BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3253
(251 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/239 (71%), Positives = 191/239 (79%), Gaps = 33/239 (13%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
MQQCDSP+VVKYYGSYFKNTDLWIVMEYCGAGSVSDI+RLR KTL+EDEIATIL TLKG
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH RKIHRDIKAG NILLNTEGHA
Sbjct: 138 LEYLHFMRKIHRDIKAG---------------------------------NILLNTEGHA 164
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KLADFGVAGQLTD MAKRN VIGTPFWMAPEVIQEIGY+CVAD+WSLGITA+EMAEGKPP
Sbjct: 165 KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
Y DIHPMRAIFMIPT PPP+FR+P++W+ F DFV +CLVK+PE+RATA+++L H F++
Sbjct: 225 YADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 240 bits (612), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 150/241 (62%), Gaps = 37/241 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ QCDSPYV KYYGSY K+T LWI+MEY G GS D+ L L E +IATIL + LKG
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL--LEPGPLDETQIATILREILKG 136
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH +KIHRDIKA N+LL+ G
Sbjct: 137 LDYLHSEKKIHRDIKAA---------------------------------NVLLSEHGEV 163
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KLADFGVAGQLTDT KRNT +GTPFWMAPEVI++ YD AD+WSLGITA+E+A G+PP
Sbjct: 164 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
+ ++HPM+ +F+IP PP+ ++ +FV CL K P R TA E+L H+FI R
Sbjct: 224 HSELHPMKVLFLIPKNNPPTLE--GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 281
Query: 241 H 241
+
Sbjct: 282 N 282
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 239 bits (611), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/246 (49%), Positives = 152/246 (61%), Gaps = 37/246 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ QCDS YV KYYGSY K + LWI+MEY G GS D+ LR E +IAT+L + LKG
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDL--LRAGPFDEFQIATMLKEILKG 132
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH +KIHRDIKA N+LL+ +G
Sbjct: 133 LDYLHSEKKIHRDIKAA---------------------------------NVLLSEQGDV 159
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KLADFGVAGQLTDT KRNT +GTPFWMAPEVIQ+ YD AD+WSLGITA+E+A+G+PP
Sbjct: 160 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
D+HPMR +F+IP PP+ +T F +F+ CL K+P R TA E+L H+FI +
Sbjct: 220 NSDMHPMRVLFLIPKNNPPTLVGD--FTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVK 277
Query: 241 HDTDPS 246
+ S
Sbjct: 278 NSKKTS 283
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 239 bits (611), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 150/241 (62%), Gaps = 37/241 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ QCDSPYV KYYGSY K+T LWI+MEY G GS D+ L L E +IATIL + LKG
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL--LEPGPLDETQIATILREILKG 116
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH +KIHRDIKA N+LL+ G
Sbjct: 117 LDYLHSEKKIHRDIKAA---------------------------------NVLLSEHGEV 143
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KLADFGVAGQLTDT KRNT +GTPFWMAPEVI++ YD AD+WSLGITA+E+A G+PP
Sbjct: 144 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
+ ++HPM+ +F+IP PP+ ++ +FV CL K P R TA E+L H+FI R
Sbjct: 204 HSELHPMKVLFLIPKNNPPTLE--GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
Query: 241 H 241
+
Sbjct: 262 N 262
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 239 bits (609), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/246 (49%), Positives = 152/246 (61%), Gaps = 37/246 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ QCDSPY+ +Y+GSY K+T LWI+MEY G GS D+ L+ L E IATIL + LKG
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDL--LKPGPLEETYIATILREILKG 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH RKIHRDIKA N+LL+ +G
Sbjct: 129 LDYLHSERKIHRDIKAA---------------------------------NVLLSEQGDV 155
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KLADFGVAGQLTDT KRN +GTPFWMAPEVI++ YD AD+WSLGITA+E+A+G+PP
Sbjct: 156 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
D+HPMR +F+IP PP+ + F +FV CL K+P R TA E+L H+FI R
Sbjct: 216 NSDLHPMRVLFLIPKNSPPTLEGQH--SKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 273
Query: 241 HDTDPS 246
+ S
Sbjct: 274 YTKKTS 279
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 238 bits (606), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 149/241 (61%), Gaps = 37/241 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ QCDSPYV KYYGSY K+T LWI+MEY G GS D+ L L E +IATIL + LKG
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL--LEPGPLDETQIATILREILKG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH +KIHRDIKA N+LL+ G
Sbjct: 132 LDYLHSEKKIHRDIKAA---------------------------------NVLLSEHGEV 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KLADFGVAGQLTDT KRN +GTPFWMAPEVI++ YD AD+WSLGITA+E+A G+PP
Sbjct: 159 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
+ ++HPM+ +F+IP PP+ ++ +FV CL K P R TA E+L H+FI R
Sbjct: 219 HSELHPMKVLFLIPKNNPPTLE--GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276
Query: 241 H 241
+
Sbjct: 277 N 277
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 238 bits (606), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 149/241 (61%), Gaps = 37/241 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ QCDSPYV KYYGSY K+T LWI+MEY G GS D+ L L E +IATIL + LKG
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL--LEPGPLDETQIATILREILKG 116
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH +KIHRDIKA N+LL+ G
Sbjct: 117 LDYLHSEKKIHRDIKAA---------------------------------NVLLSEHGEV 143
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KLADFGVAGQLTDT KRN +GTPFWMAPEVI++ YD AD+WSLGITA+E+A G+PP
Sbjct: 144 KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
+ ++HPM+ +F+IP PP+ ++ +FV CL K P R TA E+L H+FI R
Sbjct: 204 HSELHPMKVLFLIPKNNPPTLE--GNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
Query: 241 H 241
+
Sbjct: 262 N 262
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 190 bits (482), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 136/243 (55%), Gaps = 46/243 (18%)
Query: 9 VVKYYGSYFK------NTDLWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGL 61
+ YYG++ K + LW+VME+CGAGSV+D+++ K TL E+ IA I + L+GL
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
+LH + IHRDIK N+LL K
Sbjct: 143 SHLHQHKVIHRDIKGQ---------------------------------NVLLTENAEVK 169
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADMWSLGITALEMAE 176
L DFGV+ QL T+ +RNT IGTP+WMAPEVI + YD +D+WSLGITA+EMAE
Sbjct: 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE 229
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHE 236
G PP D+HPMRA+F+IP P P + W+ +F F+ CLVKN +R +++ H
Sbjct: 230 GAPPLCDMHPMRALFLIPRNPAPRLKSKK-WSKKFQSFIESCLVKNHSQRPATEQLMKHP 288
Query: 237 FIQ 239
FI+
Sbjct: 289 FIR 291
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 138/243 (56%), Gaps = 38/243 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ CD PY+VK G+Y+ + LWI++E+C G+V IM + L+E +I + L+
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L +LH +R IHRD LKAGN+L+ EG
Sbjct: 130 LNFLHSKRIIHRD---------------------------------LKAGNVLMTLEGDI 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMWSLGITALEMA 175
+LADFGV+ + T+ KR++ IGTP+WMAPEV+ ++ YD AD+WSLGIT +EMA
Sbjct: 157 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ +PP+ +++PMR + I PP+ P W+ EF DF+ L KNPE R +A+++L H
Sbjct: 217 QIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276
Query: 236 EFI 238
F+
Sbjct: 277 PFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 187 bits (474), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 138/243 (56%), Gaps = 38/243 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ CD PY+VK G+Y+ + LWI++E+C G+V IM + L+E +I + L+
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 121
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L +LH +R IHRD LKAGN+L+ EG
Sbjct: 122 LNFLHSKRIIHRD---------------------------------LKAGNVLMTLEGDI 148
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMWSLGITALEMA 175
+LADFGV+ + T+ KR++ IGTP+WMAPEV+ ++ YD AD+WSLGIT +EMA
Sbjct: 149 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ +PP+ +++PMR + I PP+ P W+ EF DF+ L KNPE R +A+++L H
Sbjct: 209 QIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 268
Query: 236 EFI 238
F+
Sbjct: 269 PFV 271
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 184 bits (468), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 137/250 (54%), Gaps = 38/250 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ CD P +VK +++ +LWI++E+C G+V +M ++ L+E +I + TL
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YLH + IHRD LKAGNIL +G
Sbjct: 148 LNYLHDNKIIHRD---------------------------------LKAGNILFTLDGDI 174
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMWSLGITALEMA 175
KLADFGV+ + T T+ +R++ IGTP+WMAPEV+ ++ YD AD+WSLGIT +EMA
Sbjct: 175 KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
E +PP+ +++PMR + I PP+ +P W+ F DF+ +CL KN + R T S++L H
Sbjct: 235 EIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 294
Query: 236 EFIQRHDTDP 245
F+ P
Sbjct: 295 PFVTVDSNKP 304
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 136/250 (54%), Gaps = 38/250 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ CD P +VK +++ +LWI++E+C G+V +M ++ L+E +I + TL
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YLH + IHRD LKAGNIL +G
Sbjct: 148 LNYLHDNKIIHRD---------------------------------LKAGNILFTLDGDI 174
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMWSLGITALEMA 175
KLADFGV+ + T + +R++ IGTP+WMAPEV+ ++ YD AD+WSLGIT +EMA
Sbjct: 175 KLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
E +PP+ +++PMR + I PP+ +P W+ F DF+ +CL KN + R T S++L H
Sbjct: 235 EIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 294
Query: 236 EFIQRHDTDP 245
F+ P
Sbjct: 295 PFVTVDSNKP 304
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 135/250 (54%), Gaps = 38/250 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ CD P +VK +++ +LWI++E+C G+V +M ++ L+E +I + TL
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YLH + IHRD LKAGNIL +G
Sbjct: 148 LNYLHDNKIIHRD---------------------------------LKAGNILFTLDGDI 174
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMWSLGITALEMA 175
KLADFGV+ + T + +R+ IGTP+WMAPEV+ ++ YD AD+WSLGIT +EMA
Sbjct: 175 KLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
E +PP+ +++PMR + I PP+ +P W+ F DF+ +CL KN + R T S++L H
Sbjct: 235 EIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 294
Query: 236 EFIQRHDTDP 245
F+ P
Sbjct: 295 PFVTVDSNKP 304
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 180 bits (456), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 137/251 (54%), Gaps = 39/251 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ CD P +VK +++ +LWI++E+C G+V +M ++ L+E +I + TL
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 120
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YLH + IHRD LKAGNIL +G
Sbjct: 121 LNYLHDNKIIHRD---------------------------------LKAGNILFTLDGDI 147
Query: 121 KLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMWSLGITALEM 174
KLADFGV+ + T T + +R++ IGTP+WMAPEV+ ++ YD AD+WSLGIT +EM
Sbjct: 148 KLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
AE +PP+ +++PMR + I PP+ +P W+ F DF+ +CL KN + R T S++L
Sbjct: 208 AEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 267
Query: 235 HEFIQRHDTDP 245
H F+ P
Sbjct: 268 HPFVTVDSNKP 278
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 136/239 (56%), Gaps = 35/239 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M++ +P +V Y SY +LW+VMEY GS++D+ + + + E +IA + + L+
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LE+LH + IHRDIK+ NILL +G
Sbjct: 129 LEFLHSNQVIHRDIKSD---------------------------------NILLGMDGSV 155
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG Q+T +KR+T++GTP+WMAPEV+ Y D+WSLGI A+EM EG+PP
Sbjct: 156 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
Y + +P+RA+++I T P + P+ + F DF++RCL + E+R +A E+L H+F++
Sbjct: 216 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 177 bits (448), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 135/239 (56%), Gaps = 35/239 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M++ +P +V Y SY +LW+VMEY GS++D+ + + + E +IA + + L+
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LE+LH + IHRDIK+ NILL +G
Sbjct: 129 LEFLHSNQVIHRDIKSD---------------------------------NILLGMDGSV 155
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG Q+T +KR+ ++GTP+WMAPEV+ Y D+WSLGI A+EM EG+PP
Sbjct: 156 KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
Y + +P+RA+++I T P + P+ + F DF++RCL + E+R +A E+L H+F++
Sbjct: 216 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 135/239 (56%), Gaps = 35/239 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M++ +P +V Y SY +LW+VMEY GS++D+ + + + E +IA + + L+
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LE+LH + IHRDIK+ NILL +G
Sbjct: 129 LEFLHSNQVIHRDIKSD---------------------------------NILLGMDGSV 155
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG Q+T +KR+ ++GTP+WMAPEV+ Y D+WSLGI A+EM EG+PP
Sbjct: 156 KLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
Y + +P+RA+++I T P + P+ + F DF++RCL + E+R +A E+L H+F++
Sbjct: 216 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 136/239 (56%), Gaps = 35/239 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M++ +P +V Y SY +LW+VMEY GS++D+ + + + E +IA + + L+
Sbjct: 72 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQA 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LE+LH + IHR+IK+ NILL +G
Sbjct: 130 LEFLHSNQVIHRNIKSD---------------------------------NILLGMDGSV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG Q+T +KR+T++GTP+WMAPEV+ Y D+WSLGI A+EM EG+PP
Sbjct: 157 KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
Y + +P+RA+++I T P + P+ + F DF++RCL + E+R +A E++ H+F++
Sbjct: 217 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 176 bits (445), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 135/239 (56%), Gaps = 35/239 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M++ +P +V Y SY +LW+VMEY GS++D+ + + + E +IA + + L+
Sbjct: 72 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQA 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LE+LH + IHRDIK+ NILL +G
Sbjct: 130 LEFLHSNQVIHRDIKSD---------------------------------NILLGMDGSV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG Q+T +KR+ ++GTP+WMAPEV+ Y D+WSLGI A+EM EG+PP
Sbjct: 157 KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
Y + +P+RA+++I T P + P+ + F DF++RCL + E+R +A E++ H+F++
Sbjct: 217 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 135/262 (51%), Gaps = 57/262 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRL-------RKKTLSEDEIATI 53
M QC P +V YY S+ +LW+VM+ GSV DI++ + L E IATI
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
L + L+GLEYLH +IHRD+KAG NIL
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAG---------------------------------NIL 153
Query: 114 LNTEGHAKLADFGVA------GQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVADMWS 166
L +G ++ADFGV+ G +T R T +GTP WMAPEV++++ GYD AD+WS
Sbjct: 154 LGEDGSVQIADFGVSAFLATGGDITRNKV-RKTFVGTPCWMAPEVMEQVRGYDFKADIWS 212
Query: 167 LGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPE--------FIDFVSRC 218
GITA+E+A G PY PM+ + + PPS E V E F +S C
Sbjct: 213 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL-ETGVQDKEMLKKYGKSFRKMISLC 271
Query: 219 LVKNPEERATASEMLNHEFIQR 240
L K+PE+R TA+E+L H+F Q+
Sbjct: 272 LQKDPEKRPTAAELLRHKFFQK 293
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 135/262 (51%), Gaps = 57/262 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRL-------RKKTLSEDEIATI 53
M QC P +V YY S+ +LW+VM+ GSV DI++ + L E IATI
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
L + L+GLEYLH +IHRD+KAG NIL
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAG---------------------------------NIL 148
Query: 114 LNTEGHAKLADFGVA------GQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVADMWS 166
L +G ++ADFGV+ G +T R T +GTP WMAPEV++++ GYD AD+WS
Sbjct: 149 LGEDGSVQIADFGVSAFLATGGDITRNKV-RKTFVGTPCWMAPEVMEQVRGYDFKADIWS 207
Query: 167 LGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPE--------FIDFVSRC 218
GITA+E+A G PY PM+ + + PPS E V E F +S C
Sbjct: 208 FGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL-ETGVQDKEMLKKYGKSFRKMISLC 266
Query: 219 LVKNPEERATASEMLNHEFIQR 240
L K+PE+R TA+E+L H+F Q+
Sbjct: 267 LQKDPEKRPTAAELLRHKFFQK 288
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 127/230 (55%), Gaps = 35/230 (15%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
VV+ Y SY +LW++ME+ G+++DI + + L+E++IAT+ L+ L YLH +
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTDI--VSQVRLNEEQIATVCEAVLQALAYLHAQG 161
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRDIK+ S ILL +G KL+DFG
Sbjct: 162 VIHRDIKSDS---------------------------------ILLTLDGRVKLSDFGFC 188
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
Q++ + KR ++GTP+WMAPEVI Y D+WSLGI +EM +G+PPY P++
Sbjct: 189 AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ 248
Query: 189 AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
A+ + PPP + +P DF+ R LV++P+ERATA E+L+H F+
Sbjct: 249 AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 125/243 (51%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q+ P ++Y G Y + W+VMEYC GS SD++ + KK L E EIA + L+G
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YLH IHRD+KAG NILL+ G
Sbjct: 167 LAYLHSHNMIHRDVKAG---------------------------------NILLSEPGLV 193
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSLGITALEMAEG 177
KL DFG A MA N +GTP+WMAPEVI E YD D+WSLGIT +E+AE
Sbjct: 194 KLGDFGSAS----IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 249
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
KPP +++ M A++ I P+ + W+ F +FV CL K P++R T+ +L H F
Sbjct: 250 KPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308
Query: 238 IQR 240
+ R
Sbjct: 309 VLR 311
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 125/243 (51%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q+ P ++Y G Y + W+VMEYC GS SD++ + KK L E EIA + L+G
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YLH IHRD+KAG NILL+ G
Sbjct: 128 LAYLHSHNMIHRDVKAG---------------------------------NILLSEPGLV 154
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSLGITALEMAEG 177
KL DFG A MA N +GTP+WMAPEVI E YD D+WSLGIT +E+AE
Sbjct: 155 KLGDFGSAS----IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 210
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
KPP +++ M A++ I P+ + W+ F +FV CL K P++R T+ +L H F
Sbjct: 211 KPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269
Query: 238 IQR 240
+ R
Sbjct: 270 VLR 272
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 35/232 (15%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
VV+ Y SY +LW+VME+ G+++DI + ++E++IA + L+ L LH +
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRDIK+ S ILL +G KL+DFG
Sbjct: 146 VIHRDIKSDS---------------------------------ILLTHDGRVKLSDFGFC 172
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
Q++ + +R ++GTP+WMAPE+I + Y D+WSLGI +EM +G+PPY + P++
Sbjct: 173 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 232
Query: 189 AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
A+ MI PP + +P F+ R LV++P +RATA+E+L H F+ +
Sbjct: 233 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 284
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 35/232 (15%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
VV+ Y SY +LW+VME+ G+++DI + ++E++IA + L+ L LH +
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRDIK+ S ILL +G KL+DFG
Sbjct: 137 VIHRDIKSDS---------------------------------ILLTHDGRVKLSDFGFC 163
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
Q++ + +R ++GTP+WMAPE+I + Y D+WSLGI +EM +G+PPY + P++
Sbjct: 164 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 223
Query: 189 AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
A+ MI PP + +P F+ R LV++P +RATA+E+L H F+ +
Sbjct: 224 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 35/232 (15%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
VV+ Y SY +LW+VME+ G+++DI + ++E++IA + L+ L LH +
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRDIK+ S ILL +G KL+DFG
Sbjct: 148 VIHRDIKSDS---------------------------------ILLTHDGRVKLSDFGFC 174
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
Q++ + +R ++GTP+WMAPE+I + Y D+WSLGI +EM +G+PPY + P++
Sbjct: 175 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 234
Query: 189 AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
A+ MI PP + +P F+ R LV++P +RATA+E+L H F+ +
Sbjct: 235 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 286
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 35/232 (15%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
VV+ Y SY +LW+VME+ G+++DI + ++E++IA + L+ L LH +
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRDIK+ S ILL +G KL+DFG
Sbjct: 141 VIHRDIKSDS---------------------------------ILLTHDGRVKLSDFGFC 167
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
Q++ + +R ++GTP+WMAPE+I + Y D+WSLGI +EM +G+PPY + P++
Sbjct: 168 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 227
Query: 189 AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
A+ MI PP + +P F+ R LV++P +RATA+E+L H F+ +
Sbjct: 228 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 279
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 125/232 (53%), Gaps = 35/232 (15%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
VV+ Y SY +LW+VME+ G+++DI + ++E++IA + L+ L LH +
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRDIK+ S ILL +G KL+DFG
Sbjct: 191 VIHRDIKSDS---------------------------------ILLTHDGRVKLSDFGFC 217
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
Q++ + +R ++GTP+WMAPE+I + Y D+WSLGI +EM +G+PPY + P++
Sbjct: 218 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 277
Query: 189 AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
A+ MI PP + +P F+ R LV++P +RATA+E+L H F+ +
Sbjct: 278 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 126/232 (54%), Gaps = 35/232 (15%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
VV+ Y SY +LW+VME+ G+++DI+ + ++E++IA + L+ L LH +
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG 267
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRDIK+ S ILL +G KL+DFG
Sbjct: 268 VIHRDIKSDS---------------------------------ILLTHDGRVKLSDFGFC 294
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
Q++ + +R ++GTP+WMAPE+I + Y D+WSLGI +EM +G+PPY + P++
Sbjct: 295 AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK 354
Query: 189 AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
A+ MI PP + +P F+ R LV++P +RATA+E+L H F+ +
Sbjct: 355 AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 406
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 135/249 (54%), Gaps = 42/249 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 135
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 136 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 162
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFGV+GQL D+MA N+ +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 163 IKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 220
Query: 180 PYGDIHPMRAIF----MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
P G AIF I +PPP V++ EF DFV++CL+KNP ERA +++ H
Sbjct: 221 PIGSGSGSMAIFELLDYIVNEPPPKL-PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 279
Query: 236 EFIQRHDTD 244
FI+R D +
Sbjct: 280 AFIKRSDAE 288
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 123/231 (53%), Gaps = 35/231 (15%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
VV Y SY +LW+VME+ G+++DI + ++E++IAT+ L+ L YLH +
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDI--VTHTRMNEEQIATVCLSVLRALSYLHNQG 161
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRDIK+ S ILL ++G KL+DFG
Sbjct: 162 VIHRDIKSDS---------------------------------ILLTSDGRIKLSDFGFC 188
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
Q++ + KR ++GTP+WMAPEVI + Y D+WSLGI +EM +G+PPY + P++
Sbjct: 189 AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ 248
Query: 189 AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
A+ I PP ++ + F+ LV+ P +RATA E+L H F++
Sbjct: 249 AMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLK 299
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 137/255 (53%), Gaps = 48/255 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 116
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 117 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK- 178
KL DFGV+GQL D+MA N+ +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 144 IKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 179 ---PPYG--DIHPMRAIF----MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 229
PP D P AIF I +PPP V++ EF DFV++CL+KNP ERA
Sbjct: 202 PIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPS-GVFSLEFQDFVNKCLIKNPAERADL 260
Query: 230 SEMLNHEFIQRHDTD 244
+++ H FI+R D +
Sbjct: 261 KQLMVHAFIKRSDAE 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 133/249 (53%), Gaps = 46/249 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 119
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 120 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 146
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFGV+GQL D MA N +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 147 IKLCDFGVSGQLIDEMA--NEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 204
Query: 180 PYGDIHPMRAIF----MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
P P AIF I +PPP V++ EF DFV++CL+KNP ERA +++ H
Sbjct: 205 P----RPPMAIFELLDYIVNEPPPKLPSA-VFSLEFQDFVNKCLIKNPAERADLKQLMVH 259
Query: 236 EFIQRHDTD 244
FI+R D +
Sbjct: 260 AFIKRSDAE 268
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 139/287 (48%), Gaps = 80/287 (27%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 120 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 178
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 179 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 205
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK- 178
KL DFGV+GQL D+MA N+ +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 206 IKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 263
Query: 179 --PP----------------------------------YG-DIHPMRAIF----MIPTKP 197
PP YG D P AIF I +P
Sbjct: 264 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP 323
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTD 244
PP V++ EF DFV++CL+KNP ERA +++ H FI+R D +
Sbjct: 324 PPKLPSA-VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 369
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 80/287 (27%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 116
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 117 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFGV+GQL D+MA N+ +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 144 IKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 180 P-------------------------------------YG-DIHPMRAIF----MIPTKP 197
P YG D P AIF I +P
Sbjct: 202 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP 261
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTD 244
PP V++ EF DFV++CL+KNP ERA +++ H FI+R D +
Sbjct: 262 PPKLPS-GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 307
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 80/287 (27%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 116
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 117 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFGV+GQL D+MA N+ +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 144 IKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 180 P-------------------------------------YG-DIHPMRAIF----MIPTKP 197
P YG D P AIF I +P
Sbjct: 202 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP 261
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTD 244
PP V++ EF DFV++CL+KNP ERA +++ H FI+R D +
Sbjct: 262 PPKLPS-GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 307
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 80/287 (27%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 116
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 117 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFGV+GQL D+MA N+ +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 144 IKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 180 P-------------------------------------YG-DIHPMRAIF----MIPTKP 197
P YG D P AIF I +P
Sbjct: 202 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP 261
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTD 244
PP V++ EF DFV++CL+KNP ERA +++ H FI+R D +
Sbjct: 262 PPKLPS-GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 307
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 138/287 (48%), Gaps = 80/287 (27%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 116
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 117 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFGV+GQL D+MA N+ +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 144 IKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 180 P-------------------------------------YG-DIHPMRAIF----MIPTKP 197
P YG D P AIF I +P
Sbjct: 202 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP 261
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTD 244
PP V++ EF DFV++CL+KNP ERA +++ H FI+R D +
Sbjct: 262 PPKLPS-GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 307
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 140/291 (48%), Gaps = 84/291 (28%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ K + E+ + + L+G
Sbjct: 68 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-EAKRIPEEILGKVSIAVLRG 126
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + +I HRD+K NIL+N+ G
Sbjct: 127 LAYLREKHQIMHRDVKPS---------------------------------NILVNSRGE 153
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK- 178
KL DFGV+GQL D+MA N+ +GT +MAPE +Q Y +D+WS+G++ +E+A G+
Sbjct: 154 IKLCDFGVSGQLIDSMA--NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRY 211
Query: 179 --PP---------YG------------------------------DIHPMRAIF----MI 193
PP +G D P AIF I
Sbjct: 212 PIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYI 271
Query: 194 PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTD 244
+PPP V+TP+F +FV++CL+KNP ERA + NH FI+R + +
Sbjct: 272 VNEPPPKLPN-GVFTPDFQEFVNKCLIKNPAERADLKMLTNHTFIKRSEVE 321
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 80/287 (27%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ +C+SPY+V +YG+++ + ++ I ME+ GS+ +++ + + E + + +KG
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKG 143
Query: 61 LEYLHLRRKI-HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + KI HRD+K NIL+N+ G
Sbjct: 144 LTYLREKHKIMHRDVKPS---------------------------------NILVNSRGE 170
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFGV+GQL D+MA N+ +GT +M+PE +Q Y +D+WS+G++ +EMA G+
Sbjct: 171 IKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 228
Query: 180 P------------YG--------------------------DIHPMRAIF----MIPTKP 197
P +G D P AIF I +P
Sbjct: 229 PIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP 288
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTD 244
PP V++ EF DFV++CL+KNP ERA +++ H FI+R D +
Sbjct: 289 PPKL-PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE 334
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 45/252 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRL---RKKTLSEDEIATILCDT 57
M+ D P+ V +YG+ F+ D+WI ME S+ + + +T+ ED + I
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 58 LKGLEYLHLRRK-IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
+K LE+LH + IHRD+K N+L+N
Sbjct: 163 VKALEHLHSKLSVIHRDVKPS---------------------------------NVLINA 189
Query: 117 EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ----EIGYDCVADMWSLGITAL 172
G K+ DFG++G L D++AK P+ MAPE I + GY +D+WSLGIT +
Sbjct: 190 LGQVKMCDFGISGYLVDSVAKTIDAGCKPY-MAPERINPELNQKGYSVKSDIWSLGITMI 248
Query: 173 EMAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 231
E+A + PY P + + + +P P D ++ EF+DF S+CL KN +ER T E
Sbjct: 249 ELAILRFPYDSWGTPFQQLKQVVEEPSPQL-PADKFSAEFVDFTSQCLKKNSKERPTYPE 307
Query: 232 MLNHEFIQRHDT 243
++ H F H++
Sbjct: 308 LMQHPFFTLHES 319
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 45/252 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRL---RKKTLSEDEIATILCDT 57
M+ D P+ V +YG+ F+ D+WI ME S+ + + +T+ ED + I
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 58 LKGLEYLHLRRK-IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
+K LE+LH + IHRD+K N+L+N
Sbjct: 119 VKALEHLHSKLSVIHRDVKPS---------------------------------NVLINA 145
Query: 117 EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ----EIGYDCVADMWSLGITAL 172
G K+ DFG++G L D +AK + G +MAPE I + GY +D+WSLGIT +
Sbjct: 146 LGQVKMCDFGISGYLVDDVAK-DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 204
Query: 173 EMAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 231
E+A + PY P + + + +P P D ++ EF+DF S+CL KN +ER T E
Sbjct: 205 ELAILRFPYDSWGTPFQQLKQVVEEPSPQL-PADKFSAEFVDFTSQCLKKNSKERPTYPE 263
Query: 232 MLNHEFIQRHDT 243
++ H F H++
Sbjct: 264 LMQHPFFTLHES 275
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 117/249 (46%), Gaps = 45/249 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAG---SVSDIMRLRKKTLSEDEIATILCDT 57
M+ D PY+V++YG+ F+ D WI ME + + + E+ + I T
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 58 LKGLEYLHLRRK-IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
+K L +L K IHRDI K NILL+
Sbjct: 135 VKALNHLKENLKIIHRDI---------------------------------KPSNILLDR 161
Query: 117 EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI----QEIGYDCVADMWSLGITAL 172
G+ KL DFG++GQL D++AK P+ MAPE I GYD +D+WSLGIT
Sbjct: 162 SGNIKLCDFGISGQLVDSIAKTRDAGCRPY-MAPERIDPSASRQGYDVRSDVWSLGITLY 220
Query: 173 EMAEGKPPYGDIHPM--RAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATA 229
E+A G+ PY + + + ++ PP S E ++P FI+FV+ CL K+ +R
Sbjct: 221 ELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKY 280
Query: 230 SEMLNHEFI 238
E+L H FI
Sbjct: 281 KELLKHPFI 289
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 116/248 (46%), Gaps = 45/248 (18%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRL---RKKTLSEDEIATILCDTLKGL 61
D P+ V +YG+ F+ D+WI E S+ + + +T+ ED + I +K L
Sbjct: 91 DCPFTVTFYGALFREGDVWICXELXDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 149
Query: 62 EYLHLRRK-IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
E+LH + IHRD+K N+L+N G
Sbjct: 150 EHLHSKLSVIHRDVKPS---------------------------------NVLINALGQV 176
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ----EIGYDCVADMWSLGITALEMAE 176
K DFG++G L D +AK + G + APE I + GY +D+WSLGIT +E+A
Sbjct: 177 KXCDFGISGYLVDDVAK-DIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAI 235
Query: 177 GKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ PY P + + + +P P D ++ EF+DF S+CL KN +ER T E+ H
Sbjct: 236 LRFPYDSWGTPFQQLKQVVEEPSPQL-PADKFSAEFVDFTSQCLKKNSKERPTYPELXQH 294
Query: 236 EFIQRHDT 243
F H++
Sbjct: 295 PFFTLHES 302
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 42/238 (17%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDE--IATILCDTLKGLEYLHL 66
+V+Y GS+ +N + I ME GS+S ++R + L ++E I L+GL+YLH
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT-EGHAKLADF 125
+ +HRDIK N+L+NT G K++DF
Sbjct: 141 NQIVHRDIKGD---------------------------------NVLINTYSGVLKISDF 167
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--IGYDCVADMWSLGITALEMAEGKPPYGD 183
G + +L T GT +MAPE+I + GY AD+WSLG T +EMA GKPP+ +
Sbjct: 168 GTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227
Query: 184 I-HPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
+ P A+F + K P P+ + E F+ +C +P++RA A+++L EF++
Sbjct: 228 LGEPQAAMFKVGMFKVHPEI--PESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 119/238 (50%), Gaps = 42/238 (17%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDE--IATILCDTLKGLEYLHL 66
+V+Y GS+ +N + I ME GS+S ++R + L ++E I L+GL+YLH
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT-EGHAKLADF 125
+ +HRDIK N+L+NT G K++DF
Sbjct: 127 NQIVHRDIKGD---------------------------------NVLINTYSGVLKISDF 153
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--IGYDCVADMWSLGITALEMAEGKPPYGD 183
G + +L T GT +MAPE+I + GY AD+WSLG T +EMA GKPP+ +
Sbjct: 154 GTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 213
Query: 184 I-HPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
+ P A+F + K P P+ + E F+ +C +P++RA A+++L EF++
Sbjct: 214 LGEPQAAMFKVGMFKVHPEI--PESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 42/250 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++ D PY+V+ +G++ NTD++I ME G + + + + E + + +K
Sbjct: 78 LKSHDCPYIVQCFGTFITNTDVFIAMELMGT-CAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 61 LEYLHLRRK-IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L YL + IHRD+K NILL+ G
Sbjct: 137 LYYLKEKHGVIHRDVKPS---------------------------------NILLDERGQ 163
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADMWSLGITALEM 174
KL DFG++G+L D AK + G +MAPE I + YD AD+WSLGI+ +E+
Sbjct: 164 IKLCDFGISGRLVDDKAKDRSA-GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222
Query: 175 AEGKPPYGDIHP-MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
A G+ PY + + + + PP ++ +F FV CL K+ +R +++L
Sbjct: 223 ATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
Query: 234 NHEFIQRHDT 243
H FI+R++T
Sbjct: 283 EHSFIKRYET 292
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 45/234 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR---LRKKTLSEDEIATILCDT 57
++Q + P V+KYY S+ ++ +L IV+E AG +S +++ +K+ + E +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
LE++H RR +HRDIK N+ +
Sbjct: 146 CSALEHMHSRRVMHRDIKPA---------------------------------NVFITAT 172
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
G KL D G+ + ++++GTP++M+PE I E GY+ +D+WSLG EMA
Sbjct: 173 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 232
Query: 178 KPP-YGDIHPM----RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
+ P YGD + + I P PS D ++ E V+ C+ +PE+R
Sbjct: 233 QSPFYGDKMNLYSLCKKIEQCDYPPLPS----DHYSEELRQLVNMCINPDPEKR 282
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 37/237 (15%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
+ D+P+VV ++G + + +++V+E C S+ ++ + R+K ++E E + T++G+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK-RRKAVTEPEARYFMRQTIQGV 155
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
+YLH R IHRD LK GN+ LN + K
Sbjct: 156 QYLHNNRVIHRD---------------------------------LKLGNLFLNDDMDVK 182
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
+ DFG+A ++ ++ T+ GTP ++APEV+ + G+ D+WSLG + GKPP+
Sbjct: 183 IGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ ++ K + P P + R L +P R + +E+L EF
Sbjct: 243 -ETSCLKETYIRIKK--NEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%), Gaps = 41/246 (16%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 126
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 127 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 153
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + +R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 154 GWSCHAPSS--RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 210
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 211 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
Query: 246 SQNGGK 251
S + K
Sbjct: 269 SNSQNK 274
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
+VV ++G + N +++V+E C S+ ++ + R+K L+E E L + G +YLH
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
R IHRD LK GN+ LN + K+ DFG+
Sbjct: 137 RVIHRD---------------------------------LKLGNLFLNEDLEVKIGDFGL 163
Query: 128 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
A ++ ++ T+ GTP ++APEV+ + G+ D+WS+G + GKPP+ + +
Sbjct: 164 ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCL 222
Query: 188 RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ K + P P + + L +P R T +E+LN EF
Sbjct: 223 KETYLRIKK--NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
+VV ++G + N +++V+E C S+ ++ + R+K L+E E L + G +YLH
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
R IHRD LK GN+ LN + K+ DFG+
Sbjct: 137 RVIHRD---------------------------------LKLGNLFLNEDLEVKIGDFGL 163
Query: 128 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
A ++ ++ T+ GTP ++APEV+ + G+ D+WS+G + GKPP+ + +
Sbjct: 164 ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCL 222
Query: 188 RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ K + P P + + L +P R T +E+LN EF
Sbjct: 223 KETYLRIKK--NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 37/237 (15%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
+ D+P+VV ++G + + +++V+E C S+ ++ + R+K ++E E + T++G+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK-RRKAVTEPEARYFMRQTIQGV 155
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
+YLH R IHRD LK GN+ LN + K
Sbjct: 156 QYLHNNRVIHRD---------------------------------LKLGNLFLNDDMDVK 182
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
+ DFG+A ++ ++ + GTP ++APEV+ + G+ D+WSLG + GKPP+
Sbjct: 183 IGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ ++ K + P P + R L +P R + +E+L EF
Sbjct: 243 -ETSCLKETYIRIKK--NEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
+VV ++G + N +++V+E C S+ ++ + R+K L+E E L + G +YLH
Sbjct: 82 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRN 140
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
R IHRD LK GN+ LN + K+ DFG+
Sbjct: 141 RVIHRD---------------------------------LKLGNLFLNEDLEVKIGDFGL 167
Query: 128 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
A ++ ++ T+ GTP ++APEV+ + G+ D+WS+G + GKPP+ + +
Sbjct: 168 ATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCL 226
Query: 188 RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ K + P P + + L +P R T +E+LN EF
Sbjct: 227 KETYLRIKK--NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 37/237 (15%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
+ D+P+VV ++G + + +++V+E C S+ ++ + R+K ++E E + T++G+
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK-RRKAVTEPEARYFMRQTIQGV 139
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
+YLH R IHRD LK GN+ LN + K
Sbjct: 140 QYLHNNRVIHRD---------------------------------LKLGNLFLNDDMDVK 166
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
+ DFG+A ++ ++ + GTP ++APEV+ + G+ D+WSLG + GKPP+
Sbjct: 167 IGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ ++ K + P P + R L +P R + +E+L EF
Sbjct: 227 -ETSCLKETYIRIKK--NEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 280
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L + E AT + + L Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCH 129
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 130 SKRVIHRDIKPE---------------------------------NLLLGSNGELKIADF 156
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R+T+ GT ++ PE+I+ +D D+WSLG+ E G PP+ + H
Sbjct: 157 GWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-EAH 213
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L N +R T +E+L H +I+ + + P
Sbjct: 214 TYQETYRRISRVEFTF--PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
Query: 246 S 246
S
Sbjct: 272 S 272
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 126
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 127 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 153
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R+T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 154 GWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 210
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 211 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
Query: 246 S 246
S
Sbjct: 269 S 269
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 37/237 (15%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
+ D+P+VV ++G + + +++V+E C S+ ++ + R+K ++E E + T++G+
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHK-RRKAVTEPEARYFMRQTIQGV 155
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
+YLH R IHRD LK GN+ LN + K
Sbjct: 156 QYLHNNRVIHRD---------------------------------LKLGNLFLNDDMDVK 182
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
+ DFG+A ++ ++ + GTP ++APEV+ + G+ D+WSLG + GKPP+
Sbjct: 183 IGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ ++ K + P P + R L +P R + +E+L EF
Sbjct: 243 -ETSCLKETYIRIKK--NEYSVPRHINPVASALIRRMLHADPTLRPSVAELLTDEFF 296
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 38/249 (15%)
Query: 3 QCDSPYVVKYYGSYFKNTD-LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
Q P +++ Y +YF++++ +++V+E C G ++ ++ R K SE+E + + G+
Sbjct: 67 QLKHPSILELY-NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
YLH +HRD L N+LL + K
Sbjct: 126 LYLHSHGILHRD---------------------------------LTLSNLLLTRNMNIK 152
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
+ADFG+A QL K T+ GTP +++PE+ + +D+WSLG + G+PP+
Sbjct: 153 IADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRH 241
D ++ + + P + E D + + L +NP +R + S +L+H F+ R+
Sbjct: 213 -DTDTVKNT--LNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269
Query: 242 DTDPSQNGG 250
+ S++ G
Sbjct: 270 SSTKSKDEG 278
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 130
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 131 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 157
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 158 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 214
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 215 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
Query: 246 S 246
S
Sbjct: 273 S 273
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L + E AT + + L Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCH 129
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 130 SKRVIHRDIKPE---------------------------------NLLLGSNGELKIADF 156
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E G PP+ + H
Sbjct: 157 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-EAH 213
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L N +R T +E+L H +I+ + + P
Sbjct: 214 TYQETYRRISRVEFTF--PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
Query: 246 S 246
S
Sbjct: 272 S 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 41/245 (16%)
Query: 1 MQQCDSPYVVKYYGSYFK-NTD-LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTL 58
+++ D P VVK N D L++V E G V ++ L K LSED+ D +
Sbjct: 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLI 147
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
KG+EYLH ++ IHRDIK N+L+ +G
Sbjct: 148 KGIEYLHYQKIIHRDIKPS---------------------------------NLLVGEDG 174
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE---IGYDCVADMWSLGITALEMA 175
H K+ADFGV+ + + A + +GTP +MAPE + E I D+W++G+T
Sbjct: 175 HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV 234
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
G+ P+ D M I ++ +PD+ + D ++R L KNPE R E+ H
Sbjct: 235 FGQCPFMDERIMCLHSKIKSQALEFPDQPDI-AEDLKDLITRMLDKNPESRIVVPEIKLH 293
Query: 236 EFIQR 240
++ R
Sbjct: 294 PWVTR 298
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 128
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 129 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 155
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 156 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 212
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 213 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
Query: 246 S 246
S
Sbjct: 271 S 271
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 130
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 131 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 157
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 158 GWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF-EAN 214
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 215 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSSKP 272
Query: 246 S 246
S
Sbjct: 273 S 273
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 142
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 143 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 169
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 170 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 226
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 227 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 284
Query: 246 S 246
S
Sbjct: 285 S 285
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G V ++ +L K E AT + + L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCH 130
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 131 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 157
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 158 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 214
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 215 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
Query: 246 S 246
S
Sbjct: 273 S 273
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 125
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 126 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 152
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 153 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 209
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 210 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 246 S 246
S
Sbjct: 268 S 268
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 151
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 152 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 178
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 179 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 235
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 236 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
Query: 246 S 246
S
Sbjct: 294 S 294
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 124
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 125 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 151
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 152 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 208
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 209 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 266
Query: 246 S 246
S
Sbjct: 267 S 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 129
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 130 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 156
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 157 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 213
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 214 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 271
Query: 246 S 246
S
Sbjct: 272 S 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 37/231 (16%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
+VV ++G + N +++V+E C S+ ++ + R+K L+E E L + G +YLH
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
R IHRD LK GN+ LN + K+ DFG+
Sbjct: 135 RVIHRD---------------------------------LKLGNLFLNEDLEVKIGDFGL 161
Query: 128 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
A ++ ++ + GTP ++APEV+ + G+ D+WS+G + GKPP+ + +
Sbjct: 162 ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCL 220
Query: 188 RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ K S P P + + L +P R T +E+LN EF
Sbjct: 221 KETYLRIKKNEYSI--PKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 37/231 (16%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
+VV ++G + N +++V+E C S+ ++ + R+K L+E E L + G +YLH
Sbjct: 100 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRN 158
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
R IHRD LK GN+ LN + K+ DFG+
Sbjct: 159 RVIHRD---------------------------------LKLGNLFLNEDLEVKIGDFGL 185
Query: 128 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
A ++ ++ + GTP ++APEV+ + G+ D+WS+G + GKPP+ + +
Sbjct: 186 ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCL 244
Query: 188 RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ K + P P + + L +P R T +E+LN EF
Sbjct: 245 KETYLRIKK--NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 37/231 (16%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
+VV ++G + N +++V+E C S+ ++ + R+K L+E E L + G +YLH
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
R IHRD LK GN+ LN + K+ DFG+
Sbjct: 161 RVIHRD---------------------------------LKLGNLFLNEDLEVKIGDFGL 187
Query: 128 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
A ++ ++ + GTP ++APEV+ + G+ D+WS+G + GKPP+ + +
Sbjct: 188 ATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCL 246
Query: 188 RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ ++ K + P P + + L +P R T +E+LN EF
Sbjct: 247 KETYLRIKK--NEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 127
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+A+F
Sbjct: 128 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIANF 154
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 155 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 211
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 212 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
Query: 246 S 246
S
Sbjct: 270 S 270
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 128
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+A+F
Sbjct: 129 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIANF 155
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 156 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 212
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 213 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
Query: 246 S 246
S
Sbjct: 271 S 271
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 128
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 129 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 155
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 156 GWS--VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 212
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 213 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
Query: 246 S 246
S
Sbjct: 271 S 271
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 127
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 128 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 154
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 155 GWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 211
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 212 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 269
Query: 246 S 246
S
Sbjct: 270 S 270
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 151
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 152 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 178
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R+ + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 179 GWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 235
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 236 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 293
Query: 246 S 246
S
Sbjct: 294 S 294
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 125
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 126 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 152
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 153 GWS--VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 209
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 210 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 246 S 246
S
Sbjct: 268 S 268
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 40/238 (16%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTL-SEDEIATILCDTLKGLEYLH 65
P +V+Y S+ +N L+IVM+YC G + + +K L ED+I L+++H
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
R+ +HRDI K+ NI L +G +L DF
Sbjct: 143 DRKILHRDI---------------------------------KSQNIFLTKDGTVQLGDF 169
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY--GD 183
G+A L T+ IGTP++++PE+ + Y+ +D+W+LG E+ K + G
Sbjct: 170 GIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRH 241
+ + + + PP S ++ + VS+ +NP +R + + +L FI +
Sbjct: 230 MKNLVLKIISGSFPPVSLH----YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 128
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 129 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 155
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R+ + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 156 GWS--VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 212
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 213 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 270
Query: 246 S 246
S
Sbjct: 271 S 271
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 130
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 131 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 157
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 158 GWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 214
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 215 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
Query: 246 S 246
S
Sbjct: 273 S 273
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G V ++ +L K E AT + + L Y H
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCH 130
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 131 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 157
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 158 GWS--VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 214
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 215 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 272
Query: 246 S 246
S
Sbjct: 273 S 273
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 126
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 127 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 153
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 154 GWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 210
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 211 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
Query: 246 S 246
S
Sbjct: 269 S 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 41/246 (16%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 125
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 126 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 152
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 153 GWS--VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 209
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 210 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 246 SQNGGK 251
S K
Sbjct: 268 SNCQNK 273
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 125
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 126 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 152
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 153 GWS--VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 209
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 210 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 246 S 246
S
Sbjct: 268 S 268
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 41/246 (16%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 125
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 126 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 152
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + +R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 153 GWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 209
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 210 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 246 SQNGGK 251
S K
Sbjct: 268 SNCQNK 273
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 125
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 126 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 152
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + +R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 153 GWSVHAPSS--RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 209
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 210 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 246 S 246
S
Sbjct: 268 S 268
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 125
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 126 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 152
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 153 GWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 209
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 210 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 246 S 246
S
Sbjct: 268 S 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 41/241 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + +T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 125
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
++ IHRDIK N+LL + G K+ADF
Sbjct: 126 SKKVIHRDIKPE---------------------------------NLLLGSAGELKIADF 152
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + +R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 153 GWSVHAPSS--RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 209
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDP 245
+ + ++ +F PD T D +SR L NP +R E+L H +I + + P
Sbjct: 210 TYQDTYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 246 S 246
S
Sbjct: 268 S 268
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 41/233 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 128
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 129 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 155
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 156 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 212
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ + ++ +F PD T D +SR L NP +R E+L H +I
Sbjct: 213 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 108/233 (46%), Gaps = 41/233 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 122
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 123 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 149
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R T+ GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 150 GWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 206
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ + ++ +F PD T D +SR L NP +R E+L H +I
Sbjct: 207 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 107/243 (44%), Gaps = 44/243 (18%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +++ +Y NT ++V + G + D + K TLSE E I+ L+ + LH
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLEVICALHK 142
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+HRD LK NILL+ + + KL DFG
Sbjct: 143 LNIVHRD---------------------------------LKPENILLDDDMNIKLTDFG 169
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVADMWSLGITALEMAEGKPP 180
+ QL D K +V GTP ++APE+I+ GY DMWS G+ + G PP
Sbjct: 170 FSCQL-DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 181 YGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ M + MI + F P D ++ D VSR LV P++R TA E L H F
Sbjct: 229 FWHRKQMLMLRMIMSGNY-QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 239 QRH 241
Q++
Sbjct: 288 QQY 290
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
P +++ YG + T +++++EY G+V ++ +L K E AT + + L Y H
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH 128
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+R IHRDIK N+LL + G K+ADF
Sbjct: 129 SKRVIHRDIKPE---------------------------------NLLLGSAGELKIADF 155
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G + + ++R + GT ++ PE+I+ +D D+WSLG+ E GKPP+ + +
Sbjct: 156 GWS--VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EAN 212
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ + ++ +F PD T D +SR L NP +R E+L H +I
Sbjct: 213 TYQETYKRISRVEFTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 76/284 (26%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEY 63
+ P +V Y ++ + +LW+V + GS D++ ++E IA IL LK L+Y
Sbjct: 84 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK-- 121
+H +HR +KA + D ++Y + R N+ + + G +
Sbjct: 144 IHHMGYVHRSVKASHILISVD-------------GKVYLSGLR---SNLSMISHGQRQRV 187
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--IGYDCVADMWSLGITALEMAEGKP 179
+ DF + +V P W++PEV+Q+ GYD +D++S+GITA E+A G
Sbjct: 188 VHDF-----------PKYSVKVLP-WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 235
Query: 180 PYGDIH----------------------PMRAIFMIPTKP-------------------- 197
P+ D+ P + M P++
Sbjct: 236 PFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 295
Query: 198 -PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
PS ++P F FV +CL +NP+ R +AS +LNH F ++
Sbjct: 296 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 76/284 (26%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEY 63
+ P +V Y ++ + +LW+V + GS D++ ++E IA IL LK L+Y
Sbjct: 68 NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 127
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK-- 121
+H +HR +KA + D ++Y + R N+ + + G +
Sbjct: 128 IHHMGYVHRSVKASHILISVD-------------GKVYLSGLR---SNLSMISHGQRQRV 171
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--IGYDCVADMWSLGITALEMAEGKP 179
+ DF + +V P W++PEV+Q+ GYD +D++S+GITA E+A G
Sbjct: 172 VHDF-----------PKYSVKVLP-WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 219
Query: 180 PYGDIH----------------------PMRAIFMIPTKP-------------------- 197
P+ D+ P + M P++
Sbjct: 220 PFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 279
Query: 198 -PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
PS ++P F FV +CL +NP+ R +AS +LNH F ++
Sbjct: 280 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 323
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +++ +Y NT ++V + G + D + K TLSE E I+ L+ + LH
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLEVICALHK 129
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+HRD LK NILL+ + + KL DFG
Sbjct: 130 LNIVHRD---------------------------------LKPENILLDDDMNIKLTDFG 156
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVADMWSLGITALEMAEGKPP 180
+ QL D K V GTP ++APE+I+ GY DMWS G+ + G PP
Sbjct: 157 FSCQL-DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
Query: 181 YGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ M + MI + F P D ++ D VSR LV P++R TA E L H F
Sbjct: 216 FWHRKQMLMLRMIMSGNY-QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
Query: 239 QRH 241
Q++
Sbjct: 275 QQY 277
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 42/253 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ D P +++ Y ++ NTD+++VME C G + + + + K+ E + A I+ D L
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV-VHKRVFRESDAARIMKDVLSA 118
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ Y H HRD+K + + D D
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPD------------------------------SPL 148
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVADMWSLGITALEMAEGKP 179
KL DFG+A + R T +GTP++++P+V++ + G +C D WS G+ + G P
Sbjct: 149 KLIDFGLAARFKPGKMMR-TKVGTPYYVSPQVLEGLYGPEC--DEWSAGVMMYVLLCGYP 205
Query: 180 PYGDIHPMRAIFMIPTKPPP-SFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNH 235
P+ P M+ + +F E D W +P+ + R L K+P++R T+ + L H
Sbjct: 206 PFS--APTDXEVMLKIREGTFTFPEKD-WLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262
Query: 236 EFIQRHDTDPSQN 248
E+ ++ + +N
Sbjct: 263 EWFEKQLSSSPRN 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +++ +Y NT ++V + G + D + K TLSE E I+ L+ + LH
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLEVICALHK 142
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+HRD LK NILL+ + + KL DFG
Sbjct: 143 LNIVHRD---------------------------------LKPENILLDDDMNIKLTDFG 169
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVADMWSLGITALEMAEGKPP 180
+ QL D K V GTP ++APE+I+ GY DMWS G+ + G PP
Sbjct: 170 FSCQL-DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
Query: 181 YGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ M + MI + F P D ++ D VSR LV P++R TA E L H F
Sbjct: 229 FWHRKQMLMLRMIMSGNY-QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 239 QRH 241
Q++
Sbjct: 288 QQY 290
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 42/253 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ D P +++ Y ++ NTD+++VME C G + + + + K+ E + A I+ D L
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV-VHKRVFRESDAARIMKDVLSA 135
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ Y H HRD+K + + D D
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPD------------------------------SPL 165
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVADMWSLGITALEMAEGKP 179
KL DFG+A + R T +GTP++++P+V++ + G +C D WS G+ + G P
Sbjct: 166 KLIDFGLAARFKPGKMMR-TKVGTPYYVSPQVLEGLYGPEC--DEWSAGVMMYVLLCGYP 222
Query: 180 PYGDIHPMRAIFMIPTKPPP-SFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNH 235
P+ P M+ + +F E D W +P+ + R L K+P++R T+ + L H
Sbjct: 223 PFS--APTDXEVMLKIREGTFTFPEKD-WLNVSPQAESLIRRLLTKSPKQRITSLQALEH 279
Query: 236 EFIQRHDTDPSQN 248
E+ ++ + +N
Sbjct: 280 EWFEKQLSSSPRN 292
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
MQ + P++V + S+ D+++V++ G + ++ + E+ + +C+ +
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVKLFICELVMA 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YL +R IHRD +K NILL+ GH
Sbjct: 128 LDYLQNQRIIHRD---------------------------------MKPDNILLDEHGHV 154
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE---IGYDCVADMWSLGITALEMAEG 177
+ DF +A L + T+ GT +MAPE+ GY D WSLG+TA E+ G
Sbjct: 155 HITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + ++ T P W+ E + + + L NP++R +
Sbjct: 214 RRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 111/257 (43%), Gaps = 44/257 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q D P ++K Y + + ++VME G + D + LR+K SE + A I+ L G
Sbjct: 58 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLSG 116
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
YLH +HRD LK N+LL ++
Sbjct: 117 TTYLHKHNIVHRD---------------------------------LKPENLLLESKSRD 143
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
K+ DFG++ + K +GT +++APEV+++ YD D+WS G+ + G
Sbjct: 144 ALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTP---EFIDFVSRCLVKNPEERATASEMLN 234
PP+G + I K SF PD WT E V L P +R +A E LN
Sbjct: 202 YPPFGG-QTDQEILKRVEKGKFSFDPPD-WTQVSDEAKQLVKLMLTYEPSKRISAEEALN 259
Query: 235 HEFIQRHDTDPSQNGGK 251
H +I + + + GK
Sbjct: 260 HPWIVKFCSQKHTDVGK 276
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 44/244 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q D P ++K Y + + ++VME G + D + LR+K SE + A I+ L G
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-FSEVDAAVIMKQVLSG 133
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
YLH +HRD LK N+LL ++
Sbjct: 134 TTYLHKHNIVHRD---------------------------------LKPENLLLESKSRD 160
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
K+ DFG++ + K +GT +++APEV+++ YD D+WS G+ + G
Sbjct: 161 ALIKIVDFGLSAHF-EVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTP---EFIDFVSRCLVKNPEERATASEMLN 234
PP+G + I K SF PD WT E V L P +R +A E LN
Sbjct: 219 YPPFGG-QTDQEILKRVEKGKFSFDPPD-WTQVSDEAKQLVKLMLTYEPSKRISAEEALN 276
Query: 235 HEFI 238
H +I
Sbjct: 277 HPWI 280
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ ++ + L VMEY G + + R++ +E+ + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 117
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH R ++RDIK N++L+ +GH
Sbjct: 118 LEYLHSRDVVYRDIKLE---------------------------------NLMLDKDGHI 144
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A T GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 145 KITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + R +I + R P +PE ++ L K+P++R + A E++ H
Sbjct: 205 FYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 236 EFI 238
F
Sbjct: 262 RFF 264
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ ++ + L VMEY G + + R++ +E+ + +
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 120
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH R ++RDIK N++L+ +GH
Sbjct: 121 LEYLHSRDVVYRDIKLE---------------------------------NLMLDKDGHI 147
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A T GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 148 KITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + R +I + R P +PE ++ L K+P++R + A E++ H
Sbjct: 208 FYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 264
Query: 236 EFI 238
F
Sbjct: 265 RFF 267
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ ++ + L VMEY G + + R++ +E+ + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 117
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH R ++RDIK N++L+ +GH
Sbjct: 118 LEYLHSRDVVYRDIKLE---------------------------------NLMLDKDGHI 144
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A T GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 145 KITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + R +I + R P +PE ++ L K+P++R + A E++ H
Sbjct: 205 FYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 236 EFI 238
F
Sbjct: 262 RFF 264
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 40/251 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q P ++ + Y TD+ +++E G + D + +K++LSE+E + + L G
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-- 118
+ YLH ++ H F LK NI+L +
Sbjct: 128 VNYLHTKKIAH---------------------------------FDLKPENIMLLDKNIP 154
Query: 119 --HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H KL DFG+A ++ D + +N + GTP ++APE++ ADMWS+G+ +
Sbjct: 155 IPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNH 235
G P+ + I E T E DF+ + LVK +R T E L H
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 236 EFIQRHDTDPS 246
+I DT +
Sbjct: 274 PWITPVDTQQA 284
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ADFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 KVADFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ ++ + L VMEY G + + R++ +E+ + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 117
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH R ++RDIK N++L+ +GH
Sbjct: 118 LEYLHSRDVVYRDIKLE---------------------------------NLMLDKDGHI 144
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 145 KITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + R +I + R P +PE ++ L K+P++R + A E++ H
Sbjct: 205 FYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 236 EFI 238
F
Sbjct: 262 RFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ ++ + L VMEY G + + R++ +E+ + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 117
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH R ++RDIK N++L+ +GH
Sbjct: 118 LEYLHSRDVVYRDIKLE---------------------------------NLMLDKDGHI 144
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 145 KITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + R +I + R P +PE ++ L K+P++R + A E++ H
Sbjct: 205 FYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 236 EFI 238
F
Sbjct: 262 RFF 264
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 174
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 175 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 201
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ T+ GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 202 QVTDFGFAKRVKGATW---TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 259 FFADQPIQ 266
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ADFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 KVADFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ ++ + L VMEY G + + R++ +E+ + +
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 117
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH R ++RDIK N++L+ +GH
Sbjct: 118 LEYLHSRDVVYRDIKLE---------------------------------NLMLDKDGHI 144
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 145 KITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + R +I + R P +PE ++ L K+P++R + A E++ H
Sbjct: 205 FYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 236 EFI 238
F
Sbjct: 262 RFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ ++ + L VMEY G + + R++ +E+ + +
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSA 122
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH R ++RDIK N++L+ +GH
Sbjct: 123 LEYLHSRDVVYRDIKLE---------------------------------NLMLDKDGHI 149
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 150 KITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + R +I + R P +PE ++ L K+P++R + A E++ H
Sbjct: 210 FYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 266
Query: 236 EFI 238
F
Sbjct: 267 RFF 269
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ADFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 KVADFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 139
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 140 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 166
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + T+ GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 167 QVTDFGFAKRVK---GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 224 FFADQPIQ 231
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 43/247 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIM---RLRKKTLSEDEIATILCDT 57
++ D P ++K + + +++IVME C G + + + + R K LSE +A ++
Sbjct: 74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILL-NT 116
+ L Y H + +H+D LK NIL +T
Sbjct: 134 MNALAYFHSQHVVHKD---------------------------------LKPENILFQDT 160
Query: 117 EGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALE 173
H+ K+ DFG+A +L + GT +MAPEV + ++ + C D+WS G+
Sbjct: 161 SPHSPIKIIDFGLA-ELFKSDEHSTNAAGTALYMAPEVFKRDVTFKC--DIWSAGVVMYF 217
Query: 174 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
+ G P+ K P E TP+ +D + + L K+PE R +A+++L
Sbjct: 218 LLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277
Query: 234 NHEFIQR 240
+HE+ ++
Sbjct: 278 HHEWFKQ 284
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + T+ GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 QVTDFGFAKRVK---GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 44/246 (17%)
Query: 3 QCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTL-SEDEIATILCDTLKGL 61
+ + P++VK + ++ L++++++ G + RL K+ + +E+++ L + L
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
++LH I+RD LK NILL+ EGH K
Sbjct: 140 DHLHSLGIIYRD---------------------------------LKPENILLDEEGHIK 166
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
L DFG++ + D K + GT +MAPEV+ G+ AD WS G+ EM G P+
Sbjct: 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA-----SEMLNHE 236
+ MI P +PE + +NP R A E+ H
Sbjct: 227 QGKDRKETMTMILK---AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHS 283
Query: 237 FIQRHD 242
F D
Sbjct: 284 FFSTID 289
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 44/246 (17%)
Query: 3 QCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTL-SEDEIATILCDTLKGL 61
+ + P++VK + ++ L++++++ G + RL K+ + +E+++ L + L
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
++LH I+RD LK NILL+ EGH K
Sbjct: 140 DHLHSLGIIYRD---------------------------------LKPENILLDEEGHIK 166
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
L DFG++ + D K + GT +MAPEV+ G+ AD WS G+ EM G P+
Sbjct: 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA-----SEMLNHE 236
+ MI P +PE + +NP R A E+ H
Sbjct: 227 QGKDRKETMTMILK---AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHS 283
Query: 237 FIQRHD 242
F D
Sbjct: 284 FFSTID 289
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 44/246 (17%)
Query: 3 QCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTL-SEDEIATILCDTLKGL 61
+ + P++VK + ++ L++++++ G + RL K+ + +E+++ L + L
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
++LH I+RD LK NILL+ EGH K
Sbjct: 141 DHLHSLGIIYRD---------------------------------LKPENILLDEEGHIK 167
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
L DFG++ + D K + GT +MAPEV+ G+ AD WS G+ EM G P+
Sbjct: 168 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA-----SEMLNHE 236
+ MI P +PE + +NP R A E+ H
Sbjct: 228 QGKDRKETMTMILK---AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHS 284
Query: 237 FIQRHD 242
F D
Sbjct: 285 FFSTID 290
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 140
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 141 FEYLHSLDLIYRD---------------------------------LKPENLLIDEQGYI 167
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 168 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 225 FFADQPIQ 232
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 KVTDFGLAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 32/240 (13%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P ++ + + TD+ +++E G + D + K++L+EDE L L G
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDG 120
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH +R H D+K ++ D+ NV +I
Sbjct: 121 VHYLHSKRIAHFDLKP-ENIMLLDK--------NVPNPRI-------------------- 151
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG+A ++ +N + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 152 KLIDFGIAHKIEAGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNHEFIQ 239
+ + I E T E DF+ R LVK+P+ R T ++ L H +I+
Sbjct: 211 FLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 40/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q V+ + Y TD+ +++E G + D + +K++LSE+E + + L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-- 118
+ YLH ++ H F LK NI+L +
Sbjct: 128 VNYLHTKKIAH---------------------------------FDLKPENIMLLDKNIP 154
Query: 119 --HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H KL DFG+A ++ D + +N + GTP ++APE++ ADMWS+G+ +
Sbjct: 155 IPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNH 235
G P+ + I + E T E DF+ + LVK +R T E L H
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 236 EFI 238
+I
Sbjct: 274 PWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 40/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q V+ + Y TD+ +++E G + D + +K++LSE+E + + L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-- 118
+ YLH ++ H F LK NI+L +
Sbjct: 128 VNYLHTKKIAH---------------------------------FDLKPENIMLLDKNIP 154
Query: 119 --HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H KL DFG+A ++ D + +N + GTP ++APE++ ADMWS+G+ +
Sbjct: 155 IPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNH 235
G P+ + I + E T E DF+ + LVK +R T E L H
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 236 EFI 238
+I
Sbjct: 274 PWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 40/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q V+ + Y TD+ +++E G + D + +K++LSE+E + + L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-- 118
+ YLH ++ H F LK NI+L +
Sbjct: 128 VNYLHTKKIAH---------------------------------FDLKPENIMLLDKNIP 154
Query: 119 --HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H KL DFG+A ++ D + +N + GTP ++APE++ ADMWS+G+ +
Sbjct: 155 IPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNH 235
G P+ + I + E T E DF+ + LVK +R T E L H
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 236 EFI 238
+I
Sbjct: 274 PWI 276
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 37/187 (19%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
Q + P++VK S+ N++L++V+EY G + +R R SE +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLTF 155
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
EYLH I+RD LK N+L++ +G+ K
Sbjct: 156 EYLHSLDLIYRD---------------------------------LKPENLLIDQQGYIK 182
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
+ADFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP+
Sbjct: 183 VADFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 182 GDIHPMR 188
P++
Sbjct: 240 FADQPIQ 246
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 36/182 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTL-SEDEIATILCDTLK 59
+ + P+VVK + ++ L++++++ G + RL K+ + +E+++ L +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELAL 141
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL++LH I+RD LK NILL+ EGH
Sbjct: 142 GLDHLHSLGIIYRD---------------------------------LKPENILLDEEGH 168
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFG++ + D K + GT +MAPEV+ G+ AD WS G+ EM G
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL 228
Query: 180 PY 181
P+
Sbjct: 229 PF 230
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 44/247 (17%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
Q P+++ SY ++ +++V + G + D + K LSE E +I+ L+ +
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAV 213
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
+LH +HRD LK NILL+ +
Sbjct: 214 SFLHANNIVHRD---------------------------------LKPENILLDDNMQIR 240
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVADMWSLGITALEMA 175
L+DFG + L + K + GTP ++APE+++ GY D+W+ G+ +
Sbjct: 241 LSDFGFSCHL-EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEML 233
G PP+ + + MI + F P D + D +SR L +PE R TA + L
Sbjct: 300 AGSPPFWHRRQILMLRMI-MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL 358
Query: 234 NHEFIQR 240
H F +R
Sbjct: 359 QHPFFER 365
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADEPIQ 245
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q V+ + Y TD+ +++E G + D + +K++LSE+E + + L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-- 118
+ YLH ++ H F LK NI+L +
Sbjct: 128 VNYLHTKKIAH---------------------------------FDLKPENIMLLDKNIP 154
Query: 119 --HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H KL DFG+A ++ D + +N + GTP ++APE++ ADMWS+G+ +
Sbjct: 155 IPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNH 235
G P+ + I E T E DF+ + LVK +R T E L H
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 236 EFI 238
+I
Sbjct: 274 PWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 40/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q V+ + Y TD+ +++E G + D + +K++LSE+E + + L G
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILDG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-- 118
+ YLH ++ H F LK NI+L +
Sbjct: 128 VNYLHTKKIAH---------------------------------FDLKPENIMLLDKNIP 154
Query: 119 --HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H KL DFG+A ++ D + +N + GTP ++APE++ ADMWS+G+ +
Sbjct: 155 IPHIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNH 235
G P+ + I E T E DF+ + LVK +R T E L H
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273
Query: 236 EFI 238
+I
Sbjct: 274 PWI 276
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 KVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 KVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 146
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 147 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 173
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 174 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 231 FFADQPIQ 238
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 41/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ S+ + L VMEY G + + R++ SED + +
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSA 260
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH + N +Y+ L K N++L+ +GH
Sbjct: 261 LDYLHSEK-----------------------------NVVYRDL---KLENLMLDKDGHI 288
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A T GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 289 KITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + + +I + R P PE +S L K+P++R A E++ H
Sbjct: 349 FYNQDHEKLFELILME---EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
Query: 236 EFI 238
F
Sbjct: 406 RFF 408
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 41/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ S+ + L VMEY G + + R++ SED + +
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSA 263
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH + N +Y+ L K N++L+ +GH
Sbjct: 264 LDYLHSEK-----------------------------NVVYRDL---KLENLMLDKDGHI 291
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A T GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 292 KITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + + +I + R P PE +S L K+P++R A E++ H
Sbjct: 352 FYNQDHEKLFELILME---EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
Query: 236 EFI 238
F
Sbjct: 409 RFF 411
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 95/233 (40%), Gaps = 40/233 (17%)
Query: 6 SPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
SP +V YG+ + + I ME GS+ +++ + L ED L L+GLEYLH
Sbjct: 144 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVK-EQGCLPEDRALYYLGQALEGLEYLH 202
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-HAKLAD 124
RR +H D+KA N+LL+++G HA L D
Sbjct: 203 SRRILHGDVKAD---------------------------------NVLLSSDGSHAALCD 229
Query: 125 FGVA-----GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
FG A L ++ + + GT MAPEV+ D D+WS L M G
Sbjct: 230 FGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCH 289
Query: 180 PYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ I ++PPP P P + L K P R +A+E+
Sbjct: 290 PWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ +MA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 35/243 (14%)
Query: 1 MQQCDSPYVVKYYGSYF--KNTDLWIVMEYCGAGSVSDIMRL---RKKTLSEDEIATILC 55
+++ P +V+YY NT L+IVMEYC G ++ ++ ++ L E+ + ++
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 56 DTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLN 115
L ++ HR G L D LK N+ L+
Sbjct: 119 QLTLAL------KECHRRSDGGHTVLHRD----------------------LKPANVFLD 150
Query: 116 TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
+ + KL DFG+A L + T +GTP++M+PE + + Y+ +D+WSLG E+
Sbjct: 151 GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
PP+ I + R P ++ E + ++R L R + E+L +
Sbjct: 211 ALMPPFTAFSQKELAGKI--REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
Query: 236 EFI 238
I
Sbjct: 269 PLI 271
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R +E +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFAEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLIIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 174
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 175 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 201
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 202 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 259 FFADQPIQ 266
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG+A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGLAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 48/224 (21%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILC-DTLKGLEYLH 65
P++++ +G++ ++++M+Y G + + LRK + +A + LEYLH
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSL--LRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+ I+RD LK NILL+ GH K+ DF
Sbjct: 124 SKDIIYRD---------------------------------LKPENILLDKNGHIKITDF 150
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIH 185
G A + D + GTP ++APEV+ Y+ D WS GI EM G P+ D +
Sbjct: 151 GFAKYVPDVTY---XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207
Query: 186 PMRA---IFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
M+ I + PP F E + D +SR + ++ +R
Sbjct: 208 TMKTYEKILNAELRFPPFFNE------DVKDLLSRLITRDLSQR 245
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G +++ +K S DE T + +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGC---LLKYIRKIGSFDETCTRFYTAEIV 142
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 143 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 169
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N+ +GT +++PE++ E +D+W+LG ++
Sbjct: 170 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVA 229
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 230 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 285 YGPLKAH 291
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 148
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 149 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 175
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 176 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 233 FFADQPIQ 240
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P ++ + + TD+ +++E G + D + K++L+EDE L L G
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDG 141
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH +R H D+K ++ D+ NV +I
Sbjct: 142 VHYLHSKRIAHFDLKP-ENIMLLDK--------NVPNPRI-------------------- 172
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG+A ++ +N + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 173 KLIDFGIAHKIEAGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNHEFIQ 239
+ + I E T E DF+ R LVK+P+ R ++ L H +I+
Sbjct: 232 FLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP +APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 139
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 140 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 166
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N+ +GT +++PE++ E +D+W+LG ++
Sbjct: 167 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 227 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 281
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 282 YGPLKAH 288
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 96/233 (41%), Gaps = 40/233 (17%)
Query: 6 SPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
SP +V YG+ + + I ME GS+ +++ + L ED L L+GLEYLH
Sbjct: 125 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVK-EQGCLPEDRALYYLGQALEGLEYLH 183
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-HAKLAD 124
RR +H D+KA N+LL+++G HA L D
Sbjct: 184 SRRILHGDVKAD---------------------------------NVLLSSDGSHAALCD 210
Query: 125 FGVAGQLT-DTMAK----RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
FG A L D + K + + GT MAPEV+ D D+WS L M G
Sbjct: 211 FGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCH 270
Query: 180 PYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ I ++PPP P P + L K P R +A+E+
Sbjct: 271 PWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 144 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 170
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N+ +GT +++PE++ E +D+W+LG ++
Sbjct: 171 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 231 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 285
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 286 YGPLKAH 292
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P ++ + + TD+ +++E G + D + K++L+EDE L L G
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQILDG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH +R H D+K ++ D+ NV +I
Sbjct: 128 VHYLHSKRIAHFDLKP-ENIMLLDK--------NVPNPRI-------------------- 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG+A ++ +N + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 159 KLIDFGIAHKIEAGNEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERATASEMLNHEFIQ 239
+ + I E T E DF+ R LVK+P+ R ++ L H +I+
Sbjct: 218 FLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 174
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 175 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 201
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 202 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 259 FFADQPIQ 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ S+ + L VMEY G + + R++ SED + +
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSA 120
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH + N +Y+ L K N++L+ +GH
Sbjct: 121 LDYLHSEK-----------------------------NVVYRDL---KLENLMLDKDGHI 148
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 149 KITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + + +I + R P PE +S L K+P++R A E++ H
Sbjct: 209 FYNQDHEKLFELILME---EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 265
Query: 236 EFI 238
F
Sbjct: 266 RFF 268
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 53/250 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 143 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 169
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVA 229
Query: 177 GKPPYGDIHPMRA-----IFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 231
G PP+ RA IF K F P+ + P+ D V + LV + +R E
Sbjct: 230 GLPPF------RAGNEGLIFAKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEE 281
Query: 232 MLNHEFIQRH 241
M + ++ H
Sbjct: 282 MEGYGPLKAH 291
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ S+ + L VMEY G + + R++ SED + +
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSA 122
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH + N +Y+ L K N++L+ +GH
Sbjct: 123 LDYLHSEK-----------------------------NVVYRDL---KLENLMLDKDGHI 150
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 151 KITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + + +I + R P PE +S L K+P++R A E++ H
Sbjct: 211 FYNQDHEKLFELILME---EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 267
Query: 236 EFI 238
F
Sbjct: 268 RFF 270
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 46/251 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P ++K ++F D +IV+E G + D + + K L E L
Sbjct: 208 LKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLA 265
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
++YLH IHRD LK N+LL+++
Sbjct: 266 VQYLHENGIIHRD---------------------------------LKPENVLLSSQEED 292
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADMWSLGITALEM 174
K+ DFG + L +T R T+ GTP ++APEV+ + GY+ D WSLG+
Sbjct: 293 CLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 351
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASE 231
G PP+ + ++ T +F P+VW + + +D V + LV +P+ R T E
Sbjct: 352 LSGYPPFSEHRTQVSLKDQITSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEE 410
Query: 232 MLNHEFIQRHD 242
L H ++Q D
Sbjct: 411 ALRHPWLQDED 421
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R SE +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++AP +I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++ K S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 KVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 41/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q P++ S+ + L VMEY G + + R++ SED + +
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSA 121
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+YLH + N +Y+ L K N++L+ +GH
Sbjct: 122 LDYLHSEK-----------------------------NVVYRDL---KLENLMLDKDGHI 149
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+ + A GTP ++APEV+++ Y D W LG+ EM G+ P
Sbjct: 150 KITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLNH 235
+ + + +I + R P PE +S L K+P++R A E++ H
Sbjct: 210 FYNQDHEKLFELILME---EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 266
Query: 236 EFI 238
F
Sbjct: 267 RFF 269
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++ K S+ N++L++VMEY G + +R R SE +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 KVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 KVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 47/239 (19%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P+++K Y +D+++VMEY G + D + + L E E + L G++Y H
Sbjct: 76 PHIIKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+HRD LK N+LL+ +AK+ADFG
Sbjct: 135 HMVVHRD---------------------------------LKPENVLLDAHMNAKIADFG 161
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGDIH 185
++ ++D R + G+P + APEVI Y D+WS G+ + G P+ D H
Sbjct: 162 LSNMMSDGEFLRXSC-GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220
Query: 186 PMRAIFMIPTKPPP----SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
+PT F P P I + L +P +RAT ++ HE+ ++
Sbjct: 221 -------VPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 146
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 147 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 173
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 174 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 231 FFADQPIQ 238
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 141 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 167
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 168 HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 228 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 283 YGPLKAH 289
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 46/251 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P ++K ++F D +IV+E G + D + + K L E L
Sbjct: 194 LKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLA 251
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
++YLH IHRD LK N+LL+++
Sbjct: 252 VQYLHENGIIHRD---------------------------------LKPENVLLSSQEED 278
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADMWSLGITALEM 174
K+ DFG + L +T R T+ GTP ++APEV+ + GY+ D WSLG+
Sbjct: 279 CLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASE 231
G PP+ + ++ T +F P+VW + + +D V + LV +P+ R T E
Sbjct: 338 LSGYPPFSEHRTQVSLKDQITSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEE 396
Query: 232 MLNHEFIQRHD 242
L H ++Q D
Sbjct: 397 ALRHPWLQDED 407
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 124
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 125 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 151
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 152 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 211
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 212 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 266
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 267 YGPLKAH 273
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 139
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 140 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 166
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 167 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 227 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 281
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 282 YGPLKAH 288
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 117
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 118 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 144
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 145 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 204
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 205 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 259
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 260 YGPLKAH 266
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 143 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 169
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 230 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 285 YGPLKAH 291
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 143 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 169
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 230 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 285 YGPLKAH 291
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 118
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 119 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 145
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 146 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 206 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 260
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 261 YGPLKAH 267
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 141 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 167
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 168 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 228 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 283 YGPLKAH 289
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 141 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 167
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 168 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 228 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 283 YGPLKAH 289
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 46/251 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P ++K ++F D +IV+E G + D + + K L E L
Sbjct: 68 LKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLA 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
++YLH IHRD LK N+LL+++
Sbjct: 126 VQYLHENGIIHRD---------------------------------LKPENVLLSSQEED 152
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADMWSLGITALEM 174
K+ DFG + L +T R T+ GTP ++APEV+ + GY+ D WSLG+
Sbjct: 153 CLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 211
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASE 231
G PP+ + ++ T +F P+VW + + +D V + LV +P+ R T E
Sbjct: 212 LSGYPPFSEHRTQVSLKDQITSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEE 270
Query: 232 MLNHEFIQRHD 242
L H ++Q D
Sbjct: 271 ALRHPWLQDED 281
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 141 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 167
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 168 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 228 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 282
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 283 YGPLKAH 289
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 143 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 169
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 230 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 285 YGPLKAH 291
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 153
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 154 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 180
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 181 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 238 FFADQPIQ 245
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++VK S+ N++L++VMEY G + +R R E +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N+L++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLLIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 QVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 1 MQQCDSPYVVKYYGSYF--KNTDLWIVMEYCGAGSVSDIMRL---RKKTLSEDEIATILC 55
+++ P +V+YY NT L+IVMEYC G ++ ++ ++ L E+ + ++
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 56 DTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLN 115
L ++ HR G L D LK N+ L+
Sbjct: 119 QLTLAL------KECHRRSDGGHTVLHRD----------------------LKPANVFLD 150
Query: 116 TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
+ + KL DFG+A L + +GTP++M+PE + + Y+ +D+WSLG E+
Sbjct: 151 GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
PP+ I + R P ++ E + ++R L R + E+L +
Sbjct: 211 ALMPPFTAFSQKELAGKI--REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
Query: 236 EFI 238
I
Sbjct: 269 PLI 271
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 143
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 144 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 170
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 171 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 231 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 285
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 286 YGPLKAH 292
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 46/251 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P ++K ++F D +IV+E G + D + + K L E L
Sbjct: 69 LKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLA 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
++YLH IHRD LK N+LL+++
Sbjct: 127 VQYLHENGIIHRD---------------------------------LKPENVLLSSQEED 153
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADMWSLGITALEM 174
K+ DFG + L +T R T+ GTP ++APEV+ + GY+ D WSLG+
Sbjct: 154 CLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASE 231
G PP+ + ++ T +F P+VW + + +D V + LV +P+ R T E
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
Query: 232 MLNHEFIQRHD 242
L H ++Q D
Sbjct: 272 ALRHPWLQDED 282
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 119
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 120 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 146
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 147 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 206
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 207 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 261
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 262 YGPLKAH 268
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 46/251 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P ++K ++F D +IV+E G + D + + K L E L
Sbjct: 69 LKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLA 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
++YLH IHRD LK N+LL+++
Sbjct: 127 VQYLHENGIIHRD---------------------------------LKPENVLLSSQEED 153
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADMWSLGITALEM 174
K+ DFG + L +T R T+ GTP ++APEV+ + GY+ D WSLG+
Sbjct: 154 CLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASE 231
G PP+ + ++ T +F P+VW + + +D V + LV +P+ R T E
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
Query: 232 MLNHEFIQRHD 242
L H ++Q D
Sbjct: 272 ALRHPWLQDED 282
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 46/251 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P ++K ++F D +IV+E G + D + + K L E L
Sbjct: 69 LKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLA 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
++YLH IHRD LK N+LL+++
Sbjct: 127 VQYLHENGIIHRD---------------------------------LKPENVLLSSQEED 153
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADMWSLGITALEM 174
K+ DFG + L +T R T+ GTP ++APEV+ + GY+ D WSLG+
Sbjct: 154 CLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASE 231
G PP+ + ++ T +F P+VW + + +D V + LV +P+ R T E
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
Query: 232 MLNHEFIQRHD 242
L H ++Q D
Sbjct: 272 ALRHPWLQDED 282
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 120
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 121 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 147
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 148 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 207
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 208 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 262
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 263 YGPLKAH 269
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 44/248 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L+++MEY G V D + + + E E + +
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKFRQIVSA 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H +R +HRD LKA N+LL+ + +
Sbjct: 124 VQYCHQKRIVHRD---------------------------------LKAENLLLDADMNI 150
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K +T G+P + APE+ Q YD D+WSLG+ + G
Sbjct: 151 KIADFGFSNEFT-VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 209
Query: 180 PYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
P+ ++ +R + +R P + + + + R LV NP +R T +++ +
Sbjct: 210 PFDGQNLKELRERVL-----RGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 264
Query: 238 IQR-HDTD 244
I H+ D
Sbjct: 265 INAGHEED 272
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 47/246 (19%)
Query: 6 SPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
SP++V + ++ T L ++++Y G + + R++ +E E+ + + + LE+LH
Sbjct: 118 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER-FTEHEVQIYVGEIVLALEHLH 176
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
I+RDIK NILL++ GH L DF
Sbjct: 177 KLGIIYRDIKLE---------------------------------NILLDSNGHVVLTDF 203
Query: 126 GVAGQ-LTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSLGITALEMAEGKPPY- 181
G++ + + D + GT +MAP++++ + G+D D WSLG+ E+ G P+
Sbjct: 204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
Query: 182 --GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLN 234
G+ + I K P + P + D + R L+K+P++R A E+
Sbjct: 264 VDGEKNSQAEISRRILKSEPPY--PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 321
Query: 235 HEFIQR 240
H F Q+
Sbjct: 322 HLFFQK 327
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 107/250 (42%), Gaps = 53/250 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 142
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 143 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 169
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 170 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
Query: 177 GKPPYGDIHPMRA-----IFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 231
G PP+ RA IF K F P+ + P+ D V + LV + +R E
Sbjct: 230 GLPPF------RAGNEGLIFAKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEE 281
Query: 232 MLNHEFIQRH 241
M + ++ H
Sbjct: 282 MEGYGPLKAH 291
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 46/251 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P ++K ++F D +IV+E G + D + + K L E L
Sbjct: 75 LKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLA 132
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
++YLH IHRD LK N+LL+++
Sbjct: 133 VQYLHENGIIHRD---------------------------------LKPENVLLSSQEED 159
Query: 120 --AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADMWSLGITALEM 174
K+ DFG + L +T R T+ GTP ++APEV+ + GY+ D WSLG+
Sbjct: 160 CLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 218
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASE 231
G PP+ + ++ T +F P+VW + + +D V + LV +P+ R T E
Sbjct: 219 LSGYPPFSEHRTQVSLKDQITSGKYNFI-PEVWAEVSEKALDLVKKLLVVDPKARFTTEE 277
Query: 232 MLNHEFIQRHD 242
L H ++Q D
Sbjct: 278 ALRHPWLQDED 288
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y ++ + L+ + Y G ++++ +K S DE T + +
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 145
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 146 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 172
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 173 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 232
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P + P+ D V + LV + +R EM
Sbjct: 233 GLPPFRAGNEY---LIFQKIIKLEYDF--PAAFFPKARDLVEKLLVLDATKRLGCEEMEG 287
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 288 YGPLKAH 294
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 47/247 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTL 58
M + D P+ VK Y + + L+ + Y G ++++ +K S DE T + +
Sbjct: 91 MSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNG---ELLKYIRKIGSFDETCTRFYTAEIV 147
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
LEYLH + IHRD LK NILLN +
Sbjct: 148 SALEYLHGKGIIHRD---------------------------------LKPENILLNEDM 174
Query: 119 HAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
H ++ DFG A L+ A+ N +GT +++PE++ E +D+W+LG ++
Sbjct: 175 HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 234
Query: 177 GKPPY--GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G PP+ G+ + IF K F P+ + P+ D V + LV + +R EM
Sbjct: 235 GLPPFRAGNEY---LIFQKIIKLEYDF--PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 289
Query: 235 HEFIQRH 241
+ ++ H
Sbjct: 290 YGPLKAH 296
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDTDPS 246
+I+ DT +
Sbjct: 273 PWIKPKDTQQA 283
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q + P++ K S+ N++L++VMEY G + +R R E +
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
EYLH I+RD LK N++++ +G+
Sbjct: 155 FEYLHSLDLIYRD---------------------------------LKPENLMIDQQGYI 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG A ++ + + GTP ++APE+I GY+ D W+LG+ EMA G PP
Sbjct: 182 KVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 181 YGDIHPMR 188
+ P++
Sbjct: 239 FFADQPIQ 246
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 40/248 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDT 243
+I+ DT
Sbjct: 273 PWIKPKDT 280
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDTDPS 246
+I+ DT +
Sbjct: 273 PWIKPKDTQQA 283
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDTDPS 246
+I+ DT +
Sbjct: 273 PWIKPKDTQQA 283
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDTDPS 246
+I+ DT +
Sbjct: 273 PWIKPKDTQQA 283
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 40/248 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDT 243
+I+ DT
Sbjct: 273 PWIKPKDT 280
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 40/248 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDT 243
+I+ DT
Sbjct: 273 PWIKPKDT 280
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 40/248 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 126 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 157 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 216 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271
Query: 236 EFIQRHDT 243
+I+ DT
Sbjct: 272 PWIKPKDT 279
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 40/248 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDT 243
+I+ DT
Sbjct: 273 PWIKPKDT 280
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 40/251 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDTDPS 246
+I+ DT +
Sbjct: 273 PWIKPKDTQQA 283
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 40/248 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 126 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 157 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 216 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271
Query: 236 EFIQRHDT 243
+I+ DT
Sbjct: 272 PWIKPKDT 279
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLR--KKTLSEDEIATILCDTL 58
M++ P +V + G+ + +L IV EY GS+ ++ ++ L E ++ D
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 59 KGLEYLHLRRK--IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
KG+ YLH R +HR+ LK+ N+L++
Sbjct: 148 KGMNYLHNRNPPIVHRN---------------------------------LKSPNLLVDK 174
Query: 117 EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
+ K+ DFG++ T + GTP WMAPEV+++ + +D++S G+ E+A
Sbjct: 175 KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+ P+G+++P + + + K P P+ + C P +R + + +++
Sbjct: 235 LQQPWGNLNPAQVVAAVGFK-CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 35/243 (14%)
Query: 1 MQQCDSPYVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRL---RKKTLSEDEIATILC 55
+++ P +V+YY NT L+IVMEYC G ++ ++ ++ L E+ + ++
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 56 DTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLN 115
L ++ HR G L D LK N+ L+
Sbjct: 119 QLTLAL------KECHRRSDGGHTVLHRD----------------------LKPANVFLD 150
Query: 116 TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
+ + KL DFG+A L +GTP++M+PE + + Y+ +D+WSLG E+
Sbjct: 151 GKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
PP+ I + R P ++ E + ++R L R + E+L +
Sbjct: 211 ALMPPFTAFSQKELAGKI--REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
Query: 236 EFI 238
I
Sbjct: 269 PLI 271
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
Q + P++V + + + L+ V+EY G + M+ R++ L E+ + L
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLAL 166
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
YLH R I+RD LK N+LL++EGH K
Sbjct: 167 NYLHERGIIYRD---------------------------------LKLDNVLLDSEGHIK 193
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
L D+G+ + +T GTP ++APE+++ Y D W+LG+ EM G+ P+
Sbjct: 194 LTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 45/247 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRL-RKKTLSEDEIATILCDTLK 59
+++ P++V ++ L++++EY G + M+L R+ ED L +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISM 132
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L +LH + I+RD LK NI+LN +GH
Sbjct: 133 ALGHLHQKGIIYRD---------------------------------LKPENIMLNHQGH 159
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFG+ + +T GT +MAPE++ G++ D WSLG +M G P
Sbjct: 160 VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
Query: 180 PYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLN 234
P+ + + I I P T E D + + L +N R A E+
Sbjct: 220 PFTGENRKKTIDKILK---CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276
Query: 235 HEFIQRH 241
H F RH
Sbjct: 277 HPFF-RH 282
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 44/248 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L+++MEY G V D + + + E E + +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKFRQIVSA 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H +R +HRD LKA N+LL+ + +
Sbjct: 127 VQYCHQKRIVHRD---------------------------------LKAENLLLDADMNI 153
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K + G P + APE+ Q YD D+WSLG+ + G
Sbjct: 154 KIADFGFSNEFT-VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 180 PYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
P+ ++ +R + +R P + + + + R LV NP +R T +++ +
Sbjct: 213 PFDGQNLKELRERVL-----RGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267
Query: 238 IQR-HDTD 244
I H+ D
Sbjct: 268 INAGHEED 275
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDI-MRLRKKTLSEDEIATILCDTLKGLEYLH 65
P V+ + Y +++ +++EY G + + + + +SE+++ ++ L+G+ YLH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+H D+K N++ + IY G K+ DF
Sbjct: 149 QNNIVHLDLKPQ----------------NILLSSIYPL--------------GDIKIVDF 178
Query: 126 GVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY-GDI 184
G++ ++ R ++GTP ++APE++ DMW++GI A + P+ G+
Sbjct: 179 GMSRKIGHACELRE-IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237
Query: 185 HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHD 242
+ + + S + DF+ LVKNPE+R TA L+H ++Q+ D
Sbjct: 238 NQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD 295
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 38/238 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLR--KKTLSEDEIATILCDTL 58
M++ P +V + G+ + +L IV EY GS+ ++ ++ L E ++ D
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 59 KGLEYLHLRRK--IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
KG+ YLH R +HRD LK+ N+L++
Sbjct: 148 KGMNYLHNRNPPIVHRD---------------------------------LKSPNLLVDK 174
Query: 117 EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE 176
+ K+ DFG++ GTP WMAPEV+++ + +D++S G+ E+A
Sbjct: 175 KYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+ P+G+++P + + + K P P+ + C P +R + + +++
Sbjct: 235 LQQPWGNLNPAQVVAAVGFK-CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 40/248 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ ++ E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQRHDT 243
+I+ DT
Sbjct: 273 PWIKPKDT 280
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 40/230 (17%)
Query: 23 WIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLV 82
+IVMEY ++ DI+ + I ++ D + L + H IHRD+K
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADACQALNFSHQNGIIHRDVKPA----- 145
Query: 83 YDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRN 139
NIL++ K+ DFG+A + D+ + +
Sbjct: 146 ----------------------------NILISATNAVKVVDFGIARAIADSGNSVXQTA 177
Query: 140 TVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFM-IPTKP- 197
VIGT +++PE + D +D++SLG E+ G+PP+ P+ + + P
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 237
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDPSQ 247
PPS R + + + V + L KNPE R + + + ++ H+ +P +
Sbjct: 238 PPSARH-EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
Q + P++V + + + L+ V+EY G + M+ R++ L E+ + L
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLAL 119
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
YLH R I+RD LK N+LL++EGH K
Sbjct: 120 NYLHERGIIYRD---------------------------------LKLDNVLLDSEGHIK 146
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
L D+G+ + + GTP ++APE+++ Y D W+LG+ EM G+ P+
Sbjct: 147 LTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
Q + P++V + + + L+ V+EY G + M+ R++ L E+ + L
Sbjct: 65 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLAL 123
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
YLH R I+RD LK N+LL++EGH K
Sbjct: 124 NYLHERGIIYRD---------------------------------LKLDNVLLDSEGHIK 150
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
L D+G+ + + GTP ++APE+++ Y D W+LG+ EM G+ P+
Sbjct: 151 LTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 48/251 (19%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMRLRKKTLSEDEIATILCDTLKGLEY 63
+ P++ + ++ +L+ VMEY G + I K LS + + GL++
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA--AEIILGLQF 134
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
LH + ++RD LK NILL+ +GH K+A
Sbjct: 135 LHSKGIVYRD---------------------------------LKLDNILLDKDGHIKIA 161
Query: 124 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD 183
DFG+ + AK N GTP ++APE++ Y+ D WS G+ EM G+ P+
Sbjct: 162 DFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 221
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS---------EMLN 234
I P P E D + + V+ PE+R +N
Sbjct: 222 QDEEELFHSIRMDNPFY---PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 278
Query: 235 HEFIQRHDTDP 245
E ++R + DP
Sbjct: 279 WEELERKEIDP 289
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 99/251 (39%), Gaps = 48/251 (19%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMRLRKKTLSEDEIATILCDTLKGLEY 63
+ P++ + ++ +L+ VMEY G + I K LS + + GL++
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA--AEIILGLQF 133
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
LH + ++RD LK NILL+ +GH K+A
Sbjct: 134 LHSKGIVYRD---------------------------------LKLDNILLDKDGHIKIA 160
Query: 124 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD 183
DFG+ + AK N GTP ++APE++ Y+ D WS G+ EM G+ P+
Sbjct: 161 DFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS---------EMLN 234
I P P E D + + V+ PE+R +N
Sbjct: 221 QDEEELFHSIRMDNPFY---PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277
Query: 235 HEFIQRHDTDP 245
E ++R + DP
Sbjct: 278 WEELERKEIDP 288
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 40/244 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQ 239
+I+
Sbjct: 273 PWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 40/244 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P V+ + Y TD+ +++E G + D + K++L+E+E L L G
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH + H D+K ++ DR NV +I
Sbjct: 127 VYYLHSLQIAHFDLKP-ENIMLLDR--------NVPKPRI-------------------- 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG+A ++ D + + GTP ++APE++ ADMWS+G+ + G P
Sbjct: 158 KIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
Query: 181 Y-GDIHPMRAIFMIPTKPPPSFREPDVW----TPEFIDFVSRCLVKNPEERATASEMLNH 235
+ GD + ++ D + + DF+ R LVK+P++R T + L H
Sbjct: 217 FLGDTKQE----TLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 236 EFIQ 239
+I+
Sbjct: 273 PWIK 276
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 45/247 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRL-RKKTLSEDEIATILCDTLK 59
+++ P++V ++ L++++EY G + M+L R+ ED L +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISM 132
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
L +LH + I+RD LK NI+LN +GH
Sbjct: 133 ALGHLHQKGIIYRD---------------------------------LKPENIMLNHQGH 159
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFG+ + + GT +MAPE++ G++ D WSLG +M G P
Sbjct: 160 VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
Query: 180 PYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASEMLN 234
P+ + + I I P T E D + + L +N R A E+
Sbjct: 220 PFTGENRKKTIDKILK---CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276
Query: 235 HEFIQRH 241
H F RH
Sbjct: 277 HPFF-RH 282
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 34/180 (18%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
Q + P++V + + + L+ V+EY G + M+ R++ L E+ + L
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLAL 134
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
YLH R I+RD LK N+LL++EGH K
Sbjct: 135 NYLHERGIIYRD---------------------------------LKLDNVLLDSEGHIK 161
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
L D+G+ + + GTP ++APE+++ Y D W+LG+ EM G+ P+
Sbjct: 162 LTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 71/256 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGS 78
TD ++VM + G +D+ +L K + L ED I ++ LKGL Y+H IHRD
Sbjct: 103 TDFYLVMPFMG----TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRD----- 153
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 138
LK GN+ +N + K+ DFG+A Q M
Sbjct: 154 ----------------------------LKPGNLAVNEDCELKILDFGLARQADSEMX-- 183
Query: 139 NTVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGKPPY-GDIH--PMRAIFMIP 194
+ T ++ APEVI + Y D+WS+G EM GK + G H ++ I +
Sbjct: 184 -GXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT 242
Query: 195 TKPPPSFRE--------------PDVWTPEF-----------IDFVSRCLVKNPEERATA 229
PP F + P++ +F ++ + + LV + E+R TA
Sbjct: 243 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTA 302
Query: 230 SEMLNHEFIQR-HDTD 244
E L H + + HDT+
Sbjct: 303 GEALAHPYFESLHDTE 318
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 44/252 (17%)
Query: 5 DSPYVVKYYGSYFKNTDL----WIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ P +V Y + T +IVMEY ++ DI+ + I ++ D +
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADACQA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L + H IHRD+K NI+++
Sbjct: 129 LNFSHQNGIIHRDVKPA---------------------------------NIMISATNAV 155
Query: 121 KLADFGVAGQLTDT---MAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
K+ DFG+A + D+ + + VIGT +++PE + D +D++SLG E+ G
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 178 KPPYGDIHPMRAIFM-IPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+PP+ P+ + + P PPS R + + + V + L KNPE R + +
Sbjct: 216 EPPFTGDSPVSVAYQHVREDPIPPSARH-EGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
Query: 236 EFIQRHDTDPSQ 247
+ ++ H+ +P +
Sbjct: 275 DLVRVHNGEPPE 286
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 48/231 (20%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P+++K Y TD+ +V+EY G G + D + + KK ++EDE + +EY H
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAG-GELFDYI-VEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD LK N+LL+ + K+ADFG
Sbjct: 127 HKIVHRD---------------------------------LKPENLLLDDNLNVKIADFG 153
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGDIH 185
++ +TD + T G+P + APEVI Y D+WS GI M G+ P+ D
Sbjct: 154 LSNIMTDGNFLK-TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD-- 210
Query: 186 PMRAIFMIPT--KPPPS--FREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
IP K S + PD +P + R +V +P +R T E+
Sbjct: 211 -----EFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEI 256
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 40/230 (17%)
Query: 23 WIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLV 82
+IVMEY ++ DI+ + I ++ D + L + H IHRD+K
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADACQALNFSHQNGIIHRDVKPA----- 145
Query: 83 YDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRN 139
NI+++ K+ DFG+A + D+ + +
Sbjct: 146 ----------------------------NIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 140 TVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFM-IPTKP- 197
VIGT +++PE + D +D++SLG E+ G+PP+ P+ + + P
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 237
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDPSQ 247
PPS R + + + V + L KNPE R + + + ++ H+ +P +
Sbjct: 238 PPSARH-EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 34/243 (13%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P ++ Y +++V E G + D + LR+K SE E + +L K +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKI-LRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD+K + L+ ++GN ++ DFG
Sbjct: 135 QGVVHRDLKPSN------------------------ILYVDESGN-----PESIRICDFG 165
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYG---D 183
A QL T T ++APEV++ GYD D+WSLG+ M G P+ D
Sbjct: 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD 225
Query: 184 IHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHD 242
P + I + K S + + D VS+ L +P +R TA+ +L H +I D
Sbjct: 226 DTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD 285
Query: 243 TDP 245
P
Sbjct: 286 QLP 288
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 40/230 (17%)
Query: 23 WIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLV 82
+IVMEY ++ DI+ + I ++ D + L + H IHRD+K
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADACQALNFSHQNGIIHRDVKPA----- 145
Query: 83 YDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRN 139
NI+++ K+ DFG+A + D+ + +
Sbjct: 146 ----------------------------NIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 140 TVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFM-IPTKP- 197
VIGT +++PE + D +D++SLG E+ G+PP+ P+ + + P
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 237
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDPSQ 247
PPS R + + + V + L KNPE R + + + ++ H+ +P +
Sbjct: 238 PPSARH-EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 102/241 (42%), Gaps = 46/241 (19%)
Query: 7 PYVVKYYGSYFKNTD----LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLE 62
P +V++Y S+ + +V E +G++ ++ R K + + LKGL+
Sbjct: 85 PNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK-RFKVXKIKVLRSWCRQILKGLQ 143
Query: 63 YLHLRRK--IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+LH R IHRD+K C+ I + G
Sbjct: 144 FLHTRTPPIIHRDLK-----------------CDNI---------------FITGPTGSV 171
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ D G+A + AK VIGTP + APE +E YD D+++ G LE A + P
Sbjct: 172 KIGDLGLATLKRASFAK--AVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYP 228
Query: 181 YGDIHPMRAIFMIPTK--PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
Y + I+ T P SF V PE + + C+ +N +ER + ++LNH F
Sbjct: 229 YSECQNAAQIYRRVTSGVKPASF--DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286
Query: 239 Q 239
Q
Sbjct: 287 Q 287
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 44/247 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +V+ + S + ++V + G + + + R+ SE + + + L+ + + HL
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-YYSEADASHCIQQILESVNHCHL 121
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA---KLA 123
+HRD LK N+LL ++ KLA
Sbjct: 122 NGIVHRD---------------------------------LKPENLLLASKSKGAAVKLA 148
Query: 124 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD 183
DFG+A ++ GTP +++PEV+++ Y DMW+ G+ + G PP+ D
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 184 IHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
R I P P E D TPE D +++ L NP +R TASE L H +I
Sbjct: 209 EDQHRLYQQIKAGAYDFPSP---EWDTVTPEAKDLINKMLTINPAKRITASEALKHPWIC 265
Query: 240 RHDTDPS 246
+ T S
Sbjct: 266 QRSTVAS 272
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 44/247 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +V+ + S + ++V + G + + + R+ SE + + + L+ + + HL
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-YYSEADASHCIQQILESVNHCHL 121
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA---KLA 123
+HRD LK N+LL ++ KLA
Sbjct: 122 NGIVHRD---------------------------------LKPENLLLASKSKGAAVKLA 148
Query: 124 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD 183
DFG+A ++ GTP +++PEV+++ Y DMW+ G+ + G PP+ D
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 184 IHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
R I P P E D TPE D +++ L NP +R TASE L H +I
Sbjct: 209 EDQHRLYQQIKAGAYDFPSP---EWDTVTPEAKDLINKMLTINPAKRITASEALKHPWIC 265
Query: 240 RHDTDPS 246
+ T S
Sbjct: 266 QRSTVAS 272
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 42/176 (23%)
Query: 6 SPYVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEY 63
S ++VKY G + +L +VMEY +G + D ++ + L + KG+EY
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
L RR +HRD L A NIL+ +E H K+A
Sbjct: 127 LGSRRCVHRD---------------------------------LAARNILVESEAHVKIA 153
Query: 124 DFGVAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
DFG+A L + K V+ P FW APE + + + +D+WS G+ E+
Sbjct: 154 DFGLAKLL--PLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 40/230 (17%)
Query: 23 WIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLV 82
+IVMEY ++ DI+ + I ++ D + L + H IHRD+K
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADACQALNFSHQNGIIHRDVKPA----- 145
Query: 83 YDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRN 139
NI+++ K+ DFG+A + D+ + +
Sbjct: 146 ----------------------------NIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 140 TVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKP- 197
VIGT +++PE + D +D++SLG E+ G+PP+ GD A + P
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPI 237
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDPSQ 247
PPS R + + + V + L KNPE R + + + ++ H+ +P +
Sbjct: 238 PPSARH-EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE 286
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 44/247 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q D P ++K Y + ++V E G + D + RK+ SE + A I+ L G
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSG 144
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT---E 117
+ Y+H + +HRD LK N+LL + +
Sbjct: 145 ITYMHKNKIVHRD---------------------------------LKPENLLLESKSKD 171
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
+ ++ DFG++ + K IGT +++APEV+ YD D+WS G+ + G
Sbjct: 172 ANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 229
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLN 234
PP+ + I K +F P W + D + + L P R +A + L+
Sbjct: 230 CPPFNGANEY-DILKKVEKGKYTFELPQ-WKKVSESAKDLIRKMLTYVPSMRISARDALD 287
Query: 235 HEFIQRH 241
HE+IQ +
Sbjct: 288 HEWIQTY 294
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 90/242 (37%), Gaps = 47/242 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P V+K+ G +K+ L + EY G++ I++ + + D G
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH IHRD L + N L+ +
Sbjct: 121 MAYLHSMNIIHRD---------------------------------LNSHNCLVRENKNV 147
Query: 121 KLADFGVAGQLTDTMA--------------KRNTVIGTPFWMAPEVIQEIGYDCVADMWS 166
+ADFG+A + D KR TV+G P+WMAPE+I YD D++S
Sbjct: 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFS 207
Query: 167 LGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
GI E+ D P F + + P P F RC +PE+R
Sbjct: 208 FGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKR 267
Query: 227 AT 228
+
Sbjct: 268 PS 269
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 41/238 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M + P +VK+YG K ++IV EY G + + +R K L ++ + D +G
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG 116
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ +L + IHRD L A N L++ +
Sbjct: 117 MAFLESHQFIHRD---------------------------------LAARNCLVDRDLCV 143
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K++DFG+ + D + + +GT F W APEV Y +D+W+ GI E+ +
Sbjct: 144 KVSDFGMTRYVLDD--QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSL 201
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
GK PY D++ + + ++ +R P + + + C + PE+R T ++L+
Sbjct: 202 GKMPY-DLYTNSEVVLKVSQGHRLYR-PHLASDTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 49/240 (20%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P+++K Y TD ++VMEY G + D + + + E E + L ++Y H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+HRD LK N+LL+ +AK+ADFG
Sbjct: 130 HMVVHRD---------------------------------LKPENVLLDAHMNAKIADFG 156
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGDIH 185
++ ++D R++ G+P + APEVI Y D+WS G+ + G P+ D H
Sbjct: 157 LSNMMSDGEFLRDSC-GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFID-----FVSRCLVKNPEERATASEMLNHEFIQR 240
+PT R + PE+++ + L +P +RAT ++ HE+ ++
Sbjct: 216 -------VPTL-FKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 65 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 124 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 150
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 151 KLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 211 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 49/240 (20%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P+++K Y TD ++VMEY G + D + + + E E + L ++Y H
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+HRD LK N+LL+ +AK+ADFG
Sbjct: 130 HMVVHRD---------------------------------LKPENVLLDAHMNAKIADFG 156
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGDIH 185
++ ++D R T G+P + APEVI Y D+WS G+ + G P+ D H
Sbjct: 157 LSNMMSDGEFLR-TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFID-----FVSRCLVKNPEERATASEMLNHEFIQR 240
+PT R + PE+++ + L +P +RAT ++ HE+ ++
Sbjct: 216 -------VPTL-FKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 44/247 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q D P ++K Y + ++V E G + D + RK+ SE + A I+ L G
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSG 138
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT---E 117
+ Y+H + +HRD LK N+LL + +
Sbjct: 139 ITYMHKNKIVHRD---------------------------------LKPENLLLESKSKD 165
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
+ ++ DFG++ + K IGT +++APEV+ YD D+WS G+ + G
Sbjct: 166 ANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLN 234
PP+ + + + K +F P W + D + + L P R +A + L+
Sbjct: 224 CPPFNGANEYDILKKVE-KGKYTFELPQ-WKKVSESAKDLIRKMLTYVPSMRISARDALD 281
Query: 235 HEFIQRH 241
HE+IQ +
Sbjct: 282 HEWIQTY 288
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ + P +V Y L+++M+ G + D + + K +E + + ++ L
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQVLDA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YLH +HRD+K N +Y + L+ +
Sbjct: 129 VKYLHDLGIVHRDLKP--------------------ENLLYYS----------LDEDSKI 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++DFG++ ++ D + +T GTP ++APEV+ + Y D WS+G+ A + G PP
Sbjct: 159 MISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 181 YGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ D + + +F K F P D + DF+ + K+PE+R T + L H +I
Sbjct: 218 FYDENDAK-LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q D P ++K Y + ++V E G + D + RK+ SE + A I+ L G
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSG 162
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT---E 117
+ Y+H + +HRD LK N+LL + +
Sbjct: 163 ITYMHKNKIVHRD---------------------------------LKPENLLLESKSKD 189
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
+ ++ DFG++ + K IGT +++APEV+ YD D+WS G+ + G
Sbjct: 190 ANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 247
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLN 234
PP+ + + + K +F P W + D + + L P R +A + L+
Sbjct: 248 CPPFNGANEYDILKKVE-KGKYTFELPQ-WKKVSESAKDLIRKMLTYVPSMRISARDALD 305
Query: 235 HEFIQ 239
HE+IQ
Sbjct: 306 HEWIQ 310
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q D P ++K Y + ++V E G + D + RK+ SE + A I+ L G
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSG 161
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT---E 117
+ Y+H + +HRD LK N+LL + +
Sbjct: 162 ITYMHKNKIVHRD---------------------------------LKPENLLLESKSKD 188
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
+ ++ DFG++ + K IGT +++APEV+ YD D+WS G+ + G
Sbjct: 189 ANIRIIDFGLSTHF-EASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 246
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLN 234
PP+ + + + K +F P W + D + + L P R +A + L+
Sbjct: 247 CPPFNGANEYDILKKVE-KGKYTFELPQ-WKKVSESAKDLIRKMLTYVPSMRISARDALD 304
Query: 235 HEFIQ 239
HE+IQ
Sbjct: 305 HEWIQ 309
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 34/181 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++ P++V + S+ L+ V++Y G + ++ R++ E +
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ-RERCFLEPRARFYAAEIASA 151
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YLH ++RD LK NILL+++GH
Sbjct: 152 LGYLHSLNIVYRD---------------------------------LKPENILLDSQGHI 178
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
L DFG+ + + + +T GTP ++APEV+ + YD D W LG EM G PP
Sbjct: 179 VLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
Query: 181 Y 181
+
Sbjct: 239 F 239
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ + P +V Y L+++M+ G + D + + K +E + + ++ L
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQVLDA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YLH +HRD+K N +Y + L+ +
Sbjct: 129 VKYLHDLGIVHRDLKP--------------------ENLLYYS----------LDEDSKI 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++DFG++ ++ D + +T GTP ++APEV+ + Y D WS+G+ A + G PP
Sbjct: 159 MISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 181 YGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ D + + +F K F P D + DF+ + K+PE+R T + L H +I
Sbjct: 218 FYDENDAK-LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ + P +V Y L+++M+ G + D + + K +E + + ++ L
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQVLDA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YLH +HRD+K N +Y + L+ +
Sbjct: 129 VKYLHDLGIVHRDLKP--------------------ENLLYYS----------LDEDSKI 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++DFG++ ++ D + +T GTP ++APEV+ + Y D WS+G+ A + G PP
Sbjct: 159 MISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 181 YGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ D + + +F K F P D + DF+ + K+PE+R T + L H +I
Sbjct: 218 FYDENDAK-LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 58/246 (23%)
Query: 18 KNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAG 77
+ T L +V E+ + + ++ + + + I ++ L+GL++LH R +HRD
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD---- 145
Query: 78 SGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAK 137
LK NIL+ + G KLADFG+A + MA
Sbjct: 146 -----------------------------LKPQNILVTSSGQIKLADFGLARIYSFQMAL 176
Query: 138 RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY---GDIHPMRAIFMIP 194
+ V+ T ++ APEV+ + Y D+WS+G EM KP + D+ + I +
Sbjct: 177 TSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 195 TKPPPSFREPDVWTP-------------EFI--------DFVSRCLVKNPEERATASEML 233
P DV P +F+ D + +CL NP +R +A L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 234 NHEFIQ 239
+H + Q
Sbjct: 296 SHPYFQ 301
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 103/252 (40%), Gaps = 63/252 (25%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +V++ T L IVMEY G + + + SEDE + G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG--HAKLAD 124
+ HRD LK N LL+ K+AD
Sbjct: 134 MQVAHRD---------------------------------LKLENTLLDGSPAPRLKIAD 160
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGD 183
FG + + + ++ + +GTP ++APEV+ + YD VAD+WS G+T M G P+ D
Sbjct: 161 FGYS-KASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Query: 184 IHPMRAIFMIPTKPPPSFRE------------PDV--WTPEFIDFVSRCLVKNPEERATA 229
+ P +FR+ PD +PE +SR V +P +R +
Sbjct: 220 -----------PEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 268
Query: 230 SEMLNHEFIQRH 241
E+ NHE+ ++
Sbjct: 269 PEIRNHEWFLKN 280
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 43/236 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L++VMEY G V D + + + E E +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSA 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H + +HRD LKA N+LL+ + +
Sbjct: 126 VQYCHQKFIVHRD---------------------------------LKAENLLLDADMNI 152
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K +T G+P + APE+ Q YD D+WSLG+ + G
Sbjct: 153 KIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 180 PYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ ++ +R + +R P + + + + + L+ NP +R T +++
Sbjct: 212 PFDGQNLKELRERVL-----RGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 35/240 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+ + P +V Y L+++M+ G + D + + K +E + + ++ L
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI-VEKGFYTERDASRLIFQVLDA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YLH +HRD+K N +Y + L+ +
Sbjct: 129 VKYLHDLGIVHRDLKP--------------------ENLLYYS----------LDEDSKI 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
++DFG++ ++ D + +T GTP ++APEV+ + Y D WS+G+ A + G PP
Sbjct: 159 MISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
Query: 181 YGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ D + + +F K F P D + DF+ + K+PE+R T + L H +I
Sbjct: 218 FYDENDAK-LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 43/236 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L++VMEY G V D + + + E E +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSA 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H + +HRD LKA N+LL+ + +
Sbjct: 126 VQYCHQKFIVHRD---------------------------------LKAENLLLDADMNI 152
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K +T G+P + APE+ Q YD D+WSLG+ + G
Sbjct: 153 KIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 180 PYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ ++ +R + +R P + + + + + L+ NP +R T +++
Sbjct: 212 PFDGQNLKELRERVL-----RGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 43/236 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L++VMEY G V D + + + E E +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSA 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H + +HRD LKA N+LL+ + +
Sbjct: 126 VQYCHQKFIVHRD---------------------------------LKAENLLLDADMNI 152
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K +T G+P + APE+ Q YD D+WSLG+ + G
Sbjct: 153 KIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 180 PYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ ++ +R + +R P + + + + + L+ NP +R T +++
Sbjct: 212 PFDGQNLKELRERVL-----RGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 58/246 (23%)
Query: 18 KNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAG 77
+ T L +V E+ + + ++ + + + I ++ L+GL++LH R +HRD
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD---- 145
Query: 78 SGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAK 137
LK NIL+ + G KLADFG+A + MA
Sbjct: 146 -----------------------------LKPQNILVTSSGQIKLADFGLARIYSFQMAL 176
Query: 138 RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY---GDIHPMRAIFMIP 194
+ V+ T ++ APEV+ + Y D+WS+G EM KP + D+ + I +
Sbjct: 177 TSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 195 TKPPPSFREPDVWTP-------------EFI--------DFVSRCLVKNPEERATASEML 233
P DV P +F+ D + +CL NP +R +A L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 234 NHEFIQ 239
+H + Q
Sbjct: 296 SHPYFQ 301
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 102/243 (41%), Gaps = 34/243 (13%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P ++ Y +++V E G + D + LR+K SE E + +L K +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKI-LRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD+K + L+ ++GN ++ DFG
Sbjct: 135 QGVVHRDLKPSN------------------------ILYVDESGN-----PESIRICDFG 165
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYG---D 183
A QL T T ++APEV++ GYD D+WSLG+ G P+ D
Sbjct: 166 FAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD 225
Query: 184 IHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHD 242
P + I + K S + + D VS+ L +P +R TA+ +L H +I D
Sbjct: 226 DTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWD 285
Query: 243 TDP 245
P
Sbjct: 286 QLP 288
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 38/174 (21%)
Query: 6 SPYVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEY 63
S ++VKY G + L +VMEY +G + D ++ + L + KG+EY
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
L RR +HRD L A NIL+ +E H K+A
Sbjct: 130 LGSRRCVHRD---------------------------------LAARNILVESEAHVKIA 156
Query: 124 DFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
DFG+A L D R FW APE + + + +D+WS G+ E+
Sbjct: 157 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 38/174 (21%)
Query: 6 SPYVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEY 63
S ++VKY G + L +VMEY +G + D ++ + L + KG+EY
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
L RR +HRD L A NIL+ +E H K+A
Sbjct: 131 LGSRRCVHRD---------------------------------LAARNILVESEAHVKIA 157
Query: 124 DFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
DFG+A L D R FW APE + + + +D+WS G+ E+
Sbjct: 158 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 93 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 152 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 178
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 179 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 238
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 239 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 38/174 (21%)
Query: 6 SPYVVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEY 63
S ++VKY G + L +VMEY +G + D ++ + L + KG+EY
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
L RR +HRD L A NIL+ +E H K+A
Sbjct: 143 LGSRRCVHRD---------------------------------LAARNILVESEAHVKIA 169
Query: 124 DFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
DFG+A L D R FW APE + + + +D+WS G+ E+
Sbjct: 170 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 65 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 124 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 150
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 151 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 211 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 58/246 (23%)
Query: 18 KNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAG 77
+ T L +V E+ + + ++ + + + I ++ L+GL++LH R +HRD
Sbjct: 90 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD---- 145
Query: 78 SGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAK 137
LK NIL+ + G KLADFG+A + MA
Sbjct: 146 -----------------------------LKPQNILVTSSGQIKLADFGLARIYSFQMAL 176
Query: 138 RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY---GDIHPMRAIFMIP 194
+ V+ T ++ APEV+ + Y D+WS+G EM KP + D+ + I +
Sbjct: 177 TSVVV-TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
Query: 195 TKPPPSFREPDVWTP-------------EFI--------DFVSRCLVKNPEERATASEML 233
P DV P +F+ D + +CL NP +R +A L
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 234 NHEFIQ 239
+H + Q
Sbjct: 296 SHPYFQ 301
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 65 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 124 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 150
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 151 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 211 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 70 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 129 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 155
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 156 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 215
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 216 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 103/245 (42%), Gaps = 44/245 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q D P + K Y + ++V E G + D + RK+ SE + A I+ L G
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSG 138
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT---E 117
+ Y H + +HRD LK N+LL + +
Sbjct: 139 ITYXHKNKIVHRD---------------------------------LKPENLLLESKSKD 165
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
+ ++ DFG++ + K IGT +++APEV+ YD D+WS G+ + G
Sbjct: 166 ANIRIIDFGLSTHF-EASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLN 234
PP+ + + + K +F P W + D + + L P R +A + L+
Sbjct: 224 CPPFNGANEYDILKKVE-KGKYTFELPQ-WKKVSESAKDLIRKXLTYVPSXRISARDALD 281
Query: 235 HEFIQ 239
HE+IQ
Sbjct: 282 HEWIQ 286
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 68 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 127 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 153
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 154 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 213
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 214 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 62 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 121 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 147
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 148 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 207
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 208 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 67 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 126 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 152
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 153 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 212
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 213 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 44/245 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++ D P ++K Y + + ++VME G + D + R K +E + A I+ L G
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLSG 148
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT---E 117
+ YLH +HRD LK N+LL + +
Sbjct: 149 VTYLHKHNIVHRD---------------------------------LKPENLLLESKEKD 175
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
K+ DFG++ + + K +GT +++APEV+++ YD D+WS+G+ + G
Sbjct: 176 ALIKIVDFGLSA-VFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLN 234
PP+G + I K +F P+ W + D + + L + + R +A + L
Sbjct: 234 YPPFGG-QTDQEILRKVEKGKYTFDSPE-WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291
Query: 235 HEFIQ 239
H +I+
Sbjct: 292 HPWIK 296
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 107 LKAGNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
LK N+LL ++ KLADFG+A ++ GTP +++PEV+++ Y D
Sbjct: 147 LKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVD 206
Query: 164 MWSLGITALEMAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCL 219
+W+ G+ + G PP+ D R I P P E D TPE D +++ L
Sbjct: 207 LWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSP---EWDTVTPEAKDLINKML 263
Query: 220 VKNPEERATASEMLNHEFIQRHDTDPS 246
NP +R TA+E L H +I T S
Sbjct: 264 TINPSKRITAAEALKHPWISHRSTVAS 290
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 445 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L+++
Sbjct: 504 LAYLESKRFVHRDI---------------------------------AARNVLVSSNDCV 530
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 531 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 591 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 48/252 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ D P ++K + ++ +IV E G + D + +++K SE + A I+ G
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQVFSG 133
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
+ Y+H +HRD LK NILL ++
Sbjct: 134 ITYMHKHNIVHRD---------------------------------LKPENILLESKEKD 160
Query: 120 --AKLADFGVAG--QLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
K+ DFG++ Q M R IGT +++APEV++ YD D+WS G+ +
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILL 216
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEM 232
G PP+ + + + T +F P W + + D + + L +P R TA++
Sbjct: 217 SGTPPFYGKNEYDILKRVET-GKYAFDLPQ-WRTISDDAKDLIRKMLTFHPSLRITATQC 274
Query: 233 LNHEFIQRHDTD 244
L H +IQ++ ++
Sbjct: 275 LEHPWIQKYSSE 286
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 48/252 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ D P ++K + ++ +IV E G + D + +++K SE + A I+ G
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQVFSG 133
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
+ Y+H +HRD LK NILL ++
Sbjct: 134 ITYMHKHNIVHRD---------------------------------LKPENILLESKEKD 160
Query: 120 --AKLADFGVAG--QLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
K+ DFG++ Q M R IGT +++APEV++ YD D+WS G+ +
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILL 216
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEM 232
G PP+ + + + T +F P W + + D + + L +P R TA++
Sbjct: 217 SGTPPFYGKNEYDILKRVET-GKYAFDLPQ-WRTISDDAKDLIRKMLTFHPSLRITATQC 274
Query: 233 LNHEFIQRHDTD 244
L H +IQ++ ++
Sbjct: 275 LEHPWIQKYSSE 286
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 23 WIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLV 82
+IVMEY ++ DI+ + I ++ D + L + H IHRD+K
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADACQALNFSHQNGIIHRDVKPA----- 162
Query: 83 YDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRN 139
NI+++ K+ DFG+A + D+ + +
Sbjct: 163 ----------------------------NIMISATNAVKVMDFGIARAIADSGNSVTQTA 194
Query: 140 TVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFM-IPTKP- 197
VIGT +++PE + D +D++SLG E+ G+PP+ P+ + + P
Sbjct: 195 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI 254
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEER-ATASEM 232
PPS R + + + V + L KNPE R TA+EM
Sbjct: 255 PPSARH-EGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 107 LKAGNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
LK N+LL ++ KLADFG+A ++ GTP +++PEV+++ Y D
Sbjct: 136 LKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVD 195
Query: 164 MWSLGITALEMAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCL 219
+W+ G+ + G PP+ D R I P P E D TPE D +++ L
Sbjct: 196 LWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSP---EWDTVTPEAKDLINKML 252
Query: 220 VKNPEERATASEMLNHEFIQRHDTDPS 246
NP +R TA+E L H +I T S
Sbjct: 253 TINPSKRITAAEALKHPWISHRSTVAS 279
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 34/243 (13%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P ++ Y +++V E G + D + LR+K SE E + +L K +EYLH
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKI-LRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD+K + L+ ++GN ++ DFG
Sbjct: 140 QGVVHRDLKPSN------------------------ILYVDESGNPEC-----LRICDFG 170
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD--- 183
A QL T T ++APEV++ GYD D+WSLGI M G P+ +
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 184 IHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHD 242
P + I + K S + + D VS+ L +P +R TA ++L H ++ + D
Sbjct: 231 DTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
Query: 243 TDP 245
P
Sbjct: 291 KLP 293
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 43/236 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L++VMEY G V D + + + E E +
Sbjct: 60 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGWMKEKEARAKFRQIVSA 118
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H + +HRD LKA N+LL+ + +
Sbjct: 119 VQYCHQKFIVHRD---------------------------------LKAENLLLDADMNI 145
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K +T G+P + APE+ Q YD D+WSLG+ + G
Sbjct: 146 KIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
Query: 180 PYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ ++ +R + +R P + + + + + L+ NP +R T +++
Sbjct: 205 PFDGQNLKELRERVL-----RGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 255
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 51/257 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 83 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 140
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 141 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAIL-------------------- 173
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 174 ---KLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 230 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 285
Query: 229 ASEMLNHEFIQRHDTDP 245
+E +NH +I + P
Sbjct: 286 ITEFMNHPWIMQSTKVP 302
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 75 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 132
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 133 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 164
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 165 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 222 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 277
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 278 ITEFMNHPWIMQSTKVPQ 295
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 34/243 (13%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P ++ Y +++V E G + D + LR+K SE E + +L K +EYLH
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKI-LRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD+K + L+ ++GN ++ DFG
Sbjct: 140 QGVVHRDLKPSN------------------------ILYVDESGN-----PECLRICDFG 170
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD--- 183
A QL T T ++APEV++ GYD D+WSLGI M G P+ +
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 184 IHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHD 242
P + I + K S + + D VS+ L +P +R TA ++L H ++ + D
Sbjct: 231 DTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290
Query: 243 TDP 245
P
Sbjct: 291 KLP 293
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 73 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 130
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 131 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 162
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 163 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 220 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 275
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 276 ITEFMNHPWIMQSTKVPQ 293
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 113 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 170
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 171 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 202
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 203 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 260 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 315
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 316 ITEFMNHPWIMQSTKVPQ 333
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 74 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 131
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 132 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 163
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 164 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 221 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 276
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 277 ITEFMNHPWIMQSTKVPQ 294
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 51/257 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 119 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 176
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 177 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 208
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 209 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 266 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 321
Query: 229 ASEMLNHEFIQRHDTDP 245
+E +NH +I + P
Sbjct: 322 ITEFMNHPWIMQSTKVP 338
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M + P +V+ YG + + +V E+ G +SD +R ++ + + + + D +G
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 115
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL IHRD+ A + C V NQ+
Sbjct: 116 MAYLEEASVIHRDLAARN--------------CLVGENQV-------------------I 142
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K++DFG+ + D +T GT F W +PEV Y +D+WS G+ E+ +E
Sbjct: 143 KVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 200
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
GK PY + + I T FR +P + + ++ C + PE+R S +L
Sbjct: 201 GKIPYENRSNSEVVEDIST----GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 256
Query: 235 H 235
Sbjct: 257 Q 257
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 48/252 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ D P ++K + ++ +IV E G + D + +++K SE + A I+ G
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-IKRKRFSEHDAARIIKQVFSG 133
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH- 119
+ Y+H +HRD LK NILL ++
Sbjct: 134 ITYMHKHNIVHRD---------------------------------LKPENILLESKEKD 160
Query: 120 --AKLADFGVAG--QLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
K+ DFG++ Q M R IGT +++APEV++ YD D+WS G+ +
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILL 216
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEM 232
G PP+ + + + T +F P W + + D + + L +P R TA++
Sbjct: 217 SGTPPFYGKNEYDILKRVET-GKYAFDLPQ-WRTISDDAKDLIRKMLTFHPSLRITATQC 274
Query: 233 LNHEFIQRHDTD 244
L H +IQ++ ++
Sbjct: 275 LEHPWIQKYSSE 286
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 69 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 127 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 158
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 159 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 216 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 271
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 272 ITEFMNHPWIMQSTKVPQ 289
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 65 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L++
Sbjct: 124 LAYLESKRFVHRDI---------------------------------AARNVLVSATDCV 150
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 151 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 211 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 67 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 124
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 125 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 156
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 157 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 214 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 269
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 270 ITEFMNHPWIMQSTKVPQ 287
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 68 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 125
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 126 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 157
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 158 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 215 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 270
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 271 ITEFMNHPWIMQSTKVPQ 288
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 40/186 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M +SP+VV+ + ++ + L++VMEY G + ++M + E + +
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS--NYDVPEKWAKFYTAEVVLA 186
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+ +H IHRD+K N+LL+ GH
Sbjct: 187 LDAIHSMGLIHRDVKPD---------------------------------NMLLDKHGHL 213
Query: 121 KLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQEIG----YDCVADMWSLGITALEMA 175
KLADFG ++ +T M +T +GTP +++PEV++ G Y D WS+G+ EM
Sbjct: 214 KLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
Query: 176 EGKPPY 181
G P+
Sbjct: 274 VGDTPF 279
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 48/228 (21%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED--EIATILCDTL---KGLEYLHLRRKI 70
L +++E+C G++S +R ++ K L +D + ++C + KG+E+L R+ I
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXI 166
Query: 71 HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQ 130
HRD L A NILL+ + K+ DFG+A
Sbjct: 167 HRD---------------------------------LAARNILLSEKNVVKICDFGLARD 193
Query: 131 L-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPM 187
+ D R P WMAPE I + Y +D+WS G+ E+ + G PY + +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-I 252
Query: 188 RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
F K R PD TPE + C P +R T SE++ H
Sbjct: 253 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 92/228 (40%), Gaps = 48/228 (21%)
Query: 22 LWIVMEYCGAGSVSDIMR-----------LRKKTLSEDEIATILCDTLKGLEYLHLRRKI 70
L +++E+C G++S +R L K L+ + + KG+E+L R+ I
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI 166
Query: 71 HRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQ 130
HRD L A NILL+ + K+ DFG+A
Sbjct: 167 HRD---------------------------------LAARNILLSEKNVVKIXDFGLARD 193
Query: 131 L-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPM 187
+ D R P WMAPE I + Y +D+WS G+ E+ + G PY + +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-I 252
Query: 188 RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
F K R PD TPE + C P +R T SE++ H
Sbjct: 253 DEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 69 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 127 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 158
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD DMWSLG+ + G
Sbjct: 159 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 216 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 271
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 272 ITEFMNHPWIMQSTKVPQ 289
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 38/234 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+Q D P++VK G +N +WI+ME C G + +++RK +L +
Sbjct: 445 MRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L YL +R +HRDI A N+L++
Sbjct: 504 LAYLESKRFVHRDI---------------------------------AARNVLVSATDCV 530
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D+ + + P WMAPE I + +D+W G+ E + G
Sbjct: 531 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ + I I P P +++C +P R +E+
Sbjct: 591 KPFQGVKNNDVIGRIENG--ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 38/179 (21%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL--CDTLKGLE 62
+ P++ + + + L+ VME+ G D+M +K+ DE + + L
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAEIISALM 138
Query: 63 YLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKL 122
+LH + I+RD LK N+LL+ EGH KL
Sbjct: 139 FLHDKGIIYRD---------------------------------LKLDNVLLDHEGHCKL 165
Query: 123 ADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
ADFG+ + T GTP ++APE++QE+ Y D W++G+ EM G P+
Sbjct: 166 ADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 52/209 (24%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
DS ++ + ++ + +L++VM+Y G + ++ + L E+ L + + ++ +
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H +HRDIK NIL++ GH +LAD
Sbjct: 192 HQLHYVHRDIKPD---------------------------------NILMDMNGHIRLAD 218
Query: 125 FGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEI-------GYDCVADMWSLGITALEMAE 176
FG +L D + + +GTP +++PE++Q + G +C D WSLG+ EM
Sbjct: 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPEC--DWWSLGVCMYEMLY 276
Query: 177 GKPP---------YGDIHPMRAIFMIPTK 196
G+ P YG I + F PT+
Sbjct: 277 GETPFYAESLVETYGKIMNHKERFQFPTQ 305
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 63/252 (25%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +V++ T L IVMEY G + + + SEDE + G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG--HAKLAD 124
+ HRD LK N LL+ K+ D
Sbjct: 134 MQVCHRD---------------------------------LKLENTLLDGSPAPRLKICD 160
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGD 183
FG + ++TV GTP ++APEV+ + YD VAD+WS G+T M G P+ D
Sbjct: 161 FGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Query: 184 IHPMRAIFMIPTKPPPSFRE------------PDV--WTPEFIDFVSRCLVKNPEERATA 229
+ P +FR+ PD +PE +SR V +P +R +
Sbjct: 220 -----------PEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 268
Query: 230 SEMLNHEFIQRH 241
E+ NHE+ ++
Sbjct: 269 PEIRNHEWFLKN 280
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 69/254 (27%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 130 DVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------- 179
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK N+ +N + K+ DFG+A D M
Sbjct: 180 --------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG--- 210
Query: 141 VIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTK 196
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I+ ++ I +
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 197 PPPSF--REP--------------------DVW---TPEFIDFVSRCLVKNPEERATASE 231
PP S R P DV+ P +D + + LV + ++R TASE
Sbjct: 271 PPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASE 330
Query: 232 MLNHE-FIQRHDTD 244
L H F Q HD D
Sbjct: 331 ALAHPYFSQYHDPD 344
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 101/242 (41%), Gaps = 39/242 (16%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYC-GAGSVSDIMRLRKKTL--SEDEIATILCDTLKGLEY 63
P++V+ +Y + L++V E+ GA +I++ SE + + L+ L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA--- 120
H IHRD+K N+LL ++ ++
Sbjct: 146 CHDNNIIHRDVKPE---------------------------------NVLLASKENSAPV 172
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFGVA QL ++ +GTP +MAPEV++ Y D+W G+ + G P
Sbjct: 173 KLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
Query: 181 YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
+ +I K + R+ + D V R L+ +P ER T E LNH +++
Sbjct: 233 FYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
Query: 241 HD 242
D
Sbjct: 293 RD 294
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M + P +V+ YG + + +V E+ G +SD +R ++ + + + + D +G
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 115
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL IHRD+ A + C V NQ+
Sbjct: 116 MAYLEEACVIHRDLAARN--------------CLVGENQV-------------------I 142
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K++DFG+ + D +T GT F W +PEV Y +D+WS G+ E+ +E
Sbjct: 143 KVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 200
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
GK PY + + I T FR +P + + ++ C + PE+R S +L
Sbjct: 201 GKIPYENRSNSEVVEDIST----GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 256
Query: 235 H 235
Sbjct: 257 Q 257
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 43/236 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L++VMEY G V D + + + E E +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSA 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H + +HRD LKA N+LL+ + +
Sbjct: 126 VQYCHQKFIVHRD---------------------------------LKAENLLLDADMNI 152
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K + G+P + APE+ Q YD D+WSLG+ + G
Sbjct: 153 KIADFGFSNEFT-FGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 180 PYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ ++ +R + +R P + + + + + L+ NP +R T +++
Sbjct: 212 PFDGQNLKELRERVL-----RGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M + P +V+ YG + + +V E+ G +SD +R ++ + + + + D +G
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 113
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL IHRD+ A + C V NQ+
Sbjct: 114 MAYLEEACVIHRDLAARN--------------CLVGENQV-------------------I 140
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K++DFG+ + D +T GT F W +PEV Y +D+WS G+ E+ +E
Sbjct: 141 KVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 198
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
GK PY + + I T FR +P + + ++ C + PE+R S +L
Sbjct: 199 GKIPYENRSNSEVVEDIST----GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 254
Query: 235 H 235
Sbjct: 255 Q 255
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M + P +V+ YG + + +V E+ G +SD +R ++ + + + + D +G
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 135
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL IHRD+ A + C V NQ+
Sbjct: 136 MAYLEEACVIHRDLAARN--------------CLVGENQV-------------------I 162
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K++DFG+ + D +T GT F W +PEV Y +D+WS G+ E+ +E
Sbjct: 163 KVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 220
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
GK PY + + I T FR +P + + ++ C + PE+R S +L
Sbjct: 221 GKIPYENRSNSEVVEDIST----GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 276
Query: 235 H 235
Sbjct: 277 Q 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 100/252 (39%), Gaps = 63/252 (25%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +V++ T L IVMEY G + + + SEDE + G+ Y H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG--HAKLAD 124
+ HRD LK N LL+ K+ D
Sbjct: 133 MQVCHRD---------------------------------LKLENTLLDGSPAPRLKICD 159
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGD 183
FG + ++TV GTP ++APEV+ + YD VAD+WS G+T M G P+ D
Sbjct: 160 FGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
Query: 184 IHPMRAIFMIPTKPPPSFRE------------PDV--WTPEFIDFVSRCLVKNPEERATA 229
+ P +FR+ PD +PE +SR V +P +R +
Sbjct: 219 -----------PEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 267
Query: 230 SEMLNHEFIQRH 241
E+ NHE+ ++
Sbjct: 268 PEIRNHEWFLKN 279
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 43/236 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L++VMEY G V D + + + E E +
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEARAKFRQIVSA 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H + +HRD LKA N+LL+ + +
Sbjct: 126 VQYCHQKFIVHRD---------------------------------LKAENLLLDADMNI 152
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K + G P + APE+ Q YD D+WSLG+ + G
Sbjct: 153 KIADFGFSNEFT-FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 180 PYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ ++ +R + +R P + + + + + L+ NP +R T +++
Sbjct: 212 PFDGQNLKELRERVL-----RGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M + P +V+ YG + + +V E+ G +SD +R ++ + + + + D +G
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 118
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL IHRD+ A + C V NQ+
Sbjct: 119 MAYLEEACVIHRDLAARN--------------CLVGENQV-------------------I 145
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K++DFG+ + D +T GT F W +PEV Y +D+WS G+ E+ +E
Sbjct: 146 KVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 203
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
GK PY + + I T FR +P + + ++ C + PE+R S +L
Sbjct: 204 GKIPYENRSNSEVVEDIST----GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 259
Query: 235 H 235
Sbjct: 260 Q 260
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 92/230 (40%), Gaps = 50/230 (21%)
Query: 22 LWIVMEYCGAGSVSDIMR-------------LRKKTLSEDEIATILCDTLKGLEYLHLRR 68
L +++E+C G++S +R L K L+ + + KG+E+L R+
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK 168
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
IHRD L A NILL+ + K+ DFG+A
Sbjct: 169 XIHRD---------------------------------LAARNILLSEKNVVKICDFGLA 195
Query: 129 GQLT-DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIH 185
+ D R P WMAPE I + Y +D+WS G+ E+ + G PY +
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ F K R PD TPE + C P +R T SE++ H
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMRLRKKTLSEDEIATIL--CDT 57
+ + S ++V ++ TDL +VM G + I + + E I
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ GLE+LH R I+RD LK N+LL+ +
Sbjct: 299 VSGLEHLHQRNIIYRD---------------------------------LKPENVLLDDD 325
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
G+ +++D G+A +L K GTP +MAPE++ YD D ++LG+T EM
Sbjct: 326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 178 KPPY---GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
+ P+ G+ + + + ++ PD ++P DF L K+PE+R
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTY--PDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMRLRKKTLSEDEIATIL--CDT 57
+ + S ++V ++ TDL +VM G + I + + E I
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ GLE+LH R I+RD LK N+LL+ +
Sbjct: 299 VSGLEHLHQRNIIYRD---------------------------------LKPENVLLDDD 325
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
G+ +++D G+A +L K GTP +MAPE++ YD D ++LG+T EM
Sbjct: 326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 178 KPPY---GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
+ P+ G+ + + + ++ PD ++P DF L K+PE+R
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTY--PDKFSPASKDFCEALLQKDPEKR 435
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMRLRKKTLSEDEIATIL--CDT 57
+ + S ++V ++ TDL +VM G + I + + E I
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ GLE+LH R I+RD LK N+LL+ +
Sbjct: 299 VSGLEHLHQRNIIYRD---------------------------------LKPENVLLDDD 325
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
G+ +++D G+A +L K GTP +MAPE++ YD D ++LG+T EM
Sbjct: 326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 178 KPPY---GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
+ P+ G+ + + + ++ PD ++P DF L K+PE+R
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTY--PDKFSPASKDFCEALLQKDPEKR 435
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 41/232 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMRLRKKTLSEDEIATIL--CDT 57
+ + S ++V ++ TDL +VM G + I + + E I
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ GLE+LH R I+RD LK N+LL+ +
Sbjct: 299 VSGLEHLHQRNIIYRD---------------------------------LKPENVLLDDD 325
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
G+ +++D G+A +L K GTP +MAPE++ YD D ++LG+T EM
Sbjct: 326 GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
Query: 178 KPPY---GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
+ P+ G+ + + + ++ PD ++P DF L K+PE+R
Sbjct: 386 RGPFRARGEKVENKELKQRVLEQAVTY--PDKFSPASKDFCEALLQKDPEKR 435
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 45/241 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M + P +V+ YG + + +V E+ G +SD +R ++ + + + + D +G
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 116
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL IHRD+ A + C V NQ+
Sbjct: 117 MAYLEEACVIHRDLAARN--------------CLVGENQV-------------------I 143
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K++DFG+ + D +T GT F W +PEV Y +D+WS G+ E+ +E
Sbjct: 144 KVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 201
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
GK PY + + I T FR +P + + ++ C + PE+R S +L
Sbjct: 202 GKIPYENRSNSEVVEDIST----GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257
Query: 235 H 235
Sbjct: 258 Q 258
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 103/251 (41%), Gaps = 45/251 (17%)
Query: 5 DSPYVVKYYGSYFKNTD-LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEY 63
D P + S F+ D L+ VMEY G + ++ K E + + GL +
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISIGLFF 135
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
LH R I+RD LK N++L++EGH K+A
Sbjct: 136 LHKRGIIYRD---------------------------------LKLDNVMLDSEGHIKIA 162
Query: 124 DFGVAGQ-LTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYG 182
DFG+ + + D + R GTP ++APE+I Y D W+ G+ EM G+PP+
Sbjct: 163 DFGMCKEHMMDGVTTRE-FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF- 220
Query: 183 DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS-----EMLNHEF 237
D +F + S+ P + E + + K+P +R ++ H F
Sbjct: 221 DGEDEDELFQSIMEHNVSY--PKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAF 278
Query: 238 IQRHDTDPSQN 248
+R D + +N
Sbjct: 279 FRRIDWEKLEN 289
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 43/247 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D +++ Y ++ D+ +VMEY G + D + L+E + + +G
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEG 199
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL-LNTEG- 118
+ ++H Q+Y LK NIL +N +
Sbjct: 200 IRHMH---------------------------------QMYILHLDLKPENILCVNRDAK 226
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA---DMWSLGITALEMA 175
K+ DFG+A + K GTP ++APEV + YD V+ DMWS+G+ A +
Sbjct: 227 QIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEV---VNYDFVSFPTDMWSVGVIAYMLL 282
Query: 176 EGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
G P+ GD ++ + E + E +F+S+ L+K R +ASE L
Sbjct: 283 SGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342
Query: 235 HEFIQRH 241
H ++ H
Sbjct: 343 HPWLSDH 349
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 34/252 (13%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++ D P ++K + + ++V E+ G + + + R K E + A I+ L G
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQILSG 158
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YLH +HRDIK N++ L+ N LLN
Sbjct: 159 ICYLHKHNIVHRDIKPE----------------NIL----------LENKNSLLNI---- 188
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
K+ DFG++ + R+ +GT +++APEV+++ Y+ D+WS G+ + G PP
Sbjct: 189 KIVDFGLSSFFSKDYKLRDR-LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
Query: 181 YGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
+G + I + K F + + E + + L + +R TA E LN +I+
Sbjct: 247 FGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306
Query: 240 RHDTDPSQNGGK 251
++ + +++ K
Sbjct: 307 KYANNINKSDQK 318
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 105/258 (40%), Gaps = 51/258 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 67 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 124
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 125 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 156
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + TP+++APEV+ YD DMWSLG+ + G
Sbjct: 157 --LKLTDFGFAKETTSHNSLTEPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 214 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 269
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 270 ITEFMNHPWIMQSTKVPQ 287
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L +++E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 98 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 158 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 184
Query: 127 VAGQLT-DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 245 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L +++E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 167 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 193
Query: 127 VAGQLT-DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 254 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L +++E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 167 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 193
Query: 127 VAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 194 LARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 254 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 40/186 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M +SP+VV+ + ++ + L++VMEY G + ++M + E + +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLA 185
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+ +H IHRD+K N+LL+ GH
Sbjct: 186 LDAIHSMGFIHRDVKPD---------------------------------NMLLDKSGHL 212
Query: 121 KLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIG----YDCVADMWSLGITALEMA 175
KLADFG ++ + M + +T +GTP +++PEV++ G Y D WS+G+ EM
Sbjct: 213 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
Query: 176 EGKPPY 181
G P+
Sbjct: 273 VGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 40/186 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M +SP+VV+ + ++ + L++VMEY G + ++M + E + +
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLA 180
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+ +H IHRD+K N+LL+ GH
Sbjct: 181 LDAIHSMGFIHRDVKPD---------------------------------NMLLDKSGHL 207
Query: 121 KLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIG----YDCVADMWSLGITALEMA 175
KLADFG ++ + M + +T +GTP +++PEV++ G Y D WS+G+ EM
Sbjct: 208 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
Query: 176 EGKPPY 181
G P+
Sbjct: 268 VGDTPF 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 40/186 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M +SP+VV+ + ++ + L++VMEY G + ++M + E + +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLA 185
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+ +H IHRD+K N+LL+ GH
Sbjct: 186 LDAIHSMGFIHRDVKPD---------------------------------NMLLDKSGHL 212
Query: 121 KLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIG----YDCVADMWSLGITALEMA 175
KLADFG ++ + M + +T +GTP +++PEV++ G Y D WS+G+ EM
Sbjct: 213 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
Query: 176 EGKPPY 181
G P+
Sbjct: 273 VGDTPF 278
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L +++E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 167 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 193
Query: 127 VAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 194 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 254 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L ++ E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 158 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 184
Query: 127 VAGQLT-DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 185 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 245 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 92/231 (39%), Gaps = 51/231 (22%)
Query: 22 LWIVMEYCGAGSVSDIMR--------------LRKKTLSEDEIATILCDTLKGLEYLHLR 67
L +++E+C G++S +R L K L+ + + KG+E+L R
Sbjct: 108 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 167
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
+ IHRD L A NILL+ + K+ DFG+
Sbjct: 168 KCIHRD---------------------------------LAARNILLSEKNVVKICDFGL 194
Query: 128 AGQLT-DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDI 184
A + D R P WMAPE I + Y +D+WS G+ E+ + G PY +
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 185 HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ F K R PD TPE + C P +R T SE++ H
Sbjct: 255 K-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L +++E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 203
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 204 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 230
Query: 127 VAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 231 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 291 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 61/269 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ +VK Y L +V E+ + ++ + + L + L L G
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNG 112
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ Y H RR +HRD LK N+L+N EG
Sbjct: 113 IAYCHDRRVLHRD---------------------------------LKPQNLLINREGEL 139
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEMAEGKP 179
K+ADFG+A + K I T ++ AP+V+ Y D+WS+G EM G P
Sbjct: 140 KIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP 199
Query: 180 PY---GDIHPMRAIFMIPTKPP----PSFREPDVWTPEF-------------------ID 213
+ + + IF I P P+ E + P F ID
Sbjct: 200 LFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGID 259
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQRHD 242
+S+ L +P +R TA + L H + + ++
Sbjct: 260 LLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L ++ E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 158 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 184
Query: 127 VAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 245 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L +++E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 109 LMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 168
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 169 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 195
Query: 127 VAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 196 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 256 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK------KTLSED------EIATILCDTL---KGLEYLHL 66
L ++ E+C G++S +R ++ K ED + ++C + KG+E+L
Sbjct: 98 LMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 157
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRD L A NILL+ + K+ DFG
Sbjct: 158 RKCIHRD---------------------------------LAARNILLSEKNVVKICDFG 184
Query: 127 VAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
+A + D R P WMAPE I + Y +D+WS G+ E+ + G PY
Sbjct: 185 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ + F K R PD TPE + C P +R T SE++ H
Sbjct: 245 VK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 36/182 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ + P +VK + L++VMEY G V D + + + E E +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSA 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++Y H + +HRD LKA N+LL+ + +
Sbjct: 127 VQYCHQKYIVHRD---------------------------------LKAENLLLDGDMNI 153
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKP 179
K+ADFG + + T K +T G+P + APE+ Q YD D+WSLG+ + G
Sbjct: 154 KIADFGFSNEFT-VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 180 PY 181
P+
Sbjct: 213 PF 214
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 102/269 (37%), Gaps = 61/269 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ +VK Y L +V E+ + ++ + + L + L L G
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNG 112
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ Y H RR +HRD LK N+L+N EG
Sbjct: 113 IAYCHDRRVLHRD---------------------------------LKPQNLLINREGEL 139
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEMAEGKP 179
K+ADFG+A + K + T ++ AP+V+ Y D+WS+G EM G P
Sbjct: 140 KIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAP 199
Query: 180 PY---GDIHPMRAIFMIPTKPP----PSFREPDVWTPEF-------------------ID 213
+ + + IF I P P+ E + P F ID
Sbjct: 200 LFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGID 259
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQRHD 242
+S+ L +P +R TA + L H + + ++
Sbjct: 260 LLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 102/269 (37%), Gaps = 61/269 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ +VK Y L +V E+ + ++ + + L + L L G
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNG 112
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ Y H RR +HRD LK N+L+N EG
Sbjct: 113 IAYCHDRRVLHRD---------------------------------LKPQNLLINREGEL 139
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEMAEGKP 179
K+ADFG+A + K + T ++ AP+V+ Y D+WS+G EM G P
Sbjct: 140 KIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP 199
Query: 180 PY---GDIHPMRAIFMIPTKPP----PSFREPDVWTPEF-------------------ID 213
+ + + IF I P P+ E + P F ID
Sbjct: 200 LFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGID 259
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQRHD 242
+S+ L +P +R TA + L H + + ++
Sbjct: 260 LLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 99/252 (39%), Gaps = 63/252 (25%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +V++ T L IVMEY G + + + SEDE + G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG--HAKLAD 124
+ HRD LK N LL+ K+
Sbjct: 134 MQVCHRD---------------------------------LKLENTLLDGSPAPRLKICA 160
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGD 183
FG + ++TV GTP ++APEV+ + YD VAD+WS G+T M G P+ D
Sbjct: 161 FGYSKSSVLHSQPKDTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Query: 184 IHPMRAIFMIPTKPPPSFRE------------PDV--WTPEFIDFVSRCLVKNPEERATA 229
+ P +FR+ PD +PE +SR V +P +R +
Sbjct: 220 -----------PEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 268
Query: 230 SEMLNHEFIQRH 241
E+ NHE+ ++
Sbjct: 269 PEIRNHEWFLKN 280
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 97/239 (40%), Gaps = 33/239 (13%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYC-GAGSVSDIMRLRKKTL--SEDEIATILCDTLKGLEY 63
P++V+ +Y + L++V E+ GA +I++ SE + + L+ L Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
H IHRD+K C ++ ++ KL
Sbjct: 148 CHDNNIIHRDVKP---------------HCVLLASK---------------ENSAPVKLG 177
Query: 124 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD 183
FGVA QL ++ +GTP +MAPEV++ Y D+W G+ + G P+
Sbjct: 178 GFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 237
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHD 242
+I K + R+ + D V R L+ +P ER T E LNH +++ D
Sbjct: 238 TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD 296
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 107 LKAGNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
LK N+LL ++ KLADFG+A ++ GTP +++PEV+++ Y D
Sbjct: 129 LKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVD 188
Query: 164 MWSLGITALEMAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCL 219
+W+ G+ + G PP+ D + I P P E D TPE + +++ L
Sbjct: 189 IWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSP---EWDTVTPEAKNLINQML 245
Query: 220 VKNPEERATASEMLNHEFIQRHDTDPS 246
NP +R TA E L H ++ + T S
Sbjct: 246 TINPAKRITAHEALKHPWVCQRSTVAS 272
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 99/252 (39%), Gaps = 63/252 (25%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +V++ T L IVMEY G + + + SEDE + G+ Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG--HAKLAD 124
+ HRD LK N LL+ K+
Sbjct: 134 MQVCHRD---------------------------------LKLENTLLDGSPAPRLKICA 160
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGD 183
FG + ++TV GTP ++APEV+ + YD VAD+WS G+T M G P+ D
Sbjct: 161 FGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
Query: 184 IHPMRAIFMIPTKPPPSFRE------------PDV--WTPEFIDFVSRCLVKNPEERATA 229
+ P +FR+ PD +PE +SR V +P +R +
Sbjct: 220 -----------PEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISI 268
Query: 230 SEMLNHEFIQRH 241
E+ NHE+ ++
Sbjct: 269 PEIRNHEWFLKN 280
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 97/239 (40%), Gaps = 33/239 (13%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYC-GAGSVSDIMRLRKKTL--SEDEIATILCDTLKGLEY 63
P++V+ +Y + L++V E+ GA +I++ SE + + L+ L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
H IHRD+K C ++ ++ KL
Sbjct: 146 CHDNNIIHRDVKP---------------HCVLLASK---------------ENSAPVKLG 175
Query: 124 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD 183
FGVA QL ++ +GTP +MAPEV++ Y D+W G+ + G P+
Sbjct: 176 GFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRHD 242
+I K + R+ + D V R L+ +P ER T E LNH +++ D
Sbjct: 236 TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD 294
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 40/230 (17%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D+PY+V+ G + L +VME G G + + +++ + +A +L G
Sbjct: 64 MHQLDNPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 122
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL + +HRD L A N+LL +A
Sbjct: 123 MKYLEEKNFVHRD---------------------------------LAARNVLLVNRHYA 149
Query: 121 KLADFGVAGQL--TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D+ + P W APE I + +D+WS G+T E ++
Sbjct: 150 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 209
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
G+ PY + + I + P PE +S C + E+R
Sbjct: 210 GQKPYKKMKGPEVMAFI--EQGKRMECPPECPPELYALMSDCWIYKWEDR 257
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 49/273 (17%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL-CDTLKGLEYLHLRR---------- 68
TD + + E G G+ S + R KKT +++ A I+ L ++ L R
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 69 ----KIHRDI-KAGSGTLVYD-------------RLDYCSIKCNVITNQIYKTLFR---- 106
++H I + G LV+D R Y + +QI +++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 107 ------LKAGNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG 157
LK N+LL ++ KLADFG+A ++ GTP +++PEV+++
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 158 YDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPDVWTPEFID 213
Y D+W+ G+ + G PP+ D + I P P E D TPE +
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSP---EWDTVTPEAKN 266
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQRHDTDPS 246
+++ L NP +R TA + L H ++ + T S
Sbjct: 267 LINQMLTINPAKRITADQALKHPWVCQRSTVAS 299
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 105/274 (38%), Gaps = 64/274 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P +V L +V E+ + ++ K L + +I L L+G
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ + H R +HRD LK N+L+N++G
Sbjct: 132 VAHCHQHRILHRD---------------------------------LKPQNLLINSDGAL 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEMAEGKP 179
KLADFG+A + + T ++ AP+V+ Y D+WS+G EM GKP
Sbjct: 159 KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218
Query: 180 PY---GDIHPMRAIFMIPTKPP----PSFREPDVW----------------TPEF----I 212
+ D + IF I P P +E +W P F I
Sbjct: 219 LFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI 278
Query: 213 DFVSRCLVKNPEERATASEMLNHEFIQRHDTDPS 246
D +S L +P +R +A + +NH + + D DP
Sbjct: 279 DLLSNMLCFDPNKRISARDAMNHPYFK--DLDPQ 310
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYD----- 159
LK N L+ +G KL DFG+A Q+ T +++ +GT +M PE I+++
Sbjct: 134 LKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192
Query: 160 ------CVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFID 213
+D+WSLG M GK P+ I + P PD+ + D
Sbjct: 193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 252
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQ 239
+ CL ++P++R + E+L H ++Q
Sbjct: 253 VLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 93/245 (37%), Gaps = 49/245 (20%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +V++ T L I+MEY G + + + SEDE L G+ Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERI-CNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG--HAKLAD 124
+ HRD LK N LL+ K+ D
Sbjct: 135 MQICHRD---------------------------------LKLENTLLDGSPAPRLKICD 161
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGD 183
FG + ++TV GTP ++APEV+ YD +AD+WS G+T M G P+ D
Sbjct: 162 FGYSKSSVLHSQPKSTV-GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
Query: 184 IHPMR-------AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHE 236
R I + P R +PE +SR V +P R + E+ H
Sbjct: 221 PEEPRDYRKTIQRILSVKYSIPDDIR----ISPECCHLISRIFVADPATRISIPEIKTHS 276
Query: 237 FIQRH 241
+ ++
Sbjct: 277 WFLKN 281
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 49/250 (19%)
Query: 3 QCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLE 62
Q S +++ Y + +++VME CG ++ ++ +KK++ E + + L+ +
Sbjct: 68 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVH 125
Query: 63 YLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKL 122
+H +H D LK N L+ +G KL
Sbjct: 126 TIHQHGIVHSD---------------------------------LKPANFLI-VDGMLKL 151
Query: 123 ADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYD-----------CVADMWSLGI 169
DFG+A Q+ T +++ +GT +M PE I+++ +D+WSLG
Sbjct: 152 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 211
Query: 170 TALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 229
M GK P+ I + P PD+ + D + CL ++P++R +
Sbjct: 212 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 271
Query: 230 SEMLNHEFIQ 239
E+L H ++Q
Sbjct: 272 PELLAHPYVQ 281
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 105/274 (38%), Gaps = 64/274 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ P +V L +V E+ + ++ K L + +I L L+G
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ + H R +HRD LK N+L+N++G
Sbjct: 132 VAHCHQHRILHRD---------------------------------LKPQNLLINSDGAL 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEMAEGKP 179
KLADFG+A + + T ++ AP+V+ Y D+WS+G EM GKP
Sbjct: 159 KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218
Query: 180 PY---GDIHPMRAIFMIPTKPP----PSFREPDVW----------------TPEF----I 212
+ D + IF I P P +E +W P F I
Sbjct: 219 LFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI 278
Query: 213 DFVSRCLVKNPEERATASEMLNHEFIQRHDTDPS 246
D +S L +P +R +A + +NH + + D DP
Sbjct: 279 DLLSNMLCFDPNKRISARDAMNHPYFK--DLDPQ 310
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYD----- 159
LK N L+ +G KL DFG+A Q+ T +++ +GT +M PE I+++
Sbjct: 153 LKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 160 ------CVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFID 213
+D+WSLG M GK P+ I + P PD+ + D
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 271
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQ 239
+ CL ++P++R + E+L H ++Q
Sbjct: 272 VLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYD----- 159
LK N L+ +G KL DFG+A Q+ T +++ +GT +M PE I+++
Sbjct: 133 LKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 191
Query: 160 ------CVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFID 213
+D+WSLG M GK P+ I + P PD+ + D
Sbjct: 192 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 251
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQ 239
+ CL ++P++R + E+L H ++Q
Sbjct: 252 VLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
SP +V YG+ + + I ME GS+ +++ + L ED L L+GLEYL
Sbjct: 122 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYL 180
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-HAKLA 123
H RR +H D+KA N+LL+++G A L
Sbjct: 181 HTRRILHGDVKAD---------------------------------NVLLSSDGSRAALC 207
Query: 124 DFGVA-----GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
DFG A L ++ + + GT MAPEV+ D D+WS L M G
Sbjct: 208 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 267
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ I ++PPP P P + L K P RA+A E+
Sbjct: 268 HPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 321
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
SP +V YG+ + + I ME GS+ +++ + L ED L L+GLEYL
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYL 166
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-HAKLA 123
H RR +H D+KA N+LL+++G A L
Sbjct: 167 HTRRILHGDVKAD---------------------------------NVLLSSDGSRAALC 193
Query: 124 DFGVA-----GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
DFG A L ++ + + GT MAPEV+ D D+WS L M G
Sbjct: 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ I ++PPP P P + L K P RA+A E+
Sbjct: 254 HPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 307
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYD----- 159
LK N L+ +G KL DFG+A Q+ T +++ +GT +M PE I+++
Sbjct: 181 LKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 160 ------CVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFID 213
+D+WSLG M GK P+ I + P PD+ + D
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQ 239
+ CL ++P++R + E+L H ++Q
Sbjct: 300 VLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYD----- 159
LK N L+ +G KL DFG+A Q+ T +++ +GT +M PE I+++
Sbjct: 181 LKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 160 ------CVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFID 213
+D+WSLG M GK P+ I + P PD+ + D
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQ 239
+ CL ++P++R + E+L H ++Q
Sbjct: 300 VLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 94/234 (40%), Gaps = 40/234 (17%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
SP +V YG+ + + I ME GS+ +++ + L ED L L+GLEYL
Sbjct: 124 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYL 182
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG-HAKLA 123
H RR +H D+KA N+LL+++G A L
Sbjct: 183 HTRRILHGDVKAD---------------------------------NVLLSSDGSRAALC 209
Query: 124 DFGVA-----GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
DFG A L ++ + + GT MAPEV+ D D+WS L M G
Sbjct: 210 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 269
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
P+ I ++PPP P P + L K P RA+A E+
Sbjct: 270 HPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 323
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 42/208 (20%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P V+ G K+T + I+ E+ GS+ +R + ++ +L G
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 147
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 148 MKYLADMNYVHRD---------------------------------LAARNILVNSNLVC 174
Query: 121 KLADFGVAGQLTDTMAK--RNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-M 174
K++DFG++ L D + + +G W APE IQ + +D+WS GI E M
Sbjct: 175 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234
Query: 175 AEGKPPYGDIHPMRAIFMIPTK---PPP 199
+ G+ PY D+ I I PPP
Sbjct: 235 SYGERPYWDMTNQDVINAIEQDYRLPPP 262
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 39/183 (21%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D ++ + ++ L++VM+Y G + ++ + L ED + + + ++ +
Sbjct: 132 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H +HRDIK N+LL+ GH +LAD
Sbjct: 192 HQLHYVHRDIKPD---------------------------------NVLLDVNGHIRLAD 218
Query: 125 FGVAGQLTDTMAKRNTV-IGTPFWMAPEVIQEI-----GYDCVADMWSLGITALEMAEGK 178
FG ++ D +++V +GTP +++PE++Q + Y D WSLG+ EM G+
Sbjct: 219 FGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
Query: 179 PPY 181
P+
Sbjct: 279 TPF 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 48/206 (23%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D ++ + ++ L++VM+Y G + ++ + L ED + + + ++ +
Sbjct: 148 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H +HRDIK N+LL+ GH +LAD
Sbjct: 208 HQLHYVHRDIKPD---------------------------------NVLLDVNGHIRLAD 234
Query: 125 FGVAGQLTDTMAKRNTV-IGTPFWMAPEVIQEI-----GYDCVADMWSLGITALEMAEGK 178
FG ++ D +++V +GTP +++PE++Q + Y D WSLG+ EM G+
Sbjct: 235 FGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
Query: 179 PP---------YGDIHPMRAIFMIPT 195
P YG I F P+
Sbjct: 295 TPFYAESLVETYGKIMNHEERFQFPS 320
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 60/253 (23%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
++ S +T LW++ Y GS+ D ++L TL I+ GL +LH+
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHI- 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
+I G D LK+ NIL+ G +AD G+
Sbjct: 124 -----EIFGTQGKPAIAHRD-------------------LKSKNILVKKNGQCCIADLGL 159
Query: 128 A---GQLTDTM-AKRNTVIGTPFWMAPEVIQE-IGYDCV-----ADMWSLGITALEMA-- 175
A Q T+ + N +GT +MAPEV+ E I DC D+W+ G+ E+A
Sbjct: 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
Query: 176 --------EGKPPYGDIHP-------MRAIFMI----PTKPPPSFREPDVWTPEFIDFVS 216
+ KPP+ D+ P MR + + P P F +P + +
Sbjct: 220 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTL--TSLAKLMK 277
Query: 217 RCLVKNPEERATA 229
C +NP R TA
Sbjct: 278 ECWYQNPSARLTA 290
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 42/231 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D+PY+V+ G + L +VME G G + + +++ + +A +L G
Sbjct: 390 MHQLDNPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 448
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL + +HR+ L A N+LL +A
Sbjct: 449 MKYLEEKNFVHRN---------------------------------LAARNVLLVNRHYA 475
Query: 121 KLADFGVAGQL--TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D+ + P W APE I + +D+WS G+T E ++
Sbjct: 476 KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 535
Query: 177 GKPPYGDIH-PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
G+ PY + P F+ K P PE +S C + E+R
Sbjct: 536 GQKPYKKMKGPEVMAFIEQGK---RMECPPECPPELYALMSDCWIYKWEDR 583
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 60/253 (23%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
++ S +T LW++ Y GS+ D ++L TL I+ GL +LH+
Sbjct: 67 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHI- 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
+I G D LK+ NIL+ G +AD G+
Sbjct: 124 -----EIFGTQGKPAIAHRD-------------------LKSKNILVKKNGQCCIADLGL 159
Query: 128 A---GQLTDTM-AKRNTVIGTPFWMAPEVIQE-IGYDCV-----ADMWSLGITALEMA-- 175
A Q T+ + N +GT +MAPEV+ E I DC D+W+ G+ E+A
Sbjct: 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
Query: 176 --------EGKPPYGDIHP-------MRAIFMI----PTKPPPSFREPDVWTPEFIDFVS 216
+ KPP+ D+ P MR + + P P F +P + +
Sbjct: 220 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTL--TSLAKLMK 277
Query: 217 RCLVKNPEERATA 229
C +NP R TA
Sbjct: 278 ECWYQNPSARLTA 290
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 93/232 (40%), Gaps = 43/232 (18%)
Query: 4 CDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEY 63
+ P +VK + L++V EY G V D + + E E + ++Y
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX-KEKEARAKFRQIVSAVQY 128
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
H + +HRD LKA N+LL+ + + K+A
Sbjct: 129 CHQKFIVHRD---------------------------------LKAENLLLDADXNIKIA 155
Query: 124 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYG 182
DFG + + T K + G P + APE+ Q YD D+WSLG+ + G P+
Sbjct: 156 DFGFSNEFT-FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
Query: 183 --DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
++ +R + +R P + + + + + L+ NP +R T ++
Sbjct: 215 GQNLKELRERVL-----RGKYRIPFYXSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 132 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 158
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 159 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 131 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 157
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 158 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 102/250 (40%), Gaps = 49/250 (19%)
Query: 3 QCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLE 62
Q S +++ Y + +++VME CG ++ ++ +KK++ E + + L+ +
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVH 141
Query: 63 YLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKL 122
+H +H D LK N L+ +G KL
Sbjct: 142 TIHQHGIVHSD---------------------------------LKPANFLI-VDGMLKL 167
Query: 123 ADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYD-----------CVADMWSLGI 169
DFG+A Q+ +++ +GT +M PE I+++ +D+WSLG
Sbjct: 168 IDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 227
Query: 170 TALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 229
M GK P+ I + P PD+ + D + CL ++P++R +
Sbjct: 228 ILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
Query: 230 SEMLNHEFIQ 239
E+L H ++Q
Sbjct: 288 PELLAHPYVQ 297
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 133 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 159
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 160 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 99/253 (39%), Gaps = 60/253 (23%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLR 67
++ S +T LW++ Y GS+ D ++L TL I+ GL +LH+
Sbjct: 96 FIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHI- 152
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
+I G D LK+ NIL+ G +AD G+
Sbjct: 153 -----EIFGTQGKPAIAHRD-------------------LKSKNILVKKNGQCCIADLGL 188
Query: 128 A---GQLTDTM-AKRNTVIGTPFWMAPEVIQE-IGYDCV-----ADMWSLGITALEMA-- 175
A Q T+ + N +GT +MAPEV+ E I DC D+W+ G+ E+A
Sbjct: 189 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
Query: 176 --------EGKPPYGDIHP-------MRAIFMI----PTKPPPSFREPDVWTPEFIDFVS 216
+ KPP+ D+ P MR + + P P F +P + +
Sbjct: 249 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTL--TSLAKLMK 306
Query: 217 RCLVKNPEERATA 229
C +NP R TA
Sbjct: 307 ECWYQNPSARLTA 319
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 164 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 190
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 191 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 104/266 (39%), Gaps = 70/266 (26%)
Query: 1 MQQCDSPYVVKYYGSYF-------------KNTDLWIVMEYCGAGSVSDIMRLRKKTLSE 47
+ + YVV+YY ++ K + L+I MEYC G++ D++
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 48 DEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRL 107
DE + L+ L Y+H + IHRD L
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRD---------------------------------L 142
Query: 108 KAGNILLNTEGHAKLADFGVAGQLTDTM--------------AKRNTVIGTPFWMAPEVI 153
K NI ++ + K+ DFG+A + ++ + IGT ++A EV+
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 154 QEIG-YDCVADMWSLGITALEMAEGKPPYGD----IHPMRAIFMIPTKPPPSFREPDVWT 208
G Y+ DM+SLGI EM P+ ++ ++ + + + PP F + +
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKV 259
Query: 209 PEFIDFVSRCLVKNPEERATASEMLN 234
+ I + + +P +R A +LN
Sbjct: 260 EKKI--IRLLIDHDPNKRPGARTLLN 283
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 137 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 163
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 164 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 139 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 165
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 166 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 94/236 (39%), Gaps = 45/236 (19%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +++ Y + +++++E+ G + ++ + E AT + + L Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADALHYCHE 133
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRDIK N+L+ +G K+ADFG
Sbjct: 134 RKVIHRDIKPE---------------------------------NLLMGYKGELKIADFG 160
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY---GD 183
+ + +R + GT ++ PE+I+ +D D+W G+ E G PP+
Sbjct: 161 WS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 218
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
R I + K PP + D +S+ L +P +R ++ H +++
Sbjct: 219 TETHRRIVNVDLKFPPFLSDGSK------DLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 133 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 159
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 160 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 140 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 166
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 167 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 136 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 162
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 163 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 151 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 177
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 178 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 138 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 164
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 165 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 36 DIMRLRKKTLSEDEIATILCDTLKGLEYLH--LRRKIHRDIKAGSG-TLVYDRLDYCSIK 92
+I+RL ++ E+ ++ D + G E + R+ + + A + + + YC
Sbjct: 66 NIVRLHD-SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 93 CNVITNQIYKTLFRLKAGNILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMA 149
V N LK N+LL ++ KLADFG+A ++ D+ A + GTP +++
Sbjct: 125 GIVHRN--------LKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLS 175
Query: 150 PEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPD 205
PEV+++ Y D+W+ G+ + G PP+ D R I P P E D
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP---EWD 232
Query: 206 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
TPE + L NP++R TA + L +I
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D MA
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMAG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 96 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 146
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D MA
Sbjct: 147 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMA--- 176
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 297 QALAHAYFAQYHDPD 311
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 94/236 (39%), Gaps = 45/236 (19%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +++ Y + +++++E+ G + ++ + E AT + + L Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADALHYCHE 132
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRDIK N+L+ +G K+ADFG
Sbjct: 133 RKVIHRDIKPE---------------------------------NLLMGYKGELKIADFG 159
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY---GD 183
+ + +R + GT ++ PE+I+ +D D+W G+ E G PP+
Sbjct: 160 WS--VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
R I + K PP + D +S+ L +P +R ++ H +++
Sbjct: 218 TETHRRIVNVDLKFPPFLSDGSK------DLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 107 LKAGNILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
LK N+LL ++ KLADFG+A ++ D+ A + GTP +++PEV+++ Y D
Sbjct: 130 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKKDPYSKPVD 188
Query: 164 MWSLGITALEMAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCL 219
+W+ G+ + G PP+ D R I P P E D TPE + L
Sbjct: 189 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP---EWDTVTPEAKSLIDSML 245
Query: 220 VKNPEERATASEMLNHEFI 238
NP++R TA + L +I
Sbjct: 246 TVNPKKRITADQALKVPWI 264
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 36/225 (16%)
Query: 16 YFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIK 75
Y T ++VM+ G + D + L + +E + + ++ L ++YLH +HRD+K
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRI-LERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 76 AGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTM 135
+ L Y + + N I++ G +K+ G+
Sbjct: 134 P-------ENLLYLTPEEN---------------SKIMITDFGLSKMEQNGIM------- 164
Query: 136 AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPT 195
+T GTP ++APEV+ + Y D WS+G+ + G PP+ + +F
Sbjct: 165 ---STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE-ETESKLFEKIK 220
Query: 196 KPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ F P D + DF+ L K+P ER T + L+H +I
Sbjct: 221 EGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 107 LKAGNILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
LK N+LL ++ KLADFG+A ++ D+ A + GTP +++PEV+++ Y D
Sbjct: 131 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 164 MWSLGITALEMAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCL 219
+W+ G+ + G PP+ D R I P P E D TPE + L
Sbjct: 190 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP---EWDTVTPEAKSLIDSML 246
Query: 220 VKNPEERATASEMLNHEFI 238
NP++R TA + L +I
Sbjct: 247 TVNPKKRITADQALKVPWI 265
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D MA
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMA--- 180
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 151 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 177
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 178 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 45/236 (19%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +++ Y + +++++E+ G + ++ + E AT + + L Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADALHYCHE 132
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ IHRDIK N+L+ +G K+ADFG
Sbjct: 133 RKVIHRDIKPE---------------------------------NLLMGYKGELKIADFG 159
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY---GD 183
+ +R + GT ++ PE+I+ +D D+W G+ E G PP+
Sbjct: 160 WSVHAPSL--RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
R I + K PP + D +S+ L +P +R ++ H +++
Sbjct: 218 TETHRRIVNVDLKFPPFLSDGSK------DLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYD----- 159
LK N L+ +G KL DFG+A Q+ T +++ +G +M PE I+++
Sbjct: 181 LKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK 239
Query: 160 ------CVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFID 213
+D+WSLG M GK P+ I + P PD+ + D
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD 299
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQ 239
+ CL ++P++R + E+L H ++Q
Sbjct: 300 VLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
L++VM+ G + D + + K +E + +T++ L + YLH +HRD+K + L
Sbjct: 95 LYLVMQLVSGGELFDRI-VEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPEN--L 151
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 141
+Y D + I+++ G +K+ G D M+ T
Sbjct: 152 LYYSQD--------------------EESKIMISDFGLSKMEGKG------DVMS---TA 182
Query: 142 IGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSF 201
GTP ++APEV+ + Y D WS+G+ A + G PP+ D + + +F K F
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK-LFEQILKAEYEF 241
Query: 202 REP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
P D + DF+ + K+P +R T + H +I
Sbjct: 242 DSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 107 LKAGNILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
LK N+LL ++ KLADFG+A ++ D+ A + GTP +++PEV+++ Y D
Sbjct: 154 LKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFAGTPGYLSPEVLKKDPYSKPVD 212
Query: 164 MWSLGITALEMAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCL 219
+W+ G+ + G PP+ D R I P P E D TPE + L
Sbjct: 213 IWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP---EWDTVTPEAKSLIDSML 269
Query: 220 VKNPEERATASEML 233
NP++R TA + L
Sbjct: 270 TVNPKKRITADQAL 283
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG+A L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 102 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 152
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 153 ---------------------------LKPSNLAVNEDSELKILDFGLARHTDDEMTG-- 183
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 184 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 303 QALAHAYFAQYHDPD 317
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 106 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 156
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 157 ---------------------------LKPSNLAVNEDSELKILDFGLARHTDDEMTG-- 187
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 188 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 307 QALAHAYFAQYHDPD 321
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE+ + + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 133 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 159
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 160 LTKVLPQD--KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKXQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDXELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P+++K Y ++ +V+EY G + D + R K +SE E + +EY H
Sbjct: 74 PHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHR 131
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD LK N+LL+ + K+ADFG
Sbjct: 132 HKIVHRD---------------------------------LKPENLLLDEHLNVKIADFG 158
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGDIH 185
++ +TD + T G+P + APEVI Y D+WS G+ M + P+ D
Sbjct: 159 LSNIMTDGNFLK-TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-E 216
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
+ +F + P +P + R L+ NP R + E++ ++ +
Sbjct: 217 SIPVLF--KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P+++K Y ++ +V+EY G + D + R K +SE E + +EY H
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHR 121
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD LK N+LL+ + K+ADFG
Sbjct: 122 HKIVHRD---------------------------------LKPENLLLDEHLNVKIADFG 148
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGDIH 185
++ +TD + T G+P + APEVI Y D+WS G+ M + P+ D
Sbjct: 149 LSNIMTDGNFLK-TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-E 206
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
+ +F + P +P + R L+ NP R + E++ ++ +
Sbjct: 207 SIPVLF--KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P+++K Y ++ +V+EY G + D + R K +SE E + +EY H
Sbjct: 73 PHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHR 130
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD LK N+LL+ + K+ADFG
Sbjct: 131 HKIVHRD---------------------------------LKPENLLLDEHLNVKIADFG 157
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGDIH 185
++ +TD + T G+P + APEVI Y D+WS G+ M + P+ D
Sbjct: 158 LSNIMTDGNFLK-TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-E 215
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
+ +F + P +P + R L+ NP R + E++ ++ +
Sbjct: 216 SIPVLF--KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P+++K Y ++ +V+EY G + D + R K +SE E + +EY H
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYAG-NELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHR 125
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +HRD LK N+LL+ + K+ADFG
Sbjct: 126 HKIVHRD---------------------------------LKPENLLLDEHLNVKIADFG 152
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSLGITALEMAEGKPPYGDIH 185
++ +TD + T G+P + APEVI Y D+WS G+ M + P+ D
Sbjct: 153 LSNIMTDGNFLK-TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-E 210
Query: 186 PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
+ +F + P +P + R L+ NP R + E++ ++ +
Sbjct: 211 SIPVLF--KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 42/208 (20%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P V+ G K+T + I+ E+ GS+ +R + ++ +L G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HR L A NIL+N+
Sbjct: 122 MKYLADMNYVHR---------------------------------ALAARNILVNSNLVC 148
Query: 121 KLADFGVAGQLTDTMA--KRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-M 174
K++DFG++ L D + + +G W APE IQ + +D+WS GI E M
Sbjct: 149 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
Query: 175 AEGKPPYGDIHPMRAIFMIPTK---PPP 199
+ G+ PY D+ I I PPP
Sbjct: 209 SYGERPYWDMTNQDVINAIEQDYRLPPP 236
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 111 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 161
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 162 ---------------------------LKPSNLAVNEDXELKILDFGLARHTDDEMT--- 191
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 252 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 312 QALAHAYFAQYHDPD 326
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 98/256 (38%), Gaps = 49/256 (19%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IV E G + S I + +E E + I
Sbjct: 113 QC--PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSI 170
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 171 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 202
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T + T TP+++APEV+ YD D WSLG+ + G
Sbjct: 203 --LKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 229
PP+ H + T+ P P + E + E + L P +R T
Sbjct: 260 YPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEV---SEEVKXLIRNLLKTEPTQRXTI 316
Query: 230 SEMLNHEFIQRHDTDP 245
+E NH +I + P
Sbjct: 317 TEFXNHPWIXQSTKVP 332
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 105 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 155
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 156 ---------------------------LKPSNLAVNEDXELKILDFGLARHTDDEMTG-- 186
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 187 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 306 QALAHAYFAQYHDPD 320
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 75/258 (29%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
+++++V GA +++I ++ + LS++ + ++ L+GL+Y+H IHRD
Sbjct: 106 SEVYLVTTLMGA-DLNNI--VKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRD------ 156
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + ++ DFG+A Q + M
Sbjct: 157 ---------------------------LKPSNVAVNEDSELRILDFGLARQADEEM---T 186
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ +GK P I ++ I +
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 246
Query: 196 KPPPS----------------------------FREPDVWTPEFIDFVSRCLVKNPEERA 227
P P FR + P ID + R LV + ++R
Sbjct: 247 TPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGAN---PLAIDLLGRMLVLDSDQRV 303
Query: 228 TASEMLNHE-FIQRHDTD 244
+A+E L H F Q HD +
Sbjct: 304 SAAEALAHAYFSQYHDPE 321
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 105 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 155
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 156 ---------------------------LKPSNLAVNEDXELKILDFGLARHTDDEMTG-- 186
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 187 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 306 QALAHAYFAQYHDPD 320
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ + + ++ KG+EYL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 136 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 162
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 163 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 34/234 (14%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P ++K + T++ +V+E G + D + + K SE + A + L+ + YLH
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRI-VEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+HRD+K N +Y T + K+ADFG
Sbjct: 167 NGIVHRDLKP--------------------ENLLYATP----------APDAPLKIADFG 196
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHP 186
++ ++ + TV GTP + APE+++ Y DMWS+GI + G P+ D
Sbjct: 197 LS-KIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255
Query: 187 MRAIFMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +F F P D + D V + +V +P++R T + L H ++
Sbjct: 256 DQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 46/229 (20%)
Query: 22 LWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
L I+ME G + S I + +E E A I+ D +++LH HRD+K
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKP---- 156
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
+ L Y S + + + KL DFG A + T + T
Sbjct: 157 ---ENLLYTSKEKDAVL-----------------------KLTDFGFAKETTQNALQ--T 188
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY-----GDIHP-MRAIFMIP 194
TP+++APEV+ YD DMWSLG+ + G PP+ I P M+ +
Sbjct: 189 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 248
Query: 195 TK--PPPSFREPDVWTPEFIDFVSRCLVK-NPEERATASEMLNHEFIQR 240
P P + E + I R L+K +P ER T ++ +NH +I +
Sbjct: 249 QYGFPNPEWSEVSEDAKQLI----RLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 107 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 157
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 158 ---------------------------LKPSNLAVNEDCELKILDFGLARHTADEMTG-- 188
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 189 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 308 QALAHAYFAQYHDPD 322
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 107 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 157
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 158 ---------------------------LKPSNLAVNEDCELKILDFGLARHTADEMTG-- 188
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 189 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 308 QALAHAYFAQYHDPD 322
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 107 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 157
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 158 ---------------------------LKPSNLAVNEDCELKILDFGLARHTADEMTG-- 188
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 189 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 308 QALAHAYFAQYHDPD 322
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 41/226 (18%)
Query: 16 YFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIK 75
Y L IV ++C S+ + + ++ I T +G++YLH + IHRD
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD-- 145
Query: 76 AGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTM 135
LK+ NI L+ + K+ DFG+A + +
Sbjct: 146 -------------------------------LKSNNIFLHEDNTVKIGDFGLATEKSRWS 174
Query: 136 AKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAI 190
+ G+ WMAPEVI+ Y +D+++ GI E+ G+ PY +I+ I
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 234
Query: 191 FMIPTKP--PPSFREPDVWTPEFID-FVSRCLVKNPEERATASEML 233
+ + P + P+ + ++ CL K +ER + +L
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 158 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 184
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 185 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 244
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 245 GERPYWEMSNQDVIKAVDEGYRLPPP 270
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 96 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 146
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 147 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 177
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 178 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 237 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 297 QALAHAYFAQYHDPD 311
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKXQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 94/228 (41%), Gaps = 44/228 (19%)
Query: 22 LWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
L I+ME G + S I + +E E A I+ D +++LH HRD+K
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKP---- 137
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
+ L Y S + + + KL DFG A + T + T
Sbjct: 138 ---ENLLYTSKEKDAVL-----------------------KLTDFGFAKETTQNALQ--T 169
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY-----GDIHP-MRAIFMIP 194
TP+++APEV+ YD DMWSLG+ + G PP+ I P M+ +
Sbjct: 170 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLG 229
Query: 195 TK--PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
P P + E + I + L +P ER T ++ +NH +I +
Sbjct: 230 QYGFPNPEWSEVSEDAKQLIRLL---LKTDPTERLTITQFMNHPWINQ 274
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 98 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 148
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 149 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 179
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 180 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 238
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 239 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 298
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 299 QALAHAYFAQYHDPD 313
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 131 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 217
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 218 GERPYWEMSNQDVIKAVDEGYRLPPP 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 111 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 161
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 162 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMT--- 191
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 251
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 252 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 311
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 312 QALAHAYFAQYHDPD 326
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A + +
Sbjct: 129 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATEKS 155
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 216 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 123 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 173
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 174 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMXG-- 204
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 205 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 264 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 324 QALAHAYFAQYHDPD 338
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 96 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 146
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 147 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 177
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 178 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 297 QALAHAYFAQYHDPD 311
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 97 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 147
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 148 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 178
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 179 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 298 QALAHAYFAQYHDPD 312
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 102 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 152
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 153 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 183
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 184 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 303 QALAHAYFAQYHDPD 317
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 105 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 155
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 156 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 186
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 187 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 306 QALAHAYFAQYHDPD 320
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 79/199 (39%), Gaps = 37/199 (18%)
Query: 40 LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQ 99
L K L+ + + KG+E+L R+ IHRD
Sbjct: 183 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD-------------------------- 216
Query: 100 IYKTLFRLKAGNILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIG 157
L A NILL+ + K+ DFG+A + D R P WMAPE I +
Sbjct: 217 -------LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 269
Query: 158 YDCVADMWSLGITALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVS 216
Y +D+WS G+ E+ + G PY + + F K R PD TPE +
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGASPYPGVK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTML 328
Query: 217 RCLVKNPEERATASEMLNH 235
C P +R T SE++ H
Sbjct: 329 DCWHGEPSQRPTFSELVEH 347
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 112 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 162
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 163 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 193
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 194 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 313 QALAHAYFAQYHDPD 327
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 99 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 149
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 150 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 180
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 181 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 239
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 240 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 299
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 300 QALAHAYFAQYHDPD 314
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 112 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 162
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 163 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 193
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 194 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 313 QALAHAYFAQYHDPD 327
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 120 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 170
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 171 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMT--- 200
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 261 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 321 QALAHAYFAQYHDPD 335
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 148
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A + +
Sbjct: 149 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATEKS 175
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 176 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 235
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 236 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 112 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 162
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 163 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 193
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 194 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 253 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 312
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 313 QALAHAYFAQYHDPD 327
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 79/199 (39%), Gaps = 37/199 (18%)
Query: 40 LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQ 99
L K L+ + + KG+E+L R+ IHRD
Sbjct: 185 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD-------------------------- 218
Query: 100 IYKTLFRLKAGNILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIG 157
L A NILL+ + K+ DFG+A + D R P WMAPE I +
Sbjct: 219 -------LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 271
Query: 158 YDCVADMWSLGITALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVS 216
Y +D+WS G+ E+ + G PY + + F K R PD TPE +
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGASPYPGVK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTML 330
Query: 217 RCLVKNPEERATASEMLNH 235
C P +R T SE++ H
Sbjct: 331 DCWHGEPSQRPTFSELVEH 349
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 97 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 147
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 148 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 178
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 179 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 237
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 238 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 297
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 298 QALAHAYFAQYHDPD 312
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 102 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 152
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 153 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 183
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 184 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 303 QALAHAYFAQYHDPD 317
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 106 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 156
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 157 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 187
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 188 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 307 QALAHAYFAQYHDPD 321
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 148 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 174
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 175 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 234
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 235 GERPYWEMSNQDVIKAVDEGYRLPPP 260
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 37/180 (20%)
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
KG+E+L R+ IHRD L A NILL+ +
Sbjct: 209 KGMEFLASRKCIHRD---------------------------------LAARNILLSEKN 235
Query: 119 HAKLADFGVAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-A 175
K+ DFG+A + D R P WMAPE I + Y +D+WS G+ E+ +
Sbjct: 236 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
G PY + + F K R PD TPE + C P +R T SE++ H
Sbjct: 296 LGASPYPGVK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 81/206 (39%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGFVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 110 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 160
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 161 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEM---T 190
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 191 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 250
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 251 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 310
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 311 QALAHAYFAQYHDPD 325
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 123 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 173
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 174 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 204
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 205 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 263
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 264 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 323
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 324 QALAHAYFAQYHDPD 338
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 107 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 157
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 158 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 188
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 189 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 247
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 248 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 307
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 308 QALAHAYFAQYHDPD 322
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 119 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 169
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 170 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 200
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 201 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 260 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 320 QALAHAYFAQYHDPD 334
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 120 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 170
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 171 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMX--- 200
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 261 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 321 QALAHAYFAQYHDPD 335
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 45/249 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMRLRKKTLSEDEIATILCDTLK 59
+++ +S +VV +Y L +V+ G + I + + E +
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GLE LH R ++RD LK NILL+ GH
Sbjct: 298 GLEDLHRERIVYRD---------------------------------LKPENILLDDHGH 324
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
+++D G+A + + + V GT +MAPEV++ Y D W+LG EM G+
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
Query: 180 PYGDIH---PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASE 231
P+ + + + P + E ++P+ S+ L K+P ER +A E
Sbjct: 384 PFQQRKKKIKREEVERLVKEVPEEYSE--RFSPQARSLCSQLLCKDPAERLGCRGGSARE 441
Query: 232 MLNHEFIQR 240
+ H ++
Sbjct: 442 VKEHPLFKK 450
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 105 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 155
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 156 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 186
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 187 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 245
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 246 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 305
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 306 QALAHAYFAQYHDPD 320
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 120 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 170
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 171 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 201
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 202 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 260
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 261 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 320
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 321 QALAHAYFAQYHDPD 335
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 80/206 (38%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV EY GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG+ L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 106 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 156
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 157 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMT--- 186
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 247 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 307 QALAHAYFAQYHDPD 321
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 119 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 169
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 170 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMT--- 199
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 259
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 260 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 319
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 320 QALAHAYFAQYHDPD 334
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 98/249 (39%), Gaps = 45/249 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVS-DIMRLRKKTLSEDEIATILCDTLK 59
+++ +S +VV +Y L +V+ G + I + + E +
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GLE LH R ++RD LK NILL+ GH
Sbjct: 298 GLEDLHRERIVYRD---------------------------------LKPENILLDDHGH 324
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
+++D G+A + + + V GT +MAPEV++ Y D W+LG EM G+
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
Query: 180 PYGDIH---PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----ATASE 231
P+ + + + P + E ++P+ S+ L K+P ER +A E
Sbjct: 384 PFQQRKKKIKREEVERLVKEVPEEYSE--RFSPQARSLCSQLLCKDPAERLGCRGGSARE 441
Query: 232 MLNHEFIQR 240
+ H ++
Sbjct: 442 VKEHPLFKK 450
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A + +
Sbjct: 157 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATEKS 183
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 244 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 102 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 152
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 153 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 183
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 184 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 242
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 243 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 302
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 303 QALAHAYFAQYHDPD 317
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 37/180 (20%)
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
KG+E+L R+ IHRD L A NILL+ +
Sbjct: 211 KGMEFLASRKCIHRD---------------------------------LAARNILLSEKN 237
Query: 119 HAKLADFGVAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-A 175
K+ DFG+A + D R P WMAPE I + Y +D+WS G+ E+ +
Sbjct: 238 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
G PY + + F K R PD TPE + C P +R T SE++ H
Sbjct: 298 LGASPYPGVK-IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 106 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 156
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 157 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEMTG-- 187
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 188 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 246
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 247 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 306
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 307 QALAHAYFAQYHDPD 321
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
L+IV EY GS+ D +R R ++ L D + D + +EYL +HRD
Sbjct: 262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD------- 314
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L A N+L++ + AK++DFG+ + + T
Sbjct: 315 --------------------------LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAIFMIP-TKPP 198
+ W APE ++E + +D+WS GI E+ + G+ PY I P++ + +P +
Sbjct: 349 PVK---WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDV--VPRVEKG 402
Query: 199 PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH-EFIQRHD 242
PD P D + C + R T ++ E I+ H+
Sbjct: 403 YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 41/229 (17%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + ++ I T +G++YLH + IHR
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A + +
Sbjct: 145 D---------------------------------LKSNNIFLHEDNTVKIGDFGLATEKS 171
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ Y +D+++ GI E+ G+ PY +I+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 231
Query: 188 RAIFMIPTKP--PPSFREPDVWTPEFID-FVSRCLVKNPEERATASEML 233
I + + P + P+ + ++ CL K +ER + +L
Sbjct: 232 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 75/258 (29%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
+++++V GA +++I++ + LS++ + ++ L+GL+Y+H IHRD
Sbjct: 106 SEVYLVTTLMGA-DLNNIVKC--QALSDEHVQFLVYQLLRGLKYIHSAGIIHRD------ 156
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + ++ DFG+A Q + M
Sbjct: 157 ---------------------------LKPSNVAVNEDSELRILDFGLARQADEEM---T 186
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ +GK P I ++ I +
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 246
Query: 196 KPPPS----------------------------FREPDVWTPEFIDFVSRCLVKNPEERA 227
P P FR + P ID + R LV + ++R
Sbjct: 247 TPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGAN---PLAIDLLGRMLVLDSDQRV 303
Query: 228 TASEMLNHE-FIQRHDTD 244
+A+E L H F Q HD +
Sbjct: 304 SAAEALAHAYFSQYHDPE 321
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++MEY GS+ D ++ K+ + ++ KG+EYL
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHR+ L NIL+ E K+ DFG
Sbjct: 134 KRYIHRN---------------------------------LATRNILVENENRVKIGDFG 160
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 161 LTKVLPQD--KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 49/229 (21%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D P++V ++ L +++ G + + + SE ++ + + GLE++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILGLEHM 308
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H R ++RD LK NILL+ GH +++D
Sbjct: 309 HNRFVVYRD---------------------------------LKPANILLDEHGHVRISD 335
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGKPPY-- 181
G+A + K + +GT +MAPEV+Q+ + YD AD +SLG ++ G P+
Sbjct: 336 LGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
Query: 182 ---GDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
D H + R + + P SF +PE + L ++ R
Sbjct: 394 HKTKDKHEIDRMTLTMAVELPDSF------SPELRSLLEGLLQRDVNRR 436
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 45/236 (19%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +++ Y ++ +++++EY G + ++ + T E ATI+ + L Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQ-KSCTFDEQRTATIMEELADALMYCHG 141
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
++ IHRDIK N+LL +G K+ADFG
Sbjct: 142 KKVIHRDIKPE---------------------------------NLLLGLKGELKIADFG 168
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDI-- 184
+ +R T+ GT ++ PE+I+ ++ D+W +G+ E+ G PP+
Sbjct: 169 WSVHAPSL--RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASH 226
Query: 185 -HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
R I + K P S D +S+ L NP ER +++ H +++
Sbjct: 227 NETYRRIVKVDLKFPASV------PTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 49/229 (21%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D P++V ++ L +++ G + + + SE ++ + + GLE++
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILGLEHM 307
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H R ++RD LK NILL+ GH +++D
Sbjct: 308 HNRFVVYRD---------------------------------LKPANILLDEHGHVRISD 334
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGKPPY-- 181
G+A + K + +GT +MAPEV+Q+ + YD AD +SLG ++ G P+
Sbjct: 335 LGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392
Query: 182 ---GDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
D H + R + + P SF +PE + L ++ R
Sbjct: 393 HKTKDKHEIDRMTLTMAVELPDSF------SPELRSLLEGLLQRDVNRR 435
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 35/161 (21%)
Query: 23 WIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLV 82
++VMEY ++S+ + LS D L G+++ H R +HRDIK
Sbjct: 87 YLVMEYIEGPTLSEYIE-SHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQ----- 140
Query: 83 YDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT-MAKRNTV 141
NIL+++ K+ DFG+A L++T + + N V
Sbjct: 141 ----------------------------NILIDSNKTLKIFDFGIAKALSETSLTQTNHV 172
Query: 142 IGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYG 182
+GT + +PE + D D++S+GI EM G+PP+
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 79/206 (38%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P ++ G K + I+ EY GS+ +R + ++ +L G
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 144 MKYLSDMSAVHRD---------------------------------LAARNILVNSNLVC 170
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W APE I + +D+WS GI E M+
Sbjct: 171 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 230
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY D+ I I PPP
Sbjct: 231 GERPYWDMSNQDVIKAIEEGYRLPPP 256
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 49/229 (21%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D P++V ++ L +++ G + + + SE ++ + + GLE++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILGLEHM 308
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H R ++RD LK NILL+ GH +++D
Sbjct: 309 HNRFVVYRD---------------------------------LKPANILLDEHGHVRISD 335
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGKPPY-- 181
G+A + K + +GT +MAPEV+Q+ + YD AD +SLG ++ G P+
Sbjct: 336 LGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
Query: 182 ---GDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
D H + R + + P SF +PE + L ++ R
Sbjct: 394 HKTKDKHEIDRMTLTMAVELPDSF------SPELRSLLEGLLQRDVNRR 436
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 39/243 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q P ++ + ++ ++ +++E+ G + D + +SE E+ + +G
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L+++H +H DIK + I C KA ++
Sbjct: 162 LKHMHEHSIVHLDIKPEN------------IMCET-----------KKASSV-------- 190
Query: 121 KLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKP 179
K+ DFG+A +L D + K T T + APE++ DMW++G+ + G
Sbjct: 191 KIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS 248
Query: 180 PYGDIHPMRAIFMIPTKPPPSFREPDVWT---PEFIDFVSRCLVKNPEERATASEMLNHE 236
P+ + + + + F E D ++ PE DF+ L K P +R T + L H
Sbjct: 249 PFAGEDDLETLQNV-KRCDWEFDE-DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306
Query: 237 FIQ 239
+++
Sbjct: 307 WLK 309
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 49/229 (21%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D P++V ++ L +++ G + + + SE ++ + + GLE++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILGLEHM 308
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H R ++RD LK NILL+ GH +++D
Sbjct: 309 HNRFVVYRD---------------------------------LKPANILLDEHGHVRISD 335
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGKPPY-- 181
G+A + K + +GT +MAPEV+Q+ + YD AD +SLG ++ G P+
Sbjct: 336 LGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
Query: 182 ---GDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER 226
D H + R + + P SF +PE + L ++ R
Sbjct: 394 HKTKDKHEIDRMTLTMAVELPDSF------SPELRSLLEGLLQRDVNRR 436
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 42/173 (24%)
Query: 9 VVKYYGSYFK--NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G + +L ++ME+ GS+ + ++ K+ + ++ KG+EYL
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+R IHRD L NIL+ E K+ DFG
Sbjct: 136 KRYIHRD---------------------------------LATRNILVENENRVKIGDFG 162
Query: 127 VAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ L K + P FW APE + E + +D+WS G+ E+
Sbjct: 163 LTKVLPQD--KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 70/266 (26%)
Query: 1 MQQCDSPYVVKYYGSYF-------------KNTDLWIVMEYCGAGSVSDIMRLRKKTLSE 47
+ + YVV+YY ++ K + L+I MEYC ++ D++
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR 115
Query: 48 DEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRL 107
DE + L+ L Y+H + IHRD L
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRD---------------------------------L 142
Query: 108 KAGNILLNTEGHAKLADFGVAGQLTDTM--------------AKRNTVIGTPFWMAPEVI 153
K NI ++ + K+ DFG+A + ++ + IGT ++A EV+
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202
Query: 154 QEIG-YDCVADMWSLGITALEMAEGKPPYGD----IHPMRAIFMIPTKPPPSFREPDVWT 208
G Y+ DM+SLGI EM P+ ++ ++ + + + PP F + +
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKV 259
Query: 209 PEFIDFVSRCLVKNPEERATASEMLN 234
+ I + + +P +R A +LN
Sbjct: 260 EKKI--IRLLIDHDPNKRPGARTLLN 283
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 43/237 (18%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH- 65
P ++ G K +L +VME+ G ++ + L K + D + +G+ YLH
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRV--LSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 66 --LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
+ IHRD+K+ S L+ +++ + ++ K+
Sbjct: 124 EAIVPIIHRDLKS-SNILILQKVENGDLSNKIL------------------------KIT 158
Query: 124 DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGD 183
DFG+A + T + + G WMAPEVI+ + +D+WS G+ E+ G+ P+
Sbjct: 159 DFGLAREWHRT--TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
Query: 184 IHPMRAIFMIPTK----PPPSFREPDVWTPE-FIDFVSRCLVKNPEERATASEMLNH 235
I + + + P PS PE F + C +P R + + +L+
Sbjct: 217 IDGLAVAYGVAMNKLALPIPST------CPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ K L++D + ++ L+GL+Y+H IHRD
Sbjct: 96 NDVYLVTHLMGA-DLNNIVKCAK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 146
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+A D M
Sbjct: 147 ---------------------------LKPSNLAVNEDCELKILDFGLARHTDDEM---T 176
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 297 QALAHAYFAQYHDPD 311
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 132 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 219 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 21/151 (13%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYD-CVADM 164
+K NIL++ G KL+DFG + + D K + GT +M PE E Y+ D+
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDI 235
Query: 165 WSLGITALEMAEGKPPY----------GDI------HPM-RAIFMIPTKPPPSFREPDVW 207
WSLGI M P+ +I +P+ R F+ P S +
Sbjct: 236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFL 295
Query: 208 TPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ E IDF+ L KNP ER T+ + L HE++
Sbjct: 296 SNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 72 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 131 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 218 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 133 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 159
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 220 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 61/258 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTL--------------- 45
++Q + P+V+K YG+ ++ L +++EY GS+ +R +K
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 46 -SEDEIATILCDTL-------KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVIT 97
DE A + D + +G++YL + +HRD
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD------------------------ 175
Query: 98 NQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGTPFWMAPEVIQE 155
L A NIL+ K++DFG++ + D+ KR+ WMA E + +
Sbjct: 176 ---------LAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 156 IGYDCVADMWSLGITALEMAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDF 214
Y +D+WS G+ E+ G PY I P R ++ T PD + E
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG--HRMERPDNCSEEMYRL 284
Query: 215 VSRCLVKNPEERATASEM 232
+ +C + P++R +++
Sbjct: 285 MLQCWKQEPDKRPVFADI 302
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 49/241 (20%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y +L IV ++C S+ + +++ ++ I T +G++YLH + IHR
Sbjct: 97 FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHR 156
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D +K+ NI L+ K+ DFG+A +
Sbjct: 157 D---------------------------------MKSNNIFLHEGLTVKIGDFGLATVKS 183
Query: 133 DTMAKRNTV--IGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + +D++S GI E+ G+ PY I+
Sbjct: 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR 243
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEMLNHEFIQR 240
+ IFM+ + PD+ P+ + V+ C+ K EER ++L+ + +
Sbjct: 244 DQIIFMVGR----GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299
Query: 241 H 241
H
Sbjct: 300 H 300
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 130 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 217 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P VV G + + IV+E+ G++ +R + ++ +L G
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +HRD L A NIL+N+
Sbjct: 158 MRYLADMGYVHRD---------------------------------LAARNILVNSNLVC 184
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ + D T G W APE IQ + +D+WS GI E M+
Sbjct: 185 KVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 244
Query: 177 GKPPYGDI 184
G+ PY D+
Sbjct: 245 GERPYWDM 252
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 137 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 163
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 224 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKSQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DFG+ D M
Sbjct: 151 ---------------------------LKPSNLAVNEDSELKILDFGLCRHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 41/229 (17%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + ++ I T +G++YLH + IHR
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 132
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A +
Sbjct: 133 D---------------------------------LKSNNIFLHEDNTVKIGDFGLATVKS 159
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ Y +D+++ GI E+ G+ PY +I+
Sbjct: 160 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 219
Query: 188 RAIFMIPTKP--PPSFREPDVWTPEFID-FVSRCLVKNPEERATASEML 233
I + + P + P+ + ++ CL K +ER + +L
Sbjct: 220 DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 72 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 131 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 218 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 61/258 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTL--------------- 45
++Q + P+V+K YG+ ++ L +++EY GS+ +R +K
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 46 -SEDEIATILCDTL-------KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVIT 97
DE A + D + +G++YL + +HRD
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD------------------------ 175
Query: 98 NQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGTPFWMAPEVIQE 155
L A NIL+ K++DFG++ + D+ KR+ WMA E + +
Sbjct: 176 ---------LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD 226
Query: 156 IGYDCVADMWSLGITALEMAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDF 214
Y +D+WS G+ E+ G PY I P R ++ T PD + E
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG--HRMERPDNCSEEMYRL 284
Query: 215 VSRCLVKNPEERATASEM 232
+ +C + P++R +++
Sbjct: 285 MLQCWKQEPDKRPVFADI 302
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 75 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 134 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 160
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 161 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 221 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 130
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A +
Sbjct: 131 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATVKS 157
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 158 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 218 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 266
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 79/206 (38%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P ++ G K + I+ EY GS+ +R + ++ +L G
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 129 MKYLSDMSYVHRD---------------------------------LAARNILVNSNLVC 155
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W APE I + +D+WS GI E M+
Sbjct: 156 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 215
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY D+ I I PPP
Sbjct: 216 GERPYWDMSNQDVIKAIEEGYRLPPP 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 79/206 (38%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P ++ G K + I+ EY GS+ +R + ++ +L G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 123 MKYLSDMSYVHRD---------------------------------LAARNILVNSNLVC 149
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W APE I + +D+WS GI E M+
Sbjct: 150 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 209
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY D+ I I PPP
Sbjct: 210 GERPYWDMSNQDVIKAIEEGYRLPPP 235
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ D+G+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDYGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A +
Sbjct: 129 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATVKS 155
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 216 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 48/216 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTL-KGLEYLHLRRKIHRDIKAGSGT 80
L+I ME+C G++ + R+ + +A L + + KG++Y+H ++ IHRD
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRD------- 161
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI L K+ DFG+ L + KR
Sbjct: 162 --------------------------LKPSNIFLVDTKQVKIGDFGLVTSLKND-GKRTR 194
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPS 200
GT +M+PE I Y D+++LG+ E+ +H F +K
Sbjct: 195 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL---------LHVCDTAFE-TSKFFTD 244
Query: 201 FRE---PDVWTPEFIDFVSRCLVKNPEERATASEML 233
R+ D++ + + + L K PE+R SE+L
Sbjct: 245 LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A +
Sbjct: 134 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATVKS 160
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 221 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 39/221 (17%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
+++V+EYC G + D + + + LSE+E + + + Y+H + HRD
Sbjct: 83 IFMVLEYCPGGELFDYI-ISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRD-------- 133
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKR-NT 140
LK N+L + KL DFG+ + T
Sbjct: 134 -------------------------LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT 168
Query: 141 VIGTPFWMAPEVIQEIGY-DCVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPP 199
G+ + APE+IQ Y AD+WS+GI + G P+ D + M A++ +
Sbjct: 169 CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-ALYKKIMR--G 225
Query: 200 SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
+ P +P I + + L +P++R + +LNH +I +
Sbjct: 226 KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 133
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A +
Sbjct: 134 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATVKS 160
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 161 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 221 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 41/229 (17%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 156
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A +
Sbjct: 157 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATVKS 183
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 184 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 188 -RAIFMIPTK-PPPSFREPDVWTPEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ P + P+ + ++ CL K +ER ++L
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 75/258 (29%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
+++++V GA +++I++ + LS++ + ++ L+GL+Y+H IHRD
Sbjct: 98 SEVYLVTTLMGA-DLNNIVKC--QALSDEHVQFLVYQLLRGLKYIHSAGIIHRD------ 148
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + ++ DFG+A Q + M
Sbjct: 149 ---------------------------LKPSNVAVNEDCELRILDFGLARQADEEM---T 178
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ +GK P I ++ I +
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVG 238
Query: 196 KPPPS----------------------------FREPDVWTPEFIDFVSRCLVKNPEERA 227
P P FR + P ID + R LV + ++R
Sbjct: 239 TPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGAN---PLAIDLLGRMLVLDSDQRV 295
Query: 228 TASEMLNHE-FIQRHDTD 244
+A+E L H F Q HD +
Sbjct: 296 SAAEALAHAYFSQYHDPE 313
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 155
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A +
Sbjct: 156 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATVKS 182
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 183 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 243 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 29/162 (17%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE-VIQEIGYDCVADMW 165
+K NIL++ G KL DFG A L + + T ++ APE ++ ++ Y D+W
Sbjct: 150 IKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVW 209
Query: 166 SLGITALEMAEGKPPY---GDIHPMRAIFMIPTKPPPSFREPDVWTPEF----------- 211
++G EM G+P + DI + I M P +E P F
Sbjct: 210 AIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKER 269
Query: 212 --------------IDFVSRCLVKNPEERATASEMLNHEFIQ 239
ID +CL +P++R +E+L+H+F Q
Sbjct: 270 EPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 49/233 (21%)
Query: 13 YGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHR 72
+ Y L IV ++C S+ + + + ++ I T +G++YLH + IHR
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHR 128
Query: 73 DIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT 132
D LK+ NI L+ + K+ DFG+A +
Sbjct: 129 D---------------------------------LKSNNIFLHEDLTVKIGDFGLATVKS 155
Query: 133 DTMAKRN--TVIGTPFWMAPEVIQ---EIGYDCVADMWSLGITALEMAEGKPPYGDIHPM 187
+ G+ WMAPEVI+ + Y +D+++ GI E+ G+ PY +I+
Sbjct: 156 RWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 188 -RAIFMIPTKPPPSFREPDVWT-----PEFID-FVSRCLVKNPEERATASEML 233
+ IFM+ + PD+ P+ + ++ CL K +ER ++L
Sbjct: 216 DQIIFMVGR----GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 97/259 (37%), Gaps = 88/259 (33%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 124 VQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 169
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA----------GQLTDTMAK 137
LK N+L+NT K+ DFG+A G LT+ +A
Sbjct: 170 -------------------LKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 138 RNTVIGTPFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMI 193
R ++ APE+ + GY D+WS+G EM +P + H + I I
Sbjct: 211 R-------WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
Query: 194 PTKPP-------------------PSFREPDVWTPEF-------IDFVSRCLVKNPEERA 227
P PS + W F +D + R L NP +R
Sbjct: 264 LGSPSQEDLNCIINMKARNYLQSLPS-KTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRI 322
Query: 228 TASEMLNHEFIQRHDTDPS 246
T E L H +++++ DP+
Sbjct: 323 TVEEALAHPYLEQY-YDPT 340
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ YG K ++I+ EY G + + +R + ++ + D + +EYL ++
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD L A N L+N +G K++DFG++
Sbjct: 141 FLHRD---------------------------------LAARNCLVNDQGVVKVSDFGLS 167
Query: 129 GQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPY 181
+ D + + +G+ F W PEV+ + +D+W+ G+ E+ + GK PY
Sbjct: 168 RYVLDD--EETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 132 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 219 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 98/261 (37%), Gaps = 75/261 (28%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA D+ +L K + LS D I L L+GL+Y+H +HRD
Sbjct: 120 DVYLVTHLMGA----DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD------ 169
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMA 136
LK N+LLNT K+ DFG VA D
Sbjct: 170 ---------------------------LKPSNLLLNTTXDLKICDFGLARVADPDHDHTG 202
Query: 137 KRNTVIGTPFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFM 192
+ T ++ APE+ + GY D+WS+G EM +P + H + I
Sbjct: 203 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
Query: 193 IPTKP--------------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEE 225
I P P + P W F +D + + L NP +
Sbjct: 263 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHK 320
Query: 226 RATASEMLNHEFIQRHDTDPS 246
R + L H +++++ DPS
Sbjct: 321 RIEVEQALAHPYLEQY-YDPS 340
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 61/258 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTL--------------- 45
++Q + P+V+K YG+ ++ L +++EY GS+ +R +K
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 46 -SEDEIATILCDTL-------KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVIT 97
DE A + D + +G++YL +HRD
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRD------------------------ 175
Query: 98 NQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGTPFWMAPEVIQE 155
L A NIL+ K++DFG++ + D+ KR+ WMA E + +
Sbjct: 176 ---------LAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFD 226
Query: 156 IGYDCVADMWSLGITALEMAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDF 214
Y +D+WS G+ E+ G PY I P R ++ T PD + E
Sbjct: 227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG--HRMERPDNCSEEMYRL 284
Query: 215 VSRCLVKNPEERATASEM 232
+ +C + P++R +++
Sbjct: 285 MLQCWKQEPDKRPVFADI 302
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 11/190 (5%)
Query: 10 VKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRK 69
VKY+G + + ++ E G I R ++I + LK L YL
Sbjct: 99 VKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSL 158
Query: 70 IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAG 129
H D+K + L + I +T+ ++R K+ I KL DFG A
Sbjct: 159 THTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGI--------KLIDFGCAT 210
Query: 130 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRA 189
+D ++I T + APEVI +G+D +DMWS G E+ G + M
Sbjct: 211 FKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH 267
Query: 190 IFMIPTKPPP 199
+ M+ + P
Sbjct: 268 LAMMESIIQP 277
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ YG K ++I+ EY G + + +R + ++ + D + +EYL ++
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD L A N L+N +G K++DFG++
Sbjct: 121 FLHRD---------------------------------LAARNCLVNDQGVVKVSDFGLS 147
Query: 129 GQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPY 181
+ D + + +G+ F W PEV+ + +D+W+ G+ E+ + GK PY
Sbjct: 148 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV E GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGAVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 75 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 134 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 160
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 161 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 221 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ YG K ++I+ EY G + + +R + ++ + D + +EYL ++
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD L A N L+N +G K++DFG++
Sbjct: 125 FLHRD---------------------------------LAARNCLVNDQGVVKVSDFGLS 151
Query: 129 GQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPY 181
+ D + + +G+ F W PEV+ + +D+W+ G+ E+ + GK PY
Sbjct: 152 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++M+ G + D +R K + + KG
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 132 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 219 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ YG K ++I+ EY G + + +R + ++ + D + +EYL ++
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD L A N L+N +G K++DFG++
Sbjct: 126 FLHRD---------------------------------LAARNCLVNDQGVVKVSDFGLS 152
Query: 129 GQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPY 181
+ D + + +G+ F W PEV+ + +D+W+ G+ E+ + GK PY
Sbjct: 153 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 58/225 (25%)
Query: 45 LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTL 104
L + I ++ L+GL++LH +HRD
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRD------------------------------- 137
Query: 105 FRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NIL+ + G KLADFG+A + MA + V+ T ++ APEV+ + Y DM
Sbjct: 138 --LKPENILVTSGGTVKLADFGLARIYSYQMAL-DPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 165 WSLGITALEMAEGKP--------------------PYGDIHPMRAIFMIPTKPPPSFREP 204
WS+G EM KP P D P PP R
Sbjct: 195 WSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPV 254
Query: 205 DVWTPEFIDFVSRCLVK----NPEERATASEMLNHEFIQRHDTDP 245
PE + ++ L++ NP +R +A L H ++ + + +P
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
L+IV EY GS+ D +R R ++ L D + D + +EYL +HRD
Sbjct: 81 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD------- 133
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L A N+L++ + AK++DFG+ + + T
Sbjct: 134 --------------------------LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 167
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI 190
+ W APE ++E + +D+WS GI E+ + G+ PY I P++ +
Sbjct: 168 PVK---WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDV 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ YG K ++I+ EY G + + +R + ++ + D + +EYL ++
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD L A N L+N +G K++DFG++
Sbjct: 141 FLHRD---------------------------------LAARNCLVNDQGVVKVSDFGLS 167
Query: 129 GQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPY 181
+ D + + +G+ F W PEV+ + +D+W+ G+ E+ + GK PY
Sbjct: 168 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 58/225 (25%)
Query: 45 LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTL 104
L + I ++ L+GL++LH +HRD
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRD------------------------------- 137
Query: 105 FRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NIL+ + G KLADFG+A + MA V+ T ++ APEV+ + Y DM
Sbjct: 138 --LKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-TLWYRAPEVLLQSTYATPVDM 194
Query: 165 WSLGITALEMAEGKP--------------------PYGDIHPMRAIFMIPTKPPPSFREP 204
WS+G EM KP P D P PP R
Sbjct: 195 WSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPV 254
Query: 205 DVWTPEFIDFVSRCLVK----NPEERATASEMLNHEFIQRHDTDP 245
PE + ++ L++ NP +R +A L H ++ + + +P
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMW 165
+K NIL++ + A L DFG+A TD + + +GT ++ APE E AD++
Sbjct: 160 VKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIY 219
Query: 166 SLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPE 224
+L E G PPY GD + + P PS P + F ++R KNPE
Sbjct: 220 ALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPV-AFDAVIARGXAKNPE 278
Query: 225 ER 226
+R
Sbjct: 279 DR 280
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 38/177 (21%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTLKGLEYL 64
P++ + + + L+ VMEY G D+M ++ E + GL +L
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
+ I+RD LK N++L++EGH K+AD
Sbjct: 459 QSKGIIYRD---------------------------------LKLDNVMLDSEGHIKIAD 485
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
FG+ + GTP ++APE+I Y D W+ G+ EM G+ P+
Sbjct: 486 FGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 58/225 (25%)
Query: 45 LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTL 104
L + I ++ L+GL++LH +HRD
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANCIVHRD------------------------------- 145
Query: 105 FRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NIL+ + G KLADFG+A + MA V+ T ++ APEV+ + Y DM
Sbjct: 146 --LKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV-TLWYRAPEVLLQSTYATPVDM 202
Query: 165 WSLGITALEMAEGKP--------------------PYGDIHPMRAIFMIPTKPPPSFREP 204
WS+G EM KP P D P PP R
Sbjct: 203 WSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPV 262
Query: 205 DVWTPEFIDFVSRCLVK----NPEERATASEMLNHEFIQRHDTDP 245
PE + ++ L++ NP +R +A L H ++ + + +P
Sbjct: 263 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 307
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 47/253 (18%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D ++ + + ++ L++VMEY G + ++ + + + L + + ++ +
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H +HRDI K NILL+ GH +LAD
Sbjct: 179 HRLGYVHRDI---------------------------------KPDNILLDRCGHIRLAD 205
Query: 125 FGVAGQL-TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-------DMWSLGITALEMAE 176
FG +L D + +GTP +++PE++Q +G D W+LG+ A EM
Sbjct: 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY 265
Query: 177 GKPP-YGDIHPMRAIFMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEE---RATASE 231
G+ P Y D ++ K S D PE DF+ R L PE R A +
Sbjct: 266 GQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGRGGAGD 324
Query: 232 MLNHEFIQRHDTD 244
H F D D
Sbjct: 325 FRTHPFFFGLDWD 337
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ YG K ++I+ EY G + + +R + ++ + D + +EYL ++
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD L A N L+N +G K++DFG++
Sbjct: 132 FLHRD---------------------------------LAARNCLVNDQGVVKVSDFGLS 158
Query: 129 GQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPY 181
+ D + + +G+ F W PEV+ + +D+W+ G+ E+ + GK PY
Sbjct: 159 RYVLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 38/177 (21%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTLKGLEYL 64
P++ + + + L+ VMEY G D+M ++ E + GL +L
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
+ I+RD LK N++L++EGH K+AD
Sbjct: 138 QSKGIIYRD---------------------------------LKLDNVMLDSEGHIKIAD 164
Query: 125 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
FG+ + GTP ++APE+I Y D W+ G+ EM G+ P+
Sbjct: 165 FGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ FG+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILGFGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV E GS+ +R + ++ +L G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 131 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 157
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 217
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 218 GERPYWEMSNQDVIKAVDEGYRLPPP 243
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 80/206 (38%), Gaps = 40/206 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G K+ + IV E GS+ +R + ++ +L G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W +PE I + +D+WS GI E M+
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY 246
Query: 177 GKPPYGDIHPMRAIFMIPTK---PPP 199
G+ PY ++ I + PPP
Sbjct: 247 GERPYWEMSNQDVIKAVDEGYRLPPP 272
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + +NT G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 58/225 (25%)
Query: 45 LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTL 104
L + I ++ L+GL++LH +HRD
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCIVHRD------------------------------- 137
Query: 105 FRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NIL+ + G KLADFG+A + MA V+ T ++ APEV+ + Y DM
Sbjct: 138 --LKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TLWYRAPEVLLQSTYATPVDM 194
Query: 165 WSLGITALEMAEGKP--------------------PYGDIHPMRAIFMIPTKPPPSFREP 204
WS+G EM KP P D P PP R
Sbjct: 195 WSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPV 254
Query: 205 DVWTPEFIDFVSRCLVK----NPEERATASEMLNHEFIQRHDTDP 245
PE + ++ L++ NP +R +A L H ++ + + +P
Sbjct: 255 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 39/197 (19%)
Query: 42 KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIY 101
K+ ++ +++ + +G+E+L R+ IHRD
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCIHRD---------------------------- 224
Query: 102 KTLFRLKAGNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGY 158
L A NILL+ K+ DFG+A + D + K +T + WMAPE I + Y
Sbjct: 225 -----LAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLK-WMAPESIFDKIY 278
Query: 159 DCVADMWSLGITALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSR 217
+D+WS G+ E+ + G PY + M F + R P+ TPE +
Sbjct: 279 STKSDVWSYGVLLWEIFSLGGSPYPGVQ-MDEDFCSRLREGMRMRAPEYSTPEIYQIMLD 337
Query: 218 CLVKNPEERATASEMLN 234
C ++P+ER +E++
Sbjct: 338 CWHRDPKERPRFAELVE 354
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 101/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + D M T + I + L L+
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 117 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 262
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 263 RSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 71/249 (28%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D ++VM + +D+ ++ SE++I ++ LKGL+Y+H +HRD
Sbjct: 103 DFYLVMPFMQ----TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK GN+ +N + K+ DFG+A A+
Sbjct: 152 --------------------------LKPGNLAVNEDCELKILDFGLARHAD---AEMTG 182
Query: 141 VIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGKPPY------------------ 181
+ T ++ APEVI + Y+ D+WS+G EM GK +
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 242
Query: 182 ---------GDIHPMRAIFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATAS 230
D I +P P F + P +P+ D + + L + ++R TA+
Sbjct: 243 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA-SPQAADLLEKMLELDVDKRLTAA 301
Query: 231 EMLNHEFIQ 239
+ L H F +
Sbjct: 302 QALTHPFFE 310
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 89/240 (37%), Gaps = 56/240 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTL-- 58
M+ +V+ Y + ++I+ EY GS+ D ++ DE +L L
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLK-------SDEGGKVLLPKLID 114
Query: 59 ------KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNI 112
+G+ Y+ + IHRD L+A N+
Sbjct: 115 FSAQIAEGMAYIERKNYIHRD---------------------------------LRAANV 141
Query: 113 LLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITA 171
L++ K+ADFG+A + D P W APE I + +D+WS GI
Sbjct: 142 LVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILL 201
Query: 172 LEMAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWT--PEFIDFVSRCLVKNPEERAT 228
E+ GK PY P R + T +R P V E D + C + EER T
Sbjct: 202 YEIVTYGKIPY----PGRTNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPT 257
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 101/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + D M T + I + L L+
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 118 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 144
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 263
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 264 RSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 133 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 159
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 220 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 71/249 (28%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D ++VM + +D+ ++ SE++I ++ LKGL+Y+H +HRD
Sbjct: 121 DFYLVMPFMQ----TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRD------- 169
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK GN+ +N + K+ DFG+A A+
Sbjct: 170 --------------------------LKPGNLAVNEDCELKILDFGLARHAD---AEMTG 200
Query: 141 VIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGKPPY------------------ 181
+ T ++ APEVI + Y+ D+WS+G EM GK +
Sbjct: 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGV 260
Query: 182 ---------GDIHPMRAIFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATAS 230
D I +P P F + P +P+ D + + L + ++R TA+
Sbjct: 261 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA-SPQAADLLEKMLELDVDKRLTAA 319
Query: 231 EMLNHEFIQ 239
+ L H F +
Sbjct: 320 QALTHPFFE 328
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 130 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 217 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 81 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 139
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 140 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 166
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 167 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 226
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 227 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ D G+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDAGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 96 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 154
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 155 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 181
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 182 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 241
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 242 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 130 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 217 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ DF +A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDFYLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 65 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 124 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 150
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 210
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 211 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 77 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 135
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 136 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 162
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 163 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 222
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 223 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 133 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 159
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 220 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 130 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 217 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 65/252 (25%)
Query: 19 NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGS 78
+T ++V E GS+ ++ ++K +E E + ++ D L++LH + HRD
Sbjct: 83 DTRFYLVFEKLQGGSILAHIQ-KQKHFNEREASRVVRDVAAALDFLHTKGIAHRD----- 136
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA---KLADF--GVAGQLTD 133
LK NIL + K+ DF G +L +
Sbjct: 137 ----------------------------LKPENILCESPEKVSPVKICDFDLGSGMKLNN 168
Query: 134 -----TMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMWSLGITALEMAEGKPPY-- 181
T + T G+ +MAPEV+ Q YD D+WSLG+ M G PP+
Sbjct: 169 SCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVG 228
Query: 182 ----------GDIHPMRAIFMIPTKPPPSFREPDV-W---TPEFIDFVSRCLVKNPEERA 227
G++ + + + + PD W + E D +S+ LV++ ++R
Sbjct: 229 HCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRL 288
Query: 228 TASEMLNHEFIQ 239
+A+++L H ++Q
Sbjct: 289 SAAQVLQHPWVQ 300
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 156 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 182
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 243 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 231 EML 233
+++
Sbjct: 301 QLV 303
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
L+IV EY GS+ D +R R ++ L D + D + +EYL +HRD
Sbjct: 90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD------- 142
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L A N+L++ + AK++DFG+ + + T
Sbjct: 143 --------------------------LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI 190
+ W APE ++E + +D+WS GI E+ + G+ PY I P++ +
Sbjct: 177 PVK---WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDV 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 132 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 219 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 137 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 163
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 224 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 133 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 159
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 220 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 39/241 (16%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P +VK + + ++VME G + + ++ +KK SE E + I+ + + ++H
Sbjct: 66 PNIVKLHEVFHDQLHTFLVMELLNGGELFERIK-KKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+HRD+K L D D IK + DFG
Sbjct: 125 VGVVHRDLKP-ENLLFTDENDNLEIK-----------------------------IIDFG 154
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYG---- 182
A T T + APE++ + GYD D+WSLG+ M G+ P+
Sbjct: 155 FARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR 214
Query: 183 DIHPMRAIFMIPTKPPPSFR-EPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ A+ ++ F E + W + E D + L +P +R S + +E++
Sbjct: 215 SLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274
Query: 239 Q 239
Q
Sbjct: 275 Q 275
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 39/171 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
L+IV EY GS+ D +R R ++ L D + D + +EYL +HRD
Sbjct: 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD------- 127
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L A N+L++ + AK++DFG+ + + T
Sbjct: 128 --------------------------LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 161
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI 190
+ W APE ++E + +D+WS GI E+ + G+ PY I P++ +
Sbjct: 162 PVK---WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDV 208
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 55/253 (21%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q +++ G K + I+ EY G++ +R + S ++ +L G
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 160 MKYLANMNYVHRD---------------------------------LAARNILVNSNLVC 186
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W APE I + +D+WS GI E M
Sbjct: 187 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY 246
Query: 177 GKPPYGDI---HPMRAI---FMIPTKPP-PS---------FREPDVWTPEFIDFVSRC-- 218
G+ PY ++ M+AI F +PT PS +++ P+F D VS
Sbjct: 247 GERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK 306
Query: 219 LVKNPEERATASE 231
L++ P+ T ++
Sbjct: 307 LIRAPDSLKTLAD 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ D G+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDRGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 130 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 217 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 137 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 163
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 224 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 65/235 (27%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIA-------------------TILC---DTLK 59
++++ EYC G + + +R +++ SEDEI +LC K
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+E+L + +HRD L A N+L+
Sbjct: 184 GMEFLEFKSCVHRD---------------------------------LAARNVLVTHGKV 210
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-----WMAPEVIQEIGYDCVADMWSLGITALEM 174
K+ DFG+A D M+ N V+ WMAPE + E Y +D+WS GI E+
Sbjct: 211 VKICDFGLA---RDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
Query: 175 -AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
+ G PY I P+ A F + +P T E + C + +R +
Sbjct: 268 FSLGVNPYPGI-PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 104/255 (40%), Gaps = 69/255 (27%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
D+++V GA +++I++ +K L++D + ++ L+GL+Y+H IHRD
Sbjct: 100 NDVYLVTHLMGA-DLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHRD------ 150
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 139
LK N+ +N + K+ D G+A D M
Sbjct: 151 ---------------------------LKPSNLAVNEDCELKILDGGLARHTDDEMTG-- 181
Query: 140 TVIGTPFWMAPEVIQE-IGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPT 195
+ T ++ APE++ + Y+ D+WS+G E+ G+ P I ++ I +
Sbjct: 182 -YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 196 KPP----------------------PSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 230
P P +V+ P +D + + LV + ++R TA+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 300
Query: 231 EMLNHE-FIQRHDTD 244
+ L H F Q HD D
Sbjct: 301 QALAHAYFAQYHDPD 315
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 90/235 (38%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ D P++VK G + WI+ME G + + K +L + K
Sbjct: 63 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 121
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +HRDI NIL+ +
Sbjct: 122 MAYLESINCVHRDIAVR---------------------------------NILVASPECV 148
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D + +V P WM+PE I + +D+W + E ++ GK
Sbjct: 149 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 208
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ + I ++ + +PD+ P ++RC +P +R +E++
Sbjct: 209 QPFFWLENKDVIGVL--EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 82 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 138
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 139 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 165
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 176 EGKPPY 181
G+ PY
Sbjct: 226 YGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 82 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 138
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 139 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 165
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 176 EGKPPY 181
G+ PY
Sbjct: 226 YGQKPY 231
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 105 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 164 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 190
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 191 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 250
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 251 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 80 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 136
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 137 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 163
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 164 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
Query: 176 EGKPPY 181
G+ PY
Sbjct: 224 YGQKPY 229
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 90/235 (38%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ D P++VK G + WI+ME G + + K +L + K
Sbjct: 79 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 137
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +HRDI NIL+ +
Sbjct: 138 MAYLESINCVHRDIAVR---------------------------------NILVASPECV 164
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D + +V P WM+PE I + +D+W + E ++ GK
Sbjct: 165 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 224
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ + I ++ + +PD+ P ++RC +P +R +E++
Sbjct: 225 QPFFWLENKDVIGVL--EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 62 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 118
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 119 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 145
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 176 EGKPPY 181
G+ PY
Sbjct: 206 YGQKPY 211
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 424 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 480
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 481 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 507
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 508 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
Query: 176 EGKPPY 181
G+ PY
Sbjct: 568 YGQKPY 573
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 46/230 (20%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
P V+ ++ + L++ E CG S+ +L E ++ L DTL L +LH
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
+ +H D+K NI L G KL DFG
Sbjct: 176 QGLVHLDVKPA---------------------------------NIFLGPRGRCKLGDFG 202
Query: 127 VAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA-EGKPPYG--D 183
+ +L T G P +MAPE++Q Y AD++SLG+T LE+A + P+G
Sbjct: 203 LLVEL-GTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG 260
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
+R ++ PP F + E + L +P+ RATA +L
Sbjct: 261 WQQLRQGYL-----PPEFTA--GLSSELRSVLVMMLEPDPKLRATAEALL 303
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 66 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 123 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 149
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 150 AKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 176 EGKPPY 181
G+ PY
Sbjct: 210 YGQKPY 215
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 90/235 (38%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M+ D P++VK G + WI+ME G + + K +L + K
Sbjct: 67 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +HRDI NIL+ +
Sbjct: 126 MAYLESINCVHRDIAVR---------------------------------NILVASPECV 152
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGK 178
KL DFG++ + D + +V P WM+PE I + +D+W + E ++ GK
Sbjct: 153 KLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
P+ + I ++ + +PD+ P ++RC +P +R +E++
Sbjct: 213 QPFFWLENKDVIGVL--EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 101/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + D M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPENLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 66 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 123 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 149
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 150 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 176 EGKPPY 181
G+ PY
Sbjct: 210 YGQKPY 215
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 145 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 171
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 172 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 231
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 232 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 289
Query: 231 EML 233
+++
Sbjct: 290 QLV 292
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 425 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 481
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 482 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 508
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 509 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
Query: 176 EGKPPY 181
G+ PY
Sbjct: 569 YGQKPY 574
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 149 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 175
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 176 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 235
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 236 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 293
Query: 231 EML 233
+++
Sbjct: 294 QLV 296
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 141 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 167
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 227
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 228 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 285
Query: 231 EML 233
+++
Sbjct: 286 QLV 288
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 72 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 128
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 129 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 155
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
Query: 176 EGKPPY 181
G+ PY
Sbjct: 216 YGQKPY 221
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 148 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 174
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 175 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 234
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 235 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 292
Query: 231 EML 233
+++
Sbjct: 293 QLV 295
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 156 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 182
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 243 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 231 EML 233
+++
Sbjct: 301 QLV 303
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 41/186 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLW-IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
MQQ D+PY+V+ G + W +VME G ++ ++ + + + + I ++
Sbjct: 60 MQQLDNPYIVRMIG--ICEAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSM 116
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G++YL +HRD L A N+LL T+ +
Sbjct: 117 GMKYLEESNFVHRD---------------------------------LAARNVLLVTQHY 143
Query: 120 AKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MA 175
AK++DFG++ L + K T P W APE I + +D+WS G+ E +
Sbjct: 144 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
Query: 176 EGKPPY 181
G+ PY
Sbjct: 204 YGQKPY 209
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 149
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 150 -------------------LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 309 AHPYLEQY-YDPS 320
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 156 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 182
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 243 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 231 EML 233
+++
Sbjct: 301 QLV 303
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 197 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 223
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 283
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 284 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 341
Query: 231 EML 233
+++
Sbjct: 342 QLV 344
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 153
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 154 -------------------LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 313 AHPYLEQY-YDPS 324
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 149
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 150 -------------------LKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 309 AHPYLEQY-YDPS 320
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 149
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 150 -------------------LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 309 AHPYLEQY-YDPS 320
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 153
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 154 -------------------LKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 313 AHPYLEQY-YDPS 324
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 132 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 219 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 44/225 (19%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
+++VMEYC G + + +K + C + GLEYLH + +H+DI
Sbjct: 83 MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDI------- 135
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN-- 139
K GN+LL T G K++ GVA L A
Sbjct: 136 --------------------------KPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 140 TVIGTPFWMAPEVIQEIGYDCVA----DMWSLGITALEMAEGKPPYGDIHPMRAIFMIPT 195
T G+P + PE+ G D + D+WS G+T + G P+ + + I
Sbjct: 170 TSQGSPAFQPPEIAN--GLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK 227
Query: 196 KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
S+ P P D + L P +R + ++ H + ++
Sbjct: 228 G---SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 109/278 (39%), Gaps = 84/278 (30%)
Query: 17 FKN-TDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDI 74
F+N +++I+ E +D+ R + + LS+D I + TL+ ++ LH IHRD
Sbjct: 83 FENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRD- 137
Query: 75 KAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT 134
LK N+L+N+ K+ DFG+A ++ D
Sbjct: 138 --------------------------------LKPSNLLINSNCDLKVCDFGLA-RIIDE 164
Query: 135 MAKRNT-----------VIGTPFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKP--P 180
A N+ + T ++ APEV + Y D+WS G E+ +P P
Sbjct: 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 181 YGDI-HPMRAIFMIPTKP----------PPSFRE-----------------PDVWTPEFI 212
D H + IF I P P RE P V P+ I
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV-NPKGI 283
Query: 213 DFVSRCLVKNPEERATASEMLNHEFIQR-HDTDPSQNG 249
D + R LV +P +R TA E L H ++Q HD + G
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEG 321
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 96/253 (37%), Gaps = 56/253 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G + IV EY GS+ +R + ++ +L G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +HRD L A N+L+++
Sbjct: 164 MRYLSDLGYVHRD---------------------------------LAARNVLVDSNLVC 190
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W APE I + +D+WS G+ E +A
Sbjct: 191 KVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 177 GKPPYGDIHPMRAIFMI--------PTKPPPSFRE--PDVW------TPEFIDFVS--RC 218
G+ PY ++ I + P P + + D W P F VS
Sbjct: 251 GERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
Query: 219 LVKNPEE-RATAS 230
L+++PE RATA+
Sbjct: 311 LIRSPESLRATAT 323
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 149
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 150 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 309 AHPYLEQY-YDPS 320
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 106 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 151
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 152 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 311 AHPYLEQY-YDPS 322
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 153
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 154 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 313 AHPYLEQY-YDPS 324
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 112 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 157
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 158 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 258
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 259 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 316
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 317 AHPYLEQY-YDPS 328
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 104 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 149
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 150 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 309 AHPYLEQY-YDPS 320
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 109 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 154
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 155 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 314 AHPYLEQY-YDPS 325
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 110 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 155
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 156 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 256
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 257 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 314
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 315 AHPYLEQY-YDPS 326
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 101 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 146
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 147 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 247
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 248 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 305
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 306 AHPYLEQY-YDPS 317
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 153
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 154 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 313 AHPYLEQY-YDPS 324
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 102 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 147
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 148 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQE 248
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 307 AHPYLEQY-YDPS 318
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 91/253 (35%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 106 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 151
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 152 -------------------LKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 253 DLNCGINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 234 NHEFIQRHDTDPS 246
H ++ ++ DPS
Sbjct: 311 AHPYLAQY-YDPS 322
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 48/216 (22%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTL-KGLEYLHLRRKIHRDIKAGSGT 80
L+I ME+C G++ + R+ + +A L + + KG++Y+H ++ I+RD
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRD------- 147
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI L K+ DFG+ L + KR
Sbjct: 148 --------------------------LKPSNIFLVDTKQVKIGDFGLVTSLKND-GKRXR 180
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPS 200
GT +M+PE I Y D+++LG+ E+ +H F +K
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL---------LHVCDTAFE-TSKFFTD 230
Query: 201 FRE---PDVWTPEFIDFVSRCLVKNPEERATASEML 233
R+ D++ + + + L K PE+R SE+L
Sbjct: 231 LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 109/278 (39%), Gaps = 84/278 (30%)
Query: 17 FKN-TDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDI 74
F+N +++I+ E +D+ R + + LS+D I + TL+ ++ LH IHRD
Sbjct: 83 FENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRD- 137
Query: 75 KAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT 134
LK N+L+N+ K+ DFG+A ++ D
Sbjct: 138 --------------------------------LKPSNLLINSNCDLKVCDFGLA-RIIDE 164
Query: 135 MAKRNT-----------VIGTPFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKP--P 180
A N+ + T ++ APEV + Y D+WS G E+ +P P
Sbjct: 165 SAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 181 YGDI-HPMRAIFMIPTKP----------PPSFRE-----------------PDVWTPEFI 212
D H + IF I P P RE P V P+ I
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV-NPKGI 283
Query: 213 DFVSRCLVKNPEERATASEMLNHEFIQR-HDTDPSQNG 249
D + R LV +P +R TA E L H ++Q HD + G
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEG 321
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 109/278 (39%), Gaps = 84/278 (30%)
Query: 17 FKN-TDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDI 74
F+N +++I+ E +D+ R + + LS+D I + TL+ ++ LH IHRD
Sbjct: 83 FENFNEVYIIQELMQ----TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRD- 137
Query: 75 KAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT 134
LK N+L+N+ K+ DFG+A ++ D
Sbjct: 138 --------------------------------LKPSNLLINSNCDLKVCDFGLA-RIIDE 164
Query: 135 MAKRNT-----------VIGTPFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKP--P 180
A N+ + T ++ APEV + Y D+WS G E+ +P P
Sbjct: 165 SAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224
Query: 181 YGDI-HPMRAIFMIPTKP----------PPSFRE-----------------PDVWTPEFI 212
D H + IF I P P RE P V P+ I
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV-NPKGI 283
Query: 213 DFVSRCLVKNPEERATASEMLNHEFIQR-HDTDPSQNG 249
D + R LV +P +R TA E L H ++Q HD + G
Sbjct: 284 DLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEG 321
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ YG K ++I+ EY G + + +R + ++ + D + +EYL ++
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD L A N L+N +G K++DFG++
Sbjct: 126 FLHRD---------------------------------LAARNCLVNDQGVVKVSDFGLS 152
Query: 129 GQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPY 181
+ D + + G+ F W PEV+ + +D+W+ G+ E+ + GK PY
Sbjct: 153 RYVLDD--EYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 124 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 169
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 170 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 329 AHPYLEQY-YDPS 340
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 102 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 147
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 148 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 248
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 307 AHPYLEQY-YDPS 318
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + ++ R+ + LS ++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 156 AYQVARGMEYLASKKCIHRD---------------------------------LAARNVL 182
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ + K+ADFG+A + + T G P WMAPE + + Y +D+WS G+
Sbjct: 183 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 242
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY + P+ +F + K +P T E + C P +R T
Sbjct: 243 WEIFTLGGSPYPGV-PVEELFKL-LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 300
Query: 231 EML 233
+++
Sbjct: 301 QLV 303
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 103/269 (38%), Gaps = 65/269 (24%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q P +V + + L +V EYC + ++ R ++ + E + +I TL+
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY-QRGVPEHLVKSITWQTLQA 114
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ + H IHRD+K NIL+
Sbjct: 115 VNFCHKHNCIHRDVKPE---------------------------------NILITKHSVI 141
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPE-VIQEIGYDCVADMWSLGITALEMAEGKP 179
KL DFG A LT + + T ++ +PE ++ + Y D+W++G E+ G P
Sbjct: 142 KLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVP 201
Query: 180 PY----------------GDIHP-MRAIF---------MIPTK---PPPSFREPDVWTPE 210
+ GD+ P + +F IP P + P++ P
Sbjct: 202 LWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPA 261
Query: 211 FIDFVSRCLVKNPEERATASEMLNHEFIQ 239
+ + CL +P ER T ++L+H + +
Sbjct: 262 -LGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 92/247 (37%), Gaps = 71/247 (28%)
Query: 35 SDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKC 93
+D+ +L K + LS D I L L+GL+Y+H +HRD
Sbjct: 114 TDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------------- 153
Query: 94 NVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGTPFWMAP 150
LK N+LLNT K+ DFG VA D + T ++ AP
Sbjct: 154 -------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 151 EV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--------- 197
E+ + GY D+WS+G EM +P + H + I I P
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 198 -----------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEMLNHEFIQ 239
P + P W F +D + + L NP +R + L H +++
Sbjct: 261 NLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
Query: 240 RHDTDPS 246
++ DPS
Sbjct: 319 QY-YDPS 324
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 130 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 157 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 217 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 91/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + KG
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 137 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 163
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 164 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 224 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 99/257 (38%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++S ++++ L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKP 197
V+ T ++ APEVI +GY D+WS+G+ EM +G P I + P
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 198 PPSFRE-------------------------PDVWTP-----------EFIDFVSRCLVK 221
P F + PDV P + D +S+ LV
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 222 NPEERATASEMLNHEFI 238
+ +R + E L H +I
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 96/253 (37%), Gaps = 56/253 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P +++ G + IV EY GS+ +R + ++ +L G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +HRD L A N+L+++
Sbjct: 164 MRYLSDLGYVHRD---------------------------------LAARNVLVDSNLVC 190
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-MAE 176
K++DFG++ L D T G W APE I + +D+WS G+ E +A
Sbjct: 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 177 GKPPYGDIHPMRAIFMI--------PTKPPPSFRE--PDVW------TPEFIDFVS--RC 218
G+ PY ++ I + P P + + D W P F VS
Sbjct: 251 GERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
Query: 219 LVKNPEE-RATAS 230
L+++PE RATA+
Sbjct: 311 LIRSPESLRATAT 323
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 39/236 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D+P+V + G +T + ++ + G + D +R K + + +G
Sbjct: 68 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEG 126
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ T H
Sbjct: 127 MNYLEDRRLVHRD---------------------------------LAARNVLVKTPQHV 153
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I Y +D+WS G+T E M G
Sbjct: 154 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 213
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 233
PY I P I I K +P + T + + +C + + + R E++
Sbjct: 214 SKPYDGI-PASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 108 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 153
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 154 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 313 AHPYLEQY-YDPS 324
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 92/253 (36%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 109 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 154
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 155 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 234 NHEFIQRHDTDPS 246
H +++++ DPS
Sbjct: 314 AHPYLEQY-YDPS 325
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q D P ++ G K+ + IV EY GS+ ++ + ++ +L G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
++YL +HRD L A NIL+N+
Sbjct: 137 MKYLSDMGYVHRD---------------------------------LAARNILINSNLVC 163
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEMAE- 176
K++DFG++ L D T G W APE I + +D+WS GI E+
Sbjct: 164 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSY 223
Query: 177 GKPPYGDI 184
G+ PY ++
Sbjct: 224 GERPYWEM 231
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 99/257 (38%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++S ++++ L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 152 --------------------------LKPSNIVVKSDATLKILDFGLA-RTAGTSFMMTP 184
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKP 197
+ T ++ APEVI +GY D+WS+G+ EM +G P I + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 198 PPSFRE-------------------------PDVWTP-----------EFIDFVSRCLVK 221
P F + PDV P + D +S+ LV
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 222 NPEERATASEMLNHEFI 238
+ +R + E L H +I
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 33/183 (18%)
Query: 102 KTLFR-LKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYD 159
K L R LK N+L+N G KL DFG+A + ++ + T ++ AP+V+ Y
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYS 187
Query: 160 CVADMWSLGITALEMAEGKPPY---GDIHPMRAIF----------------------MIP 194
D+WS G EM GKP + D ++ IF I
Sbjct: 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQ 247
Query: 195 TKPPPSFR---EPDVWTP---EFIDFVSRCLVKNPEERATASEMLNHEFIQRHDTDPSQN 248
+PP R +P P +DF+ L NP+ R +A + L+H + + S
Sbjct: 248 QRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHASMG 307
Query: 249 GGK 251
G +
Sbjct: 308 GSR 310
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 150 TYQLARGMEYLASQKCIHRD---------------------------------LTARNVL 176
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 177 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 236
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 237 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 294
Query: 231 EML 233
+++
Sbjct: 295 QLV 297
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 155 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 181
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 182 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 241
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 242 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 299
Query: 231 EML 233
+++
Sbjct: 300 QLV 302
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 91/253 (35%), Gaps = 76/253 (30%)
Query: 34 VSDIMR------LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLD 87
V D+M L+ + LS D I L L+GL+Y+H +HRD
Sbjct: 106 VQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD-------------- 151
Query: 88 YCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG---VAGQLTDTMAKRNTVIGT 144
LK N+LLNT K+ DFG VA D + T
Sbjct: 152 -------------------LKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 145 PFWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPYGDIH---PMRAIFMIPTKP--- 197
++ APE+ + GY D+WS+G EM +P + H + I I P
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 198 -----------------PPSFREPDVWTPEF-------IDFVSRCLVKNPEERATASEML 233
P + P W F +D + + L NP +R + L
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVP--WNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 234 NHEFIQRHDTDPS 246
H ++ ++ DPS
Sbjct: 311 AHPYLAQY-YDPS 322
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 152 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 178
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 179 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 238
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 239 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 296
Query: 231 EML 233
+++
Sbjct: 297 QLV 299
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 209 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 235
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 295
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 296 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 353
Query: 231 EML 233
+++
Sbjct: 354 QLV 356
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 42/208 (20%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q + P +++ G + + I+ E+ G++ +RL + ++ +L G
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +HRD L A NIL+N+
Sbjct: 131 MRYLAEMSYVHRD---------------------------------LAARNILVNSNLVC 157
Query: 121 KLADFGVAGQLTDTMA--KRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-M 174
K++DFG++ L + + + +G W APE I + +D WS GI E M
Sbjct: 158 KVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
Query: 175 AEGKPPYGDIHPMRAIFMIPTK---PPP 199
+ G+ PY D+ I I PPP
Sbjct: 218 SFGERPYWDMSNQDVINAIEQDYRLPPP 245
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 54/245 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR----LRKKTLSEDEIATILCD 56
+ + + P +VK YG+ L VMEY GS+ +++ L T + + C
Sbjct: 56 LSRVNHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 57 TLKGLEYLHLRRK---IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+ YLH + IHRD+K + LV AG +
Sbjct: 114 --QGVAYLHSMQPKALIHRDLKPPNLLLV--------------------------AGGTV 145
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALE 173
L K+ DFG A + M G+ WMAPEV + Y D++S GI E
Sbjct: 146 L------KICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGSNYSEKCDVFSWGIILWE 196
Query: 174 MAEGKPPYGDIH--PMRAIFMI--PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 229
+ + P+ +I R ++ + T+PP P ++RC K+P +R +
Sbjct: 197 VITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK----PIESLMTRCWSKDPSQRPSM 252
Query: 230 SEMLN 234
E++
Sbjct: 253 EEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 99/245 (40%), Gaps = 54/245 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR----LRKKTLSEDEIATILCD 56
+ + + P +VK YG+ L VMEY GS+ +++ L T + + C
Sbjct: 55 LSRVNHPNIVKLYGACLNPVCL--VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 57 TLKGLEYLHLRRK---IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+ YLH + IHRD+K + LV AG +
Sbjct: 113 --QGVAYLHSMQPKALIHRDLKPPNLLLV--------------------------AGGTV 144
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALE 173
L K+ DFG A + M G+ WMAPEV + Y D++S GI E
Sbjct: 145 L------KICDFGTACDIQTHMTNNK---GSAAWMAPEVFEGSNYSEKCDVFSWGIILWE 195
Query: 174 MAEGKPPYGDIH--PMRAIFMI--PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 229
+ + P+ +I R ++ + T+PP P ++RC K+P +R +
Sbjct: 196 VITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK----PIESLMTRCWSKDPSQRPSM 251
Query: 230 SEMLN 234
E++
Sbjct: 252 EEIVK 256
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLSFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 116 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 142
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 143 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 261
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 262 RSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 99/267 (37%), Gaps = 62/267 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P +VK L++V E+ + + + I + L L+G
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L + H R +HRD LK N+L+NTEG
Sbjct: 115 LAFCHSHRVLHRD---------------------------------LKPQNLLINTEGAI 141
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK- 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
Query: 179 --PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF------------ 214
P +I + IF P P PD + P F DF
Sbjct: 202 LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDGR 260
Query: 215 --VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 SLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 122 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 148
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 149 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 209 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 267
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 268 RSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 99/267 (37%), Gaps = 62/267 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+++ + P +VK L++V E+ + + + I + L L+G
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L + H R +HRD LK N+L+NTEG
Sbjct: 119 LAFCHSHRVLHRD---------------------------------LKPQNLLINTEGAI 145
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK- 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 146 KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
Query: 179 --PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF------------ 214
P +I + IF P P PD + P F DF
Sbjct: 206 LFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDGR 264
Query: 215 --VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 265 SLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 114 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 140
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 259
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 260 RSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 116 GLAFCHSHRVLHRD---------------------------------LKPENLLINTEGA 142
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 143 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 261
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 262 RSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 114 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 140
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 259
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 260 RSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 40/172 (23%)
Query: 8 YVVKYYGSY--FKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
+++KY G L +VMEY GS+ D L + ++ ++ +G+ YLH
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY--LPRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+ IHRD L A N+LL+ + K+ DF
Sbjct: 152 AQHYIHRD---------------------------------LAARNVLLDNDRLVKIGDF 178
Query: 126 GVAGQLTDTMAK---RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
G+A + + R FW APE ++E + +D+WS G+T E+
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 63 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 122 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 148
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 149 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 209 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 267
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 268 RSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 43/243 (17%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLS---EDEIATILCDTLKGLEYL 64
+VV+Y+ ++ ++ + I EYC GS++D + + +S E E+ +L +GL Y+
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 65 HLRRKIHRDIKAG----SGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
H +H DIK S T + + + + +N K +F
Sbjct: 128 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN---KVMF--------------- 169
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV--ADMWSLGITALEM--AE 176
K+ D G +++ + G ++A EV+QE Y + AD+++L +T + AE
Sbjct: 170 KIGDLGHVTRISSPQVEE----GDSRFLANEVLQE-NYTHLPKADIFALALTVVXAAGAE 224
Query: 177 GKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
P GD H +R + P R P V + EF + + + +PE R +A ++ H
Sbjct: 225 PLPRNGDQWHEIRQ-----GRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 276
Query: 236 EFI 238
+
Sbjct: 277 SVL 279
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 118 GLAFCHSHRVLHRD---------------------------------LKPENLLINTEGA 144
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 263
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 264 RSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 119 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 145
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 146 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 206 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 264
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 265 RSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 114 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 140
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 141 IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 259
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 260 RSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 90/236 (38%), Gaps = 67/236 (28%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+ L+ + + L L+GL+Y+H + IHRD
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD----------------------------- 183
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN----TVIGTPFWMAPEVIQEIG- 157
LK N+L+N K+ DFG+A L + A+ + T ++ APE++ +
Sbjct: 184 ----LKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 239
Query: 158 YDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKPPPSF------------- 201
Y D+WS+G EM + P +H ++ I M+ P P+
Sbjct: 240 YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYI 299
Query: 202 -----REPDVWTPEF-------IDFVSRCLVKNPEERATASEMLNHEFIQR-HDTD 244
R+P W + + + R L P R +A+ L H F+ + HD D
Sbjct: 300 QSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 355
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 116 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 142
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 143 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 261
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 262 RSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 39/236 (16%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
++ + S+ +L ++ E+ + + + L+E EI + + + L++LH
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
H DI+ N IY+T ++ I K+ +FG A
Sbjct: 123 IGHFDIRP--------------------ENIIYQTR---RSSTI--------KIIEFGQA 151
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
QL R + P + APEV Q DMWSLG + G P+ +
Sbjct: 152 RQLKPGDNFR-LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210
Query: 189 AIFMIP----TKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
I I T +F+E + E +DFV R LVK + R TASE L H ++++
Sbjct: 211 IIENIMNAEYTFDEEAFKEISI---EAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 118 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 144
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 263
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 264 RSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 117 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 262
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 263 RSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 116 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 142
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 143 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 261
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 262 RSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 118 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 144
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 263
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 264 RSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 115 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 141
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 142 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 202 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 260
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 261 RSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 42/208 (20%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M Q + P +++ G + + I+ E+ G++ +RL + ++ +L G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +HRD L A NIL+N+
Sbjct: 129 MRYLAEMSYVHRD---------------------------------LAARNILVNSNLVC 155
Query: 121 KLADFGVAGQLTDTMA--KRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALE-M 174
K++DFG++ L + + + +G W APE I + +D WS GI E M
Sbjct: 156 KVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
Query: 175 AEGKPPYGDIHPMRAIFMIPTK---PPP 199
+ G+ PY D+ I I PPP
Sbjct: 216 SFGERPYWDMSNQDVINAIEQDYRLPPP 243
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 119 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 145
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 146 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 206 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 264
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 265 RSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 90/236 (38%), Gaps = 67/236 (28%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+ L+ + + L L+GL+Y+H + IHRD
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD----------------------------- 184
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN----TVIGTPFWMAPEVIQEIG- 157
LK N+L+N K+ DFG+A L + A+ + T ++ APE++ +
Sbjct: 185 ----LKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE 240
Query: 158 YDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKPPPSF------------- 201
Y D+WS+G EM + P +H ++ I M+ P P+
Sbjct: 241 YTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYI 300
Query: 202 -----REPDVWTPEF-------IDFVSRCLVKNPEERATASEMLNHEFIQR-HDTD 244
R+P W + + + R L P R +A+ L H F+ + HD D
Sbjct: 301 QSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPD 356
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 114 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 140
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 141 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 259
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 260 RSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 117 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 262
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 263 RSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 114 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 140
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 141 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 201 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 259
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 260 RSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++EY G++ + +R R+ + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ ++ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 30/238 (12%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V G+ + ++ EYC G + + +R + + L D I TL + LH
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH-AKLADFGV 127
++ + + + + K N I++ + A N+LL T GH AK+ DFG+
Sbjct: 172 QVAQG------------MAFLASK-----NCIHRDV---AARNVLL-TNGHVAKIGDFGL 210
Query: 128 AGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
A + ++ + K N + WMAPE I + Y +D+WS GI E+ + G PY
Sbjct: 211 ARDIMNDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRH 241
I + + F K +P + C P R T ++ + F+Q
Sbjct: 270 I-LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQ 324
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 117 GLAFCHSHRVLHRD---------------------------------LKPENLLINTEGA 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 144 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 204 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 262
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 263 RSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 116 GLAFCHSHRVLHRD---------------------------------LKPENLLINTEGA 142
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 143 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 203 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 261
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 262 RSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 93/235 (39%), Gaps = 47/235 (20%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 121 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 147
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEMA- 175
K+ADFG+A + D A+ G F W APE I + +D+WS GI E+
Sbjct: 148 CKIADFGLARLIED--AEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
Query: 176 EGKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
G+ PY + I + +R PD E + C + PE+R T
Sbjct: 206 HGRIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 34/234 (14%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSED---EIATILCDTLKGLEY 63
P ++ G+ L++ +EY G++ D +R + + L D IA TL +
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQQL 141
Query: 64 LHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLA 123
LH + R +DY S K + N L A NIL+ AK+A
Sbjct: 142 LHFAADVARG------------MDYLSQKQFIHRN--------LAARNILVGENYVAKIA 181
Query: 124 DFGVA-GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-GKPPY 181
DFG++ GQ + K+ WMA E + Y +D+WS G+ E+ G PY
Sbjct: 182 DFGLSRGQ--EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
Query: 182 GDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATASEML 233
+ + K P +R +P E D + +C + P ER + +++L
Sbjct: 240 CGM----TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 100/268 (37%), Gaps = 64/268 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
+++ + P +VK L++V E+ + M T + I + L L+
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
GL + H R +HRD LK N+L+NTEG
Sbjct: 118 GLAFCHSHRVLHRD---------------------------------LKPQNLLINTEGA 144
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGK 178
KLADFG+A + + T ++ APE++ Y A D+WSLG EM +
Sbjct: 145 IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
Query: 179 ---PPYGDIHPMRAIFMIPTKP-----PPSFREPDVWTPEF-----IDF----------- 214
P +I + IF P P PD + P F DF
Sbjct: 205 ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD-YKPSFPKWARQDFSKVVPPLDEDG 263
Query: 215 ---VSRCLVKNPEERATASEMLNHEFIQ 239
+S+ L +P +R +A L H F Q
Sbjct: 264 RSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 73/187 (39%), Gaps = 36/187 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q P +V+ G + ++IVME G +R L + ++ D G
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+EYL + IHRD L A N L+ +
Sbjct: 226 MEYLESKCCIHRD---------------------------------LAARNCLVTEKNVL 252
Query: 121 KLADFGVAGQLTDTM-AKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K++DFG++ + D + A + P W APE + Y +D+WS GI E + G
Sbjct: 253 KISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLG 312
Query: 178 KPPYGDI 184
PY ++
Sbjct: 313 ASPYPNL 319
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 73/187 (39%), Gaps = 36/187 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
++Q P +V+ G + ++IVME G +R L + ++ D G
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+EYL + IHRD L A N L+ +
Sbjct: 226 MEYLESKCCIHRD---------------------------------LAARNCLVTEKNVL 252
Query: 121 KLADFGVAGQLTDTM-AKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K++DFG++ + D + A + P W APE + Y +D+WS GI E + G
Sbjct: 253 KISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLG 312
Query: 178 KPPYGDI 184
PY ++
Sbjct: 313 ASPYPNL 319
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 92/241 (38%), Gaps = 37/241 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M P +V + ++ + ++ ++ E+ G + + + +SEDE + KG
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L ++H +H D+K + +F K N L
Sbjct: 268 LCHMHENNYVHLDLKPEN------------------------IMFTTKRSNEL------- 296
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG+ L D GT + APEV + DMWS+G+ + + G P
Sbjct: 297 KLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
Query: 181 YG---DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
+G D +R + S + + DF+ + L+ +P R T + L H +
Sbjct: 356 FGGENDDETLRNVKSCDWNMDDSAFSG--ISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413
Query: 238 I 238
+
Sbjct: 414 L 414
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 43/243 (17%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLS---EDEIATILCDTLKGLEYL 64
+VV+Y+ ++ ++ + I EYC GS++D + + +S E E+ +L +GL Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 65 HLRRKIHRDIKAG----SGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
H +H DIK S T + + + + +N K +F
Sbjct: 130 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN---KVMF--------------- 171
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV--ADMWSLGITAL--EMAE 176
K+ D G +++ + G ++A EV+QE Y + AD+++L +T + AE
Sbjct: 172 KIGDLGHVTRISSPQVEE----GDSRFLANEVLQE-NYTHLPKADIFALALTVVCAAGAE 226
Query: 177 GKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
P GD H +R + P R P V + EF + + + +PE R +A ++ H
Sbjct: 227 PLPRNGDQWHEIRQ-----GRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
Query: 236 EFI 238
+
Sbjct: 279 SVL 281
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 43/243 (17%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLS---EDEIATILCDTLKGLEYL 64
+VV+Y+ ++ ++ + I EYC GS++D + + +S E E+ +L +GL Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 65 HLRRKIHRDIKAG----SGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
H +H DIK S T + + + + +N K +F
Sbjct: 130 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN---KVMF--------------- 171
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV--ADMWSLGITAL--EMAE 176
K+ D G +++ + G ++A EV+QE Y + AD+++L +T + AE
Sbjct: 172 KIGDLGHVTRISSPQVEE----GDSRFLANEVLQE-NYTHLPKADIFALALTVVCAAGAE 226
Query: 177 GKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
P GD H +R + P R P V + EF + + + +PE R +A ++ H
Sbjct: 227 PLPRNGDQWHEIRQ-----GRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
Query: 236 EFI 238
+
Sbjct: 279 SVL 281
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKK-TLSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 70 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 129 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 155
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 156 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 215
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 216 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 264
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 43/243 (17%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLS---EDEIATILCDTLKGLEYL 64
+VV+Y+ ++ ++ + I EYC GS++D + + +S E E+ +L +GL Y+
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 65 HLRRKIHRDIKAG----SGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
H +H DIK S T + + + + +N K +F
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN---KVMF--------------- 173
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV--ADMWSLGITAL--EMAE 176
K+ D G +++ + G ++A EV+QE Y + AD+++L +T + AE
Sbjct: 174 KIGDLGHVTRISSPQVEE----GDSRFLANEVLQE-NYTHLPKADIFALALTVVCAAGAE 228
Query: 177 GKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
P GD H +R + P R P V + EF + + + +PE R +A ++ H
Sbjct: 229 PLPRNGDQWHEIRQ-----GRLP---RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280
Query: 236 EFI 238
+
Sbjct: 281 SVL 283
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 92/241 (38%), Gaps = 37/241 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M P +V + ++ + ++ ++ E+ G + + + +SEDE + KG
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 161
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
L ++H +H D+K + +F K N L
Sbjct: 162 LCHMHENNYVHLDLKPEN------------------------IMFTTKRSNEL------- 190
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPP 180
KL DFG+ L D GT + APEV + DMWS+G+ + + G P
Sbjct: 191 KLIDFGLTAHL-DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
Query: 181 YG---DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
+G D +R + S + + DF+ + L+ +P R T + L H +
Sbjct: 250 FGGENDDETLRNVKSCDWNMDDSAFSG--ISEDGKDFIRKLLLADPNTRMTIHQALEHPW 307
Query: 238 I 238
+
Sbjct: 308 L 308
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKK-TLSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 68 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 127 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 153
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 154 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 214 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++S ++++ L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLVGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 152 --------------------------LKPSNIVVKSDATLKILDFGLA-RTAGTSFMMTP 184
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKP 197
+ T ++ APEVI +GY D+WS+G EM +G P I + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 198 PPSFRE-------------------------PDVWTP-----------EFIDFVSRCLVK 221
P F + PDV P + D +S+ LV
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 222 NPEERATASEMLNHEFI 238
+ +R + E L H +I
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 121 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 147
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 148 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 208 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 58/246 (23%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIA 51
P ++ G+ L++ +EY G++ D +R + TLS ++
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 52 TILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
D +G++YL ++ IHRD L A N
Sbjct: 136 HFAADVARGMDYLSQKQFIHRD---------------------------------LAARN 162
Query: 112 ILLNTEGHAKLADFGVA-GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGIT 170
IL+ AK+ADFG++ GQ + K+ WMA E + Y +D+WS G+
Sbjct: 163 ILVGENYVAKIADFGLSRGQ--EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 220
Query: 171 ALEMAE-GKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERA 227
E+ G PY + + K P +R +P E D + +C + P ER
Sbjct: 221 LWEIVSLGGTPYCGM----TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 276
Query: 228 TASEML 233
+ +++L
Sbjct: 277 SFAQIL 282
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 71 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 130 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 156
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 157 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 216
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 217 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 265
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 50/216 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSE-DEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++I+ E+ GS+ D ++ + + ++ +G+ ++ R IHRD
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD------- 309
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL++ K+ADFG+A + D
Sbjct: 310 --------------------------LRAANILVSASLVCKIADFGLARVIEDNEYTARE 343
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-GKPPY-GDIHP--MRAI---FM 192
P W APE I + +D+WS GI +E+ G+ PY G +P +RA+ +
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR 403
Query: 193 IPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
+P P+ E + + RC PEER T
Sbjct: 404 MP--------RPENCPEELYNIMMRCWKNRPEERPT 431
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 64 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 123 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 149
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 150 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 210 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 258
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 58/246 (23%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIA 51
P ++ G+ L++ +EY G++ D +R + TLS ++
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 52 TILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
D +G++YL ++ IHRD L A N
Sbjct: 146 HFAADVARGMDYLSQKQFIHRD---------------------------------LAARN 172
Query: 112 ILLNTEGHAKLADFGVA-GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGIT 170
IL+ AK+ADFG++ GQ + K+ WMA E + Y +D+WS G+
Sbjct: 173 ILVGENYVAKIADFGLSRGQ--EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 230
Query: 171 ALEMAE-GKPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERA 227
E+ G PY + + K P +R +P E D + +C + P ER
Sbjct: 231 LWEIVSLGGTPYCGM----TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 286
Query: 228 TASEML 233
+ +++L
Sbjct: 287 SFAQIL 292
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 121 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 147
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 148 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 208 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 40/172 (23%)
Query: 8 YVVKYYGSYFKNTD--LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
+++KY G + L +VMEY GS+ D L + ++ ++ +G+ YLH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDY--LPRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+ IHR+ L A N+LL+ + K+ DF
Sbjct: 135 AQHYIHRN---------------------------------LAARNVLLDNDRLVKIGDF 161
Query: 126 GVAGQLTDTMAK---RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
G+A + + R FW APE ++E + +D+WS G+T E+
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 63 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 122 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 148
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 149 CKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 209 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 257
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 57 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 116 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 142
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 143 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 202
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 203 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 251
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKK-TLSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 72 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 131 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 157
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 158 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 218 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 266
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++S ++++ L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 152 --------------------------LKPSNIVVKSDATLKILDFGLA-RTAGTSFMMTP 184
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKP 197
+ T ++ APEVI +GY D+WS+G EM +G P I + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 198 PPSFRE-------------------------PDVWTP-----------EFIDFVSRCLVK 221
P F + PDV P + D +S+ LV
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 222 NPEERATASEMLNHEFI 238
+ +R + E L H +I
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 68 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 127 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 153
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 154 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 214 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 41/250 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D P++V+ G T + +V + G + + + K + + KG
Sbjct: 71 MASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 129
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ + H
Sbjct: 130 MMYLEERRLVHRD---------------------------------LAARNVLVKSPNHV 156
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + N G P WMA E I + +D+WS G+T E M G
Sbjct: 157 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 216
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
PY I P R I + K +P + T + + +C + + + R E L EF
Sbjct: 217 GKPYDGI-PTREIPDLLEK-GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKE-LAAEF 273
Query: 238 IQRHDTDPSQ 247
R DP +
Sbjct: 274 -SRMARDPQR 282
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 41/250 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D P++V+ G T + +V + G + + + K + + KG
Sbjct: 94 MASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 152
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL RR +HRD L A N+L+ + H
Sbjct: 153 MMYLEERRLVHRD---------------------------------LAARNVLVKSPNHV 179
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + N G P WMA E I + +D+WS G+T E M G
Sbjct: 180 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG 239
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
PY I P R I + K +P + T + + +C + + + R E L EF
Sbjct: 240 GKPYDGI-PTREIPDLLEK-GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKE-LAAEF 296
Query: 238 IQRHDTDPSQ 247
R DP +
Sbjct: 297 -SRMARDPQR 305
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 40/172 (23%)
Query: 8 YVVKYYGSYFKNTD--LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
+++KY G + L +VMEY GS+ D L + ++ ++ +G+ YLH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDY--LPRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+ IHR+ L A N+LL+ + K+ DF
Sbjct: 135 SQHYIHRN---------------------------------LAARNVLLDNDRLVKIGDF 161
Query: 126 GVAGQLTDTMAK---RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
G+A + + R FW APE ++E + +D+WS G+T E+
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++ Y G++ + +R R+ + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 67 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 126 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 152
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 153 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 213 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 261
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 104/252 (41%), Gaps = 58/252 (23%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
+ P V++Y+ + +I +E C A ++ + + + E T+L T GL +L
Sbjct: 76 EHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILL---NTEGHAK 121
H +HRD LK NIL+ N G K
Sbjct: 135 HSLNIVHRD---------------------------------LKPHNILISMPNAHGKIK 161
Query: 122 --LADFGVAGQLT---DTMAKRNTVIGTPFWMAPEVIQEIGYDC------VADMWSLG-I 169
++DFG+ +L + ++R+ V GT W+APE++ E DC D++S G +
Sbjct: 162 AMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE---DCKENPTYTVDIFSAGCV 218
Query: 170 TALEMAEGKPPYGDIHPMRAIFMIPTKPPPSF---REPDVWTPEFIDFVSRCLVKNPEER 226
++EG P+G +A ++ + DV E I+ + + +P++R
Sbjct: 219 FYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIE---KMIAMDPQKR 275
Query: 227 ATASEMLNHEFI 238
+A +L H F
Sbjct: 276 PSAKHVLKHPFF 287
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 89/240 (37%), Gaps = 56/240 (23%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTL-- 58
M+ +V+ Y K ++I+ E+ GS+ D ++ DE +L L
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK-------SDEGGKVLLPKLID 113
Query: 59 ------KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNI 112
+G+ Y+ + IHRD L+A N+
Sbjct: 114 FSAQIAEGMAYIERKNYIHRD---------------------------------LRAANV 140
Query: 113 LLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITA 171
L++ K+ADFG+A + D P W APE I + +++WS GI
Sbjct: 141 LVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILL 200
Query: 172 LEMAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWT--PEFIDFVSRCLVKNPEERAT 228
E+ GK PY P R + + +R P + E D + C + EER T
Sbjct: 201 YEIVTYGKIPY----PGRTNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPT 256
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 62 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHRD L+A NIL++
Sbjct: 121 GMAFIEERNYIHRD---------------------------------LRAANILVSDTLS 147
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 148 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 208 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++S ++++ L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKP 197
V+ T ++ APEVI +GY D+WS+G EM +G P I + P
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 198 PPSFRE-------------------------PDVWTP-----------EFIDFVSRCLVK 221
P F + PDV P + D +S+ LV
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 222 NPEERATASEMLNHEFI 238
+ +R + E L H +I
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 54/218 (24%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATIL---CDTLKGLEYLHLRRKIHRDIKAGS 78
++I+ E+ GS+ D L+ S+ + ++ +G+ ++ R IHRD
Sbjct: 84 IYIITEFMAKGSLLDF--LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD----- 136
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 138
L+A NIL++ K+ADFG+A + D
Sbjct: 137 ----------------------------LRAANILVSASLVCKIADFGLARVIEDNEYTA 168
Query: 139 NTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-GKPPY-GDIHP--MRAI--- 190
P W APE I + +D+WS GI +E+ G+ PY G +P +RA+
Sbjct: 169 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 228
Query: 191 FMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
+ +P P+ E + + RC PEER T
Sbjct: 229 YRMP--------RPENCPEELYNIMMRCWKNRPEERPT 258
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSE--------DEIATILCDTL 58
+VV+ G K +VME G + +R LR + + E+ + +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ YL+ ++ +HRD+ A + + +D I +T IY+T + K G LL
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFT--VKIGDFGMTRDIYETAYYRKGGKGLLPVR- 197
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
WMAPE +++ + +DMWS G+ E+
Sbjct: 198 ----------------------------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
+ PY + + + + +PD D + C NP+ R T E++N
Sbjct: 230 EQPYQGLSNEQVLKFVMDG--GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN--- 284
Query: 238 IQRHDTDPS 246
+ + D PS
Sbjct: 285 LLKDDLHPS 293
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 33/160 (20%)
Query: 24 IVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
+ MEYC G + + + L E I T+L D L YLH R IHRD+K
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPE---- 151
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 141
N++ + L K+ D G A +L D
Sbjct: 152 ------------NIVLQPGPQRLIH--------------KIIDLGYAKEL-DQGELCTEF 184
Query: 142 IGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
+GT ++APE++++ Y D WS G A E G P+
Sbjct: 185 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 33/160 (20%)
Query: 24 IVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
+ MEYC G + + + L E I T+L D L YLH R IHRD+K
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPE---- 150
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 141
N++ + L K+ D G A +L D
Sbjct: 151 ------------NIVLQPGPQRLIH--------------KIIDLGYAKEL-DQGELCTEF 183
Query: 142 IGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY 181
+GT ++APE++++ Y D WS G A E G P+
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 53/243 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
++ G+ ++ L++++ Y G++ + +R R+ + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+EYL ++ IHRD L A N+L
Sbjct: 163 TYQLARGMEYLASQKCIHRD---------------------------------LAARNVL 189
Query: 114 LNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITA 171
+ K+ADFG+A + + + T G P WMAPE + + Y +D+WS G+
Sbjct: 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 172 LEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 230
E+ G PY I P+ +F + K +P T E + C P +R T
Sbjct: 250 WEIFTLGGSPYPGI-PVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFK 307
Query: 231 EML 233
+++
Sbjct: 308 QLV 310
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 41/250 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M SPYV + G +T + +V + G + D +R + L ++ KG
Sbjct: 73 MAGVGSPYVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKG 131
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL R +HRD L A N+L+ + H
Sbjct: 132 MSYLEDVRLVHRD---------------------------------LAARNVLVKSPNHV 158
Query: 121 KLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEG 177
K+ DFG+A L + + G P WMA E I + +D+WS G+T E M G
Sbjct: 159 KITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFG 218
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
PY I P R I + K +P + T + + +C + + E R E+++ EF
Sbjct: 219 AKPYDGI-PAREIPDLLEK-GERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVS-EF 275
Query: 238 IQRHDTDPSQ 247
R DP +
Sbjct: 276 -SRMARDPQR 284
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 40/172 (23%)
Query: 9 VVKYYGSYFKN--TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G ++ + ++ME+ +GS+ + + K ++ + KG++YL
Sbjct: 85 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ +HRD L A N+L+ +E K+ DFG
Sbjct: 145 RQYVHRD---------------------------------LAARNVLVESEHQVKIGDFG 171
Query: 127 VAGQLTDTMAKRNTVIG---TP-FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ + +T + TV +P FW APE + + + +D+WS G+T E+
Sbjct: 172 LTKAI-ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 40/172 (23%)
Query: 9 VVKYYGSYFKN--TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHL 66
+VKY G ++ + ++ME+ +GS+ + + K ++ + KG++YL
Sbjct: 73 IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 67 RRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFG 126
R+ +HRD L A N+L+ +E K+ DFG
Sbjct: 133 RQYVHRD---------------------------------LAARNVLVESEHQVKIGDFG 159
Query: 127 VAGQLTDTMAKRNTVIG---TP-FWMAPEVIQEIGYDCVADMWSLGITALEM 174
+ + +T + TV +P FW APE + + + +D+WS G+T E+
Sbjct: 160 LTKAI-ETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 210
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 47/252 (18%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIA--------TILCD 56
D P V++YY S + L+I +E C ++ D++ K +S++ + ++L
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVE--SKNVSDENLKLQKEYNPISLLRQ 141
Query: 57 TLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
G+ +LH + IHRD+K N + T R A
Sbjct: 142 IASGVAHLHSLKIIHRDLKP--------------------QNILVSTSSRFTADQQTGAE 181
Query: 117 EGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEVIQEIGYDCVA---DMWSLG- 168
++DFG+ +L N GT W APE+++E + D++S+G
Sbjct: 182 NLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGC 241
Query: 169 ITALEMAEGKPPYGDIHP-----MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
+ +++GK P+GD + +R IF + R E D +S+ + +P
Sbjct: 242 VFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRS---LIAEATDLISQMIDHDP 298
Query: 224 EERATASEMLNH 235
+R TA ++L H
Sbjct: 299 LKRPTAMKVLRH 310
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 47/252 (18%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIA--------TILCD 56
D P V++YY S + L+I +E C ++ D++ K +S++ + ++L
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVE--SKNVSDENLKLQKEYNPISLLRQ 141
Query: 57 TLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
G+ +LH + IHRD+K N + T R A
Sbjct: 142 IASGVAHLHSLKIIHRDLKP--------------------QNILVSTSSRFTADQQTGAE 181
Query: 117 EGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEVIQEIGYDCVA---DMWSLG- 168
++DFG+ +L N GT W APE+++E + D++S+G
Sbjct: 182 NLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGC 241
Query: 169 ITALEMAEGKPPYGDIHP-----MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
+ +++GK P+GD + +R IF + R E D +S+ + +P
Sbjct: 242 VFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRS---LIAEATDLISQMIDHDP 298
Query: 224 EERATASEMLNH 235
+R TA ++L H
Sbjct: 299 LKRPTAMKVLRH 310
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 65/249 (26%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
++V E GS+ + +++ +E E + ++ D L++LH + HRD
Sbjct: 86 FYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNKGIAHRD-------- 136
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILL---NTEGHAKLADFGVAGQLT------ 132
LK NIL N K+ DFG+ +
Sbjct: 137 -------------------------LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCS 171
Query: 133 -DTMAKRNTVIGTPFWMAPEVIQEIG-----YDCVADMWSLGITALEMAEGKPPY----- 181
+ + T G+ +MAPEV++ YD D+WSLG+ + G PP+
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG 231
Query: 182 -------GDIHPMRAIFMIPTKPPPSFREPDV-W---TPEFIDFVSRCLVKNPEERATAS 230
G+ P + + + PD W + D +S+ LV++ ++R +A+
Sbjct: 232 SDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAA 291
Query: 231 EMLNHEFIQ 239
++L H ++Q
Sbjct: 292 QVLQHPWVQ 300
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 104/252 (41%), Gaps = 65/252 (25%)
Query: 10 VKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRK 69
+K GS+ T L+++ +Y GS+ D L+ TL + + ++ GL +LH
Sbjct: 101 IKGTGSW---TQLYLITDYHENGSLYDY--LKSTTLDAKSMLKLAYSSVSGLCHLHT--- 152
Query: 70 IHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAG 129
+I + G D LK+ NIL+ G +AD G+A
Sbjct: 153 ---EIFSTQGKPAIAHRD-------------------LKSKNILVKKNGTCCIADLGLAV 190
Query: 130 Q-LTDTMAKR---NTVIGTPFWMAPEVIQE------IGYDCVADMWSLGITALEMA---- 175
+ ++DT NT +GT +M PEV+ E +ADM+S G+ E+A
Sbjct: 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCV 250
Query: 176 ------EGKPPYGDIHP-------MRAIFMIPTKPPPSFREPDVWTP-----EFIDFVSR 217
E + PY D+ P MR I I K PSF P+ W+ + ++
Sbjct: 251 SGGIVEEYQLPYHDLVPSDPSYEDMREIVCI-KKLRPSF--PNRWSSDECLRQMGKLMTE 307
Query: 218 CLVKNPEERATA 229
C NP R TA
Sbjct: 308 CWAHNPASRLTA 319
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 30/238 (12%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V G+ + ++ EYC G + + +R + + L D I T + LH
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH-AKLADFGV 127
++ + + + + K N I++ + A N+LL T GH AK+ DFG+
Sbjct: 172 QVAQG------------MAFLASK-----NCIHRDV---AARNVLL-TNGHVAKIGDFGL 210
Query: 128 AGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
A + ++ + K N + WMAPE I + Y +D+WS GI E+ + G PY
Sbjct: 211 ARDIMNDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRH 241
I + + F K +P + C P R T ++ + F+Q
Sbjct: 270 I-LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQ 324
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSE--------DEIATILCDTL 58
+VV+ G K +VME G + +R LR + + E+ + +
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ YL+ ++ +HRD+ A + + +D I +T IY+T + K G LL
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFT--VKIGDFGMTRDIYETDYYRKGGKGLLPVR- 196
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
WMAPE +++ + +DMWS G+ E+
Sbjct: 197 ----------------------------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 228
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
+ PY + + + + +PD D + C NP+ R T E++N
Sbjct: 229 EQPYQGLSNEQVLKFVMDG--GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN--- 283
Query: 238 IQRHDTDPS 246
+ + D PS
Sbjct: 284 LLKDDLHPS 292
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++S ++++ L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA-NLSQVIQME---LDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 184
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKP 197
+ T ++ APEVI +GY D+WS+G EM +G P I + P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 198 PPSFRE-------------------------PDVWTP-----------EFIDFVSRCLVK 221
P F + PDV P + D +S+ LV
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 222 NPEERATASEMLNHEFI 238
+ +R + E L H +I
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 51/256 (19%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIA--------TILCD 56
D P V++YY S + L+I +E C ++ D++ K +S++ + ++L
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNL-NLQDLV--ESKNVSDENLKLQKEYNPISLLRQ 123
Query: 57 TLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
G+ +LH + IHRD+K N + T R A
Sbjct: 124 IASGVAHLHSLKIIHRDLKP--------------------QNILVSTSSRFTADQQTGAE 163
Query: 117 EGHAKLADFGVAGQLTDTMAKRNTVI----GTPFWMAPEVIQEIG-------YDCVADMW 165
++DFG+ +L + T + GT W APE+++E D++
Sbjct: 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF 223
Query: 166 SLG-ITALEMAEGKPPYGDIHP-----MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCL 219
S+G + +++GK P+GD + +R IF + R E D +S+ +
Sbjct: 224 SMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRS---LIAEATDLISQMI 280
Query: 220 VKNPEERATASEMLNH 235
+P +R TA ++L H
Sbjct: 281 DHDPLKRPTAMKVLRH 296
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLK 59
M+Q +V+ Y + ++I+ EY GS+ D ++ L+ +++ + +
Sbjct: 58 MKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ ++ R IHR+ L+A NIL++
Sbjct: 117 GMAFIEERNYIHRN---------------------------------LRAANILVSDTLS 143
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EG 177
K+ADFG+A + D P W APE I + +D+WS GI E+ G
Sbjct: 144 CKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 203
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERAT 228
+ PY + I + +R PD E + C + PE+R T
Sbjct: 204 RIPYPGMTNPEVIQNLER----GYRMVRPDNCPEELYQLMRLCWKERPEDRPT 252
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 96/249 (38%), Gaps = 46/249 (18%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSE--------DEIATILCDTL 58
+VV+ G K +VME G + +R LR + + E+ + +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ YL+ ++ +HRD+ A + + +D I +T IY+T + K G LL
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFT--VKIGDFGMTRDIYETDYYRKGGKGLLPVR- 197
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
WMAPE +++ + +DMWS G+ E+
Sbjct: 198 ----------------------------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
+ PY + + + + +PD D + C NP+ R T E++N
Sbjct: 230 EQPYQGLSNEQVLKFVMDG--GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN--- 284
Query: 238 IQRHDTDPS 246
+ + D PS
Sbjct: 285 LLKDDLHPS 293
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV+EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 139
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 140 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 234 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 261
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 105/267 (39%), Gaps = 39/267 (14%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRL----RKKTLSEDEIATILCD 56
M++ P + + Y Y + +VME C G + D + + + D + T +C
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 57 TLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITN---QIYKTLFRL------ 107
+ + + GS + LD+ + +I+N QI+ L L
Sbjct: 142 C----------PECNEEAINGSIHGFRESLDFVQ-REKLISNIMRQIFSALHYLHNQGIC 190
Query: 108 ----KAGNILLNTEG--HAKLADFGVAGQL----TDTMAKRNTVIGTPFWMAPEVIQEIG 157
K N L +T KL DFG++ + T GTP+++APEV+
Sbjct: 191 HRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250
Query: 158 --YDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREP--DVWTPEFID 213
Y D WS G+ + G P+ ++ I + K F P +V +P D
Sbjct: 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK-KLCFENPNYNVLSPLARD 309
Query: 214 FVSRCLVKNPEERATASEMLNHEFIQR 240
+S L +N +ER A L H +I +
Sbjct: 310 LLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 68/257 (26%)
Query: 14 GSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRD 73
GS + ++IV EY ++++ L + L E+ + L+GL+Y+H +HRD
Sbjct: 89 GSLTELNSVYIVQEYMET-DLANV--LEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRD 145
Query: 74 IKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA-KLADFGVAGQLT 132
LK N+ +NTE K+ DFG+A +
Sbjct: 146 ---------------------------------LKPANLFINTEDLVLKIGDFGLARIMD 172
Query: 133 DTMAKRNTV---IGTPFWMAPEVI-QEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMR 188
+ + + + T ++ +P ++ Y DMW+ G EM GK + H +
Sbjct: 173 PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232
Query: 189 AIFMIPTKPP--------------PSFREPDVWTP-------------EFIDFVSRCLVK 221
+ +I P P + D+ P E +DF+ + L
Sbjct: 233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTF 292
Query: 222 NPEERATASEMLNHEFI 238
+P +R TA E L+H ++
Sbjct: 293 SPMDRLTAEEALSHPYM 309
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 102/257 (39%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ L + ++ +L L G+++LH IHRD
Sbjct: 101 DVYLVMELMDA----NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 149
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 150 --------------------------LKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY 183
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY-GDIHPMR----------- 188
V+ T ++ APEVI +GY D+WS+G E+ +G + G H +
Sbjct: 184 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 242
Query: 189 -AIFMI-------------PTKPPPSFRE--PD-----------VWTPEFIDFVSRCLVK 221
A FM P P +F E PD + T + D +S+ LV
Sbjct: 243 SAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 302
Query: 222 NPEERATASEMLNHEFI 238
+P++R + E L H +I
Sbjct: 303 DPDKRISVDEALRHPYI 319
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 153
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 154 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 249
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 250 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 94/240 (39%), Gaps = 56/240 (23%)
Query: 19 NTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGS 78
+T LW++ Y GS+ D L+++TL + GL +LH+ +I
Sbjct: 78 STQLWLITHYHEHGSLYDF--LQRQTLEPHLALRLAVSAACGLAHLHV------EIFGTQ 129
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA---GQLTDTM 135
G D+ K+ N+L+ + +AD G+A Q +D +
Sbjct: 130 GKPAIAHRDF-------------------KSRNVLVKSNLQCCIADLGLAVMHSQGSDYL 170
Query: 136 -AKRNTVIGTPFWMAPEVIQE-IGYDCV-----ADMWSLGITALEMA----------EGK 178
N +GT +MAPEV+ E I DC D+W+ G+ E+A + +
Sbjct: 171 DIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYR 230
Query: 179 PPYGDIHP-------MRAIFMIPTKPP--PSFREPDVWTPEFIDFVSRCLVKNPEERATA 229
PP+ D+ P M+ + + + P P+ D + C NP R TA
Sbjct: 231 PPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTA 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 158
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 159 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 254
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 255 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I++E+ G++ D +R ++ +S + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 121 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 147
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 148 VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I P + ++ + P+ + + + C NP +R + +E+
Sbjct: 208 MSPYPGIDPSQVYELL--EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 157
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 158 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 194
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 253
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 254 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 101 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 150
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 151 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 187
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 188 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 246
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 247 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 50/251 (19%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSE--------DEIATILCDTL 58
+VV+ G K +VME G + +R LR + + E+ + +
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ YL+ ++ +HRD+ A + + +D F +K G
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHD--------------------FTVKIG-------- 169
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITALEMAE 176
DFG+ + +T R G P WMAPE +++ + +DMWS G+ E+
Sbjct: 170 -----DFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
Query: 177 -GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ PY + + + + +PD D + C NP+ R T E++N
Sbjct: 225 LAEQPYQGLSNEQVLKFVMDG--GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN- 281
Query: 236 EFIQRHDTDPS 246
+ + D PS
Sbjct: 282 --LLKDDLHPS 290
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 158
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 159 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 254
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 255 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 155
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 156 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 192
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 251
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 252 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 83/217 (38%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV+EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 87 IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 139
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 140 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 234 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 261
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 157
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTD---TMAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 158 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKT 194
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 253
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 254 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 98/251 (39%), Gaps = 50/251 (19%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSE--------DEIATILCDTL 58
+VV+ G K +VME G + +R LR + + E+ + +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ YL+ ++ +HRD+ A + + +D F +K G
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHD--------------------FTVKIG-------- 172
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITALEMAE 176
DFG+ + +T R G P WMAPE +++ + +DMWS G+ E+
Sbjct: 173 -----DFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
Query: 177 -GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ PY + + + + +PD D + C NP+ R T E++N
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDG--GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN- 284
Query: 236 EFIQRHDTDPS 246
+ + D PS
Sbjct: 285 --LLKDDLHPS 293
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 98/266 (36%), Gaps = 70/266 (26%)
Query: 1 MQQCDSPYVVKYYGSYF-------------KNTDLWIVMEYCGAGSVSDIMRLRKKTLSE 47
+ + YVV+YY ++ K + L+I EYC ++ D++
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR 115
Query: 48 DEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRL 107
DE + L+ L Y+H + IHR+ L
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRN---------------------------------L 142
Query: 108 KAGNILLNTEGHAKLADFGVAGQLTDTM--------------AKRNTVIGTPFWMAPEVI 153
K NI ++ + K+ DFG+A + ++ + IGT ++A EV+
Sbjct: 143 KPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVL 202
Query: 154 QEIG-YDCVADMWSLGITALE----MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWT 208
G Y+ D +SLGI E + G + +R+ + + PP F +
Sbjct: 203 DGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRS---VSIEFPPDFDDNKXKV 259
Query: 209 PEFIDFVSRCLVKNPEERATASEMLN 234
+ I + + +P +R A +LN
Sbjct: 260 EKKI--IRLLIDHDPNKRPGARTLLN 283
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 156
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 157 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 193
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 252
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 253 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 128 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 177
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 178 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 214
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 215 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 273
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 274 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG++YL ++ +HRD
Sbjct: 127 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRD---------- 176
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 177 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 213
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 214 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 272
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 273 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 96/257 (37%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK---PPYGDIHPMRAIFMIPTKP 197
V+ T ++ APEVI +GY D+WS+G EM +G P I + P
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 198 PPSFRE-------------------------PDVWTP-----------EFIDFVSRCLVK 221
P F + PDV P + D +S+ LV
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 222 NPEERATASEMLNHEFI 238
+ +R + E L H +I
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 305
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 306 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K PEER T
Sbjct: 400 MPCPPE---------CPESLHDLMCQCWRKEPEERPT 427
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IVMEY G + D ++ K L ++ + G+ Y+ +HRD
Sbjct: 87 IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 139
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 140 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 234 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 261
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 64/218 (29%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSE-DEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++I+ E+ GS+ D ++ + + ++ +G+ ++ R IHRD
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD------- 303
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL++ K+ADFG+A
Sbjct: 304 --------------------------LRAANILVSASLVCKIADFGLAR----------- 326
Query: 141 VIGTPF---WMAPEVIQEIGYDCVADMWSLGITALEMAE-GKPPY-GDIHP--MRAI--- 190
+G F W APE I + +D+WS GI +E+ G+ PY G +P +RA+
Sbjct: 327 -VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 385
Query: 191 FMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
+ +P P+ E + + RC PEER T
Sbjct: 386 YRMP--------RPENCPEELYNIMMRCWKNRPEERPT 415
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 50/251 (19%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSE--------DEIATILCDTL 58
+VV+ G K +VME G + +R LR + + E+ + +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ YL+ ++ +HRD+ A + + +D F +K G
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHD--------------------FTVKIG-------- 172
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGITALEMAE 176
DFG+ + +T R G P WMAPE +++ + +DMWS G+ E+
Sbjct: 173 -----DFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
Query: 177 -GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 235
+ PY + + + + +PD D + C NP R T E++N
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDG--GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVN- 284
Query: 236 EFIQRHDTDPS 246
+ + D PS
Sbjct: 285 --LLKDDLHPS 293
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 253 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 305
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 306 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K PEER T
Sbjct: 400 MPCPPE---------CPESLHDLMCQCWRKEPEERPT 427
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 107 LKAGNILL-NTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NILL N + A K+ DFG + QL + + I + F+ +PEV+ + YD DM
Sbjct: 185 LKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---XIQSRFYRSPEVLLGMPYDLAIDM 241
Query: 165 WSLGITALEMAEGKPPY---GDIHPMRAIFMIPTKPP 198
WSLG +EM G+P + ++ M I + PP
Sbjct: 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 38/157 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPE 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
V+ T ++ APEVI +GY D+WS+G EM +G
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 94/258 (36%), Gaps = 72/258 (27%)
Query: 3 QCDSPYVVK----YYGSYFKNTDLWIVMEYCGAGSV-SDIMRLRKKTLSEDEIATILCDT 57
QC P++V+ Y Y L IVME G + S I + +E E + I+
Sbjct: 69 QC--PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 58 LKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTE 117
+ ++YLH HRD+K + L Y S + N I
Sbjct: 127 GEAIQYLHSINIAHRDVKP-------ENLLYTSKRPNAI--------------------- 158
Query: 118 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
KL DFG A + T YD DMWSLG+ + G
Sbjct: 159 --LKLTDFGFAKETTGE----------------------KYDKSCDMWSLGVIMYILLCG 194
Query: 178 KPPYGDIHPMRAIFMIPTK--------PPPSFREPDVWTPEFIDFVSRCLVKN-PEERAT 228
PP+ H + + T+ P P + E E + + R L+K P +R T
Sbjct: 195 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE----VSEEVKMLIRNLLKTEPTQRMT 250
Query: 229 ASEMLNHEFIQRHDTDPS 246
+E +NH +I + P
Sbjct: 251 ITEFMNHPWIMQSTKVPQ 268
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 107 LKAGNILL-NTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NILL N + A K+ DFG + QL + + I + F+ +PEV+ + YD DM
Sbjct: 185 LKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQ---XIQSRFYRSPEVLLGMPYDLAIDM 241
Query: 165 WSLGITALEMAEGKPPY---GDIHPMRAIFMIPTKPP 198
WSLG +EM G+P + ++ M I + PP
Sbjct: 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 278
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 96 DVYLVMELMDA----NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD------- 144
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 145 --------------------------LKPSNIVVKSDXTLKILDFGLA-RTAGTSFMMTP 177
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYLVMELMDA----NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 152 --------------------------LKPSNIVVKSDXTLKILDFGLA-RTAGTSFMMTP 184
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 78 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 130
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 131 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 164
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 165 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 224
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 225 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 252
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 139
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 140 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 234 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 261
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 107 LKAGNILL-NTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NILL N + A K+ DFG + QL + + I + F+ +PEV+ + YD DM
Sbjct: 166 LKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ---XIQSRFYRSPEVLLGMPYDLAIDM 222
Query: 165 WSLGITALEMAEGKPPY---GDIHPMRAIFMIPTKPP 198
WSLG +EM G+P + ++ M I + PP
Sbjct: 223 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP 259
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYLVMELMDA----NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
V+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 40/172 (23%)
Query: 8 YVVKYYGSYFKNTD--LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
++VKY G + + +VMEY GS+ D L + + ++ +G+ YLH
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDY--LPRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+ IHR L A N+LL+ + K+ DF
Sbjct: 130 AQHYIHRA---------------------------------LAARNVLLDNDRLVKIGDF 156
Query: 126 GVAGQLTDTMAK---RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
G+A + + R FW APE ++E + +D+WS G+T E+
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 42/185 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTL 58
M +C +V+ G DL +V Y GS+ D + T LS I
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ +LH IHRDIK+ NILL+
Sbjct: 144 NGINFLHENHHIHRDIKSA---------------------------------NILLDEAF 170
Query: 119 HAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEM 174
AK++DFG+A + ++ A+ + ++GT +MAPE ++ EI +D++S G+ LE+
Sbjct: 171 TAKISDFGLA-RASEKFAQTVMXSRIVGTTAYMAPEALRGEITPK--SDIYSFGVVLLEI 227
Query: 175 AEGKP 179
G P
Sbjct: 228 ITGLP 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 40/172 (23%)
Query: 8 YVVKYYGSYFKNTD--LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLH 65
++VKY G + + +VMEY GS+ D L + + ++ +G+ YLH
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDY--LPRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 66 LRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADF 125
+ IHR L A N+LL+ + K+ DF
Sbjct: 129 AQHYIHRA---------------------------------LAARNVLLDNDRLVKIGDF 155
Query: 126 GVAGQLTDTMAK---RNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
G+A + + R FW APE ++E + +D+WS G+T E+
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 76 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 128
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 129 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 162
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 163 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 222
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 223 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 250
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 51/256 (19%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIA--------TILCD 56
D P V++YY S + L+I +E C ++ D++ K +S++ + ++L
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVE--SKNVSDENLKLQKEYNPISLLRQ 123
Query: 57 TLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNT 116
G+ +LH + IHRD+K N + T R A
Sbjct: 124 IASGVAHLHSLKIIHRDLKP--------------------QNILVSTSSRFTADQQTGAE 163
Query: 117 EGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEVIQEIG-------YDCVADMW 165
++DFG+ +L N GT W APE+++E D++
Sbjct: 164 NLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF 223
Query: 166 SLG-ITALEMAEGKPPYGDIHP-----MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCL 219
S+G + +++GK P+GD + +R IF + R E D +S+ +
Sbjct: 224 SMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRS---LIAEATDLISQMI 280
Query: 220 VKNPEERATASEMLNH 235
+P +R TA ++L H
Sbjct: 281 DHDPLKRPTAMKVLRH 296
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 139
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 140 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 234 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 261
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 388
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 389 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 482
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K PEER T
Sbjct: 483 MPCPPE---------CPESLHDLMCQCWRKEPEERPT 510
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 80 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 132
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 133 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 166
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 167 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 226
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K PEER T
Sbjct: 227 MPCPPE---------CPESLHDLMCQCWRKEPEERPT 254
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 38/157 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 184
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
+ T ++ APEVI +GY D+WS+G EM +G
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 91/235 (38%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ +S + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 121 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 147
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 148 VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I P + ++ + P+ + + + C NP +R + +E+
Sbjct: 208 MSPYPGIDPSQVYELL--EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 38/157 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 104 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 152
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 153 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
+ T ++ APEVI +GY D+WS+G EM +G
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 82/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 87 IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 139
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 140 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 234 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 261
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLRK-KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 253 IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 305
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+A + D
Sbjct: 306 --------------------------LRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 399
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K PEER T
Sbjct: 400 MPCPPE---------CPESLHDLMCQCWRKEPEERPT 427
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 54 LCDTLKGL--EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
L D LKG +YL L + + + SG +R++Y L+A N
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD--------------LRAAN 141
Query: 112 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGIT 170
IL+ K+ADFG+A + D P W APE + +D+WS GI
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 171 ALEM-AEGKPPYGDIHPMRAI------FMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKN 222
E+ +G+ PY + + + +P P PE + D + +C K
Sbjct: 202 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE---------CPESLHDLMCQCWRKE 252
Query: 223 PEERAT 228
PEER T
Sbjct: 253 PEERPT 258
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 94/246 (38%), Gaps = 41/246 (16%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D ++V+ G + L +V +Y GS+ D +R + L + KG+ YL
Sbjct: 73 DHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 131
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
+HR+ L A N+LL + ++AD
Sbjct: 132 EEHGMVHRN---------------------------------LAARNVLLKSPSQVQVAD 158
Query: 125 FGVAGQLT-DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPY 181
FGVA L D + TP WMA E I Y +D+WS G+T E M G PY
Sbjct: 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRH 241
+ ++ + +P + T + + +C + + R T E+ N EF R
Sbjct: 219 AGLRLAEVPDLL--EKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN-EFT-RM 274
Query: 242 DTDPSQ 247
DP +
Sbjct: 275 ARDPPR 280
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 54 LCDTLKGL--EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
L D LKG +YL L + + + SG +R++Y L+A N
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD--------------LRAAN 141
Query: 112 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGIT 170
IL+ K+ADFG+A + D P W APE + +D+WS GI
Sbjct: 142 ILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 171 ALEM-AEGKPPYGDIHPMRAI------FMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKN 222
E+ +G+ PY + + + +P P PE + D + +C K
Sbjct: 202 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE---------CPESLHDLMCQCWRKE 252
Query: 223 PEERAT 228
PEER T
Sbjct: 253 PEERPT 258
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ +S + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 121 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 147
Query: 120 AKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T DT W APE + + +D+W+ G+ E+A G
Sbjct: 148 VKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 207
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I P + ++ + P+ + + + C NP +R + +E+
Sbjct: 208 MSPYPGIDPSQVYELL--EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 125 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 151
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 152 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 42/185 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTL 58
M +C +V+ G DL +V Y GS+ D + T LS I
Sbjct: 78 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 137
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ +LH IHRDIK+ NILL+
Sbjct: 138 NGINFLHENHHIHRDIKSA---------------------------------NILLDEAF 164
Query: 119 HAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEM 174
AK++DFG+A + ++ A+ ++GT +MAPE ++ EI +D++S G+ LE+
Sbjct: 165 TAKISDFGLA-RASEKFAQXVMXXRIVGTTAYMAPEALRGEITPK--SDIYSFGVVLLEI 221
Query: 175 AEGKP 179
G P
Sbjct: 222 ITGLP 226
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG+++L ++ +HRD
Sbjct: 107 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD---------- 156
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 157 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 193
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 252
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 253 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 125 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 151
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 54 LCDTLKGL--EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
L D LKG +YL L + + + SG +R++Y L+A N
Sbjct: 89 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD--------------LRAAN 134
Query: 112 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGIT 170
IL+ K+ADFG+A + D P W APE + +D+WS GI
Sbjct: 135 ILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 194
Query: 171 ALEM-AEGKPPYGDIHPMRAI------FMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKN 222
E+ +G+ PY + + + +P P PE + D + +C K
Sbjct: 195 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE---------CPESLHDLMCQCWRKE 245
Query: 223 PEERAT 228
PEER T
Sbjct: 246 PEERPT 251
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG+++L ++ +HRD
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD---------- 158
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 159 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 254
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 255 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 34/186 (18%)
Query: 54 LCDTLKGL--EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
L D LKG +YL L + + + SG +R++Y L+A N
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD--------------LRAAN 144
Query: 112 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGIT 170
IL+ K+ADFG+A + D P W APE + +D+WS GI
Sbjct: 145 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 171 ALEM-AEGKPPYGDIHPMRAI------FMIPTKPPPSFREPDVWTPEFI-DFVSRCLVKN 222
E+ +G+ PY + + + +P P PE + D + +C K+
Sbjct: 205 LTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE---------CPESLHDLMCQCWRKD 255
Query: 223 PEERAT 228
PEER T
Sbjct: 256 PEERPT 261
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 123 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 149
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 150 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 35/175 (20%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
+Q+ P ++ ++ +++ +V ++ + I++ L+ I + TL+G
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQG 124
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
LEYLH +HRD LK N+LL+ G
Sbjct: 125 LEYLHQHWILHRD---------------------------------LKPNNLLLDENGVL 151
Query: 121 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWSLGITALEM 174
KLADFG+A + T ++ APE++ Y DMW++G E+
Sbjct: 152 KLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG+++L ++ +HRD
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD---------- 158
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 159 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 254
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 255 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG+++L ++ +HRD
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD---------- 159
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 160 -----------------------LAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 197 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 255
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 256 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 46/249 (18%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSE--------DEIATILCDTL 58
+VV+ G K +VME G + +R LR + + E+ + +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ YL+ ++ +HR++ A + + +D I +T IY+T + K G LL
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHDFT--VKIGDFGMTRDIYETDYYRKGGKGLLPVR- 197
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
WMAPE +++ + +DMWS G+ E+
Sbjct: 198 ----------------------------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 229
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
+ PY + + + + +PD D + C NP R T E++N
Sbjct: 230 EQPYQGLSNEQVLKFVMDG--GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVN--- 284
Query: 238 IQRHDTDPS 246
+ + D PS
Sbjct: 285 LLKDDLHPS 293
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 125 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 151
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG+++L ++ +HRD
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD---------- 159
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 160 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 196
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 197 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 255
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 256 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 46/249 (18%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSE--------DEIATILCDTL 58
+VV+ G K +VME G + +R LR + + E+ + +
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ YL+ ++ +HR++ A + + +D I +T IY+T + K G LL
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHDFT--VKIGDFGMTRDIYETDYYRKGGKGLLPVR- 198
Query: 119 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
WMAPE +++ + +DMWS G+ E+
Sbjct: 199 ----------------------------WMAPESLKDGVFTTSSDMWSFGVVLWEITSLA 230
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
+ PY + + + + +PD D + C NP R T E++N
Sbjct: 231 EQPYQGLSNEQVLKFVMDG--GYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVN--- 285
Query: 238 IQRHDTDPS 246
+ + D PS
Sbjct: 286 LLKDDLHPS 294
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 94/246 (38%), Gaps = 41/246 (16%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D ++V+ G + L +V +Y GS+ D +R + L + KG+ YL
Sbjct: 91 DHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 149
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
+HR+ L A N+LL + ++AD
Sbjct: 150 EEHGMVHRN---------------------------------LAARNVLLKSPSQVQVAD 176
Query: 125 FGVAGQLT-DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPY 181
FGVA L D + TP WMA E I Y +D+WS G+T E M G PY
Sbjct: 177 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 236
Query: 182 GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRH 241
+ ++ + +P + T + + +C + + R T E+ N EF R
Sbjct: 237 AGLRLAEVPDLL--EKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN-EFT-RM 292
Query: 242 DTDPSQ 247
DP +
Sbjct: 293 ARDPPR 298
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 124 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 150
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 125 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 151
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 125 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 151
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 125 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 151
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 125 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 151
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 42/185 (22%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTL 58
M +C +V+ G DL +V Y GS+ D + T LS I
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 59 KGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEG 118
G+ +LH IHRDIK+ NILL+
Sbjct: 144 NGINFLHENHHIHRDIKSA---------------------------------NILLDEAF 170
Query: 119 HAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEM 174
AK++DFG+A + ++ A+ ++GT +MAPE ++ EI +D++S G+ LE+
Sbjct: 171 TAKISDFGLA-RASEKFAQTVMXXRIVGTTAYMAPEALRGEITPK--SDIYSFGVVLLEI 227
Query: 175 AEGKP 179
G P
Sbjct: 228 ITGLP 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 38/157 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 105 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 153
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 154 --------------------------LKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPF 187
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEG 177
V+ T ++ APEVI +GY D+WS+G EM +G
Sbjct: 188 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG+++L ++ +HRD
Sbjct: 114 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD---------- 163
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 164 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 200
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 201 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 259
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 260 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 77/257 (29%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYLVMELMDA----NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGKPPY-GDIHPMR----------- 188
V+ T ++ APEVI +GY D+WS+G E+ +G + G H +
Sbjct: 186 VV-TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 189 -AIFMIPTKPP-------------------------PSFREPD-VWTPEFIDFVSRCLVK 221
A FM +P PS E D + T + D +S+ LV
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 222 NPEERATASEMLNHEFI 238
+P++R + E L H +I
Sbjct: 305 DPDKRISVDEALRHPYI 321
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 39/177 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLR 67
VVK+YG + ++ +EYC G + D R+ + E + + G+ YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 68 RKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGV 127
HRDI K N+LL+ + K++DFG+
Sbjct: 125 GITHRDI---------------------------------KPENLLLDERDNLKISDFGL 151
Query: 128 AGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCV-ADMWSLGITALEMAEGKPPY 181
A +R N + GT ++APE+++ + D+WS GI M G+ P+
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 254 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 306
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L+A NIL+ K+ADFG+ + D
Sbjct: 307 --------------------------LRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 341 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 400
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 401 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 428
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 42/217 (19%)
Query: 24 IVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVY 83
+V+ Y G + + +R + ++ KG+++L ++ +HRD
Sbjct: 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD---------- 217
Query: 84 DRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT---MAKRNT 140
L A N +L+ + K+ADFG+A + D T
Sbjct: 218 -----------------------LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 254
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALE-MAEGKPPYGDIHPMR-AIFMIPTKP 197
P WMA E +Q + +D+WS G+ E M G PPY D++ ++++ +
Sbjct: 255 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR- 313
Query: 198 PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+P+ + + +C E R + SE+++
Sbjct: 314 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 97/249 (38%), Gaps = 65/249 (26%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
++V E GS+ + +++ +E E + ++ D L++LH + HRD
Sbjct: 86 FYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNKGIAHRD-------- 136
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILL---NTEGHAKLADFGVAGQLT------ 132
LK NIL N K+ DF + +
Sbjct: 137 -------------------------LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171
Query: 133 -DTMAKRNTVIGTPFWMAPEVIQEIG-----YDCVADMWSLGITALEMAEGKPPY----- 181
+ + T G+ +MAPEV++ YD D+WSLG+ + G PP+
Sbjct: 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG 231
Query: 182 -------GDIHPMRAIFMIPTKPPPSFREPDV-W---TPEFIDFVSRCLVKNPEERATAS 230
G+ P + + + PD W + D +S+ LV++ ++R +A+
Sbjct: 232 SDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAA 291
Query: 231 EMLNHEFIQ 239
++L H ++Q
Sbjct: 292 QVLQHPWVQ 300
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 85/232 (36%), Gaps = 39/232 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D +++ YG + +V E GS+ D +R + ++ +G
Sbjct: 65 MHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +R IHRD L A N+LL T
Sbjct: 124 MGYLESKRFIHRD---------------------------------LAARNLLLATRDLV 150
Query: 121 KLADFGVAGQL--TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K+ DFG+ L D PF W APE ++ + +D W G+T EM
Sbjct: 151 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 210
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
G+ P+ ++ + + I K P+ + + + +C PE+R T
Sbjct: 211 GQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 81/217 (37%), Gaps = 52/217 (23%)
Query: 22 LWIVMEYCGAGSVSDIMRLR-KKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ K L ++ + G+ Y+ +HRD
Sbjct: 87 IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD------- 139
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L A NIL+ K+ADFG+A + D
Sbjct: 140 --------------------------LAAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGDIHPMRAI------FM 192
P W APE + +D+WS GI E+ +G+ PY + + +
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR 233
Query: 193 IPTKPPPSFREPDVWTPEFI-DFVSRCLVKNPEERAT 228
+P P PE + D + +C K+PEER T
Sbjct: 234 MPCPPE---------CPESLHDLMCQCWRKDPEERPT 261
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 85/232 (36%), Gaps = 39/232 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D +++ YG + +V E GS+ D +R + ++ +G
Sbjct: 75 MHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +R IHRD L A N+LL T
Sbjct: 134 MGYLESKRFIHRD---------------------------------LAARNLLLATRDLV 160
Query: 121 KLADFGVAGQL--TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM-AE 176
K+ DFG+ L D PF W APE ++ + +D W G+T EM
Sbjct: 161 KIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 220
Query: 177 GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
G+ P+ ++ + + I K P+ + + + +C PE+R T
Sbjct: 221 GQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 38/155 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
V+ T ++ APEVI +GY D+WS+G EM
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 45/235 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D +++ YG + +V E GS+ D +R + ++ +G
Sbjct: 69 MHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +R IHRD L A N+LL T
Sbjct: 128 MGYLESKRFIHRD---------------------------------LAARNLLLATRDLV 154
Query: 121 KLADFGVAGQLTD-----TMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM 174
K+ DFG+ L M + V PF W APE ++ + +D W G+T EM
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
Query: 175 -AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
G+ P+ ++ + + I K P+ + + + +C PE+R T
Sbjct: 212 FTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYLVMELMDA----NLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
V+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 45/235 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D +++ YG + +V E GS+ D +R + ++ +G
Sbjct: 69 MHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +R IHRD L A N+LL T
Sbjct: 128 MGYLESKRFIHRD---------------------------------LAARNLLLATRDLV 154
Query: 121 KLADFGVAGQLTDT-----MAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM 174
K+ DFG+ L M + V PF W APE ++ + +D W G+T EM
Sbjct: 155 KIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
Query: 175 -AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
G+ P+ ++ + + I K P+ + + + +C PE+R T
Sbjct: 212 FTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 265
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 141 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 189
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 190 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 222
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 45/235 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D +++ YG + +V E GS+ D +R + ++ +G
Sbjct: 65 MHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +R IHRD L A N+LL T
Sbjct: 124 MGYLESKRFIHRD---------------------------------LAARNLLLATRDLV 150
Query: 121 KLADFGVAGQLTD-----TMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM 174
K+ DFG+ L M + V PF W APE ++ + +D W G+T EM
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
Query: 175 -AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
G+ P+ ++ + + I K P+ + + + +C PE+R T
Sbjct: 208 FTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 45/235 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D +++ YG + +V E GS+ D +R + ++ +G
Sbjct: 75 MHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +R IHRD L A N+LL T
Sbjct: 134 MGYLESKRFIHRD---------------------------------LAARNLLLATRDLV 160
Query: 121 KLADFGVAGQLTD-----TMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM 174
K+ DFG+ L M + V PF W APE ++ + +D W G+T EM
Sbjct: 161 KIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217
Query: 175 -AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
G+ P+ ++ + + I K P+ + + + +C PE+R T
Sbjct: 218 FTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 271
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 45/235 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKG 60
M D +++ YG + +V E GS+ D +R + ++ +G
Sbjct: 65 MHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ YL +R IHRD L A N+LL T
Sbjct: 124 MGYLESKRFIHRD---------------------------------LAARNLLLATRDLV 150
Query: 121 KLADFGVAGQLTD-----TMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEM 174
K+ DFG+ L M + V PF W APE ++ + +D W G+T EM
Sbjct: 151 KIGDFGLMRALPQNDDHYVMQEHRKV---PFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
Query: 175 -AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
G+ P+ ++ + + I K P+ + + + +C PE+R T
Sbjct: 208 FTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 261
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 141 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 189
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 190 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 222
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 38/155 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
V+ T ++ APEVI +GY D+WS+G EM
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 50 IATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKA 109
+ L L+GL Y H ++ +HRD LK
Sbjct: 102 VKLFLFQLLRGLAYCHRQKVLHRD---------------------------------LKP 128
Query: 110 GNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV-IQEIGYDCVADMWSLG 168
N+L+N G KLADFG+A + + + T ++ P++ + Y DMW +G
Sbjct: 129 QNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVG 188
Query: 169 ITALEMAEGKPPY 181
EMA G+P +
Sbjct: 189 CIFYEMATGRPLF 201
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 1 MQQCDSPYVVKYYG-----SYFKNTDLWIVMEYCGAGSVSDIMRLRKKT--LSEDEIATI 53
+ + S Y+++ Y K +L+IV+E SD+ +L K L+E+ I TI
Sbjct: 79 LNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD----SDLKKLFKTPIFLTEEHIKTI 134
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
L + L G ++H IHRD+K + L D CS+K V + +T+ K NI+
Sbjct: 135 LYNLLLGENFIHESGIIHRDLKPANCLLNQD----CSVK--VCDFGLARTINSEKDTNIV 188
Query: 114 LNTEGHAKLA--DFGVAGQLTDTMAKRNTVIGTPFWMAPEVI--QEIGYDCVADMWSLGI 169
+ E + + + + QLT + R ++ APE+I QE Y D+WS G
Sbjct: 189 NDLEENEEPGPHNKNLKKQLTSHVVTR-------WYRAPELILLQE-NYTKSIDIWSTGC 240
Query: 170 TALEM 174
E+
Sbjct: 241 IFAEL 245
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 102 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 150
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 151 --------------------------LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 184
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
V+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 185 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 38/155 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 108 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 156
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 157 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 189
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
+ T ++ APEVI +GY D+WS+G EM
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 96 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 144
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 145 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 177
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
V+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 97 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 145
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 146 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 178
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 97 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 145
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 146 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 178
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 38/155 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D++IVME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 97 DVYIVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 145
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 146 --------------------------LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 179
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMA 175
V+ T ++ APEVI +GY D+WS+G EM
Sbjct: 180 VV-TRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 184
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 104 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 152
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 153 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 104 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 152
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A + T
Sbjct: 153 --------------------------LKPSNIVVKSDCTLKILDFGLA-RTAGTSFMMTP 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 38/158 (24%)
Query: 21 DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
D+++VME A ++ ++ + L + ++ +L L G+++LH IHRD
Sbjct: 103 DVYLVMELMDA----NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD------- 151
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
LK NI++ ++ K+ DFG+A +
Sbjct: 152 --------------------------LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 141 VIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAEGK 178
V+ T ++ APEVI +GY D+WS+G EM K
Sbjct: 186 VV-TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 78/218 (35%), Gaps = 54/218 (24%)
Query: 22 LWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGT 80
++IV EY GS+ D ++ + L + + G+ Y+ IHRD
Sbjct: 78 IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD------- 130
Query: 81 LVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT 140
L++ NIL+ K+ADFG+A + D
Sbjct: 131 --------------------------LRSANILVGNGLICKIADFGLARLIEDNEXTARQ 164
Query: 141 VIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMA-EGKPPYGDIHPMRAIFMI----- 193
P W APE + +D+WS GI E+ +G+ PY ++ + +
Sbjct: 165 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR 224
Query: 194 ---PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
P P S E + C K+PEER T
Sbjct: 225 MPCPQDCPISLHE----------LMIHCWKKDPEERPT 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 58/179 (32%)
Query: 23 WIVMEYCGAGSV-SDIMRLRKKT--LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
W+++ + G++ ++I RL+ K L+ED+I +L +GLE +H + HRD
Sbjct: 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRD------ 159
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQ--------- 130
LK NILL EG L D G Q
Sbjct: 160 ---------------------------LKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR 192
Query: 131 ----LTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV----ADMWSLGITALEMAEGKPPY 181
L D A+R T+ + APE+ + CV D+WSLG M G+ PY
Sbjct: 193 QALTLQDWAAQRCTIS----YRAPELF-SVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 94/258 (36%), Gaps = 62/258 (24%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ + + L +V E+C + L + + + L LKGL + H R
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD LK N+L+N G KLA+FG+A
Sbjct: 122 VLHRD---------------------------------LKPQNLLINRNGELKLANFGLA 148
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCVADMWSLGITALEMAE-GKP--PYGDI 184
+ + + T ++ P+V+ Y DMWS G E+A G+P P D+
Sbjct: 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208
Query: 185 -HPMRAIFMIPTKP-----PPSFREPDV-------WTPEFI-----------DFVSRCLV 220
++ IF + P P + PD T + D + L
Sbjct: 209 DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLK 268
Query: 221 KNPEERATASEMLNHEFI 238
NP +R +A E L H +
Sbjct: 269 CNPVQRISAEEALQHPYF 286
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
L A NILL K+ DFG+A + ++ + K N + WMAPE I Y +D
Sbjct: 194 LAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVK-WMAPESIFNCVYTFESD 252
Query: 164 MWSLGITALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKN 222
+WS GI E+ + G PY + P+ + F K P+ E D + C +
Sbjct: 253 VWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 311
Query: 223 PEERATASEMLNHEFIQRHDTDPSQN 248
P +R T +++ + I++ ++ + +
Sbjct: 312 PLKRPTFKQIV--QLIEKQISESTNH 335
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 95/253 (37%), Gaps = 58/253 (22%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRK---------------KTLSEDEIATI 53
+V G+ + ++ EYC G + + +R ++ + LS ++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 54 LCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNIL 113
+G+ +L + IHRD+ A N+L
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAAR---------------------------------NVL 198
Query: 114 LNTEGH-AKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGI 169
L T GH AK+ DFG+A + ++ + K N + WMAPE I + Y +D+WS GI
Sbjct: 199 L-TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGI 256
Query: 170 TALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
E+ + G PY I + + F K +P + C P R T
Sbjct: 257 LLWEIFSLGLNPYPGIL-VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 315
Query: 229 ASEMLNHEFIQRH 241
++ + F+Q
Sbjct: 316 FQQICS--FLQEQ 326
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 80/257 (31%)
Query: 22 LWIVMEYCG---AGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGS 78
+++V ++C AG +S++ L K TLSE I ++ L GL Y+H + +HRD
Sbjct: 100 IYLVFDFCEHDLAGLLSNV--LVKFTLSE--IKRVMQMLLNGLYYIHRNKILHRD----- 150
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT---DTM 135
+KA N+L+ +G KLADFG+A + ++
Sbjct: 151 ----------------------------MKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 136 AKR--NTVIGTPFWMAPE-VIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFM 192
R N V+ T ++ PE ++ E Y D+W G EM P + +
Sbjct: 183 PNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 193 IPTKPPPSFREPDVW-------------------------------TPEFIDFVSRCLVK 221
I ++ S P+VW P +D + + LV
Sbjct: 242 I-SQLCGSI-TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 299
Query: 222 NPEERATASEMLNHEFI 238
+P +R + + LNH+F
Sbjct: 300 DPAQRIDSDDALNHDFF 316
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 91/258 (35%), Gaps = 62/258 (24%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V+ + + L +V E+C + L + + + L LKGL + H R
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA 128
+HRD LK N+L+N G KLADFG+A
Sbjct: 122 VLHRD---------------------------------LKPQNLLINRNGELKLADFGLA 148
Query: 129 GQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCVADMWSLGITALEMAEGKPPY---GDI 184
+ + + T ++ P+V+ Y DMWS G E+A P D+
Sbjct: 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDV 208
Query: 185 -HPMRAIFMIPTKP-----PPSFREPDV-------WTPEFI-----------DFVSRCLV 220
++ IF + P P + PD T + D + L
Sbjct: 209 DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLK 268
Query: 221 KNPEERATASEMLNHEFI 238
NP +R +A E L H +
Sbjct: 269 CNPVQRISAEEALQHPYF 286
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 80/257 (31%)
Query: 22 LWIVMEYCG---AGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGS 78
+++V ++C AG +S++ L K TLSE I ++ L GL Y+H + +HRD
Sbjct: 100 IYLVFDFCEHDLAGLLSNV--LVKFTLSE--IKRVMQMLLNGLYYIHRNKILHRD----- 150
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT---DTM 135
+KA N+L+ +G KLADFG+A + ++
Sbjct: 151 ----------------------------MKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 136 AKR--NTVIGTPFWMAPE-VIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFM 192
R N V+ T ++ PE ++ E Y D+W G EM P + +
Sbjct: 183 PNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 193 IPTKPPPSFREPDVW-------------------------------TPEFIDFVSRCLVK 221
I ++ S P+VW P +D + + LV
Sbjct: 242 I-SQLCGSI-TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 299
Query: 222 NPEERATASEMLNHEFI 238
+P +R + + LNH+F
Sbjct: 300 DPAQRIDSDDALNHDFF 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 80/257 (31%)
Query: 22 LWIVMEYCG---AGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGS 78
+++V ++C AG +S++ L K TLSE I ++ L GL Y+H + +HRD
Sbjct: 100 IYLVFDFCEHDLAGLLSNV--LVKFTLSE--IKRVMQMLLNGLYYIHRNKILHRD----- 150
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT---DTM 135
+KA N+L+ +G KLADFG+A + ++
Sbjct: 151 ----------------------------MKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
Query: 136 AKR--NTVIGTPFWMAPE-VIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFM 192
R N V+ T ++ PE ++ E Y D+W G EM P + +
Sbjct: 183 PNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 241
Query: 193 IPTKPPPSFREPDVW-------------------------------TPEFIDFVSRCLVK 221
I ++ S P+VW P +D + + LV
Sbjct: 242 I-SQLCGSI-TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 299
Query: 222 NPEERATASEMLNHEFI 238
+P +R + + LNH+F
Sbjct: 300 DPAQRIDSDDALNHDFF 316
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
L A NILL K+ DFG+A + ++ + K N + WMAPE I Y +D
Sbjct: 189 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-WMAPESIFNCVYTFESD 247
Query: 164 MWSLGITALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKN 222
+WS GI E+ + G PY + P+ + F K P+ E D + C +
Sbjct: 248 VWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 306
Query: 223 PEERATASEMLNHEFIQRHDTDPSQN 248
P +R T +++ + I++ ++ + +
Sbjct: 307 PLKRPTFKQIV--QLIEKQISESTNH 330
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
L A NILL K+ DFG+A + ++ + K N + WMAPE I Y +D
Sbjct: 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-WMAPESIFNCVYTFESD 229
Query: 164 MWSLGITALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKN 222
+WS GI E+ + G PY + P+ + F K P+ E D + C +
Sbjct: 230 VWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 288
Query: 223 PEERATASEMLNHEFIQRHDTDPSQN 248
P +R T +++ + I++ ++ + +
Sbjct: 289 PLKRPTFKQIV--QLIEKQISESTNH 312
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
L A NILL K+ DFG+A + ++ + K N + WMAPE I Y +D
Sbjct: 194 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-WMAPESIFNCVYTFESD 252
Query: 164 MWSLGITALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKN 222
+WS GI E+ + G PY + P+ + F K P+ E D + C +
Sbjct: 253 VWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 311
Query: 223 PEERATASEMLNHEFIQRHDTDPSQN 248
P +R T +++ + I++ ++ + +
Sbjct: 312 PLKRPTFKQIV--QLIEKQISESTNH 335
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 101/257 (39%), Gaps = 80/257 (31%)
Query: 22 LWIVMEYCG---AGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGS 78
+++V ++C AG +S++ L K TLSE I ++ L GL Y+H + +HRD
Sbjct: 99 IYLVFDFCEHDLAGLLSNV--LVKFTLSE--IKRVMQMLLNGLYYIHRNKILHRD----- 149
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLT---DTM 135
+KA N+L+ +G KLADFG+A + ++
Sbjct: 150 ----------------------------MKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181
Query: 136 AKR--NTVIGTPFWMAPE-VIQEIGYDCVADMWSLGITALEMAEGKPPYGDIHPMRAIFM 192
R N V+ T ++ PE ++ E Y D+W G EM P + +
Sbjct: 182 PNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL 240
Query: 193 IPTKPPPSFREPDVW-------------------------------TPEFIDFVSRCLVK 221
I ++ S P+VW P +D + + LV
Sbjct: 241 I-SQLCGSI-TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 298
Query: 222 NPEERATASEMLNHEFI 238
+P +R + + LNH+F
Sbjct: 299 DPAQRIDSDDALNHDFF 315
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I++E+ G++ D +R ++ +S + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 123 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 149
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 210 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I++E+ G++ D +R ++ +S + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 123 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 149
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 210 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 70/191 (36%), Gaps = 47/191 (24%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLR---------------KKTLSEDEIA 51
P VV G K+ L ++ YC G + + + +R K L +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 52 TILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
++ G+EYL +H+D+ A LVYD+L+ I + ++Y + GN
Sbjct: 149 HLVAQIAAGMEYLSSHHVVHKDL-ATRNVLVYDKLN-VKISDLGLFREVYAADYYKLLGN 206
Query: 112 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITA 171
LL WMAPE I + +D+WS G+
Sbjct: 207 SLLPIR-----------------------------WMAPEAIMYGKFSIDSDIWSYGVVL 237
Query: 172 LEM-AEGKPPY 181
E+ + G PY
Sbjct: 238 WEVFSYGLQPY 248
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 99/262 (37%), Gaps = 70/262 (26%)
Query: 19 NTDLWIVMEYCGAGSVSDIMRLRKKT-LSEDEIATILCDTLKGLEYLHLRRK--IHRDIK 75
+ ++ E C V + ++ + LS D + I T + ++++H ++ IHRD
Sbjct: 106 QAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRD-- 163
Query: 76 AGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDT- 134
LK N+LL+ +G KL DFG A ++
Sbjct: 164 -------------------------------LKVENLLLSNQGTIKLCDFGSATTISHYP 192
Query: 135 ----MAKRNTVI-------GTPFWMAPEVIQ-----EIGYDCVADMWSLGITALEMAEGK 178
A+R ++ TP + PE+I IG D+W+LG + +
Sbjct: 193 DYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEK--QDIWALGCILYLLCFRQ 250
Query: 179 PPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN--HE 236
P+ D +R + + PP D F + L NPEER + +E+++ E
Sbjct: 251 HPFEDGAKLRIVNGKYSIPP-----HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE 305
Query: 237 FIQRHDTDP--------SQNGG 250
+ +P QNGG
Sbjct: 306 IAAARNVNPKSPITELLEQNGG 327
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 42/183 (22%)
Query: 3 QCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTLKG 60
+C +V+ G DL +V Y GS+ D + T LS I G
Sbjct: 77 KCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANG 136
Query: 61 LEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA 120
+ +LH IHRDIK+ NILL+ A
Sbjct: 137 INFLHENHHIHRDIKSA---------------------------------NILLDEAFTA 163
Query: 121 KLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQ-EIGYDCVADMWSLGITALEMAE 176
K++DFG+A + ++ A+ + ++GT + APE ++ EI +D++S G+ LE+
Sbjct: 164 KISDFGLA-RASEKFAQXVXXSRIVGTTAYXAPEALRGEITPK--SDIYSFGVVLLEIIT 220
Query: 177 GKP 179
G P
Sbjct: 221 GLP 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 163
L A NILL K+ DFG+A + ++ + K N + WMAPE I Y +D
Sbjct: 187 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK-WMAPESIFNCVYTFESD 245
Query: 164 MWSLGITALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKN 222
+WS GI E+ + G PY + P+ + F K P+ E D + C +
Sbjct: 246 VWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 304
Query: 223 PEERATASEMLNHEFIQRHDTDPSQN 248
P +R T +++ + I++ ++ + +
Sbjct: 305 PLKRPTFKQIV--QLIEKQISESTNH 328
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 70/191 (36%), Gaps = 47/191 (24%)
Query: 7 PYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLR---------------KKTLSEDEIA 51
P VV G K+ L ++ YC G + + + +R K L +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 52 TILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
++ G+EYL +H+D+ A LVYD+L+ I + ++Y + GN
Sbjct: 132 HLVAQIAAGMEYLSSHHVVHKDL-ATRNVLVYDKLN-VKISDLGLFREVYAADYYKLLGN 189
Query: 112 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITA 171
LL WMAPE I + +D+WS G+
Sbjct: 190 SLLPIR-----------------------------WMAPEAIMYGKFSIDSDIWSYGVVL 220
Query: 172 LEM-AEGKPPY 181
E+ + G PY
Sbjct: 221 WEVFSYGLQPY 231
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 44/170 (25%)
Query: 24 IVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
++ME+C GS+ ++ L E E +L D + G+ +L +HR+IK G
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPG---- 141
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA--KLADFGVAGQLTDTMAKRN 139
N++ ++ +G + KL DFG A +L D +
Sbjct: 142 ------------NIMR---------------VIGEDGQSVYKLTDFGAARELEDD-EQFV 173
Query: 140 TVIGTPFWMAPEVIQ--------EIGYDCVADMWSLGITALEMAEGKPPY 181
++ GT ++ P++ + + Y D+WS+G+T A G P+
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I++E+ G++ D +R ++ ++ + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 124 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 150
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 151 VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 210
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 211 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 76/198 (38%), Gaps = 66/198 (33%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV---------------------IGTP 145
+K NILLN E H K+ADFG++ + N + + T
Sbjct: 135 MKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATR 194
Query: 146 FWMAPEV-IQEIGYDCVADMWSLGITALEMAEGKPPY---------------------GD 183
++ APE+ + Y DMWSLG E+ GKP + D
Sbjct: 195 WYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNED 254
Query: 184 IHPMRAIF---MIPT-KPPPSFREP---DVWTP----------------EFIDFVSRCLV 220
+ +++ F MI + K R+ D++T E +D + + L
Sbjct: 255 VESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314
Query: 221 KNPEERATASEMLNHEFI 238
NP +R +A++ L H F+
Sbjct: 315 FNPNKRISANDALKHPFV 332
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ +S + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 123 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 149
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 210 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 33/168 (19%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADM 164
+K N+L+N +G KL DFG A +L+ + I + ++ APE+I Y D+
Sbjct: 157 IKPHNVLVNEADGTLKLCDFGSAKKLSPS-EPNVAYICSRYYRAPELIFGNQHYTTAVDI 215
Query: 165 WSLGITALEMAEGKPPY------GDIHPMRAIFMIPT-----KPPPSFREPDVWTPEFI- 212
WS+G EM G+P + G +H + + P+ K PS + D++ + I
Sbjct: 216 WSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIP 275
Query: 213 -----------------DFVSRCLVKNPEERATASEMLNHE-FIQRHD 242
D +S L PEER E L H F + HD
Sbjct: 276 WSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 52/247 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT---------LSEDEIATILCDTLK 59
+V G+ + ++ EYC G + + +R + + L ++ +
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ +L + IHRD+ A N+LL T GH
Sbjct: 164 GMAFLASKNCIHRDVAAR---------------------------------NVLL-TNGH 189
Query: 120 -AKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM- 174
AK+ DFG+A + ++ + K N + WMAPE I + Y +D+WS GI E+
Sbjct: 190 VAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIF 248
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+ G PY I + + F K +P + C P R T ++ +
Sbjct: 249 SLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 307
Query: 235 HEFIQRH 241
F+Q
Sbjct: 308 --FLQEQ 312
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ +S + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 123 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 149
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 210 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 52/247 (21%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKT---------LSEDEIATILCDTLK 59
+V G+ + ++ EYC G + + +R + + L ++ +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+ +L + IHRD+ A N+LL T GH
Sbjct: 172 GMAFLASKNCIHRDVAAR---------------------------------NVLL-TNGH 197
Query: 120 -AKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM- 174
AK+ DFG+A + ++ + K N + WMAPE I + Y +D+WS GI E+
Sbjct: 198 VAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIF 256
Query: 175 AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 234
+ G PY I + + F K +P + C P R T ++ +
Sbjct: 257 SLGLNPYPGI-LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 315
Query: 235 HEFIQRH 241
F+Q
Sbjct: 316 --FLQEQ 320
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ +S + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 128 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 154
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 155 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 215 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I++E+ G++ D +R ++ ++ + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 128 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 154
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 155 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 215 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 88/236 (37%), Gaps = 45/236 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDL-WIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLK 59
M+ + P V+ G L +++ Y G + +R ++ + ++ + +
Sbjct: 76 MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVAR 135
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
G+EYL ++ +HRD L A N +L+
Sbjct: 136 GMEYLAEQKFVHRD---------------------------------LAARNCMLDESFT 162
Query: 120 AKLADFGVAGQLTD-----TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALE- 173
K+ADFG+A + D R+ + W A E +Q + +D+WS G+ E
Sbjct: 163 VKVADFGLARDILDREYYSVQQHRHARLPVK-WTALESLQTYRFTTKSDVWSFGVLLWEL 221
Query: 174 MAEGKPPYGDIHPMRAI-FMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
+ G PPY I P F+ + P +P+ + +C +P R T
Sbjct: 222 LTRGAPPYRHIDPFDLTHFLAQGRRLP---QPEYCPDSLYQVMQQCWEADPAVRPT 274
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 42/181 (23%)
Query: 9 VVKYYGSYFKNT----DLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
++++ G+ + T DLW++ + GS+SD L+ +S +E+ I +GL YL
Sbjct: 80 ILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDF--LKANVVSWNELCHIAETMARGLAYL 137
Query: 65 HLRRKIHRDI---KAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
H DI K G + R +K+ N+LL A
Sbjct: 138 H------EDIPGLKDGHKPAISHR--------------------DIKSKNVLLKNNLTAC 171
Query: 122 LADFGVAGQLTDTMAKRNT--VIGTPFWMAPEVIQ-EIGYDCVA----DMWSLGITALEM 174
+ADFG+A + + +T +GT +MAPEV++ I + A DM+++G+ E+
Sbjct: 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
Query: 175 A 175
A
Sbjct: 232 A 232
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 75/201 (37%), Gaps = 61/201 (30%)
Query: 1 MQQCDSPYVVKYYGSYF-KNTD-----------LWIVMEYCGAGSVSDIMRLRKKTLSED 48
+ + + P +V+Y+ ++ KNT L+I M+ C ++ D M R T+ E
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC-TIEER 115
Query: 49 EIAT---ILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLF 105
E + I + +E+LH + +HRD
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSKGLMHRD-------------------------------- 143
Query: 106 RLKAGNILLNTEGHAKLADFGVAGQLTD------------TMAKRNTVIGTPFWMAPEVI 153
LK NI + K+ DFG+ + A+ +GT +M+PE I
Sbjct: 144 -LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202
Query: 154 QEIGYDCVADMWSLGITALEM 174
Y D++SLG+ E+
Sbjct: 203 HGNSYSHKVDIFSLGLILFEL 223
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 38/246 (15%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G +IV EY G++ D +R ++ ++ + +
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 142 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHV 168
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 169 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYG 228
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 237
PY I + ++ + +P+ P+ + + C +P +R + +E
Sbjct: 229 MSPYPGIDLSQVYDLL--EKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
Query: 238 IQRHDT 243
HD+
Sbjct: 287 TMFHDS 292
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 44/170 (25%)
Query: 24 IVMEYCGAGSVSDIMRLRKKT--LSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
++ME+C GS+ ++ L E E +L D + G+ +L +HR+IK G
Sbjct: 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPG---- 141
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHA--KLADFGVAGQLTDTMAKRN 139
N++ ++ +G + KL DFG A +L D +
Sbjct: 142 ------------NIMR---------------VIGEDGQSVYKLTDFGAARELEDD-EQFV 173
Query: 140 TVIGTPFWMAPEVIQ--------EIGYDCVADMWSLGITALEMAEGKPPY 181
+ GT ++ P++ + + Y D+WS+G+T A G P+
Sbjct: 174 XLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 128 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 154
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 155 VKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 215 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 21/238 (8%)
Query: 9 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRR 68
+V G+ + ++ EYC G + + +R + + + +A +GL+ R
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAP--GQDPEGLDKEDGRP 154
Query: 69 KIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH-AKLADFGV 127
RD+ S + S C I++ + A N+LL T GH AK+ DFG+
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNC------IHRDV---AARNVLL-TNGHVAKIGDFGL 204
Query: 128 AGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEM-AEGKPPYGD 183
A + ++ + K N + WMAPE I + Y +D+WS GI E+ + G PY
Sbjct: 205 ARDIMNDSNYIVKGNARLPVK-WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
Query: 184 IHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQRH 241
I + + F K +P + C P R T ++ + F+Q
Sbjct: 264 IL-VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS--FLQEQ 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 164
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 165 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 267
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 268 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 164
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 165 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 267
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 268 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 164
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 165 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 267
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 268 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 164
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 165 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 267
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 268 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 123 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 149
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 210 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 164
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 165 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 267
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 268 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 122 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 165
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 166 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 208
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 209 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 268
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 269 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 5 DSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYL 64
D+ VKY + KN + I M Y S DI+ +LS E+ + + K L+ +
Sbjct: 80 DNVMGVKY--CFRKNDHVVIAMPYLEHESFLDIL----NSLSFQEVREYMLNLFKALKRI 133
Query: 65 HLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLAD 124
H +HRD+K S L RL ++ + + T L + +E +
Sbjct: 134 HQFGIVHRDVKP-SNFLYNRRLKKYALVDFGLAQGTHDTKIELLK---FVQSEAQQERCS 189
Query: 125 FGVAGQLTDTMAKRNTV---IGTPFWMAPEVIQEIGYDCVA-DMWSLGITALEMAEGKPP 180
+ + +++R V GTP + APEV+ + A DMWS G+ L + G+ P
Sbjct: 190 ---QNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
Query: 181 Y 181
+
Sbjct: 247 F 247
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 123 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 166
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 167 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 209
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 210 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 269
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 270 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 136 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 162
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 163 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 222
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 223 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 122 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 165
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 166 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 208
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 209 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 268
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 269 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 123 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 149
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 150 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 209
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 210 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 142 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 185
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 186 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 228
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 229 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALV 288
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 289 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 128 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 154
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 155 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 215 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 69/233 (29%)
Query: 44 TLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKT 103
TL++ +I + + LK L+Y H + +HRD+K NV+ + +
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPH----------------NVMIDHELRK 164
Query: 104 LFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVA 162
L +L D+G+A + + N + + ++ PE++ ++ YD
Sbjct: 165 L----------------RLIDWGLA-EFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 163 DMWSLGITALEMAEGKPP--YG-DIHPMRA-------------------IFMIPT----- 195
DMWSLG M K P YG D H I + P
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALV 267
Query: 196 -----KPPPSFREPD---VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQR 240
KP F D + +PE IDF+ + L + +ER TA E + H + Q+
Sbjct: 268 GRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 127 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 153
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 154 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 213
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 214 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 125 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 151
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 152 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 212 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 125 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 151
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 152 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 212 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 128 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 154
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 155 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 214
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 215 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ +S + +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHR+ L A N L+
Sbjct: 330 AMEYLEKKNFIHRN---------------------------------LAARNCLVGENHL 356
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 357 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 416
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 417 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 125 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 151
Query: 120 AKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T DT W APE + + +D+W+ G+ E+A G
Sbjct: 152 VKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 211
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 212 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 2 QQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGL 61
+Q VV + G+ L I+ C ++ ++R K L ++ I + +KG+
Sbjct: 84 RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGM 143
Query: 62 EYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAK 121
YLH + +H+D+K S + YD G +++ G
Sbjct: 144 GYLHAKGILHKDLK--SKNVFYDN------------------------GKVVITDFGLFS 177
Query: 122 LADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV---------ADMWSLGITAL 172
++ AG+ D + +N G +APE+I+++ D +D+++LG
Sbjct: 178 ISGVLQAGRREDKLRIQN---GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWY 234
Query: 173 EMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
E+ + P+ I+ + T P+ + + E D + C EER T +++
Sbjct: 235 ELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGM-GKEISDILLFCWAFEQEERPTFTKL 293
Query: 233 LN 234
++
Sbjct: 294 MD 295
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHRD L A N L+
Sbjct: 124 AMEYLEKKNFIHRD---------------------------------LAARNCLVGENHL 150
Query: 120 AKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T DT W APE + + +D+W+ G+ E+A G
Sbjct: 151 VKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 210
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 211 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 19/150 (12%)
Query: 107 LKAGNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV-ADM 164
+K NIL++ G AKL DFG L D GT + PE I Y + A +
Sbjct: 165 IKDENILIDLRRGCAKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATV 222
Query: 165 WSLGITALEMAEGKPPYG-DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D + A P +P+ + RCL P
Sbjct: 223 WSLGILLYDMVCGDIPFERDQEILEAELHFPAH----------VSPDCCALIRRCLAPKP 272
Query: 224 EERATASEMLNHEFIQRHDTD----PSQNG 249
R + E+L ++Q D PS+ G
Sbjct: 273 SSRPSLEEILLDPWMQTPAEDVPLNPSKGG 302
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 91/235 (38%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHR+ L A N L+
Sbjct: 369 AMEYLEKKNFIHRN---------------------------------LAARNCLVGENHL 395
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 396 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 455
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K P+ + + + C NP +R + +E+
Sbjct: 456 MSPYPGID-LSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 38/235 (16%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMR-LRKKTLSEDEIATILCDTLK 59
M++ P +V+ G + +I+ E+ G++ D +R ++ ++ + +
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 60 GLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGH 119
+EYL + IHR+ L A N L+
Sbjct: 327 AMEYLEKKNFIHRN---------------------------------LAARNCLVGENHL 353
Query: 120 AKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSLGITALEMAE-G 177
K+ADFG++ +T + P W APE + + +D+W+ G+ E+A G
Sbjct: 354 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG 413
Query: 178 KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 232
PY I + ++ + K R P+ + + + C NP +R + +E+
Sbjct: 414 MSPYPGID-LSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 87/244 (35%), Gaps = 55/244 (22%)
Query: 8 YVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLR---------------KKTLSEDEIAT 52
++VK+YG L +V EY G ++ +R K L ++
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 53 ILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNI 112
I G+ YL + +HRD+ + C + N++
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRN----------CLVGANLLV--------------- 172
Query: 113 LLNTEGHAKLADFGVAGQLTDTMAKR---NTVIGTPFWMAPEVIQEIGYDCVADMWSLGI 169
K+ DFG++ + T R +T++ WM PE I + +D+WS G+
Sbjct: 173 --------KIGDFGMSRDVYSTDYYRVGGHTMLPIR-WMPPESIMYRKFTTESDVWSFGV 223
Query: 170 TALEM-AEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
E+ GK P+ + I I P V E D + C + P++R
Sbjct: 224 ILWEIFTYGKQPWFQLSNTEVIECITQG--RVLERPRVCPKEVYDVMLGCWQREPQQRLN 281
Query: 229 ASEM 232
E+
Sbjct: 282 IKEI 285
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 107 LKAGNILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NILL +G + K+ DFG + + T I + F+ APEVI Y DM
Sbjct: 226 LKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDM 282
Query: 165 WSLGITALEMAEGKP 179
WSLG E+ G P
Sbjct: 283 WSLGCILAELLTGYP 297
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 107 LKAGNILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NILL +G + K+ DFG + + T I + F+ APEVI Y DM
Sbjct: 226 LKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRFYRAPEVILGARYGMPIDM 282
Query: 165 WSLGITALEMAEGKP 179
WSLG E+ G P
Sbjct: 283 WSLGCILAELLTGYP 297
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 93/240 (38%), Gaps = 70/240 (29%)
Query: 35 SDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCN 94
+D +LR+ TL++ +I + + LK L+Y H +HRD+K N
Sbjct: 119 TDFKQLRQ-TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------N 161
Query: 95 VITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ 154
V+ + ++ L + G LA+F GQ + N + + ++ PE++
Sbjct: 162 VMIDHEHRKLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLV 204
Query: 155 EIG-YDCVADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP----------- 197
+ YD DMWSLG M K P+ H +R ++ T+
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 198 -PPSFRE------------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
P F + + +PE +DF+ + L + + R TA E + H +
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 139 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 196
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 197 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 246
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 247 SDRPTFEEIQNHPWMQ 262
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 136 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 193
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 194 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 243
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 244 SDRPTFEEIQNHPWMQ 259
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 140 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 197
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 198 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 247
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 248 SDRPTFEEIQNHPWMQ 263
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 140 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 197
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 198 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 247
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 248 SDRPTFEEIQNHPWMQ 263
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 141 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 198
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 199 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 248
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 249 SDRPTFEEIQNHPWMQ 264
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 97/273 (35%), Gaps = 70/273 (25%)
Query: 1 MQQCDSPYVVKYYGSYFKNTD------LWIVMEYCGAG--SVSDIMRLRKKTLSEDEIAT 52
M+ P VV ++ N D L +V+EY S K+T+ I
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL 145
Query: 53 ILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNI 112
+ L+ L Y+H HRDIK N+
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQ---------------------------------NL 172
Query: 113 LLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWSLGIT 170
LL+ G KL DFG A L + I + ++ APE+I Y D+WS G
Sbjct: 173 LLDPPSGVLKLIDFGSAKILI-AGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCV 231
Query: 171 ALEMAEGKPPY---GDIHPMRAIFMIPTKPP--------PSFRE-------PDVWT---- 208
E+ +G+P + I + I + P P++ E P ++
Sbjct: 232 MAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFR 291
Query: 209 ----PEFIDFVSRCLVKNPEERATASEMLNHEF 237
P+ ID +SR L P R TA E L H F
Sbjct: 292 PRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 141 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 198
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 199 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 248
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 249 SDRPTFEEIQNHPWMQ 264
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 155 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 212
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 213 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 262
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 263 SDRPTFEEIQNHPWMQ 278
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 183 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 240
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 241 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 290
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 291 SDRPTFEEIQNHPWMQ 306
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 136 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 193
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 194 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SXECQHLIRWCLALRP 243
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 244 SDRPTFEEIQNHPWMQ 259
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 141 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 198
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 199 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 248
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 249 SDRPTFEEIQNHPWMQ 264
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 168 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 225
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 226 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 275
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 276 SDRPTFEEIQNHPWMQ 291
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 156 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 213
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 214 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 263
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 264 SDRPTFEEIQNHPWMQ 279
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 183 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 240
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 241 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 290
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 291 SDRPTFEEIQNHPWMQ 306
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 88/248 (35%), Gaps = 65/248 (26%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTL 81
L++V E ++ ++ ++ +S I + L GL LH +HRD
Sbjct: 109 LYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRD-------- 159
Query: 82 VYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 141
L GNILL + DF +A + T A +
Sbjct: 160 -------------------------LHPGNILLADNNDITICDFNLAREDTAD-ANKTHY 193
Query: 142 IGTPFWMAPEVIQEI-GYDCVADMWSLGITALEMA------EGKPPYGDIHPMRAIFMIP 194
+ ++ APE++ + G+ + DMWS G EM G Y ++ + + P
Sbjct: 194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253
Query: 195 TK------PPPSFRE----------PDVWT-------PEFIDFVSRCLVKNPEERATASE 231
PS R+ WT P +D +++ L NP+ R + +
Sbjct: 254 KIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ 313
Query: 232 MLNHEFIQ 239
L H + +
Sbjct: 314 ALRHPYFE 321
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 175 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 232
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 233 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SSECQHLIRWCLALRP 282
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 283 SDRPTFEEIQNHPWMQ 298
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 38/176 (21%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
T LW+V +Y GS+ D L + T++ + + + T GL +LH+ +I G
Sbjct: 74 TQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHM------EIVGTQG 125
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA---GQLTDTM- 135
D LK+ NIL+ G +AD G+A TDT+
Sbjct: 126 KPAIAHRD-------------------LKSKNILVKKNGTCCIADLGLAVRHDSATDTID 166
Query: 136 AKRNTVIGTPFWMAPEVIQEI----GYDCV--ADMWSLGITALEMAEGKPPYGDIH 185
N +GT +MAPEV+ + ++ AD++++G+ E+A + G IH
Sbjct: 167 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIH 221
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 156 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 213
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 214 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SXECQHLIRWCLALRP 263
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 264 SDRPTFEEIQNHPWMQ 279
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 155 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 212
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 213 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SXECQHLIRWCLALRP 262
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 263 SDRPTFEEIQNHPWMQ 278
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 38/176 (21%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
T LW+V +Y GS+ D L + T++ + + + T GL +LH+ +I G
Sbjct: 75 TQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHM------EIVGTQG 126
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA---GQLTDTM- 135
D LK+ NIL+ G +AD G+A TDT+
Sbjct: 127 KPAIAHRD-------------------LKSKNILVKKNGTCCIADLGLAVRHDSATDTID 167
Query: 136 AKRNTVIGTPFWMAPEVIQEI----GYDCV--ADMWSLGITALEMAEGKPPYGDIH 185
N +GT +MAPEV+ + ++ AD++++G+ E+A + G IH
Sbjct: 168 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIH 222
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 31/163 (19%)
Query: 107 LKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVADMW 165
L GNILL + DF +A + T A + + ++ APE++ + G+ + DMW
Sbjct: 160 LHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMW 218
Query: 166 SLGITALEMA------EGKPPYGDIHPMRAIFMIPTK------PPPSFRE---------- 203
S G EM G Y ++ + + P PS R+
Sbjct: 219 SAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP 278
Query: 204 PDVWT-------PEFIDFVSRCLVKNPEERATASEMLNHEFIQ 239
WT P +D +++ L NP+ R + + L H + +
Sbjct: 279 ARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFE 321
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 163 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 220
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 221 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SXECQHLIRWCLALRP 270
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 271 SDRPTFEEIQNHPWMQ 286
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 38/176 (21%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
T LW+V +Y GS+ D L + T++ + + + T GL +LH+ +I G
Sbjct: 80 TQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHM------EIVGTQG 131
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA---GQLTDTM- 135
D LK+ NIL+ G +AD G+A TDT+
Sbjct: 132 KPAIAHRD-------------------LKSKNILVKKNGTCCIADLGLAVRHDSATDTID 172
Query: 136 AKRNTVIGTPFWMAPEVIQEI----GYDCV--ADMWSLGITALEMAEGKPPYGDIH 185
N +GT +MAPEV+ + ++ AD++++G+ E+A + G IH
Sbjct: 173 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIH 227
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 38/176 (21%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
T LW+V +Y GS+ D L + T++ + + + T GL +LH+ +I G
Sbjct: 77 TQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHM------EIVGTQG 128
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA---GQLTDTM- 135
D LK+ NIL+ G +AD G+A TDT+
Sbjct: 129 KPAIAHRD-------------------LKSKNILVKKNGTCCIADLGLAVRHDSATDTID 169
Query: 136 AKRNTVIGTPFWMAPEVIQEI----GYDCV--ADMWSLGITALEMAEGKPPYGDIH 185
N +GT +MAPEV+ + ++ AD++++G+ E+A + G IH
Sbjct: 170 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIH 224
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVLIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 38/176 (21%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
T LW+V +Y GS+ D L + T++ + + + T GL +LH+ +I G
Sbjct: 113 TQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHM------EIVGTQG 164
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA---GQLTDTM- 135
D LK+ NIL+ G +AD G+A TDT+
Sbjct: 165 KPAIAHRD-------------------LKSKNILVKKNGTCCIADLGLAVRHDSATDTID 205
Query: 136 AKRNTVIGTPFWMAPEVIQEI----GYDCV--ADMWSLGITALEMAEGKPPYGDIH 185
N +GT +MAPEV+ + ++ AD++++G+ E+A + G IH
Sbjct: 206 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIH 260
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 188 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 245
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R FR+ + E + CL P
Sbjct: 246 WSLGILLYDMVCGDIPFEHDEEIIRGQVF--------FRQRV--SXECQHLIRWCLALRP 295
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 296 SDRPTFEEIQNHPWMQ 311
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 183 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 240
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R FR+ + E + CL P
Sbjct: 241 WSLGILLYDMVCGDIPFEHDEEIIRGQVF--------FRQRV--SXECQHLIRWCLALRP 290
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 291 SDRPTFEEIQNHPWMQ 306
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 156 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 213
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNP 223
WSLGI +M G P+ D +R + + E + CL P
Sbjct: 214 WSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV----------SXECQHLIRWCLALRP 263
Query: 224 EERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 264 XDRPTFEEIQNHPWMQ 279
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 168
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 169 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 211
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 271
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 272 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 107 LKAGNILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 164
LK NILL +G + K+ DFG + + I + F+ APEVI Y DM
Sbjct: 226 LKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYXXIQSRFYRAPEVILGARYGMPIDM 282
Query: 165 WSLGITALEMAEGKP 179
WSLG E+ G P
Sbjct: 283 WSLGCILAELLTGYP 297
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 38/176 (21%)
Query: 20 TDLWIVMEYCGAGSVSDIMRLRKKTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSG 79
T LW+V +Y GS+ D L + T++ + + + T GL +LH+ +I G
Sbjct: 100 TQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHM------EIVGTQG 151
Query: 80 TLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVA---GQLTDTM- 135
D LK+ NIL+ G +AD G+A TDT+
Sbjct: 152 KPAIAHRD-------------------LKSKNILVKKNGTCCIADLGLAVRHDSATDTID 192
Query: 136 AKRNTVIGTPFWMAPEVIQEI----GYDCV--ADMWSLGITALEMAEGKPPYGDIH 185
N +GT +MAPEV+ + ++ AD++++G+ E+A + G IH
Sbjct: 193 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIH 247
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 125 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 168
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 169 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 211
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 271
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 272 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 124 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 167
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 168 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 210
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 211 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 270
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 271 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 131 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKP----------------HNVMIDHEHR 174
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 175 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 217
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 218 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 277
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 278 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 63/169 (37%), Gaps = 51/169 (30%)
Query: 22 LWIVMEYCGAGSVSDIMRLRKKTLSEDEIAT---ILCDTLKGLEYLHLRRKIHRDIKAGS 78
L+I M+ C ++ D M R+ +L + E I + +E+LH + +HRD
Sbjct: 136 LYIQMQLCRKENLKDWMN-RRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRD----- 189
Query: 79 GTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKR 138
LK NI + K+ DFG+ + D +
Sbjct: 190 ----------------------------LKPSNIFFTMDDVVKVGDFGLVTAM-DQDEEE 220
Query: 139 NTV-------------IGTPFWMAPEVIQEIGYDCVADMWSLGITALEM 174
TV +GT +M+PE I Y D++SLG+ E+
Sbjct: 221 QTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/246 (17%), Positives = 95/246 (38%), Gaps = 47/246 (19%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIMRLRKKTLSED---------EIA 51
M++ + +VV+ G + ++ME G + +R + + + ++
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 52 TILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKAGN 111
+ + G+ YL+ + +HRD L A N
Sbjct: 127 QMAGEIADGMAYLNANKFVHRD---------------------------------LAARN 153
Query: 112 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWSLGI 169
++ + K+ DFG+ + +T R G P WM+PE +++ + +D+WS G+
Sbjct: 154 CMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 213
Query: 170 TALEMAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 228
E+A + PY + + + + +PD ++ + C NP+ R +
Sbjct: 214 VLWEIATLAEQPYQGLSNEQVLRFV--MEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPS 271
Query: 229 ASEMLN 234
E+++
Sbjct: 272 FLEIIS 277
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 91/243 (37%), Gaps = 51/243 (20%)
Query: 1 MQQCDSPYVVKYYGSYFKNTDL------WIVMEYCGAGSVSDIMRLRKK-----TLSEDE 49
M++ D P+V K G ++ +++ + G + + + L
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 50 IATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYKTLFRLKA 109
+ + D G+EYL R IHRD L A
Sbjct: 139 LVRFMVDIACGMEYLSSRNFIHRD---------------------------------LAA 165
Query: 110 GNILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSL 167
N +L + +ADFG++ ++ + ++ P W+A E + + Y +D+W+
Sbjct: 166 RNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAF 225
Query: 168 GITALE-MAEGKPPYGDIHPMRAI-FMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEE 225
G+T E M G+ PY I ++I ++P E D + +C +P++
Sbjct: 226 GVTMWEIMTRGQTPYAGIENAEIYNYLIGGN---RLKQPPECMEEVYDLMYQCWSADPKQ 282
Query: 226 RAT 228
R +
Sbjct: 283 RPS 285
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 69/232 (29%)
Query: 43 KTLSEDEIATILCDTLKGLEYLHLRRKIHRDIKAGSGTLVYDRLDYCSIKCNVITNQIYK 102
+TL++ +I + + LK L+Y H +HRD+K NV+ + ++
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH----------------NVMIDHEHR 169
Query: 103 TLFRLKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCV 161
L + G LA+F GQ + N + + ++ PE++ + YD
Sbjct: 170 KLRLIDWG-----------LAEFYHPGQ------EYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 162 ADMWSLGITALEMAEGKPPYGDIHP-----MRAIFMIPTKP------------PPSFRE- 203
DMWSLG M K P+ H +R ++ T+ P F +
Sbjct: 213 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 204 -----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 238
+ +PE +DF+ + L + + R TA E + H +
Sbjct: 273 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 107 LKAGNILLNTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADM 164
+K N+LL+ + KL DFG A QL + I + ++ APE+I Y D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 206
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPS-------------FREPDV---- 206
WS G E+ G+P + GD + + +I P+ F+ P +
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266
Query: 207 WT--------PEFIDFVSRCLVKNPEERATASEMLNHEFI 238
WT PE I SR L P R T E H F
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 107 LKAGNILLNTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADM 164
+K N+LL+ + KL DFG A QL + I + ++ APE+I Y D+
Sbjct: 152 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 210
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPS-------------FREPDV---- 206
WS G E+ G+P + GD + + +I P+ F+ P +
Sbjct: 211 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 270
Query: 207 WT--------PEFIDFVSRCLVKNPEERATASEMLNHEFI 238
WT PE I SR L P R T E H F
Sbjct: 271 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 107 LKAGNILLNTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADM 164
+K N+LL+ + KL DFG A QL + I + ++ APE+I Y D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 206
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPS-------------FREPDV---- 206
WS G E+ G+P + GD + + +I P+ F+ P +
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266
Query: 207 WT--------PEFIDFVSRCLVKNPEERATASEMLNHEFI 238
WT PE I SR L P R T E H F
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 107 LKAGNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADM 164
+K NIL++ G KL DFG L DT+ GT + PE I+ Y A +
Sbjct: 136 IKDENILIDLNRGELKLIDFGSGALLKDTVY--TDFDGTRVYSPPEWIRYHRYHGRSAAV 193
Query: 165 WSLGITALEMAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPE 224
WSLGI +M G P+ + + FR+ + E + CL P
Sbjct: 194 WSLGILLYDMVCGDIPFEHDEEIIGGQVF-------FRQRV--SSECQHLIRWCLALRPS 244
Query: 225 ERATASEMLNHEFIQ 239
+R T E+ NH ++Q
Sbjct: 245 DRPTFEEIQNHPWMQ 259
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 107 LKAGNILLNTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADM 164
+K N+LL+ + KL DFG A QL + I + ++ APE+I Y D+
Sbjct: 149 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 207
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPS-------------FREPDV---- 206
WS G E+ G+P + GD + + +I P+ F+ P +
Sbjct: 208 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 267
Query: 207 WT--------PEFIDFVSRCLVKNPEERATASEMLNHEFI 238
WT PE I SR L P R T E H F
Sbjct: 268 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 107 LKAGNILLNTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADM 164
+K N+LL+ + KL DFG A QL + I + ++ APE+I Y D+
Sbjct: 156 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 214
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPS-------------FREPDV---- 206
WS G E+ G+P + GD + + +I P+ F+ P +
Sbjct: 215 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 274
Query: 207 WT--------PEFIDFVSRCLVKNPEERATASEMLNHEFI 238
WT PE I SR L P R T E H F
Sbjct: 275 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 107 LKAGNILLNTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADM 164
+K N+LL+ + KL DFG A QL + I + ++ APE+I Y D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 206
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPS-------------FREPDV---- 206
WS G E+ G+P + GD + + +I P+ F+ P +
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266
Query: 207 WT--------PEFIDFVSRCLVKNPEERATASEMLNHEFI 238
WT PE I SR L P R T E H F
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 64/160 (40%), Gaps = 29/160 (18%)
Query: 107 LKAGNILLNTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADM 164
+K N+LL+ + KL DFG A QL + I + ++ APE+I Y D+
Sbjct: 167 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 225
Query: 165 WSLGITALEMAEGKPPY-GDIHPMRAIFMIPTKPPPS-------------FREPDV---- 206
WS G E+ G+P + GD + + +I P+ F+ P +
Sbjct: 226 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 285
Query: 207 WT--------PEFIDFVSRCLVKNPEERATASEMLNHEFI 238
WT PE I SR L P R T E H F
Sbjct: 286 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,031,431
Number of Sequences: 62578
Number of extensions: 327835
Number of successful extensions: 3906
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 877
Number of HSP's gapped (non-prelim): 1950
length of query: 251
length of database: 14,973,337
effective HSP length: 96
effective length of query: 155
effective length of database: 8,965,849
effective search space: 1389706595
effective search space used: 1389706595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)