = 4.7e-41, P = 4.7e-41
Identities = 136/434 (31%), Positives = 217/434 (50%)
Query: 506 NRSQVYAVK-HAIQRPLSLIQGPPGTGKTVTSATIVY---QLVKQT-----GS--P--VL 552
N +V V+ H + P+++I G G GK+ A ++ QL +++ G+ P +L
Sbjct: 556 NAEEVKKVQTHTL--PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEVLTVGNVRPWKLL 613
Query: 553 VCAPSNIAVDQLTEKIHRTGL-KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXX 611
+ + +N+AVD++ + G K VRV S I P+ +LH N
Sbjct: 614 ISSSTNVAVDRVLLGLLSLGFEKFVRV--GSVRKIAKPILPYSLHAGSENENEQLKELHG 671
Query: 612 XXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDE 671
K K K+LL V+ TC P + +KF +++DE
Sbjct: 672 LMKEDLTPLERVYVRKSIEQHKLGTNKTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDE 731
Query: 672 SMQATEPECMVPVI-LGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRP 729
Q TEP ++P+ ++LILVGD QL P + AA GL Q+LF+RL ++G +P
Sbjct: 732 CSQITEPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHENGLEQTLFDRLCLMGHKP 791
Query: 730 FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQE 789
L QYR HP +S ++ FYEG+L +G+ ER + W +P + FY +G E
Sbjct: 792 VLLRTQYRCHPAISDISNDLFYEGNLVDGISETER--GPL-LEW-LPT--LCFYNIKGPE 845
Query: 790 EIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
+I S+ N EA+ K+ I G+ IGVIT Y+ Q + + H+
Sbjct: 846 QIERDN-SFHNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQM-YKLCHLLSAVDFDN 903
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+ ++V++VDAFQG EK++II+SCVR+ +GF++ +R+NVALTR + ++++GN
Sbjct: 904 PDIKAVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGRRHLLIVGN 960
Query: 910 PKVLSKQPLWNNLL 923
L K LW ++
Sbjct: 961 LACLRKNRLWGRVI 974
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 429 (156.1 bits), Expect = 7.1e-41, Sum P(2) = 7.1e-41
Identities = 108/310 (34%), Positives = 169/310 (54%)
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRL--LKIKFHSILIDESMQATEPECMVPVILGAKQ 690
++N + +L A V+C T G+ + L ++F ++IDE+ Q E ++P+ G K+
Sbjct: 1502 RRNIQARILSEAQVLCSTLSGSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRYGCKK 1561
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRP-FRLEVQYRMHPELSKFPSNF 749
I+VGD QL P V+ + AA QSLF R+ + L+VQYRMHP +SKFPS+
Sbjct: 1562 CIMVGDPNQLPPTVLSQAAASYNYEQSLFVRMQKNHPDSVYMLDVQYRMHPMISKFPSSE 1621
Query: 750 FYEGSLQNGVCADERKLSKIDFPW--PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
FY L++G + L PW P P F+ G+ E S N EA
Sbjct: 1622 FYNSKLKDG----DGMLELNTRPWHKDPPLTPYRFFDILGKHEKNELTRSLFNTDEAIVA 1677
Query: 808 EKITTRFIRCGMKPE---QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
++T + ++ + + +IG+I+PY+ Q + + + P I EI+ +VD FQ
Sbjct: 1678 LQLTDKLMQLLPQDKFSGKIGIISPYKEQIRKIKEVFVRKYGKP--ILDEIDFNTVDGFQ 1735
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
G+EK++IIMSCVR++ +GFL+D RR+NVALTRAK + ++GN LS+ +W LL
Sbjct: 1736 GQEKEIIIMSCVRASATGNVGFLSDVRRMNVALTRAKTTLWILGNKDSLSRNEVWKKLLT 1795
Query: 925 FYKEQKVLVE 934
E+ + +
Sbjct: 1796 DAGERNCITQ 1805
Score = 100 (40.3 bits), Expect = 7.1e-41, Sum P(2) = 7.1e-41
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIV-YQLVKQTGSPVLVCAPSNIAVD 562
+N SQ A+ + SLIQGPPGTGKT T IV Y L ++ + V+ + S +
Sbjct: 1297 VNDSQARAIMGTFKSEGFSLIQGPPGTGKTKTILGIVGYSLSQEKNNKVIDISGSGSSPT 1356
Query: 563 QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN 601
++K K++ +CA S A+D V L L + +RN
Sbjct: 1357 P-SDKA-----KIL-ICAPSNAAVDELV--LRLRDGVRN 1386
Score = 44 (20.5 bits), Expect = 7.8e-34, Sum P(3) = 7.8e-34
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSRE 584
VL PS + LT K TG+KV+++ RE
Sbjct: 1223 VLRVYPSGPMMGALTPKSVVTGMKVMQMVTIERE 1256
Score = 38 (18.4 bits), Expect = 7.8e-34, Sum P(3) = 7.8e-34
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSL 523
FS PN P L +VY K P L
Sbjct: 76 FSFPNNPVLEELKVYIGKSLSTCPYCL 102
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 429 (156.1 bits), Expect = 7.5e-41, Sum P(2) = 7.5e-41
Identities = 127/400 (31%), Positives = 191/400 (47%)
Query: 551 VLVCAPSNIAVDQLTEKIHRTGL----------KVVRVCAKSREAIDSPVSFLALHNQIR 600
+L+CAPSN AVD++ ++ R GL +VRV S ++S VS L + R
Sbjct: 464 ILLCAPSNGAVDEIVSRLIRDGLLNADGRKYNPNLVRVGPGSHSDVES-VS-LDYMVRCR 521
Query: 601 NMEMNSXXXXXXXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLL 660
MNS S + R + +LD AD++ T +G L
Sbjct: 522 QQLMNSNSAIPSSSASTAAATSGSS--RSTQDTSSIRTLVLDEADIVATTLSFSGASLLT 579
Query: 661 KIK--FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
K+ F ++IDE+ QA E ++P+ G K+++LVGD QL ++ A + QSL
Sbjct: 580 KMAGGFDIVIIDEAAQAVETSTLIPIQHGCKKVVLVGDPKQLPATIISPLAIKYKYDQSL 639
Query: 719 FERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK 778
F+RL P L QYRMH + FPS FY+ L +G R P+
Sbjct: 640 FQRLQEKN-SPHMLTTQYRMHSLIRAFPSRHFYQDLLLDGPNIPSRATHYHSNPF---FG 695
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQRA 835
P++FY E G S N E + F + + +IG+I+PY Q+
Sbjct: 696 PLVFYDLSWSTETKPGGGSVFNEHECKMAMYLFQLFTKVYPDEDFASRIGIISPYR-QQV 754
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS--NDHQGIGFLNDPRRL 893
++ + K Y I + +VD FQGRE+++II SCVR+ + GIGFL+D RR+
Sbjct: 755 LALREI-------FKNYPGISIDTVDGFQGREREIIIFSCVRAPVEEGAGIGFLSDVRRM 807
Query: 894 NVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
NVALTR + ++++GN K LS WN L+ + + L+
Sbjct: 808 NVALTRPRSSLLILGNTKALSINKDWNELIQHTQNNQQLI 847
Score = 89 (36.4 bits), Expect = 7.5e-41, Sum P(2) = 7.5e-41
Identities = 41/165 (24%), Positives = 70/165 (42%)
Query: 403 DASKTWSGLGHVIKIPDNFGDEVGLELKSSAG-APTEATTGFSVDFIWKSTSFDRMQLAL 461
+ ++T +G V + DN G +V +K G + + + W +T +
Sbjct: 232 EQNRTLHLIGTVEHL-DNGGIKVKFYVKGIKGDRARQVSLLLRYEIDWWTTKLCNLSTLQ 290
Query: 462 RKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ-R 519
R+FA Q + L+ + D E +P N SQ+ A+ A++
Sbjct: 291 REFAALYQCSQSNFMKTLMMRDDDGEDGIVMKIPPLLHDQFSSTYNDSQLNALTSALEGN 350
Query: 520 PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
++LIQGPPGTGKT ++ L+ T P + +N+ D L
Sbjct: 351 AITLIQGPPGTGKTHVILGLISVLLHSTIVPKVKSGGNNLG-DHL 394
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 431 (156.8 bits), Expect = 9.7e-41, Sum P(3) = 9.7e-41
Identities = 113/343 (32%), Positives = 182/343 (53%)
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGD-------PRLLKIKFHSILIDESMQATEPE 679
K R ++ ++ +L NA VICCT +G RL F ++IDE+ QA E E
Sbjct: 1911 KECRGRRQESQALVLQNAHVICCTLSTSGSIVLENAFRRLGHEPFSCVIIDEASQAKETE 1970
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-------- 731
++P++ +ILVGD QL P V+ +KA G QSL RL + P
Sbjct: 1971 TLIPMLYRCPSVILVGDPNQLPPTVVSQKAKEFGFDQSLMARLCK-SLHPSNSKLPPILL 2029
Query: 732 LEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPM-LFYVTQGQEE 790
L +QYRMHP++ +FPS + Y +L+N C +K + WP KP +F V G+E
Sbjct: 2030 LSMQYRMHPDICEFPSKYIYNSALKND-CETAQK--RCSLSWPF--KPYKVFDVMDGRE- 2083
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
S++N E S V + + C + ++GVITPY Q+ ++ ++ G + +
Sbjct: 2084 -TKERDSFINHKEVSLVGLLLK--LLCKEQAVRVGVITPYNAQKHRILDAIKTSG-INKQ 2139
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIGN 909
+ ++EV +VD FQGRE D II+SCVR++ G IGF+ + +R+NV +TRAK+ + ++G+
Sbjct: 2140 L--QVEVDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQRMNVTITRAKFSLFILGH 2197
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL--ILFSKP 950
+ L +Q W L+ ++ ++ N + + I+ KP
Sbjct: 2198 LRTLREQSDWGALIEDAGRRECIINTMQKNFESDVKKIVKQKP 2240
Score = 96 (38.9 bits), Expect = 9.7e-41, Sum P(3) = 9.7e-41
Identities = 37/110 (33%), Positives = 51/110 (46%)
Query: 503 PDLNRSQVYAVK------HAIQR-P-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC 554
P+ NR Q A+ H Q+ P LI GPPGTGK+ T ++Y+L+ +
Sbjct: 1713 PEFNRDQARAIACGIAMIHRKQKTPKFLLIHGPPGTGKSKTIGGLLYKLLSSATN----- 1767
Query: 555 APSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVS--FLALHNQIRNM 602
S+ V L K RT V +CA S AIDS + L + RN+
Sbjct: 1768 --SSATVGNLHSKSRRTR---VLLCAPSNAAIDSLMKKVILIFKEKCRNI 1812
Score = 53 (23.7 bits), Expect = 9.7e-41, Sum P(3) = 9.7e-41
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLEADY---DKRLKESQTQENVTV 310
DED + + E+ + Q P ++E DY +++++ QT+EN V
Sbjct: 916 DEDIERACQQAEEKIRQQQPRKPADEMERDYKQVEEKIRPQQTRENSDV 964
Score = 48 (22.0 bits), Expect = 9.5e-36, Sum P(3) = 9.5e-36
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 497 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVT----SATIVYQLVKQTGSPVL 552
F+ N+P N + + P+S + P T K T SA++V ++ K P
Sbjct: 1327 FTDKNVPPSNAANDHLFLKPGMSPMSQKKAKPSTTKIYTPSSRSASLVLEMEKGAKPP-- 1384
Query: 553 VCAPSNIA 560
P+N+A
Sbjct: 1385 --PPANVA 1390
Score = 41 (19.5 bits), Expect = 1.0e-38, Sum P(4) = 1.0e-38
Identities = 25/76 (32%), Positives = 35/76 (46%)
Query: 349 DYDKRLKESQ-----TQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDELKLRYSYD 403
DYD L ESQ TQ+ V WD S+ +L K+D ++ Q DE +
Sbjct: 850 DYDD-LSESQVFEFETQQYVASAWDNADLDGSVLTKNL-KSDRILK-PQLDETP----NE 902
Query: 404 ASKTWSGLGHVIKIPD 419
AS +WS ++ PD
Sbjct: 903 ASPSWSSETELV--PD 916
Score = 39 (18.8 bits), Expect = 1.0e-38, Sum P(4) = 1.0e-38
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 282 QNIFGPLVKLEADYD 296
Q G +VK+E +YD
Sbjct: 337 QKTMGRMVKVEPEYD 351
Score = 39 (18.8 bits), Expect = 1.0e-38, Sum P(4) = 1.0e-38
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 337 QNIFGPLVKLEADYD 351
Q G +VK+E +YD
Sbjct: 337 QKTMGRMVKVEPEYD 351
Score = 38 (18.4 bits), Expect = 3.5e-39, Sum P(3) = 3.5e-39
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 294 DYDKRLKESQ-----TQENVTVRWD 313
DYD L ESQ TQ+ V WD
Sbjct: 850 DYDD-LSESQVFEFETQQYVASAWD 873
Score = 37 (18.1 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 151 KDGPLGETVLECYTCGVRNIFVLGFIPAKADSVVVLLCRTPCAAQNSL 198
K +G + + + + +G + +K+ VLLC AA +SL
Sbjct: 1750 KSKTIGGLLYKLLSSATNSSATVGNLHSKSRRTRVLLCAPSNAAIDSL 1797
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 383 (139.9 bits), Expect = 8.7e-39, Sum P(2) = 8.7e-39
Identities = 104/298 (34%), Positives = 156/298 (52%)
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILI-DESMQATEPECMVPVIL-GAKQL 691
++ K L NAD+I CT + +I +L+ DE+ Q E E + + L G
Sbjct: 529 EDIRKFCLQNADIIFCTASSVANINPARIGSVDLLVVDETAQLKECESVAALQLPGLCHA 588
Query: 692 ILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFY 751
+L+GD QL +V ++ +A +SLFERLV++G L VQYRMHP +S+FP+ FY
Sbjct: 589 LLIGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHLLNVQYRMHPSISRFPNKEFY 648
Query: 752 EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT 811
G + + E K + V +G+EE G G S N E + + KI
Sbjct: 649 GGRITDAANVQESIYEKRFLQGNMFGTFSFINVGRGKEEF-GDGHSPKNMVEVAVISKII 707
Query: 812 TRFIRCGMKPEQ---IGVITPYEGQ-RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
+ + + +Q +GVI+PY+GQ RA + SL + V SVD FQG E
Sbjct: 708 SNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGE 767
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNLLN 924
D+II+S VR N + +GFL++ +R NVALTRA++ + VIGN L+ +W L++
Sbjct: 768 VDVIIISTVRCNVNGNVGFLSNRQRANVALTRARHCLWVIGNGTTLALSGSIWAELIS 825
Score = 116 (45.9 bits), Expect = 8.7e-39, Sum P(2) = 8.7e-39
Identities = 55/198 (27%), Positives = 86/198 (43%)
Query: 411 LGHVIKIPDNFGD-EVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLALRKFAVDDQ 469
LG+V + +GD ++ + S + T V F+ T+ R+ AL K A D
Sbjct: 149 LGYVFSV---YGDSKISVHFSRSISQSEKHTFCTGV-FLINITTNTRIWNALHKDAADST 204
Query: 470 SVSAYIYHRLLGHNVDEVLFRCHLPKHFS-APNLPD------LNRSQVYAV--------- 513
+ + + + E F C S + + D LN SQ A+
Sbjct: 205 LIQSVLQEDA---SATEQCFSCENDVDGSDSDRVVDIIRSAKLNSSQEAAILGFLKTRNC 261
Query: 514 KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGL 573
KH + + LI GPPGTGKT T AT++ L+ Q +VCAP+N + + ++
Sbjct: 262 KH--KESVKLIWGPPGTGKTKTVATLLSTLM-QLKCKTVVCAPTNTTIVAVASRLLSLSK 318
Query: 574 KVVRVCAKSREAIDSPVS 591
+ + VCA + AI VS
Sbjct: 319 ETI-VCAPTNSAIAEVVS 335
Score = 46 (21.3 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 530 TGKTVTS-ATIVYQLVKQTGSPVLVCAPSNIAVDQLTEK 567
T T+ + A+ + L K+T +VCAP+N A+ ++ +
Sbjct: 302 TNTTIVAVASRLLSLSKET----IVCAPTNSAIAEVVSR 336
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 474 (171.9 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 131/419 (31%), Positives = 210/419 (50%)
Query: 520 PLSLIQGPPGTGKTVTSATIVY---QLVKQTGSP---------VLVCAPSNIAVDQLTEK 567
P+++I G G GK+ A ++ QL +++ +P +L+ + +N+AVD++
Sbjct: 1648 PITIIHGVFGAGKSYLLAVVILFFVQLFEKSEAPTIGNARPWKLLISSSTNVAVDRVLLG 1707
Query: 568 IHRTGLK-VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADE 626
+ G + +RV S I P+ +LH N
Sbjct: 1708 LLSLGFENFIRV--GSVRKIAKPILPYSLHAGSENESEQLKELHALMKEDLTPTERVYVR 1765
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI- 685
K K ++LL V+ TC P + +KF +++DE Q TEP ++P+
Sbjct: 1766 KSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPASLLPIAR 1825
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRPFRLEVQYRMHPELSK 744
++LILVGD QL P + AA GL Q+LF+RL ++G +P L QYR HP +S
Sbjct: 1826 FECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPILLRTQYRCHPAISA 1885
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEA 804
++ FY+G+L NGV ER S + W +P + FY +G E+I S+ N EA
Sbjct: 1886 IANDLFYKGALMNGVTEIER--SPL-LEW-LPT--LCFYNVKGLEQIERDN-SFHNVAEA 1938
Query: 805 SNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
+ K+ I G+ IGVIT Y+ Q + + H+ + ++V++VDAFQ
Sbjct: 1939 TFTLKLIQSLIASGIAGSMIGVITLYKSQM-YKLCHLLSAVDFHHPDIKTVQVSTVDAFQ 1997
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLL 923
G EK++II+SCVR+ +GF++ +R+NVALTR K ++++GN L K LW ++
Sbjct: 1998 GAEKEIIILSCVRTRQ---VGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNQLWGRVI 2053
Score = 40 (19.1 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 299 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG 331
+K+S++ EN ++ L++ + +L +TDG
Sbjct: 1044 MKKSRSLENENLQRLSLLSRTQVPLITLPRTDG 1076
Score = 40 (19.1 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 354 LKESQTQENVTVRWDVGLNKKSIAYFSLAKTDG 386
+K+S++ EN ++ L++ + +L +TDG
Sbjct: 1044 MKKSRSLENENLQRLSLLSRTQVPLITLPRTDG 1076
Score = 40 (19.1 bits), Expect = 1.5e-38, Sum P(3) = 1.5e-38
Identities = 19/81 (23%), Positives = 41/81 (50%)
Query: 171 FVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNWDQEQWKPLIADRS--FLSWLVKVPTEQ 228
F+LG K D V+ + ++ NS++ +N +Q ++ + D+S +S + P +
Sbjct: 714 FILGSDLDKNDEHVL---PSTSSSDNSVQLLNTNQNHYECIALDKSNTHISNSLFYPLGK 770
Query: 229 EQQRGRQVTSAQIAKLEEVWK 249
+ + T A I++ E++ K
Sbjct: 771 KHLISKD-TEAHISEPEDLGK 790
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 398 (145.2 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 105/298 (35%), Positives = 159/298 (53%)
Query: 633 KKNAEKSLLDNADVICCTCVGAGDPRL-LKIKFHSILIDESMQATEPECMVPVIL-GAKQ 690
K +K LDNA ++ CT + RL + ++IDE+ Q E E +P+ L G +
Sbjct: 523 KFELQKLCLDNAYLLFCTA--SSSARLHMSSPIQLLVIDEAAQLKECESAIPLQLRGLQH 580
Query: 691 LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFF 750
IL+GD QL ++ A+ A L +SLFERLV+LG L +QYRMHP +S FP+ F
Sbjct: 581 AILIGDEKQLPAMIKSNIASEADLGRSLFERLVLLGHNKQLLNMQYRMHPSISIFPNREF 640
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI 810
Y+ + + R K P + + G+E+ G G S N E S V +I
Sbjct: 641 YDMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYGREQF-GEGYSSKNLVEVSVVAEI 699
Query: 811 TTRFIRCGMKPEQ---IGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGRE 867
++ K + +GVI+PY+ Q F +Q + + + V SVD FQG E
Sbjct: 700 VSKLYSVSRKTGRTISVGVISPYKAQ-VFAIQERIGEKYNTEGTFT-VSVRSVDGFQGGE 757
Query: 868 KDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK-QPLWNNLLN 924
+D+II+S VRSN + IGFL++ +R NVALTRA+Y + ++GN L+ + +W L++
Sbjct: 758 EDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEATLTNNRSVWRQLVD 815
Score = 100 (40.3 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
+ LI GPPGTGKT T++ ++ +K L CAP+NIAV ++ ++
Sbjct: 290 IKLIWGPPGTGKTKTTSVLLLNFLKMR-CRTLTCAPTNIAVLEVCSRL 336
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 443 (161.0 bits), Expect = 2.4e-38, P = 2.4e-38
Identities = 138/466 (29%), Positives = 224/466 (48%)
Query: 512 AVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK-------QTGS---P--VLVCAPSNI 559
A +H I P+++I G G GK+ + ++ LV+ + G+ P +L+ + +N+
Sbjct: 459 AEEHQIF-PITIIHGVFGAGKSFLLSVVILFLVQLFESSEAKEGAELAPWKLLIASSTNV 517
Query: 560 AVDQLTEKIHRTGLK-VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXX 618
AVD++ + G + +RV S I + +LH N
Sbjct: 518 AVDRILLCLLDLGFEDFIRV--GSIRKITKAILPYSLHAGSGNENEQLKELLALMKEDLA 575
Query: 619 XXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
K K K+ L V+ TC P L +KF +++DE Q TEP
Sbjct: 576 PAEKMYVRKSIERHKLGTNKTALQQVKVVGVTCAACPFPCLDTLKFPVVVLDECSQMTEP 635
Query: 679 ECMVPVI-LGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRPFRLEVQY 736
++P+ ++L+LVGD QL P + ++ GL Q+LF+RL ++G + L QY
Sbjct: 636 TSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHEKGLEQTLFDRLCLMGHKTILLRTQY 695
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGT 796
R HP +S + FYEG+L +GV ER +D W +P + FY G E+I +
Sbjct: 696 RCHPAISAIANELFYEGNLIDGVSEKERS-PLLD--W-LPT--LCFYSVNGLEQIERDNS 749
Query: 797 SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIE 856
Y N E K I G+ +GVIT Y+ Q + +Q++ A + ++
Sbjct: 750 FY-NMAEVHFTVKFIQALIASGIDGSAVGVITFYKSQM-YKLQNLLRSIHSEAFPVKAVQ 807
Query: 857 VASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
V++VDAFQG EK+++++SCVR+ GF + +R+NVALTRAK ++++GN LSK
Sbjct: 808 VSTVDAFQGAEKEIVVLSCVRTRQ---TGFTDSEKRMNVALTRAKRHLLIVGNLACLSKN 864
Query: 917 PLWNNLLNFYK-EQKVLVEGP-----LNNLKESLILFSKPKQYFKK 956
L+ ++N K + L G LNN+ + + K ++ KK
Sbjct: 865 RLYERVINHCKGRENGLQHGSQCEQQLNNVLKYYLEEKKEEEQSKK 910
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 365 (133.5 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 109/336 (32%), Positives = 168/336 (50%)
Query: 622 SSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
S D Y+ + A K LD VI CTC A L K+ ILIDE+ ATEPE +
Sbjct: 2582 SKEDLSWYKTILGKARKFELDQHRVILCTCSCAASASLRKLDVRQILIDEAGMATEPETL 2641
Query: 682 VPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
+P++ +K +++L+GDH QL PVV ++ GL +SLFER V L+ QYRMH
Sbjct: 2642 IPLVAFSKAEKVVLLGDHKQLRPVVKNEQLQNLGLDRSLFERYHV---DAHMLDTQYRMH 2698
Query: 740 PELSKFPSNFFYEGSLQN--GVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTS 797
+ FPS FYE L+ G+ L I ++F QG E+ T
Sbjct: 2699 EGICAFPSMEFYEKKLKTWQGLRRPPSILGHIG----KESCSVIFGHVQGHEQSLLVSTD 2754
Query: 798 YVNRTEASNVEKITT-----RFIRCG--MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
N +N E++ + + G ++P+ + ++TPY Q A + + + +G
Sbjct: 2755 EGNENSKANPEEVAAVVRIAKQLTLGRTVEPKDVAILTPYNAQAAEISKRLVREG----- 2809
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRS---ND----------HQGIGFLNDPRRLNVAL 897
+ V S+ QG E +++S VR+ +D + +GF+ DP ++NVA+
Sbjct: 2810 -VSGVTVCSITKSQGSEWRYVLVSTVRTCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAI 2868
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
TRA+ G+ VIG+ ++LS PLW L+F + Q+ LV
Sbjct: 2869 TRAREGLCVIGDHRLLSCCPLWRRFLDFCEAQRSLV 2904
Score = 205 (77.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 146/573 (25%), Positives = 231/573 (40%)
Query: 415 IKIPDNFGDEVGLELKSSAGA------PTEATTGFSVDFIWKSTSFDRMQLALRKFAVDD 468
+ PD+ EV LE ++S+ P + + T + Q+ F
Sbjct: 670 VPAPDHTVYEVRLETRASSEQALWLLLPNHCCSALGLQPETSPTLEVQFQVDPLTFRFWH 729
Query: 469 QSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAI------QRPLS 522
Q+V A RL+ V + L C+LP P NR Q AV +RP++
Sbjct: 730 QAVDALPEERLV---VPD-LPTCNLPHPLPIPPAMQGNRKQKLAVAFIAGSSPGGRRPIA 785
Query: 523 --LIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCA 580
LI GP GTGKT T A ++++Q + VL+C +N A D E+ H G V +
Sbjct: 786 PLLIYGPFGTGKTYTLAMASLEVIRQPHTKVLICTHTNSAADIYIEE-HFHGY----VSS 840
Query: 581 KSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRYRMLKKNAEKSL 640
EA +P +R M + + D + +R + AE
Sbjct: 841 GHPEA--AP---------LRVMYTDRPPSQTDATVLQYCCLTQ-DRRAFRAPTR-AE--- 884
Query: 641 LDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAK--QLILVGDHC 698
L+ ++ T A + R+ F ILIDE+ Q E E + P+ A +++L GDH
Sbjct: 885 LEQHRIVVTTTSQARELRVPAGFFSHILIDEAAQMLECEALTPLRYAAPGTRVVLAGDHM 944
Query: 699 QLGP-VVMCKKAARAG--LSQSLFE---RLVVLGIRPFRL--EVQYRMHPELSKFPSNFF 750
Q+ P + +A AG L LF+ R + RL YR + F S F
Sbjct: 945 QVTPRLFSVPRAQAAGHTLLYRLFQHYQREAHEVAQRSRLIFHQNYRSTEAILSFVSRHF 1004
Query: 751 YEGSLQNGVCADERKLSKIDFPWPVPD-KPMLFYVTQGQEEIAGSGTSYVNRTEASNVEK 809
Y + + A R P P P P++F G E S TS++N E + V +
Sbjct: 1005 YVAK-GSPIHASGR------VP-PHPRLHPLMFCHVAGNPERDLSSTSWLNAAEVAQVVE 1056
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ----EIEVASVDAFQG 865
R + G P G E + +V H +L ++ + ++ V S + G
Sbjct: 1057 -QVRDLHDGW-PSCWGA---REQKHICVVSHGAQVTALRQELRKRNLGQVSVGSFEILPG 1111
Query: 866 REKDLIIMSCVRSNDHQ-------GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ-- 916
RE ++++S V N H +GF D R LN +TRA+ ++ +GN L
Sbjct: 1112 REFRVVVLSTVH-NHHSLLSSGTASLGFFTDARVLNTIMTRAQSQVVAVGNALALCSSGA 1170
Query: 917 --PLWNNLLN-FYKEQKVLVEG-PLNNLKESLI 945
LW + + K V E L ++++ ++
Sbjct: 1171 CSKLWKSFIRECVKHHSVCPESLSLEHIEQGVL 1203
Score = 124 (48.7 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 36/85 (42%), Positives = 46/85 (54%)
Query: 497 FSAPNLPD-LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQL------------ 543
F P P LNRSQ AV+ A+++ ++IQGPPGTGKTV + IV+
Sbjct: 2414 FDLPGGPHTLNRSQNRAVRAALKKQFTVIQGPPGTGKTVVAFHIVFWFHKSNEEQTGACD 2473
Query: 544 ---VKQTGSP-VLVCAPSNIAVDQL 564
KQ G P +L C PSN +VD L
Sbjct: 2474 TPREKQLGGPCILYCGPSNKSVDVL 2498
Score = 72 (30.4 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 264 VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLK-ESQTQENVTVRWDV 314
+D+ P V R D +Y ++GP LE+ L+ +S T ++V++ WDV
Sbjct: 2158 LDQMPQAVRDRCPDVAEYSRVWGPFCSLESATGAVLESDSITLQHVSISWDV 2209
Score = 60 (26.2 bits), Expect = 4.0e-36, Sum P(4) = 4.0e-36
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 332 DGYQYQNIFGPLVKLEADYDKRLK-ESQTQENVTVRWDV 369
D +Y ++GP LE+ L+ +S T ++V++ WDV
Sbjct: 2171 DVAEYSRVWGPFCSLESATGAVLESDSITLQHVSISWDV 2209
Score = 42 (19.8 bits), Expect = 2.3e-37, Sum P(4) = 2.3e-37
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 127 RGHTSGSHIINHLVRAKHKE--VTLHK 151
R HT H++ +VR +E V ++K
Sbjct: 540 RWHTGNRHVVPGVVRTAEQEALVAMYK 566
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 402 (146.6 bits), Expect = 4.8e-37, Sum P(2) = 4.8e-37
Identities = 100/270 (37%), Positives = 153/270 (56%)
Query: 667 ILIDESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
+++DE+ Q E E + + L G + IL+GD QL +V + +A +SLFERLV+L
Sbjct: 351 LVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERLVLL 410
Query: 726 GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT 785
G + L+VQYRMHP +S+FP FY G +++ E K + V
Sbjct: 411 GHKKHLLDVQYRMHPSISRFPYKEFYGGRIKDAANVQESIYQKRFLQGNMFGSFSFINVG 470
Query: 786 QGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ---IGVITPYEGQ-RAFLVQHM 841
+G+EE G G S N E + V +I + + + + +GVITPY+GQ RA +
Sbjct: 471 RGKEEF-GDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVITPYKGQVRAIQERIR 529
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
SL +++ + V SVD FQG E+D+II+S VRSN + +GFL++ +R NVALTRA+
Sbjct: 530 DKYSSLSGELFT-VNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRAR 588
Query: 902 YGIIVIGNPKVLSKQ-PLWNNLLNFYKEQK 930
+ + VIGN L++ +W NL++ K +K
Sbjct: 589 HCLWVIGNESTLARSGSIWANLISDSKRRK 618
Score = 69 (29.3 bits), Expect = 4.8e-37, Sum P(2) = 4.8e-37
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 453 SFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYA 512
+FD +Q L+ + + + R G NV +++ L A L L
Sbjct: 167 NFDLIQSVLQP---NTAGMEPIVSSRTWGQNVLDIIRSSKLNSSQEAAILSCLETRDS-- 221
Query: 513 VKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
H + + LI GP KT T AT++ L+K V VCAP+N A+ ++T ++
Sbjct: 222 -NH--KNSVKLIWGPL---KTKTVATLLLVLLKLRCKTV-VCAPTNTAIVEVTSRL 270
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 381 (139.2 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
Identities = 101/291 (34%), Positives = 156/291 (53%)
Query: 631 MLKKNAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPECMVPVIL-GA 688
++K++ L NA +I CT GA + + +++DE+ Q E E + + L G
Sbjct: 397 LMKEDIRTFCLQNAHIIFCTASGAAEMTAERAGSIDMLVVDEAAQLKECESVAALQLQGL 456
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSN 748
+L+GD QL +V + +A +SLFERL LG + L VQYRMHP +S FP+
Sbjct: 457 HHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLDSLGHKKHLLNVQYRMHPSISLFPNM 516
Query: 749 FFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVE 808
FY G + + E K + V G+EE G G S N E + V
Sbjct: 517 EFYGGKISDAEIVKESTYQKRFLQGNMFGSFSFINVGLGKEEF-GDGHSPKNMVEIAVVS 575
Query: 809 KITTRFIRCGMKPE---QIGVITPYEGQRAFLVQHM--QYQGSLPAKIYQEIEVASVDAF 863
+I T ++ + + +GVI+PY+ Q + + + + +Y S+ ++ + V SVD F
Sbjct: 576 EILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYT-SVSDNLFT-LNVRSVDGF 633
Query: 864 QGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
QG E+D+II+S VRSN + IGFL++ +R NVALTRA++ + VIGN + LS
Sbjct: 634 QGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTLS 684
Score = 94 (38.1 bits), Expect = 7.1e-37, Sum P(2) = 7.1e-37
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
+ LI GPPGTG T T AT+++ L+ + V VC P+N AV + ++
Sbjct: 132 VKLIWGPPGTGNTKTVATLLFALLSLSCKTV-VCTPTNTAVVAVASRL 178
Score = 39 (18.8 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 485 DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGT 530
D V HLPK F + N D+ ++ + A + A+++ + +Q G+
Sbjct: 325 DMVDLYTHLPKSFLSSN--DV-KNMIVA-RQALRQARTFLQEKQGS 366
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 367 (134.2 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 108/327 (33%), Positives = 165/327 (50%)
Query: 629 YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA 688
YR + A K L+ VI CTC A L + ILIDE+ ATEPE ++P++ +
Sbjct: 2614 YRRVLGKARKYELERHSVILCTCSCAASGSLKALNVRQILIDEAGMATEPETLIPLVCFS 2673
Query: 689 K--QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
K +++L+GDH QL PVV ++ G+ +SLFER I L+ QYRMH ++ FP
Sbjct: 2674 KTEKVVLLGDHKQLRPVVKNEQLRNLGMDRSLFERYHRDAIM---LDTQYRMHKDICSFP 2730
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN 806
S FY G L+ +D ++ + P++F QG E+ T N +N
Sbjct: 2731 SMEFYGGKLKTW--SDLKRPPSLLGHVGKQSCPVIFGSVQGYEQKLLVSTEEGNENSRAN 2788
Query: 807 VEKIT--TRFIRC-----GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
E++T R I+ + P+ + V+TPY Q A + + + +G + V S
Sbjct: 2789 PEEVTEVVRIIKQLTLDRTVDPKDVAVLTPYNAQAAAISRGLMQRG------VTGVTVTS 2842
Query: 860 VDAFQGREKDLIIMS----CVRSNDHQG---------IGFLNDPRRLNVALTRAKYGIIV 906
+ QG E +I+S C RS+ Q +GF+ DP ++NVA+TRA+ G+ +
Sbjct: 2843 ITKSQGSEWRYVIVSTVRTCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCI 2902
Query: 907 IGNPKVLSKQPLWNNLLNFYKEQKVLV 933
IG+ +L PLW+ LL F + Q LV
Sbjct: 2903 IGDHLLLRCCPLWHRLLGFCEAQNSLV 2929
Score = 149 (57.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 73/284 (25%), Positives = 120/284 (42%)
Query: 664 FHSILIDESMQATEPECMVPV--ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F I IDE+ Q E E ++P+ L +++L GDH Q+ P + +A L R
Sbjct: 906 FSHIFIDEAAQMLECEALIPLSYALTLTRVVLAGDHMQVTPRLFSVPRDKAA-GHMLLHR 964
Query: 722 LVVLGIRPFRLEV-QYRMHPELSKFPSNFFYEGSLQNGVCAD--ERKLSKIDFPWPVPDK 778
L + ++ EV + H + F N+ ++ N V K + I VP
Sbjct: 965 LFLY----YQQEVHKIAQHSRIV-FHENYRSTAAIINFVSRHFYVAKGNPIQASGKVPRH 1019
Query: 779 P----MLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRCGMKPEQIGVITPYEGQ 833
P ++F G E S TS++N E + V EK+ + P G P E +
Sbjct: 1020 PQHYPLMFCHVAGSPEQDMSRTSWLNSAEVTQVVEKVQEIY---NTWPHCWG---PREQR 1073
Query: 834 RAFLVQHMQYQGSLPAKIYQ----EIEVASVDAFQGREKDLIIMSCVRS-NDHQGIG--- 885
V H +L ++ + E+ V S + GRE ++++S V + N G
Sbjct: 1074 HICAVSHGAQVSALRQELRRRNLGEVSVGSFEILPGREFRVVVLSSVHNRNSLLSPGAPT 1133
Query: 886 --FLNDPRRLNVALTRAKYGIIVIGNPKVLSK----QPLWNNLL 923
F +PR LN +TRA+ ++ +G+ L + LW N +
Sbjct: 1134 SEFFTEPRVLNTVMTRAQSQLVAVGDAVALCSSGACRKLWKNFI 1177
Score = 110 (43.8 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 495 KHFSAPN-LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVY 541
K+++ P LN+SQ AV+ A+Q+ ++IQGPPGTGKTV IVY
Sbjct: 2436 KNYNIPGGHHKLNQSQDKAVRSALQKQFTVIQGPPGTGKTVVGFHIVY 2483
Score = 92 (37.4 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 520 PLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD-QLTEKIH 569
PL LI GP GTGKT T A ++V+Q + VL+C +N A D + E H
Sbjct: 784 PL-LIYGPFGTGKTYTLAMAALEVVQQPHTKVLICTHTNSAADIYVREYFH 833
Score = 64 (27.6 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 545 KQTGSP-VLVCAPSNIAVDQLTEKIHR--TGLKVVRVCAKSREAIDSPV 590
++ G P VL C PSN +VD L + R T ++ +RV + EA + P+
Sbjct: 2503 EKLGGPCVLYCGPSNKSVDVLGGLLLRKKTEMRPLRVYGEQAEATEFPL 2551
Score = 55 (24.4 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 231 QRGRQVTSAQIAKLEEVWK--DNAEATFQDLEKPG--VDEDPHQVLL-RYEDGYQYQNIF 285
Q G + +A ++W + +E+PG HQ L +Y + QY ++
Sbjct: 2116 QLGSSLQRGFLAPTLQLWTVVPGFSLCLEHMERPGDCFSGHVHQPLQDQYLEVSQYSGVW 2175
Query: 286 GPLVKLEADYDKRLK-ESQTQENVTVRWD 313
GP LE+ + +S ++V + WD
Sbjct: 2176 GPRCALESLMSAVAENDSIVLQDVHIYWD 2204
Score = 50 (22.7 bits), Expect = 9.4e-30, Sum P(3) = 9.4e-30
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 465 AVDDQSVSAYIYHRLLG---HNVDEVLFRCHLPK---HFSAPNLPDLNRSQVYAVKHAIQ 518
AVDD+S+ + R++G E+ F C + + H P + + V +K Q
Sbjct: 1408 AVDDKSIPGSLLGRVMGVLKRRRRELAFVCRMDEWDPHIMIPINSSVTKIFVAGLKDPQQ 1467
Query: 519 RPLS-LIQG 526
P+ LI+G
Sbjct: 1468 VPIHCLIEG 1476
Score = 41 (19.5 bits), Expect = 3.4e-35, Sum P(4) = 3.4e-35
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 335 QYQNIFGPLVKLEADYDKRLK-ESQTQENVTVRWD 368
QY ++GP LE+ + +S ++V + WD
Sbjct: 2170 QYSGVWGPRCALESLMSAVAENDSIVLQDVHIYWD 2204
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 364 (133.2 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 112/340 (32%), Positives = 175/340 (51%)
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPR--LLKIKFHSILIDESMQATEPECMVPV 684
+R L+ + +L +A V+ T GA R L K++ ++++E+ + E + +
Sbjct: 961 ERMAELRLQEDLHILKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATL 1020
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRPF-RLEVQYRMHPEL 742
+ LIL+GDH QL P A+ L SLFERLV + I PF RL Q+RM PE+
Sbjct: 1021 SKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNI-PFVRLNYQHRMCPEI 1079
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG--QEEIAGSGTSYVN 800
++ + Y+ L+N K KI V LF+V ++EI G S+ N
Sbjct: 1080 ARLLTPHIYQ-DLENHPSV--LKYEKIK---GVSSN--LFFVEHNFPEQEIQ-EGKSHQN 1130
Query: 801 RTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASV 860
+ EA V ++ F+ P QI ++T Y GQ F ++ + +PAK + + V V
Sbjct: 1131 QHEAHFVVELCKYFLCQEYLPSQITILTTYTGQ-LFCLRKL-----MPAKTFAGVRVHVV 1184
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
D +QG E D+I++S VRSN +GFL R+ VAL+RAK G+ IGN ++L+K PLW+
Sbjct: 1185 DKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWS 1244
Query: 921 NLLNFYKEQKVLVEGPL-----NNLKESLILFSKPKQYFK 955
+++ +E + GP+ N E+ L SK + K
Sbjct: 1245 KIIHTLRENNQI--GPMLRLCCQNHPETHTLVSKASDFQK 1282
Score = 125 (49.1 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 39/113 (34%), Positives = 57/113 (50%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS--------PVLVCAP 556
L+ SQ+ A++ A+ R L++IQGPPGTGKT IV L+ P+LV
Sbjct: 598 LDDSQMEALQFALTRELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQKFPILVVCY 657
Query: 557 SNIAVDQLTEKIHRTG-LKVVRVCAKSREAIDSPVSFLALHNQI---RNMEMN 605
+N A+DQ E I+ +VRV +S I + L N+ RN+ M+
Sbjct: 658 TNHALDQFLEGIYNCQKTSIVRVGGRSNSEILKQFTLRELRNKREFRRNLPMH 710
Score = 50 (22.7 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 20/85 (23%), Positives = 41/85 (48%)
Query: 222 VKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQ--DLEKPGVDEDPHQVLLRYEDGY 279
+K + E ++ +T+A+ ++E+VW+ + + +Q L D + +L YE
Sbjct: 897 MKKRVKDELRKLNTMTAAEANEIEDVWQLDLSSRWQLYRLWLQLYQADTRRKILSYER-- 954
Query: 280 QYQNIFGPLVKLEADYDKR-LKESQ 303
QY+ + +L D LK++Q
Sbjct: 955 QYRTSAERMAELRLQEDLHILKDAQ 979
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 251 (93.4 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 72/207 (34%), Positives = 110/207 (53%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQG 787
+L YR H L PS FY L+ VCAD + ++ + W +P K P++F+ +G
Sbjct: 332 KLVKNYRSHSALLALPSRLFYHRELE--VCADPKVVTSL-LGWEKLPRKGFPLIFHGVRG 388
Query: 788 QEEIAGSGTSYVNRTEASNVEK---ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
E G S+ + EA V + + R + + + IGVITPY Q V+ ++
Sbjct: 389 NEAREGRSPSWFSPAEAVQVMRYCCLLARNVSSQVSSKDIGVITPYRKQ----VEKIKIL 444
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN------DHQGIGFLNDPRRLNVALT 898
L +I+V SV+ FQG+E +I++S VRSN D +GFL++ +R NVA+T
Sbjct: 445 --LRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAIT 502
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNF 925
R K +IV+GNP VL + P + LL +
Sbjct: 503 RPKALLIVLGNPHVLVRDPCFGALLEY 529
Score = 137 (53.3 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 646 VICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK---QLILVGDHCQ 699
+I TC AG + ++ F + +DE+ QA+EPEC++P+ L + Q++L GD Q
Sbjct: 224 IIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQ 283
Query: 700 LGPVVMCKKAARAGLSQSLFERLV 723
LGPV+ + A GL+ S+ ERL+
Sbjct: 284 LGPVIKSRLAMAYGLNVSMLERLM 307
Score = 131 (51.2 bits), Expect = 2.0e-36, Sum P(3) = 2.0e-36
Identities = 37/86 (43%), Positives = 48/86 (55%)
Query: 503 PDLNRSQVYAVKHAIQ---RPLSLIQ-GPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPS 557
P LN +Q AV+ + RPL I GPPGTGKTVT V Q+ S +LVCAPS
Sbjct: 108 PVLNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPS 167
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR 583
N A D + ++H + KV++ A R
Sbjct: 168 NSAADLVCLRLHES--KVLKPAAMVR 191
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 391 (142.7 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 111/348 (31%), Positives = 179/348 (51%)
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLK-------IKFHSILIDESMQATEPECMVPVIL 686
+ + +++ + +ICCT +G L + F +++DE+ Q+ E E + P+I
Sbjct: 2132 QKTQNTIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIH 2191
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSL---FERLV-------VLGIRPF-RLEVQ 735
+L+LVGD QL P V+ KA G QS+ F +L+ V+G P +L VQ
Sbjct: 2192 RCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMARFYKLLEENVEHNVIGRLPILQLTVQ 2251
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQGQEEIAGS 794
YRMHP++ FPSN+ Y +L+ + + S D WP +P L F V G E
Sbjct: 2252 YRMHPDICLFPSNYIYNRNLKTNSLTEASRCSS-D--WPF--QPYLVFDVGDGSER--RD 2304
Query: 795 GTSYVNRTEASNVEKITT--RFIRCGMKPEQIGVITPYEGQRAFLVQHM--QYQGSLPAK 850
SYVN E V +I + R + IG+IT Y+ Q+ + + + ++ PA
Sbjct: 2305 NDSYVNVQEIKLVMEIIKLIKDKRRDVTFRNIGIITHYKAQKTLIQKDLDKEFDRKGPA- 2363
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIGN 909
EV +VD FQGR+KD +I++CVR+ QG IGFL +RLNV +TRAKY + ++G+
Sbjct: 2364 -----EVDTVDGFQGRQKDCVIVTCVRAKTSQGSIGFLASLQRLNVTITRAKYSLFILGH 2418
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
+ L + WN L+ +++ +++ N + KPK +++
Sbjct: 2419 LRTLRENDHWNQLIEDAQKRGAIIKTCDKNYRHDATKILKPKPVLQRS 2466
Score = 103 (41.3 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 513 VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT---G------------SPVLVCAP 556
VKH+ + LI GPPGTGK+ T ++Y+L+ + G + VLVCAP
Sbjct: 1943 VKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQNRVLVCAP 2002
Query: 557 SNIAVDQLTEKI 568
SN AVD+L +KI
Sbjct: 2003 SNAAVDELMKKI 2014
Score = 76 (31.8 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 511 YA-VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
YA VKH+ + LI GPPGTGK+ T ++Y+L+ + SN + Q
Sbjct: 1940 YAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRRGHSDENSNAKIKQ----- 1994
Query: 569 HRTGLKVVRVCAKSREAID 587
+R V VCA S A+D
Sbjct: 1995 NR-----VLVCAPSNAAVD 2008
Score = 46 (21.3 bits), Expect = 3.7e-36, Sum P(3) = 3.7e-36
Identities = 26/99 (26%), Positives = 39/99 (39%)
Query: 242 AKLEEV--WKDNAEATFQDLEKP-GVDED-PHQVLLRYEDGYQYQNIFGPLVKLEADYDK 297
A ++EV WK F P G+ + +V +R++D Y ++F PL+ L
Sbjct: 1695 AFVKEVLKWKYEMFVNFDQCGPPSGLCQAIARRVPVRFQDCGDYFSVFFPLMILN----- 1749
Query: 298 RLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQY 336
T E V W NK+ L K D +Y
Sbjct: 1750 ------TFETVAQEWISSPNKEKFHQLHLRKFPADYKKY 1782
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 380 (138.8 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 94/269 (34%), Positives = 143/269 (53%)
Query: 667 ILIDESMQATEPECMVPVIL-GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 725
++IDE+ Q E E +P+ L G + LILVGD QL +V + A AG +SLFERL +L
Sbjct: 567 LVIDEAAQLKECESSIPMQLPGLRHLILVGDERQLPAMVESQIALEAGFGRSLFERLALL 626
Query: 726 GIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT 785
G + + L +QYRMH +S FP+ Y + + +R +K P + +
Sbjct: 627 GHKKYMLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGPYSFINIA 686
Query: 786 QGQEEIA-GSGTSYVNRTEASNVEKITTRFIRCGMKPE---QIGVITPYEGQRAFLVQHM 841
G+EE G G S N E V I ++ K + +GVI+PY+ Q + + +
Sbjct: 687 YGREEYGEGEGRSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKI 746
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAK 901
Q A + + +VD FQG E+D+II+S VRSN +GFL + RR NV LTRA+
Sbjct: 747 QETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGVGRVGFLGNRRRTNVLLTRAR 806
Query: 902 YGIIVIGNPKVL-SKQPLWNNLLNFYKEQ 929
+ + ++GN L + + +W NL+ KE+
Sbjct: 807 FCLWILGNEATLMNSKSVWRNLIQDAKER 835
Score = 97 (39.2 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 494 PKHFSA--PNLPD--LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGS 549
P+ F P+ D LN V HA + LI GPPGTGKT T++ +++ L+
Sbjct: 232 PRRFLKLNPSQEDAILNCLDVRRCYHA--NTVRLIWGPPGTGKTKTTSVLLFTLLNAK-C 288
Query: 550 PVLVCAPSNIAVDQLTEKI 568
L C P+N++V ++ ++
Sbjct: 289 RTLTCGPTNVSVLEVASRV 307
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 374 (136.7 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 104/319 (32%), Positives = 163/319 (51%)
Query: 636 AEKSLLDNAD-VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILV 694
+E L N + V+ TC+G P + +F ++DE+ Q ++P C+ P+ A++ +LV
Sbjct: 733 SELEQLYNKELVVGTTCLGIRHPLFTRRRFDFCIVDEASQISQPVCVGPLFY-ARRFVLV 791
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
GDH QL P+V ++A G+ +SLF+RL + +L VQYRM+ ++ ++ YEG
Sbjct: 792 GDHQQLPPIVQNQEARSLGMDESLFKRLELHRDAVVQLNVQYRMNRQIMSLSNSLMYEGR 851
Query: 755 LQNGVCADERKL-SKIDFP-------------WP----VPDKPMLFYVTQGQEEIAGSGT 796
L+ C ER S I P W +P P+ F +
Sbjct: 852 LE---CGSERTATSLITLPLLPSVLPELGSLAWIQATLLPSNPVCFLDCSAVPALETVEQ 908
Query: 797 SYV-NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
+ N TEA+ + K+ I+ G KP IGVI PY Q + G L A + +
Sbjct: 909 GGISNHTEAALIHKLLLLLIKAGCKPGDIGVIAPYRQQLRTI------SGLLQASAFTGV 962
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQG-IG-FLNDPRRLNVALTRAKYGIIVIGNPKVL 913
EV +VD +QGR+K LI++S VRS +G +G L D RRLNVA+TRAK ++++G+ L
Sbjct: 963 EVNTVDRYQGRDKSLILLSFVRSTAEEGPLGELLKDWRRLNVAITRAKSKLLMLGSATTL 1022
Query: 914 SKQPLWNNLLNFYKEQKVL 932
+ LLN + + ++
Sbjct: 1023 RRYAPVEKLLNHLQRENLI 1041
Score = 101 (40.6 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVL 552
P H LN+ Q A+K + + +LI G PGTGKT T T+V +++ G VL
Sbjct: 622 PAHLVHVGGAGLNKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILHACGFSVL 680
Query: 553 VCAPSNIAVDQLTEKIHRTGLKVVRV 578
+ + ++ AVD + K+ R + +R+
Sbjct: 681 LTSYTHSAVDNILLKLKRFRVGFLRL 706
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 256 (95.2 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 75/208 (36%), Positives = 110/208 (52%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQG 787
+L YR H L PS FY L+ VCAD + ++ + W +P K P++F+ +G
Sbjct: 965 KLVKNYRSHSALLALPSRLFYHRELE--VCADPKVVTSL-LGWEKLPRKGFPLVFHGVRG 1021
Query: 788 QEEIAGSGTSYVNRTEASNVEK---ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
E G S+ N TEA V + + R + + IGVITPY Q + ++
Sbjct: 1022 TEAREGRSPSWFNPTEAVQVMRYCCLLARSVSSQVSAGDIGVITPYRKQVEKIKILLRNV 1081
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN------DHQGIGFLNDPRRLNVALT 898
G E++V SV+ FQG+E +II+S VRSN D +GFL++ +R NVA+T
Sbjct: 1082 G------LAEVKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAIT 1135
Query: 899 RAKYGIIVIGNPKVLSKQ-PLWNNLLNF 925
R K +IV+GNP VL +Q P + LL +
Sbjct: 1136 RPKALLIVLGNPHVLVRQDPCFGALLEY 1163
Score = 137 (53.3 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 646 VICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK---QLILVGDHCQ 699
V+ TC AG + ++ F + +DE+ QA+EPEC++P+ L + Q+IL GD Q
Sbjct: 857 VVITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLISDIDGQIILAGDPMQ 916
Query: 700 LGPVVMCKKAARAGLSQSLFERLV 723
LGPV+ + A GL+ S+ ERL+
Sbjct: 917 LGPVIKSRLAMAYGLNVSMLERLM 940
Score = 137 (53.3 bits), Expect = 9.1e-36, Sum P(3) = 9.1e-36
Identities = 40/90 (44%), Positives = 51/90 (56%)
Query: 503 PDLNRSQVYAVKHAIQ---RPLSLIQ-GPPGTGKTVTSATIVYQLVKQT-GSPVLVCAPS 557
P LN +Q AVK + RPL + GPPGTGKTVT V Q+ S +LVCAPS
Sbjct: 741 PMLNENQQLAVKRILSGDCRPLPYVLFGPPGTGKTVTVIEAVLQVFHALPDSRILVCAPS 800
Query: 558 NIAVDQLTEKIHRT-GLK---VVRVCAKSR 583
N A D + ++H + GL+ +VRV A R
Sbjct: 801 NSAADLVCLRLHESRGLRPGAMVRVNATCR 830
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 381 (139.2 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 111/349 (31%), Positives = 178/349 (51%)
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLK-------IKFHSILIDESMQATEPECMVPVIL 686
+ + ++ + +ICCT +G L + F +++DE+ Q+ E E + P+I
Sbjct: 2138 QKTQSIIILESHIICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIH 2197
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSL---FERLVVLGIR-------PF-RLEVQ 735
+LILVGD QL P V+ KA G QS+ F RL+ + P +L VQ
Sbjct: 2198 RCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQ 2257
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQGQEEIAGS 794
YRMHP++ FPSN+ Y +L+ + + S WP +P L F V G E
Sbjct: 2258 YRMHPDICLFPSNYVYNRNLKTNRQTEAIRCSS---DWPF--QPYLVFDVGDGSER--RD 2310
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKP---EQIGVITPYEGQRAFLVQHM--QYQGSLPA 849
SY+N E V +I + I+ K IG+IT Y+ Q+ + + + ++ PA
Sbjct: 2311 NDSYINVQEIKLVMEII-KLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPA 2369
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIG 908
EV +VDAFQGR+KD +I++CVR+N QG IGFL +RLNV +TRAKY + ++G
Sbjct: 2370 ------EVDTVDAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILG 2423
Query: 909 NPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
+ + L + WN L+ +++ +++ N + + K K +++
Sbjct: 2424 HLRTLMENQHWNQLIQDAQKRGAIIKTCDKNYRHDAVKILKLKPVLQRS 2472
Score = 103 (41.3 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 513 VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT---G------------SPVLVCAP 556
VKH+ + LI GPPGTGK+ T ++Y+L+ + G + VLVCAP
Sbjct: 1949 VKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAP 2008
Query: 557 SNIAVDQLTEKI 568
SN AVD+L +KI
Sbjct: 2009 SNAAVDELMKKI 2020
Score = 77 (32.2 bits), Expect = 6.5e-33, Sum P(2) = 6.5e-33
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 511 YA-VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
YA VKH+ + LI GPPGTGK+ T ++Y+L+ + SN + Q
Sbjct: 1946 YAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQ----- 2000
Query: 569 HRTGLKVVRVCAKSREAID 587
+R V VCA S A+D
Sbjct: 2001 NR-----VLVCAPSNAAVD 2014
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 360 (131.8 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 111/341 (32%), Positives = 178/341 (52%)
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPR--LLKIKFHSILIDESMQATEPECMVPV 684
+R L+ + +L +A+V+ T GA R L +++ ++++E+ + E + +
Sbjct: 954 ERMAELRLQEDLHILKDAEVVGMTTTGAAKYRQILQQVEPRIVIVEEAAEVLEAHTIATL 1013
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRPF-RLEVQYRMHPEL 742
+ LIL+GDH QL P A+ L SLFERLV + I PF RL Q+RM PE+
Sbjct: 1014 SKACQHLILIGDHQQLRPSANVYDLAKNFNLEVSLFERLVKVNI-PFVRLNYQHRMRPEI 1072
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQG--QEEIAGSGTSYVN 800
++ + Y+ L+N K +I V LF+V ++EI G S+ N
Sbjct: 1073 ARLLTPHIYQ-DLENHPSV--LKYEQIK---GVSSN--LFFVEHNFPEQEIQ-EGKSHQN 1123
Query: 801 RTEASNVEKITTRFIRCG-MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
+ EA V ++ +++ C P QI ++T Y GQ F ++ + +P K + I+V
Sbjct: 1124 QHEAHFVVELC-QYLLCQEYLPSQITILTTYTGQ-LFCLRKL-----MPVKTFAGIKVHV 1176
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLW 919
VD +QG E D+I++S VRSN +GFL P R+ VAL+RAK G+ IGN ++L+K PLW
Sbjct: 1177 VDKYQGEENDIILLSLVRSNQEGKVGFLQIPNRICVALSRAKKGMYCIGNMQMLAKVPLW 1236
Query: 920 NNLLNFYKEQKVLVEGP-----LNNLKESLILFSKPKQYFK 955
+ +++ +E + GP N E+ L SK + K
Sbjct: 1237 SRIIHTLRENNQI--GPSLRLCCQNHPETHTLVSKASDFQK 1275
Score = 121 (47.7 bits), Expect = 1.3e-35, Sum P(2) = 1.3e-35
Identities = 37/104 (35%), Positives = 55/104 (52%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIV---------YQLVKQTGSPVLVCA 555
L+ SQ+ A++ A+ + L++IQGPPGTGKT IV +Q+ QT P+LV
Sbjct: 591 LDDSQMEALQFALTKELAIIQGPPGTGKTYVGLKIVQALLTNKSVWQINTQT-FPILVVC 649
Query: 556 PSNIAVDQLTEKIHRTG-LKVVRVCAKSREAIDSPVSFLALHNQ 598
+N A+DQ E I+ +VRV +S I + L N+
Sbjct: 650 YTNHALDQFLEGIYGCQKTSIVRVGGRSNSEILKQFTLRELRNK 693
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 384 (140.2 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 114/343 (33%), Positives = 177/343 (51%)
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLK-------IKFHSILIDESMQATEPECMVPVIL 686
+ + ++ + VICCT +G L + F +++DE+ Q+ E E + P+I
Sbjct: 2161 QKTQSIIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIH 2220
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSL---FERLV-------VLGIRP-FRLEVQ 735
+LILVGD QL P V+ KA G QS+ F +L+ ++G P +L VQ
Sbjct: 2221 RCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFYKLLEDNVEHNMIGRLPVLQLTVQ 2280
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQGQEEIAGS 794
YRMHP++ FPSN+ Y SL+ + + S WP +P L F V G E
Sbjct: 2281 YRMHPDICLFPSNYVYNRSLKTNRQTETNRCSS---DWPF--QPYLVFDVGDGSER--RD 2333
Query: 795 GTSYVNRTEASNVEKITT--RFIRCGMKPEQIGVITPYEGQRAFLVQHM--QYQGSLPAK 850
SYVN E V +I + R + IG+IT Y+ Q+ + + + ++ PA
Sbjct: 2334 NDSYVNVQEIKLVMEIIKLIKDKRRDVTFRNIGIITHYKAQKTMIQKDLDKEFDRKGPA- 2392
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIGN 909
EV +VD FQGR+KD +I++CVR+N QG IGFL +RLNV +TRAKY + ++G+
Sbjct: 2393 -----EVDTVDGFQGRQKDCVIVTCVRANAMQGSIGFLASLQRLNVTITRAKYSLFILGH 2447
Query: 910 PKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL--ILFSKP 950
+ L + WN+L+ +++ +++ N + IL KP
Sbjct: 2448 LRTLMENQHWNHLIQDAQKRGAIIKTCDKNYRHDAAKILKLKP 2490
Score = 103 (41.3 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 513 VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT---G------------SPVLVCAP 556
VKH+ + LI GPPGTGK+ T ++Y+L+ + G + VLVCAP
Sbjct: 1972 VKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAP 2031
Query: 557 SNIAVDQLTEKI 568
SN AVD+L +KI
Sbjct: 2032 SNAAVDELMKKI 2043
Score = 77 (32.2 bits), Expect = 8.1e-32, Sum P(4) = 8.1e-32
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 511 YA-VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKI 568
YA VKH+ + LI GPPGTGK+ T ++Y+L+ + SN + Q
Sbjct: 1969 YAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQ----- 2023
Query: 569 HRTGLKVVRVCAKSREAID 587
+R V VCA S A+D
Sbjct: 2024 NR-----VLVCAPSNAAVD 2037
Score = 47 (21.6 bits), Expect = 1.4e-35, Sum P(3) = 1.4e-35
Identities = 23/91 (25%), Positives = 30/91 (32%)
Query: 248 WKDNAEATFQDLEKPG--VDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQ 305
WK F P V +R++D Y N+F PL+ L T
Sbjct: 1731 WKYEMFVNFDQCGPPASLCQSISRPVPVRFQDCGDYFNVFFPLMILN-----------TF 1779
Query: 306 ENVTVRWDVGLNKKSIAYFSLAKTDGDGYQY 336
E V W NK+ L K D +Y
Sbjct: 1780 ETVAQEWISSPNKEKFYQLHLRKFPADYKKY 1810
Score = 46 (21.3 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
Identities = 15/67 (22%), Positives = 36/67 (53%)
Query: 347 EADYDKRLKESQTQENVT-----VRWD-VGLNKKSIA-YFSLAKTDGDMRLMQGDELKLR 399
++D D E + +E + ++ D +G+ K+ + + S+A T+ + +LM+ +E L+
Sbjct: 1028 DSDDDDDDDEEEEEEGILGFEKPIKQDKIGIKKEYLKQHTSIASTNVEKKLMKEEETLLQ 1087
Query: 400 YSYDASK 406
+ S+
Sbjct: 1088 FEESDSQ 1094
Score = 38 (18.4 bits), Expect = 1.7e-34, Sum P(4) = 1.7e-34
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 458 QLALRKFAVDDQSVSAYIYH 477
QL LRKF D + ++ H
Sbjct: 1797 QLHLRKFPADYKKYWEFVVH 1816
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 377 (137.8 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 110/349 (31%), Positives = 178/349 (51%)
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLK-------IKFHSILIDESMQATEPECMVPVIL 686
+ A+ +++ + VICCT +G L + F +++DE+ Q+ E E + P+I
Sbjct: 2114 QRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIH 2173
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV----------VLGIRP-FRLEVQ 735
+LILVGD QL P V+ KA G QS+ R ++G P +L +Q
Sbjct: 2174 RCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVEQNMIGRLPVLQLTIQ 2233
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQGQEEIAGS 794
YRMHP++ FPSN+ Y +L+ + + S WP +P L F V G E
Sbjct: 2234 YRMHPDICLFPSNYVYNKNLKTNRLTESIRCSS---EWPF--QPYLVFDVGDGSER--RD 2286
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKP---EQIGVITPYEGQRAFLVQHMQ--YQGSLPA 849
SY+N E V +I + I+ K IG+IT Y+ Q+ + + ++ + PA
Sbjct: 2287 NDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPA 2345
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIG 908
EV +VDAFQGR+KD II++CVR++ QG IGFL +RLNV +TRAKY + ++G
Sbjct: 2346 ------EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILG 2399
Query: 909 NPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
+ + L + W L+ +++ +++ N + + K K +++
Sbjct: 2400 HLRTLMENQHWYELIQDAQKRGAIIKTSDPNYRHDAMKILKLKPVLQRS 2448
Score = 103 (41.3 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 513 VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT---G------------SPVLVCAP 556
VKH+ + LI GPPGTGK+ T ++Y+L+ + G + VLVCAP
Sbjct: 1925 VKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAP 1984
Query: 557 SNIAVDQLTEKI 568
SN AVD+L +KI
Sbjct: 1985 SNAAVDELMKKI 1996
Score = 75 (31.5 bits), Expect = 3.0e-32, Sum P(3) = 3.0e-32
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 502 LPDLNRSQ------VYA-VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
L D N Q YA VKH+ + LI GPPGTGK+ T ++Y+L+ +
Sbjct: 1907 LKDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRK--- 1963
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAID 587
S+ + KI + V VCA S A+D
Sbjct: 1964 -GHSD---ENFNAKIKQNR---VLVCAPSNAAVD 1990
Score = 51 (23.0 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 271 VLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
V +R++D +Y N+F PL+ L A E V W NK++ L K
Sbjct: 1714 VPVRFQDCAEYFNVFLPLIILNAF-----------ETVAQEWLSSPNKENFYQLQLRKFP 1762
Query: 331 GDGYQYQNIFGPLVKL-EADYDKRL 354
D Y+ + L+ L E++ K+L
Sbjct: 1763 AD---YKKYWEFLIYLNESELAKQL 1784
Score = 39 (18.8 bits), Expect = 6.5e-34, Sum P(3) = 6.5e-34
Identities = 14/75 (18%), Positives = 30/75 (40%)
Query: 237 TSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYD 296
T + K+ ++N + + DL + + P ++ L+ + + VK+ A+
Sbjct: 652 THRVLMKVNTTEEENFKQHYIDLNEEEQEPLPAELCLKQKSEALFSESAQEQVKISAEKS 711
Query: 297 KRLKESQTQENVTVR 311
+ S N T R
Sbjct: 712 GKESSSYAPSNSTSR 726
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 255 (94.8 bits), Expect = 4.6e-35, Sum P(3) = 4.6e-35
Identities = 74/207 (35%), Positives = 110/207 (53%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQG 787
+L YR H L PS FY L+ VCAD +S + W +P K P++F+ +G
Sbjct: 974 KLVNNYRSHSALLALPSKLFYHKELE--VCADTSVVSSL-LHWEKLPRKGFPLIFHGVRG 1030
Query: 788 QEEIAGSGTSYVNRTEASNVEKITTRFIR---CGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
+E G S+ N TEA V + + + IGVITPY Q V+ +++
Sbjct: 1031 KETREGHSPSWFNPTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQ----VEKIKFL 1086
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRS------NDHQGIGFLNDPRRLNVALT 898
L + +I+V +V+ FQG+E + I+S VRS + +GFL++P+R NVA+T
Sbjct: 1087 --LRSIDLSDIKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAIT 1144
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNF 925
RAK +IVIGNP +L K P + LL +
Sbjct: 1145 RAKALLIVIGNPHLLVKDPCFCALLEY 1171
Score = 140 (54.3 bits), Expect = 4.6e-35, Sum P(3) = 4.6e-35
Identities = 41/99 (41%), Positives = 54/99 (54%)
Query: 503 PDLNRSQVYAVKHAIQ---RPLSLIQ-GPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPS 557
P LN+ Q AVK + RP I GPPGTGKT+T + Q+ S +LVCAPS
Sbjct: 750 PMLNKQQKLAVKRILSGECRPTPYILFGPPGTGKTITVVEAILQIHFTLPDSRILVCAPS 809
Query: 558 NIAVDQLTEKIHRTGL----KVVRVCA--KSREAIDSPV 590
N A D + ++H++ L +VRV A +S E ID V
Sbjct: 810 NAATDLICLRLHQSNLLKPGAMVRVNATCRSTEQIDDIV 848
Score = 128 (50.1 bits), Expect = 4.6e-35, Sum P(3) = 4.6e-35
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 646 VICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK---QLILVGDHCQ 699
+I TC AG + F +++DE+ QA+EPE ++P+ L ++ Q++LVGD Q
Sbjct: 866 IIITTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPESLIPIGLISEVNGQIVLVGDPKQ 925
Query: 700 LGPVVMCKKAARAGLSQSLFERLV 723
LGP++ + A GL+ SL ERL+
Sbjct: 926 LGPLIKSRIAVAFGLNISLLERLI 949
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 368 (134.6 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 106/347 (30%), Positives = 179/347 (51%)
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLK--------IKFHSILIDESMQATEPECMVPVI 685
+ + ++ + +ICCT +G LL+ + F +++DE+ Q+ E E + P+I
Sbjct: 2128 QKTQSIIILESHIICCTLSTSGG-LLLEAAFRGQGGVPFSCVIVDEAGQSCEVETLTPLI 2186
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL---FERLV-------VLGIRP-FRLEV 734
+L+LVGD QL P V+ KA G QS+ F +L+ ++G P +L +
Sbjct: 2187 HRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMARFHKLLEESVEHNMIGRLPVLQLTI 2246
Query: 735 QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQGQEEIAG 793
QYRMHP++ FPS++ Y+G L+ + + S WP +P L F V G E
Sbjct: 2247 QYRMHPDICLFPSSYIYDGILRTNRGTETSRCSS---DWPF--QPYLVFDVGDGLER--R 2299
Query: 794 SGTSYVNRTEASNVEKITT--RFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI 851
SYVN E V ++ + R + IG+IT Y+ Q+ + + + +
Sbjct: 2300 DNDSYVNVQEIKLVMELIKLIKDKRRDVTFRNIGIITHYKAQKTMIQKDLDKEFDRKGAA 2359
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIGNP 910
EV +VDAFQGR+KD +I++CVR+N QG IGFL +RLNV +TRAKY + ++G+
Sbjct: 2360 ----EVDTVDAFQGRQKDCVIVTCVRANATQGSIGFLASLQRLNVTITRAKYSLFILGHL 2415
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
+ L + W +L+ +++ +++ N + + K K +++
Sbjct: 2416 RTLVENRHWYHLIQDAQKRGAIIKTCDKNYRHDAMKILKLKPLLQRS 2462
Score = 105 (42.0 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 31/72 (43%), Positives = 41/72 (56%)
Query: 513 VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT---G------------SPVLVCAP 556
VKH+ + LI GPPGTGK+ T I+Y+L+ + G + VLVCAP
Sbjct: 1939 VKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSDENSNAKIKQNRVLVCAP 1998
Query: 557 SNIAVDQLTEKI 568
SN AVD+L +KI
Sbjct: 1999 SNAAVDELMKKI 2010
Score = 55 (24.4 bits), Expect = 8.7e-35, Sum P(3) = 8.7e-35
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 270 QVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKT 329
+V +R++D Y N+F PL+ L T E V W NK+ L K
Sbjct: 1722 RVPIRFQDCGDYFNVFFPLMVLN-----------TFETVAQEWISSPNKEKFHQLHLRKF 1770
Query: 330 DGDGYQY 336
GD +Y
Sbjct: 1771 PGDYKKY 1777
Score = 39 (18.8 bits), Expect = 4.0e-33, Sum P(3) = 4.0e-33
Identities = 16/54 (29%), Positives = 20/54 (37%)
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMR 389
Y N+F PL+ L T E V W NK+ L K GD +
Sbjct: 1733 YFNVFFPLMVLN-----------TFETVAQEWISSPNKEKFHQLHLRKFPGDYK 1775
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 356 (130.4 bits), Expect = 1.2e-34, Sum P(3) = 1.2e-34
Identities = 111/365 (30%), Positives = 178/365 (48%)
Query: 593 LALHNQIRNME--MNSXXXXXXXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCT 650
+ LH++IR +S S D Y+ + A K LD +VI CT
Sbjct: 2281 ITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLWEARKFELDRHEVILCT 2340
Query: 651 CVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL--GAKQLILVGDHCQLGPVVMCKK 708
C A L + IL+DE+ ATEPE ++P++ A++++L+GDH QL PVV ++
Sbjct: 2341 CSCAASASLKILDVRQILVDEAGMATEPETLIPLVQFPQAEKVVLLGDHKQLRPVVKNER 2400
Query: 709 AARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSK 768
GL +SLFER L+ QYRMH + FPS FY+ L+ R S
Sbjct: 2401 LQNLGLDRSLFERYHE---DAHMLDTQYRMHEGICAFPSVAFYKSKLKTWQGL-RRPPSV 2456
Query: 769 IDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKIT-----TRFIRCG--MKP 821
+ P++F QG E T N +N+E++ T+ + G ++P
Sbjct: 2457 LGHAGK-ESCPVIFGHVQGHERSLLVSTDEGNENSKANLEEVAEVVRITKQLTLGRTVEP 2515
Query: 822 EQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS----CVR 877
+ I V+TPY Q + + + ++ +G + V+S+ QG E +++S C +
Sbjct: 2516 QDIAVLTPYNAQASEISKALRREG------IAGVAVSSITKSQGSEWRYVLVSTVRTCAK 2569
Query: 878 SNDHQG---------IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
S+ Q +GF+ DP ++NVA+TRA+ G+ +IG+ +L PLW +LL+F +
Sbjct: 2570 SDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDHLLLRCCPLWRSLLDFCEA 2629
Query: 929 QKVLV 933
Q+ LV
Sbjct: 2630 QQTLV 2634
Score = 174 (66.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 123/481 (25%), Positives = 193/481 (40%)
Query: 491 CHLPKHFSAPNLPDLNRSQVYAVKHAI-------QR-PLSLIQGPPGTGKTVTSATIVYQ 542
C LP+ +S P L NR Q AV +R P LI GP GTGKT T A +
Sbjct: 501 CALPRPWSVPPLRRGNRKQELAVALIAGWGPGDGRRVPPLLIYGPFGTGKTYTLAMASLE 560
Query: 543 LVKQTGSPVLVCAPSNIAVD-QLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRN 601
++++ + VL+C +N A D + E H V EA +P+ + +
Sbjct: 561 VIRRPETKVLICTHTNSAADIYIREYFHS------HVSGGHPEA--TPLRVMYTDRPLSQ 612
Query: 602 MEMNSXXXXXXXXXXXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK 661
+ + D + +R + AE L V+ T A + R+
Sbjct: 613 TDPVTLQYCCLTD----------DRQAFRPPTR-AE---LARHRVVVTTTSQARELRVPV 658
Query: 662 IKFHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
F ILIDE+ Q E E + P+ + +L+L GDH Q+ P + ARA +L
Sbjct: 659 GFFSHILIDEAAQMLECEALTPLAYASHGTRLVLAGDHMQVTPRLFSVARARAA-EHTLL 717
Query: 720 ERLVVLG-------IRPFRL--EVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
RL + R RL YR + F S FY N + A K+
Sbjct: 718 HRLFLCYQQETHEVARQSRLVFHENYRCTDAIVSFISRHFYVAK-GNPIHAR----GKVP 772
Query: 771 FPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTE-ASNVEKITTRFIR---C-GMKPEQIG 825
P P P++F G + S S++N E A VEK+ + C G + ++
Sbjct: 773 -PHP-RHYPLMFCHVAGSPDRDMSMASWLNLAEIAQVVEKVQEAYNTWPSCWGGREQRCI 830
Query: 826 VITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH---Q 882
+ + Q + L Q ++ + ++ V S + GR+ ++++S V +
Sbjct: 831 CVVSHGAQVSALRQELRRRD------LGQVSVGSFEILPGRQFRVVVLSTVHTCQSLLSP 884
Query: 883 GI---GFLNDPRRLNVALTRAKYGIIVIGNPKVLSK----QPLWNNLLNFYKEQ-KVLVE 934
G F D R LN LTRA+ ++V+G+ L LW + + E+ V E
Sbjct: 885 GALAPEFFTDARVLNTVLTRAQSQLVVVGDAVALCSFGACGKLWESFIRECVERHSVCPE 944
Query: 935 G 935
G
Sbjct: 945 G 945
Score = 127 (49.8 bits), Expect = 1.2e-34, Sum P(3) = 1.2e-34
Identities = 49/173 (28%), Positives = 76/173 (43%)
Query: 441 TGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHF--- 497
T F+V+ + K R + A+R + S + LG V + L R +P F
Sbjct: 2087 TLFTVELLPKQLPDLRKEEAVRGL----EEASPLVTSIALGRPVPQPLCRV-IPSRFLER 2141
Query: 498 SAPNLPD----LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
N+P LN SQ AV+ A+++P ++IQGPPGTGKT+ IV+ K V
Sbjct: 2142 QTYNIPGGRHKLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQP 2201
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNS 606
P EK R G + C S +++D L +++ + + S
Sbjct: 2202 GGPPR------GEK--RLGGPCILYCGPSNKSVDVLAGLLLRRMELKPLRVYS 2246
Score = 44 (20.5 bits), Expect = 1.2e-34, Sum P(3) = 1.2e-34
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 274 RYEDGYQYQNIFGPLVKLEADYDKRLK-ESQTQENVTVRWD 313
RY D +Y ++ P LE+ + +S T ++++V W+
Sbjct: 1934 RYRDVDEYACVWEPFCALESATGAVAENDSVTLQHLSVSWE 1974
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 398 (145.2 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 116/350 (33%), Positives = 181/350 (51%)
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI-------KFHSILIDESMQATEPE 679
K R + + ++ +D+ICCT +G L F +++DE+ Q+ E E
Sbjct: 2154 KEVRGHSQKVQTDIILESDIICCTLSTSGGGLLESAFWRQGLDPFSCVIVDEAGQSCEVE 2213
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV----------VLGIRP 729
++P+I +L+LVGD QL P + KA G QSL RL +L P
Sbjct: 2214 TLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLMARLQRHLEEQVQNNLLRRLP 2273
Query: 730 F-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQG 787
+L VQYRMHP++ FPS++ Y+ +L+ +E + S WP +P L F V G
Sbjct: 2274 VVQLTVQYRMHPDICLFPSSYIYDKTLKTDKATEENRCSS---EWPF--QPYLVFDVGDG 2328
Query: 788 QEEIAGSGTSYVNRTEASNVEKI--TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ--Y 843
EE S+ N E V +I T + R + +IG+ITPY Q+ + + + +
Sbjct: 2329 HEE--RDKDSFSNPQEVKLVLEIIRTIKEKRKDLGLRRIGIITPYSAQKKKIQEELDRVF 2386
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKY 902
+ + P EV +VDAFQGREKD II++CVR+N +G IGFL +RLNV +TRA++
Sbjct: 2387 KNNSPG------EVDTVDAFQGREKDCIIVTCVRANSSKGSIGFLASLQRLNVTITRARF 2440
Query: 903 GIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVE-GPLNNLKESL-ILFSKP 950
+ ++G K L + WN L+ + + +++ + K++L IL KP
Sbjct: 2441 SLFILGRLKTLMENKDWNKLIQDAQRRGAIIKTSDKSYKKDALKILKLKP 2490
Score = 86 (35.3 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 511 YAV--KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTG--------------SPVLVC 554
YA+ +H + LI GPPGTGK+ T ++ +++++ + LVC
Sbjct: 1970 YAMVKQHPGLAKICLIHGPPGTGKSKTIVGLLSRVLRENTRNEKTSKKNAKIKQNRFLVC 2029
Query: 555 APSNIAVDQLTEKI 568
APSN A+D+L +KI
Sbjct: 2030 APSNAAIDELMKKI 2043
Score = 39 (18.8 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 271 VLLRYEDGYQ-YQNIFGPLVKLEA 293
V +R++ GY Y N F PL+ L A
Sbjct: 1757 VPIRFQ-GYNDYFNTFFPLMMLNA 1779
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 407 (148.3 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 140/438 (31%), Positives = 207/438 (47%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC----APSNIA--VDQLTEKIHRT 571
Q+ L++I GPPGTGKT T I+ Q VK+ + A N+ + Q ++I R
Sbjct: 203 QKELAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAPSNVAVDNLVERLAQWKQRILRL 262
Query: 572 GLKVVRVCAKSREAIDSPVS---FLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADE-K 627
G + + + ++D+ ++ + IR +++ + DE K
Sbjct: 263 GHPARLLDSIQQHSLDAVLARSDSARIVADIRR-DIDQAWAKNRKTQDKREKSNFRDEIK 321
Query: 628 RYRM-LKKNAEKSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEPE 679
R LK E ++L++ A V+ T GA LK+ F ++IDE QA E
Sbjct: 322 LLRKELKDREEAAMLESLAAASVVLATNTGASADGPLKLLPDSHFDMVVIDECAQALEAS 381
Query: 680 CMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQYR 737
C +P +L A++ IL GDH QL P ++ KAA AGLS SL ERL G R L VQYR
Sbjct: 382 CWIP-LLKARKCILAGDHKQLPPTIVSHKAALAGLSLSLMERLAERHGAGALRMLTVQYR 440
Query: 738 MHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQG---QEE 790
MH ++++ S Y G L L D P + P+L T G E
Sbjct: 441 MHQAIARWASEALYHGQLTAHPSVAGHLLR--DLPGVAATEETGVPLLLVDTAGCGLLEL 498
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAK 850
S N E V + G++ I VITPY Q L Q + ++ LP
Sbjct: 499 EEDDEQSKGNPGEVRLVGLHVQALVDAGVRAADIAVITPYNLQVDLLRQSLAHR--LP-- 554
Query: 851 IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNP 910
E+E+ SVD FQGREK+ +I+S VRSN +GFL + RR+NVA+TRA+ + V+ +
Sbjct: 555 ---ELEIRSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDS 611
Query: 911 KVLSKQPLWNNLLNFYKE 928
+ +S L+++ E
Sbjct: 612 RTVSNHAFLKTLVDYLTE 629
Score = 178 (67.7 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 51/124 (41%), Positives = 72/124 (58%)
Query: 471 VSAYIYHRLLGHNVDEVLFRCHLPKHFSA-PNL----PDLNRSQVYAVKHAI-QRPLSLI 524
+S +H ++ EVLF P S P L P L+ SQ AV A+ Q+ L++I
Sbjct: 150 ISLKKHHAGPASSLIEVLFGASDPSPPSEMPPLTFCNPALDASQQEAVLFALSQKELAII 209
Query: 525 QGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSRE 584
GPPGTGKT T I+ Q VK+ GS VL CAPSN+AVD L E++ + +++R+ +R
Sbjct: 210 HGPPGTGKTTTVVEIILQAVKR-GSKVLCCAPSNVAVDNLVERLAQWKQRILRLGHPAR- 267
Query: 585 AIDS 588
+DS
Sbjct: 268 LLDS 271
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 251 (93.4 bits), Expect = 2.5e-34, Sum P(3) = 2.5e-34
Identities = 71/207 (34%), Positives = 110/207 (53%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQG 787
+L YR H L PS FY L+ VCAD + ++ + W +P K P++F+ +G
Sbjct: 969 KLVKNYRSHSALLALPSRLFYHRELE--VCADPKVVTSL-LGWEKLPRKGFPLIFHGVRG 1025
Query: 788 QEEIAGSGTSYVNRTEASNVEK---ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
E G S+ + EA V + + R + + + IGVITPY Q V+ ++
Sbjct: 1026 NEAREGRSPSWFSPAEAVQVMRYCCLLARSVSSQVSSKDIGVITPYRKQ----VEKIKIL 1081
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN------DHQGIGFLNDPRRLNVALT 898
L +I+V SV+ FQG+E +I++S VRSN D +GFL++ +R NVA+T
Sbjct: 1082 --LRNVDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAIT 1139
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNF 925
R K +I++GNP VL + P + LL +
Sbjct: 1140 RPKALLIILGNPHVLVRDPCFGALLEY 1166
Score = 137 (53.3 bits), Expect = 2.5e-34, Sum P(3) = 2.5e-34
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 646 VICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK---QLILVGDHCQ 699
+I TC AG + ++ F + +DE+ QA+EPEC++P+ L + Q++L GD Q
Sbjct: 861 IIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPMQ 920
Query: 700 LGPVVMCKKAARAGLSQSLFERLV 723
LGPV+ + A GL+ S+ ERL+
Sbjct: 921 LGPVIKSRLAMAYGLNVSMLERLM 944
Score = 128 (50.1 bits), Expect = 2.5e-34, Sum P(3) = 2.5e-34
Identities = 37/86 (43%), Positives = 47/86 (54%)
Query: 503 PDLNRSQVYAVKHAIQ---RPLSLIQ-GPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPS 557
P LN +Q AV+ + RPL I GPPGTGKTVT V Q+ S +LVCAPS
Sbjct: 745 PVLNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPS 804
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR 583
N A D + ++H + KV + A R
Sbjct: 805 NSAADLVCLRLHES--KVPKPAAMVR 828
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 252 (93.8 bits), Expect = 3.5e-34, Sum P(3) = 3.5e-34
Identities = 74/207 (35%), Positives = 107/207 (51%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQG 787
+L YR H L PS FY L+ VCAD ++ + W +P K P++F+ +G
Sbjct: 967 KLVKNYRSHEALLMLPSRLFYHRELE--VCADPTVVTSL-LGWEKLPKKGFPLIFHGVRG 1023
Query: 788 QEEIAGSGTSYVNRTEASNVEK---ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
E G S+ N EA V + + I + IGVITPY Q V+ ++
Sbjct: 1024 SEAREGKSPSWFNPAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQ----VEKIRIL 1079
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN------DHQGIGFLNDPRRLNVALT 898
L +I+V SV+ FQG+E +II+S VRSN D +GFL++ +R NVA+T
Sbjct: 1080 --LRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAIT 1137
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNF 925
R K +IV+GNP VL + P + LL +
Sbjct: 1138 RPKALLIVLGNPHVLVRDPCFGALLEY 1164
Score = 133 (51.9 bits), Expect = 3.5e-34, Sum P(3) = 3.5e-34
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 646 VICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK---QLILVGDHCQ 699
+I TC +G + ++ F + +DE+ QA+EPEC++P+ L + Q++L GD Q
Sbjct: 859 IIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPMQ 918
Query: 700 LGPVVMCKKAARAGLSQSLFERLV 723
LGPV+ + A GL+ S ERL+
Sbjct: 919 LGPVIKSRLAMAYGLNVSFLERLM 942
Score = 130 (50.8 bits), Expect = 3.5e-34, Sum P(3) = 3.5e-34
Identities = 39/90 (43%), Positives = 49/90 (54%)
Query: 503 PDLNRSQVYAVKHAIQ---RPLSLIQ-GPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPS 557
P LN +Q AVK + RPL I GPPGTGKTVT V Q+ S +LVCAPS
Sbjct: 743 PVLNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCAPS 802
Query: 558 NIAVDQLTEKIHRTGL----KVVRVCAKSR 583
N A D + ++H + + +VRV A R
Sbjct: 803 NSAADLVCLRLHESKVLQPATMVRVNATCR 832
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 375 (137.1 bits), Expect = 3.9e-34, Sum P(4) = 3.9e-34
Identities = 109/349 (31%), Positives = 179/349 (51%)
Query: 634 KNAEKSLLDNADVICCTCVGAGDPRLLK-------IKFHSILIDESMQATEPECMVPVIL 686
+ A+ +++ + VICCT +G L + F +++DE+ Q+ E E + P+I
Sbjct: 2115 QRAQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIH 2174
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV----------VLGIRP-FRLEVQ 735
+L+LVGD QL P V+ KA G QS+ R ++G P +L +Q
Sbjct: 2175 RCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVEQNMIGRLPVLQLTIQ 2234
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQGQEEIAGS 794
YRMHP++ FPSN+ Y +L+ + + S WP +P L F V G E+
Sbjct: 2235 YRMHPDICLFPSNYVYNKNLKTNRLTETIRCSS---EWPF--QPYLVFDVGDGSEQ--RD 2287
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKP---EQIGVITPYEGQRAFLVQHMQ--YQGSLPA 849
SY+N E V +I + I+ K IG+IT Y+ Q+ + + ++ + PA
Sbjct: 2288 NDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPA 2346
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIG 908
EV +VDAFQGR+KD II++CVR++ QG IGFL +RLNV +TRAKY + ++G
Sbjct: 2347 ------EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILG 2400
Query: 909 NPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
+ + L + W L+ +++ +++ N + + K K +++
Sbjct: 2401 HLRTLMENQHWYELIQDAQKRGAIIKTCDPNYRHDAMKILKLKPVLQRS 2449
Score = 104 (41.7 bits), Expect = 3.9e-34, Sum P(4) = 3.9e-34
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 513 VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQT---G------------SPVLVCAP 556
VKH+ + LI GPPGTGK+ T ++Y+L+ ++ G + VLVCAP
Sbjct: 1926 VKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAP 1985
Query: 557 SNIAVDQLTEKI 568
SN AVD+L +KI
Sbjct: 1986 SNAAVDELMKKI 1997
Score = 76 (31.8 bits), Expect = 3.0e-31, Sum P(4) = 3.0e-31
Identities = 31/94 (32%), Positives = 44/94 (46%)
Query: 502 LPDLNRSQ------VYA-VKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
L D N Q YA VKH+ + LI GPPGTGK+ T ++Y+L+ ++
Sbjct: 1908 LKDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTESQRK--- 1964
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRVCAKSREAID 587
S+ + KI + V VCA S A+D
Sbjct: 1965 -GHSD---ENFNAKIKQNR---VLVCAPSNAAVD 1991
Score = 50 (22.7 bits), Expect = 3.9e-34, Sum P(4) = 3.9e-34
Identities = 25/92 (27%), Positives = 39/92 (42%)
Query: 271 VLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTD 330
V +R++D +Y N+F PL+ L A E V W NK++ L K
Sbjct: 1715 VPVRFQDCAEYFNVFLPLIILNAF-----------ETVAQEWLNSPNKENFYQLHLRKFP 1763
Query: 331 GDGYQYQNIFGPLVKLEADYDKRLKESQTQEN 362
D Y+ + L+ LE + K+ +EN
Sbjct: 1764 AD---YKKYWEFLIYLEES--ELAKQLHPKEN 1790
Score = 40 (19.1 bits), Expect = 3.9e-34, Sum P(4) = 3.9e-34
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 223 KVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPG--VDED 267
KV E Q+ V + Q+A+ ++ + + E+ D+ P V+ D
Sbjct: 1158 KVTAEDPQRPSSSVRTEQLAEHRDLPERDLESADVDMAAPSSSVERD 1204
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 321 (118.1 bits), Expect = 5.1e-34, Sum P(2) = 5.1e-34
Identities = 103/335 (30%), Positives = 172/335 (51%)
Query: 625 DEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPR--LLKIKFHSILIDESMQATEPECMV 682
D +R K A LL A+VI T G R L +I I+E+ E +
Sbjct: 665 DRERIGFSNKRAA-ILLRGANVIGMTTTGLNKYRDILERINPKICFIEEAADVLEGPIIP 723
Query: 683 PVILGAKQLILVGDHCQLGPVVMCKK-AARA---GLSQSLFERLVVLGIRPFRLEVQYRM 738
V +QL+L+GDH QL P C A R LS S+FERLV + RL +Q RM
Sbjct: 724 AVFPSLEQLVLIGDHKQLRPG--CSTYALRQDPFNLSISMFERLVENDMEYTRLTMQRRM 781
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDKPML--FYVTQGQEEIAGSG 795
HP++ + S+ + + S + +++K WP +P + F++T + E
Sbjct: 782 HPQIRRLVSSVYEDLS--------DYEITKY---WPSIPGMGEIRRFFLTHSRIEDNDGF 830
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
S +N EA + + I G++P++I +T Y Q+ L++ + + K + I
Sbjct: 831 ASKINLFEAQMLVQFAVYLINNGVEPQKITCLTFYAAQKD-LIERLLSESLNREKHF--I 887
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
+VA+VD +QG E D++++S VR+ND +GFL+ P R+ V+L+RA+ G+ + GN +++++
Sbjct: 888 KVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRARRGLFIFGNAQLVAE 947
Query: 916 Q-PLWNNLLNFYKEQKVLVEGPLNNLKESLILFSK 949
PLW + +N + ++G L + L LF+K
Sbjct: 948 SNPLWWDAINTLMNDET-IQG----LGDHLPLFTK 977
Score = 138 (53.6 bits), Expect = 5.1e-34, Sum P(2) = 5.1e-34
Identities = 79/357 (22%), Positives = 157/357 (43%)
Query: 248 WKDNAEA-TFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQE 306
W++ T ++L V+ + + Y+ Y +I L L D L+ES +
Sbjct: 130 WRELPSIPTLEELTSKSVELPSNNIYGGYKSFEDYLSIHYRL--LREDAVSPLRESVLRY 187
Query: 307 NVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVR 366
V + G S+A + + DG Y I ++ + + R K+ ++
Sbjct: 188 KVNPNYITG---SSLAVYDHVRIDG----Y-TISSSVIAAKLSFSVRAKKK-------IK 232
Query: 367 WDVGLNKKSIAYFSLAKTDGDMRLMQGDELK-LRYSYDASKTWSGLG-HVIKIPDNFGD- 423
W +++ I+ G + L+ D+ + R ++ SGL H +I F D
Sbjct: 233 W--ATSRRLIS--------GSLVLLSNDDFQTFRIGTVCARPLSGLNKHPHEIDVKFEDI 282
Query: 424 EVGLELKSSAGAPTEATTGFSVDFIWKSTSFDRMQLA---LRKFAV---DDQSVSAYIYH 477
+ L+ + EAT+G+ + S R+ + ++ + V +Q + +I +
Sbjct: 283 SISLDPREEY-VMIEATSGYWEAYKHVLRSLQRLSASTFPMKDYLVHCKSNQETAKHIQN 341
Query: 478 R-------LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGT 530
+L +N +++ + + F P L+ SQ+ A + + + LS+IQGPPGT
Sbjct: 342 NPRIRINSILKNNSQKIV---NALEPFG-PGEYILDSSQLKAYQSMLTKRLSIIQGPPGT 397
Query: 531 GKTVTSATIVYQLVKQTGS---PVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSRE 584
GK+ + + L++ T S P+LV +N AVDQ+ ++ G V+R+ +++++
Sbjct: 398 GKSFVTLKAIETLLENTHSHVLPILVACQTNHAVDQILIRLLHQGASVMRLGSRTKD 454
Score = 51 (23.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 784 VTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQY 843
+T Q E + T +++ A N EK I + ++ +ITP E F + +Q
Sbjct: 514 ITTSQLESLRNNTEWISSV-AENGEKTEEELISIWLGDAKVELITPSEITDGF-EEELQI 571
Query: 844 QGSLPAKIYQEIEVASVDAFQGREKDL 870
P K+ +EI+ + D+ E++L
Sbjct: 572 D---PEKL-EEIQKEAEDSGALMEEEL 594
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 403 (146.9 bits), Expect = 6.6e-34, P = 6.6e-34
Identities = 109/300 (36%), Positives = 160/300 (53%)
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVI 685
K + +K K +L NA V+ T +GA DP + +++ F ++IDE+ Q+ EP C +P++
Sbjct: 624 KTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRLETFDLVVIDEAGQSIEPSCWIPIL 683
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELS 743
G K+ IL GD CQL PVV+ +KA GL SL ER L G+ +L QYRM+ ++
Sbjct: 684 QG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIA 742
Query: 744 KFPSNFFYEGSLQNGVCADERKLSKIDFP-----WPVPDKPMLFYVTQ--------GQEE 790
+ S Y G L++ L ID P W + P++ T+ G EE
Sbjct: 743 GWASKEMYGGWLKSAPSVASHLL--IDSPFVKATW-ITQCPLVLLDTRMPYGSLSVGCEE 799
Query: 791 I---AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
AG+G+ Y N EA V I G+ P I V +PY Q L + +
Sbjct: 800 RLDPAGTGSLY-NEGEADIVVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLD---DF 855
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
P + +EVA++D+FQGRE D +I+S VRSN+ +GFL D RR+NVA+TRA+ + V+
Sbjct: 856 P--VADGVEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVV 913
Score = 342 (125.4 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 121/407 (29%), Positives = 195/407 (47%)
Query: 401 SYDASKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATT-GFSV--DFIW---KSTSF 454
S A T G V + ++ G +G+ L+S G PT + G SV D I + ++
Sbjct: 369 SRGAGATACTQGFVHNLGED-GCSIGVALESRHGDPTFSKLFGKSVRIDRIHGLADALTY 427
Query: 455 DR---MQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVY 511
+R + L+K + ++ S + L G D + +S L D S+++
Sbjct: 428 ERNCEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDYVDWSEAELSDEPVSKLF 487
Query: 512 --AVKHAI------QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
+ + AI +RP+ ++QGPPGTGKT ++ V+Q G VLV AP+N AVD
Sbjct: 488 DSSQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQ-GERVLVTAPTNAAVDN 546
Query: 564 LTEKIHRTGLKVVRV----------CAKSR-EAIDSPVSFLALHNQIRNMEMNSXXXXXX 612
+ EK+ GL +VRV +KS E ++S ++ + + ++
Sbjct: 547 MVEKLLHLGLNIVRVGNPARISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLRQCL 606
Query: 613 XXXXXXXXXSSADEKRYRMLKKNAE---KSLLDNADVICCTCVGAGDPRLLKIK-FHSIL 668
++ + LKK + K +L NA V+ T +GA DP + +++ F ++
Sbjct: 607 RDDVLAAGIRQLLKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRLETFDLVV 666
Query: 669 IDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--G 726
IDE+ Q+ EP C +P++ G K+ IL GD CQL PVV+ +KA GL SL ER L G
Sbjct: 667 IDEAGQSIEPSCWIPILQG-KRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDG 725
Query: 727 IRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
+ +L QYRM+ ++ + S Y G L++ L ID P+
Sbjct: 726 VLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSVASHLL--IDSPF 770
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 253 (94.1 bits), Expect = 1.0e-33, Sum P(4) = 1.0e-33
Identities = 73/207 (35%), Positives = 108/207 (52%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQG 787
+L YR H L PS FY L+ VCAD ++ + W +P K P++F+ +G
Sbjct: 970 KLVKNYRSHSALLALPSRLFYHRELE--VCADPTVVASL-LGWEKLPRKGFPLIFHGVRG 1026
Query: 788 QEEIAGSGTSYVNRTEASNVEK---ITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
E G S+ N EA V + + R + + IGVITPY Q V+ ++
Sbjct: 1027 NEAREGRSPSWFNPAEAVQVMRYCCMLARSVSSQVSARDIGVITPYRKQ----VEKIKIL 1082
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN------DHQGIGFLNDPRRLNVALT 898
L +I+V SV+ FQG+E ++I+S VRSN D +GFL++ +R NVA+T
Sbjct: 1083 --LRNVDLMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAIT 1140
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNF 925
R K +IV+GNP VL + P + LL +
Sbjct: 1141 RPKALLIVLGNPHVLVRDPCFGALLEY 1167
Score = 136 (52.9 bits), Expect = 1.0e-33, Sum P(4) = 1.0e-33
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 646 VICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK---QLILVGDHCQ 699
V+ TC AG + ++ F + +DE+ QA+EPEC++P+ L + Q++L GD Q
Sbjct: 862 VLITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASEPECLIPLGLVSDVSGQIVLAGDPMQ 921
Query: 700 LGPVVMCKKAARAGLSQSLFERLV 723
LGPV+ + A GL+ S+ ERL+
Sbjct: 922 LGPVIKSRLAMAYGLNVSMLERLM 945
Score = 125 (49.1 bits), Expect = 1.0e-33, Sum P(4) = 1.0e-33
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 503 PDLNRSQVYAVKHAIQ---RPLSLIQ-GPPGTGKTVTSATIVYQLVKQT-GSPVLVCAPS 557
P LN +Q AV+ + RP+ + GPPGTGKTVT + Q+ S +LVCAPS
Sbjct: 746 PMLNENQKLAVRRILSGDCRPIPYVLFGPPGTGKTVTIIEAILQVFHALPDSRILVCAPS 805
Query: 558 NIAVDQLTEKIHRT-GLK---VVRVCAKSR 583
N A D + ++H + L+ +VRV A R
Sbjct: 806 NSAADLVCLRLHESRALRPGTMVRVNATCR 835
Score = 42 (19.8 bits), Expect = 1.0e-33, Sum P(4) = 1.0e-33
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 37 DFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLN 71
D +P + T+AS+LD+V+ ++ N LN
Sbjct: 716 DTPVPRAATTEASRLDAVSG-SPKAREKFFNPMLN 749
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 401 (146.2 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 142/439 (32%), Positives = 209/439 (47%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC----APSNIAVDQLT---EKIHR 570
Q+ L++I GPPGTGKT T I+ Q VKQ + A N+ V++L ++I R
Sbjct: 203 QKELAIIHGPPGTGKTTTVVEIILQAVKQGSKVLCCAPSNVAVDNL-VERLARWKQRIVR 261
Query: 571 TG--LKVVR-VCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADE- 626
G +++ + S +A+ + + IR +++ DE
Sbjct: 262 LGHPARLLESIQQHSLDAVLARSDGARVVADIRR-DIDQVLGKTKKTQDKREKSHFRDEI 320
Query: 627 KRYRM-LKKNAEKSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEP 678
K R LK+ E ++L++ A V+ T GA LK+ F ++IDE QA E
Sbjct: 321 KLLRKELKEREEAAMLESLTAARVVLATNAGASSDGPLKLLPDGHFDVVVIDECAQALEA 380
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFR-LEVQY 736
C VP +L A++ IL GDH QL P ++ KAA AGL+ SL ERLV G R L VQY
Sbjct: 381 SCWVP-LLKARKCILAGDHKQLPPTIISHKAALAGLALSLMERLVEERGAGVLRMLTVQY 439
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQE--E 790
RMH ++++ S Y G L L D P + P+L T G E
Sbjct: 440 RMHQAIAQWASEALYHGRLTAHASVAGHLLR--DLPGVAATEETGIPLLLVDTAGCGLFE 497
Query: 791 IAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
+ S N E V + G+ + VITPY Q L Q + A
Sbjct: 498 LEEEDEQSKGNPGEVRLVRLHVQALVDAGVPAGDVAVITPYNLQVDLLRQSL-------A 550
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+ + E+E+ SVD FQGREK+ +I+S VRSN +GFL + RR+NVA+TRA+ + V+ +
Sbjct: 551 QRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCD 610
Query: 910 PKVLSKQPLWNNLLNFYKE 928
+ +S L+ ++ E
Sbjct: 611 SRTVSNHAFLKTLVAYFAE 629
Score = 185 (70.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 50/109 (45%), Positives = 63/109 (57%)
Query: 476 YHRLLGHNVDEVLFRCHLPKHFS-APNLP----DLNRSQVYAVKHAI-QRPLSLIQGPPG 529
YH + EVLF P S P L L+ SQ AV A+ Q+ L++I GPPG
Sbjct: 155 YHSGPASALIEVLFGASAPSPASDIPPLTFYNTALDASQKEAVLFALSQKELAIIHGPPG 214
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
TGKT T I+ Q VKQ GS VL CAPSN+AVD L E++ R ++VR+
Sbjct: 215 TGKTTTVVEIILQAVKQ-GSKVLCCAPSNVAVDNLVERLARWKQRIVRL 262
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 348 (127.6 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 96/313 (30%), Positives = 157/313 (50%)
Query: 645 DVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILG--AKQLILVGDHCQLGP 702
DVI CTC A L K+ ILIDE +TEPE ++P++ A++++L+GDH QL P
Sbjct: 2251 DVILCTCSSASAGSLEKLNVKQILIDECAMSTEPETLIPLVSHKHAEKVVLLGDHKQLKP 2310
Query: 703 VVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD 762
VV G+ SLFER + + L+ QYRMH + +FPS FYE L+ C
Sbjct: 2311 VVNNDFCKSLGMETSLFERYQK---QAWMLDTQYRMHKNICEFPSQEFYEHRLKT--CPQ 2365
Query: 763 ERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKI-----TTRFIRC 817
++ + + P++F +G+E+ T N +N E++ T + +
Sbjct: 2366 LLRIPSVLYHKNNRCCPIIFGHVEGKEQSLVISTEEGNENSKANPEEVEQAVRTAKQLTL 2425
Query: 818 G--MKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSC 875
++P+ I +++PY Q + + + + +G + + V ++ QG E +I+S
Sbjct: 2426 DGTIRPQSIAILSPYNAQVSEINKRLLKEG------IRGVTVCTIMKSQGSEWRYVILST 2479
Query: 876 VRS-NDHQ------------GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNL 922
VRS + H+ +GF+ DP ++NVA+TRA+ G+ +IGN +L PLW L
Sbjct: 2480 VRSCSRHEIDKKPTKSWQKKHLGFVTDPNQVNVAITRAQEGLCIIGNRYLLECNPLWRRL 2539
Query: 923 LNFYKEQKVLVEG 935
L Y + G
Sbjct: 2540 LQHYIDHNCYTSG 2552
Score = 197 (74.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 108/420 (25%), Positives = 180/420 (42%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD-QLTEKIHRTGLKVV 576
Q P LI GP GTGKT T A ++++Q + VL+C +N A D + E H+
Sbjct: 533 QVPPLLIYGPFGTGKTFTLAMATLEVIRQPNTRVLICTHTNSAADIYIREYFHKY----- 587
Query: 577 RVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRYRMLKKNA 636
V A+ P+ +A I + + + D++ +R +
Sbjct: 588 -VTNGHPWAV--PLRIIATDRPINLTDPTTQMYCCL----------TKDQRSFR----HP 630
Query: 637 EKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGA--KQLILV 694
+ +D +I T + + ++ F I+IDE+ Q E E ++P+ +++L
Sbjct: 631 TREEIDKHPIIITTSMLSKHLKVAPGYFTHIMIDEAAQMLECEALIPLSYATFETRIVLA 690
Query: 695 GDHCQLGPVVMCK---KAARAGLSQSLFE------RLVVLGIRPFRLEVQYRMHPELSKF 745
GDH Q+ P + C ++A L LF+ V + R E YR + +F
Sbjct: 691 GDHMQITPKLFCVADGQSAYHTLLNRLFQFYQKEKHEVAMKSRIIFNE-NYRSTAGIIEF 749
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPD-KPMLFYVTQGQEEIAGSGTSYVNRTEA 804
S FY G N + A + P P P+ P++F G E S S+ N +E
Sbjct: 750 VSKHFYIGK-GNAIHASG------NIP-PHPEIYPLMFCHVPGVAERDMSMISWHNASEI 801
Query: 805 SNV-EKITTRFIRCGMKPEQIGVITPYEGQRAFLVQH-MQYQG---SLPAKIYQEIEVAS 859
+ V EK+ + R P + G + +R +V H +Q L K E+ V +
Sbjct: 802 TQVVEKVEEIYQRW---PHEWGA---QDQKRICVVSHGVQVSAIRQELRKKQLPEVVVEN 855
Query: 860 VDAFQGREKDLIIMSCVRSNDHQGIG------FLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+ GRE +II+S V +++ + F N+ R LN +TRA+ +IV+G+ L
Sbjct: 856 YENLPGREFRVIIISTVHTSESLRVSASHNHEFFNEARVLNTIMTRAQSQVIVVGDAVAL 915
Score = 122 (48.0 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 46/155 (29%), Positives = 68/155 (43%)
Query: 437 TEATTGFSVDFIWKSTSFDRMQLALRKFA-VDDQSVSAYIYHRLLGHNVDEVLFRCHLPK 495
++A+ F+V+ I K R + A+ K D + S + H + + K
Sbjct: 1998 SQASARFTVELIPKMLPDVRKENAIWKLQNASDLAKSIALGHEPPSKALTVTKSKILQQK 2057
Query: 496 HFSAPNLP-DLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC 554
F P LN SQ AV +A+ +P +LIQGPPGTGKTV IVY K
Sbjct: 2058 SFDLPGSQRKLNPSQNKAVLNALTKPFTLIQGPPGTGKTVVGTHIVYWFHKLNEEAT--- 2114
Query: 555 APSNIAVDQLT--EKIHRTGLKVVRVCAKSREAID 587
A +QL ++ G K + C S +++D
Sbjct: 2115 -----AKEQLPCPDEDEPQGKKCILYCGPSNKSVD 2144
Score = 61 (26.5 bits), Expect = 4.4e-27, Sum P(3) = 4.4e-27
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 551 VLVCAPSNIAVDQLTEKIHRT-GLKVVRVCAKSREAIDSP 589
+L C PSN +VD + E + + LK +RV ++ E ++ P
Sbjct: 2133 ILYCGPSNKSVDVVAEILMKMKSLKPLRVYGEAIETLEYP 2172
Score = 45 (20.9 bits), Expect = 2.1e-33, Sum P(3) = 2.1e-33
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 157 ETVLECYTCGVRN-IFVLGFIPAKADSVVVLLCRTPCAAQNSLKDMNW 203
E V + + G N I G IP + ++ C P A+ + ++W
Sbjct: 748 EFVSKHFYIGKGNAIHASGNIPPHPEIYPLMFCHVPGVAERDMSMISW 795
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 355 (130.0 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 97/309 (31%), Positives = 163/309 (52%)
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+ L ++ ++ TC+G P + F ++DE+ Q ++P C+ P+ +++ +LVGDH
Sbjct: 702 EELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFF-SQRFVLVGDH 760
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQN 757
QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++ + Y+G L+
Sbjct: 761 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLEC 820
Query: 758 GVCADERKLSKIDFPWPVPDKPML-FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
G +D+ + ++ P K L FY + N N +K
Sbjct: 821 G--SDKVANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDK------- 871
Query: 817 CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCV 876
G KP IG+I PY Q+ ++ + + S+ + +EV +VD +QGR+K +I++S V
Sbjct: 872 AGCKPSDIGIIAPYR-QQLKIINDLLFHSSI-----RMVEVNTVDKYQGRDKSIILVSFV 925
Query: 877 RSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEG 935
RSN IG L D RRLNVA+TRAK+ +I++G L++ P LL+ +K +++
Sbjct: 926 RSNKDGPIGELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLNSEKKIMDL 985
Query: 936 PLNNLKESL 944
P ESL
Sbjct: 986 PSEE-HESL 993
Score = 96 (38.9 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G VL+ + ++ A
Sbjct: 595 LKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILYTCGFSVLLTSYTHSA 653
Query: 561 VDQLTEKIHRTGLKVVRV 578
VD + K+ + + +R+
Sbjct: 654 VDNILLKLAKFKIGFLRL 671
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 397 (144.8 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 139/439 (31%), Positives = 209/439 (47%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC----APSNIAVDQLT---EKIHR 570
Q+ L++I GPPGTGKT T I+ Q V+Q + A N+ V++L +KI R
Sbjct: 205 QKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNIAVDNL-VERLARCKQKILR 263
Query: 571 TG--LKVVR-VCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEK 627
G +++ + S +A+ + + IR +++ S +E
Sbjct: 264 LGHPARLLESIQQHSLDAVLARSDNAQIVADIRK-DIDQAFVNNRQTQDRREKSSVWNEV 322
Query: 628 RY--RMLKKNAEKSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEP 678
+ + LK+ E ++L++ A V+ T GA LK+ F ++IDE QA E
Sbjct: 323 KLLRKELKEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEA 382
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQY 736
C +P +L A++ IL GDH QL P + KAA AGLS SL ERL G R R L VQY
Sbjct: 383 SCWIP-LLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQY 441
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQE--E 790
RMH + ++ S Y G L L D P + P+L T G E
Sbjct: 442 RMHQAIMRWASEALYHGQLTAHPSVAGHLLR--DLPGVAATEETGIPLLLVDTAGCGLFE 499
Query: 791 IAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
+ S N E V + G++ I VITPY Q L Q + ++
Sbjct: 500 LEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHR----- 554
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+ E+E+ SVD FQGREK+ +++S VRSN +GFL + RR+NVA+TRA+ + V+ +
Sbjct: 555 --HPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCD 612
Query: 910 PKVLSKQPLWNNLLNFYKE 928
+ +S L++ + E
Sbjct: 613 SRTVSNHAFLKTLVDHFTE 631
Score = 183 (69.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 48/109 (44%), Positives = 62/109 (56%)
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLP-----DLNRSQVYAVKHAI-QRPLSLIQGPPG 529
YH ++ EVLF P S P L+ SQ AV A+ Q+ L++I GPPG
Sbjct: 157 YHSGPASSLIEVLFGGSAPSPASNTEPPLFCNTSLDASQKEAVSFALSQKELAIIHGPPG 216
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
TGKT T I+ Q V+Q G VL CAPSNIAVD L E++ R K++R+
Sbjct: 217 TGKTTTVVEIILQAVRQ-GLKVLCCAPSNIAVDNLVERLARCKQKILRL 264
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 397 (144.8 bits), Expect = 3.3e-33, P = 3.3e-33
Identities = 139/439 (31%), Positives = 209/439 (47%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC----APSNIAVDQLT---EKIHR 570
Q+ L++I GPPGTGKT T I+ Q V+Q + A N+ V++L +KI R
Sbjct: 205 QKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNIAVDNL-VERLARCKQKILR 263
Query: 571 TG--LKVVR-VCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEK 627
G +++ + S +A+ + + IR +++ S +E
Sbjct: 264 LGHPARLLESIQQHSLDAVLARSDNAQIVADIRK-DIDQAFVNNRQTQDRREKSSVWNEV 322
Query: 628 RY--RMLKKNAEKSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEP 678
+ + LK+ E ++L++ A V+ T GA LK+ F ++IDE QA E
Sbjct: 323 KLLRKELKEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPDTHFDVVVIDECAQALEA 382
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQY 736
C +P +L A++ IL GDH QL P + KAA AGLS SL ERL G R R L VQY
Sbjct: 383 SCWIP-LLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEHGARVVRTLTVQY 441
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQE--E 790
RMH + ++ S Y G L L D P + P+L T G E
Sbjct: 442 RMHQAIMRWASEALYHGQLTAHPSVAGHLLR--DLPGVAATEETGIPLLLVDTAGCGLFE 499
Query: 791 IAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
+ S N E V + G++ I VITPY Q L Q + ++
Sbjct: 500 LEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVITPYNLQVDLLRQSLAHR----- 554
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+ E+E+ SVD FQGREK+ +++S VRSN +GFL + RR+NVA+TRA+ + V+ +
Sbjct: 555 --HPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCD 612
Query: 910 PKVLSKQPLWNNLLNFYKE 928
+ +S L++ + E
Sbjct: 613 SRTVSNHAFLKTLVDHFTE 631
Score = 183 (69.5 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 48/109 (44%), Positives = 62/109 (56%)
Query: 476 YHRLLGHNVDEVLFRCHLPKHFSAPNLP-----DLNRSQVYAVKHAI-QRPLSLIQGPPG 529
YH ++ EVLF P S P L+ SQ AV A+ Q+ L++I GPPG
Sbjct: 157 YHSGPASSLIEVLFGGSAPSPASNTEPPLFCNTSLDASQKEAVSFALSQKELAIIHGPPG 216
Query: 530 TGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
TGKT T I+ Q V+Q G VL CAPSNIAVD L E++ R K++R+
Sbjct: 217 TGKTTTVVEIILQAVRQ-GLKVLCCAPSNIAVDNLVERLARCKQKILRL 264
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 392 (143.0 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 140/439 (31%), Positives = 215/439 (48%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVC----APSNIAVDQLT---EKIHR 570
Q+ L++I GPPGTGKT T I+ Q VKQ + A N+ V++L ++I R
Sbjct: 206 QKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNL-VERLALCKQRILR 264
Query: 571 TG--LKVVR-VCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADE- 626
G +++ + S +A+ + + IR +++ + +E
Sbjct: 265 LGHPARLLESIQQHSLDAVLARSDSAQIVADIRK-DIDQVFVKNKKTQDKREKSNFRNEI 323
Query: 627 KRYRM-LKKNAEKSLLDN---ADVICCTCVGA---GDPRLL-KIKFHSILIDESMQATEP 678
K R LK+ E ++L++ A+V+ T GA G +LL + F ++IDE QA E
Sbjct: 324 KLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEA 383
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFR-LEVQY 736
C +P +L A++ IL GDH QL P + KAA AGLS SL ERL G R R L VQY
Sbjct: 384 SCWIP-LLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQY 442
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQE--E 790
RMH + ++ S+ Y G L + R L + D P + P+L T G E
Sbjct: 443 RMHQAIMRWASDTMYLGQL-TAHSSVARHLLR-DLPGVAATEETGVPLLLVDTAGCGLFE 500
Query: 791 IAGSGT-SYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
+ S N E V + G+ I V++PY Q L Q + ++
Sbjct: 501 LEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHR----- 555
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGN 909
+ E+E+ SVD FQGREK+ +I+S VRSN +GFL + RR+NVA+TRA+ + VI +
Sbjct: 556 --HPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICD 613
Query: 910 PKVLSKQPLWNNLLNFYKE 928
+ ++ L+ ++ +
Sbjct: 614 SRTVNNHAFLKTLVEYFTQ 632
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 296 (109.3 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 81/219 (36%), Positives = 130/219 (59%)
Query: 714 LSQSLFERLV--VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADE-RKLSKI 769
L+ +LF+RL+ G + +L +VQYRM+ + +FPS Y+ L+ C D R++S +
Sbjct: 467 LATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLK---CDDSVREISLV 523
Query: 770 DFPW-PVPDKPM---LFYVTQG---QEEIAGS--GTSYVNRTEASNVEKITTRFIRCGMK 820
D P + D M ++Y TQG E+I+ S G S N E V+ + + G++
Sbjct: 524 DLPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQ 583
Query: 821 PEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE----IEVASVDAFQGREKDLIIMSCV 876
P+ IGVI PY Q L + M G + + + IE+++VD FQGREK++II++ V
Sbjct: 584 PQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLV 643
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
RSND + IGFL++ RRLNVA+TR K + V+G+ +++++
Sbjct: 644 RSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQ 682
Score = 169 (64.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 54/172 (31%), Positives = 87/172 (50%)
Query: 626 EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK---------IKFHSILIDESMQAT 676
+K R ++ LL A V+ T G+G L I F +I+IDE Q+
Sbjct: 358 KKELRQRERKIVNELLVQAQVVVATLHGSGSYELKNSVGTNNNEGIVFDTIIIDEVSQSL 417
Query: 677 EPECMVPVILGA--KQLILVGDHCQLGPVVMCKKAARAGLSQS----------LFERLV- 723
EP+C +P++L K+L++ GD+ QL P + +K+ + S S LF+RL+
Sbjct: 418 EPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASILATTLFDRLMK 477
Query: 724 -VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADE-RKLSKIDFP 772
G + +L +VQYRM+ + +FPS Y+ L+ C D R++S +D P
Sbjct: 478 HCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLK---CDDSVREISLVDLP 526
Score = 145 (56.1 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A+ AI +++I GPPGTGKT T ++ QL + G VLVC PSNI+VD
Sbjct: 222 LNASQRQAIDFAINDSNITIIHGPPGTGKTYTLIELIQQLTSK-GEKVLVCGPSNISVDT 280
Query: 564 LTEKI--HRTGLKVVRV 578
+ E++ +K++R+
Sbjct: 281 ILERLGDKYEPMKLIRI 297
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 296 (109.3 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 81/219 (36%), Positives = 130/219 (59%)
Query: 714 LSQSLFERLV--VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADE-RKLSKI 769
L+ +LF+RL+ G + +L +VQYRM+ + +FPS Y+ L+ C D R++S +
Sbjct: 467 LATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLK---CDDSVREISLV 523
Query: 770 DFPW-PVPDKPM---LFYVTQG---QEEIAGS--GTSYVNRTEASNVEKITTRFIRCGMK 820
D P + D M ++Y TQG E+I+ S G S N E V+ + + G++
Sbjct: 524 DLPGVEINDDTMTKCIWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQ 583
Query: 821 PEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE----IEVASVDAFQGREKDLIIMSCV 876
P+ IGVI PY Q L + M G + + + IE+++VD FQGREK++II++ V
Sbjct: 584 PQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQGREKEVIILTLV 643
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
RSND + IGFL++ RRLNVA+TR K + V+G+ +++++
Sbjct: 644 RSNDSREIGFLSEQRRLNVAMTRPKRQLCVVGDLELMNQ 682
Score = 169 (64.5 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 54/172 (31%), Positives = 87/172 (50%)
Query: 626 EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLK---------IKFHSILIDESMQAT 676
+K R ++ LL A V+ T G+G L I F +I+IDE Q+
Sbjct: 358 KKELRQRERKIVNELLVQAQVVVATLHGSGSYELKNSVGTNNNEGIVFDTIIIDEVSQSL 417
Query: 677 EPECMVPVILGA--KQLILVGDHCQLGPVVMCKKAARAGLSQS----------LFERLV- 723
EP+C +P++L K+L++ GD+ QL P + +K+ + S S LF+RL+
Sbjct: 418 EPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASILATTLFDRLMK 477
Query: 724 -VLGIRPFRL-EVQYRMHPELSKFPSNFFYEGSLQNGVCADE-RKLSKIDFP 772
G + +L +VQYRM+ + +FPS Y+ L+ C D R++S +D P
Sbjct: 478 HCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLK---CDDSVREISLVDLP 526
Score = 145 (56.1 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 505 LNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN SQ A+ AI +++I GPPGTGKT T ++ QL + G VLVC PSNI+VD
Sbjct: 222 LNASQRQAIDFAINDSNITIIHGPPGTGKTYTLIELIQQLTSK-GEKVLVCGPSNISVDT 280
Query: 564 LTEKI--HRTGLKVVRV 578
+ E++ +K++R+
Sbjct: 281 ILERLGDKYEPMKLIRI 297
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 388 (141.6 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 135/453 (29%), Positives = 211/453 (46%)
Query: 506 NRSQVYAVKHAIQRPLS----LIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIA 560
N Q+ AV+ + P + ++ GPPGTGKT T + QL ++Q S +LV A SN A
Sbjct: 312 NAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSA 371
Query: 561 VDQLTEKIHRTGLKVVRVCAK-SREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXX 619
D + K+ +R+ +++ + P H IR +
Sbjct: 372 CDTIALKLCEYIESNIRLQEHFAQQKLPEPD-----HQLIRVYSRSIYEKGFASVPSLLL 426
Query: 620 XXSSADEKRYRMLKKNAEKSLLDNADVIC--CTCVGAGDPRLLKIKFHS-ILIDESMQAT 676
S+ + Y +K + ++ ++ CT L + F + I IDE+ +T
Sbjct: 427 KNSNCSKSIYDHIKASR---IVKYGIIVATLCTVARLVTDTLGRYNFFTHIFIDEAGAST 483
Query: 677 EPECMVPVILGAKQ-----LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI---- 727
EPE ++ I+G KQ +IL GDH QLG V+ +AA GLS+SL ERL+
Sbjct: 484 EPEALIG-IMGIKQTADCHVILSGDHKQLGAVIKSNRAASLGLSRSLMERLLQSDCYKSD 542
Query: 728 --------RPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPV---P 776
R RL YR HP++ + + +Y G L+ A + L+ W V P
Sbjct: 543 ENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAPAMDVNLAA---NWSVLTNP 599
Query: 777 DKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK-PEQIGVITPYEGQRA 835
P++F T G + TS N EA + R I + E +G++ PY Q
Sbjct: 600 QFPIIFQATHGVTNREQNSTSSYNNLEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGK 659
Query: 836 FLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNV 895
+ + +Q +G Y +EV SV+ +QGREK +II S V+S +GF+ +PRR+NV
Sbjct: 660 LVTKLLQSKG------YPNVEVGSVETYQGREKTIIIASLVKS--FTNMGFMCNPRRVNV 711
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
L+RAK +I++GNP L + ++N K+
Sbjct: 712 LLSRAKALLILVGNPVTLRHHSDFKFVINECKK 744
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 350 (128.3 bits), Expect = 7.0e-32, Sum P(4) = 7.0e-32
Identities = 110/324 (33%), Positives = 167/324 (51%)
Query: 644 ADVICCT---CVGAGDPRLLKIKFHSI-LIDESMQATEPECMVPVILGAKQLILVGDHCQ 699
A++IC T CV + + F I ++DE+ Q TEP ++P+ G ++LVGD Q
Sbjct: 1365 ANIICTTLSSCVKLAN----YVDFFDICIVDEATQCTEPWTLLPMRFGLTHMVLVGDMQQ 1420
Query: 700 LGPVVMCKKAARAGLSQSLFERLV--------------VLGIRPFRLEVQYRMHPELSKF 745
L VV+ KKA GLS S+F+R+ ++ + F+L QYRMHPE+ ++
Sbjct: 1421 LPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRW 1480
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEAS 805
P+ +FYE L N C R S + P+ V + L Y S N EA
Sbjct: 1481 PNQYFYEDQLINAECT-ARFASPL-IPYCVIN---LKYTCDSN---GAQNKSISNNEEAR 1532
Query: 806 NVEKITTRFIR-CGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQ 864
V K+ T + K G+I+PY+ Q L Q +P+ + I +VD++Q
Sbjct: 1533 FVAKLLTEMDKHMPSKRFSYGLISPYQNQCYALSQ------VIPS--HMNITPQTVDSYQ 1584
Query: 865 GREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLN 924
G EKD+II+S R+ +G GFL + +RLNVALTR + +++ GN + L +W NLL+
Sbjct: 1585 GLEKDVIIISNART---RGCGFLTNYQRLNVALTRPRRCLVICGNFEDLKSVEMWRNLLD 1641
Query: 925 FYKEQKV---LVEGPLNNLKESLI 945
+++KV L +N+L SLI
Sbjct: 1642 DARKRKVYFNLDRDDVNDLDRSLI 1665
Score = 109 (43.4 bits), Expect = 7.0e-32, Sum P(4) = 7.0e-32
Identities = 44/125 (35%), Positives = 59/125 (47%)
Query: 455 DRMQLALRKFAVDDQSVSAYIYHRLLG--HNVDEVLFRCHLPKH-FSAPNLPDLNRSQVY 511
D +++ L + Q S+ + R+L V+EV LPK F+ LN Q
Sbjct: 1123 DSLRVELGALSAVHQLRSSPLCRRILKPTQTVNEV----SLPKQPFTFKGCHKLNEHQEN 1178
Query: 512 AVKHAIQR------P-LSLIQGPPGTGKT-VTSA----TIVYQLVKQTGSPVLVCAPSNI 559
V H QR P L+LIQGPPGTGK+ V S T+ K +L+CA SN
Sbjct: 1179 IVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKILICAHSNT 1238
Query: 560 AVDQL 564
AVD +
Sbjct: 1239 AVDHI 1243
Score = 42 (19.8 bits), Expect = 7.0e-32, Sum P(4) = 7.0e-32
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 277 DGYQ-YQNIFGPLVKLE 292
D ++ Y+ IF PL+KLE
Sbjct: 1004 DSFKNYREIFVPLMKLE 1020
Score = 42 (19.8 bits), Expect = 7.0e-32, Sum P(4) = 7.0e-32
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 332 DGYQ-YQNIFGPLVKLE 347
D ++ Y+ IF PL+KLE
Sbjct: 1004 DSFKNYREIFVPLMKLE 1020
Score = 38 (18.4 bits), Expect = 7.0e-32, Sum P(4) = 7.0e-32
Identities = 14/70 (20%), Positives = 32/70 (45%)
Query: 195 QNSLKDMNWDQEQWKPLIADRSFLSWLV--KVPTEQEQQRGRQVTSAQIAKLEEVWKDNA 252
+N + + Q + ++A R+ + + K+ T + R R V++ +L K+
Sbjct: 470 ENMTETKSCSNRQREQIVASRNEPTNICPQKIETNKTSTRKRFVSTTSRDELSTTSKEIK 529
Query: 253 EATFQDLEKP 262
+A ++E P
Sbjct: 530 DAPKNNVEPP 539
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 281 (104.0 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 73/212 (34%), Positives = 116/212 (54%)
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQGQEEIA 792
YR HP + K P+ FYE LQ V A++ + W +P K P++F+ G++E
Sbjct: 748 YRSHPAILKIPNELFYENELQ--VFANQMEREAF-CQWEHLPRKGFPVVFHGVMGKDERE 804
Query: 793 GSGTSYVNRTEASNVEKITTRFIRC-GMK------PEQIGVITPYEGQRAFLVQHMQYQG 845
+ S+ N TE + ++ G K P IG+I PY Q + + + G
Sbjct: 805 ANSPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKLGPNDIGIIAPYRKQVEKIRKALNTVG 864
Query: 846 SLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSN------DHQ-GIGFLNDPRRLNVALT 898
L K +++I+V SV+ FQG+E+ +II+S VRS+ D IGFL++ +R NVA+T
Sbjct: 865 EL--KKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVKMDQDFNIGFLSNEKRFNVAMT 922
Query: 899 RAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQK 930
RAK +IV+GNP +LSK P W + + ++++
Sbjct: 923 RAKGLLIVVGNPVILSKDPTWQKFIQYCEQEQ 954
Score = 169 (64.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 66/193 (34%), Positives = 90/193 (46%)
Query: 638 KSLLDNADVICCTCVGAGDPRLLKI-----KFHSILIDESMQATEPECMVPV--ILGAK- 689
K L +I T V AG RL+ F I IDE+ QA EPEC++ + +L
Sbjct: 628 KETLIGYSIIVVTLVTAG--RLVSGGVAMGHFTHIFIDEAGQAVEPECIIGIAGLLDPLK 685
Query: 690 -QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGI-------------RPF--RLE 733
QL+L GD QLGPV+ A GL QSL ERL+ F +L
Sbjct: 686 GQLVLAGDPQQLGPVLRSPLAQLHGLGQSLLERLMKRNALYQKSQDDNSKYDSRFVTKLL 745
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQGQEE 790
YR HP + K P+ FYE LQ V A++ + W +P K P++F+ G++E
Sbjct: 746 RNYRSHPAILKIPNELFYENELQ--VFANQMEREAF-CQWEHLPRKGFPVVFHGVMGKDE 802
Query: 791 IAGSGTSYVNRTE 803
+ S+ N TE
Sbjct: 803 REANSPSFFNVTE 815
Score = 157 (60.3 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 60/173 (34%), Positives = 84/173 (48%)
Query: 442 GFSVDFIWK---STSFDRMQLALRKFAV--DDQSVSAYIYHRLLGHNV---DEVLFRCHL 493
GFS + K + FD ++ + +F + ++V + H L G+ + D+ L
Sbjct: 447 GFSRKLLQKFVNNMKFD-VEFNINRFPLRLQHRAVELAVQHAL-GNVLFPSDKDTGHSEL 504
Query: 494 PKHFSAPNLPDL--NRSQVYAVKHAIQ---RPLS-LIQGPPGTGKTVTSATIVYQLVKQT 547
P H S N DL N Q AV+H + RP LI GPPGTGKTVT + Q+ K
Sbjct: 505 P-HLSMFN-KDLENNPEQKAAVQHILSGSSRPAPYLIFGPPGTGKTVTVVEAIKQVDKSK 562
Query: 548 G-SPVLVCAPSNIAVDQLTEKI--HRTGLKVVRVCAKSREAIDSPVSFLALHN 597
S +L CAPSN A D L E++ H ++ R+CA SR+ P L N
Sbjct: 563 AQSHILACAPSNSACDLLCERLLGHVDAHRIYRLCAPSRDPRTVPQKLLKHSN 615
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 339 (124.4 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 102/314 (32%), Positives = 162/314 (51%)
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
K ++ ++ C+ +G K KF +IDE+ Q P C+ P+ L A++ +LVGDH
Sbjct: 1033 KHFYEDPQIVACSSLGVYHSIFNKRKFDYCIIDEASQIPLPICLGPLQL-AEKFVLVGDH 1091
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSKFPSNFFYEGSLQ 756
QL P+V + ++ GLS SLF+ L L +QYRM+ +++ S Y G+L
Sbjct: 1092 YQLPPLVKNSRTSKDGLSLSLFKLLSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLV 1151
Query: 757 NGVCADERK---LSKIDFPWPVPDKPM-LFYVTQ-----------GQEEIAG--SGTSYV 799
G +K L K +PD L +V + ++I G S T+ +
Sbjct: 1152 CGSKTISQKKLILPKAHLSDGLPDSSSSLHWVNKLINPSHSVIFFNTDDILGVESKTNNI 1211
Query: 800 --NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEV 857
N TEA +E+ + F+ G+K IG+I+ Y+ Q L +++ K + EIE+
Sbjct: 1212 LENHTEAFLIEQAVSSFLERGVKQSSIGIISIYKSQVELLSKNL--------KSFTEIEI 1263
Query: 858 ASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQ 916
+VD +QGR+KD+I++S VRSN +G L D RLNVAL+RAK I+ G+ LS
Sbjct: 1264 NTVDRYQGRDKDIILISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCIMFGSLSTLSSS 1323
Query: 917 PLWNNLLNFYKEQK 930
+ ++LL ++ K
Sbjct: 1324 NIVSHLLKLLEKNK 1337
Score = 100 (40.3 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 505 LNRSQVYAVK--HAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVD 562
LN Q+ A+K HA + SLI G PGTGKT T ++++ L+ + +L+ + +++AVD
Sbjct: 932 LNEDQITALKKCHAAEH-YSLILGMPGTGKTTTISSLIRSLLAKK-KKILLTSFTHLAVD 989
Query: 563 QLTEKIHRTGLKVVRV 578
+ K+ +VR+
Sbjct: 990 NILIKLKGCDSTIVRL 1005
Score = 38 (18.4 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 483 NVDEV--LFRCHLPKHFS 498
N D++ L +CH +H+S
Sbjct: 933 NEDQITALKKCHAAEHYS 950
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 217 (81.4 bits), Expect = 1.7e-31, Sum P(4) = 1.7e-31
Identities = 59/207 (28%), Positives = 104/207 (50%)
Query: 628 RYRMLKKNAE-KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
R + +K + + L ++ V+ C+G P ++ +F ++DE+ Q ++P C+ P+
Sbjct: 688 RSKSIKSVTDLEELYNSQPVVATACMGINHPIFVQKQFDFCIVDEASQISQPICLGPLFC 747
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
+K+ +LVGDH QL P+V +A G+S+SLF+RL +L VQYRM+ ++
Sbjct: 748 -SKRFVLVGDHQQLPPLVQNSEARDLGMSESLFKRLEQNQNAVVQLTVQYRMNSKIMSLS 806
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN 806
+ YEG L+ C E K+S +P+ ML + E A + +++ +
Sbjct: 807 NKLVYEGKLE---CGSE-KVSNATAN--LPNLKML------KLEFADASKTWLKEVLEPD 854
Query: 807 VEKITTRFIRCGMKPEQIGVITPYEGQ 833
+ G +P IG+I+PY Q
Sbjct: 855 KPVCFLNTEKAGCRPSDIGIISPYRHQ 881
Score = 178 (67.7 bits), Expect = 1.7e-31, Sum P(4) = 1.7e-31
Identities = 42/123 (34%), Positives = 72/123 (58%)
Query: 816 RCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE-IEVASVDAFQGREKDLIIMS 874
+ G +P IG+I+PY Q + M A++ + +EV ++D +QGR+K +II+S
Sbjct: 864 KAGCRPSDIGIISPYRHQLKVITDLM-------ARLKENRVEVNTIDKYQGRDKSIIIVS 916
Query: 875 CVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
VR+++ + +G L D RRLNVA+TRAK+ +I++G L + P LL + + ++
Sbjct: 917 FVRNSNDENLGALLKDWRRLNVAITRAKHKLIMVGCVPSLRRYPPLEKLLCHLQSEAMIF 976
Query: 934 EGP 936
P
Sbjct: 977 NLP 979
Score = 98 (39.6 bits), Expect = 1.7e-31, Sum P(4) = 1.7e-31
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 495 KHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
K A L LN+ Q A+K + R +LI G PGTGKT T +V +++ G VL+
Sbjct: 585 KEAVASILKGLNKPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALV-RILSACGFSVLL 643
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRV 578
+ ++ AVD + K+ + + +R+
Sbjct: 644 TSFTHTAVDNILLKLAKFKVGFLRL 668
Score = 45 (20.9 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 396 LKLRYSYDASKTWSGLGHVIKIPD 419
LKL ++ DASKTW L V++ PD
Sbjct: 835 LKLEFA-DASKTW--LKEVLE-PD 854
Score = 39 (18.8 bits), Expect = 1.7e-31, Sum P(4) = 1.7e-31
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 97 LPP-----HACKYCG-IHD 109
LPP ACKYC IH+
Sbjct: 352 LPPLIDDSQACKYCSQIHN 370
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 393 (143.4 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 135/440 (30%), Positives = 206/440 (46%)
Query: 518 QRPLSLIQGPPGTGKTVTSATIVYQLVKQ-----TGSPVLVCAPSNIAVDQLT---EKIH 569
Q+ L+++ GPPGTGKT T I+ Q V+Q +P V A N+ V++L +I
Sbjct: 202 QKELAIVHGPPGTGKTTTVVEIILQAVQQGLKVLCCAPSNV-AVDNL-VERLAGYKARIL 259
Query: 570 RTG--LKVVR-VCAKSREAI----DSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXS 622
R G +++ + S +A+ DS + I S
Sbjct: 260 RLGHPARLLEPIQQHSLDAVLARSDSAQIVADVRKDIDQAFAKSKKAQDKGERGHFLSEI 319
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIK----FHSILIDESMQATEP 678
A K + ++ A + L +A V+ T GA LK+ F ++IDE QA E
Sbjct: 320 KALRKELKEREETAMTAALTHASVVLATNTGASSDGPLKLLPENYFDLVVIDECAQALEA 379
Query: 679 ECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV-LGIRPFR-LEVQY 736
C +P +L A + IL GDH QL P ++ KAA GLS SL ER++ G + + L VQY
Sbjct: 380 SCWIP-LLKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLMERVIERYGEKVVKMLTVQY 438
Query: 737 RMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQG----Q 788
RMH + ++ S+ Y G L + L D P + P+L T G +
Sbjct: 439 RMHEAIMQWASSEMYGGRLTAHPSVAQHLLK--DLPGVTCTEETTIPLLLIDTAGCGLLE 496
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP 848
E+ S N E V + G+K + V+ PY Q L +H+ ++
Sbjct: 497 LEVEDE-QSKGNPGEVQLVGLHIQALVDAGVKARDVAVVAPYNLQVDMLREHLCHR---- 551
Query: 849 AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIG 908
Y E+E+ SVD FQGREK+ +I+S VRSN +GFL + RR+NVA+TRA+ + +I
Sbjct: 552 ---YPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAIIC 608
Query: 909 NPKVLSKQPLWNNLLNFYKE 928
+ + + Q LL +++
Sbjct: 609 DSRTVGSQAFLGRLLEHFRQ 628
Score = 38 (18.4 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 315 GLNKKSIAYFSLAKTDGDGYQYQNIFGP 342
GL + + F K D D N FGP
Sbjct: 54 GLYGRLLVTFQPRKYDSDSELPYNSFGP 81
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 196 (74.1 bits), Expect = 6.2e-31, Sum P(4) = 6.2e-31
Identities = 48/132 (36%), Positives = 72/132 (54%)
Query: 646 VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVM 705
V+ TC+G P + F ++DE+ Q T P C+ P+ + A+ +LVGDH QL P+V
Sbjct: 1259 VVATTCLGISHPLFNERTFDYCIVDEASQITLPICLGPIRM-ARTFVLVGDHNQLPPLVQ 1317
Query: 706 CKKAARAGLSQSLFERLVVLGIRP---FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD 762
++A + GL SLF+ L P LE QYRM ++ + YEG L+ G +
Sbjct: 1318 NEEARKGGLDVSLFKLLS--DTHPDSVVNLEHQYRMCEDVMALSNELIYEGHLKCGT--E 1373
Query: 763 ERKLSKIDFPWP 774
E +L K+D P+P
Sbjct: 1374 ELRLRKLDIPFP 1385
Score = 192 (72.6 bits), Expect = 6.2e-31, Sum P(4) = 6.2e-31
Identities = 50/141 (35%), Positives = 76/141 (53%)
Query: 776 PDKPMLFYVTQGQEEIA--GSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQ 833
PD + F T + G VN EA V ++ + G+ +IGV+T Y Q
Sbjct: 1429 PDTRVAFVNTDALPDSREEAKGNRIVNPVEAQLVVQLVESLMTLGVPANEIGVMTHYRSQ 1488
Query: 834 RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRR 892
A L++H +G +E+ + D FQGR+K+++++S VRSN+ IG L D RR
Sbjct: 1489 LA-LLKHKLLRGKNTGDA-TAVEMHTADRFQGRDKEVVVLSLVRSNEACHIGDLLRDWRR 1546
Query: 893 LNVALTRAKYGIIVIGNPKVL 913
+NVA TRAK ++VIG+ + L
Sbjct: 1547 INVAFTRAKTKLLVIGSRETL 1567
Score = 107 (42.7 bits), Expect = 6.2e-31, Sum P(4) = 6.2e-31
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN Q AV+ + + +L+ G PGTGKT T A I+ L++Q G VL+ + ++ AVD
Sbjct: 1150 LNVDQKKAVEKVMSAKDYALVLGMPGTGKTTTIAHIIRALIRQ-GKSVLLTSYTHSAVDN 1208
Query: 564 LTEKIHRTGLKVVRVCAKSR 583
+ K+ + V+R+ A ++
Sbjct: 1209 ILLKLKGDSIPVLRLGAPAK 1228
Score = 44 (20.5 bits), Expect = 6.2e-31, Sum P(4) = 6.2e-31
Identities = 21/90 (23%), Positives = 41/90 (45%)
Query: 272 LLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDV--GLNKKS-----IAYF 324
LL E+ + + ++G ++A +K+ + N+TV ++V G N S A +
Sbjct: 762 LLDVEE-HVWSPMYGLKGNIDATVQVTMKDGNNRRNLTVPFEVKTGKNVNSNHQAQTALY 820
Query: 325 SLAKTDGDGYQYQNIFGPLVKLEADYDKRL 354
+L +D Y + +G L +E R+
Sbjct: 821 NLLLSDR--YDIEIAYGILYYMETSQTIRI 848
Score = 41 (19.5 bits), Expect = 1.2e-30, Sum P(4) = 1.2e-30
Identities = 9/44 (20%), Positives = 22/44 (50%)
Query: 330 DGDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNK 373
D + + + ++G ++A +K+ + N+TV ++V K
Sbjct: 764 DVEEHVWSPMYGLKGNIDATVQVTMKDGNNRRNLTVPFEVKTGK 807
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 294 (108.6 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 94/268 (35%), Positives = 134/268 (50%)
Query: 690 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-----VLGIRPF------RLEVQYRM 738
Q++L GD QLGPVV + A+ GL SL ERL+ G R F +L YR
Sbjct: 837 QIVLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYNYRS 896
Query: 739 HPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW-PVPDK--PMLFYVTQGQEEIAGSG 795
H L PS FY G L V A + + W +P + P++F+ +G E G
Sbjct: 897 HEALLDLPSRLFYAGELC--VRAQRAAVDSLCH-WNKLPTRGFPLIFHGVRGSEMREGCN 953
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKP---EQIGVITPYEGQRAFLVQHMQYQGSLPAKIY 852
S+ N EA V + + P IGVI PY Q + +Q G
Sbjct: 954 PSWFNPAEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLLQRVG------L 1007
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQ-------GIGFLNDPRRLNVALTRAKYGII 905
E++V SV+ FQG+E ++I+S VRSN+ +GFL++P+R NVA+TRAK +I
Sbjct: 1008 GEVKVGSVEEFQGQEFLIMILSTVRSNESLLNEELQCMLGFLSNPKRFNVAITRAKALLI 1067
Query: 906 VIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
VIGNP VL K+P ++ LL + + + +
Sbjct: 1068 VIGNPHVLIKEPCFSALLQYSYDNRAFI 1095
Score = 229 (85.7 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 93/338 (27%), Positives = 145/338 (42%)
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXX 620
++ + + HR V VC S A D + + LH+ + ++S
Sbjct: 709 IEAILQVHHRISCSRVLVCTPSNSAAD--LICMRLHH---SGFLHSASLARVNATCRPEE 763
Query: 621 XSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKI-KFHSILIDESMQATEPE 679
S + ++Y ++ + V C+ G L++ F + +DE+ QATEPE
Sbjct: 764 SMSEELRQYARAGEDIRHASFHRIVVSTCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPE 823
Query: 680 CMVPVILGAK---QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV-----VLGIRPF- 730
++P+ L ++ Q++L GD QLGPVV + A+ GL SL ERL+ G R F
Sbjct: 824 TLIPLSLLSETSGQIVLAGDPKQLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFN 883
Query: 731 -----RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW---PVPDKPMLF 782
+L YR H L PS FY G L V A + + W P P++F
Sbjct: 884 PLLVTKLLYNYRSHEALLDLPSRLFYAGELC--VRAQRAAVDSLCH-WNKLPTRGFPLIF 940
Query: 783 YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
+ +G E G S+ N EA V + + P I R Q +
Sbjct: 941 HGVRGSEMREGCNPSWFNPAEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRK---QVEK 997
Query: 843 YQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSND 880
+ L E++V SV+ FQG+E ++I+S VRSN+
Sbjct: 998 IRVLLQRVGLGEVKVGSVEEFQGQEFLIMILSTVRSNE 1035
Score = 133 (51.9 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 503 PDLNRSQVYAVKHAIQ---RPLSLIQ-GPPGTGKTVTSATIVYQLVKQTG-SPVLVCAPS 557
PDLN +Q AV+ + RP + GPPGTGKT+T + Q+ + S VLVC PS
Sbjct: 671 PDLNAAQKQAVRRILSGESRPTPYVLFGPPGTGKTITLIEAILQVHHRISCSRVLVCTPS 730
Query: 558 NIAVDQLTEKIHRTG 572
N A D + ++H +G
Sbjct: 731 NSAADLICMRLHHSG 745
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 325 (119.5 bits), Expect = 4.6e-30, Sum P(2) = 4.6e-30
Identities = 99/334 (29%), Positives = 166/334 (49%)
Query: 628 RYRMLKKNAEKSLLDNAD-VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
R + +K A L N+ ++ TC+G P + F ++DE+ Q ++P C+ P+
Sbjct: 719 RSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFF 778
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
+++ +LVGDH QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++
Sbjct: 779 -SRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLS 837
Query: 747 SNFFYEGSLQNG------VCADERKLS----KIDFPWPVPDKPMLFYVTQGQEEIAGSGT 796
+ YEG L+ G + R +++F D P L V + + T
Sbjct: 838 NKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNT 897
Query: 797 SYV---NRTEASNVEKITTRFIRCGMKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPAKI 851
V + E V +T + + + +P + G A Q ++ L A+
Sbjct: 898 DKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARS 957
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNP 910
+EV +VD +QGR+K ++++S VRSN +G L D RRLNVA+TRAK+ +I++G
Sbjct: 958 IGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCV 1017
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL 944
L+ P LLN +K++++ P ESL
Sbjct: 1018 PSLNCYPPLEKLLNHLNSEKLIIDLPSRE-HESL 1050
Score = 97 (39.2 bits), Expect = 4.6e-30, Sum P(2) = 4.6e-30
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
H K A L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G
Sbjct: 613 HDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILYACGFS 671
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
VL+ + ++ AVD + K+ + + +R+
Sbjct: 672 VLLTSYTHSAVDNILLKLAKFKIGFLRL 699
Score = 44 (20.5 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 446 DFIWKSTS--FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF--RCHLPKHFSAPN 501
DF+ K+TS F +MQL+L D S + + +++E ++ R L
Sbjct: 223 DFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPM--DIEESIWSPRFGLKGKIDVTV 280
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
++R Y K+ I PL L G S ++Y L+ Q
Sbjct: 281 GVKIHRG--YKTKYKIM-PLELKTGKESNSIEHRSQVVLYTLLSQ 322
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 325 (119.5 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 99/334 (29%), Positives = 166/334 (49%)
Query: 628 RYRMLKKNAEKSLLDNAD-VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
R + +K A L N+ ++ TC+G P + F ++DE+ Q ++P C+ P+
Sbjct: 805 RSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFF 864
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
+++ +LVGDH QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++
Sbjct: 865 -SRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLS 923
Query: 747 SNFFYEGSLQNG------VCADERKLS----KIDFPWPVPDKPMLFYVTQGQEEIAGSGT 796
+ YEG L+ G + R +++F D P L V + + T
Sbjct: 924 NKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNT 983
Query: 797 SYV---NRTEASNVEKITTRFIRCGMKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPAKI 851
V + E V +T + + + +P + G A Q ++ L A+
Sbjct: 984 DKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARS 1043
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNP 910
+EV +VD +QGR+K ++++S VRSN +G L D RRLNVA+TRAK+ +I++G
Sbjct: 1044 IGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCV 1103
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL 944
L+ P LLN +K++++ P ESL
Sbjct: 1104 PSLNCYPPLEKLLNHLNSEKLIIDLPSRE-HESL 1136
Score = 97 (39.2 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
H K A L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G
Sbjct: 699 HDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILYACGFS 757
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
VL+ + ++ AVD + K+ + + +R+
Sbjct: 758 VLLTSYTHSAVDNILLKLAKFKIGFLRL 785
Score = 44 (20.5 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 446 DFIWKSTS--FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF--RCHLPKHFSAPN 501
DF+ K+TS F +MQL+L D S + + +++E ++ R L
Sbjct: 309 DFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPM--DIEESIWSPRFGLKGKIDVTV 366
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
++R Y K+ I PL L G S ++Y L+ Q
Sbjct: 367 GVKIHRG--YKTKYKIM-PLELKTGKESNSIEHRSQVVLYTLLSQ 408
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 213 (80.0 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 58/169 (34%), Positives = 93/169 (55%)
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR------CG-MKPEQIGVITPYE 831
P++F+ G++E S+ N E V + + ++ C + P++IG+I+PY
Sbjct: 540 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPYR 599
Query: 832 GQ----RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ----- 882
Q R + +LP I Q ++V SV+ FQG+E+ +I++S VRS
Sbjct: 600 KQVEKIRLAITSKDPVLRALP-DIGQ-LKVGSVEEFQGQERRVILISTVRSCSEYLQLDQ 657
Query: 883 --GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+GFL +P+RLNVALTRAK +IV+GN VLSK P W+ L + +++
Sbjct: 658 TFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDE 706
Score = 201 (75.8 bits), Expect = 2.9e-29, Sum P(2) = 2.9e-29
Identities = 101/352 (28%), Positives = 144/352 (40%)
Query: 504 DLNRSQVYAVKHAI---QRPLS-LIQGPPGTGKTVTSATIVYQLVKQ-TGSPVLVCAPSN 558
+ N Q AVKH + RP LI GPPGTGKTVT + Q+ + +L CAPSN
Sbjct: 258 EANEEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSN 317
Query: 559 IAVDQLTEKIHRTGLK---VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXX 615
A D L +++ T + + R+ A S D P N
Sbjct: 318 SAADLLCQRL-LTNIAPRYIYRIMASSANYKDVPADVRPCCNW----------------- 359
Query: 616 XXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF-----HSILID 670
EK Y K LL ++ T V AG RL+ F + ID
Sbjct: 360 -------DDSEKCYVY----PSKKLLKPYRILITTLVTAG--RLVSANFPPGYFSHVFID 406
Query: 671 ESMQATEPECMVPV--IL---------GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
E A EPE +V + +L QL+L GD QLGPV+ AA+ GL SL
Sbjct: 407 ECGHAVEPESVVAIAGLLTTMDPDTNRNGGQLVLAGDPQQLGPVLRSPLAAQHGLGTSLL 466
Query: 720 ERLVVL---------GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
ERL++ G P F +L YR H + K P+ FY+ L+ E +
Sbjct: 467 ERLMLHNALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDSELK-AYEGSEPDVR 525
Query: 768 KIDFPWP-VPDK--PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
W +P++ P++F+ G++E S+ N E V + + ++
Sbjct: 526 NFYCTWEELPNRGVPIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQ 577
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 315 (115.9 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 98/333 (29%), Positives = 165/333 (49%)
Query: 628 RYRMLKKNAE-KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
R R + A + L ++ V+ TC+G P + F ++DE+ Q ++P C+ P+
Sbjct: 719 RLRSIASLAHLEELYNSHPVVATTCMGISHPMFSRKTFDFCIVDEASQISQPICLGPLFF 778
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
+++ +LVGDH QL P+V+ ++A G+S+SLF+RL +L +QYRM+ ++
Sbjct: 779 -SRRFVLVGDHKQLPPLVLNREARALGMSESLFKRLERNESAVVQLTIQYRMNRKIMSLS 837
Query: 747 SNFFYEGSLQNG--------VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSY 798
+ YEG L+ G + K +++F D P L V + + T
Sbjct: 838 NKLTYEGKLECGSDRVANAVITLPNLKDVRLEFYADYSDNPWLAGVFEPDNPVCFLNTDK 897
Query: 799 V---NRTEASNVEKITTRFIRCGMKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPAKI-Y 852
V + E V +T + + I +P + G A Q ++ L A+
Sbjct: 898 VPAPEQIENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGIIAPYRQQLRTITDLLARSSV 957
Query: 853 QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNPK 911
+EV +VD +QGR+K LI++S VRSN+ +G L D RRLNVA+TRAK+ +I++G+
Sbjct: 958 GMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVAITRAKHKLILLGSVS 1017
Query: 912 VLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESL 944
L + P L + ++++ P ESL
Sbjct: 1018 SLKRFPPLEKLFDHLNAEQLISNLPSRE-HESL 1049
Score = 95 (38.5 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
H K A L LN+ Q A+K + + +LI G PGTGKT T +V +++ G
Sbjct: 613 HDAKDTVANILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICALV-RILSACGFS 671
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
VL+ + ++ AVD + K+ + + +R+
Sbjct: 672 VLLTSYTHSAVDNILLKLAKFKIGFLRL 699
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 213 (80.0 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 58/169 (34%), Positives = 93/169 (55%)
Query: 779 PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR------CG-MKPEQIGVITPYE 831
P++F+ G++E S+ N E V + + ++ C + P++IG+I+PY
Sbjct: 772 PIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPYR 831
Query: 832 GQ----RAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ----- 882
Q R + +LP I Q ++V SV+ FQG+E+ +I++S VRS
Sbjct: 832 KQVEKIRLAITSKDPVLRALP-DIGQ-LKVGSVEEFQGQERRVILISTVRSCSEYLQLDQ 889
Query: 883 --GIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
+GFL +P+RLNVALTRAK +IV+GN VLSK P W+ L + +++
Sbjct: 890 TFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDPHWHRFLRYCRDE 938
Score = 198 (74.8 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 101/352 (28%), Positives = 143/352 (40%)
Query: 504 DLNRSQVYAVKHAI---QRPLS-LIQGPPGTGKTVTSATIVYQLVKQ-TGSPVLVCAPSN 558
+ N Q AVKH + RP LI GPPGTGKTVT + Q+ + +L CAPSN
Sbjct: 490 EANEEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSN 549
Query: 559 IAVDQLTEKIHRTGLK---VVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXX 615
A D L +++ T + + R+ A S D P N
Sbjct: 550 SAADLLCQRL-LTNIAPRYIYRIMASSANYKDVPADVRPCCNW----------------- 591
Query: 616 XXXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF-----HSILID 670
EK Y K LL ++ T V AG RL+ F + ID
Sbjct: 592 -------DDSEKCYVY----PSKKLLKPYRILITTLVTAG--RLVSANFPPGYFSHVFID 638
Query: 671 ESMQATEPECMVPV--IL---------GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLF 719
E A EPE +V + +L QL+L GD QLGPV AA+ GL SL
Sbjct: 639 ECGHAVEPESVVAIAGLLTTMDPDTNPNGGQLVLAGDPQQLGPVPRSPLAAQHGLGTSLL 698
Query: 720 ERLVVL---------GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLS 767
ERL++ G P F +L YR H + K P+ FY+ L+ E +
Sbjct: 699 ERLMLHNALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDSELK-AYEGSEPDVR 757
Query: 768 KIDFPWP-VPDK--PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIR 816
W +P++ P++F+ G++E S+ N E V + + ++
Sbjct: 758 NFYCTWEELPNRGVPIIFHGVCGEDEREAKSPSFFNTAEIEVVVQYLQKLLQ 809
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 352 (129.0 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 107/313 (34%), Positives = 155/313 (49%)
Query: 632 LKKNAEKSLLDN---ADVICCTCVGAGDPRLLKI----KFHSILIDESMQATEPECMVPV 684
LK+ E +++ + ADV+ T GA LK+ F +++DE QA E C +P
Sbjct: 329 LKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPENHFDVVVVDECAQALEASCWIP- 387
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQYRMHPEL 742
+L A + IL GDH QL P + KAA AGLS+SL ERLV G R L VQYRMH +
Sbjct: 388 LLKAPKCILAGDHRQLPPTTISHKAALAGLSRSLMERLVEKHGAGAVRMLTVQYRMHQAI 447
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQEEIAGSGTSY 798
+++ S Y G L L D P + P+L T G +
Sbjct: 448 TRWASEAMYHGQLTAHPSVAGHLLK--DLPGVADTEETSVPLLLIDTAGCGLLELDEEDS 505
Query: 799 VNRTEASNVEKITTRF---IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
++ V +T + G+ I VI PY Q L Q SL K + E+
Sbjct: 506 QSKGNPGEVRLVTLHIQALVDAGVHAGDIAVIAPYNLQVDLLRQ------SLSNK-HPEL 558
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
E+ SVD FQGREK+ +I++ VRSN +GFL + RR+NVA+TRA+ + VI + + ++
Sbjct: 559 EIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNN 618
Query: 916 QPLWNNLLNFYKE 928
L++++ E
Sbjct: 619 HAFLKTLVDYFTE 631
Score = 229 (85.7 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 80/237 (33%), Positives = 120/237 (50%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
L+ SQ AV A+ Q+ +++I GPPGTGKT T I+ Q VKQ G +L CAPSN+AVD
Sbjct: 191 LDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQ-GLKILCCAPSNVAVDN 249
Query: 564 LTEKIHRTGLKVVRVCAKSR--EAID--SPVSFLALHNQIR-----NMEMNSXXXXXXXX 614
L E++ +++R+ +R E+ S + LA + + +++
Sbjct: 250 LVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDIDQVFGKNKKT 309
Query: 615 XXXXXXXSSADE-KRYRM-LKKNAEKSLLDN---ADVICCTCVGAGDPRLLKI--KFHSI 667
+ +E K R LK+ E +++ + ADV+ T GA LK+ + H
Sbjct: 310 QDKREKSNFRNEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPENHFD 369
Query: 668 LIDESMQATEPECMVPV-ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
++ A E + +L A + IL GDH QL P + KAA AGLS+SL ERLV
Sbjct: 370 VVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTISHKAALAGLSRSLMERLV 426
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 206 (77.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 48/139 (34%), Positives = 80/139 (57%)
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKI-YQ 853
G SY N EA R ++ G++P I +ITPY+GQ + + + M+ G+ +
Sbjct: 387 GFSYANLAEAKIAIGHYQRLLKYGVQPSDIAIITPYKGQTSLVTKLMEEFGAETGYTDFV 446
Query: 854 EIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
+ + +VD+ QG+E +++I + VRSN + +GF+++ RRLNV +TRAK + IGN +L
Sbjct: 447 QTTIGTVDSVQGKEYEVVIFTMVRSNPRKTMGFVSELRRLNVVITRAKRHFMFIGNGYLL 506
Query: 914 --SKQPLWNNLLNFYKEQK 930
SK+ L + +K K
Sbjct: 507 AESKKDEIRKLYDCFKNAK 525
Score = 196 (74.1 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 86/328 (26%), Positives = 141/328 (42%)
Query: 463 KFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQ--RP 520
++ ++D S + L H D + A +P N Q A+K A+ R
Sbjct: 25 QYTLEDNPESLTLQDVLESHMTDPIELNSFDSMEKEA-GIPFSNEKQRTAIKMALNENRK 83
Query: 521 LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA---VDQLTEK-IHRTGLKV- 575
L IQGPPGTGKT T ++ +L++Q V+V AP+ A + +T+K + R G+KV
Sbjct: 84 LVCIQGPPGTGKTFTLTLLLCRLIQQK-KQVVVLAPTREALANIRMMTKKTLKRMGIKVH 142
Query: 576 ---VRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRYRML 632
+ + R+ I+ L ++R++ S + R +
Sbjct: 143 EHALMDTNEYRDVINKSDRALMAAEEVRDLRKAFDNGEITENVLDEMRQSIINRVRNEV- 201
Query: 633 KKNAEKSLLDNADVICCTCVGAG--DPRLLKIKFHSIL--IDESMQATEPECMVPVILGA 688
AE ++ N V T +GA D + KF L IDE+ Q E + P +
Sbjct: 202 --GAE--VIGNVRVAFAT-IGASFVDFVMKHKKFDPCLCIIDEAAQVMEAQTW-PAVYKM 255
Query: 689 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFP 746
K++++ GD QL +V +A GL S+ +R++ LE QYR + +++ +
Sbjct: 256 KRIVMAGDPKQLPALVFTDEAKAFGLQNSVMDRILEKKNNFSWIMLENQYRSNAKIATWS 315
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWP 774
+ FY L+ V E L I P P
Sbjct: 316 NTCFYHNQLKTDVKCHEYSLHTILNPQP 343
Score = 57 (25.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 387 DMRLMQGDELK-LRYSYDASK-TWSGLGHVIK-IPDNFGDEVGLELKSSAGAPTEATTGF 443
D LM +E++ LR ++D + T + L + + I + +EVG E+ + AT G
Sbjct: 160 DRALMAAEEVRDLRKAFDNGEITENVLDEMRQSIINRVRNEVGAEVIGNVRVAF-ATIGA 218
Query: 444 S-VDFIWKSTSFD 455
S VDF+ K FD
Sbjct: 219 SFVDFVMKHKKFD 231
Score = 56 (24.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 280 QYQNIFGPLV----KLEADYDKRLKESQTQENVTVRWD-VGLNKKSIAYFSLAK 328
+++N+F PLV LE D +KRL +T E+ + + K+ +Y +LA+
Sbjct: 345 KFRNLFDPLVLIDTSLERDVEKRL---ETYEHAVFDTNSINKTKQGFSYANLAE 395
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 321 (118.1 bits), Expect = 8.9e-28, Sum P(4) = 8.9e-28
Identities = 97/333 (29%), Positives = 169/333 (50%)
Query: 623 SADEKR-YRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECM 681
S D+ R YR + + A K +D V+ CTC A L + IL+DE+ A+EPE +
Sbjct: 2544 SQDDLRWYRKVLQEARKFEVDRHRVLLCTCSCAASASLRDVNIRQILVDEAGLASEPETL 2603
Query: 682 VPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
+P++ ++ +++L+GDH QL PVV ++ GL +SL +R L++QY +H
Sbjct: 2604 IPLVSFSQVEKVVLLGDHKQLRPVVKSEQLQNLGLDRSLLQRY---RRDASMLDLQYCVH 2660
Query: 740 PELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIA------G 793
+ FPS FY+ L+ +L + + ++F Q EE G
Sbjct: 2661 ESICAFPSMEFYKKKLKTW---QGLRLPPSILGYGKENCSVIFGDVQSPEESLVVSTEEG 2717
Query: 794 SGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQ 853
S VN+ +A+ V + + + + P+ + ++TPY Q + + ++ A++
Sbjct: 2718 RENSKVNKEQAALVVCLAKQLVSGRVDPKDMAILTPYHAQVLEISKRLE-----EARV-A 2771
Query: 854 EIEVASVDAFQGREKDLIIMSCVRS---ND----------HQGIGFLNDPRRLNVALTRA 900
+ V S+ QGR+ +++S VR+ +D + +GFL DP ++NVALTRA
Sbjct: 2772 GVTVCSITKSQGRQWRYVLVSTVRTCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRA 2831
Query: 901 KYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV 933
+ G+ V+G+ +L PLW+ L+F + QK +V
Sbjct: 2832 QEGLWVVGDRLLLRCCPLWSRFLDFCEAQKSIV 2864
Score = 115 (45.5 bits), Expect = 8.9e-28, Sum P(4) = 8.9e-28
Identities = 34/87 (39%), Positives = 46/87 (52%)
Query: 497 FSAPN-LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVK---------- 545
F P L LN SQ AV+ A+++ ++I GPPGTGKTV I Y L +
Sbjct: 2376 FDMPGGLHKLNPSQNTAVREALKKQFTVIHGPPGTGKTVVGLHIAYWLCQSNEQAAARGP 2435
Query: 546 -----QTGSP-VLVCAPSNIAVDQLTE 566
Q G P +L+C+PS+ +VD L E
Sbjct: 2436 HGGDEQMGGPCLLLCSPSSKSVDVLAE 2462
Score = 42 (19.8 bits), Expect = 2.0e-21, Sum P(3) = 2.0e-21
Identities = 12/53 (22%), Positives = 22/53 (41%)
Query: 260 EKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQTQENVTVRW 312
+K +E P+Q L ++ + P +D RL+ +T +RW
Sbjct: 2498 KKTPQEERPNQTLRSITLHHRIRQASNPYAADIRAFDARLQNGETFSQDDLRW 2550
Score = 39 (18.8 bits), Expect = 8.9e-28, Sum P(4) = 8.9e-28
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 136 INHLVRAKHKEVT 148
++HL R +H EVT
Sbjct: 1765 LSHLRRDRHSEVT 1777
Score = 39 (18.8 bits), Expect = 8.9e-28, Sum P(4) = 8.9e-28
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 174 GFIPAKADSVVVLLCRTPCAAQNSLKDMNWD 204
G P SV+ +L R PC + WD
Sbjct: 1368 GHHPLPLGSVLSVLQRAPCKLVFVCRADEWD 1398
Score = 37 (18.1 bits), Expect = 8.9e-28, Sum P(4) = 8.9e-28
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 409 SGLGHVIKIPDNFGDEVGLELKSSA 433
S GH +++ G E L+++ SA
Sbjct: 2052 SQCGHFVEVARELGCEDALQVQFSA 2076
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 345 (126.5 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 106/313 (33%), Positives = 154/313 (49%)
Query: 632 LKKNAEKSLLDN---ADVICCTCVGAGDPRLLKIK----FHSILIDESMQATEPECMVPV 684
LK+ E +++ + ADV+ T GA LK+ F +++DE QA E C +P
Sbjct: 329 LKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLPEDYFDVVVVDECAQALEASCWIP- 387
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQYRMHPEL 742
+L A + IL GDH QL P + KAA AGLS+SL ERL G R L VQYRMH +
Sbjct: 388 LLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAI 447
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQEEIAGSGTSY 798
+++ S Y G L L D P + P+L T G +
Sbjct: 448 TRWASEAMYHGQLTAHPSVAGHLLK--DLPGVADTEETSVPLLLIDTAGCGLLELEEEDS 505
Query: 799 VNRTEASNVEKITTRF---IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
++ V +T + G++ I VI PY Q L Q SL K + E+
Sbjct: 506 QSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYNLQVDLLRQ------SLSNK-HPEL 558
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
E+ SVD FQGREK+ +I++ VRSN +GFL + RR+NVA+TRA+ + VI + ++
Sbjct: 559 EIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNN 618
Query: 916 QPLWNNLLNFYKE 928
L++++ E
Sbjct: 619 HAFLKTLVDYFTE 631
Score = 233 (87.1 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 79/236 (33%), Positives = 119/236 (50%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
L+ SQ AV A+ Q+ +++I GPPGTGKT T I+ Q VKQ G VL CAPSNIAVD
Sbjct: 191 LDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQ-GLKVLCCAPSNIAVDN 249
Query: 564 LTEKIHRTGLKVVRVCAKSR--EAID--SPVSFLALHNQIR-----NMEMNSXXXXXXXX 614
L E++ +++R+ +R E++ S + LA + + +++
Sbjct: 250 LVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKT 309
Query: 615 XXXXXXXSSADE-KRYRM-LKKNAEKSLLDN---ADVICCTCVGA---GDPRLLKIKFHS 666
+ +E K R LK+ E +++ + ADV+ T GA G +LL +
Sbjct: 310 QDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLPEDYFD 369
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
+++ + +L A + IL GDH QL P + KAA AGLS+SL ERL
Sbjct: 370 VVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERL 425
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 345 (126.5 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 106/313 (33%), Positives = 154/313 (49%)
Query: 632 LKKNAEKSLLDN---ADVICCTCVGAGDPRLLKIK----FHSILIDESMQATEPECMVPV 684
LK+ E +++ + ADV+ T GA LK+ F +++DE QA E C +P
Sbjct: 329 LKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLPEDYFDVVVVDECAQALEASCWIP- 387
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQYRMHPEL 742
+L A + IL GDH QL P + KAA AGLS+SL ERL G R L VQYRMH +
Sbjct: 388 LLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERLAEKHGAAVVRMLAVQYRMHQAI 447
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQEEIAGSGTSY 798
+++ S Y G L L D P + P+L T G +
Sbjct: 448 TRWASEAMYHGQLTAHPSVAGHLLK--DLPGVADTEETSVPLLLIDTAGCGLLELEEEDS 505
Query: 799 VNRTEASNVEKITTRF---IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
++ V +T + G++ I VI PY Q L Q SL K + E+
Sbjct: 506 QSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYNLQVDLLRQ------SLSNK-HPEL 558
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
E+ SVD FQGREK+ +I++ VRSN +GFL + RR+NVA+TRA+ + VI + ++
Sbjct: 559 EIKSVDGFQGREKEAVILTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNN 618
Query: 916 QPLWNNLLNFYKE 928
L++++ E
Sbjct: 619 HAFLKTLVDYFTE 631
Score = 233 (87.1 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 79/236 (33%), Positives = 119/236 (50%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
L+ SQ AV A+ Q+ +++I GPPGTGKT T I+ Q VKQ G VL CAPSNIAVD
Sbjct: 191 LDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQ-GLKVLCCAPSNIAVDN 249
Query: 564 LTEKIHRTGLKVVRVCAKSR--EAID--SPVSFLALHNQIR-----NMEMNSXXXXXXXX 614
L E++ +++R+ +R E++ S + LA + + +++
Sbjct: 250 LVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKT 309
Query: 615 XXXXXXXSSADE-KRYRM-LKKNAEKSLLDN---ADVICCTCVGA---GDPRLLKIKFHS 666
+ +E K R LK+ E +++ + ADV+ T GA G +LL +
Sbjct: 310 QDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLPEDYFD 369
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
+++ + +L A + IL GDH QL P + KAA AGLS+SL ERL
Sbjct: 370 VVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERL 425
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 300 (110.7 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 96/293 (32%), Positives = 148/293 (50%)
Query: 667 ILIDESMQATEPECMVPV---ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
+ +DE+ +TE E ++ + + LIL GDH QLGPV+ ++A GL +LFERL+
Sbjct: 690 VFVDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLL 749
Query: 724 ------VLGIRPFRLEVQ------YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDF 771
V + VQ +R HPE+ +N +YEG L+ + F
Sbjct: 750 QRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEAPMEIVCRFHNWF 809
Query: 772 PWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQ-----IGV 826
P P++F+ G S S N E V + G+ E+ IG+
Sbjct: 810 YLPNATFPIMFHSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGEKLLQTDIGI 869
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
I+PY+ Q Q +Q Q L + + +I+ SV+ FQG+EK +II+S VRS + +GF
Sbjct: 870 ISPYKNQ----YQRIQEQ--LNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSFTPK-LGF 922
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLV-EGPLN 938
LN+ RRLNV L+R +I+IGNP+ LS+ + +++ + +K LV E LN
Sbjct: 923 LNNERRLNVLLSRPISLLILIGNPRTLSQNSDFQHIIEMCRNRKTLVGEQYLN 975
Score = 101 (40.6 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 32/103 (31%), Positives = 54/103 (52%)
Query: 506 NRSQVYAVKHAIQRP-LS---LIQGPPGTGKTVTSATIVYQL-VKQTGSPVLVCAPSNIA 560
N Q+ AV+ P L ++ GPPGTGKT T +YQL + + + +LV A SN A
Sbjct: 541 NPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTA 600
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNME 603
D++ L+++R AK+ ++ P++ + N R ++
Sbjct: 601 CDEVA-------LRLLRAIAKAPQSQPRPLTRIFSANCDRRID 636
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 247 (92.0 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 66/232 (28%), Positives = 120/232 (51%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCA-DERKLSKIDFPWPVPDKPMLFYVTQGQE 789
+L YR HP + K P+ FY+ L+ R+ + P P++F+ G++
Sbjct: 749 KLLQNYRSHPSILKVPNELFYDNELKACADEISSRQYCTWEH-LPKRGFPVIFHGVVGKD 807
Query: 790 EIAGSGTSYVNRTEASNV----EKITTRFIRCGM---KPEQIGVITPYEGQRAFLVQHMQ 842
E + S+ N +E + +K+ + G+ P+ IG+I PY Q + Q ++
Sbjct: 808 ERESTSPSFFNTSEIDKIMDYLKKLLLTQAKKGIAKISPKDIGIIAPYRKQVEKIRQAIK 867
Query: 843 YQGSLPAKI-YQEIEVASVDAFQGREKDLIIMSCVRSN-------DHQGIGFLNDPRRLN 894
L + +E++V SV+ FQG+E+ +II+S VRS+ D IGFL + +R N
Sbjct: 868 IHRELKSLSGIEELKVGSVEEFQGQERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFN 927
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKESLIL 946
VA+TRAK +I++GNP +L +W +N+ +++ + +L+E+ ++
Sbjct: 928 VAVTRAKALLIMVGNPIILRTDEIWGRFMNYCIQERGYTGYDITHLEETDVI 979
Score = 186 (70.5 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 66/208 (31%), Positives = 101/208 (48%)
Query: 646 VICCTCVGAGDPRLLKIKF---H--SILIDESMQATEPECMVPV--ILGAK--QLILVGD 696
++ CT V AG RL+ F H I +DE+ A EPE ++ V +L A+ QL+L GD
Sbjct: 645 IVVCTLVTAG--RLVSGGFPVGHFSHIFVDEAGHAVEPEIVISVAGLLNAETGQLVLAGD 702
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVL------GIRPF------RLEVQYRMHPELSK 744
QLGP++ A + GL SL ERL+ G F +L YR HP + K
Sbjct: 703 PKQLGPILRSPFAIKYGLGLSLLERLMTQNELYQKGDTGFDNRYVTKLLQNYRSHPSILK 762
Query: 745 FPSNFFYEGSLQNGVCADERKLSKIDFPWP-VPDK--PMLFYVTQGQEEIAGSGTSYVNR 801
P+ FY+ L+ CADE S+ W +P + P++F+ G++E + S+ N
Sbjct: 763 VPNELFYDNELK--ACADEIS-SRQYCTWEHLPKRGFPVIFHGVVGKDERESTSPSFFNT 819
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITP 829
+E + + + K + I I+P
Sbjct: 820 SEIDKIMDYLKKLLLTQAK-KGIAKISP 846
Score = 151 (58.2 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 78/275 (28%), Positives = 122/275 (44%)
Query: 336 YQNIFGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDMRLMQGDE 395
Y + F L+ LE D + + +++V++ D +KK + ++ +++GD
Sbjct: 366 YMDRFDLLLYLEEDQMRMDIKRYNKKDVSMVRD--RDKKLLVLELPGVSENRPSVLRGDH 423
Query: 396 LKLRYSYDASKT----WSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKS 451
L L S + + + G H +++ D+V L FSV+F
Sbjct: 424 LLLTKSEELQNSNVTKYKGYVHRVEL-----DQVKLGFSKRLLERFIDNMKFSVEF---- 474
Query: 452 TSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF----RCHLPKHFSAPNLPDL-- 505
+ +R+ L L+ AV H ++ H++ +VLF R P SA L D
Sbjct: 475 -TINRLPLRLQHRAV----------HMVVQHHLKDVLFPVASRRLNPVSPSALRLFDQKL 523
Query: 506 --NRSQVYAVKHAI---QRPLS-LIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSN 558
N Q AV + + +P L+ GPPGTGKTVT + Q+ K TG +L CAPSN
Sbjct: 524 EKNPEQKTAVCNIVAGTSKPAPYLVFGPPGTGKTVTIVEAIKQVEKNTGGARILACAPSN 583
Query: 559 IAVDQLTEKI----HRTGLKVVRVCAKSREAIDSP 589
A DQL EK+ H + R+ A SR + P
Sbjct: 584 SAADQLGEKLITSQHVDARNIYRIYASSRNPKEIP 618
Score = 44 (20.5 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 927 KEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
+E+KV++ + + KE +IL K F KN
Sbjct: 892 QERKVIIVSTVRSSKEHIILDDKFNIGFLKN 922
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 316 (116.3 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 95/322 (29%), Positives = 160/322 (49%)
Query: 628 RYRMLKKNAEKSLLDNAD-VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
R + +K A L N+ ++ TC+G P + F ++DE+ Q ++P C+ P+
Sbjct: 41 RSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFF 100
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
+++ +LVGDH QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++
Sbjct: 101 -SRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKSAVVQLTVQYRMNSKIMSLS 159
Query: 747 SNFFYEGSLQNG------VCADERKLS----KIDFPWPVPDKPMLFYVTQGQEEIAGSGT 796
+ YEG L+ G + R +++F D P L V + + T
Sbjct: 160 NKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNT 219
Query: 797 SYV---NRTEASNVEKITTRFIRCGMKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPAKI 851
V + E V +T + + + +P + G A Q ++ L A+
Sbjct: 220 DKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARS 279
Query: 852 YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNP 910
+EV +VD +QGR+K ++++S VRSN +G L D RRLNVA+TRAK+ +I++G
Sbjct: 280 IGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILLGCV 339
Query: 911 KVLSKQPLWNNLLNFYKEQKVL 932
L+ P LLN +K++
Sbjct: 340 PSLNCYPPLEKLLNHLNSEKLI 361
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 205 (77.2 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 61/196 (31%), Positives = 97/196 (49%)
Query: 662 IKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
+ F +++DE+ Q+ E E + P+I +L+LVGD QL P V+ KA G QS+ R
Sbjct: 22 VPFSCVIVDEAGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMAR 81
Query: 722 LV----------VLGIRP-FRLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKID 770
++G P +L +QYRMHP++ FPSN+ Y +L+ + + S
Sbjct: 82 FCKLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTNRLTETIRCSS-- 139
Query: 771 FPWPVPDKPML-FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKP---EQIGV 826
WP +P L F V G E+ SY+N E V +I + I+ K IG+
Sbjct: 140 -EWPF--QPYLVFDVGDGSEQ--RDNDSYINVQEIKLVMEII-KLIKEKRKDISFRNIGI 193
Query: 827 ITPYEGQRAFLVQHMQ 842
IT Y+ Q+ + + ++
Sbjct: 194 ITHYKAQKTMIQKDLE 209
Score = 177 (67.4 bits), Expect = 3.6e-27, Sum P(2) = 3.6e-27
Identities = 38/103 (36%), Positives = 64/103 (62%)
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQG-IGFLNDPRRLNVALTRAKYGIIVIGNPKVLS 914
EV +VDAFQGR+KD II++CVR++ QG IGFL +RLNV +TRAKY + ++G+ + L
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLM 333
Query: 915 KQPLWNNLLNFYKEQKVLVEGPLNNLKESLILFSKPKQYFKKN 957
+ W L+ +++ +++ N + + K K +++
Sbjct: 334 ENQHWYELIQDAQKRGAIIKTCDPNYRHDAMKILKLKPVLQRS 376
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 332 (121.9 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 103/313 (32%), Positives = 152/313 (48%)
Query: 632 LKKNAEKSLLDN---ADVICCTCVGAGDPRLLKIK----FHSILIDESMQATEPECMVPV 684
LK+ E +++ + ADV+ T GA LK+ F +++DE QA E C +P
Sbjct: 329 LKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPEDYFDVVVVDECAQALEASCWIP- 387
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQYRMHPEL 742
+L A + IL GDH QL P + +AA AGLS+SL ERL G R L VQYRMH +
Sbjct: 388 LLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLMERLAEKHGAGVVRMLTVQYRMHQAI 447
Query: 743 SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDK----PMLFYVTQGQEEIAGSGTSY 798
+ S Y G + L D P + P+L T G +
Sbjct: 448 MCWASEAMYHGQFTSHPSVAGHLLK--DLPGVTDTEETRVPLLLIDTAGCGLLELEEEDS 505
Query: 799 VNRTEASNVEKITTRF---IRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
++ V +T + G++ I VI PY Q L Q SL K + E+
Sbjct: 506 QSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAPYNLQVDLLRQ------SLSNK-HPEL 558
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSK 915
E+ SVD FQGREK+ ++++ VRSN +GFL + RR+NVA+TRA+ + VI + ++
Sbjct: 559 EIKSVDGFQGREKEAVLLTFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNN 618
Query: 916 QPLWNNLLNFYKE 928
L++++ E
Sbjct: 619 HAFLETLVDYFTE 631
Score = 234 (87.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 80/236 (33%), Positives = 119/236 (50%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
L+ SQ AV A+ Q+ L++I GPPGTGKT T I+ Q VKQ G VL CAPSNIAVD
Sbjct: 191 LDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQ-GLKVLCCAPSNIAVDN 249
Query: 564 LTEKIHRTGLKVVRVCAKSR--EAID--SPVSFLALHN--QI-----RNMEMNSXXXXXX 612
L E++ +++R+ +R E++ S + LA + QI R+++
Sbjct: 250 LVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKT 309
Query: 613 XXXXXXXXXSSADEKRYRMLKKNAEKSLLDN---ADVICCTCVGA---GDPRLLKIKFHS 666
S + + LK+ E +++ + ADV+ T GA G +LL +
Sbjct: 310 QDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPEDYFD 369
Query: 667 ILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERL 722
+++ + +L A + IL GDH QL P + +AA AGLS+SL ERL
Sbjct: 370 VVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLMERL 425
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 287 (106.1 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 98/326 (30%), Positives = 159/326 (48%)
Query: 635 NAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILV 694
+A + L ++ V+ TC+G P + +F ++DE+ Q ++P C+ P+ A + +LV
Sbjct: 728 SALEELYNSQPVVATTCMGVNHPIFTRRRFDFCIVDEASQISQPICLGPLFF-ADRFVLV 786
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGS 754
GDH QL P+V +A G+S+SLF+RL +L VQYRM+ ++ + YEG
Sbjct: 787 GDHQQLPPLVKSAEARELGMSESLFKRLERNQEAVVQLTVQYRMNSKIMALSNKLVYEGR 846
Query: 755 LQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN-VEKITTR 813
L+ CA +R + + +P L + +E V E SN V + T
Sbjct: 847 LE---CASDRVSNAVV---QLPHIKTLLLELEFRESQESMWIKDV--LEPSNPVCFLNTE 898
Query: 814 FIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPAKI-----YQE------------- 854
I E+ G+ E + F + + + G P+ I Y++
Sbjct: 899 KIPALETEEKGGISNWIEAKLVFHLTKLYLKAGCRPSDIGIIAPYRQQLKMISNYFNSLS 958
Query: 855 ---IEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNP 910
+EV +VD +QGR+K +II+S VRSN +G L D RRLNVALTRAK+ +I++G
Sbjct: 959 ASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLGCV 1018
Query: 911 KVLSKQPLWNNLLNFYKEQKVLVEGP 936
L++ L+ K + + + P
Sbjct: 1019 PTLNRFDCLEQLICNLKTENQIYDLP 1044
Score = 99 (39.9 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 495 KHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
K A L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G VL+
Sbjct: 617 KDIVASILRGLNKPQKQAMKRVLLSKDYTLIVGMPGTGKTTTICTLV-RILYACGFSVLL 675
Query: 554 CAPSNIAVDQLTEKIHRTGLKVVRV 578
+ ++ AVD + K+ + + +R+
Sbjct: 676 TSYTHSAVDNILLKLKKFQVGFLRL 700
Score = 40 (19.1 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 430 KSSAGAPTEAT 440
KS+AG PTE T
Sbjct: 244 KSTAGDPTETT 254
Score = 39 (18.8 bits), Expect = 3.0e-19, Sum P(3) = 3.0e-19
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTG-KTVTSATIVYQLVKQTG----SPVLVCAPSNI 559
L+R ++ +++ + L+ + G K T A++ + + S + CA N
Sbjct: 350 LDRRELLKIRNELSYYLTNVLHKSDNGSKETTLASLPAMIADRQACKYCSQMRNCALYNR 409
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAI-DSPVSFLALHNQIRNMEMNS 606
+V+Q TE + +++ V K E + + + + L + +E NS
Sbjct: 410 SVEQQTENCYIPP-EMIPVVQKETEHLTEDHLQYFRLWYLMCTLEANS 456
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 162 (62.1 bits), Expect = 5.4e-25, Sum P(5) = 5.4e-25
Identities = 43/127 (33%), Positives = 65/127 (51%)
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
K L+ ++ +C+G LLK++F +IDE+ ++P M P IL K +LVGDH
Sbjct: 1425 KQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGP-ILKCKSFVLVGDH 1483
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQ 756
QL P+V K+A + GL SLF++L L QYRM + ++ Y L
Sbjct: 1484 HQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRL- 1542
Query: 757 NGVCADE 763
VC ++
Sbjct: 1543 --VCGNQ 1547
Score = 158 (60.7 bits), Expect = 5.4e-25, Sum P(5) = 5.4e-25
Identities = 35/91 (38%), Positives = 56/91 (61%)
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIG 908
K + +++ ++D FQG++KD II+S VRSN+ + IG + D +R+NVA TRAK +I +G
Sbjct: 1746 KKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVG 1805
Query: 909 NPKVLSKQPLWNNLLNFYKEQKVLVEGPLNN 939
+ LSK P + + F + + LNN
Sbjct: 1806 SKSSLSKFPFFLDFFEFLDSKNWIYN--LNN 1834
Score = 93 (37.8 bits), Expect = 5.4e-25, Sum P(5) = 5.4e-25
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 503 PDLNRSQVYAV-KHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAV 561
P LN Q A+ K + SLI G PGTGKT ++++ ++ + G VL+ + ++ ++
Sbjct: 1320 PLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIH-ILWRLGKKVLITSFTHTSL 1378
Query: 562 DQLTEKIHRT--GLKVVRVCAKSREAIDSPVSFLALHNQ 598
D L K ++ ++++RV A S ID + L Q
Sbjct: 1379 DHLLLKFNKQYPNIEMLRV-ASSLNQIDPSLHRFTLEKQ 1416
Score = 68 (29.0 bits), Expect = 5.4e-25, Sum P(5) = 5.4e-25
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 773 WPV----PDKPMLFYVTQ--GQEEIAGSGTSYVNRTEASNVEKITTRFI-RCGMKPEQIG 825
WP P+ ++F T + +G + N+TEA+ V +T I + + QIG
Sbjct: 1577 WPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIG 1636
Query: 826 VITPYEGQRAFL 837
+ITP Q F+
Sbjct: 1637 IITPIRFQLNFI 1648
Score = 48 (22.0 bits), Expect = 5.4e-25, Sum P(5) = 5.4e-25
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 38 FTLPSQSQTQASQLDSVNQIQVNGKQ 63
F LPS S + AS L N I++N ++
Sbjct: 787 FILPSSSSSSASSLKK-NLIEINSEK 811
Score = 40 (19.1 bits), Expect = 3.4e-24, Sum P(5) = 3.4e-24
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 43 QSQTQASQLDSVNQIQVNGKQNLDNSNLN 71
QS+ + Q S N N N +N+N N
Sbjct: 860 QSKKKKQQTTSPNNNNNNNNNNNNNNNNN 888
Score = 39 (18.8 bits), Expect = 4.3e-24, Sum P(5) = 4.3e-24
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 32 EFDFTDFTLPSQSQTQASQLDSVNQIQVNGKQNLDNSNLN 71
EF F D P + + ++ N N N +N+N N
Sbjct: 502 EFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNN 541
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 199 (75.1 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 62/211 (29%), Positives = 99/211 (46%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSL----QNGVCADERKLSKIDFPWPVP-DKPM----L 781
+L YR P + S FY+ L + R LSK+ + D P
Sbjct: 1029 KLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDIPQAHGTF 1088
Query: 782 FYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHM 841
FY G+ S+ N E V +T R + +QIG+ITPY+ Q L
Sbjct: 1089 FYGIIGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQIGIITPYQKQVKML--RS 1146
Query: 842 QYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ-------GIGFLNDPRRLN 894
+ G+ + ++ SV+ FQG+E+D+I++S VRS++ +GF+ +RLN
Sbjct: 1147 MFIGT---DVVMP-KIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRLN 1202
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNF 925
VA++RA+ +I+ GNP +L+ W L+ F
Sbjct: 1203 VAVSRARAMMIIFGNPHLLAVDECWRQLILF 1233
Score = 181 (68.8 bits), Expect = 5.4e-25, Sum P(2) = 5.4e-25
Identities = 65/229 (28%), Positives = 101/229 (44%)
Query: 526 GPPGTGKTVTSATIVYQLVKQT-GSPVLVCAPSNIAVDQLTEKIHRTGLKVVRVCAKSRE 584
GPPG+GKT+T + QLV+ G+ +LV PSN + D +T+++ S+
Sbjct: 809 GPPGSGKTMTLIETLLQLVRNLPGARILVGTPSNSSADLVTKRL-----------IDSKA 857
Query: 585 AIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRYRM--LKKNAEKSLLD 642
+ L +NQ+ + S D+ LK + +
Sbjct: 858 LLQGDFIRLVSYNQVEKDLIPPEIMSYCATSDVGAVGSCEDKMMVTESGLKLRCQAKFIG 917
Query: 643 NADVICCTCVGAGDPRLLKIK---FHSILIDESMQATEPECMVPVILGAK---QLILVGD 696
+ TC G+ L F +L DE+ Q TEPE MVP+++ K Q++L GD
Sbjct: 918 THRITISTCTTLGNFLQLGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGD 977
Query: 697 HCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKF 745
QL +V + A++ G S S ERL L P+R ++Q PE S +
Sbjct: 978 PRQLQSIVTSRIASKMGFSISFLERL--LERSPYRKDLQ--RFPESSGY 1022
Score = 38 (18.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 97 LPPHACKYCGIHDPAYVIMC 116
+PP YC D V C
Sbjct: 877 IPPEIMSYCATSDVGAVGSC 896
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 276 (102.2 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 92/340 (27%), Positives = 163/340 (47%)
Query: 627 KRYRMLKKNAEKSLLDNADVICCTCVGAGD--PRLLKIKFHSILIDESMQATEPECMVPV 684
+ ++ + + ++ +I T G P L K+ ++++E+ + E + +
Sbjct: 1422 ENFKNAQNRVDAEIMRMTMIIGATTTGCSRLRPTLEKVGPRILIVEEAAEVLEAHIISAM 1481
Query: 685 ILGAKQLILVGDHCQLGPVVMCKKAARA-GLSQSLFERLVVLGIRPF-RLEVQYRMHPEL 742
I + ++++GDH QL P + A GL S+FERLV G+ PF +L Q+RM+ +
Sbjct: 1482 ISTVEHVVMIGDHKQLRPNPAVHELGVAYGLRISMFERLVERGL-PFSQLRQQHRMNLTI 1540
Query: 743 S-KFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNR 801
S K FY+ N A+ L +P LF+ + E + S++N+
Sbjct: 1541 SDKIVKLSFYD----NVTDAENVGL----YPDVQGMATNLFFWSHTSMEESPDEVSWLNK 1592
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLV-QHMQYQGSLPAKIYQEIEVASV 860
E S + ++ I V+ Y Q+ + ++ GS P I V +V
Sbjct: 1593 HEISMTVALVKHLLKQNYTTNDIVVLATYSAQKNLMYREYANVFGSTPDS--NVIPVETV 1650
Query: 861 DAFQGREKDLIIMSCVRSN----DHQGIGFLNDPRRLNVALTRAKYGIIVIGNPK-VLSK 915
D+FQG+E+ ++I+S VRS+ ++ GIGFL R+ VALTRA++G+ +IGN +++
Sbjct: 1651 DSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTRAQHGMYIIGNGAYIMNN 1710
Query: 916 QPLWNNLLNFYKEQKVLVEG-PLNNLKESLILFSKPKQYF 954
LWN ++N + ++ PL + I+ K Q F
Sbjct: 1711 SELWNKIVNNLRRSNLIEYNLPLKCVAHGNIVTVKDPQDF 1750
Score = 107 (42.7 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 503 PD-LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTG-----SPVLVCAP 556
PD ++ SQ A + + LSLIQGPPGTGKT IV +++ P+LV
Sbjct: 1037 PDYMDESQRLAFCNTFKYELSLIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCF 1096
Query: 557 SNIAVDQLTEKIHR 570
+N +D L E+I++
Sbjct: 1097 TNSGLDNLLERIYQ 1110
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 270 (100.1 bits), Expect = 9.8e-25, Sum P(2) = 9.8e-25
Identities = 93/308 (30%), Positives = 154/308 (50%)
Query: 625 DEKR-YRMLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKIKFH--SILIDESMQAT 676
DE R + +L+ +++ L+ A +I TC A R L+K+ F +I+++E+ Q
Sbjct: 1011 DEFRAFELLRNGRDRTEYLLVKEAKIIAMTCTHAALRRNELVKLGFRYDNIVMEEAAQIL 1070
Query: 677 EPECMVPVIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGI 727
E E +P++L G +L I++GDH QL PVV + + + + QSLF RLV L +
Sbjct: 1071 EVETFIPLLLQNPQDGHNRLKRWIMIGDHHQLPPVVQNQAFQKYSNMEQSLFARLVRLSV 1130
Query: 728 RPFRLEVQYRMHPELSK-FPSNFFYEGSLQN--GVCADERKLSKIDFPWPVPDKPMLFYV 784
+L+ Q R ++++ + + G+L + G+ + + FP+ D P
Sbjct: 1131 PNVQLDRQGRARAQIAELYQWRYNGLGNLPHVDGLPQFQNANAGFAFPFQFIDIPDF--- 1187
Query: 785 TQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
G E S Y N EA + T G E+I ++T Y GQ + Q +
Sbjct: 1188 -NGHGETQPSPHFYQNLGEAEYACALYTYMRILGYPAEKISILTTYNGQAQLIRDVFQRR 1246
Query: 845 GSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGI 904
I +V++VD +QG++ D II+S V++ + IG + D RRL VAL+RA+ G+
Sbjct: 1247 CDTNPLIGMPAKVSTVDKYQGQQNDFIILSLVKTRN---IGHIRDVRRLVVALSRARLGL 1303
Query: 905 IVIGNPKV 912
V+G KV
Sbjct: 1304 YVLGRSKV 1311
Score = 107 (42.7 bits), Expect = 9.8e-25, Sum P(2) = 9.8e-25
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ-TGSPVLVCAPSNIAVDQLTE 566
SQV A+K +Q L+++ GPPGTGKT + I+ + L+ SN A++QL E
Sbjct: 809 SQVEAIKSGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNWPNQRTLIVTHSNQALNQLFE 868
Query: 567 KI 568
KI
Sbjct: 869 KI 870
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 261 (96.9 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 90/301 (29%), Positives = 148/301 (49%)
Query: 627 KRYRMLKKNAEKS---LLDNADVICCTCVGAGDPRL----LKIKFHSILIDESMQATEPE 679
+ + +LK A+++ + A ++ TC A R L K+ ++L++ES Q E E
Sbjct: 1073 RAFELLKSTADRANYLMTKQAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIE 1132
Query: 680 CMVPVIL-----G---AKQLILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPF 730
+P++L G K+ IL+GDH QL PVV + + + QSLF R V LGI
Sbjct: 1133 TFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPYI 1192
Query: 731 RLEVQYRMHPELSKFPSNFFYEG----SLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQ 786
L Q R P L+K N+ Y S+ +R + + + + + P Y +
Sbjct: 1193 ELNAQGRARPSLAKL-YNWRYRDLGDLSIVKEAPIFQRANAGFSYEYQLVNVPD--Y--E 1247
Query: 787 GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGS 846
G+ E S Y N+ EA + + G +I ++T Y GQ+ L++ + +
Sbjct: 1248 GRGESTPSPWFYQNQGEAEYIVSVYIYMRLLGYPANKISILTTYNGQK-LLIRDVINRRC 1306
Query: 847 LPAK-IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGII 905
+P I +V +VD FQG++ D I++S VR+ + +G L D RRL VA++RA+ G+
Sbjct: 1307 VPYPFIGPPSKVTTVDKFQGQQNDFILLSLVRT---RFVGHLRDVRRLVVAMSRARLGLY 1363
Query: 906 V 906
V
Sbjct: 1364 V 1364
Score = 99 (39.9 bits), Expect = 6.7e-23, Sum P(2) = 6.7e-23
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIAVDQLTE 566
+QV A+ IQ L+++ GPPGTGKT T+ I+ L S L+ SN A++ L E
Sbjct: 869 TQVGAIISGIQPGLTMVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFE 928
Query: 567 KI 568
KI
Sbjct: 929 KI 930
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 264 (98.0 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 87/310 (28%), Positives = 148/310 (47%)
Query: 646 VICCTCVGAGDPRL-LKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVV 704
VI TC+ D L+ F ++DE+ Q T P + P+ AK+ ++VGDH QL P+V
Sbjct: 1076 VIATTCLSITDVCFNLRYSFDYCIVDEASQITLPVSLGPLRF-AKKFVMVGDHDQLQPLV 1134
Query: 705 MCK-KAARAGLSQSLFERLVVLGIRPF-RLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD 762
K + LS+SLF L L QYRM+ ++ + Y L+ G
Sbjct: 1135 THPDKRVKQELSRSLFSLLAKEHPDSVSHLTYQYRMNSDIMNVCNTLIYNNKLKCGSEQV 1194
Query: 763 ERKLSKIDFPWPV---------PDKPMLFYVTQGQEEIA------------GSGTSYVNR 801
+ KI P + PD + + + + G +N
Sbjct: 1195 AQNSLKIPHPEVLNSFIGEDVSPDSQWIHKIFDEKNNVLFLDYDAVPAVEENVGEMVINT 1254
Query: 802 TEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVD 861
EA +++I + G+K ++IGV++ Y Q + L +++ +L +++E+ + D
Sbjct: 1255 KEALLIQQIVNALVHGGVKEDEIGVMSFYRAQLSVLKKNLN---NL-----KDLEILTAD 1306
Query: 862 AFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWN 920
+QGR+K+ II+S VRSN+ + G + + RRLNVA TRAK +I++G+ LS L
Sbjct: 1307 QYQGRDKECIIISLVRSNERKFAGDLMKEYRRLNVATTRAKTKLIILGSRFTLSTNELTK 1366
Query: 921 NLLNFYKEQK 930
+++ + +K
Sbjct: 1367 TFIDYLENEK 1376
Score = 102 (41.0 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 28/80 (35%), Positives = 42/80 (52%)
Query: 500 PNLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSN 558
P+ N Q+ A+K SLI G PGTGKT A ++ LV Q S VL+ + +N
Sbjct: 962 PDAETFNPDQIAALKKVFSADDYSLIVGMPGTGKTTVIAQLIKVLVAQRKS-VLLTSYTN 1020
Query: 559 IAVDQLTEKIHRTGLKVVRV 578
AVD + K+ ++ +R+
Sbjct: 1021 SAVDNILLKLKDLDIEFLRI 1040
Score = 39 (18.8 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 419 DNFGDEVGLELKSSAGAPTEA-TTGFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAYIYH 477
D F D+ EL T + T+ F+ F +F+++ + + D + VS IY
Sbjct: 314 DPFTDDDS-ELMEVLKTQTPSVTSAFTKSFQRGIQNFEKLNIENKYEEQDIEKVSDLIYD 372
Query: 478 RL 479
R+
Sbjct: 373 RV 374
Score = 37 (18.1 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 10/53 (18%), Positives = 21/53 (39%)
Query: 221 LVKVPTEQEQQRGRQVTSAQIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLL 273
L+ + + + V + +LE D D +P + +D H +L+
Sbjct: 397 LILEVVNSSRDKSKLVVRGEYCELELEKGDVIHVIITDSARPTLVDDMHNLLI 449
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 248 (92.4 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 65/181 (35%), Positives = 102/181 (56%)
Query: 772 PWPV----PDKPMLFYVTQ---GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
PW + P+ P+ F T E++ G S N TEA + +T+ FI+ G KP I
Sbjct: 459 PWMIGAFEPNNPVCFLNTDKVPAPEQVEKGGVS--NITEAKLIVFLTSVFIKAGCKPSDI 516
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+I PY Q+ ++ + + S+ + +EV +VD +QGR+K +I++S VRSN I
Sbjct: 517 GIIAPYR-QQLKIINDLLFHSSI-----RMVEVNTVDKYQGRDKSIILVSFVRSNKDGPI 570
Query: 885 G-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
G L D RRLNVA+TRAK+ +I++G L++ P LL+ +K++++ P ES
Sbjct: 571 GELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLNSEKLIMDLPSEE-HES 629
Query: 944 L 944
L
Sbjct: 630 L 630
Score = 215 (80.7 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 73/267 (27%), Positives = 127/267 (47%)
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+ L ++ ++ TC+G P + F ++DE+ Q ++P C+ P+ +++ +LVGDH
Sbjct: 309 EELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFF-SQRFVLVGDH 367
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQ- 756
QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++ + Y+G L+
Sbjct: 368 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLEC 427
Query: 757 ------NGVC----ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV---NRTE 803
N V + KL +++F + P + + + T V + E
Sbjct: 428 GSDKVANAVVNLPNLKDVKL-ELEFYADYSENPWMIGAFEPNNPVCFLNTDKVPAPEQVE 486
Query: 804 ASNVEKITTRFIRCGMKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPA-KIYQEIEVASV 860
V IT + + I P + G A Q ++ L + +EV +V
Sbjct: 487 KGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVNTV 546
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFL 887
D +QGR+K +I++S VRSN IG L
Sbjct: 547 DKYQGRDKSIILVSFVRSNKDGPIGEL 573
Score = 96 (38.9 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G VL+ + ++ A
Sbjct: 202 LKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILYTCGFSVLLTSYTHSA 260
Query: 561 VDQLTEKIHRTGLKVVRV 578
VD + K+ + + +R+
Sbjct: 261 VDNILLKLAKFKIGFLRL 278
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 251 (93.4 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 94/330 (28%), Positives = 158/330 (47%)
Query: 627 KRYRMLKKNAEKS---LLDNADVICCTCVGAGDPRL----LKIKFHSILIDESMQATEPE 679
+ + +L+ ++S L+ A +I TC A R L ++ +IL++ES Q E E
Sbjct: 1028 RAFELLRTGLDRSKYLLVKEAKIIAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIE 1087
Query: 680 CMVPVIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPF 730
+P++L G +L I++GDH QL PV+ + + + QSLF RLV LG+
Sbjct: 1088 TFIPLLLQNPLDGLNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTV 1147
Query: 731 RLEVQYRMHPEL-SKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT-QGQ 788
L+ Q R + S + + LQ+ DE K + F V D ++ +G
Sbjct: 1148 DLDGQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGF---VHDYQLINVEDFKGV 1204
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSL 847
E + Y N EA + + G +I ++T Y GQ+ + + + G+
Sbjct: 1205 GESEPNPYFYQNLAEAEYIVAVYMYMRLLGYPAAKISILTTYNGQKHLIRDVINARCGNN 1264
Query: 848 PAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVI 907
P I ++ +VD +QG++ D I++S VR+ + +G L D RRL VA++RA+ G+ V
Sbjct: 1265 PL-IGWPHKITTVDKYQGQQNDYILISLVRT---KAVGHLRDVRRLVVAMSRARLGLYVF 1320
Query: 908 GNPKVLSKQPLWNNLLNFYKEQKVLVEGPL 937
G + L+ N L + K+L + PL
Sbjct: 1321 G------RVSLFKNCLELQQTFKLLTQRPL 1344
Score = 103 (41.3 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 508 SQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLV-KQTGSPVLVCAPSNIAVDQLTE 566
+QV A++ +Q L+L+ GPPGTGKT + I+ + L+ SN A++QL E
Sbjct: 818 TQVEAIRAGMQPGLTLVVGPPGTGKTDVAVQIISNIYHNHPNQRTLIVTHSNQALNQLFE 877
Query: 567 KI 568
KI
Sbjct: 878 KI 879
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 249 (92.7 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 91/303 (30%), Positives = 148/303 (48%)
Query: 627 KRYRMLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPE 679
+ + +L+ ++S L+ A +I TC A R L+++ K+ +IL++E+ Q E E
Sbjct: 1011 RAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIE 1070
Query: 680 CMVPVIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPF 730
+P++L G +L I++GDH QL PV+ + + + QSLF R V LG+
Sbjct: 1071 TFIPLLLQNPEDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTV 1130
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE 790
L+ Q R L N+ Y+ L N +L +F P P F + E+
Sbjct: 1131 DLDAQGRARASLCNL-YNWRYK-QLGN---LPHVQLQP-EFRTPNPGFTFDFQLIN-VED 1183
Query: 791 IAGSGTS------YVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ 844
G G S Y N EA + G E+I ++T Y GQ+ L++ + +Q
Sbjct: 1184 FNGVGESEPNPYFYQNLAEAEYSVALYMYMRLLGYPAERISILTTYNGQK-HLIRDVIHQ 1242
Query: 845 GSLPAKIY-QEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYG 903
+ Q +V +VD FQG++ D II+S VR+ + +G L D RRL VA++RA+ G
Sbjct: 1243 RCASNSFFGQPSKVTTVDRFQGQQNDYIILSLVRT---KAVGHLRDVRRLVVAMSRARLG 1299
Query: 904 IIV 906
+ +
Sbjct: 1300 LYI 1302
Score = 101 (40.6 bits), Expect = 8.3e-22, Sum P(2) = 8.3e-22
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 494 PKHFSAP--NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP- 550
P ++ P N +Q+ A++ +Q L+++ GPPGTGKT + I+ L
Sbjct: 788 PYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTNVAVQIISNLYHNFPEQR 847
Query: 551 VLVCAPSNIAVDQLTEKI 568
L+ SN A++QL EKI
Sbjct: 848 TLIVTHSNQALNQLFEKI 865
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 245 (91.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 65/181 (35%), Positives = 101/181 (55%)
Query: 772 PWPV----PDKPMLFYVTQ---GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
PW + P+ P+ F T E++ G S N TEA + +T+ FI+ G KP I
Sbjct: 848 PWMIGAFEPNNPVCFLNTDKVPAPEQVEKGGVS--NITEAKLIVFLTSVFIKAGCKPSDI 905
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+I PY Q+ ++ + + S+ + +EV +VD +QGR+K +I++S VRSN I
Sbjct: 906 GIIAPYR-QQLKIINDLLFHSSI-----RMVEVNTVDKYQGRDKSIILVSFVRSNKDGPI 959
Query: 885 G-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
G L D RRLNVA+TRAK+ +I++G L++ P LL+ +K +++ P ES
Sbjct: 960 GELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLNSEKKIMDLPSEE-HES 1018
Query: 944 L 944
L
Sbjct: 1019 L 1019
Score = 215 (80.7 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 73/267 (27%), Positives = 127/267 (47%)
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+ L ++ ++ TC+G P + F ++DE+ Q ++P C+ P+ +++ +LVGDH
Sbjct: 698 EELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFF-SQRFVLVGDH 756
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQ- 756
QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++ + Y+G L+
Sbjct: 757 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLEC 816
Query: 757 ------NGVC----ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV---NRTE 803
N V + KL +++F + P + + + T V + E
Sbjct: 817 GSDKVANAVVNLPNLKDVKL-ELEFYADYSENPWMIGAFEPNNPVCFLNTDKVPAPEQVE 875
Query: 804 ASNVEKITTRFIRCGMKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPA-KIYQEIEVASV 860
V IT + + I P + G A Q ++ L + +EV +V
Sbjct: 876 KGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVNTV 935
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFL 887
D +QGR+K +I++S VRSN IG L
Sbjct: 936 DKYQGRDKSIILVSFVRSNKDGPIGEL 962
Score = 96 (38.9 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G VL+ + ++ A
Sbjct: 591 LKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILYTCGFSVLLTSYTHSA 649
Query: 561 VDQLTEKIHRTGLKVVRV 578
VD + K+ + + +R+
Sbjct: 650 VDNILLKLAKFKIGFLRL 667
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 249 (92.7 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 66/181 (36%), Positives = 101/181 (55%)
Query: 772 PWPV----PDKPMLFYVTQ---GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
PW + P+ P+ F T E++ G S N EA V +T+ FI+ G KP I
Sbjct: 880 PWLIAAFEPNNPVCFLNTHKVPAPEQVEKGGVS--NIMEAKLVVFLTSVFIKAGCKPSDI 937
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+I PY Q+ ++ + Q S+ +EV +VD +QGR+K ++++S VRSN+ +
Sbjct: 938 GIIAPYR-QQLKVISDLLAQSSVGM-----VEVNTVDRYQGRDKSIVVVSFVRSNEDGTL 991
Query: 885 G-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
G L D RRLNVA+TRAK+ +I++G LS+ P LLN +K++++ P ES
Sbjct: 992 GELLKDWRRLNVAITRAKHKLILLGCVPSLSRYPPLRKLLNHLNSEKLIIDLPSGE-HES 1050
Query: 944 L 944
L
Sbjct: 1051 L 1051
Score = 226 (84.6 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 78/279 (27%), Positives = 139/279 (49%)
Query: 628 RYRMLKKNAEKSLLDNAD-VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
R + +K A L N+ ++ TC+G P + F ++DE+ Q ++P C+ P+
Sbjct: 719 RSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFF 778
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
+++ +LVGDH QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++
Sbjct: 779 -SRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLS 837
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQGQEE--IAG----SGTSYV 799
+ YEG L+ G +D+ + I+ P K L FY + IA + ++
Sbjct: 838 NKLTYEGKLECG--SDKVANAVINLPNFKDVKLELEFYADYSENPWLIAAFEPNNPVCFL 895
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVIT---------PYE-GQRAFLVQHMQYQGSLPA 849
N + E++ + M+ + + +T P + G A Q ++ L A
Sbjct: 896 NTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLA 955
Query: 850 KI-YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+ +EV +VD +QGR+K ++++S VRSN+ +G L
Sbjct: 956 QSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNEDGTLGEL 994
Score = 98 (39.6 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
H K A L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G
Sbjct: 613 HEAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILYACGFS 671
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
VL+ + ++ AVD + K+ + + +R+
Sbjct: 672 VLLTSYTHSAVDNILLKLAKFKIGFLRL 699
Score = 40 (19.1 bits), Expect = 3.5e-21, Sum P(3) = 3.5e-21
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 428 ELKSSAGAPTEATTGFSVDFIWK--STSFDRMQLAL 461
E+K + + ++ DF+ K ST F +MQL+L
Sbjct: 206 EIKQEVEEYLPSFSKWAGDFMHKHTSTDFPQMQLSL 241
>UNIPROTKB|F1PA16 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0000398 OMA:RTKAVGH GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467
EMBL:AAEX03016041 Ensembl:ENSCAFT00000013319 Uniprot:F1PA16
Length = 1483
Score = 238 (88.8 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 88/297 (29%), Positives = 145/297 (48%)
Query: 631 MLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPECMVP 683
+L+ ++S L+ A +I TC A R L+K+ K+ +IL++E+ Q E E +P
Sbjct: 1015 LLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIP 1074
Query: 684 VIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPFRLEV 734
++L G +L I++GDH QL PV+ + + + QSLF R V +G+ L+
Sbjct: 1075 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1134
Query: 735 QYRMHPELSKFPSNFFYE--GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT--QGQEE 790
Q R L N+ Y+ G+L + E + + L V QG E
Sbjct: 1135 QGRARASLCNL-YNWRYKNLGNLPHVQLLPEFSTANAGLLYDF----QLINVEDFQGVGE 1189
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPA 849
+ Y N EA V + G ++I ++T Y GQ+ + + + GS P
Sbjct: 1190 SEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPL 1249
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
I + +V +VD FQG++ D I++S VR+ + +G L D RRL VA++RA+ G+ +
Sbjct: 1250 -IGRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1302
Score = 116 (45.9 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 494 PKHFSAP--NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPV 551
P ++ P N +Q+ A++ +Q L+++ GPPGTGKT + I+ +
Sbjct: 789 PYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHFPEQRT 848
Query: 552 LVCAPSNIAVDQLTEKI 568
L+ PSN A++QL EKI
Sbjct: 849 LIVTPSNPALNQLFEKI 865
Score = 38 (18.4 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 28/124 (22%), Positives = 53/124 (42%)
Query: 285 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLV 344
+ P +K ++ +D ++ E ++ + V+ + K + FS + Y + N + P V
Sbjct: 31 WAPHIKKKSPFDIKVIEDIYEKEI-VKSRFAIRKIMLLEFSQYL---ENYLWMN-YSPEV 85
Query: 345 KLEADYDKR--LKESQTQENVTVRWDVGLNK--------KSIAYFSLAKTDGDMRLMQGD 394
+A + + +ENV W+ K K I +LA+TDG+ L +
Sbjct: 86 SSKAYLMSICCMVNEKFRENVPA-WETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQT 144
Query: 395 ELKL 398
L L
Sbjct: 145 VLLL 148
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 249 (92.7 bits), Expect = 4.7e-21, Sum P(3) = 4.7e-21
Identities = 66/181 (36%), Positives = 101/181 (55%)
Query: 772 PWPV----PDKPMLFYVTQ---GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
PW + P+ P+ F T E++ G S N EA V +T+ FI+ G KP I
Sbjct: 956 PWLIAAFEPNNPVCFLNTHKVPAPEQVEKGGVS--NIMEAKLVVFLTSVFIKAGCKPSDI 1013
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+I PY Q+ ++ + Q S+ +EV +VD +QGR+K ++++S VRSN+ +
Sbjct: 1014 GIIAPYR-QQLKVISDLLAQSSVGM-----VEVNTVDRYQGRDKSIVVVSFVRSNEDGTL 1067
Query: 885 G-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLKES 943
G L D RRLNVA+TRAK+ +I++G LS+ P LLN +K++++ P ES
Sbjct: 1068 GELLKDWRRLNVAITRAKHKLILLGCVPSLSRYPPLRKLLNHLNSEKLIIDLPSGE-HES 1126
Query: 944 L 944
L
Sbjct: 1127 L 1127
Score = 226 (84.6 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 78/279 (27%), Positives = 139/279 (49%)
Query: 628 RYRMLKKNAEKSLLDNAD-VICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
R + +K A L N+ ++ TC+G P + F ++DE+ Q ++P C+ P+
Sbjct: 795 RSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFF 854
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
+++ +LVGDH QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++
Sbjct: 855 -SRRFVLVGDHQQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLS 913
Query: 747 SNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPML-FYVTQGQEE--IAG----SGTSYV 799
+ YEG L+ G +D+ + I+ P K L FY + IA + ++
Sbjct: 914 NKLTYEGKLECG--SDKVANAVINLPNFKDVKLELEFYADYSENPWLIAAFEPNNPVCFL 971
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVIT---------PYE-GQRAFLVQHMQYQGSLPA 849
N + E++ + M+ + + +T P + G A Q ++ L A
Sbjct: 972 NTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLA 1031
Query: 850 KI-YQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+ +EV +VD +QGR+K ++++S VRSN+ +G L
Sbjct: 1032 QSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNEDGTLGEL 1070
Score = 98 (39.6 bits), Expect = 4.7e-21, Sum P(3) = 4.7e-21
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
H K A L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G
Sbjct: 689 HEAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILYACGFS 747
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
VL+ + ++ AVD + K+ + + +R+
Sbjct: 748 VLLTSYTHSAVDNILLKLAKFKIGFLRL 775
Score = 40 (19.1 bits), Expect = 4.7e-21, Sum P(3) = 4.7e-21
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 428 ELKSSAGAPTEATTGFSVDFIWK--STSFDRMQLAL 461
E+K + + ++ DF+ K ST F +MQL+L
Sbjct: 282 EIKQEVEEYLPSFSKWAGDFMHKHTSTDFPQMQLSL 317
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 239 (89.2 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 88/312 (28%), Positives = 153/312 (49%)
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAG-DPRLLKIKFHSILIDESMQATEPECMV 682
+D ++ R K EK ++NA VI T D + + F +++DE A P+ +
Sbjct: 294 SDLRKQRAKIKEVEKEYIENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIAL 353
Query: 683 PVILGAKQLILVGDHCQLGPVVMCK-KAARAGLSQSLFERL-VVLGIR-----P--FRLE 733
LG K++++ GD QL P+ M + R L + +F +V + P F L+
Sbjct: 354 AASLG-KRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFMLQ 412
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERK-LSKIDFPWPVPDKPMLFYVTQ-GQEEI 791
Q RMH ++SKF ++F Y+ + + ERK L+++ P+ + +LF +Q G +
Sbjct: 413 EQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQ-PF-ANEASVLFDTSQMGAFSL 470
Query: 792 --AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
A SG+ + + ++ + + G+ + IG++TPY Q FL ++ L
Sbjct: 471 KDAASGSRFNIMSGLVAMQMMLIGLLD-GV--QSIGIVTPYRAQSRFLSTCIREM--LQR 525
Query: 850 KIYQEIEV--ASVDAFQGREKDLIIMSCVRS--NDHQGIGFLN--DPRRLNVALTRAKYG 903
YQ I V A+V FQG E+D++I V S + G+ F + + R +NVA+TRA+
Sbjct: 526 TKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGK 585
Query: 904 IIVIGNPKVLSK 915
I + + + K
Sbjct: 586 FIQLSDCHYMCK 597
Score = 94 (38.1 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 27/75 (36%), Positives = 34/75 (45%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
PKH P Y A P + + GPPGTGK+ + I+ Q G VLV
Sbjct: 145 PKHIEKMKNP--KNELAY---RAFYNPTTYVWGPPGTGKSYNLSRII-SAHYQKGKSVLV 198
Query: 554 CAPSNIAVDQLTEKI 568
A SN AVD L ++
Sbjct: 199 LAHSNAAVDVLMSEV 213
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 239 (89.2 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 88/312 (28%), Positives = 153/312 (49%)
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAG-DPRLLKIKFHSILIDESMQATEPECMV 682
+D ++ R K EK ++NA VI T D + + F +++DE A P+ +
Sbjct: 294 SDLRKQRAKIKEVEKEYIENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIAL 353
Query: 683 PVILGAKQLILVGDHCQLGPVVMCK-KAARAGLSQSLFERL-VVLGIR-----P--FRLE 733
LG K++++ GD QL P+ M + R L + +F +V + P F L+
Sbjct: 354 AASLG-KRIVVCGDFLQLPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPNLFMLQ 412
Query: 734 VQYRMHPELSKFPSNFFYEGSLQNGVCADERK-LSKIDFPWPVPDKPMLFYVTQ-GQEEI 791
Q RMH ++SKF ++F Y+ + + ERK L+++ P+ + +LF +Q G +
Sbjct: 413 EQRRMHADISKFTNSFIYKNRVYDHPSVSERKELAQLQ-PF-ANEASVLFDTSQMGAFSL 470
Query: 792 --AGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPA 849
A SG+ + + ++ + + G+ + IG++TPY Q FL ++ L
Sbjct: 471 KDAASGSRFNIMSGLVAMQMMLIGLLD-GV--QSIGIVTPYRAQSRFLSTCIREM--LQR 525
Query: 850 KIYQEIEV--ASVDAFQGREKDLIIMSCVRS--NDHQGIGFLN--DPRRLNVALTRAKYG 903
YQ I V A+V FQG E+D++I V S + G+ F + + R +NVA+TRA+
Sbjct: 526 TKYQNIPVLAATVHKFQGSERDMMIFDTVDSYPQERPGVLFFDHKNHRLVNVAVTRARGK 585
Query: 904 IIVIGNPKVLSK 915
I + + + K
Sbjct: 586 FIQLSDCHYMCK 597
Score = 94 (38.1 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 27/75 (36%), Positives = 34/75 (45%)
Query: 494 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
PKH P Y A P + + GPPGTGK+ + I+ Q G VLV
Sbjct: 145 PKHIEKMKNP--KNELAY---RAFYNPTTYVWGPPGTGKSYNLSRII-SAHYQKGKSVLV 198
Query: 554 CAPSNIAVDQLTEKI 568
A SN AVD L ++
Sbjct: 199 LAHSNAAVDVLMSEV 213
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 241 (89.9 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 61/169 (36%), Positives = 96/169 (56%)
Query: 772 PWPV----PDKPMLFYVTQ---GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQI 824
PW + P+ P+ F T E++ G S N TEA + +T+ FI+ G KP I
Sbjct: 879 PWMIGAFEPNNPVCFLNTDKVPAPEQVEKGGVS--NITEAKLIVFLTSVFIKAGCKPSDI 936
Query: 825 GVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGI 884
G+I PY Q+ ++ + + S+ + +EV +VD +QGR+K +I++S VRSN I
Sbjct: 937 GIIAPYR-QQLKIINDLLFHSSI-----RMVEVNTVDKYQGRDKSIILVSFVRSNKDGPI 990
Query: 885 G-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVL 932
G L D RRLNVA+TRAK+ +I++G L++ P LL+ +K++
Sbjct: 991 GELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLNSEKLI 1039
Score = 215 (80.7 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 73/267 (27%), Positives = 127/267 (47%)
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+ L ++ ++ TC+G P + F ++DE+ Q ++P C+ P+ +++ +LVGDH
Sbjct: 729 EELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFF-SQRFVLVGDH 787
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQ- 756
QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++ + Y+G L+
Sbjct: 788 QQLPPLVLNREARALGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKLEC 847
Query: 757 ------NGVC----ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV---NRTE 803
N V + KL +++F + P + + + T V + E
Sbjct: 848 GSDKVANAVVNLPNLKDVKL-ELEFYADYSENPWMIGAFEPNNPVCFLNTDKVPAPEQVE 906
Query: 804 ASNVEKITTRFIRCGMKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPA-KIYQEIEVASV 860
V IT + + I P + G A Q ++ L + +EV +V
Sbjct: 907 KGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVNTV 966
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFL 887
D +QGR+K +I++S VRSN IG L
Sbjct: 967 DKYQGRDKSIILVSFVRSNKDGPIGEL 993
Score = 96 (38.9 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G VL+ + ++ A
Sbjct: 622 LKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILYTCGFSVLLTSYTHSA 680
Query: 561 VDQLTEKIHRTGLKVVRV 578
VD + K+ + + +R+
Sbjct: 681 VDNILLKLAKFKIGFLRL 698
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 243 (90.6 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 66/183 (36%), Positives = 100/183 (54%)
Query: 770 DFPWPV----PDKPMLFYVTQ---GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE 822
D PW PD P+ F T E++ G S N TEA + +T+ FI+ G P
Sbjct: 879 DSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVS--NVTEARLIVFLTSTFIKAGCSPS 936
Query: 823 QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQ 882
IGVI PY Q+ ++ + + S+ +EV +VD +QGR+K LI++S VRSN+
Sbjct: 937 DIGVIAPYR-QQLRIISDLLARSSVGM-----VEVNTVDKYQGRDKSLILVSFVRSNEDG 990
Query: 883 GIG-FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQKVLVEGPLNNLK 941
+G L D RRLNVALTRAK+ +I++G+ L + P L + ++++++ P
Sbjct: 991 TLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFDHLNAEQLILDLPSRE-H 1049
Query: 942 ESL 944
ESL
Sbjct: 1050 ESL 1052
Score = 231 (86.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 76/267 (28%), Positives = 129/267 (48%)
Query: 638 KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDH 697
+ L ++ ++ TC+G P + F ++DE+ Q ++P C+ P+ +++ +LVGDH
Sbjct: 731 EELYNSHPIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFF-SRRFVLVGDH 789
Query: 698 CQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQ- 756
QL P+V+ ++A G+S+SLF+RL +L VQYRM+ ++ + Y G L+
Sbjct: 790 QQLPPLVVNREARALGMSESLFKRLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLEC 849
Query: 757 ------NGVCA----DERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV---NRTE 803
N V A + +LS + D P L V + + T V + E
Sbjct: 850 GSDRVANAVLALPNLKDARLS-LQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVE 908
Query: 804 ASNVEKITTRFIRCGMKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPAKI-YQEIEVASV 860
V +T + + I +P + G A Q ++ L A+ +EV +V
Sbjct: 909 NGGVSNVTEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTV 968
Query: 861 DAFQGREKDLIIMSCVRSNDHQGIGFL 887
D +QGR+K LI++S VRSN+ +G L
Sbjct: 969 DKYQGRDKSLILVSFVRSNEDGTLGEL 995
Score = 95 (38.5 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP 550
H K A L LN+ Q A+K + + +LI G PGTGKT T +V +++ G
Sbjct: 614 HDAKDTVANILKGLNKPQRQAMKRVLLSKDYTLIVGMPGTGKTTTICALV-RILSACGFS 672
Query: 551 VLVCAPSNIAVDQLTEKIHRTGLKVVRV 578
VL+ + ++ AVD + K+ + + +R+
Sbjct: 673 VLLTSYTHSAVDNILLKLAKFKVGFLRL 700
Score = 40 (19.1 bits), Expect = 3.2e-20, Sum P(3) = 3.2e-20
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 731 RLEVQYRMHPELSKF 745
RL +++HP++ KF
Sbjct: 699 RLGQSHKVHPDIQKF 713
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 172 (65.6 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 55/200 (27%), Positives = 93/200 (46%)
Query: 564 LTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSS 623
L +H G K V + A++ A+D+ + L L + M + S +
Sbjct: 672 LVRLLHLLG-KSVLITAQTHSAVDNLIMRL-LPFGLPMMRLGSGSRIHKQLEEISEERLT 729
Query: 624 ADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVP 683
D K L+K L ++ TC+G G P + +F ++DE+ Q +P + P
Sbjct: 730 KDCKTVEELEK-----ALGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQVLQPTVLRP 784
Query: 684 VILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELS 743
+I +K +LVGD QL P+V K+A + G ++LF+RL L +QYRM+ ++
Sbjct: 785 LIHCSK-FVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKATAV-LSLQYRMNKTIT 842
Query: 744 KFPSNFFYEGSLQNGVCADE 763
+ + Y G L+ CA +
Sbjct: 843 RLANELTYGGDLK---CASD 859
Score = 161 (61.7 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 44/127 (34%), Positives = 68/127 (53%)
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEI 855
+ Y N EA V + ++ G + +IGVI PY Q ++ L +K+ ++
Sbjct: 940 SKYTNYCEAGIVMHLLRYLLKSGYEASRIGVIAPYRAQ-------VELFKKLASKLDTDL 992
Query: 856 EVASVDAFQGREKDLIIMSCVRSN-DHQGIG------FLNDPRRLNVALTRAKYGIIVIG 908
E +VD FQGR+K+LII SC ++ D + L D RRL VA+TRAK +I++G
Sbjct: 993 ECNTVDQFQGRDKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLG 1052
Query: 909 NPKVLSK 915
+ K L +
Sbjct: 1053 DIKCLEQ 1059
Score = 112 (44.5 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 499 APNLPDLNRSQVYAVKHAIQRPLSL-IQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
AP L +LN+ Q A A+ L I+G PGTGKT T +V +L+ G VL+ A +
Sbjct: 631 APILLNLNKVQQNAALRALTTSSHLLIKGLPGTGKTQTLVALV-RLLHLLGKSVLITAQT 689
Query: 558 NIAVDQLTEKIHRTGLKVVRVCAKSR 583
+ AVD L ++ GL ++R+ + SR
Sbjct: 690 HSAVDNLIMRLLPFGLPMMRLGSGSR 715
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 220 (82.5 bits), Expect = 4.2e-20, Sum P(4) = 4.2e-20
Identities = 72/231 (31%), Positives = 117/231 (50%)
Query: 687 GAKQLILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKF 745
G K++IL+GDH QL P+V + A+ + QSLF RL+ L I L+ Q R P +S+
Sbjct: 1194 GLKRVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHITLDRQGRSRPSISEL 1253
Query: 746 PSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTS------YV 799
S + Y+G LQ+ E+ K+ P D + + + + G G S Y
Sbjct: 1254 FS-WKYKG-LQDLPLVKEQLQFKLANPGLAYDYQL---INVDESDGYGVGESEPTPYFYQ 1308
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFL--VQHMQYQGSLPAKIYQ--EI 855
N EA + + I G E+I V+T Y GQ+ L V + P K +
Sbjct: 1309 NLGEAEYIVAMFQYLIAIGYPSEKITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYGLPL 1368
Query: 856 EVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
++ ++D +QG++ D+I++S VR+ + G + D RRL VA++RA+ G+ +
Sbjct: 1369 KITTIDKYQGQQNDIILLSLVRTKQY---GHIRDVRRLIVAMSRARLGLYI 1416
Score = 105 (42.0 bits), Expect = 4.2e-20, Sum P(4) = 4.2e-20
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 501 NLPDLNRSQVYAVKHAIQRP-LSLIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSN 558
N + Q+ A+ ++R L+LI GPPGTGKT + I+ + + + L+ SN
Sbjct: 860 NKIEFTSKQIEAISSGMKRDNLTLIVGPPGTGKTDIAVQIISNIYHSSPNERTLIITHSN 919
Query: 559 IAVDQLTEKIHR 570
A++QL EKI+R
Sbjct: 920 QALNQLFEKIYR 931
Score = 67 (28.6 bits), Expect = 4.2e-20, Sum P(4) = 4.2e-20
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 627 KRYRMLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPE 679
K + +LK ++ LL + ++ TC A R LL++ KF ++L++ES Q ++ E
Sbjct: 1098 KVFELLKSPNDRYNYLLLKQSKIVAMTCTHAALKRNELLRLGFKFDNLLMEESAQISDIE 1157
Query: 680 CMVPVIL 686
+P+ L
Sbjct: 1158 SFIPLQL 1164
Score = 41 (19.5 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 626 EKRYRMLKKNAEKSLLDNADVI 647
EK+ R+ KK EK +N++ I
Sbjct: 230 EKKLRLFKKKIEKLSNNNSNSI 251
Score = 37 (18.1 bits), Expect = 4.2e-20, Sum P(4) = 4.2e-20
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 62 KQNLDNSNLNLVS 74
KQ LDN++ N VS
Sbjct: 23 KQKLDNNSNNSVS 35
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 238 (88.8 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 87/298 (29%), Positives = 134/298 (44%)
Query: 630 RMLKKNAEKSLLDNADVICCTCVGAGDPR--LLKIKFH--SILIDESMQATEPECMVPVI 685
R K A L+ A +I T A R + + FH +I+++E+ Q TE E +P
Sbjct: 1022 RQPKDKANYLLVKEARIIAMTSTHAAMRRQEIADLGFHYDNIVMEEAAQITEVESFIPTA 1081
Query: 686 L-----GA---KQLILVGDHCQLGPVVMCKKAAR--AGLSQSLFERLVVLGIRPFRLEVQ 735
L G K+++L GDH Q P++ A R A QSLF RL+ LG+ L+ Q
Sbjct: 1082 LQNMKEGQLPLKRIVLCGDHLQNSPIIQ-NLAFRQYAHFEQSLFLRLIRLGVPAITLDQQ 1140
Query: 736 YRMHPELSK-FPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
R P +++ F + G+L A E K + F + + Y G+ E
Sbjct: 1141 GRARPSIAELFRWRYQNLGNLPIVEQAPEFKQANAGFQFEYQFINVPDYQGTGEREPTPH 1200
Query: 795 GTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQE 854
N EA I G +I ++ Y GQ A + + ++ S
Sbjct: 1201 FVQ--NLGEAEYAVAIFQYMRLLGYPASKISILATYAGQTALIKDVLNHRCSKNTLFGMP 1258
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKV 912
V +VD +QG + D II+S R+ +G+L D RRL VAL+RA+ G+ ++G +V
Sbjct: 1259 KIVTTVDRYQGEQNDYIILSLTRTRT---VGYLRDVRRLTVALSRARLGLYILGRREV 1313
Score = 95 (38.5 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 494 PKHFSAPNLPDLN--RSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP- 550
P AP L + +Q+ A+ Q L++I GPPGTGKT + I+ + +
Sbjct: 795 PYPVDAPRLNAVRFTPAQIQAIASGTQPGLTVIVGPPGTGKTDVATQIINNIYHNFPTER 854
Query: 551 VLVCAPSNIAVDQLTEKI 568
L+ A SN A++QL +KI
Sbjct: 855 TLLVAHSNQALNQLFQKI 872
Score = 49 (22.3 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 26/129 (20%), Positives = 47/129 (36%)
Query: 450 KSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQ 509
+ +F + +++ D ++ +I LG+ LP + + R
Sbjct: 663 RENNFKSILETMQRLIASDITLPQWIQDIFLGYGDPAGACYTELPNRLKSVDF----RDT 718
Query: 510 VYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQLTEKIH 569
+H I+ L P G + V + V+++ P AP DQ E+
Sbjct: 719 FLDWQHLIESFPGLTIEPSGDATSSFQPPYVLEYVEESAQPSTSSAPKKRRRDQHAEE-- 776
Query: 570 RTGLKVVRV 578
R G K +RV
Sbjct: 777 RGGPKSLRV 785
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 143 (55.4 bits), Expect = 5.3e-20, Sum P(4) = 5.3e-20
Identities = 31/80 (38%), Positives = 51/80 (63%)
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLND 889
Y+ RA L+ H Q + + I+++++D +QG E D++I + RSN IGF++
Sbjct: 940 YDLVRAGLISHASAQ-----HVKRPIKLSTIDNYQGEESDIVIATLTRSNKDGDIGFMSA 994
Query: 890 PRRLNVALTRAKYGIIVIGN 909
P+RLNV L+RA+ +I+IGN
Sbjct: 995 PQRLNVLLSRARDVLIMIGN 1014
Score = 139 (54.0 bits), Expect = 5.3e-20, Sum P(4) = 5.3e-20
Identities = 58/227 (25%), Positives = 96/227 (42%)
Query: 626 EKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSI-LIDESMQATEPECMVPV 684
+K M + LL + C T A + +L + L++E+ + E + +
Sbjct: 703 KKLDEMWNERTRDVLLSKRIIGCTTTAAAINASVLNTTSPGVVLLEEAGEILESHVLTAL 762
Query: 685 ILGAKQLILVGDHCQLGPVV-----MCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMH 739
KQLI++GDH QL P + +K + L++SLFERLV G L Q+RM
Sbjct: 763 GSHTKQLIMIGDHQQLRPKINNYALSVEKGSGYDLNRSLFERLVESGYPHSTLAKQHRMA 822
Query: 740 PELSKFPSNFFY----EGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSG 795
PE+S Y +G A +++ F + L V+ + G G
Sbjct: 823 PEISALVRRLTYPDLLDGDKTKTRLAPRGLQNRVVFIDHSQPEGFLHGVSDRDGD-GGKG 881
Query: 796 TSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQ 842
+ N E V KI + G +++ ++TPY GQ L + ++
Sbjct: 882 SKQ-NTFEVKLVLKIVKYLGQQGYGTDKLVILTPYLGQLHLLREELR 927
Score = 121 (47.7 bits), Expect = 5.3e-20, Sum P(4) = 5.3e-20
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
L+ SQ+ ++ + + +SLIQGPPGTGK+ A I L K + +LV +N A+DQ
Sbjct: 462 LDPSQMESLLSGLTQRVSLIQGPPGTGKSFVGALIAKALYKHSKETILVMCYTNHALDQF 521
Query: 565 TEKIHRTGLK---VVRVCAKS 582
E + G+ +VR+ +KS
Sbjct: 522 LEDLMDIGIDESAIVRLGSKS 542
Score = 45 (20.9 bits), Expect = 3.6e-10, Sum P(4) = 3.6e-10
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 892 RLNVALTRAKYGIIVIGNP 910
R NV L ++G +++GNP
Sbjct: 1311 RQNVDLKGERFGSVLLGNP 1329
Score = 37 (18.1 bits), Expect = 5.3e-20, Sum P(4) = 5.3e-20
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 265 DEDPHQVLLRYEDGYQYQNIFGPLVKLE-----ADYDKRLKES-QTQENVTVR--WDVGL 316
D D + L E + FG L++ E A D+++ ++ +V +R D +
Sbjct: 317 DRDARKAFLENEQSFLRHRSFGCLIRGEEIVSFAMVDRQIDYLLKSPPSVVLRVIGDEAV 376
Query: 317 NKKSIAYFSL 326
+K+++YF L
Sbjct: 377 -RKTLSYFKL 385
>RGD|1306223 [details] [associations]
symbol:Aqr "aquarius homolog (mouse)" species:10116 "Rattus
norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901 RGD:1306223
GO:GO:0005681 GO:GO:0000398 GO:GO:0097157 PANTHER:PTHR10887:SF5
IPI:IPI00389267 ProteinModelPortal:D3ZZP0
Ensembl:ENSRNOT00000011917 UCSC:RGD:1306223 ArrayExpress:D3ZZP0
Uniprot:D3ZZP0
Length = 1353
Score = 235 (87.8 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 87/297 (29%), Positives = 145/297 (48%)
Query: 631 MLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPECMVP 683
+L+ ++S L+ A +I TC A R L+K+ K+ +IL++E+ Q E E +P
Sbjct: 1016 LLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIP 1075
Query: 684 VIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPFRLEV 734
++L G +L I++GDH QL PV+ + + + QSLF R V +G+ L+
Sbjct: 1076 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1135
Query: 735 QYRMHPELSKFPSNFFYE--GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT--QGQEE 790
Q R L N+ Y+ G+L + E + + L V QG E
Sbjct: 1136 QGRARASLCNL-YNWRYKNLGNLPHVQLLPEFSTANAGLLYDF----QLINVEDFQGVGE 1190
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPA 849
+ Y N EA V + G ++I ++T Y GQ+ + + + G+ P
Sbjct: 1191 SEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPL 1250
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
I + +V +VD FQG++ D I++S VR+ + +G L D RRL VA++RA+ G+ +
Sbjct: 1251 -IGRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1303
Score = 101 (40.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 494 PKHFSAP--NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP- 550
P ++ P N +Q+ A++ +Q L+++ GPPGTGKT + I+ +
Sbjct: 789 PYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQR 848
Query: 551 VLVCAPSNIAVDQLTEKI 568
L+ SN A++QL EKI
Sbjct: 849 TLIVTHSNQALNQLFEKI 866
Score = 40 (19.1 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 31/125 (24%), Positives = 54/125 (43%)
Query: 285 FGPLVKLEADYD-KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPL 343
+ P +K ++ +D K ++E +E V R+ + K + FS + Y + N + P
Sbjct: 31 WAPHIKKKSPFDIKVIEEIYEKEIVKSRF--AIRKIMLLEFSQYL---ENYLWMN-YSPE 84
Query: 344 VKLEADYDKR--LKESQTQENVTVRWDVGLNK--------KSIAYFSLAKTDGDMRLMQG 393
V +A + + +ENV W+ K K I +LA+TDG+ L +
Sbjct: 85 VSSKAYLMSICCMVNEKFRENVPA-WETFKKKPDHFPFFFKRILKAALAETDGEFSLHEQ 143
Query: 394 DELKL 398
L L
Sbjct: 144 TVLLL 148
>UNIPROTKB|O60306 [details] [associations]
symbol:AQR "Intron-binding protein aquarius" species:9606
"Homo sapiens" [GO:0097157 "pre-mRNA intronic binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0000398 EMBL:AB011132 EMBL:EF553519
EMBL:BC036913 EMBL:BC070379 EMBL:BC108262 EMBL:BC127111
EMBL:BC127112 IPI:IPI00796835 PIR:T00333 RefSeq:NP_055506.1
UniGene:Hs.510958 ProteinModelPortal:O60306 SMR:O60306
IntAct:O60306 STRING:O60306 PhosphoSite:O60306 PaxDb:O60306
PRIDE:O60306 Ensembl:ENST00000156471 GeneID:9716 KEGG:hsa:9716
UCSC:uc001ziv.3 CTD:9716 GeneCards:GC15M035147 HGNC:HGNC:29513
MIM:610548 neXtProt:NX_O60306 PharmGKB:PA134869224 eggNOG:COG1112
HOGENOM:HOG000170551 HOVERGEN:HBG080430 InParanoid:O60306 KO:K12874
OMA:RTKAVGH OrthoDB:EOG4ZPDTF ChiTaRS:AQR GenomeRNAi:9716
NextBio:36525 Bgee:O60306 CleanEx:HS_AQR Genevestigator:O60306
GermOnline:ENSG00000021776 GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 Uniprot:O60306
Length = 1485
Score = 235 (87.8 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 87/297 (29%), Positives = 145/297 (48%)
Query: 631 MLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPECMVP 683
+L+ ++S L+ A +I TC A R L+K+ K+ +IL++E+ Q E E +P
Sbjct: 1016 LLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIP 1075
Query: 684 VIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPFRLEV 734
++L G +L I++GDH QL PV+ + + + QSLF R V +G+ L+
Sbjct: 1076 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1135
Query: 735 QYRMHPELSKFPSNFFYE--GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT--QGQEE 790
Q R L N+ Y+ G+L + E + + L V QG E
Sbjct: 1136 QGRARASLCNL-YNWRYKNLGNLPHVQLLPEFSTANAGLLYDF----QLINVEDFQGVGE 1190
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPA 849
+ Y N EA V + G ++I ++T Y GQ+ + + + G+ P
Sbjct: 1191 SEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPL 1250
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
I + +V +VD FQG++ D I++S VR+ + +G L D RRL VA++RA+ G+ +
Sbjct: 1251 -IGRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1303
Score = 101 (40.6 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 494 PKHFSAP--NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP- 550
P ++ P N +Q+ A++ +Q L+++ GPPGTGKT + I+ +
Sbjct: 789 PYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQR 848
Query: 551 VLVCAPSNIAVDQLTEKI 568
L+ SN A++QL EKI
Sbjct: 849 TLIVTHSNQALNQLFEKI 866
Score = 41 (19.5 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 285 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLV 344
+ P +K ++ +D ++ E ++ + V+ + K + FS + Y + N + P V
Sbjct: 31 WAPHIKKKSPFDIKVIEDIYEKEI-VKSRFAIRKIMLLEFSQYL---ENYLWMN-YSPEV 85
Query: 345 KLEADYDKR--LKESQTQENVTVRWDVGLNK--------KSIAYFSLAKTDGDMRLMQGD 394
+A + + +ENV W++ K K I +LA+TDG+ L +
Sbjct: 86 SSKAYLMSICCMVNEKFRENVPA-WEIFKKKPDHFPFFFKHILKAALAETDGEFSLHEQT 144
Query: 395 ELKL 398
L L
Sbjct: 145 VLLL 148
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 235 (87.8 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 87/301 (28%), Positives = 151/301 (50%)
Query: 627 KRYRMLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPE 679
+ + +L+ ++S L+ A +I TC A R L+++ K+ +IL++ES Q E E
Sbjct: 1021 RAFELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIE 1080
Query: 680 CMVPVIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPF 730
+P++L G +L I++GDH QL PV+ + + + QSLF R V +G+
Sbjct: 1081 TFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTV 1140
Query: 731 RLEVQYRMHPELSKFPSNFFYE--GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQ 788
L+ Q R L N+ Y+ G+L + E + + F + + + G+
Sbjct: 1141 DLDAQGRARASLCNL-YNWRYKNLGNLPHVQLMPEFRTANAGFLYDFQLINVEDFNGVGE 1199
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ--GS 846
E + Y N EA V + G ++I ++T Y GQ+ L++ + Q G+
Sbjct: 1200 SE--PNPYFYQNLGEAEYVVAVFMYMCLLGYPADRISILTTYNGQK-HLIRDVINQRCGN 1256
Query: 847 LPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLN-DPRRLNVALTRAKYGII 905
P I + +V +VD FQG++ D I++S VR+ + +G L D RRL VA++RA+ G+
Sbjct: 1257 NPL-IGRPNKVTTVDRFQGQQNDYILLSLVRT---KAVGHLRRDVRRLVVAMSRARLGLY 1312
Query: 906 V 906
+
Sbjct: 1313 I 1313
Score = 103 (41.3 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 494 PKHFSAP--NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP- 550
P ++ P N +Q+ A++ +Q L+++ GPPGTGKT + I+ L
Sbjct: 798 PYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNLYHNFPEQR 857
Query: 551 VLVCAPSNIAVDQLTEKI 568
L+ SN A++QL EKI
Sbjct: 858 TLIVTHSNQALNQLFEKI 875
Score = 38 (18.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 25 GGDTQGSEFDFTDFTLPSQSQTQASQLDSVNQI 57
G DT E +F L S+ + + SQ+ +NQ+
Sbjct: 401 GNDTS-YEKEFLLELLVSRHERRISQIQQLNQM 432
>MGI|MGI:1276102 [details] [associations]
symbol:Aqr "aquarius" species:10090 "Mus musculus"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 MGI:MGI:1276102 GO:GO:0000398
CTD:9716 eggNOG:COG1112 HOGENOM:HOG000170551 HOVERGEN:HBG080430
KO:K12874 OMA:RTKAVGH OrthoDB:EOG4ZPDTF GO:GO:0071013 GO:GO:0097157
PANTHER:PTHR10887:SF5 EMBL:AK122310 EMBL:AK145547 EMBL:AK151716
EMBL:BC042479 EMBL:U90333 IPI:IPI00330263 RefSeq:NP_033832.2
UniGene:Mm.2545 ProteinModelPortal:Q8CFQ3 SMR:Q8CFQ3
PhosphoSite:Q8CFQ3 PaxDb:Q8CFQ3 PRIDE:Q8CFQ3
Ensembl:ENSMUST00000043160 GeneID:11834 KEGG:mmu:11834
GeneTree:ENSGT00700000104467 InParanoid:Q8CFQ3 NextBio:279759
Bgee:Q8CFQ3 CleanEx:MM_AQR Genevestigator:Q8CFQ3
GermOnline:ENSMUSG00000040383 Uniprot:Q8CFQ3
Length = 1481
Score = 235 (87.8 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 87/297 (29%), Positives = 145/297 (48%)
Query: 631 MLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPECMVP 683
+L+ ++S L+ A +I TC A R L+K+ K+ +IL++E+ Q E E +P
Sbjct: 1020 LLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIP 1079
Query: 684 VIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPFRLEV 734
++L G +L I++GDH QL PV+ + + + QSLF R V +G+ L+
Sbjct: 1080 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1139
Query: 735 QYRMHPELSKFPSNFFYE--GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT--QGQEE 790
Q R L N+ Y+ G+L + E + + L V QG E
Sbjct: 1140 QGRARASLCNL-YNWRYKNLGNLPHVQLLPEFSTANAGLLYDF----QLINVEDFQGVGE 1194
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPA 849
+ Y N EA V + G ++I ++T Y GQ+ + + + G+ P
Sbjct: 1195 SEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGNNPL 1254
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
I + +V +VD FQG++ D I++S VR+ + +G L D RRL VA++RA+ G+ +
Sbjct: 1255 -IGRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1307
Score = 101 (40.6 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 494 PKHFSAP--NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP- 550
P ++ P N +Q+ A++ +Q L+++ GPPGTGKT + I+ +
Sbjct: 789 PYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQR 848
Query: 551 VLVCAPSNIAVDQLTEKI 568
L+ SN A++QL EKI
Sbjct: 849 TLIVTHSNQALNQLFEKI 866
Score = 39 (18.8 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 29/117 (24%), Positives = 51/117 (43%)
Query: 285 FGPLVKLEADYD-KRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPL 343
+ P +K ++ +D K ++E +E V R+ + K + FS + Y + N + P
Sbjct: 31 WAPHIKKKSPFDIKVIEEIYEKEIVKSRF--AIRKIMLLEFSQYL---ENYLWMN-YSPE 84
Query: 344 VKLEADYDKR--LKESQTQENVTVRWDVGLNK--------KSIAYFSLAKTDGDMRL 390
V +A + + +ENV W+ K K I +LA+TDG+ L
Sbjct: 85 VSSKAYLMSICCMVNEKFRENVPA-WETFKKKPDHFPFFFKCILKAALAETDGEFSL 140
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 235 (87.8 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 88/297 (29%), Positives = 145/297 (48%)
Query: 631 MLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPECMVP 683
+L+ ++S L+ A +I TC A R L+K+ K+ +IL++E+ Q E E +P
Sbjct: 998 LLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIP 1057
Query: 684 VIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPFRLEV 734
++L G +L I++GDH QL PV+ + + + QSLF R V +G+ L+
Sbjct: 1058 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1117
Query: 735 QYRMHPELSKFPSNFFYE--GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT--QGQEE 790
Q R L N+ Y+ G+L + E + + L V QG E
Sbjct: 1118 QGRARASLCNL-YNWRYKNLGNLPHVQLLLEFSTANAGLLYDF----QLINVEDFQGVGE 1172
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPA 849
+ Y N EA V + G ++I ++T Y GQ+ + + + GS P
Sbjct: 1173 SEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPL 1232
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRRLNVALTRAKYGIIV 906
I + +V +VD FQG++ D I++S VR+ + +G L D RRL VA++RA+ G+ +
Sbjct: 1233 -IGRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRDVRRLVVAMSRARLGLYI 1285
Score = 101 (40.6 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 494 PKHFSAP--NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP- 550
P ++ P N +Q+ A++ +Q L+++ GPPGTGKT + I+ +
Sbjct: 772 PYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQR 831
Query: 551 VLVCAPSNIAVDQLTEKI 568
L+ SN A++QL EKI
Sbjct: 832 TLIVTHSNQALNQLFEKI 849
Score = 39 (18.8 bits), Expect = 6.9e-13, Sum P(3) = 6.9e-13
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 644 ADVICCTCV 652
+D+ICCT +
Sbjct: 380 SDIICCTTI 388
Score = 38 (18.4 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 28/124 (22%), Positives = 53/124 (42%)
Query: 285 FGPLVKLEADYDKRLKESQTQENVTVRWDVGLNKKSIAYFSLAKTDGDGYQYQNIFGPLV 344
+ P +K ++ +D ++ E ++ + V+ + K + FS + Y + N + P V
Sbjct: 31 WAPHIKKKSPFDIKVIEDIYEKEI-VKSRFAIRKIMLLEFSQYL---ENYLWMN-YSPEV 85
Query: 345 KLEADYDKR--LKESQTQENVTVRWDVGLNK--------KSIAYFSLAKTDGDMRLMQGD 394
+A + + +ENV W+ K K I +LA+TDG+ L +
Sbjct: 86 SSKAYLMSICCMVNEKFRENVPA-WETFKKKPDHFPFFFKCILKAALAETDGEFSLHEQT 144
Query: 395 ELKL 398
L L
Sbjct: 145 VLLL 148
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 233 (87.1 bits), Expect = 4.0e-19, Sum P(3) = 4.0e-19
Identities = 73/273 (26%), Positives = 133/273 (48%)
Query: 628 RYRMLKKNAE-KSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVIL 686
R + +K + + L ++ V+ C+G P ++ +F ++DE+ Q ++P C+ P+
Sbjct: 737 RSKSIKSVTDLEELYNSQPVVATACMGINHPIFVQKQFDFCIVDEASQISQPICLGPLFC 796
Query: 687 GAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFP 746
+K+ +LVGDH QL P+V +A G+S+SLF+RL +L VQYRM+ ++
Sbjct: 797 -SKRFVLVGDHQQLPPLVQNSEARDLGMSESLFKRLEQNQNAVVQLTVQYRMNSKIMSLS 855
Query: 747 SNFFYEGSLQNG------VCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYV- 799
+ YEG L+ G A+ L + + K L V + + + T V
Sbjct: 856 NKLVYEGKLECGSEKVSNATANLPNLKMLKLEFADASKTWLKEVLEPDKPVCFLNTEKVP 915
Query: 800 --NRTEASNVEKITTRFIRCGMKPEQIGV-ITPYEGQRAFLVQH-MQYQGSLPAKIYQE- 854
TE V +T + + I P + +H ++ L A++ +
Sbjct: 916 APEHTEKGGVCNVTEAKLVFFLTTLFIKAGCRPSDIGIISPYRHQLKVITDLMARLKENR 975
Query: 855 IEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
+EV ++D +QGR+K +II+S VR+++ + +G L
Sbjct: 976 VEVNTIDKYQGRDKSIIIVSFVRNSNDENLGAL 1008
Score = 95 (38.5 bits), Expect = 4.0e-19, Sum P(3) = 4.0e-19
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 505 LNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN+ Q A+K + R +LI G PGTGKT T +V +++ G VL+ + ++ AVD
Sbjct: 644 LNKPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALV-RILSACGFSVLLTSFTHTAVDN 702
Query: 564 LTEKIHRTGLKVVRV 578
+ K+ + + +R+
Sbjct: 703 ILLKLAKFKVGFLRL 717
Score = 39 (18.8 bits), Expect = 4.0e-19, Sum P(3) = 4.0e-19
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 97 LPP-----HACKYCG-IHD 109
LPP ACKYC IH+
Sbjct: 400 LPPLIDDSQACKYCSQIHN 418
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 212 (79.7 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 82/283 (28%), Positives = 130/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L K +++L GDH QL P V + A L SL +R
Sbjct: 781 FTHILLDEAAQAMECETIMPLALAVKSTRVVLAGDHMQLSPFVYSEFARERNLHVSLLDR 840
Query: 722 LV--VLGIRPFRLEV--QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L P R+ + YR H + + S+ FYEG L A ++ DF
Sbjct: 841 LYEHYPSEYPCRILLCENYRSHEAIINYTSDLFYEGKLM----ASGKQPPHKDF------ 890
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T+Y N E VE++ ++ + G E IGV++PY
Sbjct: 891 YPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVSWGKLEEGSIGVVSPYA 950
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K E+ V V QG++ ++ +S VR
Sbjct: 951 DQ-VFRIR-----AELRKKRMSEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKR 1004
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1005 KEQLVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1047
Score = 110 (43.8 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 33/74 (44%), Positives = 40/74 (54%)
Query: 503 PDLNRSQVYAVKHAIQRPLS------LIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
P LN Q A+ AI PLS LI GP GTGKT T A V ++KQ S VL+C
Sbjct: 633 PRLNAKQKEAIL-AITTPLSINLPPVLIIGPYGTGKTFTLAQAVKHILKQPESRVLICTH 691
Query: 557 SNIAVD-QLTEKIH 569
SN A D + + +H
Sbjct: 692 SNSAADLYIKDYLH 705
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 261 (96.9 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 70/211 (33%), Positives = 112/211 (53%)
Query: 736 YRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
YR HP + P+ +YEG LQ D + + + P P++F+ G++E G+
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWE-GLPRQGFPIIFHGVMGKDEREGN 790
Query: 795 GTSYVNRTEASNV----EKITTRFIRCG---MKPEQIGVITPYEGQRAFLVQHM--QYQG 845
S+ N EA+ V +++ T + G + P +GVI+PY Q ++H +
Sbjct: 791 SPSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQ-VEKIRHCITKLDK 849
Query: 846 SLPA-KIYQEIEVASVDAFQGREKDLIIMSCVRSNDH--Q-----GIGFLNDPRRLNVAL 897
L ++++V SV+ FQG+E+ +I++S VRS+ Q +GFL +P+R NVA+
Sbjct: 850 ELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAV 909
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
TRAK +IV+GNP +L P W L F KE
Sbjct: 910 TRAKALLIVVGNPLLLGHDPDWKAFLEFCKE 940
Score = 242 (90.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 103/346 (29%), Positives = 147/346 (42%)
Query: 506 NRSQVYAVKHAIQ---RPLS-LIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIA 560
N Q+ A+KH + RP +I GPPGTGKTVT + Q+VK +L CAPSN
Sbjct: 500 NPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 559
Query: 561 VDQLTEKIHRTGL--KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXX 618
D L +++ R L + R+ A SR+ P N
Sbjct: 560 ADLLCQRL-RVHLPSSIYRLLAPSRDIRLVPEDIKPCCNW-------------------- 598
Query: 619 XXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
+ + + KK E +L + V A P F I IDE+ + EP
Sbjct: 599 --DAQKGDYVFPAKKKLQEYRVLITTLITASRLVSAQFPI---DHFTHIFIDEAGHSMEP 653
Query: 679 ECMVPV--ILGAK-------QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL---- 725
E +V + +L K QL+L GD QLGPV+ C + GL SL ERL+
Sbjct: 654 ESLVAIAGLLEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTYNALY 713
Query: 726 -----GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VP 776
G P F +L YR HP + P+ +YEG LQ CAD + W +P
Sbjct: 714 KKGPDGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQ--ACADVVDRERF-CRWEGLP 770
Query: 777 DK--PMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMK 820
+ P++F+ G++E G+ S+ N EA+ V + + K
Sbjct: 771 RQGFPIIFHGVMGKDEREGNSPSFFNPEEAATVTSYLKQLLTSSSK 816
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 261 (96.9 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 69/214 (32%), Positives = 113/214 (52%)
Query: 736 YRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
YR HP + P+ +Y+G LQ D + + + P D P++F+ G++E G+
Sbjct: 732 YRSHPTILDVPNRLYYDGELQACADVVDRERFCRWE-GLPRQDFPIIFHGVMGKDEREGN 790
Query: 795 GTSYVNRTEASNVEKITTRFI-------RCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GS 846
S+ N EA+ V + + + + P +GVI+PY Q V+ ++Y
Sbjct: 791 SPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRSVGVISPYRKQ----VEKIRYCITK 846
Query: 847 LPAKI-----YQEIEVASVDAFQGREKDLIIMSCVRSNDH--Q-----GIGFLNDPRRLN 894
L ++ ++++V SV+ FQG+E+ +I++S VRS+ Q +GFL +P+R N
Sbjct: 847 LDKQLRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFN 906
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
VA+TRAK +IV+GNP +L P W L F KE
Sbjct: 907 VAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKE 940
Score = 247 (92.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 105/338 (31%), Positives = 149/338 (44%)
Query: 506 NRSQVYAVKHAIQ---RPLS-LIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIA 560
N Q+ A+KH + RP +I GPPGTGKTVT + Q+VK +L CAPSN
Sbjct: 500 NPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 559
Query: 561 VDQLTEKIHRTGL--KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXX 618
D L +++ R L + R+ A SR+ P N
Sbjct: 560 ADLLCQRL-RVHLPSSIYRLLAPSRDIHLVPEDIKPCCNW-------------------- 598
Query: 619 XXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF---H--SILIDESM 673
D K+ + + +K L V+ T + A RL+ +F H I IDE+
Sbjct: 599 ------DAKKGDFVFPSKKK--LQEYRVLITTLITAS--RLVSAQFPIDHFTHIFIDEAG 648
Query: 674 QATEPECMVPV--ILGAK-------QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
A EPE +V + ++ K QL+L GD QLGPV+ C + GL SL ERL+
Sbjct: 649 HAMEPESLVAIAGLMEVKEADNPGGQLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLT 708
Query: 725 L---------GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
G P F +L YR HP + P+ +Y+G LQ CAD +
Sbjct: 709 FNALYKKGPDGYNPQFITKLLRNYRSHPTILDVPNRLYYDGELQ--ACADVVDRERF-CR 765
Query: 773 W---PVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
W P D P++F+ G++E G+ S+ N EA+ V
Sbjct: 766 WEGLPRQDFPIIFHGVMGKDEREGNSPSFFNPEEAATV 803
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 259 (96.2 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 736 YRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
YR HP + P+ +Y+G LQ D + + + P P++F+ G++E G+
Sbjct: 733 YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWE-GLPQQGFPIIFHGVMGKDEREGN 791
Query: 795 GTSYVNRTEASNVEKITTRFI-------RCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GS 846
S+ N EA+ V + + + + P +GVI+PY Q V+ ++Y
Sbjct: 792 SPSFFNPEEAATVTSYLKQLLAPSSKKGKARLSPRNVGVISPYRKQ----VEKIRYCITK 847
Query: 847 LPAKI-----YQEIEVASVDAFQGREKDLIIMSCVRSNDH--Q-----GIGFLNDPRRLN 894
L ++ ++++V SV+ FQG+E+ +I++S VRS+ Q +GFL +P+R N
Sbjct: 848 LDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFN 907
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
VA+TRAK +IV+GNP +L P W L F KE
Sbjct: 908 VAVTRAKALLIVVGNPLLLGHDPDWKTFLEFCKE 941
Score = 232 (86.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 104/338 (30%), Positives = 150/338 (44%)
Query: 506 NRSQVYAVKHAIQ---RPLS-LIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIA 560
N Q+ A+KH ++ RP +I GPPGTGKTVT + Q+VK +L CAPSN
Sbjct: 501 NPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 560
Query: 561 VDQLTEKIHRTGL--KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXX 618
D L +++ R L + R+ A SR+ P N
Sbjct: 561 ADLLCQRL-RVHLPSSIYRLLAPSRDIRMVPEDIKTCCNW-------------------- 599
Query: 619 XXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF---H--SILIDESM 673
D K+ + A+K L V+ T + A RL+ +F H I IDE+
Sbjct: 600 ------DAKKGEYVYP-AKKHL-QQYRVLITTLITAS--RLVSAQFPIDHFTHIFIDEAG 649
Query: 674 QATEPECMVPV--ILGAK-------QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
EPE +V + ++ K QL+L GD QLGPV+ A + GL SL ERL+
Sbjct: 650 HCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALKHGLGYSLLERLLA 709
Query: 725 L---------GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
G P F +L YR HP + P+ +Y+G LQ CAD +
Sbjct: 710 YNSLYKKGPNGYDPQFITKLLRNYRSHPTILDIPNQLYYDGELQ--ACADVVDRERF-CR 766
Query: 773 WP-VPDK--PMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
W +P + P++F+ G++E G+ S+ N EA+ V
Sbjct: 767 WEGLPQQGFPIIFHGVMGKDEREGNSPSFFNPEEAATV 804
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 259 (96.2 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 736 YRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
YR HP + P+ +Y+G LQ D + + + P P++F+ G++E G+
Sbjct: 733 YRSHPTILDIPNQLYYDGELQACADVVDRERFCRWE-GLPQQGFPIIFHGVMGKDEREGN 791
Query: 795 GTSYVNRTEASNVEKITTRFI-------RCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GS 846
S+ N EA+ V + + + + P +GVI+PY Q V+ ++Y
Sbjct: 792 SPSFFNPEEAATVTSYLRQLLAPSSKKGKARLSPRSVGVISPYRKQ----VEKIRYCITK 847
Query: 847 LPAKI-----YQEIEVASVDAFQGREKDLIIMSCVRSNDH--Q-----GIGFLNDPRRLN 894
L ++ ++++V SV+ FQG+E+ +I++S VRS+ Q +GFL +P+R N
Sbjct: 848 LDRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFN 907
Query: 895 VALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
VA+TRAK +IV+GNP +L P W L F KE
Sbjct: 908 VAVTRAKALLIVVGNPLLLGHDPDWKTFLEFCKE 941
Score = 228 (85.3 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 103/338 (30%), Positives = 149/338 (44%)
Query: 506 NRSQVYAVKHAIQ---RPLS-LIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIA 560
N Q+ A+KH ++ RP +I GPPGTGKTVT + Q+VK +L C PSN
Sbjct: 501 NPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACTPSNSG 560
Query: 561 VDQLTEKIHRTGL--KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXX 618
D L +++ R L + R+ A SR+ P N
Sbjct: 561 ADLLCQRL-RVHLPSSIYRLLAPSRDIRMVPEDIKTCCNW-------------------- 599
Query: 619 XXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF---H--SILIDESM 673
D K+ + A+K L V+ T + A RL+ +F H I IDE+
Sbjct: 600 ------DPKKGEYVYP-AKKHL-QQYRVLITTLITAS--RLVSAQFPIDHFTHIFIDEAG 649
Query: 674 QATEPECMVPV--ILGAK-------QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
EPE +V + ++ K QL+L GD QLGPV+ A + GL SL ERL+
Sbjct: 650 HCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLAQKHGLGYSLLERLLT 709
Query: 725 L---------GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
G P F +L YR HP + P+ +Y+G LQ CAD +
Sbjct: 710 YNSLYKKGPNGYDPQFITKLLRNYRSHPTILDIPNQLYYDGELQ--ACADVVDRERF-CR 766
Query: 773 WP-VPDK--PMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
W +P + P++F+ G++E G+ S+ N EA+ V
Sbjct: 767 WEGLPQQGFPIIFHGVMGKDEREGNSPSFFNPEEAATV 804
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 213 (80.0 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 86/299 (28%), Positives = 140/299 (46%)
Query: 636 AEKSLLDNADVICCTCVGAGDPRLLKIK-FHSILIDESMQATEPECMVPVILGAKQLILV 694
A + ++ ++ CTC L + F +++DE+ EP ++PV+ + + +LV
Sbjct: 791 AVRKVMKTTPIVACTCHHVPRELLFSYRHFDVVIVDEASMVLEP-LLLPVLATSNKFVLV 849
Query: 695 GDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMHPELSKFPSNFFYE 752
GD QL P+V+ +KA + G S E+L G+ L QYRM+ E+S S FYE
Sbjct: 850 GDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHPGV-VVSLTSQYRMNREISVLSSKLFYE 908
Query: 753 GSLQNGVCADER-KLSKIDFPWPVPDKPMLFYVTQGQEEI--AGSGTSYVNRTEASNVEK 809
L +C +E S +D D + + G + I A SG +
Sbjct: 909 NRL---ICGNESVSRSSLD---RTGD--YIVAMDDGSDHIRKALSGDIKDSCVFLDTQST 960
Query: 810 ITTRFIRCGMKPEQIGVITPYEGQR-AFLVQHMQYQGSLPAKI-----YQ---------- 853
I ++ ++C E G+ E + + L Q G P +I Y+
Sbjct: 961 INSK-MQCE-DGEGGGMCNDGEAKLISELCQQFVMSGVKPHEIGVMSAYRRQVDHIRGIL 1018
Query: 854 ---EIEVASVDAFQGREKDLIIMSCVRSNDH-QGIGFLNDPRRLNVALTRAKYGIIVIG 908
E+EV ++D++QGREK +II S +N+ + L D RR+NVALTRA+ ++V+G
Sbjct: 1019 NSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDERRVNVALTRARQKLVVVG 1077
Score = 98 (39.6 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN Q AV HA+ +++G PG+GKT T +++ Q + T VL+ A ++ AVD
Sbjct: 686 LNNEQRKAVVHALATEDFMMVEGLPGSGKT-TLISVLIQCLVATNKKVLLAAFTHSAVDN 744
Query: 564 LTEKIHR--TGLKVVRVCAKSREAIDSPVSFLALHNQIRN 601
+ K+ + K++R+ + S +I + + L ++ N
Sbjct: 745 ILTKLTKEVAAEKILRLGSSS--SIKDDIKKMTLKAKLEN 782
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 252 (93.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 68/211 (32%), Positives = 107/211 (50%)
Query: 736 YRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
YR HP + P+ +YEG LQ D + + P P++F+ G++E G+
Sbjct: 712 YRSHPTILDIPNQLYYEGELQACADVVDRERFCHWE-GLPRQGFPIIFHGVMGKDEREGN 770
Query: 795 GTSYVNRTEASNVEKITTRFI-------RCGMKPEQIGVITPYEGQRAFLVQHM--QYQG 845
S+ N EA+ V + + + P +GVI+PY Q ++H +
Sbjct: 771 SPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQ-VEKIRHCITKLDK 829
Query: 846 SLPA-KIYQEIEVASVDAFQGREKDLIIMSCVRSNDH--Q-----GIGFLNDPRRLNVAL 897
L ++++V SV+ FQG+E+ +I++S VRS+ Q +GFL +P+R NVA+
Sbjct: 830 ELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAV 889
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
TRAK +IV+GNP +L P W L F KE
Sbjct: 890 TRAKALLIVVGNPLLLGHDPDWKVFLEFCKE 920
Score = 225 (84.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 100/333 (30%), Positives = 143/333 (42%)
Query: 506 NRSQVYAVKHAIQ---RPLS-LIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIA 560
N Q+ A+K+ I RP +I GPPGTGKTVT + Q+VK +L CAPSN
Sbjct: 480 NPEQLQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 539
Query: 561 VDQLTEKIHRTGL--KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXX 618
D L +++ R L + R+ A SR+ P N
Sbjct: 540 ADLLCQRL-RVHLPSSIYRLLAPSRDIRMVPEDIKPCCNW-------------------- 578
Query: 619 XXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
+ + + KK E +L + V A P F I IDE+ + EP
Sbjct: 579 --DAKKGDYVFPAKKKLQEYRVLITTLITASRLVSAQFPI---DHFTHIFIDEAGHSMEP 633
Query: 679 ECMVPV--ILGAK-------QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL---- 725
E +V + ++ K QL+L GD QLGPV+ + GL SL ERL+
Sbjct: 634 ESLVAIAGLMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALY 693
Query: 726 -----GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VP 776
G P F +L YR HP + P+ +YEG LQ CAD + W +P
Sbjct: 694 KKGSNGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQ--ACADVVDRERFCH-WEGLP 750
Query: 777 DK--PMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
+ P++F+ G++E G+ S+ N EA+ V
Sbjct: 751 RQGFPIIFHGVMGKDEREGNSPSFFNPEEAATV 783
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 252 (93.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 68/211 (32%), Positives = 107/211 (50%)
Query: 736 YRMHPELSKFPSNFFYEGSLQNGV-CADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGS 794
YR HP + P+ +YEG LQ D + + P P++F+ G++E G+
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCHWE-GLPRQGFPIIFHGVMGKDEREGN 790
Query: 795 GTSYVNRTEASNVEKITTRFI-------RCGMKPEQIGVITPYEGQRAFLVQHM--QYQG 845
S+ N EA+ V + + + P +GVI+PY Q ++H +
Sbjct: 791 SPSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQ-VEKIRHCITKLDK 849
Query: 846 SLPA-KIYQEIEVASVDAFQGREKDLIIMSCVRSNDH--Q-----GIGFLNDPRRLNVAL 897
L ++++V SV+ FQG+E+ +I++S VRS+ Q +GFL +P+R NVA+
Sbjct: 850 ELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAV 909
Query: 898 TRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
TRAK +IV+GNP +L P W L F KE
Sbjct: 910 TRAKALLIVVGNPLLLGHDPDWKVFLEFCKE 940
Score = 225 (84.3 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 100/333 (30%), Positives = 143/333 (42%)
Query: 506 NRSQVYAVKHAIQ---RPLS-LIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIA 560
N Q+ A+K+ I RP +I GPPGTGKTVT + Q+VK +L CAPSN
Sbjct: 500 NPEQLQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 559
Query: 561 VDQLTEKIHRTGL--KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXX 618
D L +++ R L + R+ A SR+ P N
Sbjct: 560 ADLLCQRL-RVHLPSSIYRLLAPSRDIRMVPEDIKPCCNW-------------------- 598
Query: 619 XXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEP 678
+ + + KK E +L + V A P F I IDE+ + EP
Sbjct: 599 --DAKKGDYVFPAKKKLQEYRVLITTLITASRLVSAQFPI---DHFTHIFIDEAGHSMEP 653
Query: 679 ECMVPV--ILGAK-------QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL---- 725
E +V + ++ K QL+L GD QLGPV+ + GL SL ERL+
Sbjct: 654 ESLVAIAGLMEVKETDNPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALY 713
Query: 726 -----GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP-VP 776
G P F +L YR HP + P+ +YEG LQ CAD + W +P
Sbjct: 714 KKGSNGYNPQFITKLLRNYRSHPTILDIPNQLYYEGELQ--ACADVVDRERFCH-WEGLP 770
Query: 777 DK--PMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
+ P++F+ G++E G+ S+ N EA+ V
Sbjct: 771 RQGFPIIFHGVMGKDEREGNSPSFFNPEEAATV 803
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 208 (78.3 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 79/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L K +++L GDH QL P V + A L SL +R
Sbjct: 788 FTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 847
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + DF
Sbjct: 848 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDF------ 897
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 898 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 957
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 958 DQ-VFRIR-----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKK 1011
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1012 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1054
Score = 103 (41.3 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 31/74 (41%), Positives = 40/74 (54%)
Query: 503 PDLNRSQVYAVKHAIQRPLS------LIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
P LN Q AV AI PLS LI GP GTGKT T A V +++Q + +L+C
Sbjct: 640 PRLNAKQKEAVL-AITTPLSIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTH 698
Query: 557 SNIAVD-QLTEKIH 569
SN A D + + +H
Sbjct: 699 SNSAADLYIKDYLH 712
Score = 42 (19.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 623 SADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSIL 668
S + Y M K+ ++LL C G + IK S+L
Sbjct: 16 SLKRQDYEMALKHCTEALLSLGQYSMADCTGPCPLEIESIKIESLL 61
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 208 (78.3 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 79/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L K +++L GDH QL P V + A L SL +R
Sbjct: 788 FTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 847
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + DF
Sbjct: 848 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDF------ 897
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 898 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 957
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 958 DQ-VFRIR-----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKK 1011
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1012 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1054
Score = 103 (41.3 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 31/74 (41%), Positives = 40/74 (54%)
Query: 503 PDLNRSQVYAVKHAIQRPLS------LIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
P LN Q AV AI PLS LI GP GTGKT T A V +++Q + +L+C
Sbjct: 640 PRLNAKQKEAVL-AITTPLSIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTH 698
Query: 557 SNIAVD-QLTEKIH 569
SN A D + + +H
Sbjct: 699 SNSAADLYIKDYLH 712
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 174 (66.3 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 78/284 (27%), Positives = 127/284 (44%)
Query: 664 FHSILIDESMQATEPECMVPVILG--AKQLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F I +DE+ QA E E ++P+ L + +++L GDH Q+ P + A L SL ER
Sbjct: 951 FTHIFLDEAAQAMECEAIMPLALANDSTRIVLAGDHMQMSPELFSAFAKERKLHISLLER 1010
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F ++ YR H + +F S FYE L V + ++ P D
Sbjct: 1011 LYDHYPSNFPCKILLCENYRAHEAIIRFTSELFYEQKL---VASGKQ---------PRHD 1058
Query: 778 K--PMLFYVTQGQEEIAGSGTSYVNRTEASNV-EKITTRFIRC----G-MKPEQIGVITP 829
+ P+ F+ T+G++ + T++ N E V E+++ R G + IG++TP
Sbjct: 1059 RFYPLTFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAWGKLNDTSIGIMTP 1118
Query: 830 YEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH---QG--- 883
Y Q F ++ L + I V V QG++ + +S VR+ QG
Sbjct: 1119 YSDQ-VFRIR-----SELRKRRMGGISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAP 1172
Query: 884 --------------IGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1173 GSASTTSIGDADADYGFLSNSKLLNTAITRAQSLVAVVGDPVAL 1216
Score = 108 (43.1 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 32/81 (39%), Positives = 42/81 (51%)
Query: 500 PNLPDLNRSQVYAVKHA--IQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
P L R V A+ A I+ P L+ GP GTGKT T A + QL+ Q + +L+C S
Sbjct: 804 PKLNAKQREAVNAITTALSIKLPPILLIGPFGTGKTYTLAQAIKQLLTQPEAKILICTHS 863
Query: 558 NIAVD-QLTEKIH---RTGLK 574
N A D + E +H GLK
Sbjct: 864 NSAADLYIKEYLHPWIEEGLK 884
Score = 81 (33.6 bits), Expect = 2.6e-17, Sum P(3) = 2.6e-17
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 885 GFLNDPRRLNVALTRAKYGIIVIGNPKVLSK----QPLWNNLLNFYKEQKVLVEGPLNNL 940
GFL++ + LN A+TRA+ + V+G+P L + +W + E K L +NL
Sbjct: 1188 GFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDEHKSLFGLTWSNL 1247
Query: 941 KESL 944
+ L
Sbjct: 1248 RSQL 1251
Score = 39 (18.8 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 496 HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPG 529
+F P + D+ R ++ V +I L+ + P G
Sbjct: 916 NFLRPTVEDIMRHRIVVVTLSISMELATLGLPKG 949
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 204 (76.9 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 78/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L + +++L GDH QL P V + A L SL +R
Sbjct: 788 FTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 847
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + DF
Sbjct: 848 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDF------ 897
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 898 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 957
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 958 DQ-VFRIR-----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKK 1011
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1012 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1054
Score = 104 (41.7 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 30/73 (41%), Positives = 39/73 (53%)
Query: 503 PDLNRSQVYAVKH-----AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPS 557
P LN Q AV AIQ P LI GP GTGKT T A V +++Q + +L+C S
Sbjct: 640 PRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHS 699
Query: 558 NIAVD-QLTEKIH 569
N A D + + +H
Sbjct: 700 NSAADLYIKDYLH 712
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 204 (76.9 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 78/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L + +++L GDH QL P V + A L SL +R
Sbjct: 789 FTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 848
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + DF
Sbjct: 849 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDF------ 898
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 899 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 958
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 959 DQ-VFRIR-----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKK 1012
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1013 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1055
Score = 98 (39.6 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 31/74 (41%), Positives = 39/74 (52%)
Query: 503 PDLNRSQVYAVKH-----AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTG-SPVLVCAP 556
P LN Q AV AIQ P LI GP GTGKT T A V +++Q S +L+C
Sbjct: 640 PRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTH 699
Query: 557 SNIAVD-QLTEKIH 569
SN A D + + +H
Sbjct: 700 SNSAADLYIKDYLH 713
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 208 (78.3 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 78/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F +L+DE+ QA E E ++P+ L K +++L GDH QL P V + A L SL +R
Sbjct: 788 FTHVLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 847
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + DF
Sbjct: 848 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDF------ 897
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 898 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 957
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 958 DQ-VFRIR-----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKK 1011
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1012 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPVAL 1054
Score = 99 (39.9 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 30/74 (40%), Positives = 39/74 (52%)
Query: 503 PDLNRSQVYAVKHAIQRPLS------LIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAP 556
P LN Q AV AI PLS LI GP GTGKT T A +++Q + +L+C
Sbjct: 640 PRLNAKQKEAVL-AITTPLSIQLPPVLIIGPYGTGKTFTLAQAAKHILQQQETRILICTH 698
Query: 557 SNIAVD-QLTEKIH 569
SN A D + + +H
Sbjct: 699 SNSAADLYIKDYLH 712
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 248 (92.4 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 122/463 (26%), Positives = 206/463 (44%)
Query: 502 LPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
L LN+ Q A+K + + +LI G PGTGKT T T+V +++ G VL+ + ++ A
Sbjct: 941 LKGLNKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV-RILHACGFSVLLTSYTHSA 999
Query: 561 VDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXXXX 620
VD + K+ R + +R+ + +H++I
Sbjct: 1000 VDNILLKLKRFKIGFLRLGRPQK-----------VHHEILPF-----------------T 1031
Query: 621 XSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKFHSILIDESMQATEPEC 680
+ K + L++ + L ++ TC+G P + +F ++DE+ Q ++P C
Sbjct: 1032 EEACRAKGIQTLEELEQ--LYSRELIVATTCMGVKHPIFSRRRFDFCIVDEASQISQPVC 1089
Query: 681 MVP-------VILGAKQ----LILVGDHCQLG--------------PVVMCKKAARAGLS 715
+ P V++G Q ++ + LG VV R +
Sbjct: 1090 IGPLFYAQRFVLVGDHQQLPPIVQNAEARSLGMDESLFKRLEHHRDAVVQLNVQYRMNSA 1149
Query: 716 -QSLFERLVVLGIRPFRLEV-QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPW 773
SL L+ G RLE + + + PS E L+ VC + + +
Sbjct: 1150 IMSLSNALMYEG----RLECGSEKTANAVLQLPSRAQAEEELELYVCQPQYS-AWVQAAL 1204
Query: 774 PVPDKPMLFYVTQ---GQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPY 830
P+ P+ F T E + SG S N TEA V+ + T ++ G + IGVI PY
Sbjct: 1205 E-PNSPVCFLDTSEVPAPETVEKSGIS--NHTEAVLVQGLVTLLLKAGCRACDIGVIAPY 1261
Query: 831 EGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLND 889
Q+ ++ + QG ++ +EV +VD +QGR+K +II+S VRSN +G L D
Sbjct: 1262 R-QQLKVISSL-LQGDA----FKALEVNTVDKYQGRDKSVIIVSFVRSNAEGNLGELLQD 1315
Query: 890 PRRLNVALTRAKYGIIVIGNPKVLSKQ-PLWNNLLNFYKEQKV 931
RRLNVA+TRAK+ ++++G+ L + PL L + +E +
Sbjct: 1316 WRRLNVAITRAKHKLLMLGSAPTLRRYAPLEKLLCHLQQEDMI 1358
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 206 (77.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 79/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L K +++L GDH QL P V + A L SL +R
Sbjct: 777 FTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 836
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + DF
Sbjct: 837 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDF------ 886
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 887 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 946
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 947 DQ-VFRIR-----AELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKR 1000
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1001 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1043
Score = 98 (39.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 32/75 (42%), Positives = 40/75 (53%)
Query: 503 PDLNRSQVYAVKHAIQRPLS------LIQGPPGTGKTVTSATIVYQLVKQTG-SPVLVCA 555
P LN Q AV AI PLS LI GP GTGKT T A V +++Q S +L+C
Sbjct: 628 PRLNAKQKEAVL-AITTPLSIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQDTSRILICT 686
Query: 556 PSNIAVD-QLTEKIH 569
SN A D + + +H
Sbjct: 687 HSNSAADLYIKDYLH 701
Score = 44 (20.5 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 10/17 (58%), Positives = 11/17 (64%)
Query: 512 AVKHAIQRPLSLIQGPP 528
AVKH + LSL Q PP
Sbjct: 14 AVKHCTEALLSLSQYPP 30
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 209 (78.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 79/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L K +++L GDH QL P V + A L SL +R
Sbjct: 789 FTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 848
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + DF
Sbjct: 849 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDF------ 898
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 899 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 958
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 959 DQ-VFRIR-----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKK 1012
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1013 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPVAL 1055
Score = 94 (38.1 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 30/74 (40%), Positives = 38/74 (51%)
Query: 503 PDLNRSQVYAVKH-----AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTG-SPVLVCAP 556
P LN Q AV IQ P LI GP GTGKT T A V +++Q S +L+C
Sbjct: 640 PRLNAKQKEAVLAITTPLCIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTH 699
Query: 557 SNIAVD-QLTEKIH 569
SN A D + + +H
Sbjct: 700 SNSAADLYIKDYLH 713
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 204 (76.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 78/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L + +++L GDH QL P V + A L SL +R
Sbjct: 789 FTHILLDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDR 848
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + DF
Sbjct: 849 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKDF------ 898
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 899 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 958
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 959 DQ-VFRIR-----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKK 1012
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1013 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1055
Score = 98 (39.6 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 31/74 (41%), Positives = 39/74 (52%)
Query: 503 PDLNRSQVYAVKH-----AIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTG-SPVLVCAP 556
P LN Q AV AIQ P LI GP GTGKT T A V +++Q S +L+C
Sbjct: 640 PRLNAKQKEAVLAITTPLAIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTH 699
Query: 557 SNIAVD-QLTEKIH 569
SN A D + + +H
Sbjct: 700 SNSAADLYIKDYLH 713
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 216 (81.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 53/145 (36%), Positives = 82/145 (56%)
Query: 789 EEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLP 848
E++ G S N TEA + +T+ F++ G P IG+I PY Q ++ L
Sbjct: 666 EQVEKGGVS--NVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYR-------QQLKIINDLL 716
Query: 849 AKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVI 907
A+ +EV +VD +QGR+K ++++S VRSN +G L D RRLNVA+TRAK+ +I++
Sbjct: 717 ARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAKHKLILL 776
Query: 908 GNPKVLSKQPLWNNLLNFYKEQKVL 932
G L+ P LLN +K++
Sbjct: 777 GCVPSLNCYPPLEKLLNHLNSEKLI 801
Score = 76 (31.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 492 HLPKHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIV 540
H K A L LN+ Q A+K + + +LI G PGTGKT T T+V
Sbjct: 613 HDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV 662
Score = 44 (20.5 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 446 DFIWKSTS--FDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF--RCHLPKHFSAPN 501
DF+ K+TS F +MQL+L D S + + +++E ++ R L
Sbjct: 223 DFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPM--DIEESIWSPRFGLKGKIDVTV 280
Query: 502 LPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQ 546
++R Y K+ I PL L G S ++Y L+ Q
Sbjct: 281 GVKIHRG--YKTKYKIM-PLELKTGKESNSIEHRSQVVLYTLLSQ 322
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 251 (93.4 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 68/213 (31%), Positives = 110/213 (51%)
Query: 736 YRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSG 795
YR HP + P+ +YEG LQ +R+ P P++F+ G++E G+
Sbjct: 732 YRSHPTILDIPNQLYYEGELQACADVVDRERFCRWAGLPRQGFPIIFHGVMGKDEREGNS 791
Query: 796 TSYVNRTEASNVEKITTRFI-------RCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSL 847
S+ N EA+ V + + + P +GVI+PY Q V+ ++Y L
Sbjct: 792 PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQ----VEKIRYCITKL 847
Query: 848 PAKI-----YQEIEVASVDAFQGREKDLIIMSCVRSNDH--Q-----GIGFLNDPRRLNV 895
++ ++++V SV+ FQG+E+ +I++S VRS+ Q +GFL +P+R NV
Sbjct: 848 DRELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNV 907
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKE 928
A+TRAK +I++GNP +L P W L F KE
Sbjct: 908 AVTRAKALLIIVGNPLLLGHDPDWKVFLEFCKE 940
Score = 229 (85.7 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 104/338 (30%), Positives = 150/338 (44%)
Query: 506 NRSQVYAVKHAIQ---RPLS-LIQGPPGTGKTVTSATIVYQLVKQTGSP-VLVCAPSNIA 560
N Q+ A++H + RP +I GPPGTGKTVT + Q+VK +L CAPSN
Sbjct: 500 NPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSG 559
Query: 561 VDQLTEKIHRTGL--KVVRVCAKSREAIDSPVSFLALHNQIRNMEMNSXXXXXXXXXXXX 618
D L +++ R L + R+ A SR+ P N
Sbjct: 560 ADLLCQRL-RVHLPSSIYRLLAPSRDIRMVPEDIKPCCNW-------------------- 598
Query: 619 XXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF---H--SILIDESM 673
D K+ + A+K L + V+ T + AG RL+ +F H I IDE+
Sbjct: 599 ------DAKKGEYVFP-AKKKLQEYR-VLITTLITAG--RLVSAQFPIDHFTHIFIDEAG 648
Query: 674 QATEPECMVPV--ILGAK-------QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVV 724
EPE +V + ++ K QL+L GD QLGPV+ + GL SL ERL+
Sbjct: 649 HCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLT 708
Query: 725 L---------GIRP-F--RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFP 772
G P F +L YR HP + P+ +YEG LQ CAD +
Sbjct: 709 YNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPNQLYYEGELQ--ACADVVDRERF-CR 765
Query: 773 WP-VPDK--PMLFYVTQGQEEIAGSGTSYVNRTEASNV 807
W +P + P++F+ G++E G+ S+ N EA+ V
Sbjct: 766 WAGLPRQGFPIIFHGVMGKDEREGNSPSFFNPEEAATV 803
Score = 37 (18.1 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 316 LNKKSIAYFSLAKTDGDGYQYQNI 339
L ++ + Y SL K DGY Q I
Sbjct: 702 LLERLLTYNSLYKKGPDGYDPQFI 725
>UNIPROTKB|F1SRZ7 [details] [associations]
symbol:F1SRZ7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
GO:GO:0005681 GO:GO:0000398 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:CU633172
Ensembl:ENSSSCT00000005301 Uniprot:F1SRZ7
Length = 1206
Score = 194 (73.4 bits), Expect = 9.5e-15, Sum P(3) = 9.5e-15
Identities = 80/283 (28%), Positives = 133/283 (46%)
Query: 631 MLKKNAEKS---LLDNADVICCTCVGAGDPR--LLKI--KFHSILIDESMQATEPECMVP 683
+L+ ++S L+ A +I TC A R L+K+ K+ +IL++E+ Q E E +P
Sbjct: 933 LLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIP 992
Query: 684 VIL-----GAKQL---ILVGDHCQLGPVVMCKKAAR-AGLSQSLFERLVVLGIRPFRLEV 734
++L G +L I++GDH QL PV+ + + + QSLF R V +G+ L+
Sbjct: 993 LLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDA 1052
Query: 735 QYRMHPELSKFPSNFFYE--GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVT--QGQEE 790
Q R L N+ Y+ G+L + E + + L V QG E
Sbjct: 1053 QGRARASLCNL-YNWRYKNLGNLPHVQLLPEFSTANAGLLYDF----QLINVEDFQGVGE 1107
Query: 791 IAGSGTSYVNRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPA 849
+ Y N EA V + G ++I ++T Y GQ+ + + + GS P
Sbjct: 1108 SEPNPYFYQNLGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPL 1167
Query: 850 KIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFLNDPRR 892
I + +V +VD FQG++ D I++S VR+ + +G L R+
Sbjct: 1168 -IGRPNKVTTVDRFQGQQNDYILLSLVRT---RAVGHLRYVRK 1206
Score = 91 (37.1 bits), Expect = 9.5e-15, Sum P(3) = 9.5e-15
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 494 PKHFSAP--NLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSP- 550
P ++ P N +Q+ A++ +Q L++ GPPGTGKT + I+ + +
Sbjct: 706 PYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMGVGPPGTGKTDVAVPIISNIYRNFPEQR 765
Query: 551 VLVCAPSNIAVDQLTEKI 568
+ SN A++QL EKI
Sbjct: 766 TRIVTRSNHALNQLFEKI 783
Score = 44 (20.5 bits), Expect = 9.5e-15, Sum P(3) = 9.5e-15
Identities = 18/86 (20%), Positives = 38/86 (44%)
Query: 240 QIAKLEEVWKDNAEATFQDLEKPGVDEDPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRL 299
Q+ +E+ D E T D++ +L +D I L ++ D+R+
Sbjct: 396 QLTSSDEIQLDCFEMTLMDIDGLYAKHIFGYLLRMLKDLVSIHGIKVSNFNLISE-DRRM 454
Query: 300 K--ESQTQENVTVRWDVGLNKKSIAY 323
+ + +T+ N+ +R +GL K + +
Sbjct: 455 RICQQKTESNLILRILLGLRKHDVCF 480
Score = 42 (19.8 bits), Expect = 3.0e-14, Sum P(4) = 3.0e-14
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 351 DKRLK--ESQTQENVTVRWDVGLNKKSIAY 378
D+R++ + +T+ N+ +R +GL K + +
Sbjct: 451 DRRMRICQQKTESNLILRILLGLRKHDVCF 480
Score = 41 (19.5 bits), Expect = 3.0e-14, Sum P(4) = 3.0e-14
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 324 FSLAKTDGDGYQYQNIFGPLVKLEAD 349
F + D DG ++IFG L+++ D
Sbjct: 408 FEMTLMDIDGLYAKHIFGYLLRMLKD 433
>UNIPROTKB|Q8EA89 [details] [associations]
symbol:SO_4019 "P-loop containing nucleoside triphosphate
hydrolase superfamily" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001261 PROSITE:PS00758 GO:GO:0006508
GO:GO:0008237 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_719549.1 ProteinModelPortal:Q8EA89 GeneID:1171647
KEGG:son:SO_4019 PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 149 (57.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 66/265 (24%), Positives = 113/265 (42%)
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA C+ P + AK ++VGD QL +A + + L
Sbjct: 524 FDLVIIDEATQANIAACL-PALQRAKAALVVGDSKQLRHFSFLSRAKQTQIQTQLGLAPD 582
Query: 724 VLGIRPFR--------------------LEVQYRMHPELSKFPSNFFYEGSL---QNGVC 760
G+ +R L +R PEL +F + FY+G L Q+ C
Sbjct: 583 CRGLMSYRDASMLDLVSQSLASQSQVVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRPC 642
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RC 817
L ++ +VT G + G +N EA + + ++ I
Sbjct: 643 TSSGHLHRV-------------HVT-GSRDSKG-----INAIEAEALIQKLSQLIDEQEN 683
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS-CV 876
+ P IGV++ + Q +L Q + + S ++ +A+ FQG E+D++++S +
Sbjct: 684 ALVPSSIGVLSCFRNQAEYLSQQILARFSAQQLERHQLRIATPFGFQGEERDIMLLSFSI 743
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAK 901
+ND + +LN NVA+TRAK
Sbjct: 744 TANDSRAAVYLNREDMFNVAITRAK 768
Score = 130 (50.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 38/105 (36%), Positives = 56/105 (53%)
Query: 502 LPDL-NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP L +R+Q+ A+K A L I GPPGTGK+ T AT+ + V + G VL+ A +++A
Sbjct: 255 LPGLLSRAQIQALKVAANHTLGQISGPPGTGKSYTIATVAAEQVLR-GKSVLIVAHTDVA 313
Query: 561 VDQLTEKIHRT---GLKVVRVCAKSREAIDSPVSFLALHNQIRNM 602
VD + +K+ + G ++R SP L NQI M
Sbjct: 314 VDVIADKLQQQFQLGSSLIRA--------GSPQFIKVLKNQIDEM 350
>TIGR_CMR|SO_4019 [details] [associations]
symbol:SO_4019 "hypothetical protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001261
PROSITE:PS00758 GO:GO:0006508 GO:GO:0008237 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_719549.1
ProteinModelPortal:Q8EA89 GeneID:1171647 KEGG:son:SO_4019
PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 149 (57.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 66/265 (24%), Positives = 113/265 (42%)
Query: 664 FHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLV 723
F ++IDE+ QA C+ P + AK ++VGD QL +A + + L
Sbjct: 524 FDLVIIDEATQANIAACL-PALQRAKAALVVGDSKQLRHFSFLSRAKQTQIQTQLGLAPD 582
Query: 724 VLGIRPFR--------------------LEVQYRMHPELSKFPSNFFYEGSL---QNGVC 760
G+ +R L +R PEL +F + FY+G L Q+ C
Sbjct: 583 CRGLMSYRDASMLDLVSQSLASQSQVVFLNEHFRSKPELIQFSNQQFYQGMLKIMQHRPC 642
Query: 761 ADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASNVEKITTRFI---RC 817
L ++ +VT G + G +N EA + + ++ I
Sbjct: 643 TSSGHLHRV-------------HVT-GSRDSKG-----INAIEAEALIQKLSQLIDEQEN 683
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMS-CV 876
+ P IGV++ + Q +L Q + + S ++ +A+ FQG E+D++++S +
Sbjct: 684 ALVPSSIGVLSCFRNQAEYLSQQILARFSAQQLERHQLRIATPFGFQGEERDIMLLSFSI 743
Query: 877 RSNDHQGIGFLNDPRRLNVALTRAK 901
+ND + +LN NVA+TRAK
Sbjct: 744 TANDSRAAVYLNREDMFNVAITRAK 768
Score = 130 (50.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 38/105 (36%), Positives = 56/105 (53%)
Query: 502 LPDL-NRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIA 560
LP L +R+Q+ A+K A L I GPPGTGK+ T AT+ + V + G VL+ A +++A
Sbjct: 255 LPGLLSRAQIQALKVAANHTLGQISGPPGTGKSYTIATVAAEQVLR-GKSVLIVAHTDVA 313
Query: 561 VDQLTEKIHRT---GLKVVRVCAKSREAIDSPVSFLALHNQIRNM 602
VD + +K+ + G ++R SP L NQI M
Sbjct: 314 VDVIADKLQQQFQLGSSLIRA--------GSPQFIKVLKNQIDEM 350
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 193 (73.0 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 67/244 (27%), Positives = 114/244 (46%)
Query: 652 VGAGDPRLLKIKFHSILIDESMQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAR 711
+G P + F ++DE+ Q ++P C+ P+ +++ +LVGDH QL P+V+ ++A
Sbjct: 1 MGINHPIFSRKTFDFCIVDEASQISQPICLGPLFF-SRRFVLVGDHQQLPPLVLNREARA 59
Query: 712 AGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNG---VCADERKLSK 768
G+S+SLF+RL +L VQYRM+ ++ + YEG L+ G V + L K
Sbjct: 60 LGMSESLFKRLEQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVASAVVNLPK 119
Query: 769 I-------DFPWPVPDKPMLFYVTQGQEEIAGSGTSYV---NRTEASNVEKITTRFIRCG 818
+ +F + P + + + T V + E V IT +
Sbjct: 120 LKDVKLELEFYADYSENPWMVGAFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLVVY 179
Query: 819 MKPEQIGV-ITPYE-GQRAFLVQHMQYQGSLPA-KIYQEIEVASVDAFQGREKDLIIMSC 875
+ + P G A Q ++ L + +EV +VD +QGR+K +I++S
Sbjct: 180 LTSIFVKAGCNPCNIGIIAPYRQQLKVINDLLSHSSVGMVEVNTVDKYQGRDKSIILVSF 239
Query: 876 VRSN 879
VRSN
Sbjct: 240 VRSN 243
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 209 (78.6 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 60/214 (28%), Positives = 106/214 (49%)
Query: 731 RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEE 790
+L + YR HP + + P+ FY+G L+ + P P++F+ G++E
Sbjct: 754 KLIMNYRSHPYILEVPNRLFYDGELKACADEISSNQYCMWEHLPSKGFPVIFHGVPGKDE 813
Query: 791 IAGSGTSYVNRTEAS----NVEKITTRFIRCGMK---PEQIGVITPYEGQRAFLVQHMQY 843
+ S+ N E + ++K+ + G+ P+ IG+I PY Q + + +
Sbjct: 814 RESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVEKIKRAIDA 873
Query: 844 QGSLPAKI-YQEIEVASVDAFQGREKDLIIMSCVRSN------DHQ-GIGFLNDPRRLNV 895
+ ++V SV+ FQG+E+ +I++S VRS+ D IGFL + +R NV
Sbjct: 874 DKDFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETFNIGFLKNEKRFNV 933
Query: 896 ALTRAKYGIIVIGNPKVLSKQPLWNNLLNFYKEQ 929
A+TRAK +I++GNP +L W ++F E+
Sbjct: 934 AVTRAKSLLIMVGNPMILRTDESWGRFIDFCLER 967
Score = 170 (64.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 98/388 (25%), Positives = 163/388 (42%)
Query: 442 GFSVDFIWKSTSFDRMQLALRKFAVDDQSVSAY--IYHRLLGHNVDEVLFRCHLPKHFSA 499
G S F+ K D+M+ + +F V+ V H + HN+ +VLF +
Sbjct: 459 GLSKRFL-KDVYIDKMKFRV-EFTVNRIPVRLQHRAVHMAVQHNLKDVLFP--MASRSLN 514
Query: 500 PNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNI 559
P P R +++ Q+ ++ GT K + +V+ TG V +
Sbjct: 515 PVSPPALRLFDRKLEYNFQQYSAVCNIVAGTSKP--APYLVFG-PPGTGKTVTIVE---- 567
Query: 560 AVDQLTEKIHRTGLKVVRVCAKSREAIDSPVSFLALHNQI---RNMEMNSXXXXXXXXXX 616
A+ Q+ + I + CA S A D L + + + +
Sbjct: 568 AIKQVEKNIPDA---YILACAPSNSAADQLCEKLITSEHVDAHKIYRLYASSRNQKDIPK 624
Query: 617 XXXXXSSADEKRYRMLKKNAEKSLLDNADVICCTCVGAGDPRLLKIKF---HSI--LIDE 671
+ DE+ M+ ++ L+ + ++ CT V AG RL+ F H +DE
Sbjct: 625 ILKDNCNVDEE---MIDFPCKEDLM-SYKILICTLVTAG--RLVTGGFSEDHFTHNFVDE 678
Query: 672 SMQATEPECMVPV--ILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-- 725
+ A E E ++ V +L A+ QL+L GD QLGP++ A GL SL ERL+
Sbjct: 679 AGHAVESETIISVAGLLNAEKGQLVLAGDPKQLGPILRSPLAINHGLDVSLLERLMTQND 738
Query: 726 ----GIRPF------RLEVQYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWP- 774
G F +L + YR HP + + P+ FY+G L+ CADE ++ W
Sbjct: 739 LYKRGDVEFDNRYVSKLIMNYRSHPYILEVPNRLFYDGELK--ACADEISSNQYCM-WEH 795
Query: 775 VPDK--PMLFYVTQGQEEIAGSGTSYVN 800
+P K P++F+ G++E + S+ N
Sbjct: 796 LPSKGFPVIFHGVPGKDERESNSPSFFN 823
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 174 (66.3 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 78/268 (29%), Positives = 120/268 (44%)
Query: 693 LVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYE 752
L+ C G V G+S+SLF+RL +L VQYRM+ ++ + YE
Sbjct: 780 LIHHQCFKGCVKSVSLVRELGMSESLFKRLERNQEAVVQLTVQYRMNSQIMALSNKLVYE 839
Query: 753 GSLQNGVCADERKLSKIDFPWPVPDKPMLFYVTQGQEEIAGSGTSYVNRTEASN-VEKIT 811
G L+ CA +R + + +P L + +E V E SN V +
Sbjct: 840 GRLE---CASDRVSNAVV---KLPHIKTLLLELEFRESQESMWIKDV--LEPSNPVCFLN 891
Query: 812 TRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQ-GSLPAKI-----YQE----------- 854
T I E+ G+ E + F + + + G P+ I Y++
Sbjct: 892 TEKIPALETEEKGGISNWIEAKLVFCLTKLFLKAGCRPSDIGIIAPYRQQLKVISNYFNS 951
Query: 855 -----IEVASVDAFQGREKDLIIMSCVRSNDHQGIG-FLNDPRRLNVALTRAKYGIIVIG 908
+EV +VD +QGR+K +II+S VRSN +G L D RRLNVALTRAK+ +I++G
Sbjct: 952 LSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGKLGDLLKDWRRLNVALTRAKHKLIMLG 1011
Query: 909 NPKVLSKQPLWNNLLNFYKEQKVLVEGP 936
LS+ L+ K + + + P
Sbjct: 1012 CVPTLSRFLCLEQLICHLKSKNHIYDLP 1039
Score = 84 (34.6 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 495 KHFSAPNLPDLNRSQVYAVKHAI-QRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLV 553
K A L LN+ Q A+K + + +LI G PGTGKT T T+V L +T + LV
Sbjct: 617 KDIVANILKGLNKPQKQAMKRVLLSKDYTLIVGMPGTGKTTTICTLVSTLHLKTCTSCLV 676
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 137 (53.3 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 505 LNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQL 564
LN SQ+ AV+ A +SLI+GPPGTGKT T I+ ++ Q G V V + +N AV +
Sbjct: 30 LNESQLKAVEQAFSSQISLIEGPPGTGKTQTILNIIANILLQ-GKTVAVVSNNNAAVKNV 88
Query: 565 TEKIHRTGL 573
EK+ + GL
Sbjct: 89 YEKLGKCGL 97
Score = 86 (35.3 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 825 GVITPYEGQRAFLVQHMQYQGS-LPAKIYQEIEVASVDAFQGREKDLIIMSCV--RSNDH 881
G I P++ Q GS LPA + +V FQGRE D I+ S V +
Sbjct: 485 GFIAPFKNQATL-------SGSCLPADFIND----TVHKFQGRECDEIVFSTVLDKHKSP 533
Query: 882 QGIGFLNDPRRLNVALTRAK 901
+ + F++D R +NVA++RAK
Sbjct: 534 ERLSFVDDARMVNVAVSRAK 553
Score = 76 (31.8 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 667 ILIDESMQATEPECMVPVILG---AKQLILVGDHCQLG--PVVMCKKAARAGL---SQSL 718
++IDE+ Q + +VP +L AK LI+VGD QL P + +A + SL
Sbjct: 336 VIIDEASQ----QDIVPGVLALSCAKNLIIVGDRKQLAHIPEKLGLEAPAPWYDCETYSL 391
Query: 719 FERLV-VLG--IRPFRLEVQYRMHPELSKFPSNFFYEGSL 755
+ V V G I L+ YR HP + +F + FY+ L
Sbjct: 392 LDSCVGVFGDSIPMTLLKEHYRCHPRIIQFCNQQFYDNQL 431
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 165 (63.1 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 43/131 (32%), Positives = 65/131 (49%)
Query: 800 NRTEASNVEKITTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVAS 859
N EA + + G+ E IGV+T Y Q L + +Y +E+ +
Sbjct: 1337 NHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIFN------KNVYDGLEILT 1390
Query: 860 VDAFQGREKDLIIMSCVRSNDH-QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPL 918
D FQGR+K II+S VR N G L + RR+NVA+TRAK +I+IG+ + P
Sbjct: 1391 ADQFQGRDKKCIIISMVRRNSQLNGGALLKELRRVNVAMTRAKSKLIIIGSKSTIGSVPE 1450
Query: 919 WNNLLNFYKEQ 929
+ +N +E+
Sbjct: 1451 IKSFVNLLEER 1461
Score = 156 (60.0 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 72/281 (25%), Positives = 118/281 (41%)
Query: 629 YRMLKK-NAEKSLLDNADVICCTCVGAGDPRL-LKIK-FHSILIDESMQATEPECMVPVI 685
Y +K N S +++ V+ TC+G D L K F +++DE+ Q + P + P+
Sbjct: 1142 YASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALGPLR 1201
Query: 686 LGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPF-RLEVQYRMHPELSK 744
G + I+VGDH QL P+V A GL +SLF+ L +QYRM ++
Sbjct: 1202 YG-NRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMCGDIVT 1260
Query: 745 FPSNFF-YEGSLQNGVCADERKLSKIDFPWP----------VPDKPMLFYVTQGQEEIA- 792
SNF Y+ L+ G +E ++ P P K L + + ++
Sbjct: 1261 L-SNFLIYDNKLKCG--NNEVFAQSLELPMPEALSRYRNESANSKQWLEDILEPTRKVVF 1317
Query: 793 ---GSGTSYVNRTEASNVEKI--TTRFIRCGMKPEQIGVITPYEGQRAFLVQHMQYQGSL 847
+ + ++E N+ ++C GV G ++ +
Sbjct: 1318 LNYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKI 1377
Query: 848 PAK-IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGFL 887
K +Y +E+ + D FQGR+K II+S VR N G L
Sbjct: 1378 FNKNVYDGLEILTADQFQGRDKKCIIISMVRRNSQLNGGAL 1418
Score = 103 (41.3 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 505 LNRSQVYAVKHAIQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQTGSPVLVCAPSNIAVDQ 563
LN +Q A+ ++ +LI G PGTGKT A I+ LV + G VL+ + ++ AVD
Sbjct: 1052 LNLNQKEAIDKVMRAEDYALILGMPGTGKTTVIAEIIKILVSE-GKRVLLTSYTHSAVDN 1110
Query: 564 LTEKIHRTGLKVVRVCAKSR 583
+ K+ T + ++R+ K +
Sbjct: 1111 ILIKLRNTNISIMRLGMKHK 1130
Score = 44 (20.5 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 6/19 (31%), Positives = 14/19 (73%)
Query: 731 RLEVQYRMHPELSKFPSNF 749
RL +++++HP+ K+ N+
Sbjct: 1124 RLGMKHKVHPDTQKYVPNY 1142
Score = 41 (19.5 bits), Expect = 3.9e-12, Sum P(4) = 3.9e-12
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 142 AKHKEVTLHKDGPLGETV 159
++H + T +DGP+ E +
Sbjct: 110 SRHHDFTQDEDGPMEEVI 127
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 200 (75.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 77/283 (27%), Positives = 128/283 (45%)
Query: 664 FHSILIDESMQATEPECMVPVILGAK--QLILVGDHCQLGPVVMCKKAARAGLSQSLFER 721
F IL+DE+ QA E E ++P+ L + +++L GDH QL P V + A L SL +R
Sbjct: 793 FTHILLDEAAQAMECETIMPLALATRHTRVVLAGDHMQLSPFVYSEFARERNLHVSLLDR 852
Query: 722 LVVLGIRPFRLEV----QYRMHPELSKFPSNFFYEGSLQNGVCADERKLSKIDFPWPVPD 777
L F + YR H + + S FYEG L A ++ + +F
Sbjct: 853 LYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLM----ASGKQPAHKEF------ 902
Query: 778 KPMLFYVTQGQEEIAGSGTSYVNRTEA----SNVEKITTRF-IRCGMKPE-QIGVITPYE 831
P+ F+ +G++ + T++ N E VE++ ++ + G + IGV+TPY
Sbjct: 903 YPLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYA 962
Query: 832 GQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR-------------- 877
Q F ++ L K ++ V V QG++ ++ +S VR
Sbjct: 963 DQ-VFRIR-----AELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKK 1016
Query: 878 -------SNDHQGIGFLNDPRRLNVALTRAKYGIIVIGNPKVL 913
S + GFL++ + LN A+TRA+ + V+G+P L
Sbjct: 1017 KEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIAL 1059
>UNIPROTKB|Q2KFA1 [details] [associations]
symbol:MGCH7_ch7g785 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CM000230 Uniprot:Q2KFA1
Length = 852
Score = 121 (47.7 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 58/237 (24%), Positives = 84/237 (35%)
Query: 532 KTVTSATIVYQLVKQTGSPVLVCAPSN-IAVDQLTEKIHRTGLKVVRVCAKSREAIDSPV 590
K + T++ + K GS +PSN +AVD T + KV A R D
Sbjct: 390 KVKRAQTLLLEGEKSEGSQSSTQSPSNAVAVDPTTAFLTMAA-KVADNTAGDRFKSDCLA 448
Query: 591 SFLALHNQIRNMEMNSXXXXXXXXXXXXXXXSSADEKRYRMLK---KNAEKSLLDNADVI 647
L R E + R+L+ +N K L+ D +
Sbjct: 449 PALD-QLAFRRFEARKEEYSELEEVLEQYLQDKIEPSTMRILRAATENLYKDTLEEVDFL 507
Query: 648 CCTCVGAGDPRLLKIKFHSILIDESMQATEPECMVPVI-LGAKQLILVGDHCQLGPVVMC 706
T + A + K +L DE+ A E ++P+ I GD Q G V
Sbjct: 508 AATPIAAASLADGRFKPDIVLFDEAPHARELANLIPIAHFSPMAWIFTGDFRQTGCYVGS 567
Query: 707 KKAA-RAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSKFPSNFFYEGSLQNGVCAD 762
K L S+ ER G L + +R L + PSN FY+ + G AD
Sbjct: 568 DKNPWEIQLKMSVMERAHYAGATTHELLMNHRAFATLHQMPSNLFYDAKMVTGHTAD 624
Score = 120 (47.3 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAK-IYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIG 885
+T Y+ L + + +PAK + +EV SVD QG E D + VR +
Sbjct: 714 VTQYKRAAGDLCRELAEAQGVPAKTMLTRLEVRSVDTVQGHEADFVFFDLVREKPTE--- 770
Query: 886 FLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNNLLNFY 926
FL+D +RL VA TRA+ G + + +P + + NL Y
Sbjct: 771 FLDDDKRLAVATTRARQGEVYVMHPMMAKRLCKTKNLHAIY 811
Score = 40 (19.1 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 18/67 (26%), Positives = 26/67 (38%)
Query: 396 LKLRYSYDA-SKTWSGLGHVIKIPDNFGDEVGLELKSSAGAPTEATTGFSVDFIWKSTSF 454
+K+ Y D S +K+ +NFGD G ++ G E G V + K
Sbjct: 336 VKILYLIDINSPVDDATNKCVKMSENFGD--GKQIVRMFGWNREMKQGLKV--LRKKEKV 391
Query: 455 DRMQLAL 461
R Q L
Sbjct: 392 KRAQTLL 398
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 74/276 (26%), Positives = 125/276 (45%)
Query: 657 PRLLKIK--FHSILIDESMQ-ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAG 713
P L +IK F IDE+ Q A + +L ++ILVGD QL P + A A
Sbjct: 306 PDLAEIKDLFDITFIDEASQLALYVLGSLATLLPKTRIILVGDMHQLPPYT--EDALPAE 363
Query: 714 LSQSLFERLVVLGIRPFRLEVQY--RMH--PEL-SKFPSNFFYEGSLQNGVCADERK--L 766
L ++ + L ++ R + R+H P++ + FY +L + A R L
Sbjct: 364 LKRAAVGEPLTLAVKGRRWSSMHLTRVHRCPKMITDLLGAVFYGNTLTSTRKAVNRVPIL 423
Query: 767 SKIDFPWPVPDKPMLF--YVTQGQEEIAGSGTSYVNRTEASNVEKITTRFIRCGMKPE-- 822
++ P P +F Y++Q Q ++ G S+ N EA ++ T R +
Sbjct: 424 EAMELP---SHHPFVFVNYISQ-QTQV---GKSFSNENEARYALQLVTALKRHAREQNTT 476
Query: 823 -QIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDH 881
+ V+ Y Q ++ V + G + V ++D QG+E D+ I+ RS+ +
Sbjct: 477 VSVAVLNFYGAQYSY-VYSIAEDG---------VRVNTIDGCQGQEYDVSIVLLTRSDPY 526
Query: 882 QGIGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
+ FL +P R+NVAL+R+K +VIG ++ P
Sbjct: 527 EKSKFLVNPNRINVALSRSKMATVVIGQRHLIGNHP 562
>WB|WBGene00010989 [details] [associations]
symbol:R03D7.2 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
GO:GO:0006974 EMBL:Z46828 PIR:T23869 RefSeq:NP_496354.1
ProteinModelPortal:Q09594 SMR:Q09594 EnsemblMetazoa:R03D7.2
GeneID:174682 KEGG:cel:CELE_R03D7.2 UCSC:R03D7.2 CTD:174682
WormBase:R03D7.2 eggNOG:KOG1801 GeneTree:ENSGT00530000065249
InParanoid:Q09594 NextBio:885046 Uniprot:Q09594
Length = 542
Score = 153 (58.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 70/271 (25%), Positives = 122/271 (45%)
Query: 660 LKIKFHSILIDESMQ-ATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL 718
+K +F IDE+ Q A + +L ++ILVGD QL P + ++A A L ++
Sbjct: 212 IKDRFDITFIDEASQLALYVLGSLATMLPKSRMILVGDMHQLPPYM--EEALPAELKRAA 269
Query: 719 FERLVVLGIRPFRLEVQY--RMH--PEL-SKFPSNFFYEGSLQN---GVCADERKLSKID 770
+ L ++ R + R+H P++ ++ + FY +L + GV D L +
Sbjct: 270 IGEPLTLAVKGRRWPSMHLTRVHRCPKMITEVLGDLFYGNTLTSSKPGV-TDIPVLKAMG 328
Query: 771 FPWPVPDKPMLFY-VTQGQEEIAGSGTSYVNRTEASNVEKIT---TRFIRCGMKPEQIGV 826
P PM+F T Q + G S+ N EA ++ TR+ K +
Sbjct: 329 LP---SRHPMVFVNYTSPQTAV---GKSFSNEGEARYALQLVEALTRYASTANKKITAAI 382
Query: 827 ITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVRSNDHQGIGF 886
+ Y Q +++ + E+ V ++D QG+E D+ I+ RS+ ++ F
Sbjct: 383 LNFYGAQYSYVYSMAE----------DEVTVNTIDGCQGQEYDVTIVLLTRSDPYERSKF 432
Query: 887 LNDPRRLNVALTRAKYGIIVIGNPKVLSKQP 917
L + R+NVAL+R K ++IG + QP
Sbjct: 433 LVNANRINVALSRPKIATVIIGQRHLTGNQP 463
Score = 49 (22.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 213 ADRSFLSWL---VKVPTEQEQQRGRQVTSAQIAKLEEV-WKDNAEATFQDLEKPGVDED- 267
+ R L W +++ EQ+ Q R+ +S Q +L+ KD F + P +
Sbjct: 53 SQRKQLQWQQQQLRLRKEQQNQSRRRTSSCQKLQLQRSKLKDLESIPFLTVSVPVLSPPL 112
Query: 268 PHQVLLRYEDGY 279
PH YE Y
Sbjct: 113 PHSSNSEYEFAY 124
>ZFIN|ZDB-GENE-050508-3 [details] [associations]
symbol:zgc:113057 "zgc:113057" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026855 ZFIN:ZDB-GENE-050508-3
GO:GO:0004386 eggNOG:COG1112 PANTHER:PTHR10887:SF16 IPI:IPI00492493
EMBL:BC094297 RefSeq:NP_001018332.1 UniGene:Dr.115608
ProteinModelPortal:Q52KK8 GeneID:552926 KEGG:dre:552926
HOGENOM:HOG000007768 InParanoid:Q52KK8 NextBio:20879878
Uniprot:Q52KK8
Length = 231
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/140 (30%), Positives = 73/140 (52%)
Query: 818 GMKPEQIGVITPYEGQRAFLVQHMQYQGSLPAKIYQEIEVASVDAFQGREKDLIIMSCVR 877
G+ PE I ++TPY Q V ++ +L K + + V +V QG E +I+S VR
Sbjct: 69 GVSPEHIAILTPYNAQ----VSEIKM--TLEKKNVRNVTVCTVMKSQGSEWPYVIVSTVR 122
Query: 878 S---NDHQG-------------IGFLNDPRRLNVALTRAKYGIIVIGNPKVLSKQPLWNN 921
S +D Q +GF+ D ++NVA+TRA+ G+ ++GN +L LW+
Sbjct: 123 SCSTSDIQAYRVRPHKAWLGKRLGFVTDANQVNVAITRAQDGLCILGNSDLLRCCELWDR 182
Query: 922 LLNFYKEQKVLVEGPLNNLK 941
LL+ Y + +V P ++++
Sbjct: 183 LLDHYYRKSCVVN-PASDIR 201
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 959 910 0.00089 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 173
No. of states in DFA: 629 (67 KB)
Total size of DFA: 460 KB (2217 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 76.83u 0.14s 76.97t Elapsed: 00:00:08
Total cpu time: 76.91u 0.14s 77.05t Elapsed: 00:00:08
Start: Thu Aug 15 16:28:29 2013 End: Thu Aug 15 16:28:37 2013
WARNINGS ISSUED: 1