Psyllid ID: psy3254

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------
Protein Sequence
MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccEEEEcEEEcccccccccccccccccccccHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHEEEEEcccccccccccccccHHHHHHHHHHHcccHcccHcHHHHHcccHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccccccHHEEEcccccEEEccccccEEEccccccccccccccccccHHHEEHHHccccEEEEcc
Coil and Loop (DISEMBL)
maegkppygdihpmraifmiptkpppsfrepdvwtpeFIDFVSRClvknpeerATASEMLNhefiqvspggnippgppgapsgggfcdfeflkflsyDDLQHRMANLDCEMEREIEQLRRNILLNteghakladfgvagqltDTMAKrntvigtpfwmaPEVIQEIGYDCVADMWSL
Flexible Loop (DISEMBL)
maegkppygdihpmraIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL
Low Complexity Region (SEG)
MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSpggnippgppgapsgggFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL
Disordered region (IsUnstruct)
*************MRAIFMIP********EPDVWTPEFIDFVSRCLVK***********************************GGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMW**
Disordered Region (DISOPRED)
**EGKPPYGDIHPMRAIFMIPTKPPP*FRE*DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL
Disordered Region (DISEMBL)
MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL
Disordered Region (DISPRO)
****KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSxxxxxxxxxxxxxxxxxxxxxLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	177	2.2.26 [Sep-21-2011]
Q8T0S6	669	Serine/threonine-protein	yes	N/A	0.372	0.098	0.803	6e-28
Q9JI11	487	Serine/threonine-protein	yes	N/A	0.322	0.117	0.964	1e-27
A4K2T0	487	Serine/threonine-protein	yes	N/A	0.305	0.110	0.964	1e-27
Q5E9L6	487	Serine/threonine-protein	yes	N/A	0.305	0.110	0.964	1e-27
A4K2Y1	487	Serine/threonine-protein	N/A	N/A	0.305	0.110	0.964	1e-27
A4K2W5	487	Serine/threonine-protein	N/A	N/A	0.305	0.110	0.964	1e-27
Q9JI10	497	Serine/threonine-protein	no	N/A	0.271	0.096	0.964	1e-27
Q13043	487	Serine/threonine-protein	yes	N/A	0.305	0.110	0.964	1e-27
A4K2P5	487	Serine/threonine-protein	N/A	N/A	0.305	0.110	0.964	1e-27
Q13188	491	Serine/threonine-protein	no	N/A	0.282	0.101	0.964	1e-27

>sp|Q8T0S6|HIPPO_DROME Serine/threonine-protein kinase hippo OS=Drosophila melanogaster GN=hpo PE=1 SV=1

 Score =  123 bits (309), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 61/66 (92%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYG+IHPMRAIFMIP KPPPSFREPD W+ EFIDFVS+CLVK P++RATA+E+L
Sbjct: 229 MAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRATATELL 288

Query: 61  NHEFIQ 66
            HEFI+
Sbjct: 289 EHEFIR 294

Plays a key role in the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. The Hippo/SWH signaling pathway inhibits the activity of the transcriptional complex formed by Scalloped (sd) and Yki and the target genes of this pathway include cyclin-E (cycE), diap1 and bantam. Phosphorylates Sav, Wts and Th/DIAP1. Regulates the level of Th/DIAP1 apoptosis inhibitor.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9JI11|STK4_MOUSE Serine/threonine-protein kinase 4 OS=Mus musculus GN=Stk4 PE=1 SV=1

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 154 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 210

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on 'Ser-212' and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on 'Ser-650' and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A4K2T0|STK4_MACMU Serine/threonine-protein kinase 4 OS=Macaca mulatta GN=STK4 PE=1 SV=1

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 154 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 210

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on 'Ser-212' and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on 'Ser-650' and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.

Macaca mulatta (taxid: 9544)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5E9L6|STK4_BOVIN Serine/threonine-protein kinase 4 OS=Bos taurus GN=STK4 PE=2 SV=1

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 154 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 210

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on 'Ser-212' and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on 'Ser-650' and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A4K2Y1|STK4_CHLAE Serine/threonine-protein kinase 4 OS=Chlorocebus aethiops GN=STK4 PE=1 SV=1

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 154 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 210

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on 'Ser-212' and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on 'Ser-650' and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.

Chlorocebus aethiops (taxid: 9534)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A4K2W5|STK4_AOTNA Serine/threonine-protein kinase 4 OS=Aotus nancymaae GN=STK4 PE=1 SV=1

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 154 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 210

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on 'Ser-212' and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on 'Ser-650' and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.

Aotus nancymaae (taxid: 37293)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9JI10|STK3_MOUSE Serine/threonine-protein kinase 3 OS=Mus musculus GN=Stk3 PE=1 SV=1

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 151 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 207

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates NKX2-1. Phosphorylates NEK2 and plays a role in centrosome disjunction by regulating the localization of NEK2 to centrosomes, and its ability to phosphorylate CROCC and CEP250. In conjunction with SAV1, activates the transcriptional activity of ESR1 through the modulation of its phosphorylation. Positively regulates RAF1 activation via suppression of the inhibitory phosphorylation of RAF1 on 'Ser-259'. Phosphorylates MOBKL1A and RASSF2. Phosphorylates MOBKL1B on 'Thr-74'. Acts cooperatively with MOBKL1B to activate STK38.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q13043|STK4_HUMAN Serine/threonine-protein kinase 4 OS=Homo sapiens GN=STK4 PE=1 SV=2

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 154 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 210

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation (By similarity). Phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on 'Ser-212' and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on 'Ser-650' and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A4K2P5|STK4_COLGU Serine/threonine-protein kinase 4 OS=Colobus guereza GN=STK4 PE=1 SV=1

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 154 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 210

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates 'Ser-14' of histone H2B (H2BS14ph) during apoptosis. Phosphorylates FOXO3 upon oxidative stress, which results in its nuclear translocation and cell death initiation. Phosphorylates MOBKL1A, MOBKL1B and RASSF2. Phosphorylates TNNI3 (cardiac Tn-I) and alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T). Phosphorylates FOXO1 on 'Ser-212' and regulates its activation and stimulates transcription of PMAIP1 in a FOXO1-dependent manner. Phosphorylates SIRT1 and inhibits SIRT1-mediated p53/TP53 deacetylation, thereby promoting p53/TP53 dependent transcription and apoptosis upon DNA damage. Acts as an inhibitor of PKB/AKT1. Phosphorylates AR on 'Ser-650' and suppresses its activity by intersecting with PKB/AKT1 signaling and antagonizing formation of AR-chromatin complexes.

Colobus guereza (taxid: 33548)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q13188|STK3_HUMAN Serine/threonine-protein kinase 3 OS=Homo sapiens GN=STK3 PE=1 SV=2

 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 151 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 207

Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. STK3/MST2 and STK4/MST1 are required to repress proliferation of mature hepatocytes, to prevent activation of facultative adult liver stem cells (oval cells), and to inhibit tumor formation. Phosphorylates NKX2-1 (By similarity). Phosphorylates NEK2 and plays a role in centrosome disjunction by regulating the localization of NEK2 to centrosome, and its ability to phosphorylate CROCC and CEP250. In conjunction with SAV1, activates the transcriptional activity of ESR1 through the modulation of its phosphorylation. Positively regulates RAF1 activation via suppression of the inhibitory phosphorylation of RAF1 on 'Ser-259'. Phosphorylates MOBKL1A and RASSF2. Phosphorylates MOBKL1B on 'Thr-74'. Acts cooperatively with MOBKL1B to activate STK38.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
345480521	528	PREDICTED: serine/threonine-protein kina	0.367	0.123	0.938	3e-30
156551419	521	PREDICTED: serine/threonine-protein kina	0.367	0.124	0.938	3e-30
350421067	521	PREDICTED: serine/threonine-protein kina	0.367	0.124	0.923	8e-30
328786401	521	PREDICTED: serine/threonine-protein kina	0.367	0.124	0.923	8e-30
340719762	521	PREDICTED: serine/threonine-protein kina	0.367	0.124	0.923	8e-30
328706800	541	PREDICTED: serine/threonine-protein kina	0.401	0.131	0.807	1e-29
322795456	400	hypothetical protein SINV_14160 [Solenop	0.372	0.165	0.909	2e-29
383847106	521	PREDICTED: serine/threonine-protein kina	0.367	0.124	0.907	3e-29
332017045	529	Serine/threonine-protein kinase 3 [Acrom	0.367	0.122	0.907	4e-29
170027953	615	serine/threonine-protein kinase 3 [Culex	0.372	0.107	0.863	4e-29

>gi|345480521|ref|XP_003424164.1| PREDICTED: serine/threonine-protein kinase hippo-like isoform 2 [Nasonia vitripennis]

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/65 (93%), Positives = 63/65 (96%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+PEFIDFVS CLVKNPEERATASE+L
Sbjct: 217 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDQWSPEFIDFVSVCLVKNPEERATASELL 276

Query: 61  NHEFI 65
           NHEFI
Sbjct: 277 NHEFI 281

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156551419|ref|XP_001604121.1| PREDICTED: serine/threonine-protein kinase hippo-like isoform 1 [Nasonia vitripennis]

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 61/65 (93%), Positives = 63/65 (96%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+PEFIDFVS CLVKNPEERATASE+L
Sbjct: 210 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDQWSPEFIDFVSVCLVKNPEERATASELL 269

Query: 61  NHEFI 65
           NHEFI
Sbjct: 270 NHEFI 274

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350421067|ref|XP_003492721.1| PREDICTED: serine/threonine-protein kinase 3-like [Bombus impatiens]

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 60/65 (92%), Positives = 63/65 (96%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+PEFIDFVS CLVKNPEERATA+E+L
Sbjct: 210 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDQWSPEFIDFVSGCLVKNPEERATATELL 269

Query: 61  NHEFI 65
           NHEFI
Sbjct: 270 NHEFI 274

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786401|ref|XP_393691.4| PREDICTED: serine/threonine-protein kinase 3-like isoform 1 [Apis mellifera] gi|380027210|ref|XP_003697322.1| PREDICTED: serine/threonine-protein kinase 3-like [Apis florea]

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 60/65 (92%), Positives = 63/65 (96%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+PEFIDFVS CLVKNPEERATA+E+L
Sbjct: 210 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDQWSPEFIDFVSGCLVKNPEERATATELL 269

Query: 61  NHEFI 65
           NHEFI
Sbjct: 270 NHEFI 274

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719762|ref|XP_003398316.1| PREDICTED: serine/threonine-protein kinase 3-like [Bombus terrestris]

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 60/65 (92%), Positives = 63/65 (96%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+PEFIDFVS CLVKNPEERATA+E+L
Sbjct: 210 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDQWSPEFIDFVSGCLVKNPEERATATELL 269

Query: 61  NHEFI 65
           NHEFI
Sbjct: 270 NHEFI 274

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706800|ref|XP_001950941.2| PREDICTED: serine/threonine-protein kinase hippo-like [Acyrthosiphon pisum]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/78 (80%), Positives = 69/78 (88%), Gaps = 7/78 (8%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+PEFIDFVS+CL+KNPEERATA++ML
Sbjct: 231 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDKWSPEFIDFVSQCLIKNPEERATATKML 290

Query: 61  NHEFIQVSPGGNIPPGPP 78
           +HEFI     GN  P PP
Sbjct: 291 DHEFI-----GN--PKPP 301

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322795456|gb|EFZ18201.1| hypothetical protein SINV_14160 [Solenopsis invicta]

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/66 (90%), Positives = 63/66 (95%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+PEFIDFVS CLVKNPEERATASE+L
Sbjct: 206 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDQWSPEFIDFVSGCLVKNPEERATASELL 265

Query: 61  NHEFIQ 66
            HEFI+
Sbjct: 266 QHEFIR 271

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383847106|ref|XP_003699196.1| PREDICTED: serine/threonine-protein kinase 3-like [Megachile rotundata]

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 59/65 (90%), Positives = 62/65 (95%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+ EFIDFVS CLVKNPEERATA+E+L
Sbjct: 210 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDQWSSEFIDFVSGCLVKNPEERATATELL 269

Query: 61  NHEFI 65
           NHEFI
Sbjct: 270 NHEFI 274

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332017045|gb|EGI57844.1| Serine/threonine-protein kinase 3 [Acromyrmex echinatior]

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/65 (90%), Positives = 62/65 (95%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPD W+PEFIDFVS CLVKNPEERATA+E+L
Sbjct: 217 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDQWSPEFIDFVSGCLVKNPEERATATELL 276

Query: 61  NHEFI 65
            HEFI
Sbjct: 277 QHEFI 281

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170027953|ref|XP_001841861.1| serine/threonine-protein kinase 3 [Culex quinquefasciatus] gi|167868331|gb|EDS31714.1| serine/threonine-protein kinase 3 [Culex quinquefasciatus]

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 57/66 (86%), Positives = 64/66 (96%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPYGDIHPMRAIFMIPTKPPPSFR+PD+W+PEFIDFVS CLVKNPEERATA+++L
Sbjct: 207 MAEGKPPYGDIHPMRAIFMIPTKPPPSFRDPDIWSPEFIDFVSLCLVKNPEERATATDLL 266

Query: 61  NHEFIQ 66
            HEFI+
Sbjct: 267 THEFIR 272

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	177
FB|FBgn0261456	669	hpo "hippo" [Drosophila melano	0.372	0.098	0.803	1.4e-35
UNIPROTKB|Q6IP06	493	stk3 "Serine/threonine-protein	0.322	0.115	0.964	1.1e-25
UNIPROTKB|Q802A6	491	STK4 "Serine/threonine-protein	0.322	0.116	0.947	4e-25
ZFIN|ZDB-GENE-030131-2845	492	stk3 "serine/threonine kinase	0.322	0.115	0.964	1.1e-25
RGD|68412	491	Stk3 "serine/threonine kinase	0.322	0.116	0.964	1.1e-25
UNIPROTKB|O54748	491	Stk3 "Serine/threonine-protein	0.322	0.116	0.964	1.1e-25
MGI|MGI:1928487	497	Stk3 "serine/threonine kinase	0.322	0.114	0.964	1.2e-25
UNIPROTKB|F5H5B4	432	STK4 "Serine/threonine-protein	0.372	0.152	0.681	9.4e-31
UNIPROTKB|F1P4Y3	486	STK4 "Serine/threonine-protein	0.322	0.117	0.964	1e-25
RGD|1312035	487	Stk4 "serine/threonine kinase	0.322	0.117	0.964	1.1e-25

FB|FBgn0261456 hpo "hippo" [Drosophila melanogaster (taxid:7227)]

 Score = 303 (111.7 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
 Identities = 53/66 (80%), Positives = 61/66 (92%)

Query:     1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
             MAEGKPPYG+IHPMRAIFMIP KPPPSFREPD W+ EFIDFVS+CLVK P++RATA+E+L
Sbjct:   229 MAEGKPPYGEIHPMRAIFMIPQKPPPSFREPDRWSTEFIDFVSKCLVKEPDDRATATELL 288

Query:    61 NHEFIQ 66
              HEFI+
Sbjct:   289 EHEFIR 294

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=ISS;NAS

GO:0006468 "protein phosphorylation" evidence=IDA;NAS

GO:0005575 "cellular_component" evidence=ND

GO:0006915 "apoptotic process" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0008283 "cell proliferation" evidence=IMP

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0006917 "induction of apoptosis" evidence=IMP

GO:0046621 "negative regulation of organ growth" evidence=TAS

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0045464 "R8 cell fate specification" evidence=IMP

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IMP

GO:0016301 "kinase activity" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0042771 "intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP

GO:0001654 "eye development" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0072089 "stem cell proliferation" evidence=IDA

GO:0060253 "negative regulation of glial cell proliferation" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0035265 "organ growth" evidence=IDA

UNIPROTKB|Q6IP06 stk3 "Serine/threonine-protein kinase 3" [Xenopus laevis (taxid:8355)]

 Score = 295 (108.9 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query:   121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct:   150 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 206

GO:0035329 "hippo signaling cascade" evidence=ISS

UNIPROTKB|Q802A6 STK4 "Serine/threonine-protein kinase 3/4" [Squalus acanthias (taxid:7797)]

 Score = 290 (107.1 bits), Expect = 4.0e-25, P = 4.0e-25
 Identities = 54/57 (94%), Positives = 56/57 (98%)

Query:   121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             NILLN EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct:   156 NILLNNEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 212

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0006917 "induction of apoptosis" evidence=ISS

GO:0035329 "hippo signaling cascade" evidence=ISS

ZFIN|ZDB-GENE-030131-2845 stk3 "serine/threonine kinase 3 (STE20 homolog, yeast)" [Danio rerio (taxid:7955)]

 Score = 295 (108.9 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query:   121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct:   150 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 206

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=ISS

GO:0035329 "hippo signaling cascade" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

RGD|68412 Stk3 "serine/threonine kinase 3" [Rattus norvegicus (taxid:10116)]

 Score = 295 (108.9 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query:   121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct:   151 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 207

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0001841 "neural tube formation" evidence=ISO

GO:0003157 "endocardium development" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;ISS

GO:0005524 "ATP binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;ISS

GO:0006468 "protein phosphorylation" evidence=ISO;ISS

GO:0006915 "apoptotic process" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

GO:0007417 "central nervous system development" evidence=ISO

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0035329 "hippo signaling cascade" evidence=ISO;ISS

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0043539 "protein serine/threonine kinase activator activity" evidence=ISO

GO:0046330 "positive regulation of JNK cascade" evidence=ISO

GO:0046621 "negative regulation of organ growth" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=ISO

GO:0060215 "primitive hemopoiesis" evidence=ISO

GO:0060706 "cell differentiation involved in embryonic placenta development" evidence=ISO

GO:0071902 "positive regulation of protein serine/threonine kinase activity" evidence=ISO

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=ISO

UNIPROTKB|O54748 Stk3 "Serine/threonine-protein kinase 3" [Rattus norvegicus (taxid:10116)]

 Score = 295 (108.9 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query:   121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct:   151 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 207

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1928487 Stk3 "serine/threonine kinase 3" [Mus musculus (taxid:10090)]

 Score = 295 (108.9 bits), Expect = 1.2e-25, P = 1.2e-25
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query:   121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct:   151 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 207

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000287 "magnesium ion binding" evidence=ISO

GO:0001841 "neural tube formation" evidence=IGI

GO:0003157 "endocardium development" evidence=IGI

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0005524 "ATP binding" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISO

GO:0006915 "apoptotic process" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=ISO

GO:0007417 "central nervous system development" evidence=IGI

GO:0008285 "negative regulation of cell proliferation" evidence=IGI

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0035329 "hippo signaling cascade" evidence=ISO;IMP

GO:0043065 "positive regulation of apoptotic process" evidence=IGI

GO:0043539 "protein serine/threonine kinase activator activity" evidence=ISO

GO:0046330 "positive regulation of JNK cascade" evidence=IGI

GO:0046621 "negative regulation of organ growth" evidence=IGI

GO:0046872 "metal ion binding" evidence=IEA

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=IGI

GO:0060215 "primitive hemopoiesis" evidence=IGI

GO:0060706 "cell differentiation involved in embryonic placenta development" evidence=IGI

GO:0071902 "positive regulation of protein serine/threonine kinase activity" evidence=ISO

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=ISO;IGI

UNIPROTKB|F5H5B4 STK4 "Serine/threonine-protein kinase 4" [Homo sapiens (taxid:9606)]

 Score = 274 (101.5 bits), Expect = 9.4e-31, Sum P(2) = 9.4e-31
 Identities = 45/66 (68%), Positives = 58/66 (87%)

Query:     1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
             MAEGKPPY DIHPMRAIFMIPT PPP+FR+P++W+  F DFV +CLVK+PE+RATA+++L
Sbjct:   162 MAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLL 221

Query:    61 NHEFIQ 66
              H F++
Sbjct:   222 QHPFVR 227

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1P4Y3 STK4 "Serine/threonine-protein kinase 4" [Gallus gallus (taxid:9031)]

 Score = 295 (108.9 bits), Expect = 1.0e-25, P = 1.0e-25
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query:   121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct:   153 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 209

GO:0000287 "magnesium ion binding" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0001569 "patterning of blood vessels" evidence=IEA

GO:0001841 "neural tube formation" evidence=IEA

GO:0003157 "endocardium development" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0007417 "central nervous system development" evidence=IEA

GO:0008134 "transcription factor binding" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0030216 "keratinocyte differentiation" evidence=IEA

GO:0035329 "hippo signaling cascade" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043539 "protein serine/threonine kinase activator activity" evidence=IEA

GO:0046621 "negative regulation of organ growth" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0060215 "primitive hemopoiesis" evidence=IEA

GO:0060706 "cell differentiation involved in embryonic placenta development" evidence=IEA

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA

RGD|1312035 Stk4 "serine/threonine kinase 4" [Rattus norvegicus (taxid:10116)]

 Score = 295 (108.9 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query:   121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct:   154 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 210

GO:0000287 "magnesium ion binding" evidence=IEA;ISO

GO:0000902 "cell morphogenesis" evidence=IEA;ISO

GO:0001569 "patterning of blood vessels" evidence=IEA;ISO

GO:0001841 "neural tube formation" evidence=IEA;ISO

GO:0003157 "endocardium development" evidence=IEA;ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006917 "induction of apoptosis" evidence=IEA;ISO

GO:0007243 "intracellular protein kinase cascade" evidence=IEA;ISO

GO:0007417 "central nervous system development" evidence=IEA;ISO

GO:0008134 "transcription factor binding" evidence=IEA;ISO

GO:0008285 "negative regulation of cell proliferation" evidence=IEA;ISO

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA;ISO

GO:0030216 "keratinocyte differentiation" evidence=IEA;ISO

GO:0035329 "hippo signaling cascade" evidence=IEA;ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0043539 "protein serine/threonine kinase activator activity" evidence=IEA;ISO

GO:0046621 "negative regulation of organ growth" evidence=IEA;ISO

GO:0046777 "protein autophosphorylation" evidence=IEA;ISO

GO:0046983 "protein dimerization activity" evidence=ISO

GO:0060215 "primitive hemopoiesis" evidence=IEA;ISO

GO:0060706 "cell differentiation involved in embryonic placenta development" evidence=IEA;ISO

GO:0071902 "positive regulation of protein serine/threonine kinase activity" evidence=ISO

GO:0090090 "negative regulation of canonical Wnt receptor signaling pathway" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	177
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	6e-39
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-37
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-32
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-30
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-27
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-27
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-27
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-26
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-26
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-26
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-23
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-23
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-23
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-23
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-22
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-22
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-22
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-21
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-21
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-20
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-19
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-19
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-18
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-18
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	5e-18
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-18
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	9e-18
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-17
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-17
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-17
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-17
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-16
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-16
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-16
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-15
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-15
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-15
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-15
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-15
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-15
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-15
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	9e-15
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-14
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-14
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-14
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-14
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-14
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-14
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	3e-14
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-14
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-14
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	6e-14
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	7e-14
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	7e-14
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-14
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	8e-14
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-13
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-13
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-13
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-13
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-13
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-13
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-13
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-13
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-13
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	9e-13
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	9e-13
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	9e-13
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-12
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-12
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-12
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-12
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-12
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-12
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-12
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	4e-12
pfam11629	49	pfam11629, Mst1_SARAH, C terminal SARAH domain of	4e-12
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	6e-12
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	9e-12
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	9e-12
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-11
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-11
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-11
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-11
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	3e-11
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-11
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-11
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-11
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-11
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	5e-11
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	5e-11
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	6e-11
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	7e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	9e-11
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-10
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-10
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-10
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-10
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-10
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-10
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-10
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-10
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-10
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-10
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	5e-10
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-10
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	7e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	9e-10
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-09
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-09
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-09
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-09
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-09
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	4e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-09
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	6e-09
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	8e-09
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-08
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-08
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-08
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-08
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-08
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-08
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	3e-08
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-08
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	3e-08
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	4e-08
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	4e-08
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	5e-08
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	6e-08
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	7e-08
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	9e-08
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-07
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	1e-07
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-07
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-07
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	1e-07
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-07
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-07
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-07
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-07
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-07
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-07
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	4e-07
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	5e-07
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	5e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	6e-07
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-07
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	7e-07
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	8e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	8e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-07
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	8e-07
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	9e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	9e-07
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	9e-07
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	9e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	9e-07
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-06
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-06
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-06
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	2e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-06
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-06
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-06
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-06
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-06
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	3e-06
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-06
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-06
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	4e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	6e-06
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	7e-06
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	8e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	9e-06
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-05
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-05
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	2e-05
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	2e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-05
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-05
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	3e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-05
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	4e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-05
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	5e-05
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	6e-05
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	7e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	8e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	9e-05
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	9e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-04
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-04
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	3e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-04
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	6e-04
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	6e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-04
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	7e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	8e-04
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.001
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.001
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.001
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.001
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.002
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.002
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.002
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.002
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.002
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.002
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.002
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.002
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.002
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.002
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.002
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.002
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.003
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	0.003
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.003
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	0.003
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.003
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.003
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.003
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	0.004
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.004

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  132 bits (335), Expect = 6e-39
 Identities = 45/65 (69%), Positives = 54/65 (83%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPY DIHPMRAIFMIP KPPP+  +P+ W+PEF DFV +CLVK+PEER +A ++L
Sbjct: 192 MAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLL 251

Query: 61  NHEFI 65
            H FI
Sbjct: 252 QHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  128 bits (323), Expect = 4e-37
 Identities = 50/57 (87%), Positives = 53/57 (92%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN EG AKLADFGV+GQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+  AD+WSL
Sbjct: 129 NILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSL 185

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  116 bits (292), Expect = 3e-32
 Identities = 42/57 (73%), Positives = 49/57 (85%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ EG  KLADFGV+GQLT TM+KRNT +GTPFWMAPEVI++ GYD  AD+WSL
Sbjct: 128 NILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSL 184

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  110 bits (277), Expect = 3e-30
 Identities = 34/64 (53%), Positives = 46/64 (71%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +AEGKPPY ++ PM+A+F I T  PP  R P+ W+ EF DF+ +CL KNPE+R TA ++L
Sbjct: 190 LAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLL 249

Query: 61  NHEF 64
            H F
Sbjct: 250 KHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  103 bits (259), Expect = 2e-27
 Identities = 35/60 (58%), Positives = 42/60 (70%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE---IGYDCVADMWSL 177
           NILL  +G  KLADFGV+ QLT T+AKR + IGTP+WMAPEV       GYD   D+W+L
Sbjct: 131 NILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWAL 190

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  103 bits (258), Expect = 3e-27
 Identities = 34/65 (52%), Positives = 47/65 (72%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +A+GKPP  D+HPMRA+F IP  PPP+ + P+ W+ +F DF+S CL+KN E+R    E+L
Sbjct: 211 LADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELL 270

Query: 61  NHEFI 65
            H FI
Sbjct: 271 EHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  102 bits (256), Expect = 4e-27
 Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 2/66 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK--PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
           +AE +PP  D+HPMRA+F+I     PPP  ++ + W+P F DF+ +CL K+P++R TA++
Sbjct: 197 LAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATK 256

Query: 59  MLNHEF 64
           +L H F
Sbjct: 257 LLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  101 bits (254), Expect = 1e-26
 Identities = 34/66 (51%), Positives = 50/66 (75%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEG+PPY    P+RA+F+I TK  P  + P+ W+PEF DF+++CLVK+PE+R +A E+L
Sbjct: 209 MAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELL 268

Query: 61  NHEFIQ 66
            H F++
Sbjct: 269 QHPFLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  100 bits (251), Expect = 3e-26
 Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +A+G+PP  D+HPMR +F+IP   PPS  E + ++  F DFVS CL K+P+ER +A E+L
Sbjct: 191 LAKGEPPLSDLHPMRVLFLIPKNNPPSL-EGNKFSKPFKDFVSLCLNKDPKERPSAKELL 249

Query: 61  NHEFI 65
            H+FI
Sbjct: 250 KHKFI 254

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 98.8 bits (247), Expect = 8e-26
 Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL ++G  KL DFG++ QL+DT A RNT++GTP+WMAPEVI    YD  AD+WSL
Sbjct: 128 NILLTSDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSL 183

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 93.0 bits (232), Expect = 1e-23
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +GH KLADFG+A QL     K  T +GTP +MAPEV+   GY    D+WSL
Sbjct: 127 NILLDEDGHVKLADFGLARQLDPGE-KLTTFVGTPEYMAPEVLLGKGYGKAVDIWSL 182

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 93.6 bits (232), Expect = 1e-23
 Identities = 41/57 (71%), Positives = 47/57 (82%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G  KLADFGVAGQLTDT  KRNT +GTPFWMAPEVIQ+  YD  AD+WSL
Sbjct: 131 NVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSL 187

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 93.4 bits (233), Expect = 2e-23
 Identities = 34/57 (59%), Positives = 42/57 (73%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +G  KLADFG A QLT   +KRN+V+GTP+WMAPEVI+   Y    D+WSL
Sbjct: 146 NILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSL 202

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 92.0 bits (229), Expect = 4e-23
 Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADMW 175
           NILL      KL DFGV+ QL  T+ +RNT IGTP+WMAPEVI      +  YD  +D+W
Sbjct: 143 NILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVW 202

Query: 176 SL 177
           SL
Sbjct: 203 SL 204

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 91.3 bits (226), Expect = 1e-22
 Identities = 40/57 (70%), Positives = 47/57 (82%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G  KLADFGVAGQLTDT  KRNT +GTPFWMAPEVI++  YD  AD+WSL
Sbjct: 131 NVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSL 187

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 90.0 bits (224), Expect = 2e-22
 Identities = 30/57 (52%), Positives = 38/57 (66%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL   +G  KLADFGVA +L D      +V+GTP+WMAPEVI+  G    +D+WSL
Sbjct: 129 NILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSL 185

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 90.1 bits (223), Expect = 3e-22
 Identities = 32/65 (49%), Positives = 47/65 (72%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           + +G PP  D+HPMRA+F IP  PPP+  +P++W+ EF DF+ +CL K+ E+R T S++L
Sbjct: 222 LGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLL 281

Query: 61  NHEFI 65
            H FI
Sbjct: 282 QHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 88.6 bits (220), Expect = 1e-21
 Identities = 26/67 (38%), Positives = 44/67 (65%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +A+ +PP+ +++PMR +  I    PP+  +P  W+  F DF+  CLVK+P++R TA+E+L
Sbjct: 201 LAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELL 260

Query: 61  NHEFIQV 67
            H F+  
Sbjct: 261 KHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 87.8 bits (217), Expect = 2e-21
 Identities = 40/57 (70%), Positives = 46/57 (80%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+  G  KLADFGVAGQLTDT  KRNT +GTPFWMAPEVI++  YD  AD+WSL
Sbjct: 131 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 187

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 85.2 bits (211), Expect = 2e-20
 Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
           NIL+   G+ KL DFGVA  L    +KR+T +GTP+WMAPEVI E   YD  AD+WSL
Sbjct: 131 NILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSL 188

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 24/57 (42%), Positives = 38/57 (66%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI L + G  KL DFG++  L+ T+    TV+GTP++++PE+ Q   Y+  +D+WSL
Sbjct: 133 NIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSL 189

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 81.7 bits (202), Expect = 4e-19
 Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 17/94 (18%)

Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
            E L FL    + HR  +L             NILL  +G  KLADFGV+ +   T+ KR
Sbjct: 113 LEALNFLHSHKVIHR--DLKAG----------NILLTLDGDVKLADFGVSAKNKSTLQKR 160

Query: 149 NTVIGTPFWMAPEVI-----QEIGYDCVADMWSL 177
           +T IGTP+WMAPEV+     ++  YD  AD+WSL
Sbjct: 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSL 194

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 79.7 bits (197), Expect = 1e-18
 Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTM----AKRNTVIGTPFWMAPEVIQEI-GYDCVADMW 175
           NILL  +G  K+ADFGV+  L D        R T +GTP WMAPEV++++ GYD  AD+W
Sbjct: 132 NILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIW 191

Query: 176 SL 177
           S 
Sbjct: 192 SF 193

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 78.3 bits (194), Expect = 4e-18
 Identities = 28/57 (49%), Positives = 38/57 (66%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +GH KL DFG+A +L+   ++ NT  GTP ++APEV+   GY    D WSL
Sbjct: 123 NILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSL 179

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 78.9 bits (194), Expect = 5e-18
 Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEG PP  D+HPMRA+F+IP  PPP  +    W+ +FIDF+  CLVKN   R +  ++L
Sbjct: 219 MAEGAPPLCDMHPMRALFLIPRNPPPKLKSKK-WSKKFIDFIEGCLVKNYLSRPSTEQLL 277

Query: 61  NHEFI 65
            H FI
Sbjct: 278 KHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 78.0 bits (193), Expect = 7e-18
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL++++G  KLADFG A +L   +T     +V GTP+WMAPEVI+   Y   AD+WSL
Sbjct: 131 NILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSL 189

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 78.1 bits (192), Expect = 9e-18
 Identities = 37/62 (59%), Positives = 42/62 (67%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADMW 175
           NILL TEG  KL DFGV+ QLT T  +RNT +GTPFWMAPEVI      +  YD   D+W
Sbjct: 158 NILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVW 217

Query: 176 SL 177
           SL
Sbjct: 218 SL 219

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 77.0 bits (189), Expect = 2e-17
 Identities = 37/62 (59%), Positives = 42/62 (67%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADMW 175
           NILL TEG  KL DFGV+ QLT T  +RNT +GTPFWMAPEVI      +  YD   D+W
Sbjct: 154 NILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVW 213

Query: 176 SL 177
           SL
Sbjct: 214 SL 215

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 77.0 bits (189), Expect = 3e-17
 Identities = 26/66 (39%), Positives = 42/66 (63%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           + +G PP  D+HP++ +F IP  PPP+   P+ W   F  F+S+CL+K+ E R + + +L
Sbjct: 226 LGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLL 285

Query: 61  NHEFIQ 66
            H FI+
Sbjct: 286 EHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 76.3 bits (188), Expect = 3e-17
 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M +G+PPY +  P++A+  I    PP  +     +P    F+ R LV++P +RATA+E+L
Sbjct: 208 MVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELL 267

Query: 61  NHEFI-QVSPGGNIPP 75
           NH F+ +  P  +I P
Sbjct: 268 NHPFLAKAGPPSSIVP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 75.6 bits (187), Expect = 5e-17
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREP-DVWTPEFIDFVSRCLVKNPEERATASEM 59
           +  GKPP+     +  +F    KP P F  P    +PE  D + + LVK+PE+R TA E 
Sbjct: 189 LLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEA 248

Query: 60  LNHEFI 65
           L H F 
Sbjct: 249 LQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 74.4 bits (183), Expect = 2e-16
 Identities = 26/56 (46%), Positives = 39/56 (69%)

Query: 122 ILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           ILL ++G  KL+DFG   Q++  + +R +++GTP+WMAPEVI  + Y    D+WSL
Sbjct: 146 ILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 73.9 bits (181), Expect = 3e-16
 Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 5/71 (7%)

Query: 110 EMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEI 166
           +M R+I+    NILL   GH KLADFGV+ Q+T T+AKR + IGTP+WMAPEV    ++ 
Sbjct: 127 KMHRDIKG--ANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKG 184

Query: 167 GYDCVADMWSL 177
           GY+ + D+W++
Sbjct: 185 GYNQLCDIWAV 195

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 73.5 bits (180), Expect = 3e-16
 Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 5/71 (7%)

Query: 110 EMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEI 166
           +M R+I+    NILL   G  KLADFGVA ++T T+AKR + IGTP+WMAPEV    +  
Sbjct: 127 KMHRDIKG--ANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNG 184

Query: 167 GYDCVADMWSL 177
           GY+ + D+W++
Sbjct: 185 GYNQLCDIWAV 195

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 72.3 bits (178), Expect = 8e-16
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
           NILL+  G  K+ADFG+A +L  + +   T +GTP++MAPEV+    GY    D+WSL
Sbjct: 128 NILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSL 185

Length = 260

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 72.0 bits (177), Expect = 1e-15
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL+N+ G  KL DFGV+GQL +++AK  T +GT  +MAPE IQ   Y   +D+WSL
Sbjct: 131 NILVNSRGQIKLCDFGVSGQLVNSLAK--TFVGTSSYMAPERIQGNDYSVKSDIWSL 185

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 71.6 bits (175), Expect = 2e-15
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +A+G+PP  D+HPMR +F+IP   PP+      ++  F +FV  CL K+P  R TA E+L
Sbjct: 194 LAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQ--YSKPFKEFVEACLNKDPRFRPTAKELL 251

Query: 61  NHEFI 65
            H+FI
Sbjct: 252 KHKFI 256

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 71.3 bits (174), Expect = 3e-15
 Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEG PP  D+HPMRA+F+IP  P P  +    W+ +F  F+  CLVKN  +R T  +++
Sbjct: 209 MAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK-WSKKFQSFIESCLVKNHSQRPTTEQLM 267

Query: 61  NHEFI 65
            H FI
Sbjct: 268 KHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 71.1 bits (174), Expect = 3e-15
 Identities = 26/68 (38%), Positives = 46/68 (67%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M EG+PPY + +P+RA+++I T   P  + P+  +  F DF++RCL  + E+R +A E+L
Sbjct: 208 MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 267

Query: 61  NHEFIQVS 68
            H F++++
Sbjct: 268 QHPFLKIA 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 70.7 bits (173), Expect = 4e-15
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 12/86 (13%)

Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           L+FL  + + HR    D            NILL  +G  KL DFG   Q+T   +KR+T+
Sbjct: 128 LEFLHSNQVIHRDIKSD------------NILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175

Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GTP+WMAPEV+    Y    D+WSL
Sbjct: 176 VGTPYWMAPEVVTRKAYGPKVDIWSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 70.8 bits (173), Expect = 4e-15
 Identities = 26/68 (38%), Positives = 44/68 (64%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MA+ +PP+ +++PMR +  I    PP+  +P  W+ EF DF+ +CL KN + R T +++L
Sbjct: 201 MAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLL 260

Query: 61  NHEFIQVS 68
            H F+ V+
Sbjct: 261 QHPFVTVN 268

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 69.2 bits (170), Expect = 5e-15
 Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%)

Query: 121 NILL-NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCVADMWSL 177
           NILL +  G  KLADFG++  LT   +   T++GTP +MAPEV+   G Y   +D+WSL
Sbjct: 122 NILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSL 180

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 70.1 bits (172), Expect = 8e-15
 Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL  +G  KL DFGV+G+L +++A   T  GT F+MAPE IQ   Y   +D+WSL
Sbjct: 135 NILLTRKGQVKLCDFGVSGELVNSLAG--TFTGTSFYMAPERIQGKPYSITSDVWSL 189

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 69.6 bits (170), Expect = 9e-15
 Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 5/63 (7%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADM 174
           +N+LL      KL DFGV+ QL  T+ +RNT IGTP+WMAPEVI      +  YD  +D+
Sbjct: 150 QNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDI 209

Query: 175 WSL 177
           WSL
Sbjct: 210 WSL 212

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 69.2 bits (170), Expect = 1e-14
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +  G PPY D++PM A+F I     P    P+  +PE  DF+ +C  K+P  R TA ++L
Sbjct: 192 LLTGNPPYYDLNPMAALFRIVQDDHPPL--PEGISPELKDFLMQCFQKDPNLRPTAKQLL 249

Query: 61  NHEFI 65
            H +I
Sbjct: 250 KHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 69.7 bits (170), Expect = 1e-14
 Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMW 175
           N+LL  +G  KLADFGV+ +   T+ +R++ IGTP+WMAPEV+     ++  YD  AD+W
Sbjct: 140 NVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 199

Query: 176 SL 177
           SL
Sbjct: 200 SL 201

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 69.2 bits (170), Expect = 1e-14
 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 4/59 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSL 177
           N+L+N++G  K+ADFG++  L +T+ + NT +GT  +M+PE IQ     Y   AD+WSL
Sbjct: 130 NLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYA--ADIWSL 186

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 68.8 bits (169), Expect = 2e-14
 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++ G+ KL DFG A +L     K  T  GTP ++APE+I   GYD   D WSL
Sbjct: 123 NLLLDSNGYVKLVDFGFAKKLKSG-QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSL 178

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 69.0 bits (168), Expect = 2e-14
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 12/89 (13%)

Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
            + L+FL  + + HR    D            N+LL  +G  KL DFG   Q+T   +KR
Sbjct: 125 LQALEFLHANQVIHRDIKSD------------NVLLGMDGSVKLTDFGFCAQITPEQSKR 172

Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +T++GTP+WMAPEV+    Y    D+WSL
Sbjct: 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 68.2 bits (167), Expect = 2e-14
 Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 4/59 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWSL 177
           NIL++T G  KLADFG+A Q+ + + AK  +  G+P+WMAPEVI Q+ GY   AD+WSL
Sbjct: 132 NILVDTNGVVKLADFGMAKQVVEFSFAK--SFKGSPYWMAPEVIAQQGGYGLAADIWSL 188

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 68.6 bits (167), Expect = 3e-14
 Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 5/63 (7%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADM 174
           +N+LL      KL DFGV+ QL  T+ +RNT IGTP+WMAPEVI      +  YD  +D+
Sbjct: 140 QNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 199

Query: 175 WSL 177
           WSL
Sbjct: 200 WSL 202

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 68.2 bits (166), Expect = 4e-14
 Identities = 29/57 (50%), Positives = 38/57 (66%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL  +G  KL DFG   Q+T   +KR+T++GTP+WMAPEV+    Y    D+WSL
Sbjct: 145 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 201

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 67.4 bits (164), Expect = 6e-14
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +A+G+PP  D+HPMR +F+IP   PP+      ++  F +F+  CL K+P  R TA E+L
Sbjct: 194 LAKGEPPNSDMHPMRVLFLIPKNNPPTLTGE--FSKPFKEFIDACLNKDPSFRPTAKELL 251

Query: 61  NHEFI 65
            H+FI
Sbjct: 252 KHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 67.8 bits (165), Expect = 6e-14
 Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 1/76 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M EG+PPY + +P+RA+++I T   P  + P+  +P F DF++RCL  + E+R +A E+L
Sbjct: 208 MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELL 267

Query: 61  NHEFIQVS-PGGNIPP 75
            H F++++ P  ++ P
Sbjct: 268 QHPFLKLAKPLSSLTP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 67.4 bits (164), Expect = 7e-14
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK--PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
           +AE +PP  D+HPMRA+F++      PP  ++   W+  F +FV   L KNP++R TA  
Sbjct: 202 LAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAER 261

Query: 59  MLNHEF 64
           +L H F
Sbjct: 262 LLTHLF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 67.4 bits (164), Expect = 7e-14
 Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMW 175
           NIL   +G  KLADFGV+ + T T+ +R++ IGTP+WMAPEV+     ++  YD  AD+W
Sbjct: 133 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 192

Query: 176 SL 177
           SL
Sbjct: 193 SL 194

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 66.8 bits (164), Expect = 8e-14
 Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 6/68 (8%)

Query: 1   MAEGKPPYGDIH-PMRAIFMI--PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 57
           MA GKPP+ ++  PM A++ I    +PP     P+  + E  DF+ +CL ++P++R TA 
Sbjct: 196 MATGKPPWSELGNPMAALYKIGSSGEPPEI---PEHLSEEAKDFLRKCLRRDPKKRPTAD 252

Query: 58  EMLNHEFI 65
           E+L H F+
Sbjct: 253 ELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 67.4 bits (164), Expect = 8e-14
 Identities = 25/66 (37%), Positives = 42/66 (63%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MA+ +PP+ +++PMR +  I    PP+  +P  W+ EF DF+   L K+PE R +A+++L
Sbjct: 208 MAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLL 267

Query: 61  NHEFIQ 66
            H F+ 
Sbjct: 268 EHPFVS 273

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 5/67 (7%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKP--PPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
           MA GKPP+  +  + A+F I      PP    PD  + E  DF+ +CL ++P  R TA+E
Sbjct: 195 MATGKPPWSQLEGVAAVFKIGRSKELPPI---PDHLSDEAKDFILKCLQRDPSLRPTAAE 251

Query: 59  MLNHEFI 65
           +L H F+
Sbjct: 252 LLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 66.7 bits (162), Expect = 2e-13
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 12/89 (13%)

Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
            + L+FL  + + HR    D            NILL  +G  KL DFG   Q+T   +KR
Sbjct: 126 LQALEFLHSNQVIHRDIKSD------------NILLGMDGSVKLTDFGFCAQITPEQSKR 173

Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +T++GTP+WMAPEV+    Y    D+WSL
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 65.9 bits (160), Expect = 2e-13
 Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 1/76 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M EG+PPY + +P+RA+++I T   P  + P+  +  F DF++RCL  + E+R +A E+L
Sbjct: 209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268

Query: 61  NHEFIQVS-PGGNIPP 75
            H+F++++ P  ++ P
Sbjct: 269 QHQFLKIAKPLSSLTP 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 66.6 bits (162), Expect = 2e-13
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + KR +++GTP+WMAPEVI    Y    D+WSL
Sbjct: 147 SILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSL 203

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 66.2 bits (161), Expect = 2e-13
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL ++G  KL+DFG   Q++  + KR +++GTP+WMAPEVI  + Y    D+WSL
Sbjct: 148 SILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSL 204

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 65.5 bits (160), Expect = 3e-13
 Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MA G PPY D+   RA+ +IP   PP   E + ++    +FV+ CL + P+ER +A E+L
Sbjct: 195 MATGNPPYSDVDAFRAMMLIPKSKPPRL-EDNGYSKLLREFVAACLDEEPKERLSAEELL 253

Query: 61  NHEFIQ 66
             ++I+
Sbjct: 254 KSKWIK 259

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 64.9 bits (159), Expect = 4e-13
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 4/53 (7%)

Query: 14  MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
           M+AI   P    P     + ++PEF DF+S CL K+P++R +A+E+L H FI+
Sbjct: 212 MQAICDGPPPSLP----AEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIK 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 65.2 bits (159), Expect = 5e-13
 Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +AE KPP  +++ M A++ I     P+    + W+  F +FV  CL K P++R ++ E+L
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNDSPTL-SSNDWSDYFRNFVDSCLQKIPQDRPSSEELL 265

Query: 61  NHEFIQ 66
            H F+ 
Sbjct: 266 KHRFVL 271

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 64.8 bits (158), Expect = 8e-13
 Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL+N+ G  KL DFGV+GQL D+MA  N+ +GT  +M+PE +Q   Y   +D+WSL
Sbjct: 130 NILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYTVQSDIWSL 184

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 64.2 bits (157), Expect = 9e-13
 Identities = 23/57 (40%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI L+   + KL DFG+A  L    +   T +GTP++M+PE +  + YD  +D+WSL
Sbjct: 140 NIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSL 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 63.9 bits (156), Expect = 9e-13
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +GH  + DF +A ++T       +  GTP +MAPEV+   GY    D WSL
Sbjct: 130 NILLDEQGHVHITDFNIATKVTPD-TLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSL 185

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 64.0 bits (156), Expect = 9e-13
 Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 4/67 (5%)

Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           M R+I+    NIL+N+ G  KL DFGV+G+L +++A  +T +GT  +M+PE IQ   Y  
Sbjct: 126 MHRDIKP--SNILVNSRGQIKLCDFGVSGELINSIA--DTFVGTSTYMSPERIQGGKYTV 181

Query: 171 VADMWSL 177
            +D+WSL
Sbjct: 182 KSDVWSL 188

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSF---REPDVWTPEFIDFVSRCLVKNPEERATAS 57
           +A G  PY    PM+ + +     PPS     +   ++  F   +S CL K+P +R TA 
Sbjct: 200 LATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAE 259

Query: 58  EMLNHEFI 65
           E+L H+F 
Sbjct: 260 ELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 64.1 bits (156), Expect = 1e-12
 Identities = 30/60 (50%), Positives = 36/60 (60%), Gaps = 7/60 (11%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSL 177
           NILL   G  KLADFG A      ++  N+ +GTP+WMAPEVI    E  YD   D+WSL
Sbjct: 145 NILLTEPGTVKLADFGSAS----LVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 63.0 bits (154), Expect = 2e-12
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 1   MAEGKPPYGDIHPMRAIFMI----PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 56
           +  GKPP+   + +  + +I             +    + E  D + +CL K+P +R TA
Sbjct: 192 LLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTA 251

Query: 57  SEMLNHEFI 65
            E+L H + 
Sbjct: 252 EEILQHPWF 260

Length = 260

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 63.2 bits (153), Expect = 2e-12
 Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 1/76 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M EG+PPY + +P+RA+++I T   P  + P+  +  F DF++RCL  + + R +A E+L
Sbjct: 208 MVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELL 267

Query: 61  NHEFIQVS-PGGNIPP 75
            H F++++ P  ++ P
Sbjct: 268 QHPFLKLAKPLSSLTP 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 64.0 bits (156), Expect = 2e-12
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N L++  GH KL DFG++      +   N+V+G+P +MAPEV++  GYD   D WSL
Sbjct: 131 NFLIDASGHIKLTDFGLS---KGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSL 184

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 3/57 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ EGH KL DFG A +L D   +  T+ GTP ++APEVIQ  G++   D W+L
Sbjct: 131 NILLDKEGHIKLTDFGFAKKLRD---RTWTLCGTPEYLAPEVIQSKGHNKAVDWWAL 184

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL      K+ D G++  L   MAK  T IGTP +MAPEV +   Y   +D+WSL
Sbjct: 133 NILLVANDLVKIGDLGISKVLKKNMAK--TQIGTPHYMAPEVWKGRPYSYKSDIWSL 187

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 62.4 bits (152), Expect = 4e-12
 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 7/62 (11%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTV-IGTPFWMAPEVI----QEIGYDCVADMW 175
           N+L+N  G  KL DFG++G L D++AK  T+  G   +MAPE I     + GYD  +D+W
Sbjct: 134 NVLINRNGQVKLCDFGISGYLVDSVAK--TIDAGCKPYMAPERINPELNQKGYDVKSDVW 191

Query: 176 SL 177
           SL
Sbjct: 192 SL 193

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|152065 pfam11629, Mst1_SARAH, C terminal SARAH domain of Mst1

 Score = 57.7 bits (140), Expect = 4e-12
 Identities = 21/33 (63%), Positives = 28/33 (84%)

Query: 88  DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRR 120
           DFEFLK LS ++L+ R+A+LD EME EIE+LR+
Sbjct: 1   DFEFLKSLSVEELEQRLASLDPEMETEIEELRQ 33

This family of proteins represents the C terminal SARAH domain of Mst1. SARAH controls apoptosis and cell cycle arrest via the Ras, RASSF, MST pathway. The Mst1 SARAH domain interacts with Rassf1 and Rassf5 by forming a heterodimer which mediates the apoptosis process. Length = 49

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 62.0 bits (150), Expect = 6e-12
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK--PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
           +AE +PP  D+HPMRA+F++      PP  ++   W+  F  FV   L KNP++R TA +
Sbjct: 202 LAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEK 261

Query: 59  MLNHEF 64
           +L H F
Sbjct: 262 LLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 61.2 bits (148), Expect = 9e-12
 Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +A+G+PP+ ++HPM+ +F+IP   PP+      ++    +FV  CL K P  R TA E+L
Sbjct: 194 LAKGEPPHSELHPMKVLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELL 251

Query: 61  NHEFI 65
            H+FI
Sbjct: 252 KHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 61.6 bits (149), Expect = 9e-12
 Identities = 25/57 (43%), Positives = 39/57 (68%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + +R +++GTP+WMAPE+I  + Y    D+WSL
Sbjct: 146 SILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSL 202

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 60.4 bits (146), Expect = 2e-11
 Identities = 25/65 (38%), Positives = 39/65 (60%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M +G+PPY    P++A+  +   PPP  +     +P   DF+ R L + P+ERATA E+L
Sbjct: 210 MVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELL 269

Query: 61  NHEFI 65
           +H F+
Sbjct: 270 DHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 60.4 bits (146), Expect = 2e-11
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 3/68 (4%)

Query: 111 MEREIEQLRRNILLNTEGH-AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD 169
           + R+I+   +NI L+  G  AKL DFG+A QL D+M    T +GTP++++PE+ Q   Y+
Sbjct: 123 LHRDIKS--QNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYN 180

Query: 170 CVADMWSL 177
              D+WSL
Sbjct: 181 NKTDIWSL 188

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 60.6 bits (148), Expect = 2e-11
 Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 5/58 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+++G+ K+ DFG A ++   T     T+ GTP ++APE+I   GY    D W+L
Sbjct: 131 NLLLDSDGYIKITDFGFAKRVKGRTY----TLCGTPEYLAPEIILSKGYGKAVDWWAL 184

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 60.4 bits (146), Expect = 2e-11
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)

Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 113 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 162

Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 163 VGTRSYMSPERLQGTHYSVQSDIWSM 188

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 59.8 bits (145), Expect = 3e-11
 Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL ++ G+ KL DFG + +L    +      +V GTP+WM+PEVI   GY   AD+WS+
Sbjct: 134 NILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSV 193

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 60.0 bits (146), Expect = 3e-11
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 1   MAEGKPPYGDIHPMRAI-FMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           MA GK P+ ++     I F +     P   +    +PE  DF+ RCL  +P++R TASE+
Sbjct: 199 MATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASEL 258

Query: 60  LNHEFI 65
           L H F+
Sbjct: 259 LQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 10/73 (13%)

Query: 1   MAEGKPPYG--DIHPMRAIF----MIPTKPPPSFREP-DVWTPEFIDFVSRCLVKNPEER 53
           +A G+ PY   +  P   IF     I  +PPP  R P   ++P+F DFV+ CL+K+P ER
Sbjct: 192 LATGRFPYPPENDPPD-GIFELLQYIVNEPPP--RLPSGKFSPDFQDFVNLCLIKDPRER 248

Query: 54  ATASEMLNHEFIQ 66
            +  E+L H FI+
Sbjct: 249 PSYKELLEHPFIK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 59.9 bits (145), Expect = 4e-11
 Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L+NT G  KL DFGV+ QL +++AK  T +GT  +MAPE I    Y   +D+WSL
Sbjct: 125 NMLVNTRGQVKLCDFGVSTQLVNSIAK--TYVGTNAYMAPERISGEQYGIHSDVWSL 179

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 59.0 bits (143), Expect = 5e-11
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           + R+I+ L  NI L   G  KL DFG++  L    +   TV+GTP++M+PE+ Q + Y+ 
Sbjct: 123 LHRDIKTL--NIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNF 180

Query: 171 VADMWSL 177
            +D+W+L
Sbjct: 181 KSDIWAL 187

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 59.3 bits (144), Expect = 5e-11
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 4/60 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSL 177
           NILL+  G+ KL DFG++GQL D++AK       P+ MAPE I      GYD  +D+WSL
Sbjct: 138 NILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPY-MAPERIDPSARDGYDVRSDVWSL 196

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 59.7 bits (144), Expect = 5e-11
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)

Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           L+ L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 113 LRGLAYLREKHQI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 162

Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 163 VGTRSYMSPERLQGTHYSVQSDIWSM 188

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 59.3 bits (144), Expect = 6e-11
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 5/61 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI----QEIGYDCVADMWS 176
           NILL+  G+ KL DFG++G+L D+ AK  +  G   +MAPE I        YD  AD+WS
Sbjct: 145 NILLDASGNVKLCDFGISGRLVDSKAKTRSA-GCAAYMAPERIDPPDPNPKYDIRADVWS 203

Query: 177 L 177
           L
Sbjct: 204 L 204

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 59.3 bits (144), Expect = 7e-11
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++EGH K+ADFG+  +        +T  GTP ++APE++    Y    D W+L
Sbjct: 126 NVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWAL 182

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 58.4 bits (142), Expect = 9e-11
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)

Query: 121 NILLNTEGHAKLADFGV--------AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA 172
           NIL+++ GH KL DFG+           L D   +   ++GTP ++APEVI   G+    
Sbjct: 123 NILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTV 182

Query: 173 DMWSL 177
           D WSL
Sbjct: 183 DWWSL 187

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M   KPP+ +   M AIF I T+P  + + P   +P+  +F+ R  V+N ++R +A E+L
Sbjct: 200 MLTEKPPWAEFEAMAAIFKIATQPT-NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELL 258

Query: 61  NHEFI 65
            H F+
Sbjct: 259 RHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 57.3 bits (138), Expect = 2e-10
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M +G+PPY +  P++A+ MI    PP  +     +P    F+ R LV++P +RATA+E+L
Sbjct: 209 MVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 268

Query: 61  NHEFI-QVSPGGNIPP 75
            H F+ +  P   I P
Sbjct: 269 KHPFLAKAGPPSCIVP 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 58.3 bits (141), Expect = 2e-10
 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 12/86 (13%)

Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           L FL    + +R   LD            NILL+ EGH KLADFG+  +         T 
Sbjct: 109 LMFLHRHGVIYRDLKLD------------NILLDAEGHCKLADFGMCKEGILNGVTTTTF 156

Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
            GTP ++APE++QE+ Y    D W+L
Sbjct: 157 CGTPDYIAPEILQELEYGPSVDWWAL 182

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 57.6 bits (139), Expect = 2e-10
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MA GKPP   +  + A+F I        R PD ++   IDFV+ CL ++  ER +A ++L
Sbjct: 201 MATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLL 260

Query: 61  NHEFI 65
            H+F+
Sbjct: 261 RHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           + R+I+   +NI L  +G  KL DFG+A  L  T+    T IGTP++++PE+ +   Y+ 
Sbjct: 123 LHRDIKS--QNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNN 180

Query: 171 VADMWSL 177
            +D+W+L
Sbjct: 181 KSDIWAL 187

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 57.7 bits (139), Expect = 2e-10
 Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 9/72 (12%)

Query: 109 CEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QE 165
             + R+I+    NILL   G  KLADFG A + +      N+ +GTP+WMAPEVI    E
Sbjct: 141 NMIHRDIKA--GNILLTEPGQVKLADFGSASKSSPA----NSFVGTPYWMAPEVILAMDE 194

Query: 166 IGYDCVADMWSL 177
             YD   D+WSL
Sbjct: 195 GQYDGKVDVWSL 206

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           M R+I+    N+ +   G  KL D G+    +      ++++GTP++M+PE I E GY+ 
Sbjct: 128 MHRDIKP--ANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 185

Query: 171 VADMWSL 177
            +D+WSL
Sbjct: 186 KSDIWSL 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 57.4 bits (139), Expect = 3e-10
 Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 6/58 (10%)

Query: 13  PMRAIF----MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
           PM AIF     I  +PPP       ++ EF DFV +CL KNP+ERA   E+  H FI+
Sbjct: 236 PM-AIFELLDYIVNEPPPKL-PSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK 291

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 56.7 bits (137), Expect = 5e-10
 Identities = 26/57 (45%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ EGH KL DFG++ +  D   K  +  GT  +MAPEV+   G+   AD WS 
Sbjct: 128 NILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 184

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 56.8 bits (137), Expect = 5e-10
 Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 8/63 (12%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG------YDCVADM 174
           N+L+N  G  KL DFGV+G L  ++AK N  IG   +MAPE I+  G      Y   +D+
Sbjct: 133 NVLVNGNGQVKLCDFGVSGNLVASLAKTN--IGCQSYMAPERIKSGGPNQNPTYTVQSDV 190

Query: 175 WSL 177
           WSL
Sbjct: 191 WSL 193

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 29/86 (33%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDT-----------------------------MAKRNTV 151
           NIL++ +GH KLADFG+  ++                                  + N+ 
Sbjct: 131 NILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANST 190

Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GTP ++APEV++   Y    D WSL
Sbjct: 191 VGTPDYIAPEVLRGTPYGLECDWWSL 216

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 56.7 bits (137), Expect = 5e-10
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)

Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           L+FL    + +R   LD            N+LL+ +GH K+ADFG+  +  +   K +T 
Sbjct: 109 LQFLHKKGIIYRDLKLD------------NVLLDKDGHIKIADFGMCKENMNGEGKASTF 156

Query: 152 IGTPFWMAPEVIQEIGYDCVADMWS 176
            GTP ++APE+++   Y+   D WS
Sbjct: 157 CGTPDYIAPEILKGQKYNESVDWWS 181

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 56.3 bits (136), Expect = 6e-10
 Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQ-LTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSL 177
           NILL++EGH  L DFG++ + L +   +  +  GT  +MAPEVI+    G+D   D WSL
Sbjct: 135 NILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSL 194

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 56.6 bits (136), Expect = 6e-10
 Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 7/60 (11%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSL 177
           NILL+  G  KL DFG A      MA  N  +GTP+WMAPEVI    E  YD   D+WSL
Sbjct: 145 NILLSEPGLVKLGDFGSA----SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 56.4 bits (136), Expect = 7e-10
 Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 3/57 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +GH K+ DFG A ++ D   +  T+ GTP ++APEVIQ  G+    D W++
Sbjct: 148 NLLLDNKGHVKVTDFGFAKKVPD---RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTM 201

Length = 329

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 55.9 bits (134), Expect = 9e-10
 Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 7/60 (11%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSL 177
           NILL   G  KLADFG A   +      N+ +GTP+WMAPEVI    E  YD   D+WSL
Sbjct: 155 NILLTEPGQVKLADFGSASIASPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 210

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 55.2 bits (133), Expect = 1e-09
 Identities = 23/67 (34%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           + R+I+ L  N+ L+   + K+ D GVA  L+D     NT++GTP++++PE+ ++  Y+ 
Sbjct: 123 LHRDIKSL--NLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNE 180

Query: 171 VADMWSL 177
            +D+W+L
Sbjct: 181 KSDVWAL 187

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 29/129 (22%)

Query: 64  FIQVSPGGNIPP-----GPPGAPSGGGFCDF--EFLKFLSYDDLQHRMANLDCEMEREIE 116
           F++  PGG+I       GP   P    FC +  + L  ++Y        + +C + R+I+
Sbjct: 80  FMEFVPGGSISSILNRFGPLPEPV---FCKYTKQILDGVAY-------LHNNCVVHRDIK 129

Query: 117 QLRRNILLNTEGHAKLADFGVAGQLT--------DTMAKRNTVIGTPFWMAPEVIQEIGY 168
               N++L   G  KL DFG A +L           M K  ++ GTP+WMAPEVI E GY
Sbjct: 130 G--NNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLK--SMHGTPYWMAPEVINESGY 185

Query: 169 DCVADMWSL 177
              +D+WS+
Sbjct: 186 GRKSDIWSI 194

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 55.0 bits (132), Expect = 2e-09
 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           + R+I+   +NI L   G  KL DFG A  LT   A   T +GTP+++ PE+ + + Y+ 
Sbjct: 122 LHRDIKS--KNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNN 179

Query: 171 VADMWSL 177
            +D+WSL
Sbjct: 180 KSDIWSL 186

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 54.5 bits (131), Expect = 3e-09
 Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 6/63 (9%)

Query: 121 NILLNTEGHAKLADFGVAGQL------TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 174
           NIL++ +G  K++DFG++ +L      T T   R ++ G+ FWMAPEV+++  Y   AD+
Sbjct: 136 NILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADI 195

Query: 175 WSL 177
           WSL
Sbjct: 196 WSL 198

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 54.3 bits (130), Expect = 3e-09
 Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQL-TDTMAKRN--TVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL ++ G+ KL DFG + +L T  M+     +V GTP+WM+PEVI   GY   AD+WSL
Sbjct: 136 NILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSL 195

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 54.0 bits (130), Expect = 4e-09
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 4/61 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ--EIGYDCVADMWS 176
           N+L++ +G  K++DFG++ +  D     +  ++ G+ FWMAPEVI     GY    D+WS
Sbjct: 138 NLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWS 197

Query: 177 L 177
           L
Sbjct: 198 L 198

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 54.0 bits (128), Expect = 5e-09
 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 10/67 (14%)

Query: 121 NILLNTEGH-AKLADFGVAGQLTDTMAKR------NTVIGTPFWMAPEVIQEIG---YDC 170
           NILL+ +G   KL DFG+A  L D  +        +T +GTP +MAPEV+  +       
Sbjct: 131 NILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASS 190

Query: 171 VADMWSL 177
            +D+WSL
Sbjct: 191 SSDIWSL 197

Length = 384

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 53.5 bits (128), Expect = 6e-09
 Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +AE KPP  +++ M A++ I     P+ +  + WT  F  FV  CL K P+ER  ++E+L
Sbjct: 213 LAERKPPLFNMNAMSALYHIAQNDSPTLQSNE-WTDSFRGFVDYCLQKIPQERPASAELL 271

Query: 61  NHEFIQ 66
            H+F++
Sbjct: 272 RHDFVR 277

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 53.4 bits (128), Expect = 8e-09
 Identities = 24/57 (42%), Positives = 36/57 (63%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ EGH KLADFG+  +        +T  GTP ++APE++QE+ Y    D W++
Sbjct: 126 NVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAM 182

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 52.7 bits (126), Expect = 1e-08
 Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQL-TDTMAKR--NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL ++ G+ KL DFG + ++ T  M+     +V GTP+WM+PEVI   GY   AD+WS+
Sbjct: 136 NILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSV 195

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 52.7 bits (126), Expect = 1e-08
 Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 5/61 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNT----VIGTPFWMAPEVIQEIGYDCVADMWS 176
           NIL ++ G+ KL DFG + +L  T+    T    V GTP+WM+PEVI   GY   AD+WS
Sbjct: 136 NILRDSVGNVKLGDFGASKRL-QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWS 194

Query: 177 L 177
           +
Sbjct: 195 V 195

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 52.4 bits (126), Expect = 2e-08
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)

Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           L++L  + + +R   LD            N+LL+TEG  K+ADFG+  +      + +T 
Sbjct: 114 LQYLHENKIVYRDLKLD------------NLLLDTEGFVKIADFGLCKEGMGFGDRTSTF 161

Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
            GTP ++APEV+ E  Y    D W L
Sbjct: 162 CGTPEFLAPEVLTETSYTRAVDWWGL 187

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           M R+I+    N+ +   G  KL D G+    +      ++++GTP++M+PE I E GY+ 
Sbjct: 128 MHRDIKP--ANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 185

Query: 171 VADMWSL 177
            +D+WSL
Sbjct: 186 KSDIWSL 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 52.3 bits (125), Expect = 2e-08
 Identities = 25/57 (43%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+T+GH K+ADFG+  +     AK  T  GTP ++APE++    Y+   D WS 
Sbjct: 126 NILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSF 182

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 20/77 (25%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDT--------------------MAKRNTVIGTPFWMAP 160
           NILL+ + H K+ DFG A  L                         +  + +GT  +++P
Sbjct: 132 NILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSP 191

Query: 161 EVIQEIGYDCVADMWSL 177
           E++ E      +D+W+L
Sbjct: 192 ELLNEKPAGKSSDLWAL 208

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 23/57 (40%), Positives = 32/57 (56%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +GH KL DFG+  +        +T  GT  +MAPE++   G+    D WSL
Sbjct: 130 NILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSL 186

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 7/64 (10%)

Query: 121 NILLNTEGHAKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIG------YDCVAD 173
           N+L++  GH KLADFG A +LT + M      +GTP ++APEV+  +       Y    D
Sbjct: 132 NVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECD 191

Query: 174 MWSL 177
            WSL
Sbjct: 192 WWSL 195

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 7/64 (10%)

Query: 121 NILLNTEGHAKLADFGVAGQL---TDTMAKR-NTVIGTPFWMAPEVIQE---IGYDCVAD 173
           NI L+  G  KL DFG A +L   T TM +   ++ GTP +MAPEVI      G+   AD
Sbjct: 129 NIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAAD 188

Query: 174 MWSL 177
           +WSL
Sbjct: 189 IWSL 192

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 51.6 bits (123), Expect = 3e-08
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           M R+I+    N+ +   G  KL D G+    +      ++++GTP++M+PE I E GY+ 
Sbjct: 128 MHRDIKP--ANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 185

Query: 171 VADMWSL 177
            +D+WSL
Sbjct: 186 KSDIWSL 192

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 51.4 bits (123), Expect = 3e-08
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 8/77 (10%)

Query: 101 QHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAP 160
           Q R+   D + E        N+LL+ +G+ +++D G+A +L D  +K     GTP +MAP
Sbjct: 115 QRRIIYRDLKPE--------NVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAP 166

Query: 161 EVIQEIGYDCVADMWSL 177
           E++Q   YD   D ++L
Sbjct: 167 ELLQGEEYDFSVDYFAL 183

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 51.0 bits (123), Expect = 3e-08
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVA--GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RN L+      K++DFG++      D   KR        WMAPE +++  +   +D+WS
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWS 189

Length = 258

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 51.6 bits (123), Expect = 3e-08
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 9/85 (10%)

Query: 95  LSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVI 152
           L+ D++  R       M R+++    NI L   G  KL DFG + Q +D+++    ++  
Sbjct: 180 LALDEVHSR-----KMMHRDLKS--ANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFC 232

Query: 153 GTPFWMAPEVIQEIGYDCVADMWSL 177
           GTP+++APE+ +   Y   ADMWSL
Sbjct: 233 GTPYYLAPELWERKRYSKKADMWSL 257

Length = 478

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 51.2 bits (122), Expect = 4e-08
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +AE KPP  +++ M A++ I     P+ +  + W+  F +FV  CL K P++R T+ E+L
Sbjct: 217 LAERKPPLFNMNAMSALYHIAQNESPTLQSNE-WSDYFRNFVDSCLQKIPQDRPTSEELL 275

Query: 61  NHEFI 65
            H F+
Sbjct: 276 KHMFV 280

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 51.1 bits (122), Expect = 4e-08
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 7/60 (11%)

Query: 118 LRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           L+ N+L       K+ DFGV+  L  +     T  GTP++M+PE ++  GYD  +D+WSL
Sbjct: 139 LKNNLL-------KIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSL 191

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 51.2 bits (122), Expect = 5e-08
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 8/72 (11%)

Query: 4   GKPPYG---DIHPMRAIF----MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 56
           G+P  G   D  P  AIF     I  +PPP      V+TP+F +FV++CL+KNP ERA  
Sbjct: 237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN-GVFTPDFQEFVNKCLIKNPAERADL 295

Query: 57  SEMLNHEFIQVS 68
             ++NH FI+ S
Sbjct: 296 KMLMNHTFIKRS 307

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 50.6 bits (121), Expect = 6e-08
 Identities = 23/57 (40%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+++GH  L DFG+  +  +     +T  GTP ++APEV+++  YD   D W L
Sbjct: 126 NILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCL 182

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 50.4 bits (120), Expect = 7e-08
 Identities = 23/57 (40%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+++GH  L DFG+  +  +     +T  GTP ++APEV+++  YD   D W L
Sbjct: 126 NILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCL 182

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 49.9 bits (120), Expect = 9e-08
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           NIL+ ++G  K+ADFG+A   +  MA   +V+ T ++ APEV+ +  Y    DMWS
Sbjct: 137 NILVTSDGQVKIADFGLARIYSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWS 191

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 7/68 (10%)

Query: 2   AEGKPPYGDIHPMRAIFMIPTKPPPSFR-EPDV---WTPEFIDFVSRCLVKNPEERATAS 57
            EG+PP G   P+  +  I   P P  + EP     W+ EF DF+ +CL K+P  R T  
Sbjct: 205 PEGEPPLG---PIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPW 261

Query: 58  EMLNHEFI 65
           +ML H +I
Sbjct: 262 DMLEHPWI 269

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 1   MAEGKPPYGDIH-PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +A G+ PY     P + +  +  +P P     + ++PEF DFV++CL KN +ER    E+
Sbjct: 200 LATGRFPYDSWKTPFQQLKQVVEEPSPQLPA-EKFSPEFQDFVNKCLKKNYKERPNYPEL 258

Query: 60  LNHEFIQV 67
           L H F ++
Sbjct: 259 LQHPFFEL 266

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 49.7 bits (118), Expect = 1e-07
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +AE KPP  +++ M A++ I     P+  +   W+  F +FV  CL K P++R T+  +L
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPAL-QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265

Query: 61  NHEFIQ 66
            H F+ 
Sbjct: 266 KHRFVL 271

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 49.9 bits (119), Expect = 1e-07
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 19/93 (20%)

Query: 87  CDFEFL--KFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT 144
           C  +FL  K + Y DL+     LD            N++L+ +GH K+ADFG+  +    
Sbjct: 107 CGLQFLHSKGIIYRDLK-----LD------------NVMLDRDGHIKIADFGMCKENVFG 149

Query: 145 MAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
             + +T  GTP ++APE++Q + Y    D WS 
Sbjct: 150 DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSF 182

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 23/57 (40%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+++GH  L DFG+  +  +     +T  GTP ++APEV+ +  YD   D W L
Sbjct: 126 NILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCL 182

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NILL  +G  KL   G     T   +        P++MAPEVIQ   Y   AD++SL
Sbjct: 40  GNILLTWDGLLKL--DGSVAFKTPEQS-----RPDPYFMAPEVIQGQSYTEKADIYSL 90

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 49.3 bits (117), Expect = 2e-07
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 8/72 (11%)

Query: 4   GKP--PYG-DIHPMRAIF----MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 56
           G+P   YG D  P  AIF     I  +PPP      V+  EF DFV++CL+KNP ERA  
Sbjct: 235 GRPLSSYGPDSRPPMAIFELLDYIVNEPPPKL-PSGVFGAEFQDFVNKCLIKNPAERADL 293

Query: 57  SEMLNHEFIQVS 68
            +++ H FI+ S
Sbjct: 294 KQLMVHAFIKRS 305

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 24/57 (42%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+++GH  L DFG+  +         T  GTP ++APEVI++  YD   D W L
Sbjct: 126 NILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCL 182

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 24/57 (42%), Positives = 32/57 (56%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +GH  L DFG+         K NT  GTP ++APE++   GY    D W+L
Sbjct: 123 NILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTL 179

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+  G+ +++D G+A +L     K     GTP +MAPEV+Q   YD   D ++L
Sbjct: 125 NVLLDDHGNVRISDLGLAVELKGG-KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFAL 180

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (116), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 34/59 (57%), Gaps = 3/59 (5%)

Query: 121 NILLNTEGHAKLADFGVA-GQLTDTMAKRNTVIGTPFWMAPEV-IQEIGYDCVADMWSL 177
           NILL+  GH  L DFG++   LTD     NT  GT  ++APEV + E GY    D WSL
Sbjct: 126 NILLDATGHIALCDFGLSKANLTDN-KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSL 183

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++  GH KL DFG    L+    +    +GTP ++APE I  +G D ++D WSL
Sbjct: 127 NLLIDQTGHLKLTDFG----LSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSL 179

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 48.7 bits (117), Expect = 3e-07
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 25/112 (22%)

Query: 14  MRAIFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG 71
              +  +P KP     +  P   +PE ID + + LV +P++R TA E L H ++      
Sbjct: 240 RNYLKSLPKKPKKPLSKLFPGA-SPEAIDLLEKMLVFDPKKRITADEALAHPYLA---QL 295

Query: 72  NIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNIL 123
           + P   P A     F  F+                   + E   E+L+  I 
Sbjct: 296 HDPEDEPVAKPPFDFDFFD-------------------DDELTEEELKELIY 328

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 48.1 bits (114), Expect = 4e-07
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 7/78 (8%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M +G+PPY +  P++A+  I    PP  ++    +     F+   LV+ P +RATA E+L
Sbjct: 211 MIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELL 270

Query: 61  NHEFIQVSPGGNIPPGPP 78
            H F++++       GPP
Sbjct: 271 QHPFLKLA-------GPP 281

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 7/72 (9%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPE-------FIDFVSRCLVKNPEER 53
             + + PY +   + AI  I     P+    D    E       F DF+  C  + P+ R
Sbjct: 97  ALDYELPYNEERELSAILEILLNGMPADDPRDRSNLEGVSAARSFEDFMRLCASRLPQRR 156

Query: 54  ATASEMLNHEFI 65
             A+  L H   
Sbjct: 157 EAANHYLAHCRA 168

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 48.1 bits (114), Expect = 5e-07
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 125 NLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 181

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 47.5 bits (114), Expect = 6e-07
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSL 177
           RN L+  +   K++DFG++  + D    R    G  P  WMAPE +++  +   +D+WS 
Sbjct: 134 RNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSF 193

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 47.5 bits (113), Expect = 6e-07
 Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHA-KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +NILL+      K+ DFG++  L+ + +K  TV+GTP +++PE+ +   Y+  +D+W+L
Sbjct: 130 QNILLDKHKMVVKIGDFGISKILS-SKSKAYTVVGTPCYISPELCEGKPYNQKSDIWAL 187

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 47.5 bits (113), Expect = 7e-07
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 125 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 181

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 47.1 bits (112), Expect = 8e-07
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 5/69 (7%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK---PP-PSFREPDVWTPEFIDFVSRCLVKNPEERATA 56
           M  G+ P+ D   + A+F +  K   PP P     ++ +P  +DF++ C   NP+ R TA
Sbjct: 205 MFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL-SPVALDFLNACFTINPDNRPTA 263

Query: 57  SEMLNHEFI 65
            E+L H FI
Sbjct: 264 RELLQHPFI 272

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 47.5 bits (113), Expect = 8e-07
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 14  MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNI 73
           M AI M  ++PP +   P   + EF  F+S CL + P +R +A ++L H FI +      
Sbjct: 285 MCAICM--SQPPEA---PATASREFRHFISCCLQREPAKRWSAMQLLQHPFI-LRAQPGQ 338

Query: 74  PPGPPG 79
             G P 
Sbjct: 339 GQGGPN 344

Length = 353

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 8e-07
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 6/63 (9%)

Query: 121 NILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPFWMAPEVIQEIG-----YDCVADM 174
           N+LL+  GH +LADFG   +L  D   + N  +GTP +++PE++Q +      Y    D 
Sbjct: 132 NVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDW 191

Query: 175 WSL 177
           WSL
Sbjct: 192 WSL 194

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 47.5 bits (113), Expect = 8e-07
 Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPFWMAPEVIQEIGYDCV----ADMW 175
           N+LL+  GH KLADFG   ++  + M + +T +GTP +++PEV++  G D       D W
Sbjct: 172 NMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 231

Query: 176 SL 177
           S+
Sbjct: 232 SV 233

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 47.3 bits (112), Expect = 9e-07
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 125 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 181

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 47.3 bits (112), Expect = 9e-07
 Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIG----YDCVADMW 175
           N+LL+  GH KLADFG   ++  + M + +T +GTP +++PEV++  G    Y    D W
Sbjct: 172 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 231

Query: 176 SL 177
           S+
Sbjct: 232 SV 233

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 47.3 bits (112), Expect = 9e-07
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 126 NLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 182

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 47.1 bits (113), Expect = 9e-07
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 18  FMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 64
           F  P   P S  +  P+  +PE ID +   L  +P++R TAS+ L H +
Sbjct: 235 FRFPQFAPTSLHQLIPNA-SPEAIDLIKDMLRWDPKKRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 47.3 bits (112), Expect = 9e-07
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQEIG----YDCVADMW 175
           N+LL+  GH KLADFG   ++ +T M + +T +GTP +++PEV++  G    Y    D W
Sbjct: 172 NMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 231

Query: 176 SL 177
           S+
Sbjct: 232 SV 233

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER---ATAS 57
           M  GKPP+      + I+    K P  F  P+  +PE  D +S  L K+P +R     A 
Sbjct: 186 MLTGKPPF-YAEDRKEIYEKILKDPLRF--PEFLSPEARDLISGLLQKDPTKRLGSGGAE 242

Query: 58  EMLNHEF 64
           E+  H F
Sbjct: 243 EIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 47.2 bits (112), Expect = 1e-06
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%)

Query: 1   MAEGKPPY-------GDIHPMRAIFMIPTKPPPSFREPD-VWTPEFIDFVSRCLVKNPEE 52
           +A G+ PY       G + P++ +  I  + PP    P   ++ +F+ F+++C+ K P+E
Sbjct: 186 LALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPP--VLPVGQFSEKFVHFITQCMRKQPKE 243

Query: 53  RATASEMLNHEFIQVSPGGNI 73
           R     +++H FI     GN 
Sbjct: 244 RPAPENLMDHPFIVQYNDGNA 264

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 47.3 bits (112), Expect = 1e-06
 Identities = 23/57 (40%), Positives = 38/57 (66%), Gaps = 3/57 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G  K+ DFG A ++ DT  +  T+ GTP ++APE++  +G+   AD W+L
Sbjct: 161 NLLLDKDGFIKMTDFGFA-KVVDT--RTYTLCGTPEYIAPEILLNVGHGKAADWWTL 214

Length = 340

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 46.9 bits (111), Expect = 1e-06
 Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQ-LTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSL 177
           NILL++ GH  L DFG++ +   D + +  +  GT  +MAP++++  + G+D   D WS+
Sbjct: 135 NILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSM 194

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 23/100 (23%)

Query: 93  KFLSYDDLQHR----------MANLDCEMEREIEQLRRNILLNTEGH-AKLADFGVAGQL 141
            FL+ +DL             +A+ +C + R++    RN+LL T G   K+ DFG+A   
Sbjct: 136 SFLTLEDLLSFSYQVAKGMAFLASKNC-IHRDLAA--RNVLL-THGKIVKICDFGLA--- 188

Query: 142 TDTMAKRNTVI-GTPF----WMAPEVIQEIGYDCVADMWS 176
            D M   N V+ G       WMAPE I    Y   +D+WS
Sbjct: 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS 228

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 46.5 bits (110), Expect = 2e-06
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQ-LTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           N++L++EGH K+ADFG+  + + D +  R T  GTP ++APE+I    Y    D W+
Sbjct: 131 NVMLDSEGHIKIADFGMCKEHMVDGVTTR-TFCGTPDYIAPEIIAYQPYGKSVDWWA 186

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTP-FWMAPEVIQEIGYDCVADMWS 176
           RN L+      K++DFG++  L D     KR   +  P  WMAPE ++E  +   +D+WS
Sbjct: 131 RNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKL--PIRWMAPESLKEGKFTSKSDVWS 188

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
           NILL+  GH +++D G+A   +    K +  +GT  +MAPEV+Q+   YD  AD +SL
Sbjct: 127 NILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGTAYDSSADWFSL 182

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
           NILL+  GH +++D G+A   +    K +  +GT  +MAPEV+Q+ + YD  AD +SL
Sbjct: 127 NILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 182

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ EGH K+ADFG+  +         T  GTP ++APE+I    Y    D W+ 
Sbjct: 131 NVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAF 187

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGH-AKLADFGVAGQLTDTMAK----RNTVIGTPFWMAPEVIQEIGYDCVADMW 175
           N+L+++ G   ++ADFG A +L          +  ++GT  +MAPEV++   Y    D+W
Sbjct: 133 NLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVW 192

Query: 176 SL 177
           S+
Sbjct: 193 SV 194

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 45.6 bits (109), Expect = 3e-06
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN L+      K++DFG++  L D       V G      WMAPE ++E  +   +D+WS
Sbjct: 132 RNCLVGENLVVKISDFGLSRDLYDD--DYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWS 189

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 46.0 bits (109), Expect = 3e-06
 Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL + G  KL DFG +     T++     T  GTP+++APE+ +   Y   ADM+SL
Sbjct: 173 NILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSL 231

Length = 496

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 15/91 (16%)

Query: 90  EFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKR 148
           E LK+L  + + HR    D            N+L+NT  G  K++DFG + +L       
Sbjct: 119 EGLKYLHDNQIVHRDIKGD------------NVLVNTYSGVVKISDFGTSKRLAGINPCT 166

Query: 149 NTVIGTPFWMAPEVIQE--IGYDCVADMWSL 177
            T  GT  +MAPEVI +   GY   AD+WSL
Sbjct: 167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSL 197

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 45.7 bits (108), Expect = 3e-06
 Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 2/59 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQ-LTDTMAKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSL 177
           NILL++EGH  L DFG++ + L++   +  +  GT  +MAPE+I+ + G+    D WSL
Sbjct: 135 NILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSL 193

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH +++D G+A Q+ +    R  V GT  +MAPEVI    Y    D W L
Sbjct: 132 NILLDDRGHIRISDLGLAVQIPEGETVRGRV-GTVGYMAPEVINNEKYTFSPDWWGL 187

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 4e-06
 Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNT--VIGTPFWMAPEVI-QEIGYDCVADMWS 176
           NIL+N +G  KLADFG+A   T   +   T  VI T ++  PE++     Y    DMWS
Sbjct: 130 NILINNDGVLKLADFGLARPYTKRNSADYTNRVI-TLWYRPPELLLGATRYGPEVDMWS 187

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 38/95 (40%)

Query: 121 NILLNTEGHAKLADFG----------------VAGQLTDTMA----------------KR 148
           N+LL+ +GH KL+DFG                ++  L                     KR
Sbjct: 131 NLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKR 190

Query: 149 N------TVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N      + +GTP ++APEV  + GY+   D WSL
Sbjct: 191 NRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSL 225

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 44.8 bits (106), Expect = 6e-06
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ EGH KL D+G+  +        +T  GTP ++APE+++   Y    D W+L
Sbjct: 126 NVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 182

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 44.6 bits (105), Expect = 7e-06
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +N+ L      K+ D G+A  L +     +T+IGTP++M+PE+     Y+  +D+W+L
Sbjct: 131 QNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWAL 188

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 44.5 bits (105), Expect = 8e-06
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 24  PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 65
            PP+   P  ++ +  DFV++CL K P  R T +++L H ++
Sbjct: 226 DPPTL--PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWL 265

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 44.4 bits (105), Expect = 9e-06
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI----QEIGYD-CVADMW 175
           N+L+N+  + K+ADFGV+  L  TM   N+ +GT  +M+PE I        YD    D+W
Sbjct: 198 NLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIW 257

Query: 176 SL 177
           SL
Sbjct: 258 SL 259

Length = 353

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 56
           +A G+ PY      +  F + TK     PPS    + ++P+F  FV  CL K+  +R   
Sbjct: 211 LATGQFPY---KNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKY 267

Query: 57  SEMLNHEFIQ 66
            E+L H FI+
Sbjct: 268 RELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M  GK P+ D   ++AIF I     P    P   + E IDF+ +    +  +R TA+E+L
Sbjct: 205 MLTGKHPFPDCTQLQAIFKIGENASPEI--PSNISSEAIDFLEKTFEIDHNKRPTAAELL 262

Query: 61  NHEFI 65
            H F+
Sbjct: 263 KHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 43.2 bits (100), Expect = 2e-05
 Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 10/76 (13%)

Query: 1   MAEGKPPYGDIHPMRAIFMI----------PTKPPPSFREPDVWTPEFIDFVSRCLVKNP 50
           +  G PP+       A                  P S   P++ +    D + + L K+P
Sbjct: 204 LLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDP 263

Query: 51  EERATASEMLNHEFIQ 66
           + R ++S  L+H+ + 
Sbjct: 264 KNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 10/65 (15%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTV-IGTPFWMAPEVIQEI-------GYDCVA 172
           N+LL+  GH +LADFG   ++      +++V +GTP +++PE++Q +       G +C  
Sbjct: 132 NVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC-- 189

Query: 173 DMWSL 177
           D WSL
Sbjct: 190 DWWSL 194

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 21/57 (36%), Positives = 32/57 (56%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L++EGH K+ADFG+  +         T  GTP ++APE+I    Y    D W+ 
Sbjct: 131 NVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAF 187

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++EGH KL D+G+  +        +T  GTP ++APE+++   Y    D W+L
Sbjct: 126 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 182

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 20/57 (35%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +GH KL D+G+  +        +T  GTP ++APE+++   Y    D W+L
Sbjct: 126 NVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWAL 182

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 10/65 (15%)

Query: 121 NILLNTEGHAKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEI-------GYDCVA 172
           NIL++  GH +LADFG   +L  D   + +  +GTP +++PE++Q +       G +C  
Sbjct: 132 NILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPEC-- 189

Query: 173 DMWSL 177
           D WSL
Sbjct: 190 DWWSL 194

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 8/39 (20%)

Query: 32  DVWT--------PEFIDFVSRCLVKNPEERATASEMLNH 62
           D+W+        PE  D + + L K+PE+R +A E+L H
Sbjct: 176 DIWSLGVILYELPELKDLIRKMLQKDPEKRPSAKEILEH 214

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 42.9 bits (101), Expect = 3e-05
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH +++D G+A ++ +    R  V GT  +MAPEV++   Y    D W L
Sbjct: 132 NILLDDYGHIRISDLGLAVEIPEGETIRGRV-GTVGYMAPEVVKNERYTFSPDWWGL 187

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 93  KFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 152
           +FL   D  H     +C + R+++    NIL+ + G  KLADFG+A   +  MA    V+
Sbjct: 116 QFLRGLDFLH----ANCIVHRDLKP--ENILVTSGGQVKLADFGLARIYSCQMALTPVVV 169

Query: 153 GTPFWMAPEVIQEIGYDCVADMWS 176
            T ++ APEV+ +  Y    DMWS
Sbjct: 170 -TLWYRAPEVLLQSTYATPVDMWS 192

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 42.5 bits (101), Expect = 4e-05
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWS 176
           NIL+N +G  KLADFG+A      +      + T ++ APE++     Y    D+WS
Sbjct: 128 NILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWS 184

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG--TPF-WMAPEVIQEIGYDCVADMWS 176
           RN+L+ T  H K+ DFG+A +L D   K     G   P  WMA E I    Y   +D+WS
Sbjct: 138 RNVLVKTPQHVKITDFGLA-KLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWS 196

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.1 bits (99), Expect = 5e-05
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 7/62 (11%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTP-----FWMAPEVIQEIGYDCVADM 174
           RNIL+ +E   K+ DFG+   L     K    +  P     FW APE + E  +   +D+
Sbjct: 137 RNILVESENRVKIGDFGLTKVL--PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDV 194

Query: 175 WS 176
           WS
Sbjct: 195 WS 196

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH +++D G+A ++ +  + R  V GT  +MAPEV+    Y    D W L
Sbjct: 132 NILLDDYGHIRISDLGLAVKIPEGESIRGRV-GTVGYMAPEVLNNQRYTLSPDYWGL 187

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 41.9 bits (99), Expect = 6e-05
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 6   PPY-GDIHPMRAIFMIPTK----PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           P Y   +   R+    P        P  R    ++  F  FV  CL ++PE R +AS++L
Sbjct: 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTR---TFSEHFHQFVELCLQRDPESRPSASQLL 293

Query: 61  NHEF 64
           NH F
Sbjct: 294 NHSF 297

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 9/71 (12%)

Query: 4   GKPPYGDIHPMRAIF------MIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERAT 55
           G P   DI  +++ F       +P++P     E  P   + + +D + + LV NP +R T
Sbjct: 230 GPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKA-SDDALDLLKKLLVFNPNKRLT 288

Query: 56  ASEMLNHEFIQ 66
           A E L H ++ 
Sbjct: 289 AEEALEHPYVA 299

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 41.4 bits (97), Expect = 8e-05
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 1   MAEGKPPYG-DIHP--MRAIFMIP--TKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 55
           MA  KPP+  + H   +  IF I   T  P     P+  +P   D   RCL   PE+R  
Sbjct: 201 MATAKPPWNAEKHSNHLALIFKIASATTAPSI---PEHLSPGLRDVTLRCLELQPEDRPP 257

Query: 56  ASEMLNH 62
           + E+L H
Sbjct: 258 SRELLKH 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 41.5 bits (97), Expect = 9e-05
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH +++D G+A  + +    +  V GT  +MAPEV++   Y    D W+L
Sbjct: 132 NILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWAL 187

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 41.6 bits (97), Expect = 9e-05
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 35/92 (38%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMA-----------------------------KRN-- 149
           N+LL+++GH KL+DFG+   L                                  KRN  
Sbjct: 131 NLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRR 190

Query: 150 ----TVIGTPFWMAPEVIQEIGYDCVADMWSL 177
               + +GTP ++APEV  + GY+ + D WSL
Sbjct: 191 QLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKP--PPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
           M   KPP+ +   M AIF I T+P  P     P   +    DF+  C+      R +A E
Sbjct: 202 MLTEKPPWAEYEAMAAIFKIATQPTNPQL---PSHISEHARDFL-GCIFVEARHRPSAEE 257

Query: 59  MLNHEFIQV 67
           +L H F Q+
Sbjct: 258 LLRHPFAQL 266

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)

Query: 1   MAEGKPPYGDI-HPMRAIF---MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA 56
           MA GKPP+ ++  P  A+F   M    P      P+  + E  +F+ RC   +P++RA+A
Sbjct: 204 MATGKPPFIELGEPQAAMFKVGMFKIHPEI----PESLSAEAKNFILRCFEPDPDKRASA 259

Query: 57  SEMLNHEFI 65
            ++L   F+
Sbjct: 260 HDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 15/72 (20%)

Query: 121 NILLNTEGHAKLADFGVAG----QLTDTMAK----RNT-------VIGTPFWMAPEVIQE 165
           N+L+ + GH KL DFG++      LT  + +    ++T       V GTP ++APEVI  
Sbjct: 131 NLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR 190

Query: 166 IGYDCVADMWSL 177
            GY    D W++
Sbjct: 191 QGYGKPVDWWAM 202

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +NIL+ + G  KLADFG+A ++        +V+ T ++ APEV+ +  Y    D+WS+
Sbjct: 139 QNILVTSSGQIKLADFGLA-RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 195

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 7/65 (10%)

Query: 9   GDIHPMRAIF----MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML-NHE 63
           G   PM  I      I  +PPP     D +  +  DFV  CL+K+P ER T  ++     
Sbjct: 211 GQDDPM-GILDLLQQIVQEPPPRLPSSD-FPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268

Query: 64  FIQVS 68
           FIQ  
Sbjct: 269 FIQAL 273

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 9/72 (12%)

Query: 1   MAEGKPPYGDIHPMRAIF----MIPTKPPPSFREPD--VWTPEFIDFVSRCLVKNPEERA 54
           +A GK PY   +    +F     +    PP     +   ++P F++F++ CL+K+  +R 
Sbjct: 203 VATGKFPYPKWNS---VFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRP 259

Query: 55  TASEMLNHEFIQ 66
              E+L H FI+
Sbjct: 260 KYKELLEHPFIK 271

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 17  IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI 65
                       RE    +  P  +D + + L  +P++R +A + L HE+ 
Sbjct: 237 NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 26/73 (35%)

Query: 121 NILLNTEGHAKLADFGVA------------GQLTDTMAKRNTVIGTPFWM-APEVIQEIG 167
           NILLN++   KLADFG+A              LTD +A R        W  APE++  +G
Sbjct: 137 NILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATR--------WYRAPEIL--LG 186

Query: 168 ---YDCVADMWSL 177
              Y    DMWS+
Sbjct: 187 STRYTKGVDMWSV 199

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 18/67 (26%)

Query: 120 RNILLNTEGH-AKLADFGVAGQLTDTMAKRNTVIG----TPF-WMAPEVIQEIGYDCV-- 171
           RN+LL T+G  AK+ DFG+A    D M   N V+      P  WMAPE I    +DCV  
Sbjct: 241 RNVLL-TDGRVAKICDFGLA---RDIMNDSNYVVKGNARLPVKWMAPESI----FDCVYT 292

Query: 172 --ADMWS 176
             +D+WS
Sbjct: 293 VQSDVWS 299

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 35/92 (38%)

Query: 121 NILLNTEGHAKLADFGVAGQLT----------------------DTMAKRN--------- 149
           N+LL+ +GH KL+DFG+   L                       +  +KR          
Sbjct: 131 NLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRR 190

Query: 150 ----TVIGTPFWMAPEVIQEIGYDCVADMWSL 177
               + +GTP ++APEV  + GY+ + D WSL
Sbjct: 191 QLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSL 222

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 5/59 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G+ +L+D G+A +L D  T+ +R    GT  +MAPE+++E  Y    D +++
Sbjct: 125 NVLLDDQGNCRLSDLGLAVELKDGKTITQR---AGTNGYMAPEILKEEPYSYPVDWFAM 180

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 15/33 (45%), Positives = 23/33 (69%)

Query: 34  WTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
           ++P F  FV +CL +NP+ R +AS +LNH F +
Sbjct: 279 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 311

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWSL 177
           RNIL+N+    K++DFG++ +L D+ A   T  G  P  W APE I    +   +D+WS 
Sbjct: 135 RNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSF 194

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCVADMWSL 177
           N+LLN  G  K+ DFG+A +    +     ++ T ++ APE++     Y    DMWS+
Sbjct: 136 NLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSV 193

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 8/62 (12%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTV--IGTPFWMAPEVI---QEIGYDCVADMW 175
           N+L++ +G  K+ADFG+A +L      R     + T ++ APE++   ++  YD   D+W
Sbjct: 129 NLLISADGVLKIADFGLA-RLFSEEEPRLYSHQVATRWYRAPELLYGARK--YDPGVDLW 185

Query: 176 SL 177
           ++
Sbjct: 186 AV 187

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 43/99 (43%)

Query: 121 NILLNTEGHAKLADFGVAGQL----------------TDTM------------------- 145
           NIL++ +GH KL DFG+                     D+M                   
Sbjct: 131 NILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLER 190

Query: 146 -AKR-------NTVIGTPFWMAPEVIQEIGYDCVADMWS 176
             KR       ++++GTP ++APEV+   GY  + D WS
Sbjct: 191 RRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 229

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 5/57 (8%)

Query: 124 LNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPFWMAPEVI--QEIGYDCVADMWSL 177
           LN    AK+ DFG++  +  ++MA  ++ +GTP++ +PE++  +   YD  +DMW+L
Sbjct: 175 LNGRPIAKIGDFGLSKNIGIESMA--HSCVGTPYYWSPELLLHETKSYDDKSDMWAL 229

Length = 1021

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 38.6 bits (91), Expect = 7e-04
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +   K P+   + +     I     P    P  ++ E  + VS  L K+PEER + +++L
Sbjct: 196 LCTLKHPFEGENLLELALKILKGQYPPI--PSQYSSELRNLVSSLLQKDPEERPSIAQIL 253

Query: 61  NHEFI 65
              FI
Sbjct: 254 QSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 38.6 bits (90), Expect = 7e-04
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG---YDCVADMWS 176
           +N+L+NTEG  KLADFG+A      +      + T ++ APE++  +G   Y    D+WS
Sbjct: 129 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL--LGCKYYSTAVDIWS 186

Query: 177 L 177
           L
Sbjct: 187 L 187

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 38.6 bits (90), Expect = 8e-04
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           NI+L  +    + DFG+A Q     +K  +V+GT  +  PE+++   Y   AD+W+
Sbjct: 144 NIMLGEDDKVTITDFGLAKQKQPE-SKLTSVVGTILYSCPEIVKNEPYGEKADVWA 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 120 RNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
           RN+LL T+ +AK++DFG++  L   +   K  T    P  W APE +    +   +D+WS
Sbjct: 124 RNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWS 183

Query: 177 L 177
            
Sbjct: 184 F 184

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RN+L++ +  AK++DFG+A + +         +    W APE ++E  +   +D+WS
Sbjct: 131 RNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVK---WTAPEALREKKFSTKSDVWS 184

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 6/60 (10%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKR---NTVIGTPFWMAPE-VIQEIGYDCVADMWS 176
           NILLN +G  KLADFG+A +L ++   R   N VI T ++  PE ++ E  Y    D+WS
Sbjct: 146 NILLNNKGQIKLADFGLA-RLYNSEESRPYTNKVI-TLWYRPPELLLGEERYGPAIDVWS 203

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RNIL++ +G AK++DFG+A     +M   N+ +    W APE ++   +   +D+WS
Sbjct: 129 RNILVSEDGVAKVSDFGLAR--VGSMGVDNSKLPVK-WTAPEALKHKKFSSKSDVWS 182

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M   KPP+ +   M AIF I T+P      P V +    DF+ R  V+  + R +A E+L
Sbjct: 202 MLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHV-SDHCRDFLKRIFVE-AKLRPSADELL 259

Query: 61  NHEFIQ 66
            H F+ 
Sbjct: 260 RHTFVH 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTD------TMAKRNTVIGTPFWMAPEVIQEIGYDCVAD 173
           RNIL+ +E   K++DFG+A  L +            + I   FW APE ++   +   +D
Sbjct: 138 RNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPI---FWYAPECLRTSKFSSASD 194

Query: 174 MWS 176
           +WS
Sbjct: 195 VWS 197

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 15/65 (23%)

Query: 121 NILLNTEGHAKLADFGVA-------GQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVA 172
           N+L+NTEG  KLADFG+A          T  +  R       ++ APE++  + GY    
Sbjct: 128 NLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTR-------WYRAPELLLGDKGYSTPV 180

Query: 173 DMWSL 177
           D+WS+
Sbjct: 181 DIWSV 185

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 10/31 (32%), Positives = 21/31 (67%)

Query: 34  WTPEFIDFVSRCLVKNPEERATASEMLNHEF 64
            +   +D   +CL  +P++R ++S++L+HEF
Sbjct: 255 LSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 8/62 (12%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI-GTPF----WMAPEVIQEIGYDCVADM 174
           RN+LL      K+ DFG+A    D M   N V  G+ F    WMAPE I +  Y  ++D+
Sbjct: 266 RNVLLAQGKIVKICDFGLA---RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDV 322

Query: 175 WS 176
           WS
Sbjct: 323 WS 324

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 13/60 (21%)

Query: 24  PPPSFRE-----PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPP 78
           PP   ++      D    + +D + R L  NP +R TA + L H +    P     P PP
Sbjct: 243 PPTPLKQIFPAASD----DALDLLQRLLTLNPNKRITARQALEHPYFSNDP----APTPP 294

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG---YDCVADMWS 176
           N+L+ ++G  KLADFG+A        K    + T ++ APE++   G   Y    DMWS
Sbjct: 132 NLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELL--FGARHYGVGVDMWS 188

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
           RNILL+     K+ DFG+A  +  D    R      P  WMAPE I +  Y   +D+WS
Sbjct: 202 RNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWS 260

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RNIL+N+    K++DFG++  L D      T  G      W APE I    +   +D+WS
Sbjct: 136 RNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWS 195

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 36.9 bits (86), Expect = 0.002
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNT-VIGTPFWMAPEV-IQEIGYDCVADMWSL 177
           NIL++  G  KL DFG A  L    A   T  + T ++ APE+ + +  Y    D+W++
Sbjct: 130 NILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAI 188

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWS 176
           RN+L+ T  H K+ DFG+A  L     + +   G  P  WMA E I    Y   +D+WS
Sbjct: 138 RNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 196

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RN+L++ +  AK++DFG+  + + T   ++T      W APE ++E  +   +D+WS
Sbjct: 131 RNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALREKKFSTKSDVWS 184

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 36.7 bits (86), Expect = 0.003
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 36  PEFIDFVSRCLVKNPEERATASEMLNHEFI 65
           PE ID +S+ L  NP +R +A E L H + 
Sbjct: 253 PEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RNIL+N+    K++DFG++  L D      T  G      W APE I    +   +D+WS
Sbjct: 135 RNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS 194

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG---YDCVADMWS 176
           N+LL  +G  K+ADFG+A             + T ++ APE++  +G   Y    DMW+
Sbjct: 138 NLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELL--LGCTTYTTAIDMWA 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 37.0 bits (86), Expect = 0.003
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 39  IDFVSRCLVKNPEERATASEMLNHEFIQVSP 69
           ID +   L  NP ER +A E L HE+ +  P
Sbjct: 290 IDLLQSLLKLNPLERISAKEALKHEYFKSDP 320

Length = 335

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN L++ +G  K++DFG++  + D   +  + +G+ F   W  PEV+    +   +D+W+
Sbjct: 129 RNCLVDDQGCVKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWA 186

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 47/104 (45%)

Query: 121 NILLNTEGHAKLADFGVA-----------------------------GQLTD----TMAK 147
           NIL++  GH KL+DFG++                                 D    TM+ 
Sbjct: 131 NILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSS 190

Query: 148 RNTV--------------IGTPFWMAPEVIQEIGYDCVADMWSL 177
           ++ +              +GTP ++APE+  + GY    D WSL
Sbjct: 191 KDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 36.8 bits (85), Expect = 0.003
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 120 RNILLNTEGHAKLADFGVAGQLT---DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RNILL      K+ DFG+A  +    + + K N  +    WMAPE I    Y   +D+WS
Sbjct: 243 RNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVK-WMAPESIFNCVYTFESDVWS 301

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
           RN+LL  + +AK++DFG++  L   D+  K  +    P  W APE I    +   +D+WS
Sbjct: 124 RNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWS 183

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWSL 177
           RNILL+     K+ DFG+A  +  D    R      P  WMAPE I +  Y   +D+WS 
Sbjct: 208 RNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 267

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	177
KOG0581|consensus	364		99.82
KOG0598|consensus	357		99.8
KOG0578|consensus	550		99.78
KOG0575|consensus	592		99.76
KOG0591|consensus	375		99.74
KOG0615|consensus	475		99.74
KOG0694|consensus	694		99.73
KOG0192|consensus	362		99.73
KOG0593|consensus	396		99.73
KOG0616|consensus	355		99.71
KOG0201|consensus	467		99.7
KOG0579|consensus	1187		99.7
KOG0595|consensus	429		99.69
KOG0594|consensus	323		99.69
KOG0582|consensus	516		99.68
KOG0583|consensus	370		99.68
KOG0661|consensus	538		99.68
KOG0663|consensus	419		99.67
KOG0658|consensus	364		99.66
KOG0600|consensus	560		99.66
KOG0574|consensus	502		99.65
KOG0603|consensus	612		99.64
KOG0599|consensus	411		99.64
KOG0659|consensus	318		99.64
KOG0577|consensus	948		99.63
KOG0197|consensus	468		99.63
KOG0660|consensus	359		99.63
KOG0589|consensus	426		99.63
KOG0033|consensus	355		99.63
KOG0592|consensus	604		99.62
KOG0198|consensus	313		99.61
KOG4721|consensus	904		99.61
KOG0588|consensus	786		99.6
KOG0614|consensus	732		99.58
KOG0690|consensus	516		99.57
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.57
KOG0984|consensus	282		99.57
KOG0605|consensus	550		99.56
KOG0597|consensus	808		99.56
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.56
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.55
KOG0667|consensus	586		99.55
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.55
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.54
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.54
KOG0695|consensus	593		99.54
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.54
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.54
KOG0986|consensus	591		99.54
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.54
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.54
KOG4279|consensus	1226		99.53
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.53
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.53
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.53
KOG0983|consensus	391		99.53
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.53
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.52
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.52
KOG0696|consensus	683		99.52
KOG1187|consensus	361		99.52
KOG0664|consensus	449		99.52
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.52
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.52
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.52
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.51
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.51
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.51
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.5
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.5
KOG1006|consensus	361		99.5
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.49
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.49
KOG4236|consensus	888		99.49
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.49
KOG0193|consensus	678		99.49
KOG0032|consensus	382		99.49
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.49
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.49
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.49
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.48
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.48
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.48
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.48
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.48
PHA02882	294	putative serine/threonine kinase; Provisional	99.48
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.47
PHA03212	391	serine/threonine kinase US3; Provisional	99.47
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.47
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.47
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.47
KOG4645|consensus	1509		99.47
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.47
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.47
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.46
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.46
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.46
KOG0585|consensus	576		99.46
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.46
PTZ00283	496	serine/threonine protein kinase; Provisional	99.46
PHA03210	501	serine/threonine kinase US3; Provisional	99.45
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.45
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.45
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.45
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.45
KOG0671|consensus	415		99.44
KOG0611|consensus	668		99.44
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.44
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.44
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.43
KOG1026|consensus	774		99.43
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.43
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.43
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.43
PTZ00267	478	NIMA-related protein kinase; Provisional	99.43
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.42
PTZ00036	440	glycogen synthase kinase; Provisional	99.42
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.41
PHA03211	461	serine/threonine kinase US3; Provisional	99.41
KOG0666|consensus	438		99.41
PHA03209	357	serine/threonine kinase US3; Provisional	99.41
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.41
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.41
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.4
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.4
PTZ00284	467	protein kinase; Provisional	99.39
PHA03207	392	serine/threonine kinase US3; Provisional	99.39
KOG0194|consensus	474		99.39
KOG0587|consensus	953		99.39
KOG0612|consensus	1317		99.39
KOG0662|consensus	292		99.38
KOG0604|consensus	400		99.37
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.37
KOG0665|consensus	369		99.37
KOG0580|consensus	281		99.36
KOG0669|consensus	376		99.36
KOG1035|consensus	1351		99.36
KOG0596|consensus	677		99.36
KOG1095|consensus	1025		99.36
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.35
PLN00181	793	protein SPA1-RELATED; Provisional	99.35
KOG0196|consensus	996		99.35
KOG0581|consensus	364		99.34
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.34
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.34
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.34
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.33
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.33
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.33
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.33
KOG0578|consensus	550		99.32
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.32
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.32
KOG0584|consensus	632		99.32
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.31
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.31
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.31
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.31
KOG4717|consensus	864		99.31
KOG0033|consensus	355		99.31
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.3
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.3
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.3
KOG0586|consensus	596		99.29
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.29
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.29
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.29
KOG0200|consensus	609		99.29
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.29
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.29
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.29
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.29
KOG0574|consensus	502		99.29
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.28
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.28
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.28
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.28
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.27
KOG1094|consensus	807		99.27
KOG0608|consensus	1034		99.27
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.27
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.27
KOG1989|consensus	738		99.27
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.26
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.26
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.26
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.26
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.26
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.26
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.25
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.25
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.25
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.25
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.25
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.25
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.24
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.24
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.24
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.24
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.24
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.24
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.24
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.24
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.24
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.24
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.23
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.23
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.23
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.23
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.23
PHA02988	283	hypothetical protein; Provisional	99.23
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.23
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.23
KOG0588|consensus	786		99.23
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.23
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.23
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.23
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.22
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.22
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.22
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.22
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.22
KOG0615|consensus	475		99.22
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.22
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.22
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.22
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.22
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.21
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.21
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.21
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.21
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.21
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.21
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.21
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.21
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.21
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.21
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.21
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.2
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.2
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.2
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.2
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.2
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.2
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.19
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.19
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.19
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.19
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.19
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.18
KOG4717|consensus	864		99.18
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.18
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.18
KOG1152|consensus	772		99.18
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.18
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.18
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.18
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.18
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.18
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.18
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.17
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.17
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.17
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.17
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.17
KOG4250|consensus	732		99.17
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.17
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.17
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.17
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.16
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.16
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.16
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.16
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.16
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.16
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.16
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.16
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.16
KOG0201|consensus	467		99.16
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.16
KOG0575|consensus	592		99.16
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.15
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.15
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.15
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.15
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.15
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.15
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.15
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.15
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.15
KOG1151|consensus	775		99.15
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.15
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.14
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.14
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.14
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.14
KOG4257|consensus	974		99.14
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.14
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.14
KOG0610|consensus	459		99.14
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.14
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.14
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.14
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.14
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.14
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.13
KOG0670|consensus	752		99.13
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.13
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.13
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.13
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.13
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.13
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.13
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.13
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.12
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.12
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.12
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.12
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.12
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.12
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.12
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.12
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.12
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.11
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.11
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.11
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.11
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.11
KOG0198|consensus	313		99.11
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.11
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.11
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.1
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.1
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.1
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.1
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.1
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.1
KOG0199|consensus	1039		99.1
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.1
PLN00009	294	cyclin-dependent kinase A; Provisional	99.1
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.1
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.1
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.1
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.1
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.1
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.09
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.09
KOG0576|consensus	829		99.09
KOG0592|consensus	604		99.09
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.09
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.09
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.09
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.08
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.08
KOG1025|consensus	1177		99.08
KOG0579|consensus	1187		99.08
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.08
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.07
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.07
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.07
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.07
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.07
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.07
KOG1027|consensus	903		99.07
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.06
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.06
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.06
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.06
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.06
KOG4278|consensus	1157		99.05
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.05
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.05
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.05
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.05
KOG3653|consensus	534		99.05
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.05
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.05
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.05
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.04
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.04
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.04
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.03
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.03
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.03
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.03
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.02
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.02
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.02
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.01
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.01
KOG0607|consensus	463		99.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.99
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.99
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.99
KOG2345|consensus	302		98.98
KOG0032|consensus	382		98.98
KOG0604|consensus	400		98.98
KOG0583|consensus	370		98.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.97
KOG0610|consensus	459		98.96
KOG0582|consensus	516		98.96
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.96
KOG0983|consensus	391		98.95
KOG0599|consensus	411		98.95
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.94
KOG0576|consensus	829		98.93
KOG2052|consensus	513		98.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.91
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.89
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.88
KOG0580|consensus	281		98.88
KOG0587|consensus	953		98.87
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.87
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.86
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.86
KOG0590|consensus	601		98.86
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.84
KOG4279|consensus	1226		98.82
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.82
KOG0606|consensus	1205		98.81
KOG1033|consensus	516		98.81
KOG0616|consensus	355		98.8
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.8
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.8
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.79
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.78
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.76
KOG0598|consensus	357		98.75
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.74
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.74
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.73
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.73
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.72
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.72
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.72
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.72
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.71
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.71
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.71
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.71
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.71
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.7
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.7
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.7
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.7
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.7
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.69
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.68
PRK09188	365	serine/threonine protein kinase; Provisional	98.68
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.67
KOG0605|consensus	550		98.67
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.67
PTZ00036	440	glycogen synthase kinase; Provisional	98.66
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.66
KOG0577|consensus	948		98.66
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.65
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.65
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.65
KOG0668|consensus	338		98.64
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.64
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.63
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.63
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.63
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.63
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.62
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.62
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.62
KOG0603|consensus	612		98.61
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.61
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.61
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.61
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.61
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.61
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.61
KOG0585|consensus	576		98.61
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.6
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.6
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.6
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.6
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.59
KOG4645|consensus	1509		98.59
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.59
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.59
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.58
KOG1167|consensus	418		98.58
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.58
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.58
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.57
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.57
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.57
KOG1024|consensus	563		98.57
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.56
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.56
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.56

>KOG0581|consensus

Probab=99.82  E-value=2.6e-21  Score=140.64  Aligned_cols=77  Identities=36%  Similarity=0.648  Sum_probs=69.6

Q ss_pred             chHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      .+..++.|+|. ..++|||+|            |+|+|++..|.+|+||||+++.+.+.  ...+++||..|||||.+.+
T Consensus       186 ~VL~GL~YLh~~~~IIHRDIK------------PsNlLvNskGeVKicDFGVS~~lvnS--~a~tfvGT~~YMsPERi~g  251 (364)
T KOG0581|consen  186 AVLRGLSYLHEERKIIHRDIK------------PSNLLVNSKGEVKICDFGVSGILVNS--IANTFVGTSAYMSPERISG  251 (364)
T ss_pred             HHHHHHHHHhhccCeeeccCC------------HHHeeeccCCCEEeccccccHHhhhh--hcccccccccccChhhhcC
Confidence            34677789995 899999999            77999999999999999999988765  5678999999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       252 ~~Ys~~sDIWSL  263 (364)
T KOG0581|consen  252 ESYSVKSDIWSL  263 (364)
T ss_pred             CcCCcccceecc
Confidence            999999999997

>KOG0598|consensus

Probab=99.80  E-value=8.6e-21  Score=137.82  Aligned_cols=77  Identities=38%  Similarity=0.584  Sum_probs=69.5

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..++.++|..+++|||+|            |+||+++.+|+++++|||+++..........+.|||+.|||||++...+|
T Consensus       135 ~lAL~~LH~~gIiyRDlK------------PENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy  202 (357)
T KOG0598|consen  135 VLALGYLHSKGIIYRDLK------------PENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGY  202 (357)
T ss_pred             HHHHHHHHhCCeeeccCC------------HHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCC
Confidence            456779999999999999            77999999999999999999976555556677999999999999999999


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +..+|+||+
T Consensus       203 ~~~vDWWsL  211 (357)
T KOG0598|consen  203 DKAVDWWSL  211 (357)
T ss_pred             CcccchHhH
Confidence            999999996

>KOG0578|consensus

Probab=99.78  E-value=6.6e-20  Score=139.41  Aligned_cols=77  Identities=45%  Similarity=0.827  Sum_probs=71.8

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..+++++|..+++|+|++.+            ||++..+|.+|++|||+|..+......+.+.+||++|||||++....|
T Consensus       379 l~aL~fLH~~gIiHrDIKSD------------nILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~Y  446 (550)
T KOG0578|consen  379 LQGLKFLHARGIIHRDIKSD------------NILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPY  446 (550)
T ss_pred             HHHHHHHHhcceeeeccccc------------eeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhccc
Confidence            67888999999999999966            999999999999999999988877667888999999999999999999


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      ++++|||||
T Consensus       447 G~KVDIWSL  455 (550)
T KOG0578|consen  447 GPKVDIWSL  455 (550)
T ss_pred             Cccccchhh
Confidence            999999996

>KOG0575|consensus

Probab=99.76  E-value=1.9e-19  Score=137.97  Aligned_cols=80  Identities=38%  Similarity=0.560  Sum_probs=74.2

Q ss_pred             cchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          86 FCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        86 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      .++.+++.|+|..+++|||++++            |++++.+.++||+|||||..+..+.+...+.|||+.|.|||++..
T Consensus       125 ~QIv~GlkYLH~~~IiHRDLKLG------------NlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k  192 (592)
T KOG0575|consen  125 RQIVEGLKYLHSLGIIHRDLKLG------------NLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNK  192 (592)
T ss_pred             HHHHHHHHHHHhcCceecccchh------------heeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhcc
Confidence            35678999999999999999977            999999999999999999998877778889999999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      .+++..+||||+
T Consensus       193 ~gHsfEvDiWSl  204 (592)
T KOG0575|consen  193 SGHSFEVDIWSL  204 (592)
T ss_pred             CCCCCchhhhhh
Confidence            899999999995

>KOG0591|consensus

Probab=99.74  E-value=1.4e-19  Score=127.86  Aligned_cols=131  Identities=25%  Similarity=0.389  Sum_probs=92.2

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC----------CCCCCCCC-----CCCCCCCC------cchHHHHh
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP----------GGNIPPGP-----PGAPSGGG------FCDFEFLK   93 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~----------~~~~~~~~-----~~~~~~~~------~~~~~~l~   93 (177)
                      ..+.+++++.|=...-.+.|.+-+...|.|.+...          .+.+....     ....-...      .+...++.
T Consensus        59 ~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~  138 (375)
T KOG0591|consen   59 AKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY  138 (375)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence            45667888877555556788888888877765432          11111000     00000000      11134455


Q ss_pred             hhch--hh--HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCCC
Q psy3254          94 FLSY--DD--LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD  169 (177)
Q Consensus        94 ~l~~--~~--~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~~  169 (177)
                      .+|.  ..  +.|||+|            |-||+++.+|.+|++|||+++.+........+++||++||+||++.+.+|+
T Consensus       139 ~cH~~~~r~~VmHRDIK------------PaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~  206 (375)
T KOG0591|consen  139 HCHSKIPRGTVMHRDIK------------PANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYN  206 (375)
T ss_pred             HHhccccccceeeccCc------------chheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCC
Confidence            5665  33  7899998            559999999999999999999988776666778999999999999999999


Q ss_pred             ccceEecC
Q psy3254         170 CVADMWSL  177 (177)
Q Consensus       170 ~~~Diws~  177 (177)
                      .+|||||+
T Consensus       207 ~kSDiWsl  214 (375)
T KOG0591|consen  207 FKSDIWSL  214 (375)
T ss_pred             cchhHHHH
Confidence            99999995

>KOG0615|consensus

Probab=99.74  E-value=7.2e-19  Score=129.64  Aligned_cols=78  Identities=35%  Similarity=0.551  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC---CCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      +...+++|+|.++++|||+|            |+|||++.+   ..+|++|||+|+.... .....++|||+.|.|||++
T Consensus       284 Qll~avkYLH~~GI~HRDiK------------PeNILl~~~~e~~llKItDFGlAK~~g~-~sfm~TlCGTpsYvAPEVl  350 (475)
T KOG0615|consen  284 QLLTAVKYLHSQGIIHRDIK------------PENILLSNDAEDCLLKITDFGLAKVSGE-GSFMKTLCGTPSYVAPEVL  350 (475)
T ss_pred             HHHHHHHHHHHcCcccccCC------------cceEEeccCCcceEEEecccchhhcccc-ceehhhhcCCccccChhhe
Confidence            34678889999999999999            779999876   6799999999998764 3456789999999999999


Q ss_pred             cCCC---CCccceEecC
Q psy3254         164 QEIG---YDCVADMWSL  177 (177)
Q Consensus       164 ~~~~---~~~~~Diws~  177 (177)
                      .+.+   |..++|+||+
T Consensus       351 ~~kg~~~~~~kVDiWSl  367 (475)
T KOG0615|consen  351 ASKGVEYYPSKVDIWSL  367 (475)
T ss_pred             ecCCeecccchheeeec
Confidence            8654   3448899996

>KOG0694|consensus

Probab=99.73  E-value=4.8e-19  Score=137.44  Aligned_cols=79  Identities=39%  Similarity=0.597  Sum_probs=71.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ++..+++|+|..+++.||+|++            ||+++.+|++||+|||+++.........++.|||+-|||||++.+.
T Consensus       476 ev~l~L~fLH~~~IIYRDlKLd------------NiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~  543 (694)
T KOG0694|consen  476 EVVLGLQFLHENGIIYRDLKLD------------NLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQ  543 (694)
T ss_pred             HHHHHHHHHHhcCceeeecchh------------heEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccC
Confidence            4467788999999999999977            9999999999999999999755444577889999999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|+|||
T Consensus       544 ~Yt~aVDWW~l  554 (694)
T KOG0694|consen  544 SYTRAVDWWGL  554 (694)
T ss_pred             cccchhhHHHH
Confidence            99999999986

>KOG0192|consensus

Probab=99.73  E-value=3e-19  Score=133.84  Aligned_cols=115  Identities=26%  Similarity=0.399  Sum_probs=85.3

Q ss_pred             HHhcccCCCCCCCHHhhhcCcccccCCCCCCCCCCCCCCCCCCcchHHHHhhhchhh-HHHHHhhhchHHHHHHHHhhcc
Q psy3254          43 SRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDD-LQHRMANLDCEMEREIEQLRRN  121 (177)
Q Consensus        43 ~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~i~~l~~n  121 (177)
                      ..|++.++..+.+..+++...     ....+   .........+....++.|+|... ++|+|+|            +.|
T Consensus       114 ~~~iVtEy~~~GsL~~~l~~~-----~~~~l---~~~~~l~~aldiArGm~YLH~~~~iIHrDLK------------~~N  173 (362)
T KOG0192|consen  114 SLCIVTEYMPGGSLSVLLHKK-----RKRKL---PLKVRLRIALDIARGMEYLHSEGPIIHRDLK------------SDN  173 (362)
T ss_pred             ceEEEEEeCCCCcHHHHHhhc-----ccCCC---CHHHHHHHHHHHHHHHHHHhcCCCeeecccC------------hhh
Confidence            457777888888888877543     00111   11111233345578899999999 9999999            669


Q ss_pred             eEeCCCC-CeEEeeeecccccccccCCCcccccccccccccccc--CCCCCccceEecC
Q psy3254         122 ILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSL  177 (177)
Q Consensus       122 il~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--~~~~~~~~Diws~  177 (177)
                      +|++.++ .+||+|||+++.........+...||+.|||||++.  ...|+.++|||||
T Consensus       174 iLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySF  232 (362)
T KOG0192|consen  174 ILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSF  232 (362)
T ss_pred             EEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhH
Confidence            9999997 999999999987654322333467999999999999  5689999999997

>KOG0593|consensus

Probab=99.73  E-value=7.8e-19  Score=125.23  Aligned_cols=83  Identities=25%  Similarity=0.432  Sum_probs=74.7

Q ss_pred             CCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          83 GGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        83 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ...++...+++++|..+++|||++            |+||++..+|.+|+||||+|+.+..++...+.++.|.||.|||.
T Consensus       105 ~~l~Q~l~ai~~cHk~n~IHRDIK------------PENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPEL  172 (396)
T KOG0593|consen  105 KYLYQLLKAIHFCHKNNCIHRDIK------------PENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPEL  172 (396)
T ss_pred             HHHHHHHHHhhhhhhcCeecccCC------------hhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhh
Confidence            444566889999999999999999            78999999999999999999998866677788999999999999


Q ss_pred             ccC-CCCCccceEecC
Q psy3254         163 IQE-IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~-~~~~~~~Diws~  177 (177)
                      +.+ ..|++.+||||+
T Consensus       173 LvGDtqYG~pVDiWAi  188 (396)
T KOG0593|consen  173 LVGDTQYGKPVDIWAI  188 (396)
T ss_pred             hcccCcCCCcccchhh
Confidence            987 789999999984

>KOG0616|consensus

Probab=99.71  E-value=1.4e-18  Score=123.37  Aligned_cols=75  Identities=37%  Similarity=0.643  Sum_probs=67.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      +..+++|+|..+++.||+|            |+||+++.+|.+|++|||.|+.+..   ..-+.|||+-|+|||++...+
T Consensus       153 ivlAleylH~~~iiYRDLK------------PENiLlD~~G~iKitDFGFAK~v~~---rT~TlCGTPeYLAPEii~sk~  217 (355)
T KOG0616|consen  153 IVLALEYLHSLDIIYRDLK------------PENLLLDQNGHIKITDFGFAKRVSG---RTWTLCGTPEYLAPEIIQSKG  217 (355)
T ss_pred             HHHHHHHHHhcCeeeccCC------------hHHeeeccCCcEEEEeccceEEecC---cEEEecCCccccChHHhhcCC
Confidence            3567789999999999999            8899999999999999999997654   356789999999999999999


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|+|||
T Consensus       218 ynkavDWWal  227 (355)
T KOG0616|consen  218 YNKAVDWWAL  227 (355)
T ss_pred             CCcchhHHHH
Confidence            9999999986

>KOG0201|consensus

Probab=99.70  E-value=3.4e-18  Score=126.83  Aligned_cols=78  Identities=55%  Similarity=0.925  Sum_probs=70.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.|+|.++.+|++++..            |+++..+|.++++|||++..+........+++||++|||||++....
T Consensus       120 ~l~~l~ylH~~~kiHrDIKaa------------nil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~  187 (467)
T KOG0201|consen  120 VLKGLDYLHSEKKIHRDIKAA------------NILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSG  187 (467)
T ss_pred             HHHHhhhhhhcceeccccccc------------ceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhcccc
Confidence            367788999999999999954            99999999999999999998877666678899999999999999889


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       188 Y~~KADIWSL  197 (467)
T KOG0201|consen  188 YDTKADIWSL  197 (467)
T ss_pred             ccchhhhhhh
Confidence            9999999996

>KOG0579|consensus

Probab=99.70  E-value=2.3e-18  Score=133.56  Aligned_cols=130  Identities=31%  Similarity=0.541  Sum_probs=94.3

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHhhhcCccccc--------CCCCCCCCC--------CCCCCCCCCcchHHHHhhhchhh
Q psy3254          36 PEFIDFVSRCLVKNPEERATASEMLNHEFIQV--------SPGGNIPPG--------PPGAPSGGGFCDFEFLKFLSYDD   99 (177)
Q Consensus        36 ~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~--------~~~~~~~~~--------~~~~~~~~~~~~~~~l~~l~~~~   99 (177)
                      .++.|++-..=..-..+.|.+-.++...|+..        +.++.+...        ...++...++..+++++|+|...
T Consensus        71 EELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~  150 (1187)
T KOG0579|consen   71 EELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN  150 (1187)
T ss_pred             hHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc
Confidence            45666654332233345777777776555543        333333211        11234455667789999999999


Q ss_pred             HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc-----CCCCCccceE
Q psy3254         100 LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADM  174 (177)
Q Consensus       100 ~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~-----~~~~~~~~Di  174 (177)
                      ++|+|++.+            ||++..+|.++++|||++.......+...+++||++|||||++.     ..+|++++||
T Consensus       151 iIHRDLKAG------------NiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDi  218 (1187)
T KOG0579|consen  151 IIHRDLKAG------------NILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADI  218 (1187)
T ss_pred             hhhhhcccc------------ceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhH
Confidence            999999955            99999999999999999876555555677899999999999884     5689999999


Q ss_pred             ecC
Q psy3254         175 WSL  177 (177)
Q Consensus       175 ws~  177 (177)
                      |||
T Consensus       219 WSl  221 (1187)
T KOG0579|consen  219 WSL  221 (1187)
T ss_pred             Hhh
Confidence            996

>KOG0595|consensus

Probab=99.69  E-value=1.8e-18  Score=127.27  Aligned_cols=77  Identities=42%  Similarity=0.639  Sum_probs=67.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC------CCeEEeeeecccccccccCCCccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE------GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE  161 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~------~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe  161 (177)
                      ...+++++|..+++|||+|            |+|||+...      -.+|++|||+||.+.+. ....+.||++.|||||
T Consensus       118 LA~alq~L~~~~IiHRDLK------------PQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~-~~a~tlcGSplYMAPE  184 (429)
T KOG0595|consen  118 LASALQFLHENNIIHRDLK------------PQNILLSTTARNDTSPVLKIADFGFARFLQPG-SMAETLCGSPLYMAPE  184 (429)
T ss_pred             HHHHHHHHHHCCeeeccCC------------cceEEeccCCCCCCCceEEecccchhhhCCch-hHHHHhhCCccccCHH
Confidence            3678889999999999999            779999765      45899999999987643 4566799999999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      ++..+.|+.|+|+||+
T Consensus       185 V~~~~~YdAKADLWSi  200 (429)
T KOG0595|consen  185 VIMSQQYDAKADLWSI  200 (429)
T ss_pred             HHHhccccchhhHHHH
Confidence            9999999999999984

>KOG0594|consensus

Probab=99.69  E-value=4.2e-18  Score=123.42  Aligned_cols=81  Identities=32%  Similarity=0.468  Sum_probs=70.8

Q ss_pred             CcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          85 GFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        85 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      .++...++.|+|..+++|||+|            |+|++++.+|.+|++|||+|+...-+....+..++|.+|.|||++.
T Consensus       126 m~Qll~gl~~~H~~~IlHRDLK------------PQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLl  193 (323)
T KOG0594|consen  126 MRQLLRGLAFLHSHGILHRDLK------------PQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLL  193 (323)
T ss_pred             HHHHHHHHHHHHhCCeecccCC------------cceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhc
Confidence            3456789999999999999999            7799999999999999999997765544456678999999999999


Q ss_pred             CC-CCCccceEecC
Q psy3254         165 EI-GYDCVADMWSL  177 (177)
Q Consensus       165 ~~-~~~~~~Diws~  177 (177)
                      +. .|+..+||||+
T Consensus       194 Gs~~Ys~~vDiWs~  207 (323)
T KOG0594|consen  194 GSTSYSTSVDIWSL  207 (323)
T ss_pred             CCCcCCCCcchHhH
Confidence            85 79999999985

>KOG0582|consensus

Probab=99.68  E-value=1.1e-17  Score=124.55  Aligned_cols=77  Identities=47%  Similarity=0.852  Sum_probs=65.1

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---C-cccccccccccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---R-NTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~-~~~~g~~~y~aPe~~~  164 (177)
                      .+++.|+|..+-+||++|            +.|||++.+|.++++|||++..+.+.+.+   . .+.+||++|||||++.
T Consensus       136 LkaL~YLH~~G~IHRdvK------------AgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~  203 (516)
T KOG0582|consen  136 LKALDYLHQNGHIHRDVK------------AGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLM  203 (516)
T ss_pred             HHHHHHHHhcCceecccc------------cccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhh
Confidence            677889999999999999            45999999999999999998766543322   2 5579999999999965


Q ss_pred             C--CCCCccceEecC
Q psy3254         165 E--IGYDCVADMWSL  177 (177)
Q Consensus       165 ~--~~~~~~~Diws~  177 (177)
                      .  .+|+.|+|||||
T Consensus       204 q~~~GYdfKaDIwSf  218 (516)
T KOG0582|consen  204 QQLHGYDFKADIWSF  218 (516)
T ss_pred             hcccCccchhhhhhh
Confidence            3  579999999997

>KOG0583|consensus

Probab=99.68  E-value=1.3e-17  Score=125.73  Aligned_cols=78  Identities=33%  Similarity=0.543  Sum_probs=67.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-CCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++|+|..+++|||+|            ++|++++.+ +.+|++|||++...........+.+||+.|+|||++.+.
T Consensus       129 lisav~y~H~~gi~HRDLK------------~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~  196 (370)
T KOG0583|consen  129 LISAVAYCHSRGIVHRDLK------------PENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGK  196 (370)
T ss_pred             HHHHHHHHHhCCEeeCCCC------------HHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCC
Confidence            3678889999999999999            779999999 999999999998764333456778999999999999987


Q ss_pred             C-CC-ccceEecC
Q psy3254         167 G-YD-CVADMWSL  177 (177)
Q Consensus       167 ~-~~-~~~Diws~  177 (177)
                      . |+ .++||||+
T Consensus       197 ~~Y~g~~aDvWS~  209 (370)
T KOG0583|consen  197 GTYSGKAADVWSL  209 (370)
T ss_pred             CCcCCchhhhhhh
Confidence            7 86 67999996

>KOG0661|consensus

Probab=99.68  E-value=2.2e-18  Score=129.09  Aligned_cols=86  Identities=24%  Similarity=0.371  Sum_probs=73.8

Q ss_pred             CCCCCCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccc
Q psy3254          79 GAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWM  158 (177)
Q Consensus        79 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~  158 (177)
                      ..++...++.+.++.++|..++.|||+|            |+||++.....+||+|||+||.+... ...+.++.|+||.
T Consensus       110 ~~irnim~QilqGL~hiHk~GfFHRDlK------------PENiLi~~~~~iKiaDFGLARev~Sk-pPYTeYVSTRWYR  176 (538)
T KOG0661|consen  110 SDIRNIMYQILQGLAHIHKHGFFHRDLK------------PENILISGNDVIKIADFGLAREVRSK-PPYTEYVSTRWYR  176 (538)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccCC------------hhheEecccceeEecccccccccccC-CCcchhhhccccc
Confidence            3455666778999999999999999999            88999998899999999999987643 3456789999999


Q ss_pred             ccccccC-CCCCccceEecC
Q psy3254         159 APEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~~-~~~~~~~Diws~  177 (177)
                      |||++.. +.|+.++|+||+
T Consensus       177 APEvLLrs~~Ys~pvD~wA~  196 (538)
T KOG0661|consen  177 APEVLLRSGYYSSPVDMWAV  196 (538)
T ss_pred             chHHhhhccccCCchHHHHH
Confidence            9999975 679999999985

>KOG0663|consensus

Probab=99.67  E-value=1e-17  Score=120.91  Aligned_cols=79  Identities=30%  Similarity=0.469  Sum_probs=71.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      +.+.+++++|...++|||+|            ++|+++...|.+|++|||+||.++.+....+..+.|.||.|||.+.+ 
T Consensus       185 QlL~glk~lH~~wilHRDLK------------~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~  252 (419)
T KOG0663|consen  185 QLLRGLKHLHDNWILHRDLK------------TSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGA  252 (419)
T ss_pred             HHHHHHHHHhhceeEecccc------------hhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCC
Confidence            44788889999999999999            67999999999999999999999888777777889999999999998 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|++++|+||+
T Consensus       253 ~tyst~iDMWSv  264 (419)
T KOG0663|consen  253 KTYSTAVDMWSV  264 (419)
T ss_pred             cccCcchhhhhH
Confidence            469999999995

>KOG0658|consensus

Probab=99.66  E-value=2.7e-17  Score=119.69  Aligned_cols=85  Identities=27%  Similarity=0.418  Sum_probs=72.4

Q ss_pred             CCCCCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-CCeEEeeeecccccccccCCCcccccccccc
Q psy3254          80 APSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWM  158 (177)
Q Consensus        80 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~  158 (177)
                      .++--.++.++++.|+|..+++|||+|            |.|+|++.+ |.+|+||||.|+.+... +....+..|..|.
T Consensus       126 ~iKLYt~Qlfrgl~yLh~~~IcHRDIK------------PqNlLvD~~tg~LKicDFGSAK~L~~~-epniSYicSRyYR  192 (364)
T KOG0658|consen  126 EIKLYTYQLFRGLAYLHSHGICHRDIK------------PQNLLVDPDTGVLKICDFGSAKVLVKG-EPNISYICSRYYR  192 (364)
T ss_pred             eeHHHHHHHHHHHHHHHhcCcccCCCC------------hheEEEcCCCCeEEeccCCcceeeccC-CCceeEEEecccc
Confidence            344456778999999999999999999            789999976 88999999999987654 3445678899999


Q ss_pred             ccccccC-CCCCccceEecC
Q psy3254         159 APEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~~-~~~~~~~Diws~  177 (177)
                      |||.+.+ ..|+.+.||||.
T Consensus       193 aPELifga~~Yt~~IDiWSa  212 (364)
T KOG0658|consen  193 APELIFGATEYTTSIDIWSA  212 (364)
T ss_pred             CHHHHcCccccCceeEEhhh
Confidence            9999987 569999999994

>KOG0600|consensus

Probab=99.66  E-value=3.3e-17  Score=123.60  Aligned_cols=80  Identities=29%  Similarity=0.440  Sum_probs=68.7

Q ss_pred             cchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCcccccccccccccccc
Q psy3254          86 FCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        86 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~  164 (177)
                      .+.+++++++|..++.|||+|            ..|||++.+|.+||+|||||+.+.... ...+..+.|+||.|||.++
T Consensus       225 kQLl~Gl~~cH~~gvlHRDIK------------~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLL  292 (560)
T KOG0600|consen  225 KQLLEGLEYCHSRGVLHRDIK------------GSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLL  292 (560)
T ss_pred             HHHHHHHHHHhhcCeeecccc------------ccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhc
Confidence            355788999999999999999            559999999999999999999765432 3356678899999999999


Q ss_pred             C-CCCCccceEecC
Q psy3254         165 E-IGYDCVADMWSL  177 (177)
Q Consensus       165 ~-~~~~~~~Diws~  177 (177)
                      + ..|+.++|+||.
T Consensus       293 G~t~Yg~aVDlWS~  306 (560)
T KOG0600|consen  293 GATSYGTAVDLWSV  306 (560)
T ss_pred             CCcccccceeehhh
Confidence            8 579999999984

>KOG0574|consensus

Probab=99.65  E-value=1.4e-17  Score=119.11  Aligned_cols=77  Identities=71%  Similarity=1.058  Sum_probs=70.6

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      +.+++|+|...-+||+++.+            ||+++.+|..|++|||++..+.+....+++.+||+.|||||++..-+|
T Consensus       139 LKGL~YLH~~~KIHRDIKAG------------NILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY  206 (502)
T KOG0574|consen  139 LKGLQYLHDLKKIHRDIKAG------------NILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGY  206 (502)
T ss_pred             HhHHHHHHHHHHHHhhcccc------------cEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhcc
Confidence            56777999999999999955            999999999999999999998887778889999999999999999899


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.++||||+
T Consensus       207 ~~~ADIWSL  215 (502)
T KOG0574|consen  207 DTKADIWSL  215 (502)
T ss_pred             chhhhHhhh
Confidence            999999996

>KOG0603|consensus

Probab=99.64  E-value=9.2e-17  Score=124.04  Aligned_cols=69  Identities=35%  Similarity=0.514  Sum_probs=59.5

Q ss_pred             hhchhhHHHHHhhhchHHHHHHHHhhcceEe-CCCCCeEEeeeecccccccccCCCccccccccccccccccCCCCCccc
Q psy3254          94 FLSYDDLQHRMANLDCEMEREIEQLRRNILL-NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA  172 (177)
Q Consensus        94 ~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~-~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~~~~~  172 (177)
                      ++|.++++|||++            |.||++ +..++++++|||.++.....   ..+.+-|..|.|||++....|+.++
T Consensus       430 ~LH~~gvvhRDLk------------p~NIL~~~~~g~lrltyFG~a~~~~~~---~~tp~~t~~y~APEvl~~~~yt~ac  494 (612)
T KOG0603|consen  430 YLHEQGVVHRDLK------------PGNILLDGSAGHLRLTYFGFWSELERS---CDTPALTLQYVAPEVLAIQEYTEAC  494 (612)
T ss_pred             HHHhcCeeecCCC------------hhheeecCCCCcEEEEEechhhhCchh---hcccchhhcccChhhhccCCCCcch
Confidence            8999999999999            669999 68899999999999876543   3344567889999999998999999


Q ss_pred             eEecC
Q psy3254         173 DMWSL  177 (177)
Q Consensus       173 Diws~  177 (177)
                      |||||
T Consensus       495 D~WSL  499 (612)
T KOG0603|consen  495 DWWSL  499 (612)
T ss_pred             hhHHH
Confidence            99996

>KOG0599|consensus

Probab=99.64  E-value=6.6e-17  Score=114.27  Aligned_cols=78  Identities=36%  Similarity=0.553  Sum_probs=67.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      ..++++.|+|...++|+|+|            |+||+++.+..++++|||.+..+... ......|||++|+|||.+.  
T Consensus       131 qlfegVeylHa~~IVHRDLK------------pENILlddn~~i~isDFGFa~~l~~G-ekLrelCGTPgYLAPEtikC~  197 (411)
T KOG0599|consen  131 QLFEGVEYLHARNIVHRDLK------------PENILLDDNMNIKISDFGFACQLEPG-EKLRELCGTPGYLAPETIKCS  197 (411)
T ss_pred             HHHHHHHHHHHhhhhhcccC------------hhheeeccccceEEeccceeeccCCc-hhHHHhcCCCcccChhheeee
Confidence            34788999999999999999            77999999999999999999887654 4556689999999999996  


Q ss_pred             ----CCCCCccceEecC
Q psy3254         165 ----EIGYDCVADMWSL  177 (177)
Q Consensus       165 ----~~~~~~~~Diws~  177 (177)
                          ..+|+..+|+||+
T Consensus       198 m~e~~pGYs~EVD~Wa~  214 (411)
T KOG0599|consen  198 MYENHPGYSKEVDEWAC  214 (411)
T ss_pred             cccCCCCccchhhHHHH
Confidence                2468999999984

>KOG0659|consensus

Probab=99.64  E-value=8.5e-17  Score=112.89  Aligned_cols=79  Identities=25%  Similarity=0.439  Sum_probs=68.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      +.+.++.|+|...+.|||+|            |.|++++.+|.+|++|||+++.+..+.......+.|.||.|||.+.+ 
T Consensus       109 m~LkGl~y~H~~~IlHRDlK------------PnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGs  176 (318)
T KOG0659|consen  109 MTLKGLAYCHSKWILHRDLK------------PNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGS  176 (318)
T ss_pred             HHHHHHHHHHhhhhhcccCC------------ccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccc
Confidence            34788899999999999999            66999999999999999999988766555455588999999999987 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+..+|+||.
T Consensus       177 r~Yg~~VDmWav  188 (318)
T KOG0659|consen  177 RQYGTGVDMWAV  188 (318)
T ss_pred             hhcCCcchhhhH
Confidence            579999999983

>KOG0577|consensus

Probab=99.63  E-value=1.5e-16  Score=122.56  Aligned_cols=74  Identities=46%  Similarity=0.750  Sum_probs=64.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      .+.++.|+|..+.+|+|++.+            ||++...|.+|++|||.+....+    .++++||++|||||++.   
T Consensus       135 aL~gLaYLHS~~~IHRDiKAG------------NILLse~g~VKLaDFGSAsi~~P----AnsFvGTPywMAPEVILAMD  198 (948)
T KOG0577|consen  135 ALQGLAYLHSHNRIHRDIKAG------------NILLSEPGLVKLADFGSASIMAP----ANSFVGTPYWMAPEVILAMD  198 (948)
T ss_pred             HHHHHHHHHHhhHHhhhcccc------------ceEecCCCeeeeccccchhhcCc----hhcccCCccccchhHheecc
Confidence            367888999999999999955            99999999999999999876543    35789999999999997   


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      .+.|+-++||||+
T Consensus       199 EGqYdgkvDvWSL  211 (948)
T KOG0577|consen  199 EGQYDGKVDVWSL  211 (948)
T ss_pred             ccccCCccceeec
Confidence            3679999999996

>KOG0197|consensus

Probab=99.63  E-value=4.9e-17  Score=123.09  Aligned_cols=81  Identities=26%  Similarity=0.353  Sum_probs=66.4

Q ss_pred             CcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccc
Q psy3254          85 GFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        85 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~  163 (177)
                      +.++.+++.||....++|||+.            .+|||++.+..+||+|||++|...+... .....--+..|.|||.+
T Consensus       309 a~qIaeGM~YLes~~~IHRDLA------------ARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~  376 (468)
T KOG0197|consen  309 AAQIAEGMAYLESKNYIHRDLA------------ARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEAL  376 (468)
T ss_pred             HHHHHHHHHHHHhCCccchhhh------------hhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHH
Confidence            4456899999999999999998            7799999999999999999996544321 11112235689999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      ..+.|+.+||||||
T Consensus       377 ~~~~FS~kSDVWSF  390 (468)
T KOG0197|consen  377 NYGKFSSKSDVWSF  390 (468)
T ss_pred             hhCCcccccceeeh
Confidence            99999999999997

>KOG0660|consensus

Probab=99.63  E-value=5.1e-17  Score=118.04  Aligned_cols=81  Identities=27%  Similarity=0.445  Sum_probs=69.0

Q ss_pred             CcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCcccccccccccccc
Q psy3254          85 GFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        85 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~  162 (177)
                      -++.+.+++|+|.++++|||+|            |.|++++.+...|++|||+||.....  ....+..+.|.||.|||+
T Consensus       131 ~YQiLrgLKyiHSAnViHRDLK------------PsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPEl  198 (359)
T KOG0660|consen  131 LYQILRGLKYIHSANVIHRDLK------------PSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPEL  198 (359)
T ss_pred             HHHHHHhcchhhcccccccccc------------hhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHH
Confidence            3456788999999999999999            67999999999999999999987542  223456789999999999


Q ss_pred             ccC-CCCCccceEecC
Q psy3254         163 IQE-IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~-~~~~~~~Diws~  177 (177)
                      +.. ..|+.++||||.
T Consensus       199 ll~~~~Yt~aiDiWSv  214 (359)
T KOG0660|consen  199 LLNSSEYTKAIDIWSV  214 (359)
T ss_pred             Hhccccccchhhhhhh
Confidence            975 679999999994

>KOG0589|consensus

Probab=99.63  E-value=8.1e-17  Score=121.26  Aligned_cols=77  Identities=35%  Similarity=0.660  Sum_probs=70.5

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..++.++|...++|||++            ..||++..++.++++|||+|+.+........+.+||+.||+||.+.+.+|
T Consensus       116 ~~av~ylH~~~iLHRDlK------------~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pY  183 (426)
T KOG0589|consen  116 LLAVNYLHENRVLHRDLK------------CANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPY  183 (426)
T ss_pred             HHHHHHHHhhhhhcccch------------hhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCC
Confidence            567789999999999999            55999999999999999999998877657778999999999999999999


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.|+|||||
T Consensus       184 n~KSDiWsL  192 (426)
T KOG0589|consen  184 NEKSDIWSL  192 (426)
T ss_pred             CccCcchhh
Confidence            999999996

>KOG0033|consensus

Probab=99.63  E-value=9.4e-17  Score=111.85  Aligned_cols=76  Identities=30%  Similarity=0.519  Sum_probs=66.1

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      +++++|+|..+++|||++            |+|+++..   ..-+|++|||++..+. .+.....++||+.|||||+++.
T Consensus       120 Leal~yCH~n~IvHRDvk------------P~nllLASK~~~A~vKL~~FGvAi~l~-~g~~~~G~~GtP~fmaPEvvrk  186 (355)
T KOG0033|consen  120 LEALAYCHSNGIVHRDLK------------PENLLLASKAKGAAVKLADFGLAIEVN-DGEAWHGFAGTPGYLSPEVLKK  186 (355)
T ss_pred             HHHHHHHHhcCceeccCC------------hhheeeeeccCCCceeecccceEEEeC-CccccccccCCCcccCHHHhhc
Confidence            677789999999999999            56999854   4469999999999887 4456677899999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      .+|+..+||||.
T Consensus       187 dpy~kpvDiW~c  198 (355)
T KOG0033|consen  187 DPYSKPVDIWAC  198 (355)
T ss_pred             CCCCCcchhhhh
Confidence            999999999984

>KOG0592|consensus

Probab=99.62  E-value=9.3e-17  Score=122.14  Aligned_cols=77  Identities=32%  Similarity=0.643  Sum_probs=66.9

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-----------CC--Cccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-----------AK--RNTVIGTP  155 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-----------~~--~~~~~g~~  155 (177)
                      ..+++|+|..+|+|||+|            |+|||++.+++++|+|||-|+.+....           ..  ...++||.
T Consensus       184 ldAleylH~~GIIHRDlK------------PENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTA  251 (604)
T KOG0592|consen  184 LDALEYLHSNGIIHRDLK------------PENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTA  251 (604)
T ss_pred             HHHHHHHHhcCceeccCC------------hhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeee
Confidence            577889999999999999            779999999999999999999774321           11  14589999


Q ss_pred             cccccccccCCCCCccceEecC
Q psy3254         156 FWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       156 ~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      .|.+||++..+..++.+|+|+|
T Consensus       252 eYVSPElL~~~~~~~~sDiWAl  273 (604)
T KOG0592|consen  252 EYVSPELLNDSPAGPSSDLWAL  273 (604)
T ss_pred             cccCHHHhcCCCCCcccchHHH
Confidence            9999999999999999999986

>KOG0198|consensus

Probab=99.61  E-value=2.4e-16  Score=115.44  Aligned_cols=81  Identities=38%  Similarity=0.508  Sum_probs=65.0

Q ss_pred             CcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeeccccccc---ccCCCcccccccccccc
Q psy3254          85 GFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTD---TMAKRNTVIGTPFWMAP  160 (177)
Q Consensus        85 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~---~~~~~~~~~g~~~y~aP  160 (177)
                      ..+..+++.|+|.++++|+|+|            +.|++++. ++.+|++|||+++....   .........||+.||||
T Consensus       123 tr~iL~GL~ylHs~g~vH~DiK------------~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maP  190 (313)
T KOG0198|consen  123 TRQILEGLAYLHSKGIVHCDIK------------PANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAP  190 (313)
T ss_pred             HHHHHHHHHHHHhCCEeccCcc------------cceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCc
Confidence            3456889999999999999999            56999999 79999999999987653   11223347899999999


Q ss_pred             ccccCC-CCCccceEecC
Q psy3254         161 EVIQEI-GYDCVADMWSL  177 (177)
Q Consensus       161 e~~~~~-~~~~~~Diws~  177 (177)
                      |++..+ ..+.++||||+
T Consensus       191 Evi~~g~~~~~~sDiWSl  208 (313)
T KOG0198|consen  191 EVIRNGEVARRESDIWSL  208 (313)
T ss_pred             hhhcCCCcCCccchhhhc
Confidence            999863 23358999996

>KOG4721|consensus

Probab=99.61  E-value=1.5e-16  Score=122.11  Aligned_cols=76  Identities=32%  Similarity=0.564  Sum_probs=66.5

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..+++|+|...++|||+|..            |||+..+..+||+|||-++...+. .....++||..|||||+++..+.
T Consensus       222 A~GM~YLH~hKIIHRDLKSP------------NiLIs~~d~VKIsDFGTS~e~~~~-STkMSFaGTVaWMAPEvIrnePc  288 (904)
T KOG4721|consen  222 AGGMNYLHLHKIIHRDLKSP------------NILISYDDVVKISDFGTSKELSDK-STKMSFAGTVAWMAPEVIRNEPC  288 (904)
T ss_pred             hhhhHHHHHhhHhhhccCCC------------ceEeeccceEEeccccchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCc
Confidence            56778999999999999955            999999999999999999866543 23345789999999999999999


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.|+|||||
T Consensus       289 sEKVDIwSf  297 (904)
T KOG4721|consen  289 SEKVDIWSF  297 (904)
T ss_pred             ccccceehh
Confidence            999999997

>KOG0588|consensus

Probab=99.60  E-value=2.5e-16  Score=122.39  Aligned_cols=78  Identities=29%  Similarity=0.473  Sum_probs=67.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ++..++.|+|..+++|+|++            |+|++++..+.+|++|||+|. +..+.....+.||++.|.|||++.+.
T Consensus       120 QIi~gv~yCH~~~icHRDLK------------pENlLLd~~~nIKIADFGMAs-Le~~gklLeTSCGSPHYA~PEIV~G~  186 (786)
T KOG0588|consen  120 QILDGVSYCHAFNICHRDLK------------PENLLLDVKNNIKIADFGMAS-LEVPGKLLETSCGSPHYAAPEIVSGR  186 (786)
T ss_pred             HHHHHHHHHhhhcceeccCC------------chhhhhhcccCEeeeccceee-cccCCccccccCCCcccCCchhhcCC
Confidence            34677889999999999999            779999999999999999995 34445667788999999999999999


Q ss_pred             CCC-ccceEecC
Q psy3254         167 GYD-CVADMWSL  177 (177)
Q Consensus       167 ~~~-~~~Diws~  177 (177)
                      +|. .++||||+
T Consensus       187 pYdG~~sDVWSC  198 (786)
T KOG0588|consen  187 PYDGRPSDVWSC  198 (786)
T ss_pred             CCCCCccccchh
Confidence            886 68999995

>KOG0614|consensus

Probab=99.58  E-value=3.1e-16  Score=118.88  Aligned_cols=82  Identities=34%  Similarity=0.511  Sum_probs=73.6

Q ss_pred             CCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          83 GGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        83 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ...-|+.+++.|+|..+++.||+|            |+|++++.+|.+|+.|||.|+.+... ...-++|||+.|.|||+
T Consensus       524 F~~acv~EAfeYLH~k~iIYRDLK------------PENllLd~~Gy~KLVDFGFAKki~~g-~KTwTFcGTpEYVAPEI  590 (732)
T KOG0614|consen  524 FYVACVLEAFEYLHRKGIIYRDLK------------PENLLLDNRGYLKLVDFGFAKKIGSG-RKTWTFCGTPEYVAPEI  590 (732)
T ss_pred             hhHHHHHHHHHHHHhcCceeccCC------------hhheeeccCCceEEeehhhHHHhccC-CceeeecCCcccccchh
Confidence            344578999999999999999999            78999999999999999999988765 44567899999999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +...+.+.++|.||+
T Consensus       591 ILnKGHD~avDyWaL  605 (732)
T KOG0614|consen  591 ILNKGHDRAVDYWAL  605 (732)
T ss_pred             hhccCcchhhHHHHH
Confidence            999999999999985

>KOG0690|consensus

Probab=99.57  E-value=6.8e-16  Score=111.63  Aligned_cols=77  Identities=31%  Similarity=0.583  Sum_probs=68.4

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..++.|+|..+++.+++++            +|++++.+|++|++|||+++.--..+....++|||+.|+|||++..+.|
T Consensus       278 vsAL~YLHs~~ivYRDlKL------------ENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDY  345 (516)
T KOG0690|consen  278 VSALGYLHSRNIVYRDLKL------------ENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDY  345 (516)
T ss_pred             HHHhhhhhhCCeeeeechh------------hhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccc
Confidence            5677899999999999994            4999999999999999999865445556778999999999999999999


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.++|+|.+
T Consensus       346 graVDWWG~  354 (516)
T KOG0690|consen  346 GRAVDWWGV  354 (516)
T ss_pred             cceeehhhh
Confidence            999999963

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.57  E-value=9.9e-16  Score=114.21  Aligned_cols=79  Identities=32%  Similarity=0.518  Sum_probs=67.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       103 qi~~~L~~lH~~~ivHrDlk------------p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  170 (323)
T cd05571         103 EIVSALGYLHSCDVVYRDLK------------LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN  170 (323)
T ss_pred             HHHHHHHHHHhCCeEeCCCC------------HHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCC
Confidence            44678899999999999999            669999999999999999997543332333456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++||||+
T Consensus       171 ~~~~~~DiwSl  181 (323)
T cd05571         171 DYGRAVDWWGL  181 (323)
T ss_pred             CCCccccCccc
Confidence            89999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0984|consensus

Probab=99.57  E-value=9.1e-16  Score=104.46  Aligned_cols=77  Identities=40%  Similarity=0.682  Sum_probs=61.5

Q ss_pred             hHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          88 DFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        88 ~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      +..++.++|.+ .++|||.|            |+|||++.+|.+|+||||++..+.+..... .-.|...|||||.+.. 
T Consensus       157 vv~al~~L~~kL~vIHRDvK------------PsNiLIn~~GqVKiCDFGIsG~L~dSiAkt-~daGCkpYmaPEri~~e  223 (282)
T KOG0984|consen  157 VVHALEFLHSKLSVIHRDVK------------PSNILINYDGQVKICDFGISGYLVDSIAKT-MDAGCKPYMAPERINPE  223 (282)
T ss_pred             HHHHHHHHHHHhhhhhccCC------------cceEEEccCCcEEEcccccceeehhhhHHH-HhcCCCccCChhhcCcc
Confidence            35666677654 68999999            679999999999999999998877653322 2457788999999952 


Q ss_pred             ---CCCCccceEecC
Q psy3254         166 ---IGYDCVADMWSL  177 (177)
Q Consensus       166 ---~~~~~~~Diws~  177 (177)
                         ..|+.++|||||
T Consensus       224 ~n~~gY~vksDvWSL  238 (282)
T KOG0984|consen  224 LNQKGYSVKSDVWSL  238 (282)
T ss_pred             cCcccceeehhhhhh
Confidence               379999999996

>KOG0605|consensus

Probab=99.56  E-value=5.8e-16  Score=117.62  Aligned_cols=77  Identities=32%  Similarity=0.567  Sum_probs=62.0

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccc---------------c---------
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTD---------------T---------  144 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~---------------~---------  144 (177)
                      .-++.-+|..+++|+|+|            |.|+|++..|++||+||||+..+..               .         
T Consensus       251 vlAI~~iH~~gyIHRDIK------------PdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (550)
T KOG0605|consen  251 VLAIESIHQLGYIHRDIK------------PDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDF  318 (550)
T ss_pred             HHHHHHHHHcCcccccCC------------hhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccc
Confidence            345668899999999999            6699999999999999999853311               0         


Q ss_pred             cC----CC-------------------ccccccccccccccccCCCCCccceEecC
Q psy3254         145 MA----KR-------------------NTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       145 ~~----~~-------------------~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ..    ..                   ...+|||-|||||++.+.+|+..+|+||+
T Consensus       319 ~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL  374 (550)
T KOG0605|consen  319 PKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL  374 (550)
T ss_pred             cccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence            00    00                   12479999999999999999999999996

>KOG0597|consensus

Probab=99.56  E-value=1.7e-16  Score=121.67  Aligned_cols=86  Identities=34%  Similarity=0.592  Sum_probs=74.4

Q ss_pred             CCCCCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccc
Q psy3254          80 APSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMA  159 (177)
Q Consensus        80 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~a  159 (177)
                      +++..+.....++.|+|...+.|++.+            |+||+++..+.+|++|||+||.+.......+..-||+.|||
T Consensus       101 ~v~~~a~~LVsaL~yLhs~rilhrd~k------------PqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmA  168 (808)
T KOG0597|consen  101 QVRAIAYDLVSALYYLHSNRILHRDMK------------PQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMA  168 (808)
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccCC------------cceeeecCCCceeechhhhhhhcccCceeeeeccCcccccC
Confidence            344555556788889999999999999            88999999999999999999988765444555679999999


Q ss_pred             cccccCCCCCccceEecC
Q psy3254         160 PEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~~~~~~~~Diws~  177 (177)
                      ||.+.+.+|+..+|.||+
T Consensus       169 PElv~e~pyd~~sDlWsl  186 (808)
T KOG0597|consen  169 PELVEEQPYDHTSDLWSL  186 (808)
T ss_pred             HHHHcCCCccchhhHHHH
Confidence            999999999999999995

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.56  E-value=1.3e-15  Score=113.56  Aligned_cols=79  Identities=33%  Similarity=0.524  Sum_probs=67.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 qi~~~L~~lH~~giiHrDlk------------p~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (325)
T cd05602         104 EIASALGYLHSLNIVYRDLK------------PENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQ  171 (325)
T ss_pred             HHHHHHHHHHHCCeEecCCC------------HHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCC
Confidence            45788899999999999999            669999999999999999997643333334456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       172 ~~~~~~Diwsl  182 (325)
T cd05602         172 PYDRTVDWWCL  182 (325)
T ss_pred             CCCCccccccc
Confidence            89999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=2.3e-15  Score=111.72  Aligned_cols=79  Identities=34%  Similarity=0.472  Sum_probs=67.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       101 qi~~~l~~lH~~~i~HrDlk------------p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  168 (312)
T cd05585         101 ELLCALENLHKFNVIYRDLK------------PENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGH  168 (312)
T ss_pred             HHHHHHHHHHhCCeEeCCCC------------HHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCC
Confidence            34678899999999999999            669999999999999999997643332334456799999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       169 ~~~~~~Dvwsl  179 (312)
T cd05585         169 GYTKAVDWWTL  179 (312)
T ss_pred             CCCCccceech
Confidence            99999999996

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0667|consensus

Probab=99.55  E-value=5e-16  Score=120.23  Aligned_cols=78  Identities=35%  Similarity=0.437  Sum_probs=65.9

Q ss_pred             CcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC--CeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          85 GFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG--HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        85 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ..+...++.+||..+|+|+|+|            |+||++...+  .+|++|||.+......   ..+++.+..|.|||+
T Consensus       295 ~~Qil~~L~~L~~l~IIHcDLK------------PENILL~~~~r~~vKVIDFGSSc~~~q~---vytYiQSRfYRAPEV  359 (586)
T KOG0667|consen  295 AQQILTALLFLHELGIIHCDLK------------PENILLKDPKRSRIKVIDFGSSCFESQR---VYTYIQSRFYRAPEV  359 (586)
T ss_pred             HHHHHHHHHHHHhCCeeeccCC------------hhheeeccCCcCceeEEecccccccCCc---ceeeeeccccccchh
Confidence            3455788889999999999999            8899996533  6999999999764432   237889999999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+.+|+.+.|+|||
T Consensus       360 ILGlpY~~~IDmWSL  374 (586)
T KOG0667|consen  360 ILGLPYDTAIDMWSL  374 (586)
T ss_pred             hccCCCCCccceeeh
Confidence            999999999999997

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.55  E-value=1.6e-15  Score=113.02  Aligned_cols=78  Identities=32%  Similarity=0.446  Sum_probs=66.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+..
T Consensus       110 i~~aL~~LH~~~ivHrDlk------------p~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  177 (323)
T cd05616         110 IAIGLFFLHSKGIIYRDLK------------LDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQP  177 (323)
T ss_pred             HHHHHHHHHHCCEEecCCC------------HHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCC
Confidence            4678889999999999999            6699999999999999999975432223334567999999999999989


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       178 ~~~~~DiwSl  187 (323)
T cd05616         178 YGKSVDWWAF  187 (323)
T ss_pred             CCCccchhch
Confidence            9999999996

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.54  E-value=2.6e-15  Score=112.20  Aligned_cols=79  Identities=30%  Similarity=0.535  Sum_probs=66.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       103 qi~~aL~~LH~~~ivHrDik------------p~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  170 (328)
T cd05593         103 EIVSALDYLHSGKIVYRDLK------------LENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDN  170 (328)
T ss_pred             HHHHHHHHHHhCCeEecccC------------HHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCC
Confidence            34678889999999999999            679999999999999999987543322233446799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       171 ~~~~~~Diwsl  181 (328)
T cd05593         171 DYGRAVDWWGL  181 (328)
T ss_pred             CCCccCCcccc
Confidence            89999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.54  E-value=2.6e-15  Score=112.06  Aligned_cols=79  Identities=34%  Similarity=0.518  Sum_probs=66.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 qi~~al~~lH~~givH~Dlk------------p~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (325)
T cd05604         104 EIASALGYLHSINIVYRDLK------------PENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQ  171 (325)
T ss_pred             HHHHHHHHHHHCCeeecCCC------------HHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCC
Confidence            44788899999999999999            669999999999999999987543322233456799999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Dvwsl  182 (325)
T cd05604         172 PYDNTVDWWCL  182 (325)
T ss_pred             CCCCcCccccc
Confidence            99999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0695|consensus

Probab=99.54  E-value=1.3e-15  Score=110.77  Aligned_cols=77  Identities=35%  Similarity=0.583  Sum_probs=69.9

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      .-+++++|..+++.++++++            |++++..|++|++|+|+++.--.+....+++|||+.|.|||++++..|
T Consensus       361 ~lal~flh~rgiiyrdlkld------------nvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeey  428 (593)
T KOG0695|consen  361 CLALNFLHERGIIYRDLKLD------------NVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEY  428 (593)
T ss_pred             HHHHHHHhhcCeeeeecccc------------ceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhccccc
Confidence            45678999999999999977            999999999999999999876556667788999999999999999999


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.++|+|++
T Consensus       429 gfsvdwwal  437 (593)
T KOG0695|consen  429 GFSVDWWAL  437 (593)
T ss_pred             CceehHHHH
Confidence            999999985

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.54  E-value=2.8e-15  Score=111.81  Aligned_cols=79  Identities=33%  Similarity=0.521  Sum_probs=66.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            +.||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 qi~~~l~~lH~~givH~dik------------p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (323)
T cd05575         104 EIASALGYLHSLNIIYRDLK------------PENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQ  171 (323)
T ss_pred             HHHHHHHHHHHCCeEeCCCC------------HHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCC
Confidence            45788899999999999999            669999999999999999987543332333456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Dvwsl  182 (323)
T cd05575         172 PYDRTVDWWCL  182 (323)
T ss_pred             CCCcccccccc
Confidence            89999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.54  E-value=2e-15  Score=112.32  Aligned_cols=79  Identities=33%  Similarity=0.526  Sum_probs=67.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 qi~~al~~LH~~~ivH~dlk------------p~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (316)
T cd05592         104 EIICGLQFLHKKGIIYRDLK------------LDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQ  171 (316)
T ss_pred             HHHHHHHHHHHCCEEeCCCC------------HHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCC
Confidence            45788899999999999999            669999999999999999997653332334456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Dvwsl  182 (316)
T cd05592         172 KYNESVDWWSF  182 (316)
T ss_pred             CCCCcccchhH
Confidence            89999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0986|consensus

Probab=99.54  E-value=2e-15  Score=113.08  Aligned_cols=76  Identities=33%  Similarity=0.468  Sum_probs=65.4

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..++..+|...++.||+|            |+|||++..|+++|+|+|+|..+... +.....+||.+|||||++....|
T Consensus       297 ~cGLehlH~~~iVYRDLK------------PeNILLDd~GhvRISDLGLAvei~~g-~~~~~rvGT~GYMAPEvl~ne~Y  363 (591)
T KOG0986|consen  297 ICGLEHLHRRRIVYRDLK------------PENILLDDHGHVRISDLGLAVEIPEG-KPIRGRVGTVGYMAPEVLQNEVY  363 (591)
T ss_pred             HhhHHHHHhcceeeccCC------------hhheeeccCCCeEeeccceEEecCCC-CccccccCcccccCHHHHcCCcc
Confidence            345667888899999999            77999999999999999999877654 33444599999999999999899


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.++|+||+
T Consensus       364 ~~s~Dwf~l  372 (591)
T KOG0986|consen  364 DFSPDWFSL  372 (591)
T ss_pred             cCCccHHHH
Confidence            999999985

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.54  E-value=3.1e-15  Score=111.41  Aligned_cols=79  Identities=32%  Similarity=0.520  Sum_probs=66.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 qi~~~L~~lH~~~ivH~Dlk------------p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (321)
T cd05603         104 EVASAIGYLHSLNIIYRDLK------------PENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKE  171 (321)
T ss_pred             HHHHHHHHHHHCCeEeccCC------------HHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCC
Confidence            45788899999999999999            669999999999999999987543332333456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Diwsl  182 (321)
T cd05603         172 PYDRTVDWWCL  182 (321)
T ss_pred             CCCCcCccccc
Confidence            89999999996

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.54  E-value=3.4e-15  Score=111.20  Aligned_cols=79  Identities=38%  Similarity=0.527  Sum_probs=66.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 qi~~aL~~LH~~~ivHrDik------------p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (321)
T cd05591         104 EVTLALMFLHRHGVIYRDLK------------LDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQEL  171 (321)
T ss_pred             HHHHHHHHHHHCCeeccCCC------------HHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCC
Confidence            34678889999999999999            669999999999999999987643333334456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Dvwsl  182 (321)
T cd05591         172 EYGPSVDWWAL  182 (321)
T ss_pred             CCCCccceech
Confidence            89999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG4279|consensus

Probab=99.53  E-value=1.6e-15  Score=119.10  Aligned_cols=80  Identities=40%  Similarity=0.581  Sum_probs=69.7

Q ss_pred             cchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          86 FCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        86 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      .++.++++|+|...++|||+|-+            |++++. .|.+|++|||-++.+..-.....++.||..|||||++.
T Consensus       682 kQILeGLkYLHen~IVHRDIKGD------------NVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvID  749 (1226)
T KOG4279|consen  682 KQILEGLKYLHENKIVHRDIKGD------------NVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVID  749 (1226)
T ss_pred             HHHHHHhhhhhhcceeeccccCC------------cEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhc
Confidence            35689999999999999999966            999975 78899999999998876555667889999999999997


Q ss_pred             CC--CCCccceEecC
Q psy3254         165 EI--GYDCVADMWSL  177 (177)
Q Consensus       165 ~~--~~~~~~Diws~  177 (177)
                      .+  +|++++|||||
T Consensus       750 qG~RGYG~aADIWS~  764 (1226)
T KOG4279|consen  750 QGPRGYGKAADIWSF  764 (1226)
T ss_pred             cCCcCCCchhhhhhc
Confidence            54  69999999997

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.53  E-value=5.3e-15  Score=110.29  Aligned_cols=79  Identities=33%  Similarity=0.442  Sum_probs=66.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       108 qi~~~l~~lH~~~ivH~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (323)
T cd05584         108 EISLALEHLHQQGIIYRDLK------------PENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRS  175 (323)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCC
Confidence            34678889999999999999            669999999999999999987543333333446799999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       176 ~~~~~~Diwsl  186 (323)
T cd05584         176 GHGKAVDWWSL  186 (323)
T ss_pred             CCCCcceeccc
Confidence            89999999996

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.53  E-value=3.9e-15  Score=111.30  Aligned_cols=79  Identities=30%  Similarity=0.482  Sum_probs=66.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||..|+|||++.+.
T Consensus       104 qi~~~l~~lH~~~ivH~Dik------------p~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (329)
T cd05618         104 EISLALNYLHERGIIYRDLK------------LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE  171 (329)
T ss_pred             HHHHHHHHHHHCCeeeCCCC------------HHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCC
Confidence            34678889999999999999            669999999999999999997543332333456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Diwsl  182 (329)
T cd05618         172 DYGFSVDWWAL  182 (329)
T ss_pred             CCCCccceecc
Confidence            99999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.53  E-value=3.5e-15  Score=111.33  Aligned_cols=79  Identities=30%  Similarity=0.530  Sum_probs=65.9

Q ss_pred             chHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|. .+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+
T Consensus       103 qi~~aL~~lH~~~~ivHrDik------------p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  170 (325)
T cd05594         103 EIVSALDYLHSEKNVVYRDLK------------LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED  170 (325)
T ss_pred             HHHHHHHHHHhcCCEEecCCC------------CCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHcc
Confidence            45778889997 799999999            66999999999999999998754332223344679999999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       171 ~~~~~~~Diwsl  182 (325)
T cd05594         171 NDYGRAVDWWGL  182 (325)
T ss_pred             CCCCCccccccc
Confidence            889999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0983|consensus

Probab=99.53  E-value=3.6e-15  Score=105.55  Aligned_cols=76  Identities=41%  Similarity=0.672  Sum_probs=61.5

Q ss_pred             HHHHhhhc-hhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC--
Q psy3254          89 FEFLKFLS-YDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--  165 (177)
Q Consensus        89 ~~~l~~l~-~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~--  165 (177)
                      ..++.|+. ..+++|||.|            |+|||++..|.+|+||||++..+.+... .+...|.+.|||||.+--  
T Consensus       201 v~AL~YLKeKH~viHRDvK------------PSNILlDe~GniKlCDFGIsGrlvdSkA-htrsAGC~~YMaPERidp~~  267 (391)
T KOG0983|consen  201 VKALYYLKEKHGVIHRDVK------------PSNILLDERGNIKLCDFGISGRLVDSKA-HTRSAGCAAYMAPERIDPPD  267 (391)
T ss_pred             HHHHHHHHHhcceeecccC------------ccceEEccCCCEEeecccccceeecccc-cccccCCccccCccccCCCC
Confidence            45666775 4468999999            7799999999999999999988766533 344578999999999953  


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..|+-.+|||||
T Consensus       268 ~~kYDiRaDVWSl  280 (391)
T KOG0983|consen  268 KPKYDIRADVWSL  280 (391)
T ss_pred             CCccchhhhhhhh
Confidence             368889999996

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.53  E-value=4.3e-15  Score=110.99  Aligned_cols=79  Identities=30%  Similarity=0.489  Sum_probs=66.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 qi~~al~~lH~~~ivHrDlk------------p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (327)
T cd05617         104 EICIALNFLHERGIIYRDLK------------LDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE  171 (327)
T ss_pred             HHHHHHHHHHHCCeeccCCC------------HHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCC
Confidence            34678889999999999999            669999999999999999997543322333456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Diwsl  182 (327)
T cd05617         172 EYGFSVDWWAL  182 (327)
T ss_pred             CCCchheeehh
Confidence            99999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=5.2e-15  Score=110.62  Aligned_cols=79  Identities=35%  Similarity=0.490  Sum_probs=65.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|..+++|++++            ++||+++.++.++++|||+++............+||..|+|||++.+.
T Consensus       104 qil~al~~LH~~~ivHrDlk------------p~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (330)
T cd05586         104 ELVLALEHLHKYDIVYRDLK------------PENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDE  171 (330)
T ss_pred             HHHHHHHHHHHCCeEeccCC------------HHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCC
Confidence            45788899999999999999            669999999999999999987543333334456799999999999764


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++||||+
T Consensus       172 ~~~~~~~Dvwsl  183 (330)
T cd05586         172 KGYTKHVDFWSL  183 (330)
T ss_pred             CCCCCccceecc
Confidence             58899999996

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.52  E-value=3.7e-15  Score=111.15  Aligned_cols=79  Identities=32%  Similarity=0.542  Sum_probs=66.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.............||+.|+|||++.+.
T Consensus       103 qi~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  170 (323)
T cd05595         103 EIVSALEYLHSRDVVYRDIK------------LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN  170 (323)
T ss_pred             HHHHHHHHHHHCCeEecCCC------------HHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCC
Confidence            34678889999999999999            669999999999999999987543322233346799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       171 ~~~~~~DiwSl  181 (323)
T cd05595         171 DYGRAVDWWGL  181 (323)
T ss_pred             CCCchhchhhh
Confidence            99999999996

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0696|consensus

Probab=99.52  E-value=2.5e-15  Score=111.77  Aligned_cols=74  Identities=36%  Similarity=0.587  Sum_probs=65.4

Q ss_pred             HhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCCCcc
Q psy3254          92 LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV  171 (177)
Q Consensus        92 l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~~~~  171 (177)
                      +-++|..+++.|+++++            |++++.+|++|++|||+++.-.-......+.|||+-|+|||++...+|+.+
T Consensus       463 LFFLh~kgIiYRDLKLD------------NvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgks  530 (683)
T KOG0696|consen  463 LFFLHSKGIIYRDLKLD------------NVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKS  530 (683)
T ss_pred             hhhhhcCCeeeeecccc------------ceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccc
Confidence            34889999999999977            999999999999999999854333445667999999999999999999999


Q ss_pred             ceEecC
Q psy3254         172 ADMWSL  177 (177)
Q Consensus       172 ~Diws~  177 (177)
                      +|+|||
T Consensus       531 vDWWa~  536 (683)
T KOG0696|consen  531 VDWWAF  536 (683)
T ss_pred             hhHHHH
Confidence            999986

>KOG1187|consensus

Probab=99.52  E-value=2.2e-16  Score=118.89  Aligned_cols=80  Identities=29%  Similarity=0.325  Sum_probs=64.7

Q ss_pred             cchHHHHhhhchhh---HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccc-cccccccccc
Q psy3254          86 FCDFEFLKFLSYDD---LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV-IGTPFWMAPE  161 (177)
Q Consensus        86 ~~~~~~l~~l~~~~---~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~-~g~~~y~aPe  161 (177)
                      .-...++.|+|...   ++|+|+|            ++||+++.+...|++|||+|+..........+. .||.+|+|||
T Consensus       181 ~g~A~gL~yLH~~~~~~iiHrDiK------------ssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PE  248 (361)
T KOG1187|consen  181 LGAARGLAYLHEGCPPPIIHRDIK------------SSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPE  248 (361)
T ss_pred             HHHHHHHHHHccCCCCCEecCCCC------------HHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChh
Confidence            34467788999865   9999999            669999999999999999997654311122222 7999999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      +...+..+.++|||||
T Consensus       249 y~~~g~lt~KsDVySF  264 (361)
T KOG1187|consen  249 YASTGKLTEKSDVYSF  264 (361)
T ss_pred             hhccCCcCcccccccc
Confidence            9988889999999997

>KOG0664|consensus

Probab=99.52  E-value=1.8e-15  Score=107.21  Aligned_cols=86  Identities=24%  Similarity=0.365  Sum_probs=70.7

Q ss_pred             CCCCCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCcccccccccc
Q psy3254          80 APSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWM  158 (177)
Q Consensus        80 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~  158 (177)
                      .+...-+++.++++|+|..++.|||+|            |.|++++.+..+|++|||++|.-+.... ..+..+.|.+|.
T Consensus       157 HvKVFlYQILRGLKYLHsA~ILHRDIK------------PGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYR  224 (449)
T KOG0664|consen  157 HVKVFVYQILRGLKYLHTANILHRDIK------------PGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYR  224 (449)
T ss_pred             hhhhhHHHHHhhhHHHhhcchhhccCC------------CccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhc
Confidence            344555677899999999999999999            5599999999999999999987544322 234456789999


Q ss_pred             ccccccC-CCCCccceEecC
Q psy3254         159 APEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~~-~~~~~~~Diws~  177 (177)
                      |||++.+ ..|+.++||||.
T Consensus       225 APEiLMGaRhYs~AvDiWSV  244 (449)
T KOG0664|consen  225 APELLMGARRYTGAVDIWSV  244 (449)
T ss_pred             cHHHhhcchhhcCccceehh
Confidence            9999987 569999999984

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.52  E-value=3.3e-15  Score=113.13  Aligned_cols=79  Identities=33%  Similarity=0.569  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---------------------  145 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------  145 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++.+....                     
T Consensus       109 qi~~aL~~lH~~givHrDlK------------p~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (363)
T cd05628         109 ETVLAIDSIHQLGFIHRDIK------------PDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNM  176 (363)
T ss_pred             HHHHHHHHHHhCCeEecCCC------------HHHeEECCCCCEEEeeccCccccccccccccccccccccccccccccc
Confidence            34678889999999999999            669999999999999999987543210                     


Q ss_pred             --------------CCCccccccccccccccccCCCCCccceEecC
Q psy3254         146 --------------AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       146 --------------~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                    ......+||+.|+|||++.+..++.++|||||
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSl  222 (363)
T cd05628         177 NSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSL  222 (363)
T ss_pred             ccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhh
Confidence                          00123579999999999998899999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.52  E-value=4.3e-15  Score=110.79  Aligned_cols=79  Identities=32%  Similarity=0.418  Sum_probs=66.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       109 qi~~al~~lH~~~ivH~dlk------------p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  176 (324)
T cd05587         109 EIAIGLFFLHSKGIIYRDLK------------LDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQ  176 (324)
T ss_pred             HHHHHHHHHHHCCeEecCCC------------HHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCC
Confidence            34678899999999999999            669999999999999999987532222233346799999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       177 ~~~~~~Diwsl  187 (324)
T cd05587         177 PYGKSVDWWAF  187 (324)
T ss_pred             CCCcccchhhh
Confidence            89999999996

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.52  E-value=3.9e-15  Score=110.71  Aligned_cols=79  Identities=32%  Similarity=0.507  Sum_probs=66.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||..|+|||++.+.
T Consensus       104 qi~~~l~~lH~~~ivHrDlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (316)
T cd05620         104 EIVCGLQFLHSKGIIYRDLK------------LDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGL  171 (316)
T ss_pred             HHHHHHHHHHHCCeEecCCC------------HHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCC
Confidence            44678899999999999999            669999999999999999987533222233456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       172 ~~~~~~Diwsl  182 (316)
T cd05620         172 KYTFSVDWWSF  182 (316)
T ss_pred             CCCcccchhhh
Confidence            99999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.51  E-value=4.7e-15  Score=110.48  Aligned_cols=79  Identities=35%  Similarity=0.505  Sum_probs=66.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 ql~~~L~~lH~~~ivH~dlk------------p~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (320)
T cd05590         104 EITSALMFLHDKGIIYRDLK------------LDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEM  171 (320)
T ss_pred             HHHHHHHHHHHCCeEeCCCC------------HHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCC
Confidence            34678889999999999999            669999999999999999987543322333456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Diwsl  182 (320)
T cd05590         172 LYGPSVDWWAM  182 (320)
T ss_pred             CCCCccchhhh
Confidence            89999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.51  E-value=5.8e-15  Score=110.38  Aligned_cols=79  Identities=32%  Similarity=0.489  Sum_probs=66.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       104 qi~~~l~~lH~~~ivH~dlk------------p~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (329)
T cd05588         104 EISLALNFLHERGIIYRDLK------------LDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGE  171 (329)
T ss_pred             HHHHHHHHHHHCCeEecCCC------------HHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCC
Confidence            34678889999999999999            669999999999999999987533222334456899999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       172 ~~~~~~Diwsl  182 (329)
T cd05588         172 DYGFSVDWWAL  182 (329)
T ss_pred             CCCCccceech
Confidence            99999999996

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.51  E-value=5.3e-15  Score=110.34  Aligned_cols=79  Identities=35%  Similarity=0.577  Sum_probs=66.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+|++.|+|||++.+.
T Consensus       109 qi~~al~~lH~~~ivHrdlk------------p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  176 (324)
T cd05589         109 CVVLGLQYLHENKIVYRDLK------------LDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTET  176 (324)
T ss_pred             HHHHHHHHHHhCCeEecCCC------------HHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCC
Confidence            34678889999999999999            669999999999999999987543332334456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       177 ~~~~~~Diwsl  187 (324)
T cd05589         177 SYTRAVDWWGL  187 (324)
T ss_pred             CCCcccchhhH
Confidence            89999999996

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.50  E-value=6.7e-15  Score=109.79  Aligned_cols=79  Identities=32%  Similarity=0.430  Sum_probs=66.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       109 qi~~al~~lH~~~ivHrDik------------p~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  176 (323)
T cd05615         109 EISVGLFFLHRRGIIYRDLK------------LDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQ  176 (323)
T ss_pred             HHHHHHHHHHHCCeeccCCC------------HHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCC
Confidence            34678889999999999999            669999999999999999987543332233446799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       177 ~~~~~~Diwsl  187 (323)
T cd05615         177 PYGKSVDWWAY  187 (323)
T ss_pred             CCCCccchhhh
Confidence            89999999996

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.50  E-value=8.3e-15  Score=111.24  Aligned_cols=79  Identities=34%  Similarity=0.528  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++.+..... ...+.+||+.|+|||++..
T Consensus       150 qil~aL~~LH~~~IvHrDLK------------p~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  217 (370)
T cd05621         150 EVVLALDAIHSMGLIHRDVK------------PDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             HHHHHHHHHHHCCeEecCCC------------HHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhc
Confidence            34678889999999999999            6699999999999999999987643222 2345679999999999975


Q ss_pred             C----CCCccceEecC
Q psy3254         166 I----GYDCVADMWSL  177 (177)
Q Consensus       166 ~----~~~~~~Diws~  177 (177)
                      .    .++.++||||+
T Consensus       218 ~~~~~~~~~~~DiwSl  233 (370)
T cd05621         218 QGGDGYYGRECDWWSV  233 (370)
T ss_pred             cCCCCCCCcccCEEee
Confidence            3    37889999996

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG1006|consensus

Probab=99.50  E-value=6e-15  Score=103.96  Aligned_cols=79  Identities=42%  Similarity=0.691  Sum_probs=62.8

Q ss_pred             cchHHHHhhhc-hhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          86 FCDFEFLKFLS-YDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        86 ~~~~~~l~~l~-~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      .+-..+++++. ...++|||+|            |+|||++..|.+|+||||++..+.+.... +.-.|...|||||.+.
T Consensus       174 vatV~AL~yLK~~lkiIHRDvK------------PSNILldr~G~vKLCDFGIcGqLv~SiAk-T~daGCrpYmAPERi~  240 (361)
T KOG1006|consen  174 VATVDALDYLKEELKIIHRDVK------------PSNILLDRHGDVKLCDFGICGQLVDSIAK-TVDAGCRPYMAPERID  240 (361)
T ss_pred             eeehhHHHHHHHHhhhhhccCC------------hhheEEecCCCEeeecccchHhHHHHHHh-hhccCCccccChhccC
Confidence            34456777775 4468999999            77999999999999999999887654322 2346888999999996


Q ss_pred             C--CCCCccceEecC
Q psy3254         165 E--IGYDCVADMWSL  177 (177)
Q Consensus       165 ~--~~~~~~~Diws~  177 (177)
                      .  .+|+-+||+|||
T Consensus       241 p~~~gyDiRSDvWSL  255 (361)
T KOG1006|consen  241 PSDKGYDIRSDVWSL  255 (361)
T ss_pred             CccCCcchhhhhhhh
Confidence            3  469999999996

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.49  E-value=1.1e-14  Score=110.03  Aligned_cols=78  Identities=33%  Similarity=0.594  Sum_probs=64.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc----------------------
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM----------------------  145 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~----------------------  145 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.+....                      
T Consensus       110 i~~~L~~lH~~givHrDLk------------p~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (360)
T cd05627         110 TVLAIDAIHQLGFIHRDIK------------PDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMN  177 (360)
T ss_pred             HHHHHHHHHHCCeEccCCC------------HHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccc
Confidence            4678889999999999999            669999999999999999987542110                      


Q ss_pred             -------------CCCccccccccccccccccCCCCCccceEecC
Q psy3254         146 -------------AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       146 -------------~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                   ......+||+.|+|||++.+..|+.++|||||
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSl  222 (360)
T cd05627         178 SKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSL  222 (360)
T ss_pred             cccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccc
Confidence                         01123579999999999999899999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.49  E-value=1.4e-14  Score=110.37  Aligned_cols=78  Identities=32%  Similarity=0.541  Sum_probs=63.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc-----------------------
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT-----------------------  144 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~-----------------------  144 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++.+...                       
T Consensus       110 i~~al~~lH~~~ivHrDlK------------p~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (382)
T cd05625         110 LTCAVESVHKMGFIHRDIK------------PDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEW  177 (382)
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccc
Confidence            4678889999999999999            66999999999999999997532100                       


Q ss_pred             ------------------------cCCCccccccccccccccccCCCCCccceEecC
Q psy3254         145 ------------------------MAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       145 ------------------------~~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                              .......+||+.|+|||++.+..|+.++||||+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (382)
T cd05625         178 GDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV  234 (382)
T ss_pred             cccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence                                    000123479999999999998899999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG4236|consensus

Probab=99.49  E-value=6.2e-15  Score=112.64  Aligned_cols=78  Identities=35%  Similarity=0.666  Sum_probs=67.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC---CeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      +++.+++++|..+++|+|+|            |+|+++....   .+|+||||.||.+... .-+...+||+.|+|||++
T Consensus       672 QIL~ALr~LH~knIvHCDLK------------PENVLLas~~~FPQvKlCDFGfARiIgEk-sFRrsVVGTPAYLaPEVL  738 (888)
T KOG4236|consen  672 QILVALRYLHFKNIVHCDLK------------PENVLLASASPFPQVKLCDFGFARIIGEK-SFRRSVVGTPAYLAPEVL  738 (888)
T ss_pred             HHHHHHHHhhhcceeeccCC------------chheeeccCCCCCceeeccccceeecchh-hhhhhhcCCccccCHHHH
Confidence            34678889999999999999            7799996543   5899999999988765 345568999999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      +..+|+.+-|+||.
T Consensus       739 rnkGyNrSLDMWSV  752 (888)
T KOG4236|consen  739 RNKGYNRSLDMWSV  752 (888)
T ss_pred             hhccccccccceee
Confidence            99999999999984

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.49  E-value=9.9e-15  Score=106.96  Aligned_cols=78  Identities=32%  Similarity=0.445  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+|++++.++.++++|||+++..... ......+||..|+|||++.+.
T Consensus       110 qi~~~l~~lH~~~iiH~dik------------p~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~  176 (285)
T cd05631         110 ELCCGLEDLQRERIVYRDLK------------PENILLDDRGHIRISDLGLAVQIPEG-ETVRGRVGTVGYMAPEVINNE  176 (285)
T ss_pred             HHHHHHHHHHhCCEEeCCCC------------HHHEEECCCCCEEEeeCCCcEEcCCC-CeecCCCCCCCccCHhhhcCC
Confidence            34677889999999999999            66999999999999999999765432 222345799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       177 ~~~~~~Dvwsl  187 (285)
T cd05631         177 KYTFSPDWWGL  187 (285)
T ss_pred             CCCcccCchhH
Confidence            99999999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0193|consensus

Probab=99.49  E-value=1.4e-14  Score=111.81  Aligned_cols=79  Identities=27%  Similarity=0.454  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccc--ccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      +...++.|||..+|+|+|++..            ||++..++.++|+|||++..-..  .........|+..|||||+++
T Consensus       496 QiaqGM~YLHAK~IIHrDLKSn------------NIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIR  563 (678)
T KOG0193|consen  496 QIAQGMDYLHAKNIIHRDLKSN------------NIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIR  563 (678)
T ss_pred             HHHHhhhhhhhhhhhhhhcccc------------ceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHh
Confidence            3467888999999999999944            99999999999999999864321  112233456888999999997


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         .++|++.+|||||
T Consensus       564 mqd~nPfS~qSDVYaF  579 (678)
T KOG0193|consen  564 MQDDNPFSFQSDVYAF  579 (678)
T ss_pred             hcccCCCCcccchhhh
Confidence               3689999999997

>KOG0032|consensus

Probab=99.49  E-value=8.9e-15  Score=110.68  Aligned_cols=79  Identities=34%  Similarity=0.539  Sum_probs=68.5

Q ss_pred             cchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC----CCeEEeeeecccccccccCCCccccccccccccc
Q psy3254          86 FCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE----GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE  161 (177)
Q Consensus        86 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe  161 (177)
                      .+..++++++|..+++|+|++            |+|+++...    +.++++|||++..... .......+||+.|+|||
T Consensus       142 ~~il~av~~lH~~gvvHrDlK------------pEN~L~~~~~~~~~~ik~~DFGla~~~~~-~~~~~~~~Gtp~y~APE  208 (382)
T KOG0032|consen  142 RQILEAVKYLHSLGVVHRDLK------------PENLLLASKDEGSGRIKLIDFGLAKFIKP-GERLHTIVGTPEYVAPE  208 (382)
T ss_pred             HHHHHHHHHHHhCCceeccCC------------HHHeeeccccCCCCcEEEeeCCCceEccC-CceEeeecCCccccCch
Confidence            355788899999999999999            779998543    4799999999988766 45566789999999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      ++....|+..+||||+
T Consensus       209 vl~~~~y~~~~DiWS~  224 (382)
T KOG0032|consen  209 VLGGRPYGDEVDVWSI  224 (382)
T ss_pred             hhcCCCCCcccchhHH
Confidence            9999999999999984

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.49  E-value=7.9e-15  Score=107.53  Aligned_cols=78  Identities=33%  Similarity=0.510  Sum_probs=66.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++..... .......||+.|+|||++.+.
T Consensus       118 qi~~aL~~lH~~~iiH~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  184 (290)
T cd07862         118 QLLRGLDFLHSHRVVHRDLK------------PQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQS  184 (290)
T ss_pred             HHHHHHHHHHHCCeeeCCCC------------HHHEEEcCCCCEEEccccceEeccCC-cccccccccccccChHHHhCC
Confidence            44678889999999999999            66999999999999999999765433 233446789999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       185 ~~~~~~Diwsl  195 (290)
T cd07862         185 SYATPVDLWSV  195 (290)
T ss_pred             CCCCccchHHH
Confidence            89999999995

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.49  E-value=1.4e-14  Score=110.08  Aligned_cols=79  Identities=32%  Similarity=0.500  Sum_probs=64.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.+..... .....+||+.|+|||++..
T Consensus       150 qi~~aL~~LH~~~ivHrDLk------------p~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~  217 (371)
T cd05622         150 EVVLALDAIHSMGFIHRDVK------------PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS  217 (371)
T ss_pred             HHHHHHHHHHHCCEEeCCCC------------HHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhc
Confidence            34678889999999999999            6699999999999999999986643221 2335679999999999975


Q ss_pred             C----CCCccceEecC
Q psy3254         166 I----GYDCVADMWSL  177 (177)
Q Consensus       166 ~----~~~~~~Diws~  177 (177)
                      .    .++.++|||||
T Consensus       218 ~~~~~~~~~~~DiwSl  233 (371)
T cd05622         218 QGGDGYYGRECDWWSV  233 (371)
T ss_pred             cCCCccCCCccceeeh
Confidence            3    37889999996

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.49  E-value=1.3e-14  Score=108.56  Aligned_cols=75  Identities=36%  Similarity=0.604  Sum_probs=65.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.....   ....+||+.|+|||++.+..
T Consensus       127 i~~aL~~LH~~~ivH~dlk------------p~NIll~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~  191 (329)
T PTZ00263        127 LVLAFEYLHSKDIIYRDLK------------PENLLLDNKGHVKVTDFGFAKKVPDR---TFTLCGTPEYLAPEVIQSKG  191 (329)
T ss_pred             HHHHHHHHHHCCeeecCCC------------HHHEEECCCCCEEEeeccCceEcCCC---cceecCChhhcCHHHHcCCC
Confidence            4678889999999999999            66999999999999999999865432   23467999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       192 ~~~~~Diwsl  201 (329)
T PTZ00263        192 HGKAVDWWTM  201 (329)
T ss_pred             CCCcceeech
Confidence            9999999996

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=1.9e-14  Score=107.69  Aligned_cols=76  Identities=39%  Similarity=0.662  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++....   .....+||+.|+|||++.+.
T Consensus       109 qi~~~l~~lH~~~ivH~dlk------------p~Nil~~~~~~~kL~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~  173 (333)
T cd05600         109 EMFEAVDALHELGYIHRDLK------------PENFLIDASGHIKLTDFGLSKGIVT---YANSVVGSPDYMAPEVLRGK  173 (333)
T ss_pred             HHHHHHHHHHHCCccccCCC------------HHHEEECCCCCEEEEeCcCCccccc---ccCCcccCccccChhHhcCC
Confidence            44678889999999999999            6699999999999999999976543   23356799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       174 ~~~~~~Dvwsl  184 (333)
T cd05600         174 GYDFTVDYWSL  184 (333)
T ss_pred             CCCCccceecc
Confidence            99999999996

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=1.6e-14  Score=109.33  Aligned_cols=79  Identities=33%  Similarity=0.546  Sum_probs=64.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--------------------  146 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------  146 (177)
                      +...++.++|..+++|++++            ++||+++.++.++++|||+++.+.....                    
T Consensus       109 qi~~aL~~lH~~~ivH~Dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (364)
T cd05599         109 ETILAIDSIHKLGYIHRDIK------------PDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFIS  176 (364)
T ss_pred             HHHHHHHHHHHCCeEeccCC------------HHHeEECCCCCEEEeecccceecccccccccccccccccccccccccc
Confidence            45788899999999999999            6699999999999999999875422100                    


Q ss_pred             ------------------CCccccccccccccccccCCCCCccceEecC
Q psy3254         147 ------------------KRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       147 ------------------~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                        .....+||+.|+|||++....++.++|||||
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  225 (364)
T cd05599         177 KPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSL  225 (364)
T ss_pred             ccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecc
Confidence                              0112469999999999998889999999996

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.48  E-value=9.4e-15  Score=108.68  Aligned_cols=79  Identities=37%  Similarity=0.508  Sum_probs=66.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++............+||..|+|||++.+.
T Consensus       104 qi~~al~~LH~~~ivHrdik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (316)
T cd05619         104 EIICGLQFLHSKGIVYRDLK------------LDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQ  171 (316)
T ss_pred             HHHHHHHHHHhCCeEeCCCC------------HHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCC
Confidence            34678889999999999999            669999999999999999987543222233446799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       172 ~~~~~~Dvwsl  182 (316)
T cd05619         172 KYNTSVDWWSF  182 (316)
T ss_pred             CCCchhhhhhH
Confidence            89999999996

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=1.7e-14  Score=108.51  Aligned_cols=79  Identities=34%  Similarity=0.567  Sum_probs=66.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---------------------  145 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------  145 (177)
                      +...++.++|..+++|++++            ++||+++.++.++++|||+++.+....                     
T Consensus       109 qi~~aL~~LH~~giiH~Dlk------------p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (350)
T cd05573         109 ELVLALDSVHKLGFIHRDIK------------PDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVR  176 (350)
T ss_pred             HHHHHHHHHHHCCeeccCCC------------HHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccc
Confidence            45788899999999999999            669999999999999999997654332                     


Q ss_pred             --------CCCccccccccccccccccCCCCCccceEecC
Q psy3254         146 --------AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       146 --------~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                              .......||+.|+|||++.+..++.++|||||
T Consensus       177 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  216 (350)
T cd05573         177 RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSL  216 (350)
T ss_pred             ccccccccccccccccCccccCHHHHcCCCCCCceeeEec
Confidence                    12234579999999999999899999999996

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.48  E-value=1.8e-14  Score=107.76  Aligned_cols=79  Identities=33%  Similarity=0.459  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++...... ......+||+.|+|||++.+
T Consensus       113 qi~~~l~~lH~~~ivHrDlk------------p~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  180 (332)
T cd05614         113 EIILALEHLHKLGIVYRDIK------------LENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRG  180 (332)
T ss_pred             HHHHHHHHHHHCCcEecCCC------------HHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcC
Confidence            45788899999999999999            669999999999999999997653321 22334679999999999986


Q ss_pred             C-CCCccceEecC
Q psy3254         166 I-GYDCVADMWSL  177 (177)
Q Consensus       166 ~-~~~~~~Diws~  177 (177)
                      . .++.++|||||
T Consensus       181 ~~~~~~~~Diwsl  193 (332)
T cd05614         181 KGGHGKAVDWWSL  193 (332)
T ss_pred             CCCCCCccccccc
Confidence            4 47889999996

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.48  E-value=8.7e-15  Score=107.78  Aligned_cols=79  Identities=15%  Similarity=0.248  Sum_probs=65.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-------CCCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-------AKRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-------~~~~~~~g~~~y~a  159 (177)
                      ....++.++|..+++|+|++            |+|++++.++.++++|||+++.+....       .......||+.|+|
T Consensus       134 qi~~~l~~lH~~~iiHrDiK------------p~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~a  201 (294)
T PHA02882        134 DMLTTLEYIHEHGISHGDIK------------PENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAG  201 (294)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccC
Confidence            45778889999999999999            669999999999999999998653211       11223469999999


Q ss_pred             cccccCCCCCccceEecC
Q psy3254         160 PEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~~~~~~~~Diws~  177 (177)
                      ||+..+..++.++|||||
T Consensus       202 pe~~~~~~~~~~~DiwSl  219 (294)
T PHA02882        202 LDAHNGACVTRRGDLESL  219 (294)
T ss_pred             HHHhCCCCCCcHHHHHHH
Confidence            999998889999999995

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.47  E-value=2e-14  Score=109.33  Aligned_cols=79  Identities=32%  Similarity=0.526  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc----------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT----------------------  144 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~----------------------  144 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||++..+...                      
T Consensus       109 qi~~al~~lH~~~ivHrDlk------------p~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (376)
T cd05598         109 ELTCAIESVHKMGFIHRDIK------------PDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEE  176 (376)
T ss_pred             HHHHHHHHHHHCCeEeCCCC------------HHHEEECCCCCEEEEeCCCCcccccccccccccccccccccccccccc
Confidence            34678899999999999999            66999999999999999997532100                      


Q ss_pred             ---------------------cCCCccccccccccccccccCCCCCccceEecC
Q psy3254         145 ---------------------MAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       145 ---------------------~~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                           .......+||+.|+|||++.+..++.++|||||
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  230 (376)
T cd05598         177 WSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV  230 (376)
T ss_pred             ccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeec
Confidence                                 000123579999999999998899999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.47  E-value=1.3e-14  Score=110.98  Aligned_cols=78  Identities=29%  Similarity=0.402  Sum_probs=65.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc-cCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ..+++.++|..+++|++++            |+||+++.++.++++|||+++..... .......+||+.|+|||++.+.
T Consensus       191 i~~aL~ylH~~~IvHrDiK------------P~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  258 (391)
T PHA03212        191 VLRAIQYLHENRIIHRDIK------------AENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARD  258 (391)
T ss_pred             HHHHHHHHHhCCcccCCCC------------hHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCC
Confidence            4678889999999999999            66999999999999999999754322 1122345799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       259 ~~~~~~DiwSl  269 (391)
T PHA03212        259 PYGPAVDIWSA  269 (391)
T ss_pred             CCCcHHHHHHH
Confidence            89999999995

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.47  E-value=1.6e-14  Score=108.58  Aligned_cols=75  Identities=31%  Similarity=0.558  Sum_probs=64.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++.+...   ....+||+.|+|||++.+..
T Consensus       140 i~~aL~~LH~~~ivHrDLk------------p~NILl~~~~~ikL~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~  204 (340)
T PTZ00426        140 IVLIFEYLQSLNIVYRDLK------------PENLLLDKDGFIKMTDFGFAKVVDTR---TYTLCGTPEYIAPEILLNVG  204 (340)
T ss_pred             HHHHHHHHHHCCeEccCCC------------HHHEEECCCCCEEEecCCCCeecCCC---cceecCChhhcCHHHHhCCC
Confidence            4677889999999999999            66999999999999999999865432   23467999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       205 ~~~~~DiwSl  214 (340)
T PTZ00426        205 HGKAADWWTL  214 (340)
T ss_pred             CCccccccch
Confidence            9999999996

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.47  E-value=2.3e-14  Score=109.18  Aligned_cols=78  Identities=32%  Similarity=0.537  Sum_probs=63.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc----------------------
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM----------------------  145 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~----------------------  145 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++.+....                      
T Consensus       110 i~~aL~~LH~~givHrDlK------------p~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (381)
T cd05626         110 LTLAIESVHKMGFIHRDIK------------PDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLW  177 (381)
T ss_pred             HHHHHHHHHhCCeeecCCc------------HHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccc
Confidence            4678889999999999999            669999999999999999975321000                      


Q ss_pred             -------------------------CCCccccccccccccccccCCCCCccceEecC
Q psy3254         146 -------------------------AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       146 -------------------------~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                               ......+||+.|+|||++.+..|+.++|||||
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl  234 (381)
T cd05626         178 DDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV  234 (381)
T ss_pred             ccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence                                     00123579999999999998889999999996

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.47  E-value=2.4e-14  Score=106.48  Aligned_cols=79  Identities=37%  Similarity=0.455  Sum_probs=66.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       106 qi~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  173 (318)
T cd05582         106 ELALALDHLHSLGIIYRDLK------------PENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR  173 (318)
T ss_pred             HHHHHHHHHHHCCEecCCCC------------HHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCC
Confidence            34678889999999999999            669999999999999999997654432333446799999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       174 ~~~~~~Diwsl  184 (318)
T cd05582         174 GHTQSADWWSF  184 (318)
T ss_pred             CCCCccceecc
Confidence            89999999996

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG4645|consensus

Probab=99.47  E-value=1e-14  Score=120.54  Aligned_cols=79  Identities=38%  Similarity=0.597  Sum_probs=65.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe~  162 (177)
                      +..+++.++|..+++|+|+|            +.||+++.+|.+|++|||.|+.+....+    .....+||+.|||||+
T Consensus      1342 qll~gla~LH~~gIVHRDIK------------~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEv 1409 (1509)
T KOG4645|consen 1342 QLLEGLAYLHEHGIVHRDIK------------PANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEV 1409 (1509)
T ss_pred             HHHHHHHHHHhcCceecCCC------------ccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchh
Confidence            34788999999999999999            6699999999999999999987755422    2234689999999999


Q ss_pred             ccC---CCCCccceEecC
Q psy3254         163 IQE---IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~---~~~~~~~Diws~  177 (177)
                      +.+   .+...++||||+
T Consensus      1410 it~t~~kG~~~A~DiWsl 1427 (1509)
T KOG4645|consen 1410 ITGTKGKGHGGAADIWSL 1427 (1509)
T ss_pred             hcccccCCCCcchhhhcc
Confidence            975   345578899996

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.47  E-value=1.9e-14  Score=108.81  Aligned_cols=78  Identities=28%  Similarity=0.430  Sum_probs=65.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++..... .......||..|+|||++.+.
T Consensus       131 qi~~~L~~LH~~~ivHrDlk------------p~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~  197 (359)
T cd07876         131 QMLCGIKHLHSAGIIHRDLK------------PSNIVVKSDCTLKILDFGLARTACTN-FMMTPYVVTRYYRAPEVILGM  197 (359)
T ss_pred             HHHHHHHHHHhCCcccCCCC------------HHHEEECCCCCEEEecCCCccccccC-ccCCCCcccCCCCCchhccCC
Confidence            45678889999999999999            66999999999999999999764332 223345789999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       198 ~~~~~~DiwSl  208 (359)
T cd07876         198 GYKENVDIWSV  208 (359)
T ss_pred             CCCcchhhHHH
Confidence            99999999995

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.47  E-value=3.2e-14  Score=108.05  Aligned_cols=79  Identities=32%  Similarity=0.497  Sum_probs=64.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++....... .....+||+.|+|||++.+
T Consensus       150 qi~~aL~~LH~~~ivHrDLk------------p~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  217 (370)
T cd05596         150 EVVLALDAIHSMGFIHRDVK------------PDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             HHHHHHHHHHHCCeeccCCC------------HHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhcc
Confidence            34678889999999999999            6699999999999999999986543221 2345679999999999865


Q ss_pred             C----CCCccceEecC
Q psy3254         166 I----GYDCVADMWSL  177 (177)
Q Consensus       166 ~----~~~~~~Diws~  177 (177)
                      .    .++.++|||||
T Consensus       218 ~~~~~~~~~~~DiwSl  233 (370)
T cd05596         218 QGGDGYYGRECDWWSV  233 (370)
T ss_pred             CCCCCCCCCceeeeeh
Confidence            3    47889999996

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.46  E-value=1.8e-14  Score=105.35  Aligned_cols=79  Identities=32%  Similarity=0.487  Sum_probs=66.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+...........||+.|+|||++.+.
T Consensus       105 qi~~~l~~lH~~~i~H~dlk------------p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  172 (280)
T cd05608         105 QIISGLEHLHQRRIIYRDLK------------PENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGE  172 (280)
T ss_pred             HHHHHHHHHHHCCcccCCCC------------HHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCC
Confidence            34778889999999999999            669999999999999999997654433333445789999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       173 ~~~~~~Dvwsl  183 (280)
T cd05608         173 EYDFSVDYFAL  183 (280)
T ss_pred             CCCccccHHHH
Confidence            99999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.46  E-value=1.3e-14  Score=109.55  Aligned_cols=78  Identities=28%  Similarity=0.432  Sum_probs=66.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++.++|..+++|++++            |+||+++.++.++++|||+++..... .......||..|+|||++.+.
T Consensus       127 qi~~aL~~LH~~givHrDik------------p~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~  193 (355)
T cd07874         127 QMLCGIKHLHSAGIIHRDLK------------PSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  193 (355)
T ss_pred             HHHHHHHHHHhCCcccCCCC------------hHHEEECCCCCEEEeeCcccccCCCc-cccCCccccCCccCHHHHcCC
Confidence            44678889999999999999            66999999999999999999865432 223345789999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       194 ~~~~~~Diwsl  204 (355)
T cd07874         194 GYKENVDIWSV  204 (355)
T ss_pred             CCCchhhHHHH
Confidence            89999999995

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.46  E-value=1.6e-14  Score=107.57  Aligned_cols=79  Identities=33%  Similarity=0.460  Sum_probs=66.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+|+..|+|||++.+.
T Consensus       104 qi~~~l~~LH~~~ivH~dlk------------p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  171 (318)
T cd05570         104 EIVLGLQFLHERGIIYRDLK------------LDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQ  171 (318)
T ss_pred             HHHHHHHHHHhCCeEccCCC------------HHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCC
Confidence            44688889999999999999            669999999999999999987533222233446799999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       172 ~~~~~~Diwsl  182 (318)
T cd05570         172 PYGPAVDWWAL  182 (318)
T ss_pred             CCCcchhhhhH
Confidence            99999999996

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0585|consensus

Probab=99.46  E-value=1.2e-14  Score=109.45  Aligned_cols=77  Identities=31%  Similarity=0.624  Sum_probs=60.0

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc-----cCCCccccccccccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT-----MAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~g~~~y~aPe~~  163 (177)
                      ..++.|||.++++|||+|            |.|+|++.+|.+|++|||++-.....     .......+||+.++|||.+
T Consensus       220 v~GLEYLH~QgiiHRDIK------------PsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c  287 (576)
T KOG0585|consen  220 VLGLEYLHYQGIIHRDIK------------PSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELC  287 (576)
T ss_pred             HHHHHHHHhcCeeccccc------------hhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhh
Confidence            456779999999999999            66999999999999999999754211     1111225799999999999


Q ss_pred             cCC---CC-CccceEecC
Q psy3254         164 QEI---GY-DCVADMWSL  177 (177)
Q Consensus       164 ~~~---~~-~~~~Diws~  177 (177)
                      .++   .| +.+.||||+
T Consensus       288 ~~~~~~~~~g~a~DiWal  305 (576)
T KOG0585|consen  288 SGGNSFSYSGFALDIWAL  305 (576)
T ss_pred             cCCCCccccchhhhhhhh
Confidence            863   23 457899985

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.46  E-value=3.1e-14  Score=108.34  Aligned_cols=79  Identities=30%  Similarity=0.503  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--------------------  146 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------  146 (177)
                      ....++.++|..+++|+|++            |+||+++.++.++++|||+++.+.....                    
T Consensus       109 ql~~aL~~LH~~givHrDlk------------p~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (377)
T cd05629         109 ECVLAIEAVHKLGFIHRDIK------------PDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNR  176 (377)
T ss_pred             HHHHHHHHHHhCCeeccCCC------------HHHEEECCCCCEEEeecccccccccccccccccccccccccccccccc
Confidence            34678889999999999999            6799999999999999999863211000                    


Q ss_pred             ---------------------------CCccccccccccccccccCCCCCccceEecC
Q psy3254         147 ---------------------------KRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       147 ---------------------------~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                                 .....+||+.|+|||++.+..|+.++|||||
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  234 (377)
T cd05629         177 NSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL  234 (377)
T ss_pred             cccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence                                       0012469999999999998889999999996

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.46  E-value=1.4e-14  Score=113.74  Aligned_cols=79  Identities=33%  Similarity=0.477  Sum_probs=66.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....+++++|..+++|++++            |+||+++.++.++++|||+++.+...  .......+||+.|+|||++.
T Consensus       151 qll~aL~~lH~~~IiHrDLK------------P~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~  218 (496)
T PTZ00283        151 QVLLAVHHVHSKHMIHRDIK------------SANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWR  218 (496)
T ss_pred             HHHHHHHHHHhCCEecCCCC------------HHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhC
Confidence            44678889999999999999            66999999999999999999865432  11234567999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       219 ~~~~s~k~DVwSl  231 (496)
T PTZ00283        219 RKPYSKKADMFSL  231 (496)
T ss_pred             CCCCCcHHHHHHH
Confidence            8889999999995

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.45  E-value=1.9e-14  Score=113.26  Aligned_cols=79  Identities=28%  Similarity=0.402  Sum_probs=66.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.|+|..+++|+|++            +.||+++.++.++|+|||+++.+..... .....+||..|+|||++.+
T Consensus       275 ql~~aL~yLH~~gIiHrDLK------------P~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~  342 (501)
T PHA03210        275 QLLCAVEYIHDKKLIHRDIK------------LENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG  342 (501)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC
Confidence            34678889999999999999            6699999999999999999987654322 2334679999999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       343 ~~~~~~~DiwSl  354 (501)
T PHA03210        343 DGYCEITDIWSC  354 (501)
T ss_pred             CCCCcHHHHHHH
Confidence            899999999995

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.45  E-value=1.7e-14  Score=105.91  Aligned_cols=79  Identities=27%  Similarity=0.438  Sum_probs=65.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            |+|++++.++.++++|||+++.............|++.|+|||++.+ 
T Consensus       111 qi~~aL~~LH~~~ivH~dlk------------p~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (288)
T cd07871         111 QLLRGLSYCHKRKILHRDLK------------PQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS  178 (288)
T ss_pred             HHHHHHHHHHhCCcccCCCC------------HHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCC
Confidence            34678889999999999999            66999999999999999999765433223344578999999999876 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       179 ~~~~~~~Diwsl  190 (288)
T cd07871         179 TEYSTPIDMWGV  190 (288)
T ss_pred             cccCcHHHHHHH
Confidence            568999999985

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.45  E-value=1.8e-14  Score=107.95  Aligned_cols=79  Identities=30%  Similarity=0.461  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|+|++            ++||+++.++.++++|||+++.+.....  ..+...++..|+|||++.
T Consensus       182 qi~~aL~~LH~~~ivHrDiK------------p~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  249 (338)
T cd05102         182 QVARGMEFLASRKCIHRDLA------------ARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIF  249 (338)
T ss_pred             HHHHHHHHHHHCCEECCCCc------------cceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhh
Confidence            45788899999999999999            6699999999999999999986533211  122345677899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       250 ~~~~~~~sDiwsl  262 (338)
T cd05102         250 DKVYTTQSDVWSF  262 (338)
T ss_pred             cCCCCcccCHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.45  E-value=1.5e-14  Score=106.87  Aligned_cols=79  Identities=25%  Similarity=0.427  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++.............||+.|+|||++.+ 
T Consensus       111 qi~~al~~lH~~~ivH~dlk------------p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (303)
T cd07869         111 QLLRGLSYIHQRYILHRDLK------------PQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGS  178 (303)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCC
Confidence            45788899999999999999            66999999999999999998754433223344678999999999876 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       179 ~~~~~~~Diwsl  190 (303)
T cd07869         179 TEYSTCLDMWGV  190 (303)
T ss_pred             CCCCcHHHHHHH
Confidence            458889999995

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.45  E-value=1.9e-14  Score=108.96  Aligned_cols=78  Identities=28%  Similarity=0.432  Sum_probs=66.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|..+++|++++            |+||+++.++.++++|||+++..... .......||..|+|||++.+.
T Consensus       134 qi~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~kL~DfG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~  200 (364)
T cd07875         134 QMLCGIKHLHSAGIIHRDLK------------PSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  200 (364)
T ss_pred             HHHHHHHHHhhCCeecCCCC------------HHHEEECCCCcEEEEeCCCccccCCC-CcccCCcccCCcCCHHHHhCC
Confidence            34678889999999999999            66999999999999999999865432 222345789999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       201 ~~~~~~DiwSl  211 (364)
T cd07875         201 GYKENVDIWSV  211 (364)
T ss_pred             CCCchhhHHhH
Confidence            99999999995

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0671|consensus

Probab=99.44  E-value=1.5e-14  Score=106.09  Aligned_cols=123  Identities=25%  Similarity=0.360  Sum_probs=88.5

Q ss_pred             HHHHHhcccCCCCCCCHHhhh------cCcc----------cccCCCCCCCCCCCCCCCCCCcchHHHHhhhchhhHHHH
Q psy3254          40 DFVSRCLVKNPEERATASEML------NHEF----------IQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHR  103 (177)
Q Consensus        40 ~~i~~~l~~~p~~R~~~~~~l------~h~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~  103 (177)
                      +.++++...||....-+.++.      .|.-          +.....++....+...++..+++..+.+.++|..+++|.
T Consensus       137 ~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HT  216 (415)
T KOG0671|consen  137 EVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHT  216 (415)
T ss_pred             HHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeec
Confidence            344566677777665544442      2221          111223344445556667778888999999999999999


Q ss_pred             HhhhchHHHHHHHHhhcceEeCC--------------------CCCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254         104 MANLDCEMEREIEQLRRNILLNT--------------------EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus       104 ~~~~~~~~~~~i~~l~~nil~~~--------------------~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      |+|            |+||++..                    +..+++.|||.|+.-.   +...+.+.|..|.|||++
T Consensus       217 DLK------------PENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~---e~hs~iVsTRHYRAPEVi  281 (415)
T KOG0671|consen  217 DLK------------PENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH---EHHSTIVSTRHYRAPEVI  281 (415)
T ss_pred             CCC------------hheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceec---cCcceeeeccccCCchhe
Confidence            999            77998832                    2358999999987533   234678899999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+.+++.++||||+
T Consensus       282 LgLGwS~pCDvWSi  295 (415)
T KOG0671|consen  282 LGLGWSQPCDVWSI  295 (415)
T ss_pred             eccCcCCccCceee
Confidence            99999999999995

>KOG0611|consensus

Probab=99.44  E-value=2.7e-14  Score=106.12  Aligned_cols=77  Identities=30%  Similarity=0.546  Sum_probs=66.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      +..++.|+|..+++|+|+++            +||+++.++++|++|||++..+.+. ....++||++-|.+||++.+.+
T Consensus       162 IvSAVhYCHknrVvHRDLKL------------ENILLD~N~NiKIADFGLSNly~~~-kfLqTFCGSPLYASPEIvNG~P  228 (668)
T KOG0611|consen  162 IVSAVHYCHKNRVVHRDLKL------------ENILLDQNNNIKIADFGLSNLYADK-KFLQTFCGSPLYASPEIVNGTP  228 (668)
T ss_pred             HHHHHHHHhhccceecccch------------hheeecCCCCeeeeccchhhhhccc-cHHHHhcCCcccCCccccCCCC
Confidence            35778899999999999995            5999999999999999999766543 4567899999999999999988


Q ss_pred             CC-ccceEecC
Q psy3254         168 YD-CVADMWSL  177 (177)
Q Consensus       168 ~~-~~~Diws~  177 (177)
                      |. +.+|.||+
T Consensus       229 Y~GPEVDsWsL  239 (668)
T KOG0611|consen  229 YKGPEVDSWSL  239 (668)
T ss_pred             CCCCccchhhH
Confidence            85 67999996

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.44  E-value=5.4e-14  Score=105.24  Aligned_cols=79  Identities=29%  Similarity=0.479  Sum_probs=64.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....+++++|..+++|++++            ++||+++.++.++++|||+++.+..... .....+||+.|+|||++.+
T Consensus       110 qi~~~L~~lH~~~iiHrDlk------------p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05624         110 EMVLAIHSIHQLHYVHRDIK------------PDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQA  177 (331)
T ss_pred             HHHHHHHHHHHCCeeeccCc------------hHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhc
Confidence            34678889999999999999            6699999999999999999976543322 1233579999999999875


Q ss_pred             -----CCCCccceEecC
Q psy3254         166 -----IGYDCVADMWSL  177 (177)
Q Consensus       166 -----~~~~~~~Diws~  177 (177)
                           ..++.++|||||
T Consensus       178 ~~~~~~~~~~~~DiwSl  194 (331)
T cd05624         178 MEDGMGKYGPECDWWSL  194 (331)
T ss_pred             cccCCCCCCCcccEEee
Confidence                 467889999996

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.44  E-value=2.1e-14  Score=105.53  Aligned_cols=76  Identities=42%  Similarity=0.623  Sum_probs=65.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++.....   ....+||+.|+|||++.+.
T Consensus       109 qi~~~l~~lH~~~i~H~dlk------------p~NIli~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~  173 (291)
T cd05612         109 EIVCALEYLHSKEIVYRDLK------------PENILLDKEGHIKLTDFGFAKKLRDR---TWTLCGTPEYLAPEVIQSK  173 (291)
T ss_pred             HHHHHHHHHHHCCeeecCCC------------HHHeEECCCCCEEEEecCcchhccCC---cccccCChhhcCHHHHcCC
Confidence            34678889999999999999            66999999999999999999765432   2345799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       174 ~~~~~~DiwSl  184 (291)
T cd05612         174 GHNKAVDWWAL  184 (291)
T ss_pred             CCCchhhHHHH
Confidence            89999999985

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.43  E-value=3.2e-14  Score=105.63  Aligned_cols=79  Identities=25%  Similarity=0.438  Sum_probs=63.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe----CCCCCeEEeeeecccccccccC---CCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL----NTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~----~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~a  159 (177)
                      +...+++++|..+++|+|++            |+||++    +.++.++++|||+++.......   .....+||+.|+|
T Consensus       116 qi~~al~~LH~~~ivHrDlk------------p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07868         116 QILDGIHYLHANWVLHRDLK------------PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             HHHHHHHHHHhCCEEcCCCC------------HHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccC
Confidence            44688899999999999999            679999    4567899999999986543221   2234678999999


Q ss_pred             cccccC-CCCCccceEecC
Q psy3254         160 PEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~-~~~~~~~Diws~  177 (177)
                      ||++.+ ..|+.++||||+
T Consensus       184 PE~~~~~~~~~~~~Diwsl  202 (317)
T cd07868         184 PELLLGARHYTKAIDIWAI  202 (317)
T ss_pred             CHHHcCCCCcCchhhHHHH
Confidence            999977 458899999995

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG1026|consensus

Probab=99.43  E-value=1.1e-14  Score=115.74  Aligned_cols=81  Identities=26%  Similarity=0.384  Sum_probs=66.4

Q ss_pred             CcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccc--cccCCCcccccccccccccc
Q psy3254          85 GFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        85 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~--~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ..++..+|.||+...++|||+.            .+|.|++.+..+||+|||++|.+-  +.........-..+|||||.
T Consensus       609 A~QIAaGM~YLs~~~FVHRDLA------------TRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEs  676 (774)
T KOG1026|consen  609 ATQIAAGMEYLSSHHFVHRDLA------------TRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPES  676 (774)
T ss_pred             HHHHHHHHHHHHhCcccccchh------------hhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHH
Confidence            3455788889999999999998            789999999999999999999642  22222223334679999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +..+.|+++||||||
T Consensus       677 Ily~kFTteSDVWs~  691 (774)
T KOG1026|consen  677 ILYGKFTTESDVWSF  691 (774)
T ss_pred             hhcCcccchhhhhhh
Confidence            999999999999996

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.43  E-value=6e-14  Score=105.02  Aligned_cols=79  Identities=30%  Similarity=0.487  Sum_probs=63.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCcccccccccccccccc-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQ-  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~-  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+..... .....+||+.|+|||++. 
T Consensus       110 qi~~al~~lH~~~iiHrDlk------------p~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (332)
T cd05623         110 EMVIAIDSVHQLHYVHRDIK------------PDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA  177 (332)
T ss_pred             HHHHHHHHHHHCCeEecCCC------------HHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhc
Confidence            34677889999999999999            6699999999999999999876533222 223357999999999986 


Q ss_pred             ----CCCCCccceEecC
Q psy3254         165 ----EIGYDCVADMWSL  177 (177)
Q Consensus       165 ----~~~~~~~~Diws~  177 (177)
                          ...++.++|||||
T Consensus       178 ~~~~~~~~~~~~DvwSl  194 (332)
T cd05623         178 MEDGKGKYGPECDWWSL  194 (332)
T ss_pred             cccCCCCCCCcCCEEee
Confidence                3458889999996

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.43  E-value=4.6e-14  Score=103.35  Aligned_cols=78  Identities=35%  Similarity=0.500  Sum_probs=65.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |.|++++.++.++++|||+++..... .......||..|+|||++.+.
T Consensus       116 qi~~al~~lH~~~ivH~dik------------p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  182 (288)
T cd07863         116 QFLRGLDFLHANCIVHRDLK------------PENILVTSGGQVKLADFGLARIYSCQ-MALTPVVVTLWYRAPEVLLQS  182 (288)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEECCCCCEEECccCccccccCc-ccCCCccccccccCchHhhCC
Confidence            34678889999999999999            66999999999999999999865432 122345689999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       183 ~~~~~~Diwsl  193 (288)
T cd07863         183 TYATPVDMWSV  193 (288)
T ss_pred             CCCCcchhhhH
Confidence            89999999995

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.43  E-value=7.2e-14  Score=104.45  Aligned_cols=79  Identities=34%  Similarity=0.510  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCcccccccccccccccc-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQ-  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~-  164 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.+..... ......||+.|+|||++. 
T Consensus       110 qi~~aL~~lH~~~i~H~Dlk------------p~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (330)
T cd05601         110 ELVLAIHSVHQMGYVHRDIK------------PENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTT  177 (330)
T ss_pred             HHHHHHHHHHHCCeEcccCc------------hHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhcc
Confidence            45788899999999999999            6699999999999999999986543322 122357899999999986 


Q ss_pred             -----CCCCCccceEecC
Q psy3254         165 -----EIGYDCVADMWSL  177 (177)
Q Consensus       165 -----~~~~~~~~Diws~  177 (177)
                           ...++.++|||||
T Consensus       178 ~~~~~~~~~~~~~Diwsl  195 (330)
T cd05601         178 MNGDGKGTYGVECDWWSL  195 (330)
T ss_pred             ccccccCCCCCcceeecc
Confidence                 4567889999996

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.43  E-value=3e-14  Score=111.58  Aligned_cols=79  Identities=34%  Similarity=0.541  Sum_probs=66.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++.+.....  .....+||+.|+|||++.
T Consensus       177 qi~~aL~~lH~~~ivHrDlk------------p~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~  244 (478)
T PTZ00267        177 QIVLALDEVHSRKMMHRDLK------------SANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWE  244 (478)
T ss_pred             HHHHHHHHHHhCCEEECCcC------------HHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhC
Confidence            34577889999999999999            6699999999999999999987643221  234567999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       245 ~~~~~~~~Dv~sl  257 (478)
T PTZ00267        245 RKRYSKKADMWSL  257 (478)
T ss_pred             CCCCCcHHhHHHH
Confidence            8889999999985

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.42  E-value=2.2e-14  Score=106.02  Aligned_cols=79  Identities=27%  Similarity=0.331  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||+++.+....  ...+...++..|+|||++.
T Consensus       146 ~i~~al~~lH~~~ivH~dlk------------p~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (304)
T cd05096         146 QIASGMKYLSSLNFVHRDLA------------TRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL  213 (304)
T ss_pred             HHHHHHHHHHHCCccccCcc------------hhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh
Confidence            34678889999999999999            669999999999999999997653321  1123345678899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       214 ~~~~~~~~Dv~sl  226 (304)
T cd05096         214 MGKFTTASDVWAF  226 (304)
T ss_pred             cCCCCchhhhHHH
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.42  E-value=2.9e-14  Score=110.58  Aligned_cols=78  Identities=28%  Similarity=0.459  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            |+||+++.++ .++++|||+++.+... ......+||+.|+|||++.+
T Consensus       178 qi~~gL~yLH~~~IiHrDLK------------p~NILl~~~~~~vkL~DFGla~~~~~~-~~~~~~~~t~~y~aPE~~~~  244 (440)
T PTZ00036        178 QLCRALAYIHSKFICHRDLK------------PQNLLIDPNTHTLKLCDFGSAKNLLAG-QRSVSYICSRFYRAPELMLG  244 (440)
T ss_pred             HHHHHHHHHHHCCEecCCcC------------HHHEEEcCCCCceeeeccccchhccCC-CCcccCCCCcCccCHHHhcC
Confidence            44678899999999999999            6699998665 6999999999866432 22334578999999999876


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..|+.++|||||
T Consensus       245 ~~~~~~~~DiwSl  257 (440)
T PTZ00036        245 ATNYTTHIDLWSL  257 (440)
T ss_pred             CCCCCcHHHHHHH
Confidence             468999999995

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.41  E-value=3.8e-14  Score=106.07  Aligned_cols=79  Identities=27%  Similarity=0.439  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      ...+++.++|..+++|++++            ++||+++.++.++++|||+++.......   .....+||..|+|||++
T Consensus       111 qi~~aL~~LH~~~ivH~dlk------------p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  178 (338)
T cd07859         111 QLLRALKYIHTANVFHRDLK------------PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC  178 (338)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHH
Confidence            34688899999999999999            6699999999999999999976432211   12345799999999998


Q ss_pred             cC--CCCCccceEecC
Q psy3254         164 QE--IGYDCVADMWSL  177 (177)
Q Consensus       164 ~~--~~~~~~~Diws~  177 (177)
                      .+  ..++.++|||||
T Consensus       179 ~~~~~~~~~~~DvwSl  194 (338)
T cd07859         179 GSFFSKYTPAIDIWSI  194 (338)
T ss_pred             hccccccCchhHHHHH
Confidence            65  578999999995

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.41  E-value=4.1e-14  Score=110.03  Aligned_cols=78  Identities=26%  Similarity=0.344  Sum_probs=65.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|+++|            ++||+++.++.++++|||+++.......  .....+||..|+|||++.+
T Consensus       269 i~~aL~yLH~~gIvHrDLK------------P~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~  336 (461)
T PHA03211        269 LLSAIDYIHGEGIIHRDIK------------TENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAG  336 (461)
T ss_pred             HHHHHHHHHHCCEEECcCC------------HHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcC
Confidence            3577889999999999999            6699999999999999999976533211  1223579999999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       337 ~~~~~~sDvwSl  348 (461)
T PHA03211        337 DPYTPSVDIWSA  348 (461)
T ss_pred             CCCCchHHHHHH
Confidence            889999999995

>KOG0666|consensus

Probab=99.41  E-value=3.2e-14  Score=102.41  Aligned_cols=85  Identities=24%  Similarity=0.393  Sum_probs=70.2

Q ss_pred             CCCCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC----CCeEEeeeecccccccccC---CCccccc
Q psy3254          81 PSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE----GHAKLADFGVAGQLTDTMA---KRNTVIG  153 (177)
Q Consensus        81 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~----~~~~l~dfg~~~~~~~~~~---~~~~~~g  153 (177)
                      +...-++...+++|+|..-++|||+|            |.||++..+    |.+|++|+|++|.+.++..   .....+.
T Consensus       134 vKsilwQil~Gv~YLH~NWvlHRDLK------------PaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVV  201 (438)
T KOG0666|consen  134 VKSILWQILDGVHYLHSNWVLHRDLK------------PANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVV  201 (438)
T ss_pred             HHHHHHHHHhhhHHHhhhheeeccCC------------cceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEE
Confidence            34445667899999999999999999            559999877    8999999999998765433   2345678


Q ss_pred             cccccccccccC-CCCCccceEecC
Q psy3254         154 TPFWMAPEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       154 ~~~y~aPe~~~~-~~~~~~~Diws~  177 (177)
                      |.+|.|||.+.+ ..|+.++||||.
T Consensus       202 TiWYRAPELLLGa~hYT~AiDvWAi  226 (438)
T KOG0666|consen  202 TIWYRAPELLLGARHYTKAIDVWAI  226 (438)
T ss_pred             EEEecChHHhcccccccchhhhHHH
Confidence            999999999998 569999999983

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.41  E-value=6.5e-14  Score=105.89  Aligned_cols=78  Identities=28%  Similarity=0.350  Sum_probs=65.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++..... .......||..|+|||++.+.
T Consensus       165 qi~~aL~~LH~~~ivHrDlk------------p~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  231 (357)
T PHA03209        165 QILEGLRYLHAQRIIHRDVK------------TENIFINDVDQVCIGDLGAAQFPVVA-PAFLGLAGTVETNAPEVLARD  231 (357)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHEEECCCCCEEEecCccccccccC-cccccccccccccCCeecCCC
Confidence            34678889999999999999            66999999999999999998753322 122345799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       232 ~~~~~~DiwSl  242 (357)
T PHA03209        232 KYNSKADIWSA  242 (357)
T ss_pred             CCCchhhHHHH
Confidence            89999999985

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.41  E-value=6e-14  Score=105.86  Aligned_cols=79  Identities=33%  Similarity=0.506  Sum_probs=63.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.+..........+||..|+|||++.. 
T Consensus       176 qi~~aL~~LH~~~ivHrDlk------------p~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  243 (353)
T PLN00034        176 QILSGIAYLHRRHIVHRDIK------------PSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTD  243 (353)
T ss_pred             HHHHHHHHHHHCCEeecCCC------------HHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccc
Confidence            34678889999999999999            66999999999999999999876543333345679999999998843 


Q ss_pred             ----CCCCccceEecC
Q psy3254         166 ----IGYDCVADMWSL  177 (177)
Q Consensus       166 ----~~~~~~~Diws~  177 (177)
                          ...+.++|||||
T Consensus       244 ~~~~~~~~~~~Dvwsl  259 (353)
T PLN00034        244 LNHGAYDGYAGDIWSL  259 (353)
T ss_pred             cccCcCCCcchhHHHH
Confidence                224568999986

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.41  E-value=8.2e-14  Score=104.66  Aligned_cols=76  Identities=26%  Similarity=0.502  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.....   ....+||+.|+|||++.+ 
T Consensus       126 qi~~aL~~LH~~~ivHrdik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~  190 (343)
T cd07878         126 QLLRGLKYIHSAGIIHRDLK------------PSNVAVNEDCELRILDFGLARQADDE---MTGYVATRWYRAPEIMLNW  190 (343)
T ss_pred             HHHHHHHHHHHCCeecccCC------------hhhEEECCCCCEEEcCCccceecCCC---cCCccccccccCchHhcCC
Confidence            44788889999999999999            66999999999999999999865432   234578999999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       191 ~~~~~~~Diwsl  202 (343)
T cd07878         191 MHYNQTVDIWSV  202 (343)
T ss_pred             ccCCchhhhHhH
Confidence            568899999995

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.40  E-value=8.2e-14  Score=101.99  Aligned_cols=79  Identities=27%  Similarity=0.483  Sum_probs=65.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+.... .......|+..|+|||++.+
T Consensus       108 qi~~~L~~lH~~~i~H~dlk------------p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (287)
T cd07848         108 QLIKAIHWCHKNDIVHRDIK------------PENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG  175 (287)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcC
Confidence            34678889999999999999            669999999999999999998754321 12234578999999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       176 ~~~~~~~Diwsl  187 (287)
T cd07848         176 APYGKAVDMWSV  187 (287)
T ss_pred             CCCCCchhHHhH
Confidence            889999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=1.3e-13  Score=103.16  Aligned_cols=79  Identities=32%  Similarity=0.481  Sum_probs=63.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      +...++.++|..+++|++++            +.||+++.++.++++|||++..+..... .....+||+.|+|||++..
T Consensus       110 qi~~~l~~lH~~~ivH~dlk------------p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05597         110 EMVLAIDSVHQLGYVHRDIK------------PDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQA  177 (331)
T ss_pred             HHHHHHHHHHhCCeEECCCC------------HHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhh
Confidence            34678889999999999999            6699999999999999999876543222 2223569999999999863


Q ss_pred             -----CCCCccceEecC
Q psy3254         166 -----IGYDCVADMWSL  177 (177)
Q Consensus       166 -----~~~~~~~Diws~  177 (177)
                           ..++.++||||+
T Consensus       178 ~~~~~~~~~~~~Diwsl  194 (331)
T cd05597         178 MEDGKGRYGPECDWWSL  194 (331)
T ss_pred             ccccccCCCCcceeehh
Confidence                 457889999996

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PTZ00284 protein kinase; Provisional

Probab=99.39  E-value=6e-14  Score=109.61  Aligned_cols=76  Identities=25%  Similarity=0.441  Sum_probs=62.2

Q ss_pred             chHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCC----------------CeEEeeeecccccccccCCCc
Q psy3254          87 CDFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEG----------------HAKLADFGVAGQLTDTMAKRN  149 (177)
Q Consensus        87 ~~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~----------------~~~l~dfg~~~~~~~~~~~~~  149 (177)
                      ....++.|+|. .+++|+|+|            ++||+++.++                .+|++|||.+....   ....
T Consensus       239 qi~~aL~yLH~~~gIiHrDlK------------P~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~  303 (467)
T PTZ00284        239 QTGVALDYFHTELHLMHTDLK------------PENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER---HSRT  303 (467)
T ss_pred             HHHHHHHHHHhcCCeecCCCC------------HHHEEEecCCcccccccccccCCCCceEEECCCCccccCc---cccc
Confidence            44678889997 599999999            6699998665                49999999875422   1234


Q ss_pred             cccccccccccccccCCCCCccceEecC
Q psy3254         150 TVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       150 ~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ..+||+.|+|||++.+..|+.++|||||
T Consensus       304 ~~~gt~~Y~APE~~~~~~~~~~~DiwSl  331 (467)
T PTZ00284        304 AIVSTRHYRSPEVVLGLGWMYSTDMWSM  331 (467)
T ss_pred             cccCCccccCcHHhhcCCCCcHHHHHHH
Confidence            5689999999999999899999999995

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.39  E-value=8.9e-14  Score=106.37  Aligned_cols=78  Identities=29%  Similarity=0.359  Sum_probs=65.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++.+.....  ......||..|+|||++..
T Consensus       194 l~~aL~~LH~~givHrDlk------------p~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  261 (392)
T PHA03207        194 LLEALAYLHGRGIIHRDVK------------TENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLAL  261 (392)
T ss_pred             HHHHHHHHHHCCccccCCC------------HHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcC
Confidence            4678889999999999999            6699999999999999999976543211  1234579999999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       262 ~~~~~~~Dvwsl  273 (392)
T PHA03207        262 DPYCAKTDIWSA  273 (392)
T ss_pred             CCCCchhhHHHH
Confidence            889999999995

>KOG0194|consensus

Probab=99.39  E-value=1.2e-13  Score=105.92  Aligned_cols=77  Identities=26%  Similarity=0.407  Sum_probs=62.2

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..+++|+|...++|||+.            .+|+|+..++.+|++|||+++............--...|+|||.+....|
T Consensus       272 A~Gl~YLh~k~~IHRDIA------------ARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~  339 (474)
T KOG0194|consen  272 ARGLEYLHSKNCIHRDIA------------ARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIF  339 (474)
T ss_pred             HhHHHHHHHCCCcchhHh------------HHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCcc
Confidence            677889999999999998            77999999999999999999764422111111124578999999999999


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.++|||||
T Consensus       340 s~kTDV~sf  348 (474)
T KOG0194|consen  340 SFKTDVWSF  348 (474)
T ss_pred             ccccchhhe
Confidence            999999996

>KOG0587|consensus

Probab=99.39  E-value=1.8e-13  Score=109.45  Aligned_cols=77  Identities=47%  Similarity=0.790  Sum_probs=66.1

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC---
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE---  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~---  165 (177)
                      ..++..+|...++|+|++-.            ||++..++.+|++|||++..+......+++.+||+.|||||++..   
T Consensus       133 lrgl~HLH~nkviHRDikG~------------NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~  200 (953)
T KOG0587|consen  133 LRGLAHLHNNKVIHRDIKGQ------------NVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDES  200 (953)
T ss_pred             HHHHHHHhhcceeeecccCc------------eEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccC
Confidence            34555778888999998844            999999999999999999999888788889999999999999963   


Q ss_pred             --CCCCccceEecC
Q psy3254         166 --IGYDCVADMWSL  177 (177)
Q Consensus       166 --~~~~~~~Diws~  177 (177)
                        ..|+..+|+|||
T Consensus       201 ~d~tyd~R~D~WsL  214 (953)
T KOG0587|consen  201 PDATYDYRSDLWSL  214 (953)
T ss_pred             CCCCcccccchhhc
Confidence              347788999996

>KOG0612|consensus

Probab=99.39  E-value=8.3e-14  Score=113.96  Aligned_cols=76  Identities=36%  Similarity=0.544  Sum_probs=64.1

Q ss_pred             HHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc-cCCCcccccccccccccccc----
Q psy3254          90 EFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQ----  164 (177)
Q Consensus        90 ~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~g~~~y~aPe~~~----  164 (177)
                      -+++-+|..+.+|||+|+            .|+|++..|+++++|||.|-.+... .......+|||-|.+||++.    
T Consensus       186 lAldslH~mgyVHRDiKP------------DNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~  253 (1317)
T KOG0612|consen  186 LALDSLHSMGYVHRDIKP------------DNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGD  253 (1317)
T ss_pred             HHHHHHHhccceeccCCc------------ceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcC
Confidence            456678999999999994            5999999999999999999777643 33456689999999999996    


Q ss_pred             C-CCCCccceEecC
Q psy3254         165 E-IGYDCVADMWSL  177 (177)
Q Consensus       165 ~-~~~~~~~Diws~  177 (177)
                      + +.|+..+|+||+
T Consensus       254 ~~g~yG~ecDwWSl  267 (1317)
T KOG0612|consen  254 GKGEYGRECDWWSL  267 (1317)
T ss_pred             CccccCCccchhhh
Confidence            3 469999999995

>KOG0662|consensus

Probab=99.38  E-value=1.2e-13  Score=92.46  Aligned_cols=78  Identities=29%  Similarity=0.434  Sum_probs=67.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|...+.|++++            |+|++++.+|..|++|||+++.++-+....+..+.|.+|.+|.++.+.
T Consensus       109 qllrgl~fchshnvlhrdlk------------pqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfga  176 (292)
T KOG0662|consen  109 QLLRGLGFCHSHNVLHRDLK------------PQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA  176 (292)
T ss_pred             HHHhhhhhhhhhhhhhccCC------------cceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeee
Confidence            44677779999999999999            779999999999999999999887665555566789999999999874


Q ss_pred             -CCCccceEec
Q psy3254         167 -GYDCVADMWS  176 (177)
Q Consensus       167 -~~~~~~Diws  176 (177)
                       -|+++.|+||
T Consensus       177 kly~tsidmws  187 (292)
T KOG0662|consen  177 KLYSTSIDMWS  187 (292)
T ss_pred             ehhccchHhhh
Confidence             5899999998

>KOG0604|consensus

Probab=99.37  E-value=3.1e-13  Score=96.86  Aligned_cols=76  Identities=34%  Similarity=0.519  Sum_probs=63.5

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ..++.|+|...|.|||+|            |+|+|...   +..+|++|||+|+.-... ....+.|-|++|.|||++..
T Consensus       171 ~~Av~~lH~~nIAHRDlK------------pENLLyt~t~~na~lKLtDfGFAK~t~~~-~~L~TPc~TPyYvaPevlg~  237 (400)
T KOG0604|consen  171 GLAVRYLHSMNIAHRDLK------------PENLLYTTTSPNAPLKLTDFGFAKETQEP-GDLMTPCFTPYYVAPEVLGP  237 (400)
T ss_pred             HHHHHHHHhcchhhccCC------------hhheeeecCCCCcceEecccccccccCCC-ccccCCcccccccCHHHhCc
Confidence            466779999999999999            77999854   457999999999875543 33456788999999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+..+|+||+
T Consensus       238 eKydkscdmwSl  249 (400)
T KOG0604|consen  238 EKYDKSCDMWSL  249 (400)
T ss_pred             hhcCCCCCccch
Confidence            899999999995

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.37  E-value=1.2e-13  Score=102.42  Aligned_cols=79  Identities=25%  Similarity=0.438  Sum_probs=63.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe----CCCCCeEEeeeecccccccccC---CCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL----NTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~----~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~a  159 (177)
                      ....++.++|..+++|++++            |+||++    +.++.++++|||+++.......   ......||..|+|
T Consensus       116 qi~~aL~~lH~~~ivH~Dlk------------p~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07867         116 QILDGIHYLHANWVLHRDLK------------PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             HHHHHHHHHHhCCEEcCCCC------------HHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccC
Confidence            44678899999999999999            669999    4567899999999986543221   2234578999999


Q ss_pred             cccccC-CCCCccceEecC
Q psy3254         160 PEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~-~~~~~~~Diws~  177 (177)
                      ||++.+ ..++.++|||||
T Consensus       184 PE~~~~~~~~~~~~DiwSl  202 (317)
T cd07867         184 PELLLGARHYTKAIDIWAI  202 (317)
T ss_pred             cHHhcCCCccCcHHHHHhH
Confidence            999976 458899999995

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0665|consensus

Probab=99.37  E-value=1.4e-13  Score=99.12  Aligned_cols=82  Identities=28%  Similarity=0.383  Sum_probs=69.3

Q ss_pred             CCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          83 GGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        83 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ...++...+++++|..+++|||++            |+|+++..+..+|+.|||+++.-... -..+..+.|..|.|||+
T Consensus       122 ~i~yq~~~~ik~lhs~~IihRdLk------------Psnivv~~~~~lKi~dfg~ar~e~~~-~~mtpyVvtRyyrapev  188 (369)
T KOG0665|consen  122 YILYQMLCGIKHLHSAGIIHRDLK------------PSNIVVNSDCTLKILDFGLARTEDTD-FMMTPYVVTRYYRAPEV  188 (369)
T ss_pred             HHHHHHHHHHHHHHhcceeecccC------------cccceecchhheeeccchhhcccCcc-cccCchhheeeccCchh
Confidence            334556778889999999999999            67999999999999999999764332 34556789999999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..|...+||||+
T Consensus       189 il~~~~ke~vdiwSv  203 (369)
T KOG0665|consen  189 ILGMGYKENVDIWSV  203 (369)
T ss_pred             eeccCCcccchhhhh
Confidence            999889999999984

>KOG0580|consensus

Probab=99.36  E-value=9.6e-14  Score=96.37  Aligned_cols=77  Identities=32%  Similarity=0.500  Sum_probs=67.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.|+|...++||+++            |+|+|++..+.++++|||.+..-.  ...+.+.|||.-|.+||...+.
T Consensus       132 q~A~Al~y~h~k~VIhRdiK------------penlLlg~~~~lkiAdfGwsV~~p--~~kR~tlcgt~dyl~pEmv~~~  197 (281)
T KOG0580|consen  132 QLANALLYCHLKRVIHRDIK------------PENLLLGSAGELKIADFGWSVHAP--SNKRKTLCGTLDYLPPEMVEGR  197 (281)
T ss_pred             HHHHHHHHhccCCcccCCCC------------HHHhccCCCCCeeccCCCceeecC--CCCceeeecccccCCHhhcCCC
Confidence            44678889999999999999            779999999999999999986433  3456789999999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++..+|+|++
T Consensus       198 ~hd~~Vd~w~l  208 (281)
T KOG0580|consen  198 GHDKFVDLWSL  208 (281)
T ss_pred             CccchhhHHHH
Confidence            99999999984

>KOG0669|consensus

Probab=99.36  E-value=3.7e-13  Score=94.52  Aligned_cols=76  Identities=25%  Similarity=0.501  Sum_probs=63.2

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc---c-CCCcccccccccccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT---M-AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~---~-~~~~~~~g~~~y~aPe~~~  164 (177)
                      .+++.++|+..++|||.+            +.|++++.+|.++++|||+++.+...   . ...+.++.|.+|.+||.+.
T Consensus       134 m~GL~~iHr~kilHRDmK------------aaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllL  201 (376)
T KOG0669|consen  134 MNGLYYIHRNKILHRDMK------------AANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLL  201 (376)
T ss_pred             HHHHHHHHHhhHHhhccc------------HhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhh
Confidence            567779999999999999            55999999999999999999866432   1 1234467899999999998


Q ss_pred             C-CCCCccceEec
Q psy3254         165 E-IGYDCVADMWS  176 (177)
Q Consensus       165 ~-~~~~~~~Diws  176 (177)
                      + ..|+++.|||+
T Consensus       202 G~r~yg~~iDiWg  214 (376)
T KOG0669|consen  202 GDREYGPPIDIWG  214 (376)
T ss_pred             cccccCCcchhHh
Confidence            7 57999999995

>KOG1035|consensus

Probab=99.36  E-value=1.8e-13  Score=112.73  Aligned_cols=77  Identities=31%  Similarity=0.593  Sum_probs=64.1

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccc----------c--------ccCCCcc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLT----------D--------TMAKRNT  150 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~----------~--------~~~~~~~  150 (177)
                      .+++.|+|.++++|||+|            |.||+++.++.+|++|||++....          .        .....+.
T Consensus       707 lEGLaYIH~~giIHRDLK------------P~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts  774 (1351)
T KOG1035|consen  707 LEGLAYIHDQGIIHRDLK------------PRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTS  774 (1351)
T ss_pred             HHHHHHHHhCceeeccCC------------cceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccc
Confidence            688889999999999999            779999999999999999998621          0        0112345


Q ss_pred             ccccccccccccccCC---CCCccceEecC
Q psy3254         151 VIGTPFWMAPEVIQEI---GYDCVADMWSL  177 (177)
Q Consensus       151 ~~g~~~y~aPe~~~~~---~~~~~~Diws~  177 (177)
                      .+||.-|+|||++.+.   .|+.|+|+||+
T Consensus       775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSL  804 (1351)
T KOG1035|consen  775 QVGTALYVAPELLSDTSSNKYNSKIDMYSL  804 (1351)
T ss_pred             ccceeeeecHHHhcccccccccchhhhHHH
Confidence            7899999999999764   59999999995

>KOG0596|consensus

Probab=99.36  E-value=2.1e-13  Score=104.51  Aligned_cols=76  Identities=28%  Similarity=0.508  Sum_probs=61.3

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +.+++++|..+++|.|+|+            -|+++- .|.+|+.|||+|..+..+..  .....+||+.||+||.+...
T Consensus       470 L~aV~~IH~~gIVHSDLKP------------ANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~  536 (677)
T KOG0596|consen  470 LLAVKTIHQHGIVHSDLKP------------ANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDM  536 (677)
T ss_pred             HHHHHHHHHhceeecCCCc------------ccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhc
Confidence            6778899999999999994            488774 58999999999998765432  24457899999999998643


Q ss_pred             C-----------CCccceEecC
Q psy3254         167 G-----------YDCVADMWSL  177 (177)
Q Consensus       167 ~-----------~~~~~Diws~  177 (177)
                      .           .+.++||||+
T Consensus       537 ~s~~~~~~~k~Ki~r~SDvWSL  558 (677)
T KOG0596|consen  537 SSSRENGKSKIKISRKSDVWSL  558 (677)
T ss_pred             cccccCCCcceeecCccchhhh
Confidence            2           4578999996

>KOG1095|consensus

Probab=99.36  E-value=1.2e-13  Score=113.48  Aligned_cols=79  Identities=28%  Similarity=0.458  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccc-ccC-CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTD-TMA-KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~-~~~-~~~~~~g~~~y~aPe~~~  164 (177)
                      .+..+++|+....++|||+.            .+|.+++....+|++|||+||.+.. ... ......-...|||||.+.
T Consensus       810 dvA~G~~YLe~~~fvHRDLA------------aRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~  877 (1025)
T KOG1095|consen  810 DVAKGMNYLESKHFVHRDLA------------ARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLK  877 (1025)
T ss_pred             HHhhhhHHHHhCCCcCcchh------------hhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHh
Confidence            44678889999999999998            7799999999999999999995432 211 111123346899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      .+.|+.++|||||
T Consensus       878 d~iFtskSDvWsF  890 (1025)
T KOG1095|consen  878 DGIFTSKSDVWSF  890 (1025)
T ss_pred             hcccccccchhhh
Confidence            9999999999997

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.35  E-value=2.2e-13  Score=103.64  Aligned_cols=79  Identities=30%  Similarity=0.465  Sum_probs=63.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||+++.+.....  ......++..|||||++.
T Consensus       220 qi~~aL~yLH~~giiHrDLk------------p~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  287 (374)
T cd05106         220 QVAQGMDFLASKNCIHRDVA------------ARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF  287 (374)
T ss_pred             HHHHHHHHHHHCCEEeccCc------------hheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhc
Confidence            34688889999999999999            6699999999999999999986543211  122234566899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       288 ~~~~~~~~DvwSl  300 (374)
T cd05106         288 DCVYTVQSDVWSY  300 (374)
T ss_pred             CCCCCccccHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.35  E-value=1.8e-13  Score=113.05  Aligned_cols=80  Identities=11%  Similarity=0.153  Sum_probs=59.1

Q ss_pred             cchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-------------------CCeEEeeeeccccccccc-
Q psy3254          86 FCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-------------------GHAKLADFGVAGQLTDTM-  145 (177)
Q Consensus        86 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-------------------~~~~l~dfg~~~~~~~~~-  145 (177)
                      .+..+++.|+|..+++|+|+|            |+||+++..                   +.++++|||+++...... 
T Consensus        87 ~qi~~al~~lH~~gIvHrDlK------------P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~  154 (793)
T PLN00181         87 RQIVEIVNAAHSQGIVVHNVR------------PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSE  154 (793)
T ss_pred             HHHHHHHHHHHhCCeeeccCC------------chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccc
Confidence            355788999999999999999            679999543                   445666666665321100 


Q ss_pred             ---------------CCCccccccccccccccccCCCCCccceEecC
Q psy3254         146 ---------------AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       146 ---------------~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                     ......+||++|||||++.+..|+.++|||||
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSl  201 (793)
T PLN00181        155 RRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRL  201 (793)
T ss_pred             cchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhH
Confidence                           00112468999999999998899999999996

>KOG0196|consensus

Probab=99.35  E-value=4e-13  Score=106.62  Aligned_cols=77  Identities=34%  Similarity=0.490  Sum_probs=65.0

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccc--cccccccccccC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIG--TPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g--~~~y~aPe~~~~  165 (177)
                      ..+++||+..+.+|||+.            .+|||++.+-.+|++|||++|.+.++.. ..++.-|  ..+|.|||.+..
T Consensus       741 AsGMkYLsdm~YVHRDLA------------ARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~  808 (996)
T KOG0196|consen  741 ASGMKYLSDMNYVHRDLA------------ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY  808 (996)
T ss_pred             HHHhHHHhhcCchhhhhh------------hhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhh
Confidence            567889999999999998            6799999999999999999998865542 2333334  458999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      .+|+.++|||||
T Consensus       809 RKFTsASDVWSy  820 (996)
T KOG0196|consen  809 RKFTSASDVWSY  820 (996)
T ss_pred             cccCchhhcccc
Confidence            999999999996

>KOG0581|consensus

Probab=99.34  E-value=1.6e-12  Score=95.14  Aligned_cols=71  Identities=38%  Similarity=0.721  Sum_probs=62.2

Q ss_pred             CccCCCCCCCC-----CHHHHHhhCcCCCCCCCCCCC-CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCCC
Q psy3254           1 MAEGKPPYGDI-----HPMRAIFMIPTKPPPSFREPD-VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNI   73 (177)
Q Consensus         1 m~~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~-~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~~   73 (177)
                      |++|+.||...     +..+++..|+.+++|.+  |. .+|+++++||.+||.+||.+|++++|+++|||+......+.
T Consensus       270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~l--P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~v  346 (364)
T KOG0581|consen  270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRL--PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNV  346 (364)
T ss_pred             HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCC--CcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccccc
Confidence            47899999874     67899999999999998  54 59999999999999999999999999999999987554443

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=4.5e-13  Score=98.18  Aligned_cols=78  Identities=29%  Similarity=0.411  Sum_probs=65.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++...... .....+|+..|+|||++.+.
T Consensus       110 qi~~~l~~lH~~~ivH~dlk------------p~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  176 (285)
T cd05605         110 EITCGLEDLHRERIVYRDLK------------PENILLDDYGHIRISDLGLAVEIPEGE-TIRGRVGTVGYMAPEVVKNE  176 (285)
T ss_pred             HHHHHHHHHHHCCcEecCCC------------HHHEEECCCCCEEEeeCCCceecCCCC-ccccccCCCCccCcHHhcCC
Confidence            34678889999999999999            669999999999999999997654321 22335789999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       177 ~~~~~~Diws~  187 (285)
T cd05605         177 RYTFSPDWWGL  187 (285)
T ss_pred             CCCccccchhH
Confidence            89999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.34  E-value=2.4e-13  Score=100.75  Aligned_cols=79  Identities=27%  Similarity=0.426  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.............++..|+|||++.+ 
T Consensus       112 qi~~aL~~lH~~~ivH~dlk------------p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (309)
T cd07872         112 QILRGLAYCHRRKVLHRDLK------------PQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS  179 (309)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCC
Confidence            44678889999999999999            66999999999999999999765433233334568899999999875 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       180 ~~~~~~~Diwsl  191 (309)
T cd07872         180 SEYSTQIDMWGV  191 (309)
T ss_pred             CCCCcHHHHHHH
Confidence            468899999985

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.34  E-value=3.2e-13  Score=111.07  Aligned_cols=79  Identities=24%  Similarity=0.322  Sum_probs=64.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc------------------CCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM------------------AKR  148 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~------------------~~~  148 (177)
                      ...+++.++|..+++|+|++            |+||+++.++.++++|||+++......                  ...
T Consensus       121 QIa~AL~yLHs~GIIHRDLK------------PeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~  188 (932)
T PRK13184        121 KICATIEYVHSKGVLHRDLK------------PDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIP  188 (932)
T ss_pred             HHHHHHHHHHHCCccccCCc------------hheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccC
Confidence            34678889999999999999            669999999999999999997652100                  011


Q ss_pred             ccccccccccccccccCCCCCccceEecC
Q psy3254         149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       149 ~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ...+||+.|+|||++.+..++.++|||||
T Consensus       189 g~~vGT~~YmAPE~l~g~~~S~kSDIWSL  217 (932)
T PRK13184        189 GKIVGTPDYMAPERLLGVPASESTDIYAL  217 (932)
T ss_pred             CCCCCCCCCCCHHHhcCCCCCcHhHHHHH
Confidence            23579999999999998899999999995

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.33  E-value=3.5e-13  Score=98.42  Aligned_cols=78  Identities=28%  Similarity=0.388  Sum_probs=65.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||++...... .......|+..|+|||++.+.
T Consensus       103 qi~~al~~lH~~~ivH~dik------------p~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  169 (277)
T cd05607         103 QITCGILHLHSMDIVYRDMK------------PENVLLDDQGNCRLSDLGLAVELKDG-KTITQRAGTNGYMAPEILKEE  169 (277)
T ss_pred             HHHHHHHHHHHCCEEEccCC------------hHhEEEcCCCCEEEeeceeeeecCCC-ceeeccCCCCCccCHHHHccC
Confidence            34677889999999999999            66999999999999999998765432 122335689999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       170 ~~~~~~Dvwsl  180 (277)
T cd05607         170 PYSYPVDWFAM  180 (277)
T ss_pred             CCCCchhHHHH
Confidence            89999999995

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.33  E-value=3.2e-13  Score=98.65  Aligned_cols=79  Identities=24%  Similarity=0.373  Sum_probs=64.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||+++......  .......+++.|+|||.+.
T Consensus       132 ~l~~al~~lH~~~i~H~dlk------------p~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05048         132 QIAAGMEYLSSHHFVHRDLA------------ARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL  199 (283)
T ss_pred             HHHHHHHHHHhCCeeccccc------------cceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhc
Confidence            34678889999999999999            669999999999999999997653221  1223345788899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       200 ~~~~~~~sDv~sl  212 (283)
T cd05048         200 YGKFTTESDIWSF  212 (283)
T ss_pred             cCcCchhhhHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.33  E-value=3.6e-13  Score=101.07  Aligned_cols=79  Identities=30%  Similarity=0.455  Sum_probs=65.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|++++            |+|++++.++.++++|||+++.+.....  ..+...++..|+|||++.
T Consensus       181 qi~~aL~~lH~~~ivHrDik------------p~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  248 (337)
T cd05054         181 QVARGMEFLASRKCIHRDLA------------ARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF  248 (337)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------cceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence            45788889999999999999            6699999999999999999986533211  123345677899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       249 ~~~~~~~~Di~Sl  261 (337)
T cd05054         249 DKVYTTQSDVWSF  261 (337)
T ss_pred             CCCCCccccHHHH
Confidence            9899999999995

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.33  E-value=4.4e-13  Score=99.62  Aligned_cols=79  Identities=30%  Similarity=0.376  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--Ccccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+......  .....++..|+|||.+.
T Consensus       117 qi~~~L~~LH~~~iiH~dlk------------p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~  184 (316)
T cd05108         117 QIAKGMNYLEERRLVHRDLA------------ARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESIL  184 (316)
T ss_pred             HHHHHHHHHHhcCeeccccc------------hhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhc
Confidence            34677889999999999999            66999999999999999999876432211  11223466899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       185 ~~~~~~~~Di~sl  197 (316)
T cd05108         185 HRIYTHQSDVWSY  197 (316)
T ss_pred             cCCCCchhhhHHH
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0578|consensus

Probab=99.32  E-value=1.8e-12  Score=99.44  Aligned_cols=67  Identities=43%  Similarity=0.923  Sum_probs=64.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |+.|.|||...++..+++.|..++.|.++.|..+|++++||+.+||++|+.+|+++.++|+|||+..
T Consensus       462 MveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  462 MVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             HhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhh
Confidence            6889999999999999999999999999999999999999999999999999999999999999953

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.32  E-value=3.5e-13  Score=102.37  Aligned_cols=79  Identities=27%  Similarity=0.427  Sum_probs=64.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++...... .......++..|+|||++.+
T Consensus       111 qi~~aL~~LH~~~ivH~dlk------------p~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~  178 (372)
T cd07853         111 QILRGLKYLHSAGILHRDIK------------PGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG  178 (372)
T ss_pred             HHHHHHHHHHhCCeeCCCCC------------hHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcC
Confidence            44688899999999999999            669999999999999999997653321 12233568899999999987


Q ss_pred             C-CCCccceEecC
Q psy3254         166 I-GYDCVADMWSL  177 (177)
Q Consensus       166 ~-~~~~~~Diws~  177 (177)
                      . .++.++||||+
T Consensus       179 ~~~~~~~~Diwsl  191 (372)
T cd07853         179 SRHYTSAVDIWSV  191 (372)
T ss_pred             CCCCCcHHHHHhH
Confidence            4 58899999995

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.32  E-value=5.7e-13  Score=97.67  Aligned_cols=77  Identities=30%  Similarity=0.452  Sum_probs=64.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++....... ......|+..|+|||++.+..
T Consensus       111 i~~~l~~lH~~~iiH~dik------------p~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~  177 (285)
T cd05630         111 ICCGLEDLHQERIVYRDLK------------PENILLDDHGHIRISDLGLAVHVPEGQ-TIKGRVGTVGYMAPEVVKNER  177 (285)
T ss_pred             HHHHHHHHHhCCEEeCCCC------------HHHEEECCCCCEEEeeccceeecCCCc-cccCCCCCccccChHHHcCCC
Confidence            4677889999999999999            669999999999999999987544321 223357899999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++||||+
T Consensus       178 ~~~~~Diwsl  187 (285)
T cd05630         178 YTFSPDWWAL  187 (285)
T ss_pred             CCCccccHHH
Confidence            9999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0584|consensus

Probab=99.32  E-value=3.1e-13  Score=104.63  Aligned_cols=74  Identities=35%  Similarity=0.608  Sum_probs=62.5

Q ss_pred             HHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          89 FEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      +++++|+|.+.  ++|||+|.+            ||+++. .|.+||+|+|||..+....  ....+|||-+||||... 
T Consensus       153 LkGL~yLHs~~PPIIHRDLKCD------------NIFinG~~G~VKIGDLGLAtl~r~s~--aksvIGTPEFMAPEmYE-  217 (632)
T KOG0584|consen  153 LKGLVYLHSQDPPIIHRDLKCD------------NIFVNGNLGEVKIGDLGLATLLRKSH--AKSVIGTPEFMAPEMYE-  217 (632)
T ss_pred             HHHhhhhhcCCCCccccccccc------------eEEEcCCcCceeecchhHHHHhhccc--cceeccCccccChHHHh-
Confidence            67788999886  899999966            999964 6789999999998776543  33478999999999987 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+..+|||||
T Consensus       218 E~YnE~VDVYaF  229 (632)
T KOG0584|consen  218 ENYNELVDVYAF  229 (632)
T ss_pred             hhcchhhhhhhh
Confidence            589999999997

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.31  E-value=7.6e-13  Score=97.01  Aligned_cols=78  Identities=29%  Similarity=0.428  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||++...... .......|+..|+|||++.+.
T Consensus       110 ql~~~l~~lH~~~iiH~dik------------p~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~g~~~~~aPE~~~~~  176 (285)
T cd05632         110 EILCGLEDLHRENTVYRDLK------------PENILLDDYGHIRISDLGLAVKIPEG-ESIRGRVGTVGYMAPEVLNNQ  176 (285)
T ss_pred             HHHHHHHHHHhCCeeecCCC------------HHHEEECCCCCEEEecCCcceecCCC-CcccCCCCCcCccChHHhcCC
Confidence            34678889999999999999            66999999999999999998765332 122345789999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+||+
T Consensus       177 ~~~~~~Di~sl  187 (285)
T cd05632         177 RYTLSPDYWGL  187 (285)
T ss_pred             CCCcccchHHH
Confidence            89999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.31  E-value=7e-13  Score=95.43  Aligned_cols=78  Identities=29%  Similarity=0.572  Sum_probs=65.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++..+...........|++.|+|||++.+..
T Consensus       111 l~~~l~~lH~~~i~H~di~------------p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  178 (257)
T cd08223         111 IAMALQYLHEKHILHRDLK------------TQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKP  178 (257)
T ss_pred             HHHHHHHHHhCCeeccCCC------------chhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCC
Confidence            3567789999999999999            6699999999999999999986644333334567889999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       179 ~~~~~Dv~sl  188 (257)
T cd08223         179 YNYKSDVWAL  188 (257)
T ss_pred             CCchhhhHHH
Confidence            9999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.31  E-value=5.9e-13  Score=96.63  Aligned_cols=79  Identities=46%  Similarity=0.772  Sum_probs=64.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.............|+..|+|||++.  
T Consensus       119 qi~~~l~~LH~~~ivh~dl~------------~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  186 (272)
T cd06637         119 EILRGLSHLHQHKVIHRDIK------------GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD  186 (272)
T ss_pred             HHHHHHHHHHHCCCccCCCC------------HHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhccc
Confidence            44677889999999999999            6699999999999999999986544333344567899999999986  


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         ...|+.++|+|||
T Consensus       187 ~~~~~~~~~~~Dv~sl  202 (272)
T cd06637         187 ENPDATYDFKSDLWSL  202 (272)
T ss_pred             cCcCCCCCchhhHHHH
Confidence               3358889999985

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.31  E-value=4.9e-13  Score=97.70  Aligned_cols=79  Identities=23%  Similarity=0.320  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |.|+++..++.++++|||+++.+.....  ......+++.|+|||++.
T Consensus       132 ql~~aL~~lH~~gi~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05091         132 QIAAGMEFLSSHHVVHKDLA------------TRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM  199 (283)
T ss_pred             HHHHHHHHHHHcCccccccc------------hhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHh
Confidence            44678889999999999999            6699999999999999999886533211  123345677899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      .+.++.++|||||
T Consensus       200 ~~~~~~~~Dv~sl  212 (283)
T cd05091         200 YGKFSIDSDIWSY  212 (283)
T ss_pred             cCCCCcchhHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG4717|consensus

Probab=99.31  E-value=8e-13  Score=101.07  Aligned_cols=76  Identities=28%  Similarity=0.480  Sum_probs=64.7

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe-CCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL-NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~-~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..++.|+|...++|++++            |+|+.+ .+-|.+|+.|||++..+.+ ++...+.||++.|-|||++.+..
T Consensus       128 ~~AI~YCHqLHVVHRDLK------------PENVVFFEKlGlVKLTDFGFSNkf~P-G~kL~TsCGSLAYSAPEILLGDs  194 (864)
T KOG4717|consen  128 VHAISYCHQLHVVHRDLK------------PENVVFFEKLGLVKLTDFGFSNKFQP-GKKLTTSCGSLAYSAPEILLGDS  194 (864)
T ss_pred             HHHHHHHhhhhhhcccCC------------cceeEEeeecCceEeeeccccccCCC-cchhhcccchhhccCchhhhcCc
Confidence            566779999999999999            678765 6788999999999976654 45667889999999999999999


Q ss_pred             CCc-cceEecC
Q psy3254         168 YDC-VADMWSL  177 (177)
Q Consensus       168 ~~~-~~Diws~  177 (177)
                      |+. ++||||+
T Consensus       195 YDAPAVDiWSL  205 (864)
T KOG4717|consen  195 YDAPAVDIWSL  205 (864)
T ss_pred             cCCcchhhhHH
Confidence            885 6899996

>KOG0033|consensus

Probab=99.31  E-value=2.8e-12  Score=89.83  Aligned_cols=67  Identities=33%  Similarity=0.368  Sum_probs=57.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |+.|.+||.+.+...++..|+++.+ ...+.++.+|+++++||++||..||.+|.|+.|.|+|||+..
T Consensus       205 LL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  205 LLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence            4689999999988899989987753 222235788999999999999999999999999999999975

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.30  E-value=5.7e-13  Score=99.71  Aligned_cols=76  Identities=39%  Similarity=0.690  Sum_probs=63.5

Q ss_pred             hHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|.. +++|++++            +.||+++.++.++++|||+++.....  ......||..|+|||++.+.
T Consensus       112 i~~~l~~lH~~~~ivH~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~g~~~y~aPE~~~~~  177 (331)
T cd06649         112 VLRGLAYLREKHQIMHRDVK------------PSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGT  177 (331)
T ss_pred             HHHHHHHHhhcCCEEcCCCC------------hhhEEEcCCCcEEEccCccccccccc--ccccCCCCcCcCCHhHhcCC
Confidence            46778899875 59999999            66999999999999999999765432  22345799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       178 ~~~~~~Diwsl  188 (331)
T cd06649         178 HYSVQSDIWSM  188 (331)
T ss_pred             CCCchHhHHHH
Confidence            89999999985

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.30  E-value=9.6e-13  Score=95.35  Aligned_cols=78  Identities=47%  Similarity=0.842  Sum_probs=63.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||++.   
T Consensus       115 i~~~l~~lH~~~i~H~dlk------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  182 (267)
T cd06645         115 TLQGLYYLHSKGKMHRDIK------------GANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVER  182 (267)
T ss_pred             HHHHHHHHHHCCeecCCCC------------HHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhcccc
Confidence            3677889999999999999            6699999999999999999876543322334457899999999974   


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|+||+
T Consensus       183 ~~~~~~~~DvwSl  195 (267)
T cd06645         183 KGGYNQLCDIWAV  195 (267)
T ss_pred             CCCCCchhhhHHH
Confidence            4568889999995

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.30  E-value=6.9e-13  Score=96.89  Aligned_cols=78  Identities=31%  Similarity=0.359  Sum_probs=63.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.......  ......++..|+|||++.+
T Consensus       118 i~~~l~~lH~~~iiH~dlk------------p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  185 (279)
T cd05111         118 IAKGMYYLEEHRMVHRNLA------------ARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF  185 (279)
T ss_pred             HHHHHHHHHHCCEeccccC------------cceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhcc
Confidence            3577889999999999999            6699999999999999999986533211  1223456778999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      +.++.++|||||
T Consensus       186 ~~~~~~~Dv~sl  197 (279)
T cd05111         186 GRYTHQSDVWSY  197 (279)
T ss_pred             CCcCchhhHHHH
Confidence            889999999995

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0586|consensus

Probab=99.29  E-value=8.6e-13  Score=101.97  Aligned_cols=77  Identities=30%  Similarity=0.462  Sum_probs=67.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...+++|+|.+.++|++++            .+|++++.+.+++|+|||++..+.. .....+.||++.|.|||++.+..
T Consensus       164 ~vsaveYcH~k~ivHrdLk------------~eNilL~~~mnikIaDfgfS~~~~~-~~~lqt~cgsppyAaPEl~~g~~  230 (596)
T KOG0586|consen  164 IVSAVEYCHSKNIVHRDLK------------AENILLDENMNIKIADFGFSTFFDY-GLMLQTFCGSPPYAAPELFNGKK  230 (596)
T ss_pred             HHHHHHHHhhcceeccccc------------hhhcccccccceeeeccccceeecc-cccccccCCCCCccChHhhcCcc
Confidence            3678889999999999999            6699999999999999999987663 35567789999999999999877


Q ss_pred             CC-ccceEecC
Q psy3254         168 YD-CVADMWSL  177 (177)
Q Consensus       168 ~~-~~~Diws~  177 (177)
                      |. +.+|+||+
T Consensus       231 y~gpe~D~Wsl  241 (596)
T KOG0586|consen  231 YDGPEVDIWSL  241 (596)
T ss_pred             cCCcceehhhh
Confidence            65 68999985

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.29  E-value=1.1e-12  Score=94.44  Aligned_cols=78  Identities=33%  Similarity=0.574  Sum_probs=66.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.............|+..|+|||++.+..
T Consensus       109 i~~al~~lH~~~i~H~dl~------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  176 (255)
T cd08219         109 MCLGVQHIHEKRVLHRDIK------------SKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMP  176 (255)
T ss_pred             HHHHHHHHhhCCcccCCCC------------cceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCC
Confidence            4677889999999999999            6699999999999999999987654433334567889999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       177 ~~~~~Dv~sl  186 (255)
T cd08219         177 YNNKSDIWSL  186 (255)
T ss_pred             cCchhhhhhh
Confidence            9999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.29  E-value=6.1e-13  Score=97.88  Aligned_cols=78  Identities=40%  Similarity=0.804  Sum_probs=65.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++..............|+..|+|||.+.+..
T Consensus       127 i~~~l~~LH~~~ivH~dlk------------p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  194 (292)
T cd06658         127 VLRALSYLHNQGVIHRDIK------------SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLP  194 (292)
T ss_pred             HHHHHHHHHHCCEeecCCC------------HHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCC
Confidence            3578889999999999999            6699999999999999999876543333334467899999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       195 ~~~~~Dv~sl  204 (292)
T cd06658         195 YGTEVDIWSL  204 (292)
T ss_pred             CCchhhHHHH
Confidence            9999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.29  E-value=6.2e-13  Score=97.18  Aligned_cols=79  Identities=29%  Similarity=0.431  Sum_probs=64.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +..+++.++|..+++|++++            ++|++++.++.++++|||+++.............++..|+|||++.+.
T Consensus       107 qi~~al~~LH~~~i~H~dl~------------~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  174 (284)
T cd07839         107 QLLKGLAFCHSHNVLHRDLK------------PQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA  174 (284)
T ss_pred             HHHHHHHHHHHCCEecCCCC------------HHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCC
Confidence            45788889999999999999            669999999999999999998654332233345678899999998764


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++|||||
T Consensus       175 ~~~~~~~Diwsl  186 (284)
T cd07839         175 KLYSTSIDMWSA  186 (284)
T ss_pred             cccCcHHHHHHH
Confidence             47899999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0200|consensus

Probab=99.29  E-value=7.1e-13  Score=106.37  Aligned_cols=83  Identities=27%  Similarity=0.410  Sum_probs=66.0

Q ss_pred             CCCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC-ccccc--cccccc
Q psy3254          83 GGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR-NTVIG--TPFWMA  159 (177)
Q Consensus        83 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~g--~~~y~a  159 (177)
                      ..++++..+++|+....++|||+.            .+||++..+..+|++|||++|...+..... ....|  ...|||
T Consensus       422 sfa~QIa~GMe~L~~~~~vHRDLA------------aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmA  489 (609)
T KOG0200|consen  422 SFAYQIANGMEYLASVPCVHRDLA------------ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMA  489 (609)
T ss_pred             HHHHHHHHHHHHHhhCCccchhhh------------hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecC
Confidence            445677889999999999999998            779999999999999999998643321111 11122  446999


Q ss_pred             cccccCCCCCccceEecC
Q psy3254         160 PEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~~~~~~~~Diws~  177 (177)
                      ||.+....|+.++|||||
T Consensus       490 pEsl~~~~ft~kSDVWSf  507 (609)
T KOG0200|consen  490 PESLFDRVFTSKSDVWSF  507 (609)
T ss_pred             HHHhccCcccccchhhHH
Confidence            999999999999999996

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.29  E-value=8.4e-13  Score=100.48  Aligned_cols=79  Identities=30%  Similarity=0.439  Sum_probs=63.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |.|++++.++.++++|||+++.......  ..+...++..|+|||++.
T Consensus       222 qi~~~l~~lH~~~ivH~Dlk------------p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  289 (375)
T cd05104         222 QVAKGMSFLASKNCIHRDLA------------ARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIF  289 (375)
T ss_pred             HHHHHHHHHHHCCeeccCCc------------hhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhc
Confidence            44678889999999999999            6699999999999999999986543211  122234566799999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       290 ~~~~~~~sDi~sl  302 (375)
T cd05104         290 NCVYTFESDVWSY  302 (375)
T ss_pred             CCCCCCCCCHHHH
Confidence            8899999999995

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.29  E-value=6.1e-13  Score=98.13  Aligned_cols=78  Identities=40%  Similarity=0.778  Sum_probs=65.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..+...........|+..|+|||++.+..
T Consensus       126 i~~~L~~LH~~~ivH~dl~------------p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  193 (297)
T cd06659         126 VLQALCYLHSQGVIHRDIK------------SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTP  193 (297)
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCC
Confidence            4677889999999999999            6699999999999999999876544333334467899999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       194 ~~~~~Dv~sl  203 (297)
T cd06659         194 YGTEVDIWSL  203 (297)
T ss_pred             CCchhhHHHH
Confidence            9999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.29  E-value=1e-12  Score=94.46  Aligned_cols=79  Identities=30%  Similarity=0.551  Sum_probs=66.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.+...........|+..|+|||++.+.
T Consensus       109 ~l~~al~~lH~~~i~h~dl~------------~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (256)
T cd08529         109 QILLGLAHLHSKKILHRDIK------------SLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK  176 (256)
T ss_pred             HHHHHHHHHHHCCcccCCCC------------cceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCC
Confidence            34677889999999999999            669999999999999999998765443333445788999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       177 ~~~~~~Di~sl  187 (256)
T cd08529         177 PYNEKSDVWAL  187 (256)
T ss_pred             CCCCccchHHH
Confidence            89999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.29  E-value=9.6e-13  Score=96.12  Aligned_cols=77  Identities=39%  Similarity=0.581  Sum_probs=65.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||++..+...  .....+|+..|+|||++.+.
T Consensus       103 qi~~~l~~lH~~~i~H~dlk------------p~Nill~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  168 (279)
T cd06619         103 AVVKGLTYLWSLKILHRDVK------------PSNMLVNTRGQVKLCDFGVSTQLVNS--IAKTYVGTNAYMAPERISGE  168 (279)
T ss_pred             HHHHHHHHHHHCCEeeCCCC------------HHHEEECCCCCEEEeeCCcceecccc--cccCCCCChhhcCceeecCC
Confidence            34677889999999999999            66999999999999999999765432  22345789999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       169 ~~~~~~Dvwsl  179 (279)
T cd06619         169 QYGIHSDVWSL  179 (279)
T ss_pred             CCCCcchHHHH
Confidence            89999999985

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0574|consensus

Probab=99.29  E-value=9.2e-13  Score=94.77  Aligned_cols=69  Identities=64%  Similarity=1.270  Sum_probs=65.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |+.|+|||.+-.+...++.|..+++|.|..|..||.++-|||++||++.|.+|.++.++++|+|+....
T Consensus       222 MAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~  290 (502)
T KOG0574|consen  222 MAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP  290 (502)
T ss_pred             hhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence            789999999999999999999999999999999999999999999999999999999999999997654

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.28  E-value=1.6e-12  Score=95.05  Aligned_cols=79  Identities=46%  Similarity=0.819  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||++.  
T Consensus       111 qi~~~L~~LH~~~i~H~dlk------------p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (282)
T cd06643         111 QTLEALNYLHENKIIHRDLK------------AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE  178 (282)
T ss_pred             HHHHHHHHHHHCCeeecCCC------------cccEEEccCCCEEEccccccccccccccccccccccccccCHhhcccc
Confidence            34677889999999999999            6699999999999999999876543322333456899999999984  


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         ...++.++|+|||
T Consensus       179 ~~~~~~~~~~~Dv~sl  194 (282)
T cd06643         179 TSKDRPYDYKADVWSL  194 (282)
T ss_pred             CCCCCCCCccchhhhH
Confidence               3457789999985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.28  E-value=7.1e-13  Score=96.48  Aligned_cols=79  Identities=24%  Similarity=0.410  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+....  .......++..|+|||.+.
T Consensus       127 ~i~~~l~~lH~~~i~H~di~------------p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05032         127 EIADGMAYLAAKKFVHRDLA------------ARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK  194 (277)
T ss_pred             HHHHHHHHHHhCCccccccC------------hheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHh
Confidence            34677889999999999999            669999999999999999997654321  1223445778899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       195 ~~~~~~~~Di~sl  207 (277)
T cd05032         195 DGVFTTKSDVWSF  207 (277)
T ss_pred             cCCCCcccchHHH
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.28  E-value=9e-13  Score=96.19  Aligned_cols=79  Identities=28%  Similarity=0.368  Sum_probs=63.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--Ccccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+......  .....++..|+|||.+.
T Consensus       117 qi~~~L~~lH~~~iiH~dlk------------p~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05109         117 QIAKGMSYLEEVRLVHRDLA------------ARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL  184 (279)
T ss_pred             HHHHHHHHHHHCCeeccccc------------cceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhc
Confidence            44778889999999999999            66999999999999999999866432111  11123466899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       185 ~~~~~~~~Di~sl  197 (279)
T cd05109         185 HRRFTHQSDVWSY  197 (279)
T ss_pred             cCCCCchhHHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.28  E-value=2.2e-12  Score=94.67  Aligned_cols=79  Identities=29%  Similarity=0.416  Sum_probs=63.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      +...++.++|..+++|++++            +.|++++.++.++++|||+++.+.....  ......++..|+|||++.
T Consensus       140 qi~~al~~LH~~~ivH~dlk------------p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  207 (293)
T cd05053         140 QVARGMEFLASKKCIHRDLA------------ARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALF  207 (293)
T ss_pred             HHHHHHHHHHHCCccccccc------------eeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhc
Confidence            34678889999999999999            6699999999999999999986543211  112233567899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       208 ~~~~~~~~Di~sl  220 (293)
T cd05053         208 DRVYTHQSDVWSF  220 (293)
T ss_pred             cCCcCcccceeeh
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.27  E-value=1.2e-12  Score=98.76  Aligned_cols=78  Identities=28%  Similarity=0.432  Sum_probs=65.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++..... .......|+..|+|||.+.+.
T Consensus       126 ql~~aL~~LH~~gi~H~dlk------------p~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  192 (353)
T cd07850         126 QMLCGIKHLHSAGIIHRDLK------------PSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  192 (353)
T ss_pred             HHHHHHHHHHhCCeeeCCCC------------HHHEEECCCCCEEEccCccceeCCCC-CCCCCCcccccccCHHHHhCC
Confidence            34678889999999999999            66999999999999999999865432 122345688899999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       193 ~~~~~~Dvwsl  203 (353)
T cd07850         193 GYKENVDIWSV  203 (353)
T ss_pred             CCCCchhhHhH
Confidence            99999999995

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG1094|consensus

Probab=99.27  E-value=1.2e-12  Score=101.20  Aligned_cols=82  Identities=24%  Similarity=0.278  Sum_probs=68.6

Q ss_pred             CCcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccc--ccCCCccccccccccccc
Q psy3254          84 GGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPE  161 (177)
Q Consensus        84 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~~g~~~y~aPe  161 (177)
                      ...+...+++|+....++|+++.            ++|+|++.++++|++|||++|.+-.  .....+..+-...|||+|
T Consensus       642 i~tqiasgmaYLes~nfVHrd~a------------~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawE  709 (807)
T KOG1094|consen  642 ICTQIASGMAYLESLNFVHRDLA------------TRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWE  709 (807)
T ss_pred             HHHHHHHHHHHHHhhchhhcccc------------ccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHH
Confidence            34456788999999999999998            7799999999999999999996532  222334456678999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      .+..+.|++++|+|+|
T Consensus       710 sillgkFttaSDvWaf  725 (807)
T KOG1094|consen  710 SILLGKFTTASDVWAF  725 (807)
T ss_pred             HHHhccccchhhhhhh
Confidence            9999999999999986

>KOG0608|consensus

Probab=99.27  E-value=1.6e-12  Score=101.53  Aligned_cols=76  Identities=33%  Similarity=0.629  Sum_probs=60.4

Q ss_pred             HHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccc---------ccccCC-------------
Q psy3254          90 EFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQL---------TDTMAK-------------  147 (177)
Q Consensus        90 ~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~---------~~~~~~-------------  147 (177)
                      .+++..|..+++|||+|.+            |||++.+|++||+|||||.-+         ......             
T Consensus       740 cAiesVHkmGFIHRDiKPD------------NILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d  807 (1034)
T KOG0608|consen  740 CAIESVHKMGFIHRDIKPD------------NILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWAD  807 (1034)
T ss_pred             HHHHHHHhccceecccCcc------------ceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhcc
Confidence            4566889999999999955            999999999999999998532         100000             


Q ss_pred             --------------------CccccccccccccccccCCCCCccceEecC
Q psy3254         148 --------------------RNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       148 --------------------~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                          ...++||+.|+|||++...+|+..+|+||.
T Consensus       808 ~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~  857 (1034)
T KOG0608|consen  808 ISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV  857 (1034)
T ss_pred             ccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh
Confidence                                012579999999999999999999999983

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.27  E-value=1.8e-12  Score=95.27  Aligned_cols=78  Identities=23%  Similarity=0.310  Sum_probs=63.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ..+++.++|..+++|++++            |+|++++.++.++++|||+++......  .......++..|+|||++..
T Consensus       139 i~~al~~LH~~~i~H~dlk------------p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (296)
T cd05051         139 IASGMRYLESLNFVHRDLA------------TRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL  206 (296)
T ss_pred             HHHHHHHHHHcCccccccc------------hhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc
Confidence            4677889999999999999            669999999999999999987653221  12234456788999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       207 ~~~~~~~Dv~sl  218 (296)
T cd05051         207 GKFTTKSDVWAF  218 (296)
T ss_pred             CCCCccchhhhh
Confidence            889999999996

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.27  E-value=2.5e-12  Score=94.14  Aligned_cols=79  Identities=24%  Similarity=0.492  Sum_probs=64.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||+++.+.....   ......|+..|+|||++
T Consensus       117 ~i~~aL~~lH~~gi~H~dlk------------p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~  184 (284)
T cd05079         117 QICKGMDYLGSRQYVHRDLA------------ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECL  184 (284)
T ss_pred             HHHHHHHHHHHCCeeecccc------------hheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHh
Confidence            33677889999999999999            6699999999999999999986543221   12234567789999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       185 ~~~~~~~~~Di~sl  198 (284)
T cd05079         185 IQSKFYIASDVWSF  198 (284)
T ss_pred             ccCCCCccccchhh
Confidence            88889999999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG1989|consensus

Probab=99.27  E-value=1.2e-12  Score=104.62  Aligned_cols=79  Identities=28%  Similarity=0.399  Sum_probs=61.6

Q ss_pred             chHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC---------ccccccc
Q psy3254          87 CDFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR---------NTVIGTP  155 (177)
Q Consensus        87 ~~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~g~~  155 (177)
                      ...+++..+|...  ++|||+|            .+|+|+..++..||||||.+..........         -....|+
T Consensus       152 dv~~AVa~mH~~~pPiIHRDLK------------iENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp  219 (738)
T KOG1989|consen  152 DVCEAVAAMHYLKPPIIHRDLK------------IENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTP  219 (738)
T ss_pred             HHHHHHHHHhcCCCccchhhhh------------hhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCc
Confidence            3467888999988  9999999            569999999999999999886432221110         1134788


Q ss_pred             cccccccc---cCCCCCccceEecC
Q psy3254         156 FWMAPEVI---QEIGYDCVADMWSL  177 (177)
Q Consensus       156 ~y~aPe~~---~~~~~~~~~Diws~  177 (177)
                      .|.|||.+   .+.+.+.|+|||||
T Consensus       220 ~YRsPEMIDlysg~pI~eKsDIWAL  244 (738)
T KOG1989|consen  220 QYRSPEMIDLYSGLPIGEKSDIWAL  244 (738)
T ss_pred             cccChHHHhhhcCCCCcchhHHHHH
Confidence            99999988   46789999999985

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.26  E-value=1.1e-12  Score=95.63  Aligned_cols=78  Identities=23%  Similarity=0.421  Sum_probs=63.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ..+++.++|..+++|++++            |+|++++.++.++++|||+++.......  ......++..|+|||++.+
T Consensus       128 l~~~l~~lH~~~~vH~dlk------------p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05062         128 IADGMAYLNANKFVHRDLA------------ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  195 (277)
T ss_pred             HHHHHHHHHHCCcccCCcc------------hheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc
Confidence            4677889999999999999            6699999999999999999875432211  1122345778999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       196 ~~~~~~~Di~sl  207 (277)
T cd05062         196 GVFTTYSDVWSF  207 (277)
T ss_pred             CCcCchhHHHHH
Confidence            889999999995

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.26  E-value=1.4e-12  Score=96.39  Aligned_cols=79  Identities=28%  Similarity=0.417  Sum_probs=64.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||+++.+.....  ......++..|+|||++.
T Consensus       145 qi~~al~~LH~~givH~dlk------------p~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  212 (304)
T cd05101         145 QVARGMEYLASQKCIHRDLA------------ARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALF  212 (304)
T ss_pred             HHHHHHHHHHHCCeeecccc------------cceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhc
Confidence            45788899999999999999            6699999999999999999986543211  122234567899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       213 ~~~~~~~~Di~sl  225 (304)
T cd05101         213 DRVYTHQSDVWSF  225 (304)
T ss_pred             cCCCCchhhHHHH
Confidence            8889999999985

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.26  E-value=1.9e-12  Score=95.43  Aligned_cols=77  Identities=43%  Similarity=0.821  Sum_probs=64.3

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||.+.+..+
T Consensus       125 ~~al~~LH~~~i~H~dL~------------p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (296)
T cd06655         125 LQALEFLHANQVIHRDIK------------SDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY  192 (296)
T ss_pred             HHHHHHHHHCCcccCCCC------------HHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCC
Confidence            577889999999999999            66999999999999999998765433222334568889999999988889


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.++|+|||
T Consensus       193 ~~~~Dv~sl  201 (296)
T cd06655         193 GPKVDIWSL  201 (296)
T ss_pred             CchhhHHHH
Confidence            999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.26  E-value=1e-12  Score=98.51  Aligned_cols=77  Identities=39%  Similarity=0.683  Sum_probs=63.3

Q ss_pred             chHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|.. +++|++++            ++|++++.++.++++|||++..+...  ......|+..|+|||++.+
T Consensus       111 ~l~~~l~~lH~~~~ivH~dlk------------p~Nili~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~  176 (333)
T cd06650         111 AVIKGLTYLREKHKIMHRDVK------------PSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQG  176 (333)
T ss_pred             HHHHHHHHHHhcCCEEecCCC------------hhhEEEcCCCCEEEeeCCcchhhhhh--ccccCCCCccccCHHHhcC
Confidence            346778899874 69999999            66999999999999999998765332  2234578999999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       177 ~~~~~~~Dvwsl  188 (333)
T cd06650         177 THYSVQSDIWSM  188 (333)
T ss_pred             CCCCcHHHHHHH
Confidence            889999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.26  E-value=2.3e-12  Score=94.11  Aligned_cols=78  Identities=46%  Similarity=0.789  Sum_probs=63.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      ..+++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||.+.   
T Consensus       130 i~~al~~LH~~~ivH~dl~------------~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~  197 (282)
T cd06636         130 ILRGLAHLHAHKVIHRDIK------------GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  197 (282)
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCccc
Confidence            4678889999999999999            6699999999999999999876543322334467899999999986   


Q ss_pred             --CCCCCccceEecC
Q psy3254         165 --EIGYDCVADMWSL  177 (177)
Q Consensus       165 --~~~~~~~~Diws~  177 (177)
                        ...++.++|+|||
T Consensus       198 ~~~~~~~~~~Dvwsl  212 (282)
T cd06636         198 NPDATYDYRSDIWSL  212 (282)
T ss_pred             CcCcCCCcccchhHH
Confidence              3458889999995

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.26  E-value=1.7e-12  Score=95.64  Aligned_cols=78  Identities=44%  Similarity=0.802  Sum_probs=64.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||.+.+..
T Consensus       125 l~~aL~~LH~~gi~H~dLk------------p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  192 (296)
T cd06654         125 CLQALEFLHSNQVIHRDIK------------SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  192 (296)
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCC
Confidence            3677889999999999999            6699999999999999999876543322233457889999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       193 ~~~~~Dv~s~  202 (296)
T cd06654         193 YGPKVDIWSL  202 (296)
T ss_pred             CCccchHHHH
Confidence            8999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.25  E-value=2.3e-12  Score=94.59  Aligned_cols=79  Identities=24%  Similarity=0.404  Sum_probs=64.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.............++..|+|||++.+ 
T Consensus       111 qi~~~L~~lH~~~i~H~dlk------------p~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (291)
T cd07870         111 QLLRGLAYIHGQHILHRDLK------------PQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGA  178 (291)
T ss_pred             HHHHHHHHHHhCCcccCCCC------------hHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecC
Confidence            44678889999999999999            66999999999999999999765433233334567889999999875 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       179 ~~~~~~~Dv~sl  190 (291)
T cd07870         179 TDYSSALDIWGA  190 (291)
T ss_pred             CCCCcHHHHHHH
Confidence            457889999985

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.25  E-value=1.3e-12  Score=95.42  Aligned_cols=79  Identities=28%  Similarity=0.428  Sum_probs=63.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...+++.++|..+++|++++            ++||+++.++.++++|||++..............++..|+|||++.+ 
T Consensus       109 qi~~~L~~lH~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (285)
T cd07861         109 QILQGILFCHSRRVLHRDLK------------PQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGS  176 (285)
T ss_pred             HHHHHHHHHHhCCeeecCCC------------HHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCC
Confidence            44778889999999999999            66999999999999999999765433222333467889999999875 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       177 ~~~~~~~Dv~sl  188 (285)
T cd07861         177 PRYSTPVDIWSI  188 (285)
T ss_pred             CCcCcHHHHHHH
Confidence            457889999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.25  E-value=2.6e-12  Score=93.95  Aligned_cols=79  Identities=24%  Similarity=0.381  Sum_probs=63.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |.|++++.++.++++|||+++......  .......++..|+|||++.
T Consensus       132 ~i~~al~~lH~~~i~H~dlk------------p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05090         132 QIAAGMEYLSSHFFVHKDLA------------ARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM  199 (283)
T ss_pred             HHHHHHHHHHhcCeehhccc------------cceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhc
Confidence            34678889999999999999            669999999999999999998653321  1123344677899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|+|||
T Consensus       200 ~~~~~~~~Dv~sl  212 (283)
T cd05090         200 YGKFSSDSDIWSF  212 (283)
T ss_pred             cCCCCchhhhHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.25  E-value=1.4e-12  Score=94.43  Aligned_cols=78  Identities=28%  Similarity=0.600  Sum_probs=64.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||.+.+..
T Consensus       115 i~~~l~~LH~~~i~H~dl~------------~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  182 (267)
T cd08228         115 LCSAVEHMHSRRVMHRDIK------------PANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  182 (267)
T ss_pred             HHHHHHHHhhCCeeCCCCC------------HHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCC
Confidence            4677889999999999999            6699999999999999999876544322233456888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       183 ~~~~~Di~sl  192 (267)
T cd08228         183 YNFKSDIWSL  192 (267)
T ss_pred             CCchhhHHHH
Confidence            8999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.25  E-value=3.1e-12  Score=93.56  Aligned_cols=79  Identities=27%  Similarity=0.450  Sum_probs=65.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||++........ ......++..|+|||++.+
T Consensus       108 ~i~~~l~~LH~~~i~H~dl~------------~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~  175 (288)
T cd07833         108 QLLQAIAYCHSHNIIHRDIK------------PENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVG  175 (288)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcC
Confidence            34678889999999999999            6699999999999999999986654322 3334678889999999988


Q ss_pred             C-CCCccceEecC
Q psy3254         166 I-GYDCVADMWSL  177 (177)
Q Consensus       166 ~-~~~~~~Diws~  177 (177)
                      . .++.++|+|||
T Consensus       176 ~~~~~~~~Dv~sl  188 (288)
T cd07833         176 DTNYGKPVDVWAI  188 (288)
T ss_pred             CCCcCchhhHHHH
Confidence            7 78899999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.25  E-value=1.8e-12  Score=93.86  Aligned_cols=78  Identities=29%  Similarity=0.609  Sum_probs=65.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++..............|+..|+|||++.+..
T Consensus       115 i~~~l~~LH~~~i~H~dl~------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~  182 (267)
T cd08229         115 LCSALEHMHSRRVMHRDIK------------PANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  182 (267)
T ss_pred             HHHHHHHHHHCCeecCCCC------------HHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCC
Confidence            4677889999999999999            6699999999999999999876543322233456889999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       183 ~~~~~Dv~sl  192 (267)
T cd08229         183 YNFKSDIWSL  192 (267)
T ss_pred             ccchhhHHHH
Confidence            9999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.24  E-value=2e-12  Score=94.96  Aligned_cols=78  Identities=24%  Similarity=0.368  Sum_probs=63.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++......  .......|+..|+|||++.+
T Consensus       132 i~~al~~lH~~~i~H~dlk------------p~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  199 (291)
T cd05094         132 IASGMVYLASQHFVHRDLA------------TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  199 (291)
T ss_pred             HHHHHHHHHhCCeeecccC------------cceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc
Confidence            4677889999999999999            669999999999999999997543321  12233456788999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       200 ~~~~~~~Di~sl  211 (291)
T cd05094         200 RKFTTESDVWSF  211 (291)
T ss_pred             CCCCchhhHHHH
Confidence            889999999996

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.24  E-value=1.7e-12  Score=95.16  Aligned_cols=78  Identities=26%  Similarity=0.373  Sum_probs=63.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            |.|++++.++.++++|||+++......  .......++..|+|||++.+
T Consensus       129 l~~aL~~lH~~~i~H~dlk------------p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  196 (288)
T cd05093         129 IAAGMVYLASQHFVHRDLA------------TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  196 (288)
T ss_pred             HHHHHHHHHhCCeeecccC------------cceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc
Confidence            4677889999999999999            669999999999999999997653221  11223345778999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       197 ~~~~~~sDiwsl  208 (288)
T cd05093         197 RKFTTESDVWSL  208 (288)
T ss_pred             CCCCchhhHHHH
Confidence            889999999995

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=2.2e-12  Score=93.00  Aligned_cols=78  Identities=50%  Similarity=0.827  Sum_probs=65.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~-  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++..............++..|+|||.+... 
T Consensus       110 l~~~l~~lh~~~i~h~dl~------------p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~  177 (262)
T cd06613         110 TLKGLAYLHETGKIHRDIK------------GANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVER  177 (262)
T ss_pred             HHHHHHHHHhCCceecCCC------------hhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccc
Confidence            4678889999999999999            669999999999999999987655433333446788899999999766 


Q ss_pred             --CCCccceEecC
Q psy3254         167 --GYDCVADMWSL  177 (177)
Q Consensus       167 --~~~~~~Diws~  177 (177)
                        .++.++|+|||
T Consensus       178 ~~~~~~~~Di~sl  190 (262)
T cd06613         178 KGGYDGKCDIWAL  190 (262)
T ss_pred             cCCcCchhhhHHH
Confidence              78889999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=2.6e-12  Score=93.47  Aligned_cols=78  Identities=59%  Similarity=0.931  Sum_probs=66.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.+...........|+..|+|||++.+..
T Consensus       107 l~~~l~~lh~~~i~h~dl~------------p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  174 (274)
T cd06609         107 VLLGLEYLHEEGKIHRDIK------------AANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSG  174 (274)
T ss_pred             HHHHHHHHHhCCcccCCCC------------HHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCC
Confidence            4677889999999999999            6699999999999999999987654433334467888999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       175 ~~~~sDv~sl  184 (274)
T cd06609         175 YDEKADIWSL  184 (274)
T ss_pred             CCchhhHHHH
Confidence            9999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.24  E-value=2e-12  Score=94.21  Aligned_cols=78  Identities=24%  Similarity=0.362  Sum_probs=63.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.+....  .......++..|+|||++.+
T Consensus       131 i~~~l~~lH~~~i~h~dlk------------p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05049         131 IASGMVYLASQHFVHRDLA------------TRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY  198 (280)
T ss_pred             HHHHHHHHhhCCeeccccc------------cceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc
Confidence            4677789999999999999            669999999999999999987543221  11233446788999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       199 ~~~~~~~Di~sl  210 (280)
T cd05049         199 RKFTTESDVWSF  210 (280)
T ss_pred             CCcchhhhHHHH
Confidence            889999999995

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=3.1e-12  Score=92.41  Aligned_cols=78  Identities=38%  Similarity=0.701  Sum_probs=63.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC---cccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR---NTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.........   ....|+..|+|||++.
T Consensus       113 l~~~l~~lH~~~i~H~dl~------------p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (263)
T cd06625         113 ILEGVEYLHSNMIVHRDIK------------GANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS  180 (263)
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceec
Confidence            4677889999999999999            669999999999999999987653321111   2356788999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++||||+
T Consensus       181 ~~~~~~~~Di~sl  193 (263)
T cd06625         181 GEGYGRKADVWSV  193 (263)
T ss_pred             cCCCCchhhhHHH
Confidence            8889999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.24  E-value=2.1e-12  Score=99.01  Aligned_cols=78  Identities=29%  Similarity=0.479  Sum_probs=64.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.......  ......++..|+|||++.+
T Consensus       246 i~~aL~~LH~~~ivH~dik------------p~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  313 (400)
T cd05105         246 VARGMEFLASKNCVHRDLA------------ARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD  313 (400)
T ss_pred             HHHHHHHHHhCCeeCCCCC------------hHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC
Confidence            4678889999999999999            6699999999999999999986533211  1223456788999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       314 ~~~~~~~DiwSl  325 (400)
T cd05105         314 NLYTTLSDVWSY  325 (400)
T ss_pred             CCCCchhhHHHH
Confidence            889999999995

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.24  E-value=1.9e-12  Score=95.68  Aligned_cols=79  Identities=28%  Similarity=0.386  Sum_probs=63.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--Ccccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+......  .....++..|+|||++.
T Consensus       117 qi~~~L~~LH~~~ivH~dik------------p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (303)
T cd05110         117 QIAKGMMYLEERRLVHRDLA------------ARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH  184 (303)
T ss_pred             HHHHHHHHHhhcCeeccccc------------cceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhc
Confidence            34567789999999999999            66999999999999999999865432211  12234567899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       185 ~~~~~~~~Diwsl  197 (303)
T cd05110         185 YRKFTHQSDVWSY  197 (303)
T ss_pred             cCCCChHHHHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.24  E-value=2.2e-12  Score=93.18  Aligned_cols=79  Identities=27%  Similarity=0.395  Sum_probs=62.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc----CCCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM----AKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+....    .......++..|+|||.
T Consensus       106 ~i~~~l~~lH~~~i~H~dlk------------~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  173 (262)
T cd05058         106 QVAKGMEYLASKKFVHRDLA------------ARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALES  173 (262)
T ss_pred             HHHHHHHHHHhCCccccccC------------cceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhH
Confidence            34677889999999999999            669999999999999999997553211    11112345678999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +....++.++|||||
T Consensus       174 ~~~~~~~~~~Di~sl  188 (262)
T cd05058         174 LQTQKFTTKSDVWSF  188 (262)
T ss_pred             hccCccchHHHHHHH
Confidence            988889999999995

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.24  E-value=2.7e-12  Score=92.98  Aligned_cols=79  Identities=46%  Similarity=0.801  Sum_probs=63.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||+++.+...........|+..|+|||.+.  
T Consensus       114 qi~~~l~~lH~~~i~H~dl~------------p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  181 (267)
T cd06646         114 ETLQGLAYLHSKGKMHRDIK------------GANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVE  181 (267)
T ss_pred             HHHHHHHHHHHCCccccCCC------------HHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccc
Confidence            34678889999999999999            6699999999999999999986643333334457889999999884  


Q ss_pred             -CCCCCccceEecC
Q psy3254         165 -EIGYDCVADMWSL  177 (177)
Q Consensus       165 -~~~~~~~~Diws~  177 (177)
                       ...++.++|+||+
T Consensus       182 ~~~~~~~~~Dvws~  195 (267)
T cd06646         182 KNGGYNQLCDIWAV  195 (267)
T ss_pred             cCCCCcchhhHHHH
Confidence             3457889999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.23  E-value=2.5e-12  Score=93.34  Aligned_cols=77  Identities=25%  Similarity=0.386  Sum_probs=62.8

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ..++.++|..+++|++++            ++|++++.++.++++|||+++.+.....  ......++..|++||++.+.
T Consensus       122 ~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  189 (272)
T cd05075         122 ASGMEYLSSKSFIHRDLA------------ARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADR  189 (272)
T ss_pred             HHHHHHHHHCCeeccccc------------hhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCC
Confidence            577889999999999999            6699999999999999999986543211  11223456789999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       190 ~~~~~~Di~sl  200 (272)
T cd05075         190 VYTTKSDVWSF  200 (272)
T ss_pred             CcChHHHHHHH
Confidence            89999999985

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.23  E-value=2.9e-12  Score=94.33  Aligned_cols=79  Identities=25%  Similarity=0.324  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |.|++++.++.++++|||+++.+....  ...+...++..|+|||++.
T Consensus       137 ~i~~al~~lH~~~i~H~dlk------------p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  204 (295)
T cd05097         137 QIASGMKYLASLNFVHRDLA------------TRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL  204 (295)
T ss_pred             HHHHHHHHHHhcCeeccccC------------hhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhc
Confidence            34677889999999999999            669999999999999999997643221  1122345577899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|+|||
T Consensus       205 ~~~~~~~~DvwSl  217 (295)
T cd05097         205 LGKFTTASDVWAF  217 (295)
T ss_pred             cCCcCchhhHHHH
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.23  E-value=4.2e-12  Score=92.86  Aligned_cols=78  Identities=53%  Similarity=0.806  Sum_probs=63.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC--
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~--  165 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.+...........|+..|+|||++..  
T Consensus       133 i~~~l~~lH~~~i~H~dlk------------p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  200 (286)
T cd06638         133 ALMGLQHLHVNKTIHRDVK------------GNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ  200 (286)
T ss_pred             HHHHHHHHHhCCccccCCC------------HHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhh
Confidence            3677889999999999999            66999999999999999999866443223334568999999999853  


Q ss_pred             ---CCCCccceEecC
Q psy3254         166 ---IGYDCVADMWSL  177 (177)
Q Consensus       166 ---~~~~~~~Diws~  177 (177)
                         ..++.++||||+
T Consensus       201 ~~~~~~~~~~Dv~sl  215 (286)
T cd06638         201 QLDSTYDARCDVWSL  215 (286)
T ss_pred             hccccccchhhhhhH
Confidence               457889999985

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.23  E-value=3.2e-12  Score=91.92  Aligned_cols=78  Identities=26%  Similarity=0.414  Sum_probs=64.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||.+.......  .......++..|+|||.+..
T Consensus       114 l~~al~~lH~~~i~H~di~------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (262)
T cd00192         114 IAKGMEYLASKKFVHRDLA------------ARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKD  181 (262)
T ss_pred             HHHHHHHHHcCCcccCccC------------cceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhcc
Confidence            3678889999999999999            669999999999999999998664432  12233457889999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       182 ~~~~~~~Di~sl  193 (262)
T cd00192         182 GIFTSKSDVWSF  193 (262)
T ss_pred             CCcchhhccHHH
Confidence            889999999985

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.23  E-value=3.4e-12  Score=93.27  Aligned_cols=77  Identities=34%  Similarity=0.470  Sum_probs=63.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.....  ......|+..|+|||++..+
T Consensus       105 ql~~~l~~lH~~~i~H~di~------------p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  170 (278)
T cd05606         105 EIILGLEHMHNRFVVYRDLK------------PANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKG  170 (278)
T ss_pred             HHHHHHHHHHHCCEEcCCCC------------HHHEEECCCCCEEEccCcCccccCcc--CCcCcCCCcCCcCcHHhcCC
Confidence            34677889999999999999            66999999999999999998755432  22345789999999999754


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++||||+
T Consensus       171 ~~~~~~~Di~s~  182 (278)
T cd05606         171 VAYDSSADWFSL  182 (278)
T ss_pred             CCCCcccchHhH
Confidence             68899999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PHA02988 hypothetical protein; Provisional

Probab=99.23  E-value=2.5e-12  Score=94.27  Aligned_cols=75  Identities=13%  Similarity=0.131  Sum_probs=61.3

Q ss_pred             hHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          88 DFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        88 ~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...++.++|. .+++|++++            ++|++++.++.++++|||+++.+...   ....+|+..|+|||++.+ 
T Consensus       131 i~~~l~~lH~~~~~~Hrdlk------------p~nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~  195 (283)
T PHA02988        131 CCKGLYNLYKYTNKPYKNLT------------SVSFLVTENYKLKIICHGLEKILSSP---PFKNVNFMVYFSYKMLNDI  195 (283)
T ss_pred             HHHHHHHHHhcCCCCCCcCC------------hhhEEECCCCcEEEcccchHhhhccc---cccccCcccccCHHHhhhc
Confidence            3567778887 478899999            66999999999999999999865432   123468899999999976 


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..|+.++|||||
T Consensus       196 ~~~~~~k~Di~Sl  208 (283)
T PHA02988        196 FSEYTIKDDIYSL  208 (283)
T ss_pred             cccccchhhhhHH
Confidence             679999999996

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.23  E-value=2.4e-12  Score=94.35  Aligned_cols=78  Identities=40%  Similarity=0.814  Sum_probs=64.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||.+..............|+..|+|||.+.+..
T Consensus       124 l~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  191 (285)
T cd06648         124 VLKALSFLHAQGVIHRDIK------------SDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP  191 (285)
T ss_pred             HHHHHHHHHhCCeecCCCC------------hhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCC
Confidence            4677889999999999999            6699999999999999998875543322233456899999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       192 ~~~~~Dv~sl  201 (285)
T cd06648         192 YGTEVDIWSL  201 (285)
T ss_pred             CCCcccHHHH
Confidence            9999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.23  E-value=2.7e-12  Score=95.34  Aligned_cols=79  Identities=29%  Similarity=0.413  Sum_probs=62.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.......  ......++..|+|||++.
T Consensus       142 qi~~aL~~lH~~gi~H~dlk------------p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  209 (314)
T cd05099         142 QVARGMEYLESRRCIHRDLA------------ARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALF  209 (314)
T ss_pred             HHHHHHHHHHHCCeeecccc------------ceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHc
Confidence            45678889999999999999            6699999999999999999986543211  111223456799999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       210 ~~~~~~~~Diwsl  222 (314)
T cd05099         210 DRVYTHQSDVWSF  222 (314)
T ss_pred             cCCcCccchhhHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0588|consensus

Probab=99.23  E-value=1.2e-11  Score=96.82  Aligned_cols=67  Identities=25%  Similarity=0.407  Sum_probs=62.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |++|+.||.+.|...++.++.++   .|..|..+|.+++||+.+||++||.+|.+.+++++|||+.....
T Consensus       205 LLtG~LPFdDdNir~LLlKV~~G---~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  205 LLTGKLPFDDDNIRVLLLKVQRG---VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS  271 (786)
T ss_pred             HHhCCCCCCCccHHHHHHHHHcC---cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence            58999999999999999999988   77778899999999999999999999999999999999986543

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.23  E-value=2.6e-12  Score=94.75  Aligned_cols=78  Identities=44%  Similarity=0.799  Sum_probs=64.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||.+.+..
T Consensus       124 l~~~L~~LH~~~i~H~dL~------------p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  191 (297)
T cd06656         124 CLQALDFLHSNQVIHRDIK------------SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  191 (297)
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCC
Confidence            3577889999999999999            6699999999999999999876544322333456888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       192 ~~~~~Di~sl  201 (297)
T cd06656         192 YGPKVDIWSL  201 (297)
T ss_pred             CCcHHHHHHH
Confidence            8999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.23  E-value=3.3e-12  Score=101.74  Aligned_cols=65  Identities=25%  Similarity=0.272  Sum_probs=51.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccc-cCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~-~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|+|+|            |+||+++. ++.++++|||+++.+... .......+|++.|+|||.+.
T Consensus       264 ll~aL~yLH~~gIiHRDLK------------P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~  330 (566)
T PLN03225        264 ILFALDGLHSTGIVHRDVK------------PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYI  330 (566)
T ss_pred             HHHHHHHHHHCCEEeCcCC------------HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhh
Confidence            4678899999999999999            67999985 578999999999865332 12234567899999999764

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.23  E-value=4.1e-12  Score=93.32  Aligned_cols=77  Identities=45%  Similarity=0.845  Sum_probs=61.9

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc----
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ----  164 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~----  164 (177)
                      ..++.++|..+++|++++            ++|++++.++.++++|||++..............++..|+|||++.    
T Consensus       120 ~~~l~~lH~~~i~H~dlk------------p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  187 (292)
T cd06644         120 LEALQYLHSMKIIHRDLK------------AGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETM  187 (292)
T ss_pred             HHHHHHHhcCCeeecCCC------------cceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccc
Confidence            577789999999999999            6699999999999999999875433322334456888999999985    


Q ss_pred             -CCCCCccceEecC
Q psy3254         165 -EIGYDCVADMWSL  177 (177)
Q Consensus       165 -~~~~~~~~Diws~  177 (177)
                       ...++.++|+|||
T Consensus       188 ~~~~~~~~~Dv~sl  201 (292)
T cd06644         188 KDTPYDYKADIWSL  201 (292)
T ss_pred             cCCCCCchhhhHhH
Confidence             3457889999985

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.22  E-value=3.2e-12  Score=93.44  Aligned_cols=76  Identities=34%  Similarity=0.506  Sum_probs=62.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-C
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-I  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++......  ......|+..|+|||.+.. .
T Consensus       106 i~~al~~lH~~~ivH~dik------------p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~  171 (279)
T cd05633         106 IILGLEHMHNRFVVYRDLK------------PANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGT  171 (279)
T ss_pred             HHHHHHHHHHCCcCCCCCC------------HHHEEECCCCCEEEccCCcceecccc--CccCcCCCcCccCHHHhcCCC
Confidence            4678889999999999999            66999999999999999998755432  1223468999999999864 5


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+||+
T Consensus       172 ~~~~~~Di~sl  182 (279)
T cd05633         172 AYDSSADWFSL  182 (279)
T ss_pred             CCCchhhhHHH
Confidence            68899999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.22  E-value=3e-12  Score=92.02  Aligned_cols=78  Identities=69%  Similarity=1.061  Sum_probs=65.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..+++.++|..+++|++++            +.|++++.++.++++|||++..............|+..|+|||++.+..
T Consensus       108 l~~~l~~lh~~~i~H~dl~------------~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  175 (256)
T cd06612         108 TLKGLEYLHSNKKIHRDIK------------AGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  175 (256)
T ss_pred             HHHHHHHHHHCCcccCCCC------------cceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCC
Confidence            3578889999999999999            6699999999999999999987654432333456888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       176 ~~~~~Di~s~  185 (256)
T cd06612         176 YNNKADIWSL  185 (256)
T ss_pred             CCchhhHHHH
Confidence            9999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.22  E-value=4.6e-12  Score=91.89  Aligned_cols=79  Identities=22%  Similarity=0.303  Sum_probs=63.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--Ccccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.+......  .....++..|+|||++.
T Consensus       121 ~i~~aL~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  188 (273)
T cd05035         121 DIALGMEYLSNRNFIHRDLA------------ARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA  188 (273)
T ss_pred             HHHHHHHHHHhCCeeccccc------------hheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcc
Confidence            34678889999999999999            66999999999999999999865432111  11223466899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       189 ~~~~~~~~Dv~Sl  201 (273)
T cd05035         189 DRVYTSKSDVWAF  201 (273)
T ss_pred             cCCCCcccchHHH
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.22  E-value=2.2e-12  Score=95.19  Aligned_cols=79  Identities=25%  Similarity=0.434  Sum_probs=63.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.............++..|+|||++.+ 
T Consensus       112 qi~~aL~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  179 (301)
T cd07873         112 QLLRGLNYCHRRKVLHRDLK------------PQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGS  179 (301)
T ss_pred             HHHHHHHHHHhCCeeCCCCC------------HHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCC
Confidence            34678889999999999999            66999999999999999999765433223334467889999999875 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       180 ~~~~~~~Dv~sl  191 (301)
T cd07873         180 TDYSTQIDMWGV  191 (301)
T ss_pred             CCCccHHHHHHH
Confidence            457889999985

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.22  E-value=3.7e-12  Score=93.86  Aligned_cols=77  Identities=27%  Similarity=0.366  Sum_probs=60.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...+++++|..+++|++++            ++|++++.++.++++|||++....... .......+..|+|||++....
T Consensus       128 i~~al~~lH~~~ivH~dlk------------p~Nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~  194 (297)
T cd05089         128 VATGMQYLSEKQFIHRDLA------------ARNVLVGENLASKIADFGLSRGEEVYV-KKTMGRLPVRWMAIESLNYSV  194 (297)
T ss_pred             HHHHHHHHHHCCcccCcCC------------cceEEECCCCeEEECCcCCCcccccee-ccCCCCcCccccCchhhccCC
Confidence            3577889999999999999            669999999999999999986432211 111122345799999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       195 ~~~~~DvwSl  204 (297)
T cd05089         195 YTTKSDVWSF  204 (297)
T ss_pred             CCchhhHHHH
Confidence            9999999996

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0615|consensus

Probab=99.22  E-value=7.8e-12  Score=92.98  Aligned_cols=71  Identities=25%  Similarity=0.277  Sum_probs=57.4

Q ss_pred             CccCCCCCCCCCHH-HHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      +++|.|||.+.... .+..+|.++.+... ..+..+|.+++|||+.||+.||.+|+++.++|+|||+......
T Consensus       374 cLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~  446 (475)
T KOG0615|consen  374 CLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCL  446 (475)
T ss_pred             EeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccccc
Confidence            47999999887544 36677777765444 2256789999999999999999999999999999999976543

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.22  E-value=5.3e-12  Score=92.64  Aligned_cols=78  Identities=53%  Similarity=0.818  Sum_probs=62.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~-  166 (177)
                      ...+++++|..+++|++++            ++|++++.++.++++|||+++.............|+..|+|||++... 
T Consensus       137 i~~al~~lH~~~ivH~dlk------------p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  204 (291)
T cd06639         137 ALLGLQHLHNNRIIHRDVK------------GNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ  204 (291)
T ss_pred             HHHHHHHHHhCCeeccCCC------------HHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCC
Confidence            3677889999999999999            669999999999999999988654332223345688899999998543 


Q ss_pred             ----CCCccceEecC
Q psy3254         167 ----GYDCVADMWSL  177 (177)
Q Consensus       167 ----~~~~~~Diws~  177 (177)
                          .++.++|||||
T Consensus       205 ~~~~~~~~~~Di~sl  219 (291)
T cd06639         205 QYDYSYDARCDVWSL  219 (291)
T ss_pred             CcccccCCccchHHH
Confidence                36789999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.22  E-value=3.4e-12  Score=92.19  Aligned_cols=79  Identities=29%  Similarity=0.391  Sum_probs=62.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---Cccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||+++........   .....++..|+|||.+
T Consensus       103 ~i~~~l~~lH~~~i~H~dlk------------p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  170 (257)
T cd05115         103 QVSMGMKYLEGKNFVHRDLA------------ARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECI  170 (257)
T ss_pred             HHHHHHHHHHhcCeeecccc------------hheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHH
Confidence            34677889999999999999            66999999999999999999765432111   1111235689999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      ....++.++|||||
T Consensus       171 ~~~~~~~~~Di~sl  184 (257)
T cd05115         171 NFRKFSSRSDVWSY  184 (257)
T ss_pred             ccCCCCchhhHHHH
Confidence            88889999999996

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.22  E-value=4.5e-12  Score=93.74  Aligned_cols=77  Identities=30%  Similarity=0.362  Sum_probs=61.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...+++++|..+++|++++            +.|++++.++.++++|||+++..... .......++..|+|||++....
T Consensus       133 i~~al~~LH~~gi~H~dlk------------p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~  199 (303)
T cd05088         133 VARGMDYLSQKQFIHRDLA------------ARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSV  199 (303)
T ss_pred             HHHHHHHHHhCCccccccc------------hheEEecCCCcEEeCccccCcccchh-hhcccCCCcccccCHHHHhccC
Confidence            4677889999999999999            66999999999999999998643211 1111223456799999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       200 ~~~~~Di~sl  209 (303)
T cd05088         200 YTTNSDVWSY  209 (303)
T ss_pred             Ccccccchhh
Confidence            9999999996

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.22  E-value=1.5e-12  Score=93.82  Aligned_cols=79  Identities=39%  Similarity=0.630  Sum_probs=65.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc-C
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-E  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~-~  165 (177)
                      ...+++.++|..+++|++++            +.||+++.++.++++|||.+..............++..|+|||++. +
T Consensus       106 qi~~~L~~Lh~~~i~H~dik------------p~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  173 (260)
T PF00069_consen  106 QILEALAYLHSKGIVHRDIK------------PENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQG  173 (260)
T ss_dssp             HHHHHHHHHHHTTEEESSBS------------GGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTT
T ss_pred             cccccccccccccccccccc------------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34678889999999999999            6699999999999999999875432223344567899999999998 7


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       174 ~~~~~~~Di~sl  185 (260)
T PF00069_consen  174 KKYTRKSDIWSL  185 (260)
T ss_dssp             SSBSTHHHHHHH
T ss_pred             cccccccccccc
Confidence            788999999985

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.21  E-value=5.4e-12  Score=90.84  Aligned_cols=78  Identities=32%  Similarity=0.632  Sum_probs=65.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.............|+..|+|||.+.+..
T Consensus       110 l~~~l~~lh~~~i~h~dl~------------p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  177 (256)
T cd08221         110 IVSAVSYIHKAGILHRDIK------------TLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVK  177 (256)
T ss_pred             HHHHHHHHHhCCccccCCC------------hHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCC
Confidence            3577889999999999999            6699999999999999999986644332334567899999999998877


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       178 ~~~~~Dv~sl  187 (256)
T cd08221         178 YNFKSDIWAL  187 (256)
T ss_pred             CCCcchhHHH
Confidence            8899999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.21  E-value=1.5e-12  Score=95.44  Aligned_cols=79  Identities=25%  Similarity=0.413  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.......  ......++..|+|||.+.
T Consensus       127 ~l~~~l~~lH~~~i~H~dik------------p~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  194 (288)
T cd05061         127 EIADGMAYLNAKKFVHRDLA------------ARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK  194 (288)
T ss_pred             HHHHHHHHHHhCCCcCCCCC------------hheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhc
Confidence            34677889999999999999            6699999999999999999975432211  122234577899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|+|||
T Consensus       195 ~~~~~~~~Dvwsl  207 (288)
T cd05061         195 DGVFTTSSDMWSF  207 (288)
T ss_pred             cCCCChHhHHHHH
Confidence            8889999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.21  E-value=4.2e-12  Score=93.14  Aligned_cols=79  Identities=25%  Similarity=0.413  Sum_probs=63.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||+++.............++..|+|||++.+ 
T Consensus       111 ql~~al~~lH~~~i~H~dl~------------p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  178 (291)
T cd07844         111 QLLRGLAYCHQRRVLHRDLK------------PQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGS  178 (291)
T ss_pred             HHHHHHHHHHhCCeecccCC------------HHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcC
Confidence            45788899999999999999            66999999999999999998754322222223456888999999875 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       179 ~~~~~~~Dv~sl  190 (291)
T cd07844         179 TEYSTSLDMWGV  190 (291)
T ss_pred             cccCcHHHHHHH
Confidence            458889999985

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.21  E-value=5e-12  Score=92.81  Aligned_cols=75  Identities=35%  Similarity=0.589  Sum_probs=64.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..+++.++|..+++|++++            +.|++++.++.++++|||+++.....   .....|++.|+|||.+.+..
T Consensus       110 il~~l~~lH~~~i~H~dl~------------p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~  174 (290)
T cd05580         110 VVLALEYLHSLDIVYRDLK------------PENLLLDSDGYIKITDFGFAKRVKGR---TYTLCGTPEYLAPEIILSKG  174 (290)
T ss_pred             HHHHHHHHHHCCEecCCCC------------HHHEEECCCCCEEEeeCCCccccCCC---CCCCCCCccccChhhhcCCC
Confidence            4688889999999999999            66999999999999999999865433   23456889999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       175 ~~~~~Di~sl  184 (290)
T cd05580         175 YGKAVDWWAL  184 (290)
T ss_pred             CCccccHHHH
Confidence            8899999985

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.21  E-value=4.6e-12  Score=93.27  Aligned_cols=78  Identities=26%  Similarity=0.338  Sum_probs=62.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            |.|++++.++.++++|||+++.+....  ...+...++..|++||+...
T Consensus       139 i~~al~~lH~~~i~H~dlk------------p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  206 (296)
T cd05095         139 IASGMKYLSSLNFVHRDLA------------TRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL  206 (296)
T ss_pred             HHHHHHHHHHCCeecccCC------------hheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc
Confidence            3577889999999999999            669999999999999999997653321  11223345678999999888


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      +.++.++|+|||
T Consensus       207 ~~~~~~~DiwSl  218 (296)
T cd05095         207 GKFTTASDVWAF  218 (296)
T ss_pred             CCccchhhhhHH
Confidence            889999999996

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.21  E-value=5.3e-12  Score=91.16  Aligned_cols=78  Identities=27%  Similarity=0.391  Sum_probs=63.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++....... ......++..|+|||++...
T Consensus       112 l~~~l~~LH~~~i~H~dl~------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (261)
T cd05072         112 IAEGMAYIERKNYIHRDLR------------AANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG  179 (261)
T ss_pred             HHHHHHHHHHCCeeccccc------------hhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccC
Confidence            3677889999999999999            6699999999999999999986543211 11223456789999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       180 ~~~~~~Di~sl  190 (261)
T cd05072         180 SFTIKSDVWSF  190 (261)
T ss_pred             CCChhhhhhhh
Confidence            89999999996

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.21  E-value=5.8e-12  Score=92.10  Aligned_cols=78  Identities=28%  Similarity=0.497  Sum_probs=62.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.+.....   ......++..|+|||.+.
T Consensus       116 l~~~l~~lH~~~i~H~dlk------------p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~  183 (283)
T cd05080         116 ICEGMAYLHSQHYIHRDLA------------ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLK  183 (283)
T ss_pred             HHHHHHHHHHCCeeccccC------------hheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhc
Confidence            3577789999999999999            6699999999999999999986543211   112234566799999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       184 ~~~~~~~~Di~sl  196 (283)
T cd05080         184 ENKFSYASDVWSF  196 (283)
T ss_pred             ccCCCcccccHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.21  E-value=4.3e-12  Score=91.78  Aligned_cols=78  Identities=29%  Similarity=0.617  Sum_probs=65.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.............|+..|+|||.+.+..
T Consensus       115 l~~~l~~lh~~~i~h~dl~------------p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  182 (267)
T cd08224         115 LCSALEHMHSKRIMHRDIK------------PANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  182 (267)
T ss_pred             HHHHHHHHHhCCEecCCcC------------hhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCC
Confidence            3677889999999999999            6699999999999999999876544322333456888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       183 ~~~~~Di~sl  192 (267)
T cd08224         183 YNFKSDIWSL  192 (267)
T ss_pred             CCchhcHHHH
Confidence            9999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.21  E-value=4e-12  Score=92.88  Aligned_cols=78  Identities=28%  Similarity=0.505  Sum_probs=64.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-C
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-I  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++..+...........++..|+|||++.+ .
T Consensus       109 l~~~l~~LH~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  176 (286)
T cd07847         109 TLQAVNFCHKHNCIHRDVK------------PENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDT  176 (286)
T ss_pred             HHHHHHHHHHCCceecCCC------------hhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCC
Confidence            4678889999999999999            66999999999999999999876544323334567889999999876 4


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       177 ~~~~~~Di~sl  187 (286)
T cd07847         177 QYGPPVDVWAI  187 (286)
T ss_pred             CcCchhhhHHH
Confidence            57889999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.21  E-value=4.1e-12  Score=92.83  Aligned_cols=79  Identities=24%  Similarity=0.322  Sum_probs=63.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.......  ......++..|+|||++.
T Consensus       130 qi~~al~~LH~~~i~H~dlk------------p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (280)
T cd05092         130 QIASGMVYLASLHFVHRDLA------------TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL  197 (280)
T ss_pred             HHHHHHHHHHHCCeeccccc------------HhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhc
Confidence            34677889999999999999            6699999999999999999875432211  122334567899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       198 ~~~~~~~~Di~sl  210 (280)
T cd05092         198 YRKFTTESDIWSF  210 (280)
T ss_pred             cCCcCchhhHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.21  E-value=4e-12  Score=95.14  Aligned_cols=79  Identities=25%  Similarity=0.453  Sum_probs=63.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.+.....    .....+|+..|+|||+
T Consensus       113 qi~~aL~~LH~~givH~dlk------------p~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~  180 (332)
T cd07857         113 QILCGLKYIHSANVLHRDLK------------PGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEI  180 (332)
T ss_pred             HHHHHHHHHHhCCcccCCCC------------HHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHH
Confidence            34678889999999999999            6699999999999999999986543211    1233578999999998


Q ss_pred             ccC-CCCCccceEecC
Q psy3254         163 IQE-IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~-~~~~~~~Diws~  177 (177)
                      +.+ ..++.++|+||+
T Consensus       181 ~~~~~~~~~~~Di~sl  196 (332)
T cd07857         181 MLSFQSYTKAIDVWSV  196 (332)
T ss_pred             HhCCCCCCcHHHHHHH
Confidence            866 468899999985

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.20  E-value=4.8e-12  Score=92.96  Aligned_cols=79  Identities=28%  Similarity=0.450  Sum_probs=64.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.............++..|+|||.+.+.
T Consensus       114 qi~~aL~~LH~~~i~H~dl~------------p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  181 (293)
T cd07843         114 QLLSGVAHLHDNWILHRDLK------------TSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGA  181 (293)
T ss_pred             HHHHHHHHHHHCCeeeccCC------------HHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCC
Confidence            34688889999999999999            669999999999999999998765432233345678899999998764


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++|+||+
T Consensus       182 ~~~~~~~Di~sl  193 (293)
T cd07843         182 KEYSTAIDMWSV  193 (293)
T ss_pred             ccccchhhHHHH
Confidence             46889999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.20  E-value=4.9e-12  Score=91.61  Aligned_cols=78  Identities=38%  Similarity=0.682  Sum_probs=63.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---CCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++......   .......|+..|+|||++.
T Consensus       115 l~~~l~~lH~~~i~H~dl~------------p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (265)
T cd06652         115 ILEGVSYLHSNMIVHRDIK------------GANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS  182 (265)
T ss_pred             HHHHHHHHHhCCEecCCCC------------HHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhc
Confidence            4677889999999999999            669999999999999999987643211   1122346888999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|+|||
T Consensus       183 ~~~~~~~~Dv~sl  195 (265)
T cd06652         183 GEGYGRKADIWSV  195 (265)
T ss_pred             CCCCCcchhHHHH
Confidence            8888999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.20  E-value=3.1e-12  Score=93.23  Aligned_cols=78  Identities=56%  Similarity=0.908  Sum_probs=65.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..+++.++|..+++|++++            ++|++++.++.++++|||+++.+...........|+..|+|||++.+..
T Consensus       110 i~~~l~~lH~~~ivH~dl~------------p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (277)
T cd06642         110 ILKGLDYLHSERKIHRDIK------------AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA  177 (277)
T ss_pred             HHHHHHHHhcCCeeccCCC------------hheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCC
Confidence            4677889999999999999            6699999999999999999976654322333456888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       178 ~~~~~Dv~sl  187 (277)
T cd06642         178 YDFKADIWSL  187 (277)
T ss_pred             CchhhhHHHH
Confidence            9999999985

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.20  E-value=4.2e-12  Score=91.48  Aligned_cols=75  Identities=29%  Similarity=0.553  Sum_probs=61.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.....   .....++..|+|||++.+..
T Consensus       111 i~~~l~~lH~~~i~H~dlk------------p~nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~  175 (256)
T cd05082         111 VCEAMEYLEANNFVHRDLA------------ARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALREKK  175 (256)
T ss_pred             HHHHHHHHHhCCEeccccc------------hheEEEcCCCcEEecCCccceecccc---CCCCccceeecCHHHHccCC
Confidence            4677889999999999999            66999999999999999998754332   12234566899999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       176 ~~~~~Dv~sl  185 (256)
T cd05082         176 FSTKSDVWSF  185 (256)
T ss_pred             CCchhhhHHH
Confidence            9999999985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.20  E-value=4.8e-12  Score=94.90  Aligned_cols=79  Identities=29%  Similarity=0.471  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      +..+++.++|..+++|++++            ++|++++.++.++++|||+++.......   .....+|+..|+|||++
T Consensus       114 ql~~aL~~LH~~~ivH~dlk------------p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (336)
T cd07849         114 QILRGLKYIHSANVLHRDLK------------PSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIM  181 (336)
T ss_pred             HHHHHHHHHHhCCeeccCCC------------HHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHh
Confidence            34678889999999999999            6699999999999999999976543211   12235789999999987


Q ss_pred             cC-CCCCccceEecC
Q psy3254         164 QE-IGYDCVADMWSL  177 (177)
Q Consensus       164 ~~-~~~~~~~Diws~  177 (177)
                      .+ ..++.++||||+
T Consensus       182 ~~~~~~~~~~Dvwsl  196 (336)
T cd07849         182 LNSKGYTKAIDIWSV  196 (336)
T ss_pred             hCCCCCCcHHHHHHH
Confidence            65 568899999985

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.20  E-value=5.3e-12  Score=92.63  Aligned_cols=79  Identities=27%  Similarity=0.381  Sum_probs=63.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |+|++++.++.++++|||+++.......  ......++..|+|||.+.
T Consensus       135 ~i~~~l~~LH~~~ivH~dik------------p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~  202 (290)
T cd05045         135 QISRGMQYLAEMKLVHRDLA------------ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLF  202 (290)
T ss_pred             HHHHHHHHHHHCCeehhhhh------------hheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHc
Confidence            34678889999999999999            6699999999999999999976532211  112234567899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       203 ~~~~~~~~Di~sl  215 (290)
T cd05045         203 DHIYTTQSDVWSF  215 (290)
T ss_pred             cCCcchHhHHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.19  E-value=4.3e-12  Score=91.57  Aligned_cols=78  Identities=27%  Similarity=0.383  Sum_probs=63.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||.+..............++..|+|||++....
T Consensus       113 i~~al~~lH~~~i~h~dl~------------~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  180 (261)
T cd05148         113 VAEGMAYLEEQNSIHRDLA------------ARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGT  180 (261)
T ss_pred             HHHHHHHHHHCCeeccccC------------cceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCC
Confidence            3577889999999999999            6699999999999999999976644322222334567899999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       181 ~~~~~Diwsl  190 (261)
T cd05148         181 FSTKSDVWSF  190 (261)
T ss_pred             CCchhhHHHH
Confidence            9999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.19  E-value=5.1e-12  Score=93.58  Aligned_cols=79  Identities=28%  Similarity=0.422  Sum_probs=63.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.............++..|+|||++.+ 
T Consensus       116 qi~~~l~~lH~~~i~H~dl~------------p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (309)
T cd07845         116 QLLRGLQYLHENFIIHRDLK------------VSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGC  183 (309)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCC
Confidence            34678889999999999999            66999999999999999999876543222233456788999999875 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       184 ~~~~~~~Dvwsl  195 (309)
T cd07845         184 TTYTTAIDMWAV  195 (309)
T ss_pred             CCcCchHHHHHH
Confidence            568899999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.19  E-value=5.2e-12  Score=91.11  Aligned_cols=78  Identities=28%  Similarity=0.421  Sum_probs=62.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---Ccccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            |.|++++.++.++++|||+++.+......   .....++..|+|||.+.
T Consensus       104 i~~al~~lH~~~i~H~dlk------------p~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  171 (257)
T cd05116         104 VSMGMKYLEETNFVHRDLA------------ARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMN  171 (257)
T ss_pred             HHHHHHHHHHCCEeecccc------------hhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhc
Confidence            4677889999999999999            66999999999999999999865433211   11223457899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|+|||
T Consensus       172 ~~~~~~~~Di~sl  184 (257)
T cd05116         172 YYKFSSKSDVWSF  184 (257)
T ss_pred             cCCcCchhHHHHH
Confidence            8888999999995

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.19  E-value=5.8e-12  Score=93.24  Aligned_cols=78  Identities=28%  Similarity=0.426  Sum_probs=61.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.......  ......++..|+|||++.+
T Consensus       149 i~~aL~~lH~~gi~H~dlk------------p~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (307)
T cd05098         149 VARGMEYLASKKCIHRDLA------------ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  216 (307)
T ss_pred             HHHHHHHHHHCCccccccc------------HHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc
Confidence            3577889999999999999            6699999999999999999876532211  1111234568999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       217 ~~~~~~~Dvwsl  228 (307)
T cd05098         217 RIYTHQSDVWSF  228 (307)
T ss_pred             CCCCcHHHHHHH
Confidence            889999999995

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.19  E-value=6.5e-12  Score=94.10  Aligned_cols=79  Identities=27%  Similarity=0.399  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--Ccccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++........  .....++..|+|||++.
T Consensus       142 qi~~al~~LH~~givH~dlk------------p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  209 (334)
T cd05100         142 QVARGMEYLASQKCIHRDLA------------ARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALF  209 (334)
T ss_pred             HHHHHHHHHHHCCeeccccc------------cceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhc
Confidence            45678889999999999999            66999999999999999999865432111  12223456799999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       210 ~~~~~~~~Di~sl  222 (334)
T cd05100         210 DRVYTHQSDVWSF  222 (334)
T ss_pred             cCCcCchhhhHHH
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.18  E-value=6e-12  Score=94.70  Aligned_cols=79  Identities=30%  Similarity=0.458  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||+++.......  ......++..|+|||++.
T Consensus       187 qi~~al~~lH~~~i~H~dik------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  254 (343)
T cd05103         187 QVAKGMEFLASRKCIHRDLA------------ARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  254 (343)
T ss_pred             HHHHHHHHHHhCCeecCCCc------------cCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhc
Confidence            45678889999999999999            6699999999999999999976532211  122234567899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       255 ~~~~~~~~Di~sl  267 (343)
T cd05103         255 DRVYTIQSDVWSF  267 (343)
T ss_pred             CCCCCchhhHHHH
Confidence            8889999999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG4717|consensus

Probab=99.18  E-value=3.9e-11  Score=92.04  Aligned_cols=68  Identities=24%  Similarity=0.505  Sum_probs=61.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      |+||++||...|..+.+.+|+..   .+..|..+|.+|+|||..||++||.+|.+.+++..++|++....+
T Consensus       212 LVCGq~PFqeANDSETLTmImDC---KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~  279 (864)
T KOG4717|consen  212 LVCGQPPFQEANDSETLTMIMDC---KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG  279 (864)
T ss_pred             HHhCCCccccccchhhhhhhhcc---cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence            57999999999999999999988   666688899999999999999999999999999999999865443

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.18  E-value=6.4e-12  Score=92.05  Aligned_cols=77  Identities=40%  Similarity=0.726  Sum_probs=61.5

Q ss_pred             hHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++++|.. +++|++++            ++|++++.++.++++|||+++.+.... ......|+..|+|||++...
T Consensus       116 i~~~l~~lh~~~~i~H~dlk------------p~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  182 (288)
T cd06616         116 TVKALNYLKEELKIIHRDVK------------PSNILLDRNGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPS  182 (288)
T ss_pred             HHHHHHHHhhcCCeeccCCC------------HHHEEEccCCcEEEeecchhHHhccCC-ccccccCccCccCHHHhccc
Confidence            35677889864 89999999            669999999999999999997654332 12234688899999999765


Q ss_pred             ---CCCccceEecC
Q psy3254         167 ---GYDCVADMWSL  177 (177)
Q Consensus       167 ---~~~~~~Diws~  177 (177)
                         .++.++||||+
T Consensus       183 ~~~~~~~~~Di~sl  196 (288)
T cd06616         183 ARDGYDVRSDVWSL  196 (288)
T ss_pred             cccCCcchhhhhHH
Confidence               68899999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.18  E-value=8.3e-12  Score=91.88  Aligned_cols=78  Identities=44%  Similarity=0.802  Sum_probs=64.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..............|++.|++||.+....
T Consensus       124 l~~al~~LH~~gi~H~dL~------------p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  191 (293)
T cd06647         124 CLQALEFLHSNQVIHRDIK------------SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  191 (293)
T ss_pred             HHHHHHHHHhCCEeeccCC------------HHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCC
Confidence            3567889999999999999            6699999999999999999876544333334456888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       192 ~~~~~Dv~sl  201 (293)
T cd06647         192 YGPKVDIWSL  201 (293)
T ss_pred             CCchhhHHHH
Confidence            8999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG1152|consensus

Probab=99.18  E-value=6.1e-12  Score=97.20  Aligned_cols=74  Identities=30%  Similarity=0.482  Sum_probs=61.4

Q ss_pred             HHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCCC
Q psy3254          90 EFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD  169 (177)
Q Consensus        90 ~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~~  169 (177)
                      -+++.+|.++++||++|            -+|++++.+|.+|+.|||.+.....  ..-..++||..|.|||++.+.+|-
T Consensus       681 agi~hlh~~~ivhrdik------------denvivd~~g~~klidfgsaa~~ks--gpfd~f~gtv~~aapevl~g~~y~  746 (772)
T KOG1152|consen  681 AGIKHLHDQGIVHRDIK------------DENVIVDSNGFVKLIDFGSAAYTKS--GPFDVFVGTVDYAAPEVLGGEKYL  746 (772)
T ss_pred             hccccccccCceecccc------------cccEEEecCCeEEEeeccchhhhcC--CCcceeeeeccccchhhhCCCccC
Confidence            34458999999999999            4599999999999999998865433  234568999999999999998875


Q ss_pred             -ccceEecC
Q psy3254         170 -CVADMWSL  177 (177)
Q Consensus       170 -~~~Diws~  177 (177)
                       ..-|||++
T Consensus       747 gk~qdiwal  755 (772)
T KOG1152|consen  747 GKPQDIWAL  755 (772)
T ss_pred             CCcchhhhh
Confidence             55799985

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.18  E-value=5.6e-12  Score=91.61  Aligned_cols=77  Identities=30%  Similarity=0.362  Sum_probs=60.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++..... ........+..|+|||++....
T Consensus       121 i~~al~~lH~~~i~H~dik------------p~nili~~~~~~kl~dfgl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~  187 (270)
T cd05047         121 VARGMDYLSQKQFIHRDLA------------ARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSV  187 (270)
T ss_pred             HHHHHHHHHHCCEeecccc------------cceEEEcCCCeEEECCCCCccccchh-hhccCCCCccccCChHHHccCC
Confidence            3577889999999999999            66999999999999999998642211 1111123356799999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       188 ~~~~~Di~sl  197 (270)
T cd05047         188 YTTNSDVWSY  197 (270)
T ss_pred             CCchhhHHHH
Confidence            9999999996

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.18  E-value=8.4e-12  Score=90.46  Aligned_cols=78  Identities=40%  Similarity=0.695  Sum_probs=63.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---CCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.+....   .......|+..|+|||++.
T Consensus       115 i~~~l~~LH~~~i~H~~l~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (266)
T cd06651         115 ILEGMSYLHSNMIVHRDIK------------GANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS  182 (266)
T ss_pred             HHHHHHHHHhCCeeeCCCC------------HHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhC
Confidence            4677889999999999999            669999999999999999987553211   1112345888999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|+||+
T Consensus       183 ~~~~~~~~Dv~sl  195 (266)
T cd06651         183 GEGYGRKADVWSL  195 (266)
T ss_pred             CCCCCchhhhHHH
Confidence            8889999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.18  E-value=5.8e-12  Score=90.71  Aligned_cols=75  Identities=29%  Similarity=0.416  Sum_probs=61.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-------CeEEeeeecccccccccCCCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-------HAKLADFGVAGQLTDTMAKRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-------~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~a  159 (177)
                      ....++.++|..+++|++++            +.|++++.++       .++++|||++.....    .....++..|+|
T Consensus       109 ~i~~~l~~LH~~~i~H~dlk------------p~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~y~a  172 (259)
T cd05037         109 QLASALHYLEDKKLVHGNVC------------GKNILVARYGLNEGYVPFIKLSDPGIPITVLS----REERVERIPWIA  172 (259)
T ss_pred             HHHHHHHHHhhCCeecccCc------------cceEEEecCccccCCceeEEeCCCCccccccc----ccccccCCCccC
Confidence            34677889999999999999            6699998877       799999999876543    223456778999


Q ss_pred             cccccCC--CCCccceEecC
Q psy3254         160 PEVIQEI--GYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~~--~~~~~~Diws~  177 (177)
                      ||++.+.  .++.++|||||
T Consensus       173 PE~~~~~~~~~~~~~Di~sl  192 (259)
T cd05037         173 PECIRNGQASLTIAADKWSF  192 (259)
T ss_pred             hhhhcCCCCCcchhhHHHHH
Confidence            9999876  78899999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.18  E-value=7.7e-12  Score=91.42  Aligned_cols=79  Identities=27%  Similarity=0.458  Sum_probs=64.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||++..+...........++..|+|||++.+ 
T Consensus       108 ~i~~~l~~LH~~~i~h~~l~------------p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07846         108 QILRGIEFCHSHNIIHRDIK------------PENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             HHHHHHHHHHHCCccccCCC------------HHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccc
Confidence            34677889999999999999            66999999999999999999866443333344568889999999875 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       176 ~~~~~~~Dv~sl  187 (286)
T cd07846         176 TKYGRAVDIWAV  187 (286)
T ss_pred             cccCchHhHHHH
Confidence            457889999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.18  E-value=5.8e-12  Score=91.16  Aligned_cols=79  Identities=23%  Similarity=0.357  Sum_probs=62.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||+++........ .....++..|+|||.+.+
T Consensus       112 ql~~~l~~lH~~~i~H~dlk------------p~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  179 (263)
T cd05052         112 QISSAMEYLEKKNFIHRDLA------------ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY  179 (263)
T ss_pred             HHHHHHHHHHhCCEeecccC------------cceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhcc
Confidence            34677889999999999999            66999999999999999999765432111 112234567999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       180 ~~~~~~~Dv~sl  191 (263)
T cd05052         180 NKFSIKSDVWAF  191 (263)
T ss_pred             CCCCchhHHHHH
Confidence            889999999985

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.18  E-value=7.4e-12  Score=93.92  Aligned_cols=79  Identities=27%  Similarity=0.440  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.............|+..|+|||.+.. 
T Consensus       116 qi~~aL~~LH~~~i~H~dlk------------p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (337)
T cd07858         116 QLLRGLKYIHSANVLHRDLK------------PSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNC  183 (337)
T ss_pred             HHHHHHHHHHhCCEecCCCC------------HHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcC
Confidence            44678889999999999999            66999999999999999999865433233344568889999998865 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       184 ~~~~~~~Diwsl  195 (337)
T cd07858         184 SEYTTAIDVWSV  195 (337)
T ss_pred             CCCCCcccHHHH
Confidence            468899999985

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.17  E-value=7.2e-12  Score=90.75  Aligned_cols=75  Identities=31%  Similarity=0.457  Sum_probs=60.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC-------eEEeeeecccccccccCCCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH-------AKLADFGVAGQLTDTMAKRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~-------~~l~dfg~~~~~~~~~~~~~~~~g~~~y~a  159 (177)
                      ...+++.++|..+++|++++            |+|++++.++.       ++++|||++......    ....|+..|+|
T Consensus       113 qi~~~l~~lH~~~ivH~dlk------------p~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~----~~~~~~~~y~a  176 (262)
T cd05077         113 QLASALSYLEDKDLVHGNVC------------TKNILLAREGIDGECGPFIKLSDPGIPITVLSR----QECVERIPWIA  176 (262)
T ss_pred             HHHHHHHHhhhCCeECCCCC------------cccEEEecCCccCCCCceeEeCCCCCCccccCc----ccccccccccC
Confidence            44678889999999999999            66999976653       899999988654322    23467889999


Q ss_pred             ccccc-CCCCCccceEecC
Q psy3254         160 PEVIQ-EIGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~-~~~~~~~~Diws~  177 (177)
                      ||++. +..++.++|||||
T Consensus       177 PE~~~~~~~~~~~~Diwsl  195 (262)
T cd05077         177 PECVEDSKNLSIAADKWSF  195 (262)
T ss_pred             hhhhcCCCCCCchhHHHHH
Confidence            99987 4678899999996

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.17  E-value=1e-11  Score=89.90  Aligned_cols=79  Identities=35%  Similarity=0.667  Sum_probs=64.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC------CCcccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA------KRNTVIGTPFWMAP  160 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~------~~~~~~g~~~y~aP  160 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||.++.......      ......|+..|+||
T Consensus       114 ~l~~~l~~lH~~~ivH~di~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~p  181 (267)
T cd06628         114 QILKGLNYLHNRGIIHRDIK------------GANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP  181 (267)
T ss_pred             HHHHHHHHHHhcCcccccCC------------HHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccCh
Confidence            34677889999999999999            6699999999999999999886642111      11234588899999


Q ss_pred             ccccCCCCCccceEecC
Q psy3254         161 EVIQEIGYDCVADMWSL  177 (177)
Q Consensus       161 e~~~~~~~~~~~Diws~  177 (177)
                      |.+.+..++.++|+||+
T Consensus       182 e~~~~~~~~~~~Dv~sl  198 (267)
T cd06628         182 EVVKQTSYTRKADIWSL  198 (267)
T ss_pred             hHhccCCCCchhhhHHH
Confidence            99988889999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.17  E-value=1.4e-11  Score=88.97  Aligned_cols=77  Identities=38%  Similarity=0.591  Sum_probs=64.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++...... ......|+..|++||.+....
T Consensus       102 i~~~l~~lH~~~~~h~dl~------------~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~  168 (262)
T cd05572         102 VVLAFEYLHNRGIIYRDLK------------PENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEYVAPEIILNKG  168 (262)
T ss_pred             HHHHHHHHhhCCcccCCCC------------HHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCccChhHhcCCC
Confidence            4678889999999999999            669999999999999999998664432 223356888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       169 ~~~~~Di~sl  178 (262)
T cd05572         169 YDFSVDYWSL  178 (262)
T ss_pred             CCChhhhhhh
Confidence            8999999985

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=8.1e-12  Score=90.58  Aligned_cols=79  Identities=47%  Similarity=0.806  Sum_probs=63.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||++..............|+..|+|||++.. 
T Consensus       121 ql~~al~~lH~~~i~H~~l~------------p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  188 (275)
T cd06608         121 ETLRGLAYLHENKVIHRDIK------------GQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACD  188 (275)
T ss_pred             HHHHHHHHHhcCCcccCCCC------------HHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhccc
Confidence            35788889999999999999            66999999999999999998765443333344678999999998853 


Q ss_pred             ----CCCCccceEecC
Q psy3254         166 ----IGYDCVADMWSL  177 (177)
Q Consensus       166 ----~~~~~~~Diws~  177 (177)
                          ..++.++|||||
T Consensus       189 ~~~~~~~~~~~Dv~sl  204 (275)
T cd06608         189 EQPDASYDARSDVWSL  204 (275)
T ss_pred             ccccCCccccccHHHh
Confidence                346788999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.17  E-value=7.1e-12  Score=92.26  Aligned_cols=78  Identities=37%  Similarity=0.759  Sum_probs=64.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..+...........|+..|+|||.+....
T Consensus       125 l~~~l~~lH~~givH~dl~------------p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~  192 (292)
T cd06657         125 VLKALSVLHAQGVIHRDIK------------SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP  192 (292)
T ss_pred             HHHHHHHHHHCCeecCCCC------------HHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCC
Confidence            4677889999999999999            6699999999999999998876543322233456889999999998878


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       193 ~~~~~Dv~sl  202 (292)
T cd06657         193 YGPEVDIWSL  202 (292)
T ss_pred             CCchhhHHHH
Confidence            8999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG4250|consensus

Probab=99.17  E-value=7.6e-12  Score=98.35  Aligned_cols=76  Identities=32%  Similarity=0.571  Sum_probs=63.5

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC--CCC--CeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN--TEG--HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~--~~~--~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ..+++++|..+|+|||+|            |.||++-  .+|  -.|++|||.||.+.+.. ....++||..|.+||...
T Consensus       130 ~~al~~LrEn~IvHRDlK------------P~NIvl~~Gedgq~IyKLtDfG~Arel~d~s-~~~S~vGT~~YLhPel~E  196 (732)
T KOG4250|consen  130 VSALRHLRENGIVHRDLK------------PGNIVLQIGEDGQSIYKLTDFGAARELDDNS-LFTSLVGTEEYLHPELYE  196 (732)
T ss_pred             HHHHHHHHHcCceeccCC------------CCcEEEeecCCCceEEeeecccccccCCCCC-eeeeecCchhhcChHHHh
Confidence            466779999999999999            5699873  333  37999999999887653 566789999999999998


Q ss_pred             -CCCCCccceEecC
Q psy3254         165 -EIGYDCVADMWSL  177 (177)
Q Consensus       165 -~~~~~~~~Diws~  177 (177)
                       ...|+..+|.|||
T Consensus       197 ~q~~y~~tVDLWS~  210 (732)
T KOG4250|consen  197 RQKKYTATVDLWSF  210 (732)
T ss_pred             hccCcCceeehhhh
Confidence             4789999999996

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.17  E-value=9.3e-12  Score=92.03  Aligned_cols=78  Identities=29%  Similarity=0.445  Sum_probs=62.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.+.....  ......++..|+|||.+.+
T Consensus       150 i~~~l~~lH~~~ivH~dlk------------p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  217 (302)
T cd05055         150 VAKGMAFLASKNCIHRDLA------------ARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN  217 (302)
T ss_pred             HHHHHHHHHHCCeehhhhc------------cceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc
Confidence            4567789999999999999            6699999999999999999986543211  1222346778999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       218 ~~~~~~~Diwsl  229 (302)
T cd05055         218 CVYTFESDVWSY  229 (302)
T ss_pred             CCCCcHhHHHHH
Confidence            889999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.17  E-value=7.5e-12  Score=90.12  Aligned_cols=79  Identities=24%  Similarity=0.441  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---Cccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPe~~  163 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||+++.+......   .....++..|+|||++
T Consensus       105 qi~~~L~~lH~~~i~H~di~------------p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~  172 (257)
T cd05040         105 QIANGMRYLESKRFIHRDLA------------ARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESL  172 (257)
T ss_pred             HHHHHHHHHHhCCccccccC------------cccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHh
Confidence            34678889999999999999            66999999999999999999876432111   1224567789999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       173 ~~~~~~~~~Di~sl  186 (257)
T cd05040         173 RTRTFSHASDVWMF  186 (257)
T ss_pred             cccCcCchhhhHHH
Confidence            88889999999985

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.17  E-value=9e-12  Score=93.05  Aligned_cols=79  Identities=28%  Similarity=0.430  Sum_probs=65.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---CCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||++.......   .......++..|+|||++
T Consensus       111 ~l~~~l~~LH~~gi~H~dlk------------p~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  178 (330)
T cd07834         111 QILRGLKYLHSANVIHRDLK------------PSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELL  178 (330)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceee
Confidence            34677889999999999999            669999999999999999998765432   123345688899999999


Q ss_pred             cCC-CCCccceEecC
Q psy3254         164 QEI-GYDCVADMWSL  177 (177)
Q Consensus       164 ~~~-~~~~~~Diws~  177 (177)
                      .+. .++.++|+||+
T Consensus       179 ~~~~~~~~~sDi~sl  193 (330)
T cd07834         179 LSSSRYTKAIDIWSV  193 (330)
T ss_pred             ecccCCCcchhHHHH
Confidence            876 78999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.16  E-value=1.1e-11  Score=89.56  Aligned_cols=79  Identities=29%  Similarity=0.397  Sum_probs=63.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||++....... .......++..|+|||++..
T Consensus       110 ~i~~al~~LH~~~i~H~dl~------------p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~  177 (260)
T cd05067         110 QIAEGMAFIERKNYIHRDLR------------AANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY  177 (260)
T ss_pred             HHHHHHHHHhcCCeeccccc------------HHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhcc
Confidence            34677889999999999999            669999999999999999997654221 11122345678999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       178 ~~~~~~~Di~sl  189 (260)
T cd05067         178 GTFTIKSDVWSF  189 (260)
T ss_pred             CCcCcccchHHH
Confidence            889999999985

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.16  E-value=9.1e-12  Score=89.79  Aligned_cols=78  Identities=27%  Similarity=0.366  Sum_probs=61.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC---cccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR---NTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.+.......   ....++..|+|||.+.
T Consensus       104 i~~~l~~lh~~~i~H~di~------------p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  171 (257)
T cd05060         104 VAMGMAYLESKHFVHRDLA------------ARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECIN  171 (257)
T ss_pred             HHHHHHHHhhcCeeccCcc------------cceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhc
Confidence            3677889999999999999            669999999999999999998654322111   1122346799999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       172 ~~~~~~~~Di~sl  184 (257)
T cd05060         172 YGKFSSKSDVWSY  184 (257)
T ss_pred             CCCCCccchHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.16  E-value=9.1e-12  Score=89.77  Aligned_cols=78  Identities=26%  Similarity=0.434  Sum_probs=61.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++........ .....++..|+|||.+.+.
T Consensus       109 i~~~l~~lH~~~i~H~dl~------------p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  176 (256)
T cd05059         109 VCEAMEYLESNGFIHRDLA------------ARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYS  176 (256)
T ss_pred             HHHHHHHHHHCCccccccc------------HhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccC
Confidence            3567789999999999999            66999999999999999998765432111 1112234579999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       177 ~~~~~~Di~sl  187 (256)
T cd05059         177 RFSSKSDVWSF  187 (256)
T ss_pred             CCCchhhHHHH
Confidence            89999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.16  E-value=9.6e-12  Score=89.67  Aligned_cols=79  Identities=33%  Similarity=0.533  Sum_probs=65.6

Q ss_pred             chHHHHhhhc-----hhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccc
Q psy3254          87 CDFEFLKFLS-----YDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE  161 (177)
Q Consensus        87 ~~~~~l~~l~-----~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe  161 (177)
                      ....++.++|     ..+++|++++            ++||+++.++.++++|||++..............|+..|+|||
T Consensus       113 ~i~~~l~~lH~~~~~~~~i~h~dl~------------p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE  180 (265)
T cd08217         113 QLLLALYECHNRSDPGNTVLHRDLK------------PANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPE  180 (265)
T ss_pred             HHHHHHHHHhcCccccCcceecCCC------------HHHEEEecCCCEEEecccccccccCCcccccccccCCCccChh
Confidence            3467788999     8889999999            6699999999999999999987654432233457899999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      ++....++.++|+|||
T Consensus       181 ~~~~~~~~~~~Dv~sl  196 (265)
T cd08217         181 QLNHMSYDEKSDIWSL  196 (265)
T ss_pred             hhcCCCCCchhHHHHH
Confidence            9988888999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.16  E-value=8.2e-12  Score=91.30  Aligned_cols=78  Identities=29%  Similarity=0.537  Sum_probs=61.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---Ccccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++.+......   .....++..|+|||++.
T Consensus       117 l~~aL~~LH~~~i~H~dlk------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (284)
T cd05081         117 ICKGMEYLGSKRYVHRDLA------------TRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLT  184 (284)
T ss_pred             HHHHHHHHHHCCceeccCC------------HhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhc
Confidence            4678889999999999999            66999999999999999999865432111   11122345699999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       185 ~~~~~~~~Di~sl  197 (284)
T cd05081         185 ESKFSVASDVWSF  197 (284)
T ss_pred             cCCcChHHHHHHH
Confidence            8889999999995

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.16  E-value=1.1e-11  Score=89.73  Aligned_cols=77  Identities=32%  Similarity=0.466  Sum_probs=61.7

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--CccccccccccccccccCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~~~  166 (177)
                      ..++.++|..+++|++++            +.|++++.++.++++|||+++........  .....++..|+|||.+.+.
T Consensus       116 ~~~l~~Lh~~~i~H~di~------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  183 (266)
T cd05033         116 ASGMKYLSEMNYVHRDLA------------ARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYR  183 (266)
T ss_pred             HHHHHHHHhCCcccCCCC------------cceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccC
Confidence            567789999999999999            66999999999999999999876421111  1122345689999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       184 ~~~~~~Dv~sl  194 (266)
T cd05033         184 KFTSASDVWSF  194 (266)
T ss_pred             CCccccchHHH
Confidence            89999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.16  E-value=8.4e-12  Score=91.66  Aligned_cols=78  Identities=24%  Similarity=0.404  Sum_probs=62.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...++.++|..+++|++++            ++|++++. ++.++++|||+++.+...........+++.|+|||++.+ 
T Consensus       119 i~~~L~~LH~~~i~H~dl~------------~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  186 (295)
T cd07837         119 LLKGVAHCHKHGVMHRDLK------------PQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGS  186 (295)
T ss_pred             HHHHHHHHHHCCeeecCCC------------hHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCC
Confidence            4678889999999999999            66999998 889999999999765433222233457888999998865 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       187 ~~~~~~~Di~sl  198 (295)
T cd07837         187 THYSTPVDIWSV  198 (295)
T ss_pred             CCCCchHHHHHH
Confidence            457899999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.16  E-value=9.9e-12  Score=89.98  Aligned_cols=78  Identities=26%  Similarity=0.326  Sum_probs=62.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~~  166 (177)
                      ..+++.++|..+++|++++            ++|++++.++.++++|||.++.+...... .....++..|+|||+....
T Consensus       111 l~~aL~~lH~~~i~H~dl~------------p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  178 (262)
T cd05071         111 IASGMAYVERMNYVHRDLR------------AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  178 (262)
T ss_pred             HHHHHHHHHHCCccccccC------------cccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccC
Confidence            3677889999999999999            66999999999999999999765432211 1223466789999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       179 ~~~~~~Dvwsl  189 (262)
T cd05071         179 RFTIKSDVWSF  189 (262)
T ss_pred             CCCchhhHHHH
Confidence            89999999985

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.16  E-value=9.9e-12  Score=89.55  Aligned_cols=78  Identities=27%  Similarity=0.438  Sum_probs=62.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||.++........ .....++..|+|||++.+.
T Consensus       109 i~~~l~~lH~~~i~H~dl~------------p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (256)
T cd05114         109 VCEGMEYLERNSFIHRDLA------------ARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFS  176 (256)
T ss_pred             HHHHHHHHHHCCccccccC------------cceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccC
Confidence            4677889999999999999            66999999999999999998765332111 1122355689999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       177 ~~~~~~Di~s~  187 (256)
T cd05114         177 KYSSKSDVWSF  187 (256)
T ss_pred             ccchhhhhHHH
Confidence            89999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0201|consensus

Probab=99.16  E-value=1.4e-11  Score=92.23  Aligned_cols=65  Identities=46%  Similarity=0.957  Sum_probs=61.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.|||.+..+..+++.|.+..||.++  ..+|+.+++||..||.+||..||+|.++|+|.|+..
T Consensus       204 la~GePP~s~~hPmrvlflIpk~~PP~L~--~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  204 LAKGEPPHSKLHPMRVLFLIPKSAPPRLD--GDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             HhcCCCCCcccCcceEEEeccCCCCCccc--cccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence            68999999999999999999999999986  489999999999999999999999999999999976

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.16  E-value=1.1e-11  Score=89.59  Aligned_cols=78  Identities=26%  Similarity=0.329  Sum_probs=62.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++..+..... ......++..|+|||.+...
T Consensus       111 l~~al~~lH~~~i~H~di~------------p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (260)
T cd05070         111 VAAGMAYIERMNYIHRDLR------------SANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  178 (260)
T ss_pred             HHHHHHHHHHCCcccCCCc------------cceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcC
Confidence            4677889999999999999            5699999999999999999976543211 11223456689999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       179 ~~~~~~Di~sl  189 (260)
T cd05070         179 RFTIKSDVWSF  189 (260)
T ss_pred             CCcchhhhHHH
Confidence            89999999995

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0575|consensus

Probab=99.16  E-value=3.6e-11  Score=93.11  Aligned_cols=62  Identities=26%  Similarity=0.480  Sum_probs=57.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|+|||+..+.++.+.+|..+   .+..|..+|.+++|||.++|..||.+||++.++|.|+||
T Consensus       211 LL~G~PPFetk~vkety~~Ik~~---~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  211 LLVGRPPFETKTVKETYNKIKLN---EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             hhhCCCCcccchHHHHHHHHHhc---CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence            68999999999999999999888   444477899999999999999999999999999999999

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.15  E-value=9.9e-12  Score=90.64  Aligned_cols=78  Identities=58%  Similarity=0.920  Sum_probs=64.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++..............++..|+|||++.+..
T Consensus       110 l~~~l~~lh~~~ivH~dl~------------p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  177 (277)
T cd06640         110 ILKGLDYLHSEKKIHRDIK------------AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA  177 (277)
T ss_pred             HHHHHHHHHhCCccCcCCC------------hhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCC
Confidence            3577889999999999999            6699999999999999999976544322233456888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       178 ~~~~~Dv~sl  187 (277)
T cd06640         178 YDSKADIWSL  187 (277)
T ss_pred             CccHHHHHHH
Confidence            8999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.15  E-value=1.1e-11  Score=89.24  Aligned_cols=79  Identities=34%  Similarity=0.611  Sum_probs=65.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||++.+.
T Consensus       109 ~l~~~l~~lh~~~i~h~~l~------------~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  176 (256)
T cd08218         109 QICLALKHVHDRKILHRDIK------------SQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENR  176 (256)
T ss_pred             HHHHHHHHHHhCCEecCCCC------------HHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCC
Confidence            34677889999999999999            669999999999999999997654432222345688899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       177 ~~~~~~Dv~sl  187 (256)
T cd08218         177 PYNNKSDIWAL  187 (256)
T ss_pred             CCCCccchhHH
Confidence            88899999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.15  E-value=1.2e-11  Score=88.84  Aligned_cols=78  Identities=24%  Similarity=0.376  Sum_probs=60.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--CccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~~  165 (177)
                      ..+++.++|..+++|++++            +.|++++.++.++++|||+++........  .....++..|+|||.+.+
T Consensus       103 i~~~L~~lH~~~i~H~dl~------------p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  170 (252)
T cd05084         103 AAAGMEYLESKHCIHRDLA------------ARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNY  170 (252)
T ss_pred             HHHHHHHHHhCCccccccc------------hheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcC
Confidence            3577889999999999999            66999999999999999998764432111  111123456999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       171 ~~~~~~~Dv~sl  182 (252)
T cd05084         171 GRYSSESDVWSF  182 (252)
T ss_pred             CCCChHHHHHHH
Confidence            889999999985

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=1.1e-11  Score=89.66  Aligned_cols=79  Identities=35%  Similarity=0.651  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---CCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++......   .......|+..|+|||.+
T Consensus       114 ~i~~al~~LH~~~i~H~dl~------------p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (264)
T cd06653         114 QILQGVSYLHSNMIVHRDIK------------GANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVI  181 (264)
T ss_pred             HHHHHHHHHHhCCEecCCCC------------HHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhh
Confidence            34677889999999999999            669999999999999999997653211   111235688899999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|+|||
T Consensus       182 ~~~~~~~~~Di~sl  195 (264)
T cd06653         182 SGEGYGRKADVWSV  195 (264)
T ss_pred             cCCCCCccccHHHH
Confidence            88888999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=1e-11  Score=90.55  Aligned_cols=79  Identities=49%  Similarity=0.825  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||++..............|+..|++||.+.  
T Consensus       111 ql~~~l~~lh~~~i~h~dl~------------p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  178 (280)
T cd06611         111 QMLEALNFLHSHKVIHRDLK------------AGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACE  178 (280)
T ss_pred             HHHHHHHHHHHCCcccCCCC------------hhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhc
Confidence            34677889999999999999            6699999999999999999876544333334457899999999975  


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         ...++.++|+|||
T Consensus       179 ~~~~~~~~~~sDi~sl  194 (280)
T cd06611         179 TFKDNPYDYKADIWSL  194 (280)
T ss_pred             ccCCCCCCccccHHHH
Confidence               3457789999985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.15  E-value=1.2e-11  Score=89.80  Aligned_cols=78  Identities=18%  Similarity=0.322  Sum_probs=60.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++......  .......+|+..|+|||++..
T Consensus       108 i~~al~~lH~~~i~H~dik------------p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (268)
T cd05086         108 IAAGVTHMHKHNFLHSDLA------------LRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGE  175 (268)
T ss_pred             HHHHHHHHHHCCeeccCCc------------cceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhccc
Confidence            4577889999999999999            66999999999999999998643221  112234568889999998853


Q ss_pred             -------CCCCccceEecC
Q psy3254         166 -------IGYDCVADMWSL  177 (177)
Q Consensus       166 -------~~~~~~~Diws~  177 (177)
                             ..++.++|||||
T Consensus       176 ~~~~~~~~~~~~~~Diwsl  194 (268)
T cd05086         176 FHGGLITAEQTKPSNVWAL  194 (268)
T ss_pred             ccCccccCCCCCcchhHHH
Confidence                   235778999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.15  E-value=1.2e-11  Score=91.37  Aligned_cols=79  Identities=27%  Similarity=0.440  Sum_probs=62.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe~  162 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||++..+.....    ......++..|+|||.
T Consensus       127 qi~~al~~lH~~~i~H~dl~------------p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  194 (310)
T cd07865         127 MLLNGLYYIHRNKILHRDMK------------AANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPEL  194 (310)
T ss_pred             HHHHHHHHHHHCCeeccCCC------------HHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHH
Confidence            45778889999999999999            6699999999999999999976533211    1223467889999998


Q ss_pred             ccCC-CCCccceEecC
Q psy3254         163 IQEI-GYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~-~~~~~~Diws~  177 (177)
                      +.+. .++.++|||||
T Consensus       195 ~~~~~~~~~~~Di~sl  210 (310)
T cd07865         195 LLGERDYGPPIDMWGA  210 (310)
T ss_pred             hcCCcccCchhhhHHH
Confidence            8764 47889999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.15  E-value=7.8e-12  Score=90.71  Aligned_cols=78  Identities=23%  Similarity=0.309  Sum_probs=59.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++......  .......++..|+|||++..
T Consensus       109 i~~~l~~lH~~~ivH~dlk------------p~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05042         109 VASGLLWLHQADFIHSDLA------------LRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEI  176 (269)
T ss_pred             HHHHHHHHHhcCEeccccc------------HhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhh
Confidence            4677889999999999999            669999999999999999986532211  11223346678999998742


Q ss_pred             -------CCCCccceEecC
Q psy3254         166 -------IGYDCVADMWSL  177 (177)
Q Consensus       166 -------~~~~~~~Diws~  177 (177)
                             ..++.++|||||
T Consensus       177 ~~~~~~~~~~~~~~Diwsl  195 (269)
T cd05042         177 RGQDLLPKDQTKKSNIWSL  195 (269)
T ss_pred             ccccccccccchhhHHHHH
Confidence                   356789999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.15  E-value=7e-12  Score=92.92  Aligned_cols=79  Identities=24%  Similarity=0.409  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC----CCCeEEeeeecccccccccC---CCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT----EGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~----~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~a  159 (177)
                      +...++.++|..+++|++++            ++|++++.    ++.++++|||+++.......   ......++..|+|
T Consensus       116 qi~~~l~~lH~~~i~h~dlk------------p~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  183 (316)
T cd07842         116 QILNGVHYLHSNWVLHRDLK------------PANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRA  183 (316)
T ss_pred             HHHHHHHHHHhCCEeeCCCC------------HHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccC
Confidence            44678889999999999999            66999998    89999999999986543221   1233567889999


Q ss_pred             cccccC-CCCCccceEecC
Q psy3254         160 PEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~-~~~~~~~Diws~  177 (177)
                      ||++.+ ..++.++|||||
T Consensus       184 PE~~~~~~~~~~~~Dv~sl  202 (316)
T cd07842         184 PELLLGARHYTKAIDIWAI  202 (316)
T ss_pred             HHHHhCCCCCCcHHHHHHH
Confidence            998876 458899999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG1151|consensus

Probab=99.15  E-value=1.8e-11  Score=92.39  Aligned_cols=79  Identities=27%  Similarity=0.355  Sum_probs=58.5

Q ss_pred             chHHHHhhhchh--hHHHHHhhhchHHHHHHHHhhcceEeC---CCCCeEEeeeecccccccccC-------CCcccccc
Q psy3254          87 CDFEFLKFLSYD--DLQHRMANLDCEMEREIEQLRRNILLN---TEGHAKLADFGVAGQLTDTMA-------KRNTVIGT  154 (177)
Q Consensus        87 ~~~~~l~~l~~~--~~~~~~~~~~~~~~~~i~~l~~nil~~---~~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~  154 (177)
                      .+..++.|+...  -++|-|++            |.||++.   ..|.+|++|||+++.+.....       ......||
T Consensus       576 QiVnAL~YLNEikpPIIHYDLK------------PgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGT  643 (775)
T KOG1151|consen  576 QIVNALKYLNEIKPPIIHYDLK------------PGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGT  643 (775)
T ss_pred             HHHHHHHHHhccCCCeeeeccC------------CccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCce
Confidence            345566676544  37888888            5599984   356899999999998864321       23456799


Q ss_pred             ccccccccccCC----CCCccceEecC
Q psy3254         155 PFWMAPEVIQEI----GYDCVADMWSL  177 (177)
Q Consensus       155 ~~y~aPe~~~~~----~~~~~~Diws~  177 (177)
                      .||++||.+.-+    ..+.++||||.
T Consensus       644 YWYLPPEcFvVgkePPKIsnKVDVWSv  670 (775)
T KOG1151|consen  644 YWYLPPECFVVGKEPPKISNKVDVWSV  670 (775)
T ss_pred             eeecCcceeecCCCCCccccceeeEee
Confidence            999999998643    47889999984

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.15  E-value=1.2e-11  Score=84.20  Aligned_cols=52  Identities=42%  Similarity=0.526  Sum_probs=44.4

Q ss_pred             hcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCCCccceEecC
Q psy3254         119 RRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       119 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ++|++++.++.+++  ||+++.....     ...||+.|||||++.+..|+.++|||||
T Consensus        39 p~Nil~~~~~~~~~--fG~~~~~~~~-----~~~g~~~y~aPE~~~~~~~~~~~DiwSl   90 (176)
T smart00750       39 SGNILLTWDGLLKL--DGSVAFKTPE-----QSRVDPYFMAPEVIQGQSYTEKADIYSL   90 (176)
T ss_pred             cccEeEcCccceee--ccceEeeccc-----cCCCcccccChHHhcCCCCcchhhHHHH
Confidence            77999999999999  9998765432     2268899999999999999999999995

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.14  E-value=1.3e-11  Score=90.12  Aligned_cols=79  Identities=27%  Similarity=0.453  Sum_probs=63.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||+++.............++..|+|||++.+.
T Consensus       107 ~i~~~L~~lH~~~~~H~dl~------------p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  174 (283)
T cd07835         107 QLLQGIAYCHSHRVLHRDLK------------PQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGS  174 (283)
T ss_pred             HHHHHHHHHHHCCeeCCCCC------------HHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecC
Confidence            34678889999999999999            669999999999999999997654332222334578899999988764


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++|+|||
T Consensus       175 ~~~~~~~Di~sl  186 (283)
T cd07835         175 RQYSTPVDIWSI  186 (283)
T ss_pred             cccCcHHHHHHH
Confidence             57889999995

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.14  E-value=1.4e-11  Score=89.05  Aligned_cols=78  Identities=26%  Similarity=0.413  Sum_probs=61.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++........ .....++..|+|||++.+.
T Consensus       112 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (261)
T cd05068         112 VASGMAYLEAQNYIHRDLA------------ARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYN  179 (261)
T ss_pred             HHHHHHHHHhCCeeeccCC------------cceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccC
Confidence            3577789999999999999            66999999999999999999876432111 1111234579999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       180 ~~~~~~Di~sl  190 (261)
T cd05068         180 RFSIKSDVWSF  190 (261)
T ss_pred             CCCchhhHHHH
Confidence            89999999985

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.14  E-value=1e-11  Score=90.66  Aligned_cols=79  Identities=20%  Similarity=0.262  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||+++.+.....  ......++..|+|||++.
T Consensus       125 ~i~~~l~~LH~~~i~H~di~------------p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~  192 (280)
T cd05043         125 QIACGMSYLHKRGVIHKDIA------------ARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLV  192 (280)
T ss_pred             HHHHHHHHHHHCCEeecccC------------HhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHh
Confidence            34678889999999999999            6699999999999999999986533211  112234567899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       193 ~~~~~~~~Di~sl  205 (280)
T cd05043         193 NKEYSSASDVWSF  205 (280)
T ss_pred             cCCCCchhhHHHh
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.14  E-value=1.3e-11  Score=92.82  Aligned_cols=76  Identities=28%  Similarity=0.451  Sum_probs=62.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.....   .....|+..|+|||++.+ 
T Consensus       125 qi~~aL~~LH~~~i~H~dlk------------p~NIll~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~  189 (342)
T cd07879         125 QMLCGLKYIHSAGIIHRDLK------------PGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILNW  189 (342)
T ss_pred             HHHHHHHHHHHCCcccCCCC------------HHHEEECCCCCEEEeeCCCCcCCCCC---CCCceeeecccChhhhcCc
Confidence            34678889999999999999            66999999999999999998764321   223567889999999876 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       190 ~~~~~~~Dv~sl  201 (342)
T cd07879         190 MHYNQTVDIWSV  201 (342)
T ss_pred             cccCchHHHHHH
Confidence            468889999985

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG4257|consensus

Probab=99.14  E-value=1.4e-11  Score=96.26  Aligned_cols=79  Identities=30%  Similarity=0.430  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcc-ccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNT-VIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~g~~~y~aPe~~~~  165 (177)
                      +...++.|++...++|||+.            .+||++.....+|++|||++|.+.+....... ..-...|||||.+..
T Consensus       499 Qi~talaYLeSkrfVHRDIA------------aRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf  566 (974)
T KOG4257|consen  499 QICTALAYLESKRFVHRDIA------------ARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF  566 (974)
T ss_pred             HHHHHHHHHHhhchhhhhhh------------hhheeecCcceeeecccchhhhccccchhhccccccceeecCccccch
Confidence            44678889999999999998            67999999999999999999988765322221 223568999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||=|
T Consensus       567 RrFTtASDVWMF  578 (974)
T KOG4257|consen  567 RRFTTASDVWMF  578 (974)
T ss_pred             hcccchhhHHHH
Confidence            999999999943

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=1.6e-11  Score=88.63  Aligned_cols=75  Identities=33%  Similarity=0.541  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            +.||+++.++.++++|||+++....    .....|+..|++||.+.+.
T Consensus       105 qi~~aL~~lH~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~~~y~~pe~~~~~  168 (260)
T cd05611         105 EVVLGVEDLHQRGIIHRDIK------------PENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGTPDYLAPETILGV  168 (260)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHeEECCCCcEEEeecccceeccc----cccCCCCcCccChhhhcCC
Confidence            45678889999999999999            6699999999999999999875432    2345688899999999887


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       169 ~~~~~~Dv~sl  179 (260)
T cd05611         169 GDDKMSDWWSL  179 (260)
T ss_pred             CCcchhhhHHH
Confidence            78999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.14  E-value=1.3e-11  Score=90.23  Aligned_cols=78  Identities=33%  Similarity=0.506  Sum_probs=62.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~-  166 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.............++..|+|||++.+. 
T Consensus       109 i~~~l~~lh~~~i~H~~l~------------p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  176 (284)
T cd07860         109 LLQGLAFCHSHRVLHRDLK------------PQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK  176 (284)
T ss_pred             HHHHHHHHHHCCeecCCCC------------HHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCC
Confidence            4678889999999999999            669999999999999999987654332233334578899999988764 


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       177 ~~~~~~Dv~sl  187 (284)
T cd07860         177 YYSTAVDIWSL  187 (284)
T ss_pred             CCCcHHHHHHH
Confidence            46888999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0610|consensus

Probab=99.14  E-value=2.1e-11  Score=90.73  Aligned_cols=77  Identities=30%  Similarity=0.503  Sum_probs=62.4

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccc-------------------------
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTD-------------------------  143 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~-------------------------  143 (177)
                      .-+++|||..+++.||+|            |+||++..+|++.++||-|+.....                         
T Consensus       189 l~ALEYLHmlGivYRDLK------------PENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s  256 (459)
T KOG0610|consen  189 LLALEYLHMLGIVYRDLK------------PENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPS  256 (459)
T ss_pred             HHHHHHHHhhceeeccCC------------cceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccccccccc
Confidence            456789999999999999            7799999999999999988643200                         


Q ss_pred             --------c-c----------------------CCCccccccccccccccccCCCCCccceEecC
Q psy3254         144 --------T-M----------------------AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       144 --------~-~----------------------~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                              . .                      .....++||-.|+|||++.+.+.+.++|+|+|
T Consensus       257 ~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtf  321 (459)
T KOG0610|consen  257 CFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTF  321 (459)
T ss_pred             ccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHH
Confidence                    0 0                      01123679999999999999999999999986

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.14  E-value=1.2e-11  Score=94.82  Aligned_cols=79  Identities=28%  Similarity=0.450  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.......  ......++..|+|||.+.
T Consensus       247 qi~~aL~~LH~~~ivHrdlk------------p~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  314 (401)
T cd05107         247 QVANGMEFLASKNCVHRDLA------------ARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF  314 (401)
T ss_pred             HHHHHHHHHhcCCcCcccCC------------cceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc
Confidence            34678889999999999999            6699999999999999999986532211  122345778899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       315 ~~~~~~~~Dvwsl  327 (401)
T cd05107         315 NNLYTTLSDVWSF  327 (401)
T ss_pred             CCCCCcHhHHHHH
Confidence            8889999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.14  E-value=1.8e-11  Score=87.89  Aligned_cols=77  Identities=23%  Similarity=0.361  Sum_probs=60.8

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--CccccccccccccccccCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~~~  166 (177)
                      ..++.++|..+++|++++            ++|++++.++.++++|||+++........  .....++..|+|||.+.++
T Consensus       103 ~~~l~~lH~~~i~h~di~------------p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  170 (251)
T cd05041         103 AAGMEYLESKNCIHRDLA------------ARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYG  170 (251)
T ss_pred             HHHHHHHHhCCEehhhcC------------cceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccC
Confidence            567889999999999999            66999999999999999998765422111  1122335679999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       171 ~~~~~~Di~sl  181 (251)
T cd05041         171 RYTSESDVWSY  181 (251)
T ss_pred             CCCcchhHHHH
Confidence            89999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.14  E-value=1.5e-11  Score=89.65  Aligned_cols=78  Identities=32%  Similarity=0.429  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            +.||+++.++.++++|||++...... .......++..|+|||++.++
T Consensus       103 ql~~~l~~lH~~~i~H~di~------------p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~  169 (277)
T cd05577         103 QIICGLEHLHQRRIVYRDLK------------PENVLLDDHGNVRISDLGLAVELKGG-KKIKGRAGTPGYMAPEVLQGE  169 (277)
T ss_pred             HHHHHHHHHHhCCcccCCCC------------HHHEEECCCCCEEEccCcchhhhccC-CccccccCCCCcCCHHHhcCC
Confidence            34677889999999999999            66999999999999999998765432 222335678899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+||+
T Consensus       170 ~~~~~~Di~sl  180 (277)
T cd05577         170 VYDFSVDWFAL  180 (277)
T ss_pred             CCCchhhhHHH
Confidence            89999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.14  E-value=1.5e-11  Score=92.24  Aligned_cols=78  Identities=33%  Similarity=0.550  Sum_probs=63.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-----CCCcccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-----AKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~g~~~y~aPe~  162 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.+....     .......|+..|+|||+
T Consensus       116 i~~~L~~LH~~~i~H~dl~------------p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  183 (337)
T cd07852         116 LLKALKYIHSGNVIHRDLK------------PSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEI  183 (337)
T ss_pred             HHHHHHHHHHCCeecCCCC------------HHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCcee
Confidence            3677889999999999999            669999999999999999998654321     12233568999999998


Q ss_pred             ccC-CCCCccceEecC
Q psy3254         163 IQE-IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~-~~~~~~~Diws~  177 (177)
                      +.+ ..++.++|+|||
T Consensus       184 ~~~~~~~~~~sDi~sl  199 (337)
T cd07852         184 LLGSTRYTKGVDMWSV  199 (337)
T ss_pred             eeccccccccchHHHH
Confidence            865 457889999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.14  E-value=1.5e-11  Score=88.79  Aligned_cols=79  Identities=38%  Similarity=0.639  Sum_probs=66.3

Q ss_pred             chHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++.++|. .+++|++++            ++|++++.++.++++|||++..............++..|+|||.+..
T Consensus       107 ~l~~~l~~lh~~~~~~H~~l~------------~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  174 (264)
T cd06623         107 QILKGLDYLHTKRHIIHRDIK------------PSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQG  174 (264)
T ss_pred             HHHHHHHHHhccCCCccCCCC------------HHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCC
Confidence            34678889999 999999999            66999999999999999999876544333334568889999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       175 ~~~~~~~Dv~sl  186 (264)
T cd06623         175 ESYSYAADIWSL  186 (264)
T ss_pred             CCCCchhhHHHH
Confidence            888999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.13  E-value=1.2e-11  Score=89.87  Aligned_cols=74  Identities=24%  Similarity=0.375  Sum_probs=62.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++|++++.++ .++++|||+++.....    ....|+..|+|||++.+.
T Consensus       118 i~~~l~~lH~~~i~H~dl~------------p~nil~~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~  181 (267)
T PHA03390        118 LVEALNDLHKHNIIHNDIK------------LENVLYDRAKDRIYLCDYGLCKIIGTP----SCYDGTLDYFSPEKIKGH  181 (267)
T ss_pred             HHHHHHHHHhCCeeeCCCC------------HHHEEEeCCCCeEEEecCccceecCCC----ccCCCCCcccChhhhcCC
Confidence            3677889999999999999            6699999888 9999999998765432    234688899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+||+
T Consensus       182 ~~~~~~Dvwsl  192 (267)
T PHA03390        182 NYDVSFDWWAV  192 (267)
T ss_pred             CCCchhhHHHH
Confidence            89999999985

>KOG0670|consensus

Probab=99.13  E-value=7.8e-12  Score=95.67  Aligned_cols=126  Identities=25%  Similarity=0.290  Sum_probs=87.9

Q ss_pred             HHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCCCCCCCC-----------------CCCCCCCcchHHHHhhhchhhH
Q psy3254          38 FIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPP-----------------GAPSGGGFCDFEFLKFLSYDDL  100 (177)
Q Consensus        38 ~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~l~~~~~  100 (177)
                      -..+++++-.-||..+..+-.++.|-+.....+...+...+                 ..++.-+.+.|-+++.|...++
T Consensus       478 EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~v  557 (752)
T KOG0670|consen  478 ELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGV  557 (752)
T ss_pred             HHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCe
Confidence            35677888888999988888887764443322222211111                 1111222344677788889999


Q ss_pred             HHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccCCCccccccccccccccccCCCCCccceEecC
Q psy3254         101 QHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       101 ~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      +|.+++++            |||++... .+||||||.|......  ..+.+..+..|.|||++.+.+|+...|+||.
T Consensus       558 lHaDIKPD------------NiLVNE~k~iLKLCDfGSA~~~~en--eitPYLVSRFYRaPEIiLG~~yd~~iD~WSv  621 (752)
T KOG0670|consen  558 LHADIKPD------------NILVNESKNILKLCDFGSASFASEN--EITPYLVSRFYRAPEIILGLPYDYPIDTWSV  621 (752)
T ss_pred             eecccCcc------------ceEeccCcceeeeccCccccccccc--cccHHHHHHhccCcceeecCcccCCccceee
Confidence            99999955            99998655 5899999998765443  2234556788999999999999999999984

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.13  E-value=1.8e-11  Score=91.74  Aligned_cols=79  Identities=27%  Similarity=0.476  Sum_probs=63.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.......    .....+|+..|+|||.
T Consensus       115 qi~~aL~~LH~~~ivH~dlk------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  182 (334)
T cd07855         115 QLLRGLKYIHSANVIHRDLK------------PSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPEL  182 (334)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHH
Confidence            34678889999999999999            6699999999999999999976543211    1123578899999999


Q ss_pred             ccC-CCCCccceEecC
Q psy3254         163 IQE-IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~-~~~~~~~Diws~  177 (177)
                      +.. ..++.++|||||
T Consensus       183 ~~~~~~~~~~~Di~sl  198 (334)
T cd07855         183 LLSLPEYTTAIDMWSV  198 (334)
T ss_pred             hcCCcccccccchHHH
Confidence            865 458899999985

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.13  E-value=2.4e-11  Score=88.79  Aligned_cols=78  Identities=33%  Similarity=0.541  Sum_probs=64.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||++..+.... ......++..|+|||++.+.
T Consensus       115 ~i~~al~~LH~~~i~h~~l~------------~~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~  181 (287)
T cd07838         115 QLLRGVDFLHSHRIVHRDLK------------PQNILVTSDGQVKIADFGLARIYSFEM-ALTSVVVTLWYRAPEVLLQS  181 (287)
T ss_pred             HHHHHHHHHHHCCeeeccCC------------hhhEEEccCCCEEEeccCcceeccCCc-ccccccccccccChHHhccC
Confidence            34677889999999999999            669999999999999999997664332 22234578899999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       182 ~~~~~~Di~s~  192 (287)
T cd07838         182 SYATPVDMWSV  192 (287)
T ss_pred             CCCCcchhhhH
Confidence            89999999995

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.13  E-value=9.1e-12  Score=90.36  Aligned_cols=78  Identities=22%  Similarity=0.317  Sum_probs=61.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||.+........ ......++..|+|||++.+.
T Consensus       116 i~~al~~lH~~~iiH~dik------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (266)
T cd05064         116 LASGMKYLSEMGYVHKGLA------------AHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYH  183 (266)
T ss_pred             HHHHHHHHHHCCEeecccc------------HhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhC
Confidence            3577889999999999999            6699999999999999998764322111 11123356789999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       184 ~~~~~~Di~sl  194 (266)
T cd05064         184 HFSSASDVWSF  194 (266)
T ss_pred             CccchhHHHHH
Confidence            99999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.13  E-value=1.8e-11  Score=88.79  Aligned_cols=79  Identities=41%  Similarity=0.615  Sum_probs=61.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            +.||+++. ++.++++|||++..............|+..|+|||++..
T Consensus       116 qi~~al~~lH~~~i~h~dl~------------p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  183 (268)
T cd06624         116 QILEGLKYLHDNQIVHRDIK------------GDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDK  183 (268)
T ss_pred             HHHHHHHHHHHCCEeecCCC------------HHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhcc
Confidence            34677889999999999999            66999976 678999999998765432222333468889999999865


Q ss_pred             C--CCCccceEecC
Q psy3254         166 I--GYDCVADMWSL  177 (177)
Q Consensus       166 ~--~~~~~~Diws~  177 (177)
                      .  .++.++|+|||
T Consensus       184 ~~~~~~~~~Dv~sl  197 (268)
T cd06624         184 GPRGYGAPADIWSL  197 (268)
T ss_pred             ccccCCchhhhHHH
Confidence            4  37889999985

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.13  E-value=2.9e-11  Score=88.29  Aligned_cols=78  Identities=37%  Similarity=0.669  Sum_probs=61.9

Q ss_pred             chHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|.. +++|++++            ++|++++.++.++++|||+++.+.... ......|+..|+|||++.+
T Consensus       111 qi~~~l~~lH~~~~i~h~dlk------------p~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~  177 (283)
T cd06617         111 SIVKALEYLHSKLSVIHRDVK------------PSNVLINRNGQVKLCDFGISGYLVDSV-AKTIDAGCKPYMAPERINP  177 (283)
T ss_pred             HHHHHHHHHhhcCCeecCCCC------------HHHEEECCCCCEEEeeccccccccccc-ccccccCCccccChhhcCC
Confidence            346778899987 89999999            669999999999999999998654321 1223468889999998864


Q ss_pred             ----CCCCccceEecC
Q psy3254         166 ----IGYDCVADMWSL  177 (177)
Q Consensus       166 ----~~~~~~~Diws~  177 (177)
                          ..++.++|+|||
T Consensus       178 ~~~~~~~~~~~Di~sl  193 (283)
T cd06617         178 ELNQKGYDVKSDVWSL  193 (283)
T ss_pred             cccccccCccccchhh
Confidence                457889999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.13  E-value=1.5e-11  Score=90.04  Aligned_cols=79  Identities=48%  Similarity=0.814  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||++..............++..|++||++.+.
T Consensus       124 ~i~~~L~~lH~~gi~H~dl~------------p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  191 (286)
T cd06614         124 EVLQGLEYLHSQNVIHRDIK------------SDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRK  191 (286)
T ss_pred             HHHHHHHHHHhCCeeeCCCC------------hhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCC
Confidence            34677889999999999999            669999999999999999887654332233345678899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       192 ~~~~~~Dv~sl  202 (286)
T cd06614         192 DYGPKVDIWSL  202 (286)
T ss_pred             CCCCccccHHH
Confidence            89999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=1.7e-11  Score=89.21  Aligned_cols=78  Identities=47%  Similarity=0.784  Sum_probs=64.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-C
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-I  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~  166 (177)
                      ..+++.++|..+++|++++            +.|++++.++.++++|||++..+...........|+..|+|||.+.. .
T Consensus       110 i~~~l~~lh~~~i~H~dl~------------p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (277)
T cd06917         110 VLVALKYIHKVGVIHRDIK------------AANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK  177 (277)
T ss_pred             HHHHHHHHHhCCcccCCcC------------HHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCC
Confidence            4677889999999999999            66999999999999999999876544333344578999999998865 4


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       178 ~~~~~~Dv~sl  188 (277)
T cd06917         178 YYDTKADIWSL  188 (277)
T ss_pred             ccccchhHHHH
Confidence            57889999985

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.12  E-value=1.5e-11  Score=92.56  Aligned_cols=76  Identities=28%  Similarity=0.517  Sum_probs=62.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.....   .....|+..|+|||++.+ 
T Consensus       128 qi~~aL~~LH~~~ivH~dlk------------p~NIll~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~  192 (345)
T cd07877         128 QILRGLKYIHSADIIHRDLK------------PSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW  192 (345)
T ss_pred             HHHHHHHHHHHCCeeecCCC------------hHHEEEcCCCCEEEeccccccccccc---ccccccCCCccCHHHHhCc
Confidence            34678889999999999999            66999999999999999998764322   234568889999999876 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       193 ~~~~~~~Dvwsl  204 (345)
T cd07877         193 MHYNQTVDIWSV  204 (345)
T ss_pred             cCCCchhhHHHH
Confidence            568889999985

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=1.6e-11  Score=91.20  Aligned_cols=79  Identities=32%  Similarity=0.454  Sum_probs=63.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---------------------  145 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------  145 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||++.......                     
T Consensus       111 qi~~~l~~lH~~~i~H~dlk------------p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (316)
T cd05574         111 EVLLALEYLHLLGIVYRDLK------------PENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPS  178 (316)
T ss_pred             HHHHHHHHHHHCCeeccCCC------------hHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccch
Confidence            34678889999999999999            669999999999999999986542210                     


Q ss_pred             --------CCCccccccccccccccccCCCCCccceEecC
Q psy3254         146 --------AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       146 --------~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                              ......+|+..|+|||++.+..++.++|||||
T Consensus       179 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~sl  218 (316)
T cd05574         179 ETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTL  218 (316)
T ss_pred             hhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHH
Confidence                    01123468889999999998889999999985

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.12  E-value=2.1e-11  Score=88.52  Aligned_cols=79  Identities=23%  Similarity=0.320  Sum_probs=60.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||+++.......  ......|+..|+|||++.
T Consensus       108 qi~~al~~lH~~~i~H~dlk------------p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05087         108 EIALGLLHLHKNNFIHSDLA------------LRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVD  175 (269)
T ss_pred             HHHHHHHHHHHCCEeccccC------------cceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhc
Confidence            34677889999999999999            6699999999999999999875432211  122345788899999985


Q ss_pred             CC-------CCCccceEecC
Q psy3254         165 EI-------GYDCVADMWSL  177 (177)
Q Consensus       165 ~~-------~~~~~~Diws~  177 (177)
                      ..       .++.++|+|||
T Consensus       176 ~~~~~~~~~~~~~~~Diwsl  195 (269)
T cd05087         176 EVHGNLLVVDQTKESNVWSL  195 (269)
T ss_pred             cccccccccCCCccchhHHH
Confidence            32       35789999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.12  E-value=1.9e-11  Score=87.65  Aligned_cols=77  Identities=26%  Similarity=0.381  Sum_probs=60.8

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..++.++|..+++|++++            ++|++++.++.++++|||++......... .....++..|+|||++....
T Consensus       103 ~~~l~~lH~~~~~H~dl~------------p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  170 (250)
T cd05085         103 AAGMAYLESKNCIHRDLA------------ARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGR  170 (250)
T ss_pred             HHHHHHHHhCCeeecccC------------hheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCC
Confidence            467778999999999999            66999999999999999998754332111 11223456799999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       171 ~~~~~Di~sl  180 (250)
T cd05085         171 YSSESDVWSY  180 (250)
T ss_pred             CCchhHHHHH
Confidence            8999999995

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.12  E-value=2e-11  Score=87.21  Aligned_cols=75  Identities=28%  Similarity=0.316  Sum_probs=62.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..+++.++|..+++|++++            |+|++++.++.++++|||.+......   .....++..|+|||.+....
T Consensus        94 l~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~  158 (237)
T cd05576          94 MVVALDALHREGIVCRDLN------------PNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPEVGGISE  158 (237)
T ss_pred             HHHHHHHHHhCCeeccCCC------------HHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCcccCCCC
Confidence            4678889999999999999            66999999999999999988655432   12234567899999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       159 ~~~~~Dvwsl  168 (237)
T cd05576         159 ETEACDWWSL  168 (237)
T ss_pred             CCchhhHHHH
Confidence            8999999985

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.12  E-value=1.5e-11  Score=88.79  Aligned_cols=79  Identities=25%  Similarity=0.328  Sum_probs=63.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||+++....... ......++..|+|||.+.+
T Consensus       110 ~l~~al~~lH~~~i~H~dl~------------~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~  177 (260)
T cd05069         110 QIADGMAYIERMNYIHRDLR------------AANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY  177 (260)
T ss_pred             HHHHHHHHHHhCCEeecccC------------cceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc
Confidence            34678889999999999999            6699999999999999999976543211 1122345678999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       178 ~~~~~~~Di~sl  189 (260)
T cd05069         178 GRFTIKSDVWSF  189 (260)
T ss_pred             CCcChHHHHHHH
Confidence            889999999985

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.12  E-value=1.6e-11  Score=89.14  Aligned_cols=78  Identities=23%  Similarity=0.342  Sum_probs=62.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.......  ......++..|++||.+..
T Consensus       122 i~~~l~~lH~~~i~H~dik------------p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  189 (273)
T cd05074         122 IASGMEYLSSKNFIHRDLA------------ARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD  189 (273)
T ss_pred             HHHHHHHHHhCCEeecccc------------hhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhc
Confidence            3577889999999999999            6699999999999999999986532211  1223345678999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       190 ~~~~~~sDi~sl  201 (273)
T cd05074         190 NVYTTHSDVWAF  201 (273)
T ss_pred             CccchhhhhHHH
Confidence            889999999996

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.12  E-value=1.4e-11  Score=88.92  Aligned_cols=78  Identities=24%  Similarity=0.408  Sum_probs=62.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++........ .....++..|++||.+.+.
T Consensus       109 i~~~l~~lH~~~i~H~dl~------------p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  176 (256)
T cd05113         109 VCEGMAYLESKQFIHRDLA------------ARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYS  176 (256)
T ss_pred             HHHHHHHHHhCCeeccccC------------cceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcC
Confidence            4677889999999999999            66999999999999999998765432111 1112355679999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       177 ~~~~~~Di~sl  187 (256)
T cd05113         177 KFSSKSDVWAF  187 (256)
T ss_pred             cccchhHHHHH
Confidence            89999999996

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.12  E-value=2.2e-11  Score=87.95  Aligned_cols=78  Identities=45%  Similarity=0.823  Sum_probs=63.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC----Cccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK----RNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..+......    .....|+..|++||++
T Consensus       111 l~~al~~lh~~~i~h~~l~------------p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~  178 (267)
T cd06610         111 VLKGLEYLHSNGQIHRDIK------------AGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM  178 (267)
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHH
Confidence            4677889999999999999            66999999999999999998765443221    2345689999999999


Q ss_pred             cCC-CCCccceEecC
Q psy3254         164 QEI-GYDCVADMWSL  177 (177)
Q Consensus       164 ~~~-~~~~~~Diws~  177 (177)
                      ... .++.++|+|||
T Consensus       179 ~~~~~~~~~~Dv~sl  193 (267)
T cd06610         179 EQVHGYDFKADIWSF  193 (267)
T ss_pred             ccccCcCcccchHhH
Confidence            776 78899999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.11  E-value=1.6e-11  Score=90.36  Aligned_cols=79  Identities=30%  Similarity=0.484  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...+++.++|..+++|++++            ++||+++.++.++++|||+++.............++..|+|||.+.+ 
T Consensus       110 qi~~al~~lH~~~i~H~dl~------------p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  177 (298)
T cd07841         110 MTLRGLEYLHSNWILHRDLK------------PNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA  177 (298)
T ss_pred             HHHHHHHHHHhCCeeecCCC------------hhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCC
Confidence            44788889999999999999            66999999999999999999876543333333457788999998865 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       178 ~~~~~~~Dv~sl  189 (298)
T cd07841         178 RHYGVGVDMWSV  189 (298)
T ss_pred             CCCCcHHHHHHH
Confidence            467889999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.11  E-value=1.9e-11  Score=89.16  Aligned_cols=79  Identities=33%  Similarity=0.517  Sum_probs=64.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||.+..............++..|+|||.+.+.
T Consensus       106 ~i~~~l~~LH~~~i~H~dl~------------p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  173 (283)
T cd05118         106 QLLQGLAFCHSHGILHRDLK------------PENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD  173 (283)
T ss_pred             HHHHHHHHHHHCCeeecCcC------------HHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcC
Confidence            34678889999999999999            669999999999999999997665433223335678899999998775


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++|+||+
T Consensus       174 ~~~~~~~Di~sl  185 (283)
T cd05118         174 KGYSTPVDIWSV  185 (283)
T ss_pred             CCCCchhHHHHH
Confidence             78899999985

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.11  E-value=1.2e-11  Score=89.42  Aligned_cols=77  Identities=43%  Similarity=0.718  Sum_probs=64.0

Q ss_pred             chHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++.++|. .+++|++++            +.|++++.++.++++|||.+........  ....|+..|+|||.+.+
T Consensus       108 ~l~~~l~~lH~~~~i~H~dl~------------~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~y~~PE~~~~  173 (265)
T cd06605         108 AVLKGLTYLHEKHKIIHRDVK------------PSNILVNSRGQIKLCDFGVSGQLVNSLA--KTFVGTSSYMAPERIQG  173 (265)
T ss_pred             HHHHHHHHHcCCCCeecCCCC------------HHHEEECCCCCEEEeecccchhhHHHHh--hcccCChhccCHHHHcC
Confidence            34678889999 999999999            6699999999999999999876543211  12668889999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       174 ~~~~~~~Dv~sl  185 (265)
T cd06605         174 NDYSVKSDIWSL  185 (265)
T ss_pred             CCCCchhhHHHH
Confidence            889999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.11  E-value=2e-11  Score=88.48  Aligned_cols=77  Identities=31%  Similarity=0.412  Sum_probs=61.1

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC-c--cccccccccccccccC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR-N--TVIGTPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~--~~~g~~~y~aPe~~~~  165 (177)
                      ..++.++|..+++|++++            ++|++++.++.++++|||+++.+....... .  ...++..|+|||.+.+
T Consensus       116 ~~~l~~lH~~~i~h~dlk------------p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~  183 (267)
T cd05066         116 ASGMKYLSDMGYVHRDLA------------ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY  183 (267)
T ss_pred             HHHHHHHHHCCEeehhhc------------hhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhcc
Confidence            577789999999999999            669999999999999999998654322111 1  1123457999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       184 ~~~~~~~Dv~sl  195 (267)
T cd05066         184 RKFTSASDVWSY  195 (267)
T ss_pred             CccCchhhhHHH
Confidence            889999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.11  E-value=2.9e-11  Score=88.13  Aligned_cols=78  Identities=29%  Similarity=0.480  Sum_probs=63.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~-  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.............++..|+|||.+... 
T Consensus       107 i~~~l~~LH~~~i~H~~l~------------~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  174 (282)
T cd07829         107 LLRGLAYCHSHRILHRDLK------------PQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSK  174 (282)
T ss_pred             HHHHHHHHHHCCcccCCCC------------hheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCc
Confidence            4678889999999999999            569999999999999999998654432223334567789999998765 


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       175 ~~~~~~Dv~sl  185 (282)
T cd07829         175 HYSTAVDIWSV  185 (282)
T ss_pred             CCCccccHHHH
Confidence            78899999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0198|consensus

Probab=99.11  E-value=1.4e-10  Score=85.37  Aligned_cols=68  Identities=34%  Similarity=0.707  Sum_probs=57.6

Q ss_pred             CccCCCCCCC-CCHHHHHhhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGD-IHPMRAIFMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~-~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |+||.+||.+ ....+.++.|.... .|.+  |..+|.+++||+.+||.+||.+|||+.++|.|||+.....
T Consensus       215 M~Tg~~PW~~~~~~~~~~~~ig~~~~~P~i--p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  215 MLTGKPPWSEFFEEAEALLLIGREDSLPEI--PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             ccCCCCcchhhcchHHHHHHHhccCCCCCC--CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            8999999998 56677777777554 3444  7789999999999999999999999999999999986543

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.11  E-value=1.7e-11  Score=89.89  Aligned_cols=78  Identities=26%  Similarity=0.349  Sum_probs=61.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.+.....  ......++..|+|||++.+
T Consensus       139 i~~aL~~lH~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (288)
T cd05050         139 VAAGMAYLSERKFVHRDLA------------TRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY  206 (288)
T ss_pred             HHHHHHHHHhCCeeccccc------------HhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc
Confidence            3577889999999999999            6699999999999999999875432211  1122334667999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       207 ~~~~~~~Dv~sl  218 (288)
T cd05050         207 NRYTTESDVWAY  218 (288)
T ss_pred             CCCCchhHHHHH
Confidence            889999999995

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.11  E-value=1.8e-11  Score=90.66  Aligned_cols=76  Identities=41%  Similarity=0.693  Sum_probs=62.9

Q ss_pred             hHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ..+++.++|. .+++|++++            +.|++++.++.++++|||+++.+...  .....+|+..|+|||++.+.
T Consensus       108 i~~~l~~lH~~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~aPE~~~~~  173 (308)
T cd06615         108 VLRGLTYLREKHKIMHRDVK------------PSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGT  173 (308)
T ss_pred             HHHHHHHHHhhCCEEECCCC------------hHHEEEecCCcEEEccCCCccccccc--ccccCCCCcCccChhHhcCC
Confidence            4577889997 589999999            66999999999999999998765332  22346789999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       174 ~~~~~~Diwsl  184 (308)
T cd06615         174 HYTVQSDIWSL  184 (308)
T ss_pred             CCCccchHHHH
Confidence            89999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.10  E-value=1.8e-11  Score=101.48  Aligned_cols=78  Identities=29%  Similarity=0.536  Sum_probs=59.7

Q ss_pred             chHHHHhhhchh-------hHHHHHhhhchHHHHHHHHhhcceEeCC-----------------CCCeEEeeeecccccc
Q psy3254          87 CDFEFLKFLSYD-------DLQHRMANLDCEMEREIEQLRRNILLNT-----------------EGHAKLADFGVAGQLT  142 (177)
Q Consensus        87 ~~~~~l~~l~~~-------~~~~~~~~~~~~~~~~i~~l~~nil~~~-----------------~~~~~l~dfg~~~~~~  142 (177)
                      +...++.++|..       .++|++++            |.||++..                 .+.++|+|||+++.+.
T Consensus       126 QIL~ALaYLHs~g~~~~~k~IVHRDLK------------PeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~  193 (1021)
T PTZ00266        126 QLLHALAYCHNLKDGPNGERVLHRDLK------------PQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG  193 (1021)
T ss_pred             HHHHHHHHHHhcccccccCCceeccCc------------HHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence            446788899974       49999999            66999854                 2348999999998654


Q ss_pred             cccCCCccccccccccccccccC--CCCCccceEecC
Q psy3254         143 DTMAKRNTVIGTPFWMAPEVIQE--IGYDCVADMWSL  177 (177)
Q Consensus       143 ~~~~~~~~~~g~~~y~aPe~~~~--~~~~~~~Diws~  177 (177)
                      .. ......+||+.|+|||++.+  ..++.++|||||
T Consensus       194 ~~-s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSL  229 (1021)
T PTZ00266        194 IE-SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWAL  229 (1021)
T ss_pred             cc-ccccccCCCccccCHHHHhccCCCCCchhHHHHH
Confidence            32 12234579999999999864  458899999996

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.10  E-value=2.7e-11  Score=87.26  Aligned_cols=75  Identities=28%  Similarity=0.487  Sum_probs=61.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||.++......   ....++..|+|||.+....
T Consensus       111 i~~~l~~lh~~~i~H~di~------------p~Nili~~~~~~~l~d~g~~~~~~~~~---~~~~~~~~~~ape~~~~~~  175 (256)
T cd05039         111 VCEGMEYLEEKNFVHRDLA------------ARNVLVSEDLVAKVSDFGLAKEASQGQ---DSGKLPVKWTAPEALREKK  175 (256)
T ss_pred             HHHHHHHHHhCCccchhcc------------cceEEEeCCCCEEEccccccccccccc---ccCCCcccccCchhhcCCc
Confidence            4677889999999999999            669999999999999999998663321   1233456799999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       176 ~~~~~Di~sl  185 (256)
T cd05039         176 FSTKSDVWSF  185 (256)
T ss_pred             CCcHHHHHHH
Confidence            8999999985

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.10  E-value=3.2e-11  Score=87.58  Aligned_cols=79  Identities=28%  Similarity=0.398  Sum_probs=62.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||+++........ .....++..|+|||.+..
T Consensus       115 ~l~~~l~~lH~~~~~H~dl~------------p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  182 (270)
T cd05056         115 QLSTALAYLESKRFVHRDIA------------ARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINF  182 (270)
T ss_pred             HHHHHHHHHHhCCeeccccC------------hheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhcc
Confidence            34677889999999999999            66999999999999999999765433111 112234567999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       183 ~~~~~~~Di~sl  194 (270)
T cd05056         183 RRFTSASDVWMF  194 (270)
T ss_pred             CCCCchhhhHHH
Confidence            889999999985

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.10  E-value=2.6e-11  Score=87.88  Aligned_cols=77  Identities=27%  Similarity=0.441  Sum_probs=61.4

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-----CeEEeeeeccccccccc--CCCccccccccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-----HAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPE  161 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-----~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe  161 (177)
                      ..++.++|..+++|++++            ++|++++.++     .++++|||+++......  .......++..|+|||
T Consensus       116 ~~~l~~lH~~~i~H~dl~------------p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  183 (269)
T cd05044         116 AKGCVYLEQMHFIHRDLA------------ARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPE  183 (269)
T ss_pred             HHHHHHHHhCCcccCCCC------------hheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHH
Confidence            566789999999999999            6699998877     89999999997653221  1122335677899999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      ++.+..++.++|||||
T Consensus       184 ~~~~~~~~~~~Dv~sl  199 (269)
T cd05044         184 SLLDGKFTTQSDVWSF  199 (269)
T ss_pred             HHccCCcccchhHHHH
Confidence            9998889999999985

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.10  E-value=2.5e-11  Score=88.54  Aligned_cols=78  Identities=56%  Similarity=0.909  Sum_probs=64.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++..+...........|+..|+|||.+.+..
T Consensus       110 l~~~l~~lh~~~i~h~dl~------------p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  177 (277)
T cd06641         110 ILKGLDYLHSEKKIHRDIK------------AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA  177 (277)
T ss_pred             HHHHHHHHccCCeecCCCC------------HHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCC
Confidence            3567789999999999999            6699999999999999999876544322233456888999999998878


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       178 ~~~~~Dv~sl  187 (277)
T cd06641         178 YDSKADIWSL  187 (277)
T ss_pred             CCchhhHHHH
Confidence            8899999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.10  E-value=4.6e-11  Score=86.32  Aligned_cols=78  Identities=29%  Similarity=0.400  Sum_probs=62.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||.+........ ......++..|+|||++...
T Consensus       111 l~~aL~~lH~~~i~H~dl~------------p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  178 (260)
T cd05073         111 IAEGMAFIEQRNYIHRDLR------------AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG  178 (260)
T ss_pred             HHHHHHHHHhCCccccccC------------cceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccC
Confidence            4677889999999999999            6699999999999999999876543211 11223456779999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       179 ~~~~~~Di~sl  189 (260)
T cd05073         179 SFTIKSDVWSF  189 (260)
T ss_pred             CcCccccchHH
Confidence            89999999995

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0199|consensus

Probab=99.10  E-value=5.3e-11  Score=94.08  Aligned_cols=78  Identities=24%  Similarity=0.404  Sum_probs=63.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC---cccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR---NTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~g~~~y~aPe~~~  164 (177)
                      +..++.|+..+.++|||+.            .+|+++.....+||+||||.|.+.......   ...--...|.|||.+.
T Consensus       221 iA~aM~YLeskrlvHRDLA------------ARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLr  288 (1039)
T KOG0199|consen  221 IAKAMQYLESKRLVHRDLA------------ARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLR  288 (1039)
T ss_pred             HHHHHHHHhhhhhhhhhhh------------hhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhc
Confidence            3577889999999999998            779999999999999999999876542221   1122355799999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...|+.++|||+|
T Consensus       289 h~kFShaSDvWmy  301 (1039)
T KOG0199|consen  289 HRKFSHASDVWMY  301 (1039)
T ss_pred             cccccccchhhhh
Confidence            9999999999986

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.10  E-value=2.6e-11  Score=89.59  Aligned_cols=79  Identities=27%  Similarity=0.499  Sum_probs=62.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-----------CCccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-----------KRNTVIGTP  155 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-----------~~~~~~g~~  155 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||+++.......           ......|+.
T Consensus       123 ~l~~al~~lH~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (311)
T cd07866         123 QLLEGINYLHENHILHRDIK------------AANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTR  190 (311)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceecc
Confidence            34678889999999999999            6699999999999999999976432211           112346788


Q ss_pred             cccccccccC-CCCCccceEecC
Q psy3254         156 FWMAPEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       156 ~y~aPe~~~~-~~~~~~~Diws~  177 (177)
                      .|+|||.+.+ ..++.++|||||
T Consensus       191 ~y~aPE~~~~~~~~~~~~Dv~sl  213 (311)
T cd07866         191 WYRPPELLLGERRYTTAVDIWGI  213 (311)
T ss_pred             CcCChHHhhCCCccCchhHhHHH
Confidence            8999998865 458889999995

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.10  E-value=1.9e-11  Score=89.82  Aligned_cols=79  Identities=24%  Similarity=0.389  Sum_probs=61.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++|++++. ++.++++|||++..............|+..|+|||++.+
T Consensus       110 qi~~aL~~LH~~~i~H~dl~------------p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  177 (294)
T PLN00009        110 QILRGIAYCHSHRVLHRDLK------------PQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLG  177 (294)
T ss_pred             HHHHHHHHHHhCCeeCCCCC------------cceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhC
Confidence            34688889999999999999            66999985 456899999999765433222234567889999999876


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..++.++||||+
T Consensus       178 ~~~~~~~~Dv~sl  190 (294)
T PLN00009        178 SRHYSTPVDIWSV  190 (294)
T ss_pred             CCCCCcHHHHHHH
Confidence             457889999985

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.10  E-value=3.2e-11  Score=88.46  Aligned_cols=79  Identities=29%  Similarity=0.451  Sum_probs=63.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++.++|..+++|++++            ++||+++.++.++++|||+++...... .......|+..|+|||.+..
T Consensus       113 qi~~al~~lH~~~i~H~dl~------------p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (290)
T cd05613         113 EIVLALEHLHKLGIIYRDIK------------LENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRG  180 (290)
T ss_pred             HHHHHHHHHHhCCeeccCCC------------HHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccC
Confidence            35778889999999999999            669999999999999999997654321 12224568899999999875


Q ss_pred             --CCCCccceEecC
Q psy3254         166 --IGYDCVADMWSL  177 (177)
Q Consensus       166 --~~~~~~~Diws~  177 (177)
                        ..++.++|||||
T Consensus       181 ~~~~~~~~~Dv~sl  194 (290)
T cd05613         181 GDGGHDKAVDWWSM  194 (290)
T ss_pred             CCCCCCccccHHHH
Confidence              347788999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.10  E-value=2.5e-11  Score=88.53  Aligned_cols=78  Identities=31%  Similarity=0.379  Sum_probs=61.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC--ccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.+.......  ....++..|+|||.+..
T Consensus       118 i~~~l~~LH~~~i~H~di~------------p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (279)
T cd05057         118 IAKGMSYLEEKRLVHRDLA------------ARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH  185 (279)
T ss_pred             HHHHHHHHHhCCEEecccC------------cceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhc
Confidence            4677889999999999999            669999999999999999998654321111  11223567999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       186 ~~~~~~~Di~sl  197 (279)
T cd05057         186 RIYTHKSDVWSY  197 (279)
T ss_pred             CCcCchhhHHHH
Confidence            889999999996

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.10  E-value=2.3e-11  Score=88.81  Aligned_cols=78  Identities=28%  Similarity=0.465  Sum_probs=63.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-C
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-I  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~  166 (177)
                      ..+++.++|..+++|++++            ++|++++.++.++++|||+++.............++..|++||++.+ .
T Consensus       109 i~~~l~~lH~~~i~h~dl~------------p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  176 (284)
T cd07836         109 LLKGIAFCHENRVLHRDLK------------PQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSR  176 (284)
T ss_pred             HHHHHHHHHHCCeeeCCCC------------HHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCC
Confidence            4678889999999999999            66999999999999999999765433222334567889999999866 4


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       177 ~~~~~~Dv~sl  187 (284)
T cd07836         177 TYSTSIDIWSV  187 (284)
T ss_pred             CCCcHHHHHHH
Confidence            57889999985

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.10  E-value=2.2e-11  Score=87.37  Aligned_cols=79  Identities=37%  Similarity=0.657  Sum_probs=66.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||.+..............|++.|+|||.+.+.
T Consensus       111 ~i~~~l~~lh~~~~~H~dl~------------~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  178 (258)
T cd08215         111 QLCLALKYLHSRKILHRDIK------------PQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNK  178 (258)
T ss_pred             HHHHHHHHHHhCCEecccCC------------hHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccC
Confidence            34678889999999999999            559999999999999999997665443233446788999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+||+
T Consensus       179 ~~~~~~Dv~sl  189 (258)
T cd08215         179 PYNYKSDIWSL  189 (258)
T ss_pred             CCCccccHHHH
Confidence            89999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.10  E-value=1.7e-11  Score=89.40  Aligned_cols=78  Identities=31%  Similarity=0.456  Sum_probs=60.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC---CeEEeeeecccccccccC--CCcccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG---HAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~---~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~  162 (177)
                      ...++.++|..+++|++++            ++||+++.++   .++++|||+++.+.....  ......++..|+|||+
T Consensus       125 i~~~l~~LH~~~ivH~dlk------------p~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  192 (277)
T cd05036         125 VAKGCKYLEENHFIHRDIA------------ARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEA  192 (277)
T ss_pred             HHHHHHHHHHCCEeecccc------------hheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHH
Confidence            4677889999999999999            6699997654   589999999986532211  1112234567999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..++.++|||||
T Consensus       193 ~~~~~~~~~~Diwsl  207 (277)
T cd05036         193 FLDGIFTSKTDVWSF  207 (277)
T ss_pred             HhcCCcCchhHHHHH
Confidence            988889999999985

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.09  E-value=3.8e-11  Score=88.82  Aligned_cols=78  Identities=33%  Similarity=0.522  Sum_probs=61.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc---------------cCCCcccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT---------------MAKRNTVI  152 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~---------------~~~~~~~~  152 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++.....               ........
T Consensus       110 i~~~l~~lH~~~i~H~dl~------------p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (305)
T cd05609         110 TVLALEYLHNYGIVHRDLK------------PDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVC  177 (305)
T ss_pred             HHHHHHHHHHCCccccCCc------------hHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCc
Confidence            3578889999999999999            66999999999999999998632100               00111245


Q ss_pred             ccccccccccccCCCCCccceEecC
Q psy3254         153 GTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       153 g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      |+..|+|||.+....++.++|+|||
T Consensus       178 ~~~~y~aPE~~~~~~~~~~~Di~sl  202 (305)
T cd05609         178 GTPEYIAPEVILRQGYGKPVDWWAM  202 (305)
T ss_pred             cCccccCchhccCCCCCchhhHHHH
Confidence            7888999999988889999999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.09  E-value=5e-11  Score=86.04  Aligned_cols=79  Identities=38%  Similarity=0.554  Sum_probs=63.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC----cccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR----NTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~----~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||++..........    ....++..|+|||+
T Consensus       107 ~i~~~l~~lh~~~i~H~dl~------------~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  174 (264)
T cd06626         107 QLLEGLAYLHSHGIVHRDIK------------PANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV  174 (264)
T ss_pred             HHHHHHHHHHHCCcccCCCC------------HHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhh
Confidence            34677889999999999999            669999999999999999987654332211    13467889999999


Q ss_pred             ccCCC---CCccceEecC
Q psy3254         163 IQEIG---YDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~---~~~~~Diws~  177 (177)
                      +.+..   ++.++|||||
T Consensus       175 ~~~~~~~~~~~~~Dv~s~  192 (264)
T cd06626         175 ITGGKGKGHGRAADIWSL  192 (264)
T ss_pred             ccCCCCCCCCcccchHHH
Confidence            98755   8889999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0576|consensus

Probab=99.09  E-value=2.5e-11  Score=95.14  Aligned_cols=77  Identities=51%  Similarity=0.864  Sum_probs=66.5

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccc---cC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~---~~  165 (177)
                      ...++|+|..+-+||+++-.            ||++...|.++++|||++..+......+..+.||++|||||+-   +.
T Consensus       122 l~gl~ylhs~gk~hRdiKGa------------nilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverk  189 (829)
T KOG0576|consen  122 LQGLKYLHSQGKIHRDIKGA------------NILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERK  189 (829)
T ss_pred             hccchhhhcCCccccccccc------------ceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhc
Confidence            45667899999899999855            9999999999999999998877666667788999999999987   35


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ++|+..+|||++
T Consensus       190 ggynqlcdiwa~  201 (829)
T KOG0576|consen  190 GGYNQLCDIWAL  201 (829)
T ss_pred             cccccccccccc
Confidence            689999999984

>KOG0592|consensus

Probab=99.09  E-value=8.9e-11  Score=90.09  Aligned_cols=69  Identities=22%  Similarity=0.430  Sum_probs=60.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGN   72 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~   72 (177)
                      |+.|.|||.+.|.--.+.+|+.-   .+..|+.+++.++|||++.|+.||.+|++++++.+||||....+.+
T Consensus       280 mlaG~PPFra~NeyliFqkI~~l---~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  280 MLAGQPPFRAANEYLIFQKIQAL---DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             HhcCCCCCccccHHHHHHHHHHh---cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence            68999999999999888899876   4444788999999999999999999999999999999998665443

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.09  E-value=3.4e-11  Score=86.63  Aligned_cols=75  Identities=31%  Similarity=0.474  Sum_probs=61.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.....   ......+..|+|||.+.+..
T Consensus       109 i~~al~~lH~~~~~H~dl~------------p~nili~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~y~~pe~~~~~~  173 (254)
T cd05083         109 VAEGMEYLESKKLVHRDLA------------ARNILVSEDGVAKVSDFGLARVGSMG---VDNSKLPVKWTAPEALKHKK  173 (254)
T ss_pred             HHHHHHHHHhCCeeccccC------------cceEEEcCCCcEEECCCccceecccc---CCCCCCCceecCHHHhccCC
Confidence            4677889999999999999            66999999999999999998754322   11223456799999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       174 ~~~~~Dv~sl  183 (254)
T cd05083         174 FSSKSDVWSY  183 (254)
T ss_pred             cCchhhHHHH
Confidence            9999999996

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.09  E-value=3.2e-11  Score=86.69  Aligned_cols=78  Identities=26%  Similarity=0.400  Sum_probs=62.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCc-cccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRN-TVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.......... ...++..|+|||.+...
T Consensus       112 l~~~l~~lh~~~~~h~dl~------------~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  179 (258)
T smart00219      112 IARGMEYLESKNFIHRDLA------------ARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDG  179 (258)
T ss_pred             HHHHHHHHhcCCeeecccc------------cceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccC
Confidence            3567789999999999999            6699999999999999999976543311111 12367889999999878


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+||+
T Consensus       180 ~~~~~~Di~sl  190 (258)
T smart00219      180 KFTSKSDVWSF  190 (258)
T ss_pred             CCCcchhHHHH
Confidence            89999999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.09  E-value=2.9e-11  Score=87.66  Aligned_cols=77  Identities=31%  Similarity=0.437  Sum_probs=60.6

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC-c--cccccccccccccccC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR-N--TVIGTPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~--~~~g~~~y~aPe~~~~  165 (177)
                      ..++.++|..+++|++++            ++|++++.++.++++|||++.......... .  ....+..|+|||++..
T Consensus       117 ~~al~~lH~~~i~H~dlk------------p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  184 (268)
T cd05063         117 AAGMKYLSDMNYVHRDLA------------ARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY  184 (268)
T ss_pred             HHHHHHHHHCCeeccccc------------hhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhc
Confidence            577789999999999999            669999999999999999997654321111 1  1123457999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       185 ~~~~~~~Dv~sl  196 (268)
T cd05063         185 RKFTSASDVWSF  196 (268)
T ss_pred             CCcChHhHHHHH
Confidence            888999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.08  E-value=5.3e-11  Score=85.80  Aligned_cols=78  Identities=36%  Similarity=0.593  Sum_probs=64.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||++....... ......|+..|+|||++...
T Consensus       108 ~i~~~l~~lh~~~i~h~dl~------------~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~  174 (258)
T cd05578         108 EIVLALEYLHSKGIIHRDIK------------PDNILLDEQGHVHITDFNIATKVTPDT-LTTSTSGTPGYMAPEVLCRQ  174 (258)
T ss_pred             HHHHHHHHHHhCCeeccCCC------------HHHeEEcCCCCEEEeecccccccCCCc-cccccCCChhhcCHHHHccc
Confidence            34778889999999999999            669999999999999999987654331 22345688899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+||+
T Consensus       175 ~~~~~~Di~sl  185 (258)
T cd05578         175 GYSVAVDWWSL  185 (258)
T ss_pred             CCCCcccchhh
Confidence            88999999996

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.08  E-value=6.1e-11  Score=87.78  Aligned_cols=74  Identities=46%  Similarity=0.762  Sum_probs=61.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++......    ....|+..|+|||++.   
T Consensus       124 l~~~L~~LH~~~i~H~dl~------------p~nIl~~~~~~~kL~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~  187 (307)
T cd06607         124 ALQGLAYLHSHERIHRDIK------------AGNILLTEPGTVKLADFGSASLVSPA----NSFVGTPYWMAPEVILAMD  187 (307)
T ss_pred             HHHHHHHHHHCCceecCCC------------cccEEECCCCCEEEeecCcceecCCC----CCccCCccccCceeeeccC
Confidence            4677889999999999999            66999999999999999998754322    2456888999999884   


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       188 ~~~~~~~sDv~s~  200 (307)
T cd06607         188 EGQYDGKVDVWSL  200 (307)
T ss_pred             CCCCCcccchHHH
Confidence            3568889999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG1025|consensus

Probab=99.08  E-value=5e-11  Score=95.59  Aligned_cols=81  Identities=31%  Similarity=0.463  Sum_probs=67.6

Q ss_pred             CcchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccc--ccccccccc
Q psy3254          85 GFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG--TPFWMAPEV  162 (177)
Q Consensus        85 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g--~~~y~aPe~  162 (177)
                      .+++..+++|++.++++||++.            .+|+|+.....+|+.|||+++.+...........|  .+.|||-|.
T Consensus       804 ~~QIAkgM~YLe~qrlVHrdLa------------aRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~  871 (1177)
T KOG1025|consen  804 CYQIAKGMKYLEEQRLVHRDLA------------ARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALES  871 (1177)
T ss_pred             HHHHHHHHHHHHhcchhhhhhh------------hhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHH
Confidence            3455789999999999999998            77999999999999999999987654333333333  568999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      ++...|+.++|||||
T Consensus       872 i~~~~~thqSDVWsf  886 (1177)
T KOG1025|consen  872 IRIRKYTHQSDVWSF  886 (1177)
T ss_pred             hhccCCCchhhhhhh
Confidence            999999999999997

>KOG0579|consensus

Probab=99.08  E-value=1.8e-10  Score=90.47  Aligned_cols=69  Identities=42%  Similarity=0.907  Sum_probs=65.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |+.+.||-.+.|+..++.+|.+..+|.+-.|..||.+++||+++||++||..||++.++++|||+....
T Consensus       228 MAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  228 MAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP  296 (1187)
T ss_pred             HhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence            678999999999999999999999999998999999999999999999999999999999999998644

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.08  E-value=4.1e-11  Score=85.60  Aligned_cols=78  Identities=50%  Similarity=0.848  Sum_probs=65.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||.+........ .....|+..|++||.+.+.
T Consensus       106 ~i~~~l~~lh~~~i~h~dl~------------p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~  172 (253)
T cd05122         106 ELLKGLEYLHSNGIIHRDIK------------AANILLTSDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGK  172 (253)
T ss_pred             HHHHHHHHhhcCCEecCCCC------------HHHEEEccCCeEEEeecccccccccccc-ccceecCCcccCHHHHcCC
Confidence            34678889999999999999            6699999999999999999876544321 3446788899999999887


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       173 ~~~~~~Dv~sl  183 (253)
T cd05122         173 PYDYKADIWSL  183 (253)
T ss_pred             CCCccccHHHH
Confidence            88899999985

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.07  E-value=4.5e-11  Score=86.18  Aligned_cols=79  Identities=34%  Similarity=0.530  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--------CCcccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--------KRNTVIGTPFWM  158 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~g~~~y~  158 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||++........        ......++..|+
T Consensus       101 qi~~~L~~lH~~~i~H~di~------------~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (265)
T cd05579         101 EIVLALEYLHSNGIIHRDLK------------PDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI  168 (265)
T ss_pred             HHHHHHHHHHHcCeecCCCC------------HHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCcccc
Confidence            45778889999999999999            6699999999999999999875432211        223356788999


Q ss_pred             ccccccCCCCCccceEecC
Q psy3254         159 APEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~~~~~~~~~Diws~  177 (177)
                      +||.+....++.++|+|||
T Consensus       169 ~Pe~~~~~~~~~~~Dv~sl  187 (265)
T cd05579         169 APEVILGQGHSKTVDWWSL  187 (265)
T ss_pred             CHHHhcCCCCCcchhhHHH
Confidence            9999988778899999985

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.07  E-value=5.7e-11  Score=85.15  Aligned_cols=78  Identities=44%  Similarity=0.740  Sum_probs=64.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++..............|+..|+|||...+..
T Consensus       108 i~~~l~~lH~~~i~H~dl~------------p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~  175 (254)
T cd06627         108 VLQGLAYLHEQGVIHRDIK------------AANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSG  175 (254)
T ss_pred             HHHHHHHHhhCCcccCCCC------------HHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCC
Confidence            3577789999999999999            6699999999999999999987654333233456888999999998777


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       176 ~~~~~Dv~~l  185 (254)
T cd06627         176 ASTASDIWSL  185 (254)
T ss_pred             CCcchhHHHH
Confidence            8899999985

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.07  E-value=5.7e-12  Score=91.18  Aligned_cols=79  Identities=27%  Similarity=0.457  Sum_probs=61.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|++++            ++|++++.++.+|++|||+++.....  ........+...|+|||.+.
T Consensus       111 ~i~~~l~~Lh~~~iiH~~l~------------~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~  178 (259)
T PF07714_consen  111 QIAEALSYLHSNNIIHGNLS------------PSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLK  178 (259)
T ss_dssp             HHHHHHHHHHHTTEEEST-S------------GGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHH
T ss_pred             cccccccccccccccccccc------------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            34688889999999999998            56999999999999999999876221  11122345677899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       179 ~~~~~~ksDVysf  191 (259)
T PF07714_consen  179 DGEYTKKSDVYSF  191 (259)
T ss_dssp             HSEESHHHHHHHH
T ss_pred             ccccccccccccc
Confidence            8889999999996

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.07  E-value=4.4e-11  Score=87.38  Aligned_cols=78  Identities=24%  Similarity=0.494  Sum_probs=62.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++........ ......|+..|+|||.+.+.
T Consensus       108 i~~~l~~lH~~~i~H~dl~------------p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07832         108 LLKGVAYMHANGIMHRDLK------------PANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA  175 (286)
T ss_pred             HHHHHHHHHHCCeecCCcC------------HHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeecc
Confidence            4677889999999999999            6699999999999999999986643321 22345688999999998654


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++||||+
T Consensus       176 ~~~~~~~Di~sl  187 (286)
T cd07832         176 RKYDPGVDLWAV  187 (286)
T ss_pred             ccCCchhHHHHH
Confidence             46889999985

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.07  E-value=3.7e-11  Score=87.15  Aligned_cols=77  Identities=29%  Similarity=0.525  Sum_probs=63.5

Q ss_pred             hHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|. .+++|++++            +.|++++.++.++++|||++....... ......|+..|++||.+.+.
T Consensus       122 l~~~l~~lh~~~~i~H~dl~------------~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~  188 (269)
T cd08528         122 MVLALRYLHKEKRIVHRDLT------------PNNIMLGEDDKVTITDFGLAKQKQPES-KLTSVVGTILYSCPEIVKNE  188 (269)
T ss_pred             HHHHHHHhccCCceeecCCC------------HHHEEECCCCcEEEecccceeeccccc-ccccccCcccCcChhhhcCC
Confidence            3567788985 679999999            669999999999999999997654432 33345688899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       189 ~~~~~~Dv~sl  199 (269)
T cd08528         189 PYGEKADVWAF  199 (269)
T ss_pred             CCchHHHHHHH
Confidence            89999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.07  E-value=3.7e-11  Score=86.48  Aligned_cols=78  Identities=26%  Similarity=0.393  Sum_probs=61.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++....... ......++..|+|||.+.++
T Consensus       109 l~~~l~~lH~~~i~h~dl~------------p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~  176 (256)
T cd05112         109 VCEGMAYLESSNVIHRDLA------------ARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFS  176 (256)
T ss_pred             HHHHHHHHHHCCccccccc------------cceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccC
Confidence            3577789999999999999            6699999999999999999875533211 11122345689999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       177 ~~~~~~Dv~sl  187 (256)
T cd05112         177 KYSSKSDVWSF  187 (256)
T ss_pred             CcChHHHHHHH
Confidence            89999999985

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG1027|consensus

Probab=99.07  E-value=5.6e-11  Score=95.07  Aligned_cols=79  Identities=29%  Similarity=0.368  Sum_probs=64.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---C--CCeEEeeeecccccccccC---CCcccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---E--GHAKLADFGVAGQLTDTMA---KRNTVIGTPFWM  158 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~--~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~  158 (177)
                      +..+++..+|..+++|||++            |+|||+..   +  ..++|+|||+++.+.....   +.....||-+|+
T Consensus       614 q~~~GlaHLHsl~iVHRDLk------------PQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~  681 (903)
T KOG1027|consen  614 QIASGLAHLHSLKIVHRDLK------------PQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQ  681 (903)
T ss_pred             HHHHHHHHHHhcccccccCC------------CceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCccccc
Confidence            34678889999999999999            77999976   3  3689999999998754322   234567999999


Q ss_pred             ccccccCCCCCccceEecC
Q psy3254         159 APEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~~~~~~~~~Diws~  177 (177)
                      |||.+....-+.++||+|+
T Consensus       682 APE~L~~~~~~~avDiFsl  700 (903)
T KOG1027|consen  682 APEQLREDRKTQAVDIFSL  700 (903)
T ss_pred             CHHHHhccccCcccchhhc
Confidence            9999988776778999985

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.06  E-value=4.1e-11  Score=86.70  Aligned_cols=78  Identities=37%  Similarity=0.651  Sum_probs=63.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc------cCCCccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT------MAKRNTVIGTPFWMAPE  161 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~g~~~y~aPe  161 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++......      ........|+..|+|||
T Consensus       111 i~~~l~~lH~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  178 (265)
T cd06631         111 ILDGVAYLHNNCVVHRDIK------------GNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPE  178 (265)
T ss_pred             HHHHHHHHHhCCcccCCcC------------HHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChh
Confidence            3577889999999999999            66999999999999999998754211      11122356889999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      ++.+..++.++|+|||
T Consensus       179 ~~~~~~~~~~~Dv~sl  194 (265)
T cd06631         179 VINESGYGRKSDIWSI  194 (265)
T ss_pred             hhcCCCCcchhhHHHH
Confidence            9988888999999985

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.06  E-value=6e-11  Score=86.08  Aligned_cols=78  Identities=31%  Similarity=0.436  Sum_probs=60.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---Ccccc--cccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---RNTVI--GTPFWMAPEV  162 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~--g~~~y~aPe~  162 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++........   .....  ++..|+|||.
T Consensus       115 l~~al~~lH~~g~~H~dl~------------p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  182 (269)
T cd05065         115 IAAGMKYLSEMNYVHRDLA------------ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA  182 (269)
T ss_pred             HHHHHHHHHHCCEeecccC------------hheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhH
Confidence            3577789999999999999            66999999999999999998765332111   11111  2357999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..++.++|||||
T Consensus       183 ~~~~~~~~~~Dvwsl  197 (269)
T cd05065         183 IAYRKFTSASDVWSY  197 (269)
T ss_pred             hccCcccchhhhhhh
Confidence            988889999999996

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.06  E-value=6.2e-11  Score=85.17  Aligned_cols=77  Identities=31%  Similarity=0.547  Sum_probs=62.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++|++++.++ .++++|||++....... ......|+..|+|||.+.+.
T Consensus       110 i~~~l~~lh~~~i~h~dl~------------~~nil~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  176 (256)
T cd08220         110 ILLALHHVHTKLILHRDLK------------TQNILLDKHKMVVKIGDFGISKILSSKS-KAYTVVGTPCYISPELCEGK  176 (256)
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEEccCCCceecCCCc-cccccccCCcccCchhccCC
Confidence            4677889999999999999            6699997554 57999999998664432 22335688899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       177 ~~~~~~Dv~sl  187 (256)
T cd08220         177 PYNQKSDIWAL  187 (256)
T ss_pred             CCCcccchHHH
Confidence            88999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.06  E-value=7.3e-11  Score=86.38  Aligned_cols=76  Identities=41%  Similarity=0.644  Sum_probs=59.8

Q ss_pred             hHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|. .+++|++++            ++|++++.++.++++|||++..+...  ......|+..|+|||.+.+.
T Consensus       111 i~~~l~~LH~~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  176 (286)
T cd06622         111 VVKGLKFLKEEHNIIHRDVK------------PTNVLVNGNGQVKLCDFGVSGNLVAS--LAKTNIGCQSYMAPERIKSG  176 (286)
T ss_pred             HHHHHHHHHhcCCEeeCCCC------------HHHEEECCCCCEEEeecCCcccccCC--ccccCCCccCccCcchhcCC
Confidence            3567788986 489999999            66999999999999999998765432  22335688899999998543


Q ss_pred             ------CCCccceEecC
Q psy3254         167 ------GYDCVADMWSL  177 (177)
Q Consensus       167 ------~~~~~~Diws~  177 (177)
                            .++.++|+|||
T Consensus       177 ~~~~~~~~~~~~Diwsl  193 (286)
T cd06622         177 GPNQNPTYTVQSDVWSL  193 (286)
T ss_pred             CCCccCCCCcccchHhH
Confidence                  35788999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.06  E-value=4.9e-11  Score=85.74  Aligned_cols=77  Identities=43%  Similarity=0.712  Sum_probs=63.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++....... ......|+..|++||.+....
T Consensus       111 i~~~l~~lH~~~i~H~dl~------------~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~  177 (258)
T cd06632         111 ILLGLEYLHDRNTVHRDIK------------GANILVDTNGVVKLADFGMAKQVVEFS-FAKSFKGSPYWMAPEVIAQQG  177 (258)
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEECCCCCEEEccCccceeccccc-cccccCCCcceeCHHHhcCCC
Confidence            4678889999999999999            669999999999999999987654332 223456888999999987765


Q ss_pred             -CCccceEecC
Q psy3254         168 -YDCVADMWSL  177 (177)
Q Consensus       168 -~~~~~Diws~  177 (177)
                       ++.++|+|||
T Consensus       178 ~~~~~~D~~sl  188 (258)
T cd06632         178 GYGLAADIWSL  188 (258)
T ss_pred             CCCchhhhHHH
Confidence             8899999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG4278|consensus

Probab=99.05  E-value=7e-11  Score=92.55  Aligned_cols=129  Identities=21%  Similarity=0.267  Sum_probs=87.1

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcC-----ccc---ccCCCCCCCCCC---------CCCCCCCCcchHHHHhhhch
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNH-----EFI---QVSPGGNIPPGP---------PGAPSGGGFCDFEFLKFLSY   97 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h-----~~~---~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~l~~   97 (177)
                      +-++.+|++..-++.--+.|...++|.-     ||.   +.+..+++..+.         ..-...+..++..++.|+..
T Consensus       304 tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk  383 (1157)
T KOG4278|consen  304 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK  383 (1157)
T ss_pred             chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH
Confidence            3466777777766666677887777642     332   112222211100         00001122344678889999


Q ss_pred             hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccc---cccccccccccCCCCCccceE
Q psy3254          98 DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG---TPFWMAPEVIQEIGYDCVADM  174 (177)
Q Consensus        98 ~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g---~~~y~aPe~~~~~~~~~~~Di  174 (177)
                      ..++|+|+.            .+|.|+..+..+|++|||++|.+..+..  +...|   ...|.|||.+..+.|+-++||
T Consensus       384 knFIHRDLA------------ARNCLVgEnhiVKvADFGLsRlMtgDTY--TAHAGAKFPIKWTAPEsLAyNtFSiKSDV  449 (1157)
T KOG4278|consen  384 KNFIHRDLA------------ARNCLVGENHIVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNTFSIKSDV  449 (1157)
T ss_pred             hhhhhhhhh------------hhhccccccceEEeeccchhhhhcCCce--ecccCccCcccccCcccccccccccchhh
Confidence            999999998            6799999999999999999998764421  12222   457999999999999999999


Q ss_pred             ecC
Q psy3254         175 WSL  177 (177)
Q Consensus       175 ws~  177 (177)
                      |+|
T Consensus       450 WAF  452 (1157)
T KOG4278|consen  450 WAF  452 (1157)
T ss_pred             HHH
Confidence            986

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.05  E-value=6.5e-11  Score=86.31  Aligned_cols=77  Identities=26%  Similarity=0.379  Sum_probs=61.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            +.|++++. +.++++|||+++.+.... ......++..|+|||++.. 
T Consensus       108 qi~~~L~~LH~~~i~H~dl~------------p~ni~l~~-~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  173 (282)
T cd07831         108 QLLKSLDHMHRNGIFHRDIK------------PENILIKD-DILKLADFGSCRGIYSKP-PYTEYISTRWYRAPECLLTD  173 (282)
T ss_pred             HHHHHHHHHHHCCceecccC------------HHHEEEcC-CCeEEEecccccccccCC-CcCCCCCCcccCChhHhhcC
Confidence            34677889999999999999            66999999 999999999998654332 2233568889999998754 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       174 ~~~~~~~Di~sl  185 (282)
T cd07831         174 GYYGPKMDIWAV  185 (282)
T ss_pred             CCCCcchhHHHH
Confidence            457889999985

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.05  E-value=5.4e-11  Score=87.60  Aligned_cols=78  Identities=40%  Similarity=0.664  Sum_probs=61.4

Q ss_pred             chHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|. .+++|++++            ++|++++.++.++++|||++..+..... .....++..|+|||.+..
T Consensus       122 ~i~~~l~~lH~~~~i~H~dl~------------p~nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~  188 (296)
T cd06618         122 AIVKALHYLKEKHGVIHRDVK------------PSNILLDASGNVKLCDFGISGRLVDSKA-KTRSAGCAAYMAPERIDP  188 (296)
T ss_pred             HHHHHHHHHHhhCCEecCCCc------------HHHEEEcCCCCEEECccccchhccCCCc-ccCCCCCccccCHhhcCC
Confidence            44677889997 589999999            6699999999999999999876543322 223357888999999875


Q ss_pred             C----CCCccceEecC
Q psy3254         166 I----GYDCVADMWSL  177 (177)
Q Consensus       166 ~----~~~~~~Diws~  177 (177)
                      .    .++.++|||||
T Consensus       189 ~~~~~~~~~~~Di~sl  204 (296)
T cd06618         189 PDPNPKYDIRADVWSL  204 (296)
T ss_pred             CCCccccccchhHHHH
Confidence            4    37889999985

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.05  E-value=5.2e-11  Score=89.21  Aligned_cols=78  Identities=29%  Similarity=0.447  Sum_probs=61.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--------------cCCCccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--------------MAKRNTVIG  153 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--------------~~~~~~~~g  153 (177)
                      ...+++++|..+++|++++            ++|++++.++.++++|||+++.....              ........+
T Consensus       128 l~~aL~~LH~~~i~H~dl~------------~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (335)
T PTZ00024        128 ILNGLNVLHKWYFMHRDLS------------PANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVV  195 (335)
T ss_pred             HHHHHHHHHhCCeeccccc------------HHHeEECCCCCEEECCccceeeccccccccccccccccccccccccccc
Confidence            4677889999999999999            56999999999999999998765411              111122356


Q ss_pred             cccccccccccCC-CCCccceEecC
Q psy3254         154 TPFWMAPEVIQEI-GYDCVADMWSL  177 (177)
Q Consensus       154 ~~~y~aPe~~~~~-~~~~~~Diws~  177 (177)
                      +..|+|||++.+. .++.++|+||+
T Consensus       196 ~~~y~aPE~~~~~~~~~~~~Dv~sl  220 (335)
T PTZ00024        196 TLWYRAPELLMGAEKYHFAVDMWSV  220 (335)
T ss_pred             ccCCCCChhcccCCCCCcHHHHHHH
Confidence            7889999998763 47889999985

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.05  E-value=1.3e-10  Score=84.84  Aligned_cols=78  Identities=24%  Similarity=0.443  Sum_probs=63.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            +.|++++.++.++++|||+++...... ......|+..|+|||++.. 
T Consensus       107 ~l~~~l~~Lh~~~i~H~dl~------------~~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~  173 (283)
T cd07830         107 QILQGLAHIHKHGFFHRDLK------------PENLLVSGPEVVKIADFGLAREIRSRP-PYTDYVSTRWYRAPEILLRS  173 (283)
T ss_pred             HHHHHHHHHHHCCcccCCCC------------hhhEEEcCCCCEEEeecccceeccCCC-CcCCCCCcccccCceeeecC
Confidence            34677889999999999999            569999999999999999997654321 2234568889999998854 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       174 ~~~~~~~Di~s~  185 (283)
T cd07830         174 TSYSSPVDIWAL  185 (283)
T ss_pred             cCcCCccchhhH
Confidence            457889999996

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG3653|consensus

Probab=99.05  E-value=2.8e-11  Score=91.41  Aligned_cols=77  Identities=26%  Similarity=0.402  Sum_probs=56.1

Q ss_pred             HHHHhhhchh---------hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccc
Q psy3254          89 FEFLKFLSYD---------DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFW  157 (177)
Q Consensus        89 ~~~l~~l~~~---------~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y  157 (177)
                      .+++.++|..         .|+|||+|            .+|+|+..++...|+|||+|..+.....  ..-..+||.+|
T Consensus       317 arGLa~LHee~p~~d~~Kp~IaHRDlk------------SkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RY  384 (534)
T KOG3653|consen  317 ARGLAHLHEELPRGDHHKPPIAHRDLK------------SKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRY  384 (534)
T ss_pred             HHHHHHhcccCCcCCCCCCcccccccc------------ccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhh
Confidence            4555667643         47788888            5699999999999999999987754322  12236899999


Q ss_pred             cccccccCC-CCC-----ccceEecC
Q psy3254         158 MAPEVIQEI-GYD-----CVADMWSL  177 (177)
Q Consensus       158 ~aPe~~~~~-~~~-----~~~Diws~  177 (177)
                      ||||++.+. .+.     .+.||||+
T Consensus       385 MAPEvLEgainl~d~~Afkr~DvYam  410 (534)
T KOG3653|consen  385 MAPEVLEGAINLQDRDAFKRIDVYAM  410 (534)
T ss_pred             cCHHHHhhhcccccHHHHHHHHHHHH
Confidence            999999763 232     35788874

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.05  E-value=6.3e-11  Score=85.76  Aligned_cols=79  Identities=30%  Similarity=0.545  Sum_probs=63.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccC----CCccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPE  161 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe  161 (177)
                      ....++.++|..+++|++++            +.|++++.++ .++++|||.+..+.....    ......|+..|+|||
T Consensus       111 ql~~al~~LH~~~i~H~~i~------------~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE  178 (268)
T cd06630         111 QLLRGLSYLHENQIIHRDVK------------GANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPE  178 (268)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHh
Confidence            44778889999999999999            6699998766 599999999876543211    122356888999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      .+.+..++.++|+||+
T Consensus       179 ~~~~~~~~~~~Dv~sl  194 (268)
T cd06630         179 VLRGEQYGRSCDVWSV  194 (268)
T ss_pred             HhccCCCCcccchHHH
Confidence            9988888999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.05  E-value=4.1e-11  Score=86.45  Aligned_cols=77  Identities=30%  Similarity=0.412  Sum_probs=61.2

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..++.++|..+++|++++            +.|++++.++.++++|||+++.+..... ......++..|+|||.+.+..
T Consensus       113 ~~al~~lh~~~i~h~di~------------p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  180 (261)
T cd05034         113 AEGMAYLESRNYIHRDLA------------ARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGR  180 (261)
T ss_pred             HHHHHHHHhCCcccCCcc------------hheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCC
Confidence            567789999999999999            6699999999999999999876543211 111223456799999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       181 ~~~~~Di~sl  190 (261)
T cd05034         181 FTIKSDVWSF  190 (261)
T ss_pred             cCchhHHHHH
Confidence            9999999985

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.05  E-value=5.7e-11  Score=85.42  Aligned_cols=78  Identities=40%  Similarity=0.655  Sum_probs=63.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC-eEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH-AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++. ++++|||.+..............|+..|+|||++...
T Consensus       110 l~~~l~~lh~~~i~H~dl~------------~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~  177 (257)
T cd08225         110 ISLGLKHIHDRKILHRDIK------------SQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNR  177 (257)
T ss_pred             HHHHHHHHHHCCcccccCC------------HHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCC
Confidence            4678889999999999999            66999988764 6999999987665433333345688899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       178 ~~~~~~Dv~sl  188 (257)
T cd08225         178 PYNNKTDIWSL  188 (257)
T ss_pred             CCCchhhHHHH
Confidence            88999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.04  E-value=5.7e-11  Score=86.40  Aligned_cols=78  Identities=23%  Similarity=0.365  Sum_probs=62.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc-cCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++..... ........++..|+|||.+.+.
T Consensus       126 l~~~l~~LH~~~i~H~dlk------------p~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  193 (275)
T cd05046         126 IALGMDHLSNARFVHRDLA------------ARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQED  193 (275)
T ss_pred             HHHHHHHhhhcCcccCcCc------------cceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccC
Confidence            4677889999999999999            66999999999999999998754321 1122334567789999999887


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       194 ~~~~~~Di~sl  204 (275)
T cd05046         194 DFSTKSDVWSF  204 (275)
T ss_pred             CCCchhhHHHH
Confidence            88899999985

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.04  E-value=9.6e-11  Score=83.91  Aligned_cols=79  Identities=39%  Similarity=0.601  Sum_probs=65.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|..+++|++++            +.|++++.++.++++|||++..............++..|++||...+.
T Consensus       101 qi~~~l~~lh~~~~~H~~l~------------p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~  168 (250)
T cd05123         101 EIVLALEYLHSLGIIYRDLK------------PENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGK  168 (250)
T ss_pred             HHHHHHHHHHHCCceecCCC------------cceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCC
Confidence            34678889999999999999            569999999999999999987654432233445688899999999887


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       169 ~~~~~~D~~sl  179 (250)
T cd05123         169 GYGKAVDWWSL  179 (250)
T ss_pred             CCCchhhHHHH
Confidence            78889999985

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.04  E-value=5.7e-11  Score=85.77  Aligned_cols=75  Identities=28%  Similarity=0.405  Sum_probs=59.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC--------eEEeeeecccccccccCCCcccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH--------AKLADFGVAGQLTDTMAKRNTVIGTPFWM  158 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~--------~~l~dfg~~~~~~~~~~~~~~~~g~~~y~  158 (177)
                      ....++.++|..+++|++++            +.|++++.++.        ++++|||++.....    .....++..|+
T Consensus       108 qi~~~l~~lH~~~iiH~dlk------------p~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~----~~~~~~~~~y~  171 (258)
T cd05078         108 QLAWALHFLEDKGLTHGNVC------------AKNVLLIREEDRKTGNPPFIKLSDPGISITVLP----KEILLERIPWV  171 (258)
T ss_pred             HHHHHHHHHHHCCeecCCCc------------cceEEEecccccccCCCceEEecccccccccCC----chhccccCCcc
Confidence            34577889999999999999            66999977654        68999998865432    22356788999


Q ss_pred             ccccccC-CCCCccceEecC
Q psy3254         159 APEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~~-~~~~~~~Diws~  177 (177)
                      |||++.+ ..++.++|||||
T Consensus       172 aPE~~~~~~~~~~~~Diwsl  191 (258)
T cd05078         172 PPECIENPQNLSLAADKWSF  191 (258)
T ss_pred             CchhccCCCCCCchhhHHHH
Confidence            9999986 458889999995

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.03  E-value=6.3e-11  Score=86.71  Aligned_cols=75  Identities=41%  Similarity=0.687  Sum_probs=61.2

Q ss_pred             HHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          89 FEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        89 ~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..++.++|. .+++|++++            ++|++++.++.++++|||++......  .....+|+..|+|||++.+..
T Consensus       113 ~~~l~~LH~~~~i~H~dl~------------p~nil~~~~~~~~l~d~gl~~~~~~~--~~~~~~~~~~~~aPE~~~~~~  178 (284)
T cd06620         113 VEGLTYLYNVHRIMHRDIK------------PSNILVNSRGQIKLCDFGVSGELINS--IADTFVGTSTYMSPERIQGGK  178 (284)
T ss_pred             HHHHHHHHHhcCeeccCCC------------HHHEEECCCCcEEEccCCcccchhhh--ccCccccCcccCCHHHHccCC
Confidence            566778886 579999999            66999999999999999998754322  223457899999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       179 ~~~~~Di~sl  188 (284)
T cd06620         179 YTVKSDVWSL  188 (284)
T ss_pred             CCccchHHHH
Confidence            9999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.03  E-value=6.1e-11  Score=87.96  Aligned_cols=79  Identities=22%  Similarity=0.413  Sum_probs=62.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-------CCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-------KRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~y~a  159 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||.+..+.....       ......++..|+|
T Consensus       109 ~l~~~L~~LH~~~ivH~dlk------------~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (314)
T cd08216         109 DVLNALDYIHSKGFIHRSVK------------ASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLS  176 (314)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------cceEEEecCCceEEecCccceeeccccccccccccccccccccccccC
Confidence            44778899999999999999            6699999999999999998865432111       1223457778999


Q ss_pred             cccccC--CCCCccceEecC
Q psy3254         160 PEVIQE--IGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~--~~~~~~~Diws~  177 (177)
                      ||++..  ..|+.++|+|||
T Consensus       177 PE~~~~~~~~~~~~~Diws~  196 (314)
T cd08216         177 PEVLQQNLQGYNEKSDIYSV  196 (314)
T ss_pred             HHHhcCCCCCCCcchhHHHH
Confidence            999875  358899999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.03  E-value=8.5e-11  Score=84.41  Aligned_cols=76  Identities=36%  Similarity=0.536  Sum_probs=64.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||+++.....  ......|+..|++||.+.+..
T Consensus       112 l~~al~~lh~~~i~h~~l~------------~~ni~~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~  177 (256)
T cd08530         112 LLRGLQALHEQKILHRDLK------------SANILLVANDLVKIGDLGISKVLKKN--MAKTQIGTPHYMAPEVWKGRP  177 (256)
T ss_pred             HHHHHHHHhhCCcccCCCC------------cceEEEecCCcEEEeeccchhhhccC--CcccccCCccccCHHHHCCCC
Confidence            4677889999999999999            55999999999999999999766543  222356888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       178 ~~~~~D~~sl  187 (256)
T cd08530         178 YSYKSDIWSL  187 (256)
T ss_pred             CCchhhHHHH
Confidence            8999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.03  E-value=7.2e-11  Score=86.18  Aligned_cols=79  Identities=33%  Similarity=0.503  Sum_probs=63.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||++........ ......++..|+|||.+.+
T Consensus       108 ~i~~al~~LH~~~~~h~dl~------------p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  175 (287)
T cd07840         108 QLLEGLQYLHSNGILHRDIK------------GSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLG  175 (287)
T ss_pred             HHHHHHHHHHHCCceeccCc------------HHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEc
Confidence            34677889999999999999            6699999999999999999986644321 1223457888999998765


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..++.++|||||
T Consensus       176 ~~~~~~~~Dv~sl  188 (287)
T cd07840         176 ATRYGPEVDMWSV  188 (287)
T ss_pred             cccCChHHHHHHH
Confidence             457899999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.02  E-value=1.3e-10  Score=84.78  Aligned_cols=78  Identities=28%  Similarity=0.523  Sum_probs=61.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---Ccccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++.........   .....++..|++||.+.
T Consensus       118 l~~aL~~lH~~~i~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  185 (284)
T cd05038         118 ICKGMDYLGSQRYIHRDLA------------ARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR  185 (284)
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHc
Confidence            3667889999999999999            66999999999999999999865422111   11223456799999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       186 ~~~~~~~~Di~sl  198 (284)
T cd05038         186 TSKFSSASDVWSF  198 (284)
T ss_pred             cCCCCcccchHHH
Confidence            8889999999996

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.02  E-value=1.2e-10  Score=84.61  Aligned_cols=79  Identities=34%  Similarity=0.666  Sum_probs=62.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||+++.......  ......|+..|+|||++.
T Consensus       116 qi~~~l~~lH~~~i~H~dl~------------~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  183 (272)
T cd06629         116 QVLEGLAYLHSKGILHRDLK------------ADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIH  183 (272)
T ss_pred             HHHHHHHHHhhCCeeecCCC------------hhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhc
Confidence            34677889999999999999            6699999999999999999976543211  123346888999999987


Q ss_pred             CCC--CCccceEecC
Q psy3254         165 EIG--YDCVADMWSL  177 (177)
Q Consensus       165 ~~~--~~~~~Diws~  177 (177)
                      ...  ++.++|+|||
T Consensus       184 ~~~~~~~~~~Dv~sl  198 (272)
T cd06629         184 SYSQGYSAKVDIWSL  198 (272)
T ss_pred             cccCCCCccchhHHH
Confidence            644  8889999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.02  E-value=1.2e-10  Score=86.38  Aligned_cols=74  Identities=45%  Similarity=0.749  Sum_probs=60.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++......    ....|+..|+|||.+.   
T Consensus       124 l~~~l~~LH~~~i~H~dl~------------p~nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~  187 (308)
T cd06634         124 ALQGLAYLHSHNMIHRDVK------------AGNILLSEPGLVKLGDFGSASIMAPA----NXFVGTPYWMAPEVILAMD  187 (308)
T ss_pred             HHHHHHHHHhCCcccCCCC------------HHhEEECCCCcEEECCcccceeecCc----ccccCCccccCHHHHhhcc
Confidence            3577889999999999999            66999999999999999998754332    2356888999999975   


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       188 ~~~~~~~~Di~sl  200 (308)
T cd06634         188 EGQYDGKVDVWSL  200 (308)
T ss_pred             cCCCCcccchHHH
Confidence            3457889999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.01  E-value=1.3e-10  Score=86.50  Aligned_cols=74  Identities=46%  Similarity=0.769  Sum_probs=60.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++.....    .....|+..|+|||++.   
T Consensus       134 i~~~l~~lH~~~i~H~dL~------------p~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~  197 (317)
T cd06635         134 ALQGLAYLHSHNMIHRDIK------------AGNILLTEPGQVKLADFGSASIASP----ANSFVGTPYWMAPEVILAMD  197 (317)
T ss_pred             HHHHHHHHHHCCcccCCCC------------cccEEECCCCCEEEecCCCccccCC----cccccCCccccChhhhhcCC
Confidence            4677889999999999999            6699999999999999998865432    22456888999999974   


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      .+.++.++|+|||
T Consensus       198 ~~~~~~~~Dv~sl  210 (317)
T cd06635         198 EGQYDGKVDVWSL  210 (317)
T ss_pred             CCCCCccccHHHH
Confidence            3568889999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.01  E-value=7.6e-11  Score=88.08  Aligned_cols=78  Identities=22%  Similarity=0.440  Sum_probs=59.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-------Ccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-------RNTVIGTPFWMAP  160 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~g~~~y~aP  160 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||.+.........       .....++..|+||
T Consensus       110 i~~~L~~LH~~~iiH~dlk------------p~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  177 (327)
T cd08227         110 VLKALDYIHHMGYVHRSVK------------ASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSP  177 (327)
T ss_pred             HHHHHHHHHHCCEecCCCC------------hhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccCh
Confidence            4678889999999999999            66999999999999999865433211110       1123567789999


Q ss_pred             ccccC--CCCCccceEecC
Q psy3254         161 EVIQE--IGYDCVADMWSL  177 (177)
Q Consensus       161 e~~~~--~~~~~~~Diws~  177 (177)
                      |++.+  ..|+.++|||||
T Consensus       178 E~~~~~~~~~~~~~Diwsl  196 (327)
T cd08227         178 EVLQQNLQGYDAKSDIYSV  196 (327)
T ss_pred             HHhhcccCCCCchhhHHHH
Confidence            99976  458999999995

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0607|consensus

Probab=99.00  E-value=1.3e-10  Score=84.37  Aligned_cols=77  Identities=31%  Similarity=0.515  Sum_probs=58.7

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC---CeEEeeeecccccc--cc-----cCCCcccccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG---HAKLADFGVAGQLT--DT-----MAKRNTVIGTPFWM  158 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~---~~~l~dfg~~~~~~--~~-----~~~~~~~~g~~~y~  158 (177)
                      ..+++++|..+|.|+|+|            |+||+.....   -+|++||-+...+.  .+     .....+.+|+..||
T Consensus       186 a~aLdFlH~kgIAHRDlK------------PENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfM  253 (463)
T KOG0607|consen  186 ASALDFLHTKGIAHRDLK------------PENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFM  253 (463)
T ss_pred             HHHHHHHhhcCcccccCC------------ccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhc
Confidence            567789999999999999            7799987654   48999998765331  11     11234578999999


Q ss_pred             cccccc-----CCCCCccceEecC
Q psy3254         159 APEVIQ-----EIGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~-----~~~~~~~~Diws~  177 (177)
                      |||+..     ...|++++|.|||
T Consensus       254 APEVVd~fv~qA~~YDKrCDlwSL  277 (463)
T KOG0607|consen  254 APEVVDVFVDQATFYDKRCDLWSL  277 (463)
T ss_pred             chhHHhhhccccccccccccHHHH
Confidence            999884     2469999999996

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.00  E-value=1.2e-10  Score=85.81  Aligned_cols=78  Identities=31%  Similarity=0.453  Sum_probs=61.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||++........ ......++..|+|||.+.+ 
T Consensus       125 i~~aL~~LH~~~i~H~dl~------------p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  192 (302)
T cd07864         125 LLEGLNYCHKKNFLHRDIK------------CSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGE  192 (302)
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCC
Confidence            4678889999999999999            6699999999999999999986543321 1222356778999998865 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       193 ~~~~~~~Di~sl  204 (302)
T cd07864         193 ERYGPAIDVWSC  204 (302)
T ss_pred             CCCCchhHHHHH
Confidence            457889999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.00  E-value=8.4e-11  Score=88.50  Aligned_cols=76  Identities=29%  Similarity=0.469  Sum_probs=62.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||+++.....   .....++..|+|||.+.+ 
T Consensus       126 qi~~al~~LH~~gi~H~dlk------------p~Nill~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~  190 (343)
T cd07880         126 QMLKGLKYIHAAGIIHRDLK------------PGNLAVNEDCELKILDFGLARQTDSE---MTGYVVTRWYRAPEVILNW  190 (343)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEeecccccccccC---ccccccCCcccCHHHHhCC
Confidence            34678889999999999999            66999999999999999999765432   223467889999999876 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+||+
T Consensus       191 ~~~~~~~Di~sl  202 (343)
T cd07880         191 MHYTQTVDIWSV  202 (343)
T ss_pred             CCCCcHHHHHHH
Confidence            457889999985

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.00  E-value=1.1e-10  Score=85.62  Aligned_cols=76  Identities=42%  Similarity=0.719  Sum_probs=63.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||++.......  .....++..|+|||.+.+..
T Consensus       114 i~~~L~~lH~~~i~H~dl~------------~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~  179 (287)
T cd06621         114 VLKGLSYLHSRKIIHRDIK------------PSNILLTRKGQVKLCDFGVSGELVNSL--AGTFTGTSFYMAPERIQGKP  179 (287)
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEEecCCeEEEeeccccccccccc--cccccCCccccCHHHhcCCC
Confidence            4678889999999999999            569999999999999999987554321  12345788999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       180 ~~~~~Dv~sl  189 (287)
T cd06621         180 YSITSDVWSL  189 (287)
T ss_pred             CCchhhHHHH
Confidence            9999999985

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.00  E-value=1e-10  Score=85.12  Aligned_cols=79  Identities=29%  Similarity=0.483  Sum_probs=64.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--------------------C
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--------------------A  146 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--------------------~  146 (177)
                      ....++.++|..++.|++++            ++|++++.++.++++|||++.......                    .
T Consensus       110 ql~~~l~~Lh~~~~~H~dl~------------~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (280)
T cd05581         110 EILLALEYLHSKGIIHRDLK------------PENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR  177 (280)
T ss_pred             HHHHHHHHHHHCCeeecCCC------------HHHeEECCCCCEEecCCccccccCCccccccCCCCCcccccccccccc
Confidence            34677889999999999999            669999999999999999987654321                    1


Q ss_pred             CCccccccccccccccccCCCCCccceEecC
Q psy3254         147 KRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       147 ~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ......|+..|+|||++....++.++|+|||
T Consensus       178 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~sl  208 (280)
T cd05581         178 RFASFVGTAEYVSPELLNEKPAGKSSDLWAL  208 (280)
T ss_pred             ccccccCCccccCHHHhCCCCCChhhhHHHH
Confidence            1223467889999999988888899999985

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.00  E-value=9.6e-11  Score=88.15  Aligned_cols=76  Identities=28%  Similarity=0.502  Sum_probs=62.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...+++.++|..+++|++++            ++|++++.++.++++|||++......   .....++..|+|||.+.+ 
T Consensus       126 ql~~aL~~LH~~gi~H~dlk------------p~Nill~~~~~~kL~dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~  190 (343)
T cd07851         126 QILRGLKYIHSAGIIHRDLK------------PSNIAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW  190 (343)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHeEECCCCCEEEcccccccccccc---ccCCcccccccCHHHHhCC
Confidence            34678889999999999999            66999999999999999999765432   233467889999999865 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       191 ~~~~~~~Dvwsl  202 (343)
T cd07851         191 MHYNQTVDIWSV  202 (343)
T ss_pred             CCCCchHhHHHH
Confidence            367889999985

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.99  E-value=1.3e-10  Score=86.90  Aligned_cols=75  Identities=29%  Similarity=0.491  Sum_probs=61.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-C
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-I  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~  166 (177)
                      ..+++.++|..+++|++++            +.|++++.++.++++|||+++....   ......++..|+|||++.+ .
T Consensus       117 l~~aL~~LH~~~iiH~dl~------------p~Nili~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~  181 (328)
T cd07856         117 ILRGLKYVHSAGVVHRDLK------------PSNILINENCDLKICDFGLARIQDP---QMTGYVSTRYYRAPEIMLTWQ  181 (328)
T ss_pred             HHHHHHHHHhCCcccCCCC------------HHHEeECCCCCEEeCccccccccCC---CcCCCcccccccCceeeeccC
Confidence            4577889999999999999            6699999999999999999875432   2233567889999999866 5


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|+|||
T Consensus       182 ~~~~~~Dv~sl  192 (328)
T cd07856         182 KYDVEVDIWSA  192 (328)
T ss_pred             CcCcHHHHHHH
Confidence            68899999985

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.99  E-value=1.8e-10  Score=84.42  Aligned_cols=79  Identities=34%  Similarity=0.431  Sum_probs=62.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++.++|..+++|++++            +.|++++.++.++++|||+++....... ......|+..|++||.+.+
T Consensus       113 ql~~~l~~lH~~~~~H~dl~------------p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (288)
T cd05583         113 EIVLALDHLHQLGIIYRDIK------------LENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRG  180 (288)
T ss_pred             HHHHHHHHHHHCCeeccCCC------------HHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcC
Confidence            34677889999999999999            6699999999999999999876543221 1223468889999999876


Q ss_pred             CC--CCccceEecC
Q psy3254         166 IG--YDCVADMWSL  177 (177)
Q Consensus       166 ~~--~~~~~Diws~  177 (177)
                      ..  ++.++|+|||
T Consensus       181 ~~~~~~~~~Dv~sl  194 (288)
T cd05583         181 GSGGHDKAVDWWSL  194 (288)
T ss_pred             CCCCCcchhhhHHH
Confidence            54  6788999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.99  E-value=1.8e-10  Score=85.62  Aligned_cols=75  Identities=45%  Similarity=0.761  Sum_probs=61.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++|||++....    ......|+..|+|||++.  
T Consensus       129 qi~~al~~LH~~gi~H~dl~------------p~nili~~~~~~kL~dfg~~~~~~----~~~~~~~~~~y~aPE~~~~~  192 (313)
T cd06633         129 GALQGLAYLHSHNMIHRDIK------------AGNILLTEPGQVKLADFGSASKSS----PANSFVGTPYWMAPEVILAM  192 (313)
T ss_pred             HHHHHHHHHHHCCeecCCCC------------hhhEEECCCCCEEEeecCCCcccC----CCCCccccccccChhhcccc
Confidence            34677889999999999999            669999999999999999886432    223457889999999984  


Q ss_pred             -CCCCCccceEecC
Q psy3254         165 -EIGYDCVADMWSL  177 (177)
Q Consensus       165 -~~~~~~~~Diws~  177 (177)
                       ...++.++|||||
T Consensus       193 ~~~~~~~~sDv~sl  206 (313)
T cd06633         193 DEGQYDGKVDVWSL  206 (313)
T ss_pred             CCCCCCchhhHHHH
Confidence             3568889999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG2345|consensus

Probab=98.98  E-value=1.9e-10  Score=80.69  Aligned_cols=78  Identities=28%  Similarity=0.302  Sum_probs=59.9

Q ss_pred             hHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---------CCcccccccc
Q psy3254          88 DFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---------KRNTVIGTPF  156 (177)
Q Consensus        88 ~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---------~~~~~~g~~~  156 (177)
                      ..++++.+|..+  ..|+|+|            |.||++..++.+.+.|||.+....-...         .......|..
T Consensus       136 ic~gL~~lH~~~~~yAH~DiK------------P~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~p  203 (302)
T KOG2345|consen  136 ICRGLEALHEKEPPYAHRDIK------------PANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIP  203 (302)
T ss_pred             HHHHHHHHhccCCcccccCCC------------cceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCc
Confidence            367788999988  9999999            5599999999999999998875432111         0112346889


Q ss_pred             cccccccc---CCCCCccceEecC
Q psy3254         157 WMAPEVIQ---EIGYDCVADMWSL  177 (177)
Q Consensus       157 y~aPe~~~---~~~~~~~~Diws~  177 (177)
                      |.|||.+.   +...+.++|||||
T Consensus       204 yRAPELf~vk~~~ti~ertDIWSL  227 (302)
T KOG2345|consen  204 YRAPELFNVKSHCTITERTDIWSL  227 (302)
T ss_pred             ccCchheecccCcccccccchhhh
Confidence            99999885   3457889999996

>KOG0032|consensus

Probab=98.98  E-value=1.1e-09  Score=83.23  Aligned_cols=68  Identities=22%  Similarity=0.289  Sum_probs=58.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+......+|..+.. .....++.+|..++|||+++|..||.+|+++.++|+|||+...
T Consensus       231 LL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  231 LLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            6899999999998888888887754 2223246679999999999999999999999999999998864

>KOG0604|consensus

Probab=98.98  E-value=3e-10  Score=81.77  Aligned_cols=67  Identities=25%  Similarity=0.321  Sum_probs=52.4

Q ss_pred             CccCCCCCCCCC----HHHHHhhCcCCCCCCCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIH----PMRAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~----~~~~~~~i~~~~~~~~~--~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |+||.|||.+..    ......+|..+. ..|+  +|..+|..++|+|+++|..+|.+|.++++++.|||+...
T Consensus       256 lLCGyPPFYS~hg~aispgMk~rI~~gq-y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  256 LLCGYPPFYSNHGLAISPGMKRRIRTGQ-YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             hhcCCCcccccCCccCChhHHhHhhccC-ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence            689999998864    234445665553 3332  234569999999999999999999999999999999864

>KOG0583|consensus

Probab=98.97  E-value=7.8e-10  Score=83.86  Aligned_cols=64  Identities=27%  Similarity=0.445  Sum_probs=58.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCC-CHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVW-TPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~-s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|+.||.+.+...+..+|.++   .+..|..+ |+++++|+.+||+.||.+|+++.+++.|+|++.
T Consensus       216 ml~G~~PF~d~~~~~l~~ki~~~---~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  216 LLCGRLPFDDSNVPNLYRKIRKG---EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHhCCCCCCCccHHHHHHHHhcC---CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            68999999999999999998777   55557777 999999999999999999999999999999996

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.97  E-value=1.5e-10  Score=84.49  Aligned_cols=75  Identities=29%  Similarity=0.392  Sum_probs=58.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-------CeEEeeeecccccccccCCCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-------HAKLADFGVAGQLTDTMAKRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-------~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~a  159 (177)
                      ....++.++|..+++|++++            +.|++++..+       .++++|||++......    ....++..|+|
T Consensus       125 qi~~~l~~lH~~~iiH~dlk------------p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~a  188 (274)
T cd05076         125 QLASALSYLEDKNLVHGNVC------------AKNILLARLGLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIA  188 (274)
T ss_pred             HHHHHHHHHHcCCccCCCCC------------cccEEEeccCcccCccceeeecCCccccccccc----cccccCCcccC
Confidence            34678889999999999999            6699997543       4799999988643221    22357788999


Q ss_pred             cccccC-CCCCccceEecC
Q psy3254         160 PEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~-~~~~~~~Diws~  177 (177)
                      ||.+.+ ..++.++|||||
T Consensus       189 Pe~~~~~~~~~~~~Dv~sl  207 (274)
T cd05076         189 PECVPGGNSLSTAADKWSF  207 (274)
T ss_pred             chhhcCCCCCCcHHHHHHH
Confidence            998875 568899999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.97  E-value=1.8e-10  Score=83.10  Aligned_cols=77  Identities=32%  Similarity=0.618  Sum_probs=62.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..+++.++|..+++|++++            ++|++++. +.++++|||+++.............|+..|+|||.+.+..
T Consensus       115 l~~~l~~lH~~~i~h~~l~------------~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  181 (260)
T cd08222         115 LLLGVHYMHQRRILHRDLK------------AKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQG  181 (260)
T ss_pred             HHHHHHHHHHcCccccCCC------------hhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCC
Confidence            4677889999999999999            56999975 5699999999876544333334456888999999998878


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+|||
T Consensus       182 ~~~~~Dv~sl  191 (260)
T cd08222         182 YDSKSDIWSL  191 (260)
T ss_pred             CCchhhHHHH
Confidence            8899999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0610|consensus

Probab=98.96  E-value=7.2e-10  Score=82.73  Aligned_cols=72  Identities=25%  Similarity=0.345  Sum_probs=61.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HHhhhcCcccccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT----ASEMLNHEFIQVSPGGNI   73 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~----~~~~l~h~~~~~~~~~~~   73 (177)
                      |+.|..||.+.+..+.+.+|...+ +.+.....+|..++|||+++|++||.+|..    +.++.+||||+...|.-+
T Consensus       328 mLyG~TPFKG~~~~~Tl~NIv~~~-l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi  403 (459)
T KOG0610|consen  328 MLYGTTPFKGSNNKETLRNIVGQP-LKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI  403 (459)
T ss_pred             HHhCCCCcCCCCchhhHHHHhcCC-CcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence            688999999999999999997663 333323467999999999999999999998    999999999998777633

>KOG0582|consensus

Probab=98.96  E-value=5.9e-10  Score=83.92  Aligned_cols=71  Identities=30%  Similarity=0.686  Sum_probs=58.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCC-------CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFR-------EPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~-------~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      |++|..||....+.+.+....++.+|.+.       ....++..++.+|..||++||.+||++.++++|+||......
T Consensus       225 LA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~  302 (516)
T KOG0582|consen  225 LAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK  302 (516)
T ss_pred             HhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence            57999999999998888777788776321       123468899999999999999999999999999999876543

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.96  E-value=1.8e-10  Score=86.67  Aligned_cols=79  Identities=23%  Similarity=0.383  Sum_probs=60.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccC---CCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~  162 (177)
                      ...+++.++|..+++|++++            ++|++++. ++.++++|||+++.+.....   ......|+..|+|||+
T Consensus       122 qi~~aL~~LH~~givH~dik------------p~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  189 (342)
T cd07854         122 QLLRGLKYIHSANVLHRDLK------------PANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRL  189 (342)
T ss_pred             HHHHHHHHHHhCCcccCCCC------------HHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHH
Confidence            45788899999999999999            66999975 45689999999976533211   1122457889999998


Q ss_pred             ccC-CCCCccceEecC
Q psy3254         163 IQE-IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~-~~~~~~~Diws~  177 (177)
                      +.. ..++.++|||||
T Consensus       190 ~~~~~~~~~~~DiwSl  205 (342)
T cd07854         190 LLSPNNYTKAIDMWAA  205 (342)
T ss_pred             HhCccccCchhhHHHH
Confidence            754 568889999995

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0983|consensus

Probab=98.95  E-value=1.5e-09  Score=77.49  Aligned_cols=69  Identities=26%  Similarity=0.539  Sum_probs=60.0

Q ss_pred             CccCCCCCCCCC-HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIH-PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |+||..||.+.+ .-+.+.+|.+..+|.+..-..+|+.+++|+..||.+|+.+||...++|+|+|+....
T Consensus       287 LaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  287 LATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             hhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence            689999999965 457888888888888864456999999999999999999999999999999998643

>KOG0599|consensus

Probab=98.95  E-value=2.9e-10  Score=81.03  Aligned_cols=67  Identities=28%  Similarity=0.301  Sum_probs=55.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |+.|.|||.-....-.+.+|+.+.+ ...++|..+|...+|||++||+.||.+|.|+.|.|.|||+..
T Consensus       221 LLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  221 LLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             HHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            4679999998877777788877653 233335677999999999999999999999999999999953

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.94  E-value=3.1e-10  Score=81.35  Aligned_cols=78  Identities=45%  Similarity=0.743  Sum_probs=64.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||.+........  ......++..|++||.+..
T Consensus       110 l~~~l~~lh~~~~~h~dl~------------p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  177 (260)
T cd06606         110 ILEGLAYLHSNGIVHRDIK------------GANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG  177 (260)
T ss_pred             HHHHHHHHHHCCccccCCC------------HHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcC
Confidence            4677889999999999999            6699999999999999999987654322  1334568889999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       178 ~~~~~~~Dv~sl  189 (260)
T cd06606         178 EEYGRAADIWSL  189 (260)
T ss_pred             CCCCchhhHHHH
Confidence            778999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0576|consensus

Probab=98.93  E-value=5.9e-10  Score=87.65  Aligned_cols=170  Identities=35%  Similarity=0.558  Sum_probs=99.8

Q ss_pred             CCCCCCCCHHHHHhhCcC--CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCCCC--------
Q psy3254           5 KPPYGDIHPMRAIFMIPT--KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIP--------   74 (177)
Q Consensus         5 ~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~~~--------   74 (177)
                      .||-.+..+...++..-+  .++|.+.++..||+.+-+|++.+|.++|++||+++.+|.|+|+.........        
T Consensus       212 qpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n  291 (829)
T KOG0576|consen  212 QPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVN  291 (829)
T ss_pred             CCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHcc
Confidence            678888877766654433  3578888888999999999999999999999999999999998643211100        


Q ss_pred             -----CCCCCCCCCCCcchHHHHhhh----------chhhHHHHHhhhchHHHHH---HH------Hhhc-ceEeCCCCC
Q psy3254          75 -----PGPPGAPSGGGFCDFEFLKFL----------SYDDLQHRMANLDCEMERE---IE------QLRR-NILLNTEGH  129 (177)
Q Consensus        75 -----~~~~~~~~~~~~~~~~~l~~l----------~~~~~~~~~~~~~~~~~~~---i~------~l~~-nil~~~~~~  129 (177)
                           ........+..+.+. ..++.          ...++.-...+....-..+   +.      +... |++ ..++.
T Consensus       292 ~P~~~v~~~~d~~~E~~~~i-~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l-~s~~~  369 (829)
T KOG0576|consen  292 NPNPVVRYLEDYDGEDYLWI-PMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRDNIL-GSEEE  369 (829)
T ss_pred             CCCCcccccccCCcccccch-hhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCccccc-ccccc
Confidence                 000000011111000 00000          0000000000000000000   00      0111 333 33467


Q ss_pred             eEEeeeecccccccccCCCccccccccccccccccCCCCCccceEecC
Q psy3254         130 AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       130 ~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      .+..+|++...+.... ...+..+++.|+|||+...+.+....|+||.
T Consensus       370 ~~~~~~~v~~~L~~~~-~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~  416 (829)
T KOG0576|consen  370 VKLLDFAVPPQLTRTM-KPRTAIGTPEPLAPEVIQENTIDGCPDSGSL  416 (829)
T ss_pred             cccccccCCcccCccc-ccccCCCCCCCCCchhhcccccccCCCccCC
Confidence            8889999887766543 3455779999999999998888888899874

>KOG2052|consensus

Probab=98.93  E-value=3e-10  Score=85.40  Aligned_cols=66  Identities=32%  Similarity=0.524  Sum_probs=49.3

Q ss_pred             HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc----cCCCccccccccccccccccCCC----CC--
Q psy3254         100 LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT----MAKRNTVIGTPFWMAPEVIQEIG----YD--  169 (177)
Q Consensus       100 ~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~g~~~y~aPe~~~~~~----~~--  169 (177)
                      +.|||+|            ..||++.+++.+.++|+|||......    ....+..+||.+|||||++....    |.  
T Consensus       337 IAHRDlK------------SKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesy  404 (513)
T KOG2052|consen  337 IAHRDLK------------SKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESY  404 (513)
T ss_pred             hhccccc------------cccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhh
Confidence            5677776            55999999999999999999765432    11245689999999999996421    11  


Q ss_pred             ccceEecC
Q psy3254         170 CVADMWSL  177 (177)
Q Consensus       170 ~~~Diws~  177 (177)
                      ..+|||||
T Consensus       405 k~ADIYaf  412 (513)
T KOG2052|consen  405 KRADIYAF  412 (513)
T ss_pred             hHHHHHHH
Confidence            35799986

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=1.6e-09  Score=78.50  Aligned_cols=65  Identities=52%  Similarity=1.110  Sum_probs=54.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|.+||.+.+....+.++.....+.+..+..++.+++++|.+||..||.+||++.+++.|||+
T Consensus       211 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         211 LADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            46899999887777777777666555555455688999999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.89  E-value=2.7e-09  Score=78.29  Aligned_cols=66  Identities=39%  Similarity=0.968  Sum_probs=55.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |++|++||...+....+..+.....+.+..+..++..++++|.+|+..+|.+||++.+++.|||++
T Consensus       226 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         226 LGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            578999999888777777666665555555666889999999999999999999999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.88  E-value=4.2e-10  Score=84.12  Aligned_cols=79  Identities=22%  Similarity=0.409  Sum_probs=58.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-------Cccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-------RNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~g~~~y~a  159 (177)
                      ....++.++|..+++|++++            ++|++++.++.++++||+.+.........       .....++..|+|
T Consensus       109 qi~~aL~~lH~~~ivHrDlk------------p~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (328)
T cd08226         109 GALRGLNYLHQNGYIHRNIK------------ASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLS  176 (328)
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccC
Confidence            34678889999999999999            66999999999999999865432211111       011234567999


Q ss_pred             cccccC--CCCCccceEecC
Q psy3254         160 PEVIQE--IGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~--~~~~~~~Diws~  177 (177)
                      ||++.+  ..++.++|||||
T Consensus       177 PE~~~~~~~~~~~~~Diwsl  196 (328)
T cd08226         177 PELLRQDLYGYNVKSDIYSV  196 (328)
T ss_pred             hhhhcCCCCCCCchhhHHHH
Confidence            999976  347889999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0580|consensus

Probab=98.88  E-value=1.2e-09  Score=76.23  Aligned_cols=64  Identities=28%  Similarity=0.434  Sum_probs=57.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      ++.|.|||++.+..++..+|.+-   .+..|..+|.+++|+|.+||+.+|.+|....+.+.|||+..
T Consensus       215 flvg~ppFes~~~~etYkrI~k~---~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  215 FLVGLPPFESQSHSETYKRIRKV---DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HHhcCCchhhhhhHHHHHHHHHc---cccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence            46799999999988999888766   55557889999999999999999999999999999999874

>KOG0587|consensus

Probab=98.87  E-value=2.1e-09  Score=86.67  Aligned_cols=67  Identities=52%  Similarity=1.083  Sum_probs=64.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |+.|.||+.+..+...+++|.++++|.+..|..||.++-|||..||.+|..+||+..+++.|||+..
T Consensus       221 ladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  221 MAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             hcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            5779999999999999999999999999999999999999999999999999999999999999983

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.87  E-value=1.3e-09  Score=85.66  Aligned_cols=66  Identities=23%  Similarity=0.285  Sum_probs=50.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-CccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++.+...... .....+++.|+|||.+..
T Consensus       318 l~~aL~~lH~~~ivHrDLK------------p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        318 VLTGLRKLHRIGIVHRDIK------------PENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM  384 (507)
T ss_pred             HHHHHHHHHHCCeecCCCc------------hHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence            3567889999999999999            66999999999999999999765432111 112234789999998853

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.86  E-value=6.7e-10  Score=78.73  Aligned_cols=77  Identities=44%  Similarity=0.698  Sum_probs=63.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.|++++.++.++++|||.+....... ......++..|++||.+....
T Consensus        96 l~~~l~~lh~~~i~h~~i~------------~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~  162 (244)
T smart00220       96 ILSALEYLHSNGIIHRDLK------------PENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEVLLGKG  162 (244)
T ss_pred             HHHHHHHHHHcCeecCCcC------------HHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHHHccCC
Confidence            3577789999999999998            669999999999999999998655431 233456888999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|+||+
T Consensus       163 ~~~~~Di~sl  172 (244)
T smart00220      163 YGKAVDVWSL  172 (244)
T ss_pred             CCchhhHHHH
Confidence            8999999985

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=4e-09  Score=76.96  Aligned_cols=68  Identities=38%  Similarity=0.869  Sum_probs=58.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+....+.++.....+.+..+..++.++.++|.+||..+|.+||++.++++|+|+...
T Consensus       201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         201 LAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            57899999998877777777666666665567789999999999999999999999999999999754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0590|consensus

Probab=98.86  E-value=1.5e-09  Score=86.99  Aligned_cols=77  Identities=30%  Similarity=0.511  Sum_probs=63.3

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccccccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe~~~  164 (177)
                      ..+++|+|..++.|++++            ++|+++..+|.++++|||.+....-+..    .....+|+..|+|||++.
T Consensus       430 ~~Gv~y~h~~GiahrdlK------------~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~  497 (601)
T KOG0590|consen  430 LRGVKYLHSMGLAHRDLK------------LENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLT  497 (601)
T ss_pred             HHHHHHHHhcCceeccCc------------cccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCccccc
Confidence            456679999999999999            5599999999999999999876543322    234578999999999999


Q ss_pred             CCCCCcc-ceEecC
Q psy3254         165 EIGYDCV-ADMWSL  177 (177)
Q Consensus       165 ~~~~~~~-~Diws~  177 (177)
                      +..|++. +||||.
T Consensus       498 ~~~ydpr~vDiwS~  511 (601)
T KOG0590|consen  498 GKEYDPRAVDVWSC  511 (601)
T ss_pred             ccccCcchhhhhhc
Confidence            9999874 799984

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.84  E-value=7.4e-09  Score=75.67  Aligned_cols=68  Identities=38%  Similarity=0.836  Sum_probs=56.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+...++.....+....+..++.+++++|.+||..||.+||++.++++|+|+...
T Consensus       201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         201 MAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence            57899999988877777666655444444466789999999999999999999999999999998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG4279|consensus

Probab=98.82  E-value=6e-09  Score=82.93  Aligned_cols=66  Identities=32%  Similarity=0.705  Sum_probs=55.9

Q ss_pred             CccCCCCCCCC-CHHHHHhhCcC-CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDI-HPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~-~~~~~~~~i~~-~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |+||+|||... ++...+++.-. +..|++  |..+|.+++.||.+|+..||.+||++.++|..||++..
T Consensus       771 MATGrPPF~ElgspqAAMFkVGmyKvHP~i--Peelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  771 MATGRPPFVELGSPQAAMFKVGMYKVHPPI--PEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             eccCCCCeeecCChhHhhhhhcceecCCCC--cHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            89999999776 67777887753 233444  67889999999999999999999999999999999875

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.82  E-value=6e-09  Score=74.84  Aligned_cols=65  Identities=69%  Similarity=1.362  Sum_probs=53.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|++||...+.......+.....+.+..+..++.++.+++.+|+..||.+||++.+++.|+|+
T Consensus       192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         192 MAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            57899999988776666655555445555556678999999999999999999999999999996

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0606|consensus

Probab=98.81  E-value=5.1e-10  Score=91.91  Aligned_cols=76  Identities=34%  Similarity=0.595  Sum_probs=63.2

Q ss_pred             HHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---------------CCcccccc
Q psy3254          90 EFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---------------KRNTVIGT  154 (177)
Q Consensus        90 ~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~g~  154 (177)
                      -+++|+|..+++|++++            +.|+++..-|++|++|||+++.......               .....+||
T Consensus       154 la~Eylh~ygivhrdlk------------pdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgT  221 (1205)
T KOG0606|consen  154 LAVEYLHSYGIVHRDLK------------PDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGT  221 (1205)
T ss_pred             HHhHhhccCCeecCCCC------------CCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCC
Confidence            67889999999999999            5599999999999999999875311000               12346899


Q ss_pred             ccccccccccCCCCCccceEecC
Q psy3254         155 PFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       155 ~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      +.|.|||++.-.+|++.+|+|++
T Consensus       222 PeyiaPeVilrqgygkpvdwwam  244 (1205)
T KOG0606|consen  222 PEYIAPEVILRQGYGKPVDWWAM  244 (1205)
T ss_pred             ccccChhhhhhhccCCCccHHHH
Confidence            99999999999999999999984

>KOG1033|consensus

Probab=98.81  E-value=3.6e-10  Score=86.56  Aligned_cols=68  Identities=28%  Similarity=0.508  Sum_probs=56.7

Q ss_pred             hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc------cCCCccccccccccccccccCCCCCcc
Q psy3254          98 DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT------MAKRNTVIGTPFWMAPEVIQEIGYDCV  171 (177)
Q Consensus        98 ~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~g~~~y~aPe~~~~~~~~~~  171 (177)
                      ++++|++++            +.||....+..++++|||+.......      .+..+..+||.+||+||.+.+..|+.+
T Consensus       375 k~~ihrdlk------------p~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~k  442 (516)
T KOG1033|consen  375 KGLIHRDLK------------PSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEK  442 (516)
T ss_pred             ccchhhhcc------------ccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhh
Confidence            677888888            66999998899999999998765432      223455789999999999999999999


Q ss_pred             ceEecC
Q psy3254         172 ADMWSL  177 (177)
Q Consensus       172 ~Diws~  177 (177)
                      +|||||
T Consensus       443 vdIyaL  448 (516)
T KOG1033|consen  443 VDIYAL  448 (516)
T ss_pred             cchhhH
Confidence            999985

>KOG0616|consensus

Probab=98.80  E-value=2.7e-09  Score=76.74  Aligned_cols=70  Identities=20%  Similarity=0.319  Sum_probs=60.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVSPGGNI   73 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~~~~~~   73 (177)
                      |++|.|||.+.++.....+|..+   .+..|..+|++++|||+++|++|-.+|.     ...++..|+|+....+..+
T Consensus       234 MlaG~pPF~~~~~~~iY~KI~~~---~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i  308 (355)
T KOG0616|consen  234 MLAGYPPFYDDNPIQIYEKILEG---KVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAI  308 (355)
T ss_pred             HHcCCCCCcCCChHHHHHHHHhC---cccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHH
Confidence            78999999999999999999988   6666888999999999999999999993     4667999999987655443

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.80  E-value=7.3e-09  Score=74.82  Aligned_cols=65  Identities=34%  Similarity=0.728  Sum_probs=52.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCC---CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREP---DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~---~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|.+||...+....+.++....++.+...   ..++..+++++.+|+..||.+||++.+++.|||+
T Consensus       200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         200 LATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            5789999998877766666655554444332   2568999999999999999999999999999996

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.80  E-value=7.1e-09  Score=75.71  Aligned_cols=64  Identities=52%  Similarity=1.083  Sum_probs=50.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|.+||.+..+......+.....+... ...++.++.+||.+||..||.+||++.+++.|+|+
T Consensus       219 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         219 MAEGAPPLCDMHPMRALFLIPRNPPPKLK-SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHhCCCCccccCHHhhhhhHhhCCCCCCc-ccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            57899999887766665555444333332 34678999999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.79  E-value=1.3e-08  Score=74.69  Aligned_cols=69  Identities=36%  Similarity=0.770  Sum_probs=56.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+..+.+.++.....+....+..++.++.++|.+||..+|.+||++.+++.|+|+....
T Consensus       208 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  276 (292)
T cd06644         208 MAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT  276 (292)
T ss_pred             HhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            578999999887776666665554444444667899999999999999999999999999999987543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.78  E-value=1.6e-09  Score=91.69  Aligned_cols=74  Identities=15%  Similarity=0.238  Sum_probs=57.7

Q ss_pred             chHHHHhhhc---hhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLS---YDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~---~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.|+|   ..+++|++++            ++|++++.++..++. ||.......    .....||..|+|||++
T Consensus       788 ~ia~~L~yLH~~~~~~iiH~dlk------------p~Nil~~~~~~~~~~-~~~~~~~~~----~~~~~~t~~y~aPE~~  850 (968)
T PLN00113        788 GIAKALRFLHCRCSPAVVVGNLS------------PEKIIIDGKDEPHLR-LSLPGLLCT----DTKCFISSAYVAPETR  850 (968)
T ss_pred             HHHHHHHHhccCCCCCeecCCCC------------HHhEEECCCCceEEE-ecccccccc----CCCccccccccCcccc
Confidence            3467888999   5689999999            669999988877765 665543221    1234688999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++|||||
T Consensus       851 ~~~~~~~~sDv~S~  864 (968)
T PLN00113        851 ETKDITEKSDIYGF  864 (968)
T ss_pred             cCCCCCcccchhhH
Confidence            98889999999996

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.76  E-value=1.3e-08  Score=75.94  Aligned_cols=66  Identities=24%  Similarity=0.415  Sum_probs=54.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+.......+...   ....|..++.++++||.+||..||.+|+     ++.+++.|+|+....
T Consensus       188 lltg~~Pf~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~  258 (323)
T cd05571         188 MMCGRLPFYNQDHEKLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN  258 (323)
T ss_pred             hhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            68999999998877766666544   2233667899999999999999999999     899999999997643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0598|consensus

Probab=98.75  E-value=7e-09  Score=76.33  Aligned_cols=72  Identities=24%  Similarity=0.310  Sum_probs=61.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC----CHHhhhcCcccccCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA----TASEMLNHEFIQVSPGGNIP   74 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~----~~~~~l~h~~~~~~~~~~~~   74 (177)
                      |++|.|||.+.+......+|.++..+..  |..+|.+++|+++++|.+||.+|.    .+.++-.|||+....+..+.
T Consensus       218 ML~G~pPF~~~~~~~~~~~I~~~k~~~~--p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~  293 (357)
T KOG0598|consen  218 MLTGKPPFYAEDVKKMYDKILKGKLPLP--PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLL  293 (357)
T ss_pred             HhhCCCCCcCccHHHHHHHHhcCcCCCC--CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHH
Confidence            7999999999999999999988853333  455899999999999999999995    68899999999987765444

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.74  E-value=1.3e-08  Score=75.08  Aligned_cols=69  Identities=39%  Similarity=0.852  Sum_probs=55.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+....+..+.....+.+..+..+++.++++|.+||..||.+||++.+++.|+|++...
T Consensus       208 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         208 MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence            578999999887766655554444444544667899999999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.74  E-value=1.8e-08  Score=73.27  Aligned_cols=68  Identities=47%  Similarity=0.967  Sum_probs=54.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+.......+.....+.+.. ..++..+.+++.+||..+|.+||++.+++.|+|+....
T Consensus       191 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~  258 (274)
T cd06609         191 LAKGEPPLSDLHPMRVLFLIPKNNPPSLEG-NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAK  258 (274)
T ss_pred             HHhCCCCcccCchHHHHHHhhhcCCCCCcc-cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCC
Confidence            578999999888777666666554444421 22789999999999999999999999999999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.73  E-value=1.4e-08  Score=74.75  Aligned_cols=66  Identities=23%  Similarity=0.295  Sum_probs=54.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+...++..+.   ...|..++..++++|++||..||.+|++     +++++.|+|+....
T Consensus       191 l~~g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~  261 (291)
T cd05612         191 MLVGYPPFFDDNPFGIYEKILAGK---LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD  261 (291)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCC---cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence            578999999988877777776552   2235667999999999999999999995     99999999997543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.73  E-value=2.3e-08  Score=73.34  Aligned_cols=69  Identities=36%  Similarity=0.694  Sum_probs=56.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+....+.++....++....+...+..+.+++.+||..+|.+||++.+++.|+|+....
T Consensus       208 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         208 MVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             HHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence            578999999888777666665554444443445789999999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.72  E-value=2.1e-08  Score=72.54  Aligned_cols=63  Identities=35%  Similarity=0.639  Sum_probs=51.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|..||.+.+....+.++.....+.+  +..++.+++++|.+||..||.+||++.+++.|+|+
T Consensus       205 l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         205 MLTGKHPFPDCTQLQAIFKIGENASPEI--PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HhhCCCCCCCccHHHHHHHHhccCCCcC--CcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            4789999998776666665544433333  55678999999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.72  E-value=1.5e-08  Score=75.67  Aligned_cols=66  Identities=20%  Similarity=0.285  Sum_probs=54.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH------HhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA------SEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~------~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+.+..+.....   ..|..++.+++++|++||..||.+|+++      ++++.|+|+....
T Consensus       189 l~~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~  260 (320)
T cd05590         189 MLCGHAPFEAENEDDLFEAILNDEV---VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD  260 (320)
T ss_pred             HhhCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence            5789999999988887777765522   2256689999999999999999999998      8999999997543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.72  E-value=1.6e-08  Score=74.67  Aligned_cols=69  Identities=36%  Similarity=0.811  Sum_probs=54.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+....+..+.....+....+..++..+++||.+||..+|.+||++.+++.|+|++...
T Consensus       208 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  276 (297)
T cd06656         208 MVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK  276 (297)
T ss_pred             HHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence            468999998877655555444444444444567889999999999999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.72  E-value=2.4e-08  Score=72.18  Aligned_cols=65  Identities=37%  Similarity=0.703  Sum_probs=49.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|.+||...+.......+..........+..++.+++++|.+||..+|.+||++.+++.|+|+
T Consensus       201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         201 MATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            57899999887665555444433211112256689999999999999999999999999999996

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.71  E-value=1.1e-08  Score=74.88  Aligned_cols=32  Identities=25%  Similarity=0.400  Sum_probs=30.7

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      +|.+++|||++||..||.+|+++++++.|||+
T Consensus       256 ~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         256 LSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            68889999999999999999999999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.71  E-value=1.7e-08  Score=75.03  Aligned_cols=65  Identities=28%  Similarity=0.393  Sum_probs=54.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA---TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~---~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+...++...   ....|..++.+++++|.+||..||.+|+   ++.+++.|||+...
T Consensus       186 l~tg~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         186 MLTGLPPFYDENVNEMYRKILQE---PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHhCCCCcCCCCHHHHHHHHHcC---CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            57899999998887777776655   2333667899999999999999999997   58999999999754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.71  E-value=3.4e-08  Score=72.21  Aligned_cols=65  Identities=49%  Similarity=1.128  Sum_probs=52.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|.+||.+.+....+.++.....+....+..++..+++++.+||..||.+||++.+++.|+|+
T Consensus       222 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         222 LGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            57899999888776666555544444444455678999999999999999999999999999986

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.71  E-value=2.1e-08  Score=75.16  Aligned_cols=65  Identities=22%  Similarity=0.344  Sum_probs=54.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+...++..+.   +..|..++..+++||.+||..||.+|++     +++++.|||+...
T Consensus       208 lltg~~pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        208 FIAGYPPFFDDTPFRIYEKILAGR---LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             HHcCCCCCCCCCHHHHHHHHhcCC---cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            578999999988877777776552   2335668999999999999999999986     7999999999753

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.71  E-value=2.1e-08  Score=73.63  Aligned_cols=65  Identities=23%  Similarity=0.401  Sum_probs=47.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC---CC------------------CC------CCCCCCCCHHHHHHHHHhcccCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK---PP------------------PS------FREPDVWTPEFIDFVSRCLVKNPEER   53 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~---~~------------------~~------~~~~~~~s~~~~~~i~~~l~~~p~~R   53 (177)
                      |++|++||.+.+..+.+..+...   ++                  +.      .......+.+++|||++||..||.+|
T Consensus       197 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R  276 (288)
T cd07871         197 MATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSR  276 (288)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccC
Confidence            57899999988766555433210   00                  00      00012468899999999999999999


Q ss_pred             CCHHhhhcCccc
Q psy3254          54 ATASEMLNHEFI   65 (177)
Q Consensus        54 ~~~~~~l~h~~~   65 (177)
                      +|+.++++|||+
T Consensus       277 ~t~~~~l~hp~f  288 (288)
T cd07871         277 ISAEAALRHSYF  288 (288)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999996

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.70  E-value=2.7e-08  Score=73.33  Aligned_cols=68  Identities=38%  Similarity=0.839  Sum_probs=53.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+.......+.....+....+..++..++++|.+||..+|.+||++.+++.|+|+...
T Consensus       209 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             HHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence            57899999888765554444443333444456688999999999999999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.70  E-value=2.3e-08  Score=71.88  Aligned_cols=63  Identities=19%  Similarity=0.353  Sum_probs=53.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|..||...+..+....+..+..+..  +..++.+++++|.+|+..+|.+||++.+++.|+|+
T Consensus       194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         194 MCTLKHAFEAGNMKNLVLKIIRGSYPPV--SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHcCCCCccCCCHHHHHHHHhcCCCCCC--cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            4689999998887777777666544333  56789999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.70  E-value=1.1e-08  Score=83.48  Aligned_cols=78  Identities=23%  Similarity=0.259  Sum_probs=59.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++|+|||+++............++|+.|++||.....
T Consensus       112 qil~aL~yLH~~gIiHrDLK------------P~NILl~~~g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~  179 (669)
T cd05610         112 EVALALDYLHRHGIIHRDLK------------PDNMLISNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYSR  179 (669)
T ss_pred             HHHHHHHHHHhCCEEeCCcc------------HHHEEEcCCCCEEEEeCCCCccccCCcccccccccCccccCccccccC
Confidence            34678899999999999999            669999999999999999998765443344456799999999876432


Q ss_pred             C-CCccceEec
Q psy3254         167 G-YDCVADMWS  176 (177)
Q Consensus       167 ~-~~~~~Diws  176 (177)
                      . -...+++|+
T Consensus       180 ~~~~~~s~~~s  190 (669)
T cd05610         180 TPGQVLSLISS  190 (669)
T ss_pred             CCCceeeeeee
Confidence            2 223345555

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.70  E-value=2.9e-08  Score=71.35  Aligned_cols=63  Identities=24%  Similarity=0.452  Sum_probs=51.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|+.||.+.+.......+..+..+..  +...+.++.+++.+|+..+|.+||++.+++.|||+
T Consensus       195 l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         195 MATLKHAFNAKDMNSLVYRIIEGKLPPM--PKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHcCCCCCCCCCHHHHHHHHHhcCCCCC--ccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            4789999998877666666655533333  45688999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.70  E-value=2.5e-08  Score=74.37  Aligned_cols=65  Identities=20%  Similarity=0.304  Sum_probs=54.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-------CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-------TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-------~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+.+.++....   ...|..++.++++++.+||..||.+|+       ++++++.|+|+...
T Consensus       189 l~tg~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         189 MMAGQPPFEADNEDDLFESILHDD---VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence            578999999999888887776653   222556799999999999999999999       89999999999653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.69  E-value=2.8e-08  Score=72.07  Aligned_cols=64  Identities=47%  Similarity=1.028  Sum_probs=49.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|.+||.+.........+......... +..++.++++|+.+||..+|.+||++.+++.|||+
T Consensus       209 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         209 MAEGAPPLCDMHPMRALFLIPRNPAPRLK-SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHhCCCCccccCHHHHHHHHhcCCCCCCC-CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            57899999887666555544433222222 34578999999999999999999999999999996

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.68  E-value=3.1e-08  Score=71.34  Aligned_cols=63  Identities=17%  Similarity=0.343  Sum_probs=51.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|..||...+.......+..+..+.+  +..++..+.+++.+||..+|.+||++.++++|||+
T Consensus       203 l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         203 LCALSPPFTARNQLQLASKIKEGKFRRI--PYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHCCCcccCcCHHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            5689999998876666666655543343  56789999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.68  E-value=1.3e-08  Score=76.91  Aligned_cols=65  Identities=20%  Similarity=0.263  Sum_probs=52.3

Q ss_pred             hHHHHhhhchhhHHHHHh-hhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--------Ccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMA-NLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--------RNTVIGTPFWM  158 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~-~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------~~~~~g~~~y~  158 (177)
                      ..+++.++|..+++|+|+ |            |+|++++.++.++++|||+++.+......        ....+++..|+
T Consensus       120 i~~aL~~lH~~gIiHrDL~K------------P~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~  187 (365)
T PRK09188        120 AHRALRDLHRAGITHNDLAK------------PQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTY  187 (365)
T ss_pred             HHHHHHHHHHCCCeeCCCCC------------cceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccC
Confidence            468888999999999999 8            66999998899999999999866433211        12456888899


Q ss_pred             cccccc
Q psy3254         159 APEVIQ  164 (177)
Q Consensus       159 aPe~~~  164 (177)
                      |||.+.
T Consensus       188 ~pe~~~  193 (365)
T PRK09188        188 APDALT  193 (365)
T ss_pred             CcccCC
Confidence            999985

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.67  E-value=3.2e-08  Score=74.54  Aligned_cols=66  Identities=15%  Similarity=0.188  Sum_probs=54.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+......++..+.   ...|..++.+++++|++||..||.+|+     ++++++.|||+....
T Consensus       221 ll~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~  291 (340)
T PTZ00426        221 ILVGCPPFYANEPLLIYQKILEGI---IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID  291 (340)
T ss_pred             HhcCCCCCCCCCHHHHHHHHhcCC---CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            689999999988877777776552   223567899999999999999999995     899999999998643

>KOG0605|consensus

Probab=98.67  E-value=1.8e-08  Score=77.53  Aligned_cols=74  Identities=26%  Similarity=0.335  Sum_probs=60.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHhhhcCcccccCCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEERA---TASEMLNHEFIQVSPGGNIPP   75 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~---~~~~~l~h~~~~~~~~~~~~~   75 (177)
                      |+.|.|||.+.++.+...+|.+-. ...++.-...|.+++|||.+||. ||.+|.   +++|+..||||....+..+..
T Consensus       381 mLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~  458 (550)
T KOG0605|consen  381 MLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLRE  458 (550)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhc
Confidence            688999999999999999998653 23332224569999999999999 999996   599999999999887776543

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.67  E-value=3.7e-08  Score=73.56  Aligned_cols=65  Identities=29%  Similarity=0.463  Sum_probs=55.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+....+..+..+   ....|..++++++++|.+||..+|.+|+     ++++++.|+|+...
T Consensus       193 ll~G~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         193 MLTGAPPFTAENRKKTIDKILKG---KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            67999999998887777777655   2333667899999999999999999999     89999999999754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.66  E-value=1.6e-08  Score=78.71  Aligned_cols=70  Identities=23%  Similarity=0.314  Sum_probs=50.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CC-----------------CCC-------CCCCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PP-----------------PSF-------REPDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~-----------------~~~-------~~~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|.+||.+.+..+.+.++...  .+                 +..       ..|...+.++++||.+||..||.+|+
T Consensus       264 lltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~  343 (440)
T PTZ00036        264 MILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRL  343 (440)
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCc
Confidence            57999999998766555443310  00                 000       01234678999999999999999999


Q ss_pred             CHHhhhcCcccccCCC
Q psy3254          55 TASEMLNHEFIQVSPG   70 (177)
Q Consensus        55 ~~~~~l~h~~~~~~~~   70 (177)
                      ++.+++.|||+.....
T Consensus       344 ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        344 NPIEALADPFFDDLRD  359 (440)
T ss_pred             CHHHHhCChhHHhhhc
Confidence            9999999999976543

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.66  E-value=2.7e-08  Score=74.11  Aligned_cols=65  Identities=23%  Similarity=0.332  Sum_probs=53.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-----HhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA-----SEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~-----~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+.......+....   ...|..++.+++++|++||..||.+|+++     .+++.|+|+...
T Consensus       189 l~~G~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         189 MLAGQSPFEGDDEDELFQSILEDE---VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             HhhCCCCCCCCCHHHHHHHHHcCC---CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            578999999888777776665542   22256789999999999999999999999     999999999764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0577|consensus

Probab=98.66  E-value=3.1e-08  Score=77.61  Aligned_cols=70  Identities=34%  Similarity=0.689  Sum_probs=63.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      |+..+||+...|....++.|..+.+|.++ .+.||..++.||..||.+-|..|||.++++.|+|+......
T Consensus       218 LAERkPPlFnMNAMSALYHIAQNesPtLq-s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~  287 (948)
T KOG0577|consen  218 LAERKPPLFNMNAMSALYHIAQNESPTLQ-SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPP  287 (948)
T ss_pred             hhhcCCCccCchHHHHHHHHHhcCCCCCC-CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCc
Confidence            45679999999999999999999999997 57899999999999999999999999999999999865433

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.65  E-value=2.7e-08  Score=73.28  Aligned_cols=69  Identities=38%  Similarity=0.823  Sum_probs=54.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||...+....+..+.....+.+..+..++..++++|.+|+..+|.+||++.+++.|+|++...
T Consensus       208 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         208 MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             HHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence            468999998877666555444444445544556789999999999999999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.65  E-value=4.5e-08  Score=70.28  Aligned_cols=63  Identities=17%  Similarity=0.383  Sum_probs=52.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|+.||...+..+...++..+..+.+  +..++.++++++.+|+..+|.+||++.+++.|+|+
T Consensus       194 l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         194 CCTGKHPFDANNQGALILKIIRGVFPPV--SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCC--ccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            5789999998887777777666544444  34678999999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.65  E-value=4.4e-08  Score=70.40  Aligned_cols=63  Identities=13%  Similarity=0.281  Sum_probs=50.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|.+||...+..+....+........  +..++.+++++|.+|+..+|.+||++.+++.|+|+
T Consensus       195 l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         195 LCTLKHPFEGNNLHQLVLKICQGYFAPI--SPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHhCCCCCCCccHHHHHHHHhcccCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            4689999998877766666555432222  35678999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0668|consensus

Probab=98.64  E-value=6.1e-09  Score=72.69  Aligned_cols=77  Identities=25%  Similarity=0.475  Sum_probs=63.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-CCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      .+.+++|+|..++.|++.+            |.|+.++.. ..+++.|+|+|...... ...+..+.+.+|--||.+.. 
T Consensus       141 lLkALdyCHS~GImHRDVK------------PhNvmIdh~~rkLrlIDWGLAEFYHp~-~eYnVRVASRyfKGPELLVdy  207 (338)
T KOG0668|consen  141 LLKALDYCHSMGIMHRDVK------------PHNVMIDHELRKLRLIDWGLAEFYHPG-KEYNVRVASRYFKGPELLVDY  207 (338)
T ss_pred             HHHHHhHHHhcCcccccCC------------cceeeechhhceeeeeecchHhhcCCC-ceeeeeeehhhcCCchheeec
Confidence            3678889999999999999            559999864 46999999999876543 34455678888999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.+-|+|||
T Consensus       208 ~~YDYSLD~WS~  219 (338)
T KOG0668|consen  208 QMYDYSLDMWSL  219 (338)
T ss_pred             hhccccHHHHHH
Confidence            678899999996

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.64  E-value=5e-08  Score=73.09  Aligned_cols=65  Identities=22%  Similarity=0.384  Sum_probs=53.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+....+....   ...|..++.++++||.+||..||.+|+     ++.+++.|+|+...
T Consensus       188 lltG~~Pf~~~~~~~~~~~~~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         188 MMCGRLPFYNQDHEKLFELILMED---IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             HhhCCCCCCCCCHHHHHHHhccCC---ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            578999999888777666665442   223667899999999999999999997     89999999999753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.63  E-value=1.1e-08  Score=71.80  Aligned_cols=78  Identities=44%  Similarity=0.688  Sum_probs=61.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccc-cC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVI-QE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~-~~  165 (177)
                      ....+.++|..++.|++++            +.|++++.++.++++|||.+....... .......++..|++||.+ ..
T Consensus       107 l~~~l~~lh~~~i~h~di~------------~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  174 (225)
T smart00221      107 ILEALEYLHSLGIVHRDLK------------PENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGG  174 (225)
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCC
Confidence            3567778999999999998            569999999999999999998764431 122345678889999998 56


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|+|||
T Consensus       175 ~~~~~~~Dv~~l  186 (225)
T smart00221      175 KGYGEAVDIWSL  186 (225)
T ss_pred             CCCCchhhHHHH
Confidence            678889999985

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.63  E-value=6.2e-08  Score=72.60  Aligned_cols=38  Identities=50%  Similarity=0.934  Sum_probs=34.3

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      .++.++++||.+||..||.+||++.+++.|+|+.....
T Consensus       272 ~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~  309 (331)
T cd06649         272 VFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEV  309 (331)
T ss_pred             cccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhccc
Confidence            46889999999999999999999999999999986443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.63  E-value=5.6e-08  Score=71.98  Aligned_cols=67  Identities=33%  Similarity=0.716  Sum_probs=55.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+.......+.....+.+. +..++..++++|.+||..+|.+||++.+++.|+|+...
T Consensus       207 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         207 LAERKPPLFNMNAMSALYHIAQNDSPTLS-SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             HHcCCCCCCCccHHHHHHHHhcCCCCCCC-chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence            57899999988877777666655444443 34578999999999999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.63  E-value=5e-08  Score=69.59  Aligned_cols=64  Identities=53%  Similarity=1.117  Sum_probs=50.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF   64 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~   64 (177)
                      |++|++||...+....+..+.....+.+..+..++..+.++|.+|+..||.+||++.+++.|||
T Consensus       190 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         190 LAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            4689999998866665555544444444333445899999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.62  E-value=3.5e-08  Score=72.35  Aligned_cols=65  Identities=20%  Similarity=0.241  Sum_probs=47.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC----CCCC--------------------CCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP----PPSF--------------------REPDVWTPEFIDFVSRCLVKNPEERATA   56 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~----~~~~--------------------~~~~~~s~~~~~~i~~~l~~~p~~R~~~   56 (177)
                      |++|.+||.+.+..+.+.++....    +..+                    .....++..+++++.+||..||.+||++
T Consensus       202 l~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~  281 (290)
T cd07862         202 MFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA  281 (290)
T ss_pred             HHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCH
Confidence            578999999987766665543210    0000                    0012467889999999999999999999


Q ss_pred             HhhhcCccc
Q psy3254          57 SEMLNHEFI   65 (177)
Q Consensus        57 ~~~l~h~~~   65 (177)
                      .+++.|||+
T Consensus       282 ~~~l~hp~f  290 (290)
T cd07862         282 YSALSHPYF  290 (290)
T ss_pred             HHHhcCCCC
Confidence            999999996

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.62  E-value=5.4e-08  Score=70.19  Aligned_cols=63  Identities=24%  Similarity=0.451  Sum_probs=52.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|..||.+.+.......+..+..+.+  +..++.++.++|.+|+..+|.+||++.+++.|||+
T Consensus       198 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         198 MCCLAHAFEGQNFLSVVLRIVEGPTPSL--PETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHhCCCCCCCccHHHHHHHHHcCCCCCC--cchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            4689999988777776666655544444  56778999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.62  E-value=6.1e-08  Score=69.94  Aligned_cols=64  Identities=36%  Similarity=0.666  Sum_probs=50.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|++||.+.+......++..... ....+...+..++++|.+||..+|.+||++.+++.|+|+
T Consensus       200 l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         200 MLTEKPPWAEFEAMAAIFKIATQPT-NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHhCCCCccccchHHHHHHHhccCC-CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            4789999988776665555543322 122256789999999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0603|consensus

Probab=98.61  E-value=3.4e-08  Score=77.36  Aligned_cols=60  Identities=20%  Similarity=0.253  Sum_probs=51.2

Q ss_pred             CccCCCCCCCCCHH-HHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|+.||...... +++.+|..+   +++  ..+|..+||||++||+.||.+|+++.+++.|+|+
T Consensus       506 ML~G~tp~~~~P~~~ei~~~i~~~---~~s--~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  506 MLTGRTLFAAHPAGIEIHTRIQMP---KFS--ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHhCCCccccCCchHHHHHhhcCC---ccc--cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            79999999887554 666666444   442  6789999999999999999999999999999999

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.61  E-value=6e-08  Score=72.48  Aligned_cols=65  Identities=26%  Similarity=0.423  Sum_probs=53.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+.......+...   ....|..++++++++|.+||..||.+|+     ++.+++.|+|+...
T Consensus       189 l~tG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         189 MMCGRLPFYNQDHEKLFELILME---EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             eccCCCCCCCCCHHHHHHHHhcC---CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence            68999999998877666666544   2223667899999999999999999997     89999999999754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.61  E-value=7.3e-08  Score=69.04  Aligned_cols=63  Identities=27%  Similarity=0.477  Sum_probs=52.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|.+||...+..+....+.....+.+  +..++..+.+++.+||..+|.+||++.+++.|||+
T Consensus       196 l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         196 LCTLKHPFEGENLLELALKILKGQYPPI--PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHcCCCCCCCCcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            4689999988887776666655544444  45678999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.61  E-value=5.6e-08  Score=69.82  Aligned_cols=63  Identities=14%  Similarity=0.270  Sum_probs=52.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|..||.+.+.......+.......+  +..++.++++++.+|+..+|.+||++.+++.|||+
T Consensus       194 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         194 LASLKRAFEAANLPALVLKIMSGTFAPI--SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHhCCCCcccCchHHHHHHHHhcCCCCC--CCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            4679999998887777766665543333  45689999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.61  E-value=6.8e-08  Score=71.82  Aligned_cols=68  Identities=35%  Similarity=0.746  Sum_probs=54.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+....+.++.....+... ...++..+++|+.+||..+|.+||++.+++.|+|++...
T Consensus       213 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         213 LAERKPPLFNMNAMSALYHIAQNDSPTLQ-SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             HHhCCCCCCCCChHHHHHHHHhcCCCCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            46899999988877766666555444432 345788999999999999999999999999999998644

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.61  E-value=7.3e-08  Score=71.78  Aligned_cols=65  Identities=22%  Similarity=0.380  Sum_probs=54.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~   68 (177)
                      |++|+.||.+.+..+.+..+...   ....|..++.+++++|++||..||.+|++     +.+++.|+|+...
T Consensus       191 l~tg~~p~~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         191 MLTGSLPFQGKDRKETMTMILKA---KLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             eccCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            67899999998887777777655   23336678999999999999999999999     7779999998753

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.61  E-value=6.3e-08  Score=71.30  Aligned_cols=71  Identities=31%  Similarity=0.589  Sum_probs=54.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      |++|..||.+.+....+..+.....+.+......+..+++++.+|+..||.+||++.+++.|+|++.....
T Consensus       211 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~  281 (292)
T cd06658         211 MIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP  281 (292)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence            46899999988776655554433233333334578999999999999999999999999999999865443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0585|consensus

Probab=98.61  E-value=3.8e-08  Score=75.00  Aligned_cols=67  Identities=24%  Similarity=0.369  Sum_probs=56.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |+.|+.||.+....+++.+|.+.+ ..+++-+.+++.++|+|.++|.+||.+|.++.++..|||+...
T Consensus       312 llfG~~PF~~~~~~~l~~KIvn~p-L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  312 LLFGQLPFFDDFELELFDKIVNDP-LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             hhhccCCcccchHHHHHHHHhcCc-ccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            567999999999999999997772 2222223579999999999999999999999999999999653

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.60  E-value=5.1e-08  Score=71.39  Aligned_cols=67  Identities=51%  Similarity=1.051  Sum_probs=55.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||...+.......+.....+.+..+..++..++++|.+||..+|.+||++.+++.|+|+..
T Consensus       209 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         209 MAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence            4689999998887766666655555555444558899999999999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.60  E-value=4.7e-08  Score=71.30  Aligned_cols=66  Identities=42%  Similarity=0.912  Sum_probs=53.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+.......+....++.+  +...+..+.+++.+|+..+|.+||++.+++.|+|+...
T Consensus       194 l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         194 LAKGEPPNSDMHPMRVLFLIPKNNPPTL--TGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             HHHCCCCCCCcChHhHhhhhhcCCCCCC--chhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence            5789999998887776666544444443  44578899999999999999999999999999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.60  E-value=9.2e-08  Score=69.61  Aligned_cols=68  Identities=35%  Similarity=0.784  Sum_probs=53.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+.......+....++.+. ...++.++.+++.+||..||.+||++.+++.|+|++...
T Consensus       195 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         195 MATGNPPYSDVDAFRAMMLIPKSKPPRLE-DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             HHhCCCCCCCCChhhhhhccccCCCCCCC-cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            57899999888766655544444344442 224789999999999999999999999999999997644

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.60  E-value=6.9e-08  Score=70.72  Aligned_cols=71  Identities=27%  Similarity=0.572  Sum_probs=51.9

Q ss_pred             CccCCCCCCCCCH-HHHHhhCcCCCCCCCCC--CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254           1 MAEGKPPYGDIHP-MRAIFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~g~~Pf~~~~~-~~~~~~i~~~~~~~~~~--~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      |++|++||...+. .+.+.++..+..+.+..  +..++.++.+|+.+||..+|.+||++.+++.|+|++.....
T Consensus       203 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~  276 (288)
T cd06616         203 VATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEER  276 (288)
T ss_pred             HHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhc
Confidence            4689999977643 24444444443333321  23578999999999999999999999999999999864433

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.59  E-value=8.6e-08  Score=69.23  Aligned_cols=66  Identities=36%  Similarity=0.738  Sum_probs=49.7

Q ss_pred             CccCCCCCCCC-----CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDI-----HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||...     ...+.+..+.....+... ...++.+++++|.+|+..||.+||++.+++.|||++.
T Consensus       192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         192 LATGRFPYPPENDPPDGIFELLQYIVNEPPPRLP-SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             HHhCCCCCCccccccccHHHHHHHHhcCCCCCCC-hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence            46899999765     334444445444444442 1227899999999999999999999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG4645|consensus

Probab=98.59  E-value=3.2e-08  Score=83.15  Aligned_cols=68  Identities=29%  Similarity=0.582  Sum_probs=60.3

Q ss_pred             CccCCCCCCCC-CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |+||+.||... |....+++...+..|++  |..+|.+.+||+.+||+.||.+|.++.|++.|.|......
T Consensus      1434 M~tGkrPW~~~dne~aIMy~V~~gh~Pq~--P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1434 MATGKRPWAELDNEWAIMYHVAAGHKPQI--PERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred             eecCCCchhhccchhHHHhHHhccCCCCC--chhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence            89999999876 45688899988888888  7779999999999999999999999999999999876543

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.59  E-value=9.2e-08  Score=70.46  Aligned_cols=69  Identities=36%  Similarity=0.710  Sum_probs=54.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+..+.+..+....++.+......+..+.+++.+||..+|.+||++.+++.|+|+....
T Consensus       209 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         209 MVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence            468999999877666555444333344433456789999999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.59  E-value=6.7e-08  Score=72.21  Aligned_cols=65  Identities=25%  Similarity=0.343  Sum_probs=54.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+.+..+.....   ..|..++..+.++|.+||..||.+|+     ++.+++.|+|+...
T Consensus       194 l~~G~~pf~~~~~~~~~~~i~~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         194 MLVGESPFPGDDEEEVFDSIVNDEV---RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCC---CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            5789999999888777776665522   23567899999999999999999999     79999999999754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.58  E-value=9.9e-08  Score=70.42  Aligned_cols=69  Identities=36%  Similarity=0.721  Sum_probs=55.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||...+..+.+..+.....+....+..++..+.++|.+||..+|.+||++.+++.|+|+....
T Consensus       210 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~  278 (297)
T cd06659         210 MVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTG  278 (297)
T ss_pred             HHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence            468999998887776666655444444444556789999999999999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG1167|consensus

Probab=98.58  E-value=1.5e-08  Score=75.72  Aligned_cols=78  Identities=29%  Similarity=0.430  Sum_probs=57.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccc-------c-------C------
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDT-------M-------A------  146 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~-------~-------~------  146 (177)
                      .+.++.++|..+++|+|+|            |.|++.+. .+.-.+.|||++......       .       .      
T Consensus       141 ll~Al~~~h~~GIvHRDiK------------psNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~  208 (418)
T KOG1167|consen  141 LLKALAHLHKNGIVHRDIK------------PSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDV  208 (418)
T ss_pred             HHHHhhhhhccCccccCCC------------ccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcc
Confidence            3677889999999999999            66999875 456789999998621100       0       0      


Q ss_pred             ---------------C---------CccccccccccccccccCC-CCCccceEecC
Q psy3254         147 ---------------K---------RNTVIGTPFWMAPEVIQEI-GYDCVADMWSL  177 (177)
Q Consensus       147 ---------------~---------~~~~~g~~~y~aPe~~~~~-~~~~~~Diws~  177 (177)
                                     .         ...+.||++|.|||++... .-++++||||.
T Consensus       209 ~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~  264 (418)
T KOG1167|consen  209 HCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA  264 (418)
T ss_pred             cccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence                           0         0124699999999999764 46788999983

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.58  E-value=1.1e-07  Score=71.07  Aligned_cols=69  Identities=19%  Similarity=0.241  Sum_probs=54.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |++|++||.+.+....+.++.... ...+.....++.++++||.+||. +|.+|+++.+++.|+|+....+
T Consensus       202 l~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~  271 (330)
T cd05601         202 MIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDW  271 (330)
T ss_pred             eccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence            679999999888777766665432 22333234679999999999997 9999999999999999986443

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.58  E-value=6.3e-08  Score=72.15  Aligned_cols=66  Identities=20%  Similarity=0.338  Sum_probs=52.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-HhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA-SEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~-~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+..+....+... .+.+  |..++.+++++|.+||..||.+|+++ ++++.|+|+....
T Consensus       189 l~~g~~Pf~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~  255 (316)
T cd05620         189 MLIGQSPFHGDDEDELFESIRVD-TPHY--PRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN  255 (316)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhC-CCCC--CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence            57899999998877766666443 2233  55679999999999999999999997 5788999997643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.57  E-value=1.1e-07  Score=72.53  Aligned_cols=68  Identities=16%  Similarity=0.199  Sum_probs=54.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEE--RATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~--R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+....+.+|.... ...++....+|.++++||.+||..+|.+  |+++.+++.|+|+...
T Consensus       240 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         240 MLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            578999999998877777776542 2333322357999999999999999987  9999999999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.57  E-value=9.9e-08  Score=68.54  Aligned_cols=63  Identities=41%  Similarity=0.789  Sum_probs=50.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC-CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |++|++||..........++.. ...+.+  +..++..+++++.+||..+|.+||++.+++.|||+
T Consensus       195 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         195 MATGKPPWSQLEGVAAVFKIGRSKELPPI--PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HHhCCCCcccCcHHHHHHHHHhcccCCCc--CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            4689999988776666555544 222333  56789999999999999999999999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.57  E-value=3.8e-08  Score=72.16  Aligned_cols=72  Identities=15%  Similarity=0.241  Sum_probs=51.7

Q ss_pred             CccCCCCCCCCCHH---HHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccCCCCC
Q psy3254           1 MAEGKPPYGDIHPM---RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVSPGGN   72 (177)
Q Consensus         1 m~~g~~Pf~~~~~~---~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~~~~~   72 (177)
                      |++|++||.+.+..   +.+.+........+  +..+|.++++|+++||..||.+|++     ++++++|||+.......
T Consensus       194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~  271 (285)
T cd05631         194 MIQGQSPFRKRKERVKREEVDRRVKEDQEEY--SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKR  271 (285)
T ss_pred             HHhCCCCCCCCCcchhHHHHHHHhhcccccC--CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHH
Confidence            57899999876532   22222222222222  5678999999999999999999987     89999999998765444


Q ss_pred             CC
Q psy3254          73 IP   74 (177)
Q Consensus        73 ~~   74 (177)
                      +.
T Consensus       272 ~~  273 (285)
T cd05631         272 LE  273 (285)
T ss_pred             HH
Confidence            33

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG1024|consensus

Probab=98.57  E-value=1.4e-08  Score=75.82  Aligned_cols=78  Identities=21%  Similarity=0.304  Sum_probs=62.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--CccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|.|+.            .+|.+++..-.+|++|-.++|.+.+....  .....-+..||++|.+..
T Consensus       405 la~am~hlh~~~ViHkDiA------------aRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n  472 (563)
T KOG1024|consen  405 LAMAMEHLHNHGVIHKDIA------------ARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN  472 (563)
T ss_pred             HHHHHHHHHhcCcccchhh------------hhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh
Confidence            3567779999999999988            67999999999999999999976543211  111223568999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|+|||
T Consensus       473 ~~yssasDvWsf  484 (563)
T KOG1024|consen  473 SHYSSASDVWSF  484 (563)
T ss_pred             hhhcchhhhHHH
Confidence            999999999996

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.56  E-value=6.5e-08  Score=69.71  Aligned_cols=64  Identities=47%  Similarity=1.058  Sum_probs=49.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF   64 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~   64 (177)
                      |++|.+||.+.+.......+...  .++....+..++.++++++.+|+..+|.+||++.+++.|+|
T Consensus       197 ~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         197 LAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            57899999988766555544443  22333334456889999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.56  E-value=6.8e-08  Score=70.47  Aligned_cols=70  Identities=33%  Similarity=0.692  Sum_probs=51.8

Q ss_pred             CccCCCCCCCC-CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254           1 MAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      |++|+.||... +..+.+.++..+..+.+. ...+|.+++++|.+||..+|.+||++.+++.|+|++.....
T Consensus       200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         200 LATGRFPYDSWKTPFQQLKQVVEEPSPQLP-AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             HHhCCCCCCccccCHHHHHHHHhcCCCCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence            57899999753 333444444444333432 24578999999999999999999999999999999875433

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.56  E-value=7e-08  Score=71.53  Aligned_cols=37  Identities=19%  Similarity=0.337  Sum_probs=34.0

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      .++.+++|||.+||..||.+|+++.+++.|+|++...
T Consensus       257 ~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         257 RLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             CCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            4688999999999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	177
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-27
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		6e-20
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-19
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-19
3a7f_A	303	Human Mst3 Kinase Length = 303		9e-19
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		9e-19
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-18
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		7e-13
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		8e-13
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		4e-12
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		5e-12
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		8e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-12
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		8e-12
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		7e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		8e-12
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		9e-12
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		9e-12
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		9e-12
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-11
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		4e-11
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		4e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		4e-11
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-11
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		5e-11
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-11
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-11
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		5e-11
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		5e-11
4fie_A	423	Full-Length Human Pak4 Length = 423		8e-11
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		1e-10
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		1e-10
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-10
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-10
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-10
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-10
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		3e-09
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-09
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-08
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-08
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		3e-08
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-08
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		5e-08
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		6e-08
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		8e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		9e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-07
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		3e-07
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-07
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		4e-07
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		6e-07
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-06
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-06
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-06
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-06
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-06
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-06
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-06
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-06
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		3e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-06
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-06
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		4e-06
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		4e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		4e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		4e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		4e-06
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		5e-06
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		5e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		5e-06
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-06
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-06
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-06
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-06
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		6e-06
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		6e-06
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		6e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		6e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		6e-06
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		6e-06
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		6e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		6e-06
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		6e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		7e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		8e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		8e-06
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		8e-06
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-05
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-05
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-05
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-05
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-05
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-05
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-05
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-05
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-05
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-05
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-05
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-05
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-05
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-05
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		3e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		4e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		4e-05
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-05
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-05
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-05
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-05
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		4e-05
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-05
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		4e-05
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		4e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		5e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-05
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		5e-05
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		5e-05
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		5e-05
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		5e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-05
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		5e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		5e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		5e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		5e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		5e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		5e-05
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		5e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		5e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		5e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		5e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-05
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		5e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		5e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		5e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		5e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		5e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		5e-05
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		5e-05
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		5e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		5e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		5e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		5e-05
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		5e-05
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		6e-05
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		6e-05
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		6e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		6e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		6e-05
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		6e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		6e-05
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		6e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		6e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		6e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		7e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		8e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		9e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-04
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-04
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-04
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-04
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-04
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-04
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-04
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-04
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-04
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-04
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-04
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-04
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-04
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-04
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-04
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-04
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		3e-04
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		4e-04
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		4e-04
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		4e-04
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		4e-04
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-04
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		4e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		5e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		5e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		5e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		6e-04
3gni_B	389	Structure Of Strad And Mo25 Length = 389		6e-04
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		6e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		6e-04
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		6e-04
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		7e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		7e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		7e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		8e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		9e-04

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 53/57 (92%), Positives = 55/57 (96%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTD MAKRN VIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 155 NILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 47/57 (82%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G  KLADFGVAGQLTDT  KRNT +GTPFWMAPEVIQ+  YD  AD+WSL
Sbjct: 150 NVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSL 206

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 46/57 (80%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+  G  KLADFGVAGQLTDT  KRNT +GTPFWMAPEVI++  YD  AD+WSL
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 190

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 46/57 (80%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+  G  KLADFGVAGQLTDT  KRNT +GTPFWMAPEVI++  YD  AD+WSL
Sbjct: 154 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 210

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 89.7 bits (221), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+  G  KLADFGVAGQLTDT  KRN  +GTPFWMAPEVI++  YD  AD+WSL
Sbjct: 149 NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 205

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 89.4 bits (220), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 45/57 (78%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+  G  KLADFGVAGQLTDT  KRN  +GTPFWMAPEVI++  YD  AD+WSL
Sbjct: 134 NVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSL 190

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 46/57 (80%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G  KLADFGVAGQLTDT  KRN  +GTPFWMAPEVI++  YD  AD+WSL
Sbjct: 146 NVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSL 202

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
            + L+FL  + + HR    D            NILL  +G  KL DFG   Q+T   +KR
Sbjct: 127 LQALEFLHSNQVIHRNIKSD------------NILLGMDGSVKLTDFGFCAQITPEQSKR 174
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +T++GTP+WMAPEV+    Y    D+WSL
Sbjct: 175 STMVGTPYWMAPEVVTRKAYGPKVDIWSL 203

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 69.7 bits (169), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 14/93 (15%)
Query: 90  EFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRN 149
           E L+ LS+   QH++ + D + +        N+LL      KL DFGV+ QL  T+ +RN
Sbjct: 137 EILRGLSHLH-QHKVIHRDIKGQ--------NVLLTENAEVKLVDFGVSAQLDRTVGRRN 187
Query: 150 TVIGTPFWMAPEVIQ-----EIGYDCVADMWSL 177
           T IGTP+WMAPEVI      +  YD  +D+WSL
Sbjct: 188 TFIGTPYWMAPEVIACDENPDATYDFKSDLWSL 220

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
            + L+FL  + + HR    D            NILL  +G  KL DFG   Q+T   +KR
Sbjct: 126 LQALEFLHSNQVIHRDIKSD------------NILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +T++GTP+WMAPEV+    Y    D+WSL
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
            + L+FL  + + HR    D            NILL  +G  KL DFG   Q+T   +KR
Sbjct: 127 LQALEFLHSNQVIHRDIKSD------------NILLGMDGSVKLTDFGFCAQITPEQSKR 174
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           + ++GTP+WMAPEV+    Y    D+WSL
Sbjct: 175 SXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
            + L+FL  + + HR    D            NILL  +G  KL DFG   Q+T   +KR
Sbjct: 126 LQALEFLHSNQVIHRDIKSD------------NILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           + ++GTP+WMAPEV+    Y    D+WSL
Sbjct: 174 SXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
            + L+FL  + + HR    D            NILL  +G  KL DFG   Q+T   +KR
Sbjct: 126 LQALEFLHSNQVIHRDIKSD------------NILLGMDGSVKLTDFGFCAQITPEQSKR 173
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           + ++GTP+WMAPEV+    Y    D+WSL
Sbjct: 174 SEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 66.6 bits (161), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMW 175
           N+L+  EG  +LADFGV+ +   T+ KR++ IGTP+WMAPEV+     ++  YD  AD+W
Sbjct: 147 NVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 206
Query: 176 SL 177
           SL
Sbjct: 207 SL 208

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAE +PP+ +++PMR +  I    PP+  +P  W+  F DF+ +CL KN + R T S++L
Sbjct: 233 MAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
Query: 61  NHEFIQV 67
            H F+ V
Sbjct: 293 QHPFVTV 299

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMW 175
           NIL   +G  KLADFGV+ + T T+ +R++ IGTP+WMAPEV+     ++  YD  AD+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 176 SL 177
           SL
Sbjct: 225 SL 226

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAE +PP+ +++PMR +  I    PP+  +P  W+  F DF+ +CL KN + R T S++L
Sbjct: 233 MAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
Query: 61  NHEFIQV 67
            H F+ V
Sbjct: 293 QHPFVTV 299

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMW 175
           NIL   +G  KLADFGV+ + T  + +R++ IGTP+WMAPEV+     ++  YD  AD+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 176 SL 177
           SL
Sbjct: 225 SL 226

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 66.2 bits (160), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAE +PP+ +++PMR +  I    PP+  +P  W+  F DF+ +CL KN + R T S++L
Sbjct: 233 MAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292
Query: 61  NHEFIQV 67
            H F+ V
Sbjct: 293 QHPFVTV 299

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMW 175
           NIL   +G  KLADFGV+ + T  + +R+  IGTP+WMAPEV+     ++  YD  AD+W
Sbjct: 165 NILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 176 SL 177
           SL
Sbjct: 225 SL 226

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 66.2 bits (160), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMW 175
           N+L+  EG  +LADFGV+ +   T+ KR++ IGTP+WMAPEV+     ++  YD  AD+W
Sbjct: 139 NVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 198
Query: 176 SL 177
           SL
Sbjct: 199 SL 200

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL ++G  KL+DFG   Q++  + KR  ++GTP+WMAPEVI  + Y    D+WSL
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSL 227

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           L+ L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 124 LRGLAYLREKHQI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 173
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +MAPE +Q   Y   +D+WS+
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSM 199

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 176 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 225
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSM 251

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + KR  ++GTP+WMAPEVI    Y    D+WSL
Sbjct: 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSL 227

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 114 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 163
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 141 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 190
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSM 216

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 133 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 182
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSM 208

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 114 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 163
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 114 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 163
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 114 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 163
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D+MA  N+ 
Sbjct: 114 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDSMA--NSF 163
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSM 189

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + +R  ++GTP+WMAPE+I  + Y    D+WSL
Sbjct: 277 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 333

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + +R  ++GTP+WMAPE+I  + Y    D+WSL
Sbjct: 155 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 211

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + +R  ++GTP+WMAPE+I  + Y    D+WSL
Sbjct: 200 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 256

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + +R  ++GTP+WMAPE+I  + Y    D+WSL
Sbjct: 157 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 213

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + +R  ++GTP+WMAPE+I  + Y    D+WSL
Sbjct: 146 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 202

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + +R  ++GTP+WMAPE+I  + Y    D+WSL
Sbjct: 150 SILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSL 206

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K L+Y   +H++      M R+++    NIL+N+ G  KL DFGV+GQL D MA  N  
Sbjct: 117 IKGLTYLREKHKI------MHRDVKP--SNILVNSRGEIKLCDFGVSGQLIDEMA--NEF 166
Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
           +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSM 192

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 8/63 (12%)
Query: 121 NILLNTEGHAKLADFGVA------GQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVAD 173
           NILL  +G  ++ADFGV+      G +T     R T +GTP WMAPEV++++ GYD  AD
Sbjct: 151 NILLGEDGSVQIADFGVSAFLATGGDITRNKV-RKTFVGTPCWMAPEVMEQVRGYDFKAD 209
Query: 174 MWS 176
           +WS
Sbjct: 210 IWS 212

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 8/63 (12%)
Query: 121 NILLNTEGHAKLADFGVA------GQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVAD 173
           NILL  +G  ++ADFGV+      G +T     R T +GTP WMAPEV++++ GYD  AD
Sbjct: 146 NILLGEDGSVQIADFGVSAFLATGGDITRNKV-RKTFVGTPCWMAPEVMEQVRGYDFKAD 204
Query: 174 MWS 176
           +WS
Sbjct: 205 IWS 207

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 100 LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMA 159
           L H   NL   + R+I+    NILL+  G+ KL DFG++GQL D++AK       P+ MA
Sbjct: 138 LNHLKENLKI-IHRDIKP--SNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPY-MA 193
Query: 160 PEVI----QEIGYDCVADMWSL 177
           PE I       GYD  +D+WSL
Sbjct: 194 PERIDPSASRQGYDVRSDVWSL 215

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSL 177
           NILL+  G  KL DFG A      MA  N  +GTP+WMAPEVI    E  YD   D+WSL
Sbjct: 145 NILLSEPGLVKLGDFGSAS----IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/60 (51%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSL 177
           NILL+  G  KL DFG A      MA  N  +GTP+WMAPEVI    E  YD   D+WSL
Sbjct: 184 NILLSEPGLVKLGDFGSA----SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 239

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           NILL+ EGH KL DFG++ +  D   K  +  GT  +MAPEV+   G+   AD WS
Sbjct: 160 NILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWS 215

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ EGH KL DFG++ +  D   K  +  GT  +MAPEV+   G+   AD WS 
Sbjct: 156 NILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ EGH KL DFG++ +  D   K  +  GT  +MAPEV+   G+   AD WS 
Sbjct: 156 NILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ EGH KL DFG++ +  D   K  +  GT  +MAPEV+   G+   AD WS 
Sbjct: 157 NILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 213

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           + R+I+   +NI L  +G  +L DFG+A  L  T+      IGTP++++PE+ +   Y+ 
Sbjct: 147 LHRDIKS--QNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 171 VADMWSL 177
            +D+W+L
Sbjct: 205 KSDIWAL 211

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ EGH KLADFG+  +         T  GTP ++APE++QE+ Y    D W++
Sbjct: 154 NVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAM 210

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 111 MEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC 170
           M R+I+    N+ +   G  KL D G+    +      ++++GTP++M+PE I E GY+ 
Sbjct: 158 MHRDIKPA--NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF 215
Query: 171 VADMWSL 177
            +D+WSL
Sbjct: 216 KSDIWSL 222

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+++GH  L DFG+  +  +  +  +T  GTP ++APEV+ +  YD   D W L
Sbjct: 169 NILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCL 225

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ L+ + + KL DFG+A  L    +   T +GTP++M+PE +  + Y+  +D+WSL
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +GH K+ADFG+  +     AK N   GTP ++APE++    Y+   D WS 
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSF 204

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +GH K+ADFG+  +     AK N   GTP ++APE++    Y+   D WS 
Sbjct: 149 NILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSF 205

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+LN +GH KL DFG+  +        +T  GT  +MAPE++   G++   D WSL
Sbjct: 151 NIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSL 207

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ L+ + + KL DFG+A  L    +     +GTP++M+PE +  + Y+  +D+WSL
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++ T+ GTP ++APEV+ + G+    D+WS+
Sbjct: 147 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 203

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++ T+ GTP ++APEV+ + G+    D+WS+
Sbjct: 147 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 203

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++ T+ GTP ++APEV+ + G+    D+WS+
Sbjct: 151 NLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSI 207

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADMW 175
           NILL+  G  KL DFG++G+L D  AK  +  G   +MAPE I      +  YD  AD+W
Sbjct: 155 NILLDERGQIKLCDFGISGRLVDDKAKDRSA-GCAAYMAPERIDPPDPTKPDYDIRADVW 213
Query: 176 SL 177
           SL
Sbjct: 214 SL 215

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 138 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 194

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI----QEIGYDCVADMWS 176
           N+L+N  G  K+ DFG++G L D++AK     G   +MAPE I     + GY   +D+WS
Sbjct: 184 NVLINALGQVKMCDFGISGYLVDSVAK-TIDAGCKPYMAPERINPELNQKGYSVKSDIWS 242
Query: 177 L 177
           L
Sbjct: 243 L 243

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 282 NLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 338

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 279 NLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 335

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++ T+ GTP ++APEV+ + G+    D+WSL
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSL 228

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+LN +GH KL DFG+  +        +   GT  +MAPE++   G++   D WSL
Sbjct: 151 NIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSL 207

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI----QEIGYDCVADMWS 176
           N+L+N  G  K+ DFG++G L D +AK +   G   +MAPE I     + GY   +D+WS
Sbjct: 140 NVLINALGQVKMCDFGISGYLVDDVAK-DIDAGCKPYMAPERINPELNQKGYSVKSDIWS 198
Query: 177 L 177
           L
Sbjct: 199 L 199

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++  + GTP ++APEV+ + G+    D+WS+
Sbjct: 169 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 225

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++  + GTP ++APEV+ + G+    D+WS+
Sbjct: 171 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 227

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
           NILL+  GH +++D G+A   +    K +  +GT  +MAPEV+Q+ + YD  AD +SL
Sbjct: 322 NILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++  + GTP ++APEV+ + G+    D+WS+
Sbjct: 145 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 201

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
           NILL+  GH +++D G+A   +    K +  +GT  +MAPEV+Q+ + YD  AD +SL
Sbjct: 322 NILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
           NILL+  GH +++D G+A   +    K +  +GT  +MAPEV+Q+ + YD  AD +SL
Sbjct: 322 NILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
           NILL+  GH +++D G+A   +    K +  +GT  +MAPEV+Q+ + YD  AD +SL
Sbjct: 321 NILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 376

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQEIGYDCV----ADMW 175
           N+LL+  GH KLADFG   ++ +T M   +T +GTP +++PEV++  G D       D W
Sbjct: 204 NMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 263
Query: 176 SL 177
           S+
Sbjct: 264 SV 265

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++EGH KL D+G+  +        +T  GTP ++APE+++   Y    D W+L
Sbjct: 183 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 239

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL    + K+ADFG+A QL     K  T+ GTP +++PE+     +   +D+WSL
Sbjct: 142 NLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSL 198

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A      GTP ++APEV+++  Y    D W L
Sbjct: 141 NLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 197

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A      GTP ++APEV+++  Y    D W L
Sbjct: 139 NLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 195

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A      GTP ++APEV+++  Y    D W L
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A      GTP ++APEV+++  Y    D W L
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ L+ + + KL DFG+A  L          +GTP++M+PE +  + Y+  +D+WSL
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A      GTP ++APEV+++  Y    D W L
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A      GTP ++APEV+++  Y    D W L
Sbjct: 140 NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 196

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ K+ADFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIGYDCV----ADMW 175
           N+LL+  GH KLADFG   ++  + M + +T +GTP +++PEV++  G D       D W
Sbjct: 203 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 176 SL 177
           S+
Sbjct: 263 SV 264

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A      GTP ++APEV+++  Y    D W L
Sbjct: 140 NLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 196

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIGYDCV----ADMW 175
           N+LL+  GH KLADFG   ++  + M + +T +GTP +++PEV++  G D       D W
Sbjct: 198 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 257
Query: 176 SL 177
           S+
Sbjct: 258 SV 259

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ K+ADFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 121 NILLNTEGHAKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEIGYDCV----ADMW 175
           N+LL+  GH KLADFG   ++  + M + +T +GTP +++PEV++  G D       D W
Sbjct: 203 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 176 SL 177
           S+
Sbjct: 263 SV 264

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ K+ADFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ K+ADFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIKVADFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++  + GTP ++APEV+ + G+    D+WSL
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSL 228

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++  + GTP ++APEV+ + G+    D+WSL
Sbjct: 156 NLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSL 212

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++  + GTP ++APEV+ + G+    D+WSL
Sbjct: 172 NLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSL 228

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAK 147
            E LK+L  + + HR    D            N+L+NT  G  K++DFG + +L      
Sbjct: 132 LEGLKYLHDNQIVHRDIKGD------------NVLINTYSGVLKISDFGTSKRLAGINPC 179
Query: 148 RNTVIGTPFWMAPEVIQEI--GYDCVADMWSL 177
             T  GT  +MAPE+I +   GY   AD+WSL
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE---IGYDCVADMWSL 177
           N+L+  +GH K+ADFGV+ +   + A  +  +GTP +MAPE + E   I      D+W++
Sbjct: 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAK 147
            E LK+L  + + HR    D            N+L+NT  G  K++DFG + +L      
Sbjct: 118 LEGLKYLHDNQIVHRDIKGD------------NVLINTYSGVLKISDFGTSKRLAGINPC 165
Query: 148 RNTVIGTPFWMAPEVIQEI--GYDCVADMWSL 177
             T  GT  +MAPE+I +   GY   AD+WSL
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 197

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N+ +GT  +++PE++ E      +D+W+L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWAL 220

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +  T+ GTP ++APE+I   GY+   D W+L
Sbjct: 157 NLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 210

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +  T+ GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 7/62 (11%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVADM 174
           NILL+ + + KL DFG + QL D   K  +V GTP ++APE+I+        GY    DM
Sbjct: 154 NILLDDDMNIKLTDFGFSCQL-DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 175 WS 176
           WS
Sbjct: 213 WS 214

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH K+ DFG A  + D       + GTP ++APEV+    Y+   D WS 
Sbjct: 136 NILLDKNGHIKITDFGFAKYVPDVTY---XLCGTPDYIAPEVVSTKPYNKSIDWWSF 189

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++        T+ GTP ++APE+I   GY+   D W+L
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGATW---TLCGTPEYLAPEIILSKGYNKAVDWWAL 245

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++EGH KL D+G+  +        +   GTP ++APE+++   Y    D W+L
Sbjct: 140 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 196

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 93  KFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 152
           +FL   D  H     +C + R+++    NIL+ + G  KLADFG+A   +  MA    V+
Sbjct: 128 QFLRGLDFLH----ANCIVHRDLKP--ENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
Query: 153 GTPFWMAPEVIQEIGYDCVADMWSL 177
            T ++ APEV+ +  Y    DMWS+
Sbjct: 182 -TLWYRAPEVLLQSTYATPVDMWSV 205

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++EGH KL D+G+  +        +   GTP ++APE+++   Y    D W+L
Sbjct: 136 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 192

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++EGH KL D+G+  +        +   GTP ++APE+++   Y    D W+L
Sbjct: 151 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 207

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ K+ DFG+A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLMIDQQGYIKVTDFGLAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L +    HR+ + D + +        NIL+ + G  KLADFG+A   +  MA  
Sbjct: 127 FQLLRGLDFLH-SHRVVHRDLKPQ--------NILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           + V+ T ++ APEV+ +  Y    D+WS+
Sbjct: 178 SVVV-TLWYRAPEVLLQSSYATPVDLWSV 205

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N+ +GT  +++PE++ E      +D+W+L
Sbjct: 159 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 217

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 93  KFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 152
           +FL   D  H     +C + R+++    NIL+ + G  KLADFG+A   +  MA  + V+
Sbjct: 120 QFLRGLDFLH----ANCIVHRDLKP--ENILVTSGGTVKLADFGLARIYSYQMAL-DPVV 172
Query: 153 GTPFWMAPEVIQEIGYDCVADMWSL 177
            T ++ APEV+ +  Y    DMWS+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSV 197

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L +    HR+ + D + +        NIL+ + G  KLADFG+A   +  MA  
Sbjct: 127 FQLLRGLDFLH-SHRVVHRDLKPQ--------NILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           + V+ T ++ APEV+ +  Y    D+WS+
Sbjct: 178 SVVV-TLWYRAPEVLLQSSYATPVDLWSV 205

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTV-IGTPFWMAPEVIQEI-----GYDCVADM 174
           N+LL+  GH +LADFG   ++ D    +++V +GTP +++PE++Q +      Y    D 
Sbjct: 221 NVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDW 280
Query: 175 WSL 177
           WSL
Sbjct: 281 WSL 283

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L +    HR+ + D + +        NIL+ + G  KLADFG+A   +  MA  
Sbjct: 127 FQLLRGLDFLH-SHRVVHRDLKPQ--------NILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           + V+ T ++ APEV+ +  Y    D+WS+
Sbjct: 178 SVVV-TLWYRAPEVLLQSSYATPVDLWSV 205

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTV-IGTPFWMAPEVIQEI-----GYDCVADM 174
           N+LL+  GH +LADFG   ++ D    +++V +GTP +++PE++Q +      Y    D 
Sbjct: 205 NVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDW 264
Query: 175 WSL 177
           WSL
Sbjct: 265 WSL 267

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 93  KFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 152
           +FL   D  H     +C + R+++    NIL+ + G  KLADFG+A   +  MA    V+
Sbjct: 120 QFLRGLDFLH----ANCIVHRDLKP--ENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 153 GTPFWMAPEVIQEIGYDCVADMWSL 177
            T ++ APEV+ +  Y    DMWS+
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSV 197

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 100 LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMA 159
           L+H  + L   + R+++    N+L+N  G  K  DFG++G L D +AK +   G   + A
Sbjct: 149 LEHLHSKLSV-IHRDVKP--SNVLINALGQVKXCDFGISGYLVDDVAK-DIDAGCKPYXA 204
Query: 160 PEVI----QEIGYDCVADMWSL 177
           PE I     + GY   +D+WSL
Sbjct: 205 PERINPELNQKGYSVKSDIWSL 226

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWAL 220

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N+ +GT  +++PE++ E      +D+W+L
Sbjct: 163 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 221

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVADM 174
           NILL+ + + KL DFG + QL D   K   V GTP ++APE+I+        GY    DM
Sbjct: 154 NILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212
Query: 175 WS 176
           WS
Sbjct: 213 WS 214

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVADM 174
           NILL+ + + KL DFG + QL D   K   V GTP ++APE+I+        GY    DM
Sbjct: 141 NILLDDDMNIKLTDFGFSCQL-DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 199
Query: 175 WS 176
           WS
Sbjct: 200 WS 201

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ K+ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ K+ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ K+ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ K+ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ K+ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ K+ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 139 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 197

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 140 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 198

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 137 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 195

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 138 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 196

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 93  KFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI 152
           +FL   D  H     +C + R+++    NIL+ + G  KLADFG+A   +  MA    V+
Sbjct: 120 QFLRGLDFLH----ANCIVHRDLKP--ENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 153 GTPFWMAPEVIQEIGYDCVADMWSL 177
            T ++ APEV+ +  Y    DMWS+
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSV 197

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLXGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWAL 218

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 144 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 202

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLAGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L++EGH K+ADFG+  +            GTP ++APE+I    Y    D W+ 
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQ-LTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           N++L++EGH K+ADFG+  + + D +  R    GTP ++APE+I    Y    D W+
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTRE-FCGTPDYIAPEIIAYQPYGKSVDWWA 205

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 159 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 217

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           N+LL ++ ++   KL DFGVA QL ++       +GTP +MAPEV++   Y    D+W 
Sbjct: 160 NVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 166 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 219

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 218

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 167 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 225

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 158 NLLIDEQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 211

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 163 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 221

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L++EGH K+ADFG+  +            GTP ++APE+I    Y    D W+ 
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 10/65 (15%)
Query: 121 NILLNTEGHAKLADFGVAGQLT-DTMAKRNTVIGTPFWMAPEVIQEI-------GYDCVA 172
           NIL++  GH +LADFG   +L  D   + +  +GTP +++PE++Q +       G +C  
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPEC-- 262
Query: 173 DMWSL 177
           D WSL
Sbjct: 263 DWWSL 267

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 220

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ ++ DFG+A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLMIDQQGYIQVTDFGLAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N  +GT  +++PE++ E      +D+W+L
Sbjct: 165 NILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWAL 223

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G+ +++D G+A +L     K     GTP +MAPE++    YD   D ++L
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G+ +++D G+A +L     K     GTP +MAPE++    YD   D ++L
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G+ +++D G+A +L     K     GTP +MAPE++    YD   D ++L
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 14/71 (19%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMA--------------KRNTVIGTPFWMAPEVIQEI 166
           N L+    +  +ADFG+A  + D                 KR TV+G P+WMAPE+I   
Sbjct: 138 NCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR 197
Query: 167 GYDCVADMWSL 177
            YD   D++S 
Sbjct: 198 SYDEKVDVFSF 208

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G+ +++D G+A +L     K     GTP +MAPE++    YD   D ++L
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ LS+    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLSFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 120 RNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RNIL+ +E H K+ADFG+A  L    D    R       FW APE + +  +   +D+WS
Sbjct: 140 RNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 199
Query: 177 L 177
Sbjct: 200 F 200

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 120 RNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RNIL+ +E H K+ADFG+A  L    D    R       FW APE + +  +   +D+WS
Sbjct: 143 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 202
Query: 177 L 177
Sbjct: 203 F 203

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 120 RNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RNIL+ +E H K+ADFG+A  L    D    R       FW APE + +  +   +D+WS
Sbjct: 144 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 203
Query: 177 L 177
Sbjct: 204 F 204

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLMIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + E        N+L+NTEG  KLADFG+A      +   
Sbjct: 113 FQLLQGLAFCH-SHRVLHRDLKPE--------NLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 120 RNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RNIL+ +E H K+ADFG+A  L    D    R       FW APE + +  +   +D+WS
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 215
Query: 177 L 177
Sbjct: 216 F 216

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + E        N+L+NTEG  KLADFG+A      +   
Sbjct: 112 FQLLQGLAFCH-SHRVLHRDLKPE--------NLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 192

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQ-LTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSL 177
           NILL++ GH  L DFG++ + + D   +     GT  +MAP++++  + G+D   D WSL
Sbjct: 189 NILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 248

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + E        N+L+NTEG  KLADFG+A      +   
Sbjct: 111 FQLLQGLAFCH-SHRVLHRDLKPE--------NLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + E        N+L+NTEG  KLADFG+A      +   
Sbjct: 111 FQLLQGLAFCH-SHRVLHRDLKPE--------NLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++++ +G+ ++ DFG A ++     +   + GTP ++APE+I   GY+   D W+L
Sbjct: 171 NLIIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPEIIISKGYNKAVDWWAL 224

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + E        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLAFCH-SHRVLHRDLKPE--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 117 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSL 197

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 129 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           H KL DFG+A ++ D +  +N + GTP ++APE++        ADMWS+
Sbjct: 157 HIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSI 204

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSL 190

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query: 101 QHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAP 160
           Q R+ + D + E        N+LL+ + + K+ADFG + + T    K +T  G+P + AP
Sbjct: 129 QKRIVHRDLKAE--------NLLLDADMNIKIADFGFSNEFT-VGGKLDTFCGSPPYAAP 179
Query: 161 EVIQEIGYDC-VADMWSL 177
           E+ Q   YD    D+WSL
Sbjct: 180 ELFQGKKYDGPEVDVWSL 197

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 129 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           H KL DFG+A ++ D +  +N + GTP ++APE++        ADMWS+
Sbjct: 157 HIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSI 204

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 129 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           H KL DFG+A ++ D +  +N + GTP ++APE++        ADMWS+
Sbjct: 157 HIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSI 204

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 117 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 167
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 197

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 129 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           H KL DFG+A ++ D +  +N + GTP ++APE++        ADMWS+
Sbjct: 157 HIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSI 204

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 109 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 129 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           H KL DFG+A ++ D +  +N + GTP ++APE++        ADMWS+
Sbjct: 157 HIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSI 204

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 109 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 129 HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           H KL DFG+A ++ D +  +N + GTP ++APE++        ADMWS+
Sbjct: 157 HIKLIDFGLAHEIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEADMWSI 204

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 114 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 194

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 109 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 111 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH +++D G+A  + +    +  V GT  +MAPEV++   Y    D W+L
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWAL 371

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 109 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH +++D G+A  + +    +  V GT  +MAPEV++   Y    D W+L
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSPDWWAL 371

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 113 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 112 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 192

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP  +APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEALAPEIILSKGYNKAVDWWAL 224

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 112 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 192

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 113 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 111 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 114 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 164
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 165 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 194

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 109 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 160 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 113 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 109 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 159
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 160 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 110 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 160
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 161 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++     +   + GTP ++AP +I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK---GRTWXLCGTPEYLAPAIILSKGYNKAVDWWAL 224

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 113 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 111 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 161
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 162 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 191

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 113 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 163
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 193

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR 148
           F+ L+ L++    HR+ + D + +        N+L+NTEG  KLADFG+A      +   
Sbjct: 112 FQLLQGLAFCH-SHRVLHRDLKPQ--------NLLINTEGAIKLADFGLARAFGVPVRTY 162
Query: 149 NTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
              + T ++ APE++    Y   A D+WSL
Sbjct: 163 XHEVVTLWYRAPEILLGCKYYSTAVDIWSL 192

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R+T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 139 NLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 193

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 121 NILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPFWMAPEVIQEI 166
           NILL+  GH +LADFG   +L  D   +    +GTP +++PE++Q +
Sbjct: 192 NILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV 238

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
           +N+L+NTEG  KLADFG+A      +      + T ++ APE++    Y   A D+WSL
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSL 190

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R+T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 142 NLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 164 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 218

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 155 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 209

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE I+   +D   D+WSL
Sbjct: 143 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSL 197

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 143 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 197

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 143 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 197

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 141 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 195

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 138 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 192

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 142 NLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 137 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 191

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 141 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 195

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE---IGYDCVADMWSL 177
           NILL+  GH  + DF +A  L     +  T+ GT  +MAPE+       GY    D WSL
Sbjct: 145 NILLDEHGHVHITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSL 203

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 135 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 189

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +  +    ++R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 142 NLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +     +  +R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 139 NLLLGSAGELKIADFGWSCHAPSS--RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSL 193

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 91  FLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNT 150
           F + LS  D  HR   +  +++ E      N+LL+   +AK+ADFG++  ++D    R++
Sbjct: 117 FQQILSAVDYCHRHMVVHRDLKPE------NVLLDAHMNAKIADFGLSNMMSDGEFLRDS 170
Query: 151 VIGTPFWMAPEVIQEIGYDC-VADMWS 176
             G+P + APEVI    Y     D+WS
Sbjct: 171 C-GSPNYAAPEVISGRLYAGPEVDIWS 196

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 91  FLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNT 150
           F + LS  D  HR   +  +++ E      N+LL+   +AK+ADFG++  ++D    R T
Sbjct: 117 FQQILSAVDYCHRHMVVHRDLKPE------NVLLDAHMNAKIADFGLSNMMSDGEFLR-T 169
Query: 151 VIGTPFWMAPEVIQEIGYDC-VADMWS 176
             G+P + APEVI    Y     D+WS
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWS 196

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 121 NILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T   R T+ GTP ++APEV+  +   GY+   D 
Sbjct: 143 NVLLSSQEEDCLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDC 201
Query: 175 WSL 177
           WSL
Sbjct: 202 WSL 204

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 121 NILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T   R T+ GTP ++APEV+  +   GY+   D 
Sbjct: 144 NVLLSSQEEDCLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 175 WSL 177
           WSL
Sbjct: 203 WSL 205

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 121 NILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T   R T+ GTP ++APEV+  +   GY+   D 
Sbjct: 144 NVLLSSQEEDCLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 175 WSL 177
           WSL
Sbjct: 203 WSL 205

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 121 NILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T   R T+ GTP ++APEV+  +   GY+   D 
Sbjct: 144 NVLLSSQEEDCLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 175 WSL 177
           WSL
Sbjct: 203 WSL 205

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 26  PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
           PS      ++P F  FV +CL +NP+ R +AS +LNH F +
Sbjct: 298 PSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 26  PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
           PS      ++P F  FV +CL +NP+ R +AS +LNH F +
Sbjct: 282 PSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 322

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSL 177
           N+LL+ + + K+ADFG + + T    K +T  G+P + APE+ Q   YD    D+WSL
Sbjct: 144 NLLLDGDMNIKIADFGFSNEFT-VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 200

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 121 NILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T   R T+ GTP ++APEV+  +   GY+   D 
Sbjct: 150 NVLLSSQEEDCLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDC 208
Query: 175 WSL 177
           WSL
Sbjct: 209 WSL 211

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 121 NILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T   R T+ GTP ++APEV+  +   GY+   D 
Sbjct: 283 NVLLSSQEEDCLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDC 341
Query: 175 WSL 177
           WSL
Sbjct: 342 WSL 344

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 121 NILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T   R T+ GTP ++APEV+  +   GY+   D 
Sbjct: 269 NVLLSSQEEDCLIKITDFGHSKILGETSLMR-TLCGTPTYLAPEVLVSVGTAGYNRAVDC 327
Query: 175 WSL 177
           WSL
Sbjct: 328 WSL 330

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHA--KLADFGVAGQLTDTMA 146
            E L++   +++ HR     C +           L + E  A  KL  FGVA QL ++  
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVL-----------LASKENSAPVKLGGFGVAIQLGESGL 190
Query: 147 KRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
                +GTP +MAPEV++   Y    D+W 
Sbjct: 191 VAGGRVGTPHFMAPEVVKREPYGKPVDVWG 220

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 91  FLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNT 150
           F + LS  D  HR   +  +++ E      N+LL+   +AK+ADFG++  ++D    R +
Sbjct: 122 FQQILSGVDYCHRHMVVHRDLKPE------NVLLDAHMNAKIADFGLSNMMSDGEFLRXS 175
Query: 151 VIGTPFWMAPEVIQEIGYDC-VADMWS 176
             G+P + APEVI    Y     D+WS
Sbjct: 176 C-GSPNYAAPEVISGRLYAGPEVDIWS 201

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 89  FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHA--KLADFGVAGQLTDTMA 146
            E L++   +++ HR     C +           L + E  A  KL  FGVA QL ++  
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVL-----------LASKENSAPVKLGGFGVAIQLGESGL 188
Query: 147 KRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
                +GTP +MAPEV++   Y    D+W 
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSL 177
           N+LL+ + + K+ADFG + + T    K +T  G+P + APE+ Q   YD    D+WSL
Sbjct: 143 NLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSL 177
           N+LL+ + + K+ADFG + + T    K +T  G+P + APE+ Q   YD    D+WSL
Sbjct: 143 NLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDC-VADMWSL 177
           N+LL+ + + K+ADFG + + T    K +T  G+P + APE+ Q   YD    D+WSL
Sbjct: 143 NLLLDADMNIKIADFGFSNEFT-FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 199

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	177
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-36
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-35
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-36
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-33
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	7e-36
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-32
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	8e-36
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-34
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-35
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-34
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-34
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	7e-29
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-33
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-33
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-30
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-30
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-30
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-27
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-29
3fme_A	290	Dual specificity mitogen-activated protein kinase;	9e-26
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-29
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-25
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-28
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-17
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-28
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-23
3an0_A	340	Dual specificity mitogen-activated protein kinase;	8e-28
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-25
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-27
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-27
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-25
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-23
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-24
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-23
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-12
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	8e-23
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-13
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-22
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-20
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-22
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-08
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-20
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-19
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-12
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-18
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-16
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-17
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-13
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-16
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-16
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-16
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-06
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	7e-16
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-15
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-15
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-14
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-14
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-14
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-14
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-14
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-07
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-14
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-14
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-14
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-14
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	9e-14
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-13
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-13
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-04
2jo8_A	51	Serine/threonine-protein kinase 4; C-terminal doma	2e-13
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-13
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-13
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-13
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-13
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	5e-13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-13
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	5e-13
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	6e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-13
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	7e-13
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	7e-13
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-13
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-06
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	9e-13
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-12
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-12
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-12
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-12
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-12
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-12
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	4e-12
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-12
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-12
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-11
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-11
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-11
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-11
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	9e-07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-11
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-10
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	8e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-10
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-10
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-10
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-05
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-10
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-10
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-10
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-10
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-10
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-10
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-10
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	6e-10
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	7e-10
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-10
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	7e-09
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-10
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-10
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-06
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	9e-10
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-06
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-09
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-06
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-09
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	8e-08
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-09
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-06
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-09
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-07
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-09
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-09
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-09
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-07
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-07
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	4e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-06
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	6e-09
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	8e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	9e-04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-06
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-08
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-08
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-08
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	6e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	6e-08
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	7e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	6e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-07
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-07
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-07
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-07
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-07
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-07
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-07
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-07
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-07
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	5e-07
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	6e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	6e-07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-07
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-06
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	9e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-06
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-06
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-06
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-06
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-06
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	4e-06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-06
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	7e-06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	8e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	9e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	9e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-05
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-04
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-05
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-05
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-05
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-05
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-05
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-04
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-04
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-04
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	5e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-04
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	8e-04

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  126 bits (319), Expect = 4e-36
 Identities = 45/66 (68%), Positives = 58/66 (87%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEGKPPY DIHPMRAIFMIPT PPP+FR+P++W+  F DFV +CLVK+PE+RATA+++L
Sbjct: 218 MAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLL 277

Query: 61  NHEFIQ 66
            H F++
Sbjct: 278 QHPFVR 283

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  125 bits (315), Expect = 1e-35
 Identities = 55/57 (96%), Positives = 57/57 (100%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY+CVAD+WSL
Sbjct: 155 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSL 211

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  126 bits (318), Expect = 4e-36
 Identities = 26/66 (39%), Positives = 41/66 (62%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MA+ +PP+ +++PMR +  I    PP+   P  W+ EF DF+   L KNPE R +A+++L
Sbjct: 215 MAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLL 274

Query: 61  NHEFIQ 66
            H F+ 
Sbjct: 275 EHPFVS 280

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  119 bits (301), Expect = 1e-33
 Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADMW 175
           N+L+  EG  +LADFGV+ +   T+ KR++ IGTP+WMAPEV+     ++  YD  AD+W
Sbjct: 147 NVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 206

Query: 176 SL 177
           SL
Sbjct: 207 SL 208

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  125 bits (316), Expect = 7e-36
 Identities = 40/57 (70%), Positives = 46/57 (80%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+  G  KLADFGVAGQLTDT  KRNT +GTPFWMAPEVI++  YD  AD+WSL
Sbjct: 149 NVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSL 205

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  116 bits (292), Expect = 3e-32
 Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +A G+PP+ ++HPM+ +F+IP   PP+      ++    +FV  CL K P  R TA E+L
Sbjct: 212 LARGEPPHSELHPMKVLFLIPKNNPPTLEGN--YSKPLKEFVEACLNKEPSFRPTAKELL 269

Query: 61  NHEFIQ 66
            H+FI 
Sbjct: 270 KHKFIL 275

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  125 bits (315), Expect = 8e-36
 Identities = 26/66 (39%), Positives = 45/66 (68%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M EG+PPY + +P+RA+++I T   P  + P+  +  F DF++RCL  + E+R +A E+L
Sbjct: 209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELL 268

Query: 61  NHEFIQ 66
            H+F++
Sbjct: 269 QHQFLK 274

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  122 bits (307), Expect = 2e-34
 Identities = 29/57 (50%), Positives = 38/57 (66%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL  +G  KL DFG   Q+T   +KR+T++GTP+WMAPEV+    Y    D+WSL
Sbjct: 146 NILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  125 bits (316), Expect = 1e-35
 Identities = 26/66 (39%), Positives = 41/66 (62%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M +G+PPY    P++A+  +   PPP  +     +P   DF+ R LV++P+ERATA E+L
Sbjct: 234 MVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELL 293

Query: 61  NHEFIQ 66
           +H F+ 
Sbjct: 294 DHPFLL 299

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  121 bits (306), Expect = 3e-34
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           +ILL  +G  KL+DFG   Q++  + KR +++GTP+WMAPEVI    Y    D+WSL
Sbjct: 171 SILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSL 227

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  121 bits (306), Expect = 6e-34
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +AE KPP  +++ M A++ I     P+ +    W+  F +FV  CL K P++R T+  +L
Sbjct: 246 LAERKPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLL 304

Query: 61  NHEFIQ 66
            H F+ 
Sbjct: 305 KHRFVL 310

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  108 bits (271), Expect = 7e-29
 Identities = 29/60 (48%), Positives = 35/60 (58%), Gaps = 7/60 (11%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---QEIGYDCVADMWSL 177
           NILL+  G  KL DFG A  +       N+ +GTP+WMAPEVI    E  YD   D+WSL
Sbjct: 184 NILLSEPGLVKLGDFGSASIMA----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 239

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  120 bits (302), Expect = 1e-33
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAEG PP  D+HPMRA+F+IP  P P   +   W+ +F  F+  CLVKN  +R    +++
Sbjct: 227 MAEGAPPLCDMHPMRALFLIPRNPAPRL-KSKKWSKKFQSFIESCLVKNHSQRPATEQLM 285

Query: 61  NHEFIQVSP 69
            H FI+  P
Sbjct: 286 KHPFIRDQP 294

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  119 bits (299), Expect = 4e-33
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADMW 175
           N+LL      KL DFGV+ QL  T+ +RNT IGTP+WMAPEVI      +  YD  +D+W
Sbjct: 159 NVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLW 218

Query: 176 SL 177
           SL
Sbjct: 219 SL 220

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  111 bits (280), Expect = 2e-30
 Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 6/63 (9%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDT-----MAKRNTVIGTPFWMAPEVIQEI-GYDCVADM 174
           NILL  +G  ++ADFGV+  L           R T +GTP WMAPEV++++ GYD  AD+
Sbjct: 151 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210

Query: 175 WSL 177
           WS 
Sbjct: 211 WSF 213

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  111 bits (280), Expect = 2e-30
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDV-------WTPEFIDFVSRCLVKNPEER 53
           +A G  PY    PM+ + +     PPS             +   F   +S CL K+PE+R
Sbjct: 220 LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279

Query: 54  ATASEMLNHEFIQ 66
            TA+E+L H+F Q
Sbjct: 280 PTAAELLRHKFFQ 292

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  111 bits (279), Expect = 4e-30
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 5/61 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ----EIGYDCVADMWS 176
           NILL+  G+ KL DFG++GQL D++AK     G   +MAPE I       GYD  +D+WS
Sbjct: 156 NILLDRSGNIKLCDFGISGQLVDSIAKTRDA-GCRPYMAPERIDPSASRQGYDVRSDVWS 214

Query: 177 L 177
           L
Sbjct: 215 L 215

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  103 bits (258), Expect = 4e-27
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 1   MAEGKPPYGDIHPM-RAIFMIPTKPPPSFR--EPDVWTPEFIDFVSRCLVKNPEERATAS 57
           +A G+ PY   + +   +  +    PP     E   ++P FI+FV+ CL K+  +R    
Sbjct: 222 LATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYK 281

Query: 58  EMLNHEFIQ 66
           E+L H FI 
Sbjct: 282 ELLKHPFIL 290

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  107 bits (270), Expect = 4e-29
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 5/61 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI----QEIGYDCVADMWS 176
           N+L+N  G  K+ DFG++G L D +AK +   G   +MAPE I     + GY   +D+WS
Sbjct: 140 NVLINALGQVKMCDFGISGYLVDDVAK-DIDAGCKPYMAPERINPELNQKGYSVKSDIWS 198

Query: 177 L 177
           L
Sbjct: 199 L 199

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 98.9 bits (247), Expect = 9e-26
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 1   MAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +A  + PY     P + +  +  +P P     D ++ EF+DF S+CL KN +ER T  E+
Sbjct: 206 LAILRFPYDSWGTPFQQLKQVVEEPSPQL-PADKFSAEFVDFTSQCLKKNSKERPTYPEL 264

Query: 60  LNHEFIQ 66
           + H F  
Sbjct: 265 MQHPFFT 271

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  107 bits (270), Expect = 9e-29
 Identities = 17/72 (23%), Positives = 24/72 (33%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M  G  P+           I ++PPP    P    P     +   L K P  RA+A E+ 
Sbjct: 249 MLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELR 308

Query: 61  NHEFIQVSPGGN 72
                 +   G 
Sbjct: 309 RKVGKALQEVGG 320

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 99.0 bits (247), Expect = 1e-25
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 121 NILLNTEG-HAKLADFGVAGQLTD-----TMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 174
           N+LL+++G  A L DFG A  L       ++   + + GT   MAPEV+     D   D+
Sbjct: 180 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDI 239

Query: 175 WSL 177
           WS 
Sbjct: 240 WSS 242

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  106 bits (267), Expect = 3e-28
 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL+N+ G  KL DFGV+GQL D+MA  N+ +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 162 NILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSM 216

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 76.4 bits (188), Expect = 4e-17
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 3   EGKPPYGDIHPMRAIF----MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
                  D  P  AIF     I  +PPP      V++ EF DFV++CL+KNP ERA   +
Sbjct: 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKL-PSGVFSLEFQDFVNKCLIKNPAERADLKQ 321

Query: 59  MLNHEFIQ 66
           ++ H FI+
Sbjct: 322 LMVHAFIK 329

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  106 bits (266), Expect = 5e-28
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 9/66 (13%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTV-------IGTPFWMAPEVIQE--IGYDCV 171
           +IL++ +G   L+       +     ++  V       +    W++PEV+Q+   GYD  
Sbjct: 158 HILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAK 217

Query: 172 ADMWSL 177
           +D++S+
Sbjct: 218 SDIYSV 223

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 92.7 bits (230), Expect = 7e-23
 Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 43/109 (39%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPS--------------------------------- 27
           +A G  P+ D+   + +        P                                  
Sbjct: 230 LANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTST 289

Query: 28  ----------FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
                           ++P F  FV +CL +NP+ R +AS +LNH F +
Sbjct: 290 PRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  103 bits (260), Expect = 2e-27
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 1   MAEGKPPYGDIHP-MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +A G+ PY +       +  +  + PP       ++ +F  FV  CL K+  +R   +++
Sbjct: 222 LATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKL 281

Query: 60  LNHEFIQ 66
           L H FI+
Sbjct: 282 LEHSFIK 288

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  103 bits (258), Expect = 3e-27
 Identities = 28/62 (45%), Positives = 36/62 (58%), Gaps = 6/62 (9%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADMW 175
           NILL+  G  KL DFG++G+L D  AK  +  G   +MAPE I      +  YD  AD+W
Sbjct: 155 NILLDERGQIKLCDFGISGRLVDDKAKDRSA-GCAAYMAPERIDPPDPTKPDYDIRADVW 213

Query: 176 SL 177
           SL
Sbjct: 214 SL 215

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 98.1 bits (245), Expect = 2e-25
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 121 NILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSL 177
           N+L+NT  G  K++DFG + +L        T  GT  +MAPE+I     GY   AD+WSL
Sbjct: 152 NVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 93.1 bits (232), Expect = 1e-23
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 1   MAEGKPPYGDI-HPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
           MA GKPP+ ++  P  A+F +   K  P    P+  + E   F+ +C   +P++RA A++
Sbjct: 218 MATGKPPFYELGEPQAAMFKVGMFKVHPEI--PESMSAEAKAFILKCFEPDPDKRACAND 275

Query: 59  MLNHEFIQVSP 69
           +L  EF++VS 
Sbjct: 276 LLVDEFLKVSS 286

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 95.1 bits (237), Expect = 3e-24
 Identities = 20/57 (35%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ +   G  KL D G+    +      ++++GTP++M+PE I E GY+  +D+WSL
Sbjct: 166 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSL 222

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 1   MAEGKPPY-GDIHPMRAIFM-IPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
           MA  + P+ GD   + ++   I     P     D ++ E    V+ C+  +PE+R   + 
Sbjct: 229 MAALQSPFYGDKMNLYSLCKKIEQCDYPPL-PSDHYSEELRQLVNMCINPDPEKRPDVTY 287

Query: 59  MLNHEFIQ 66
           + +     
Sbjct: 288 VYDVAKRM 295

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 94.0 bits (234), Expect = 2e-23
 Identities = 21/57 (36%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI L  +G  +L DFG+A  L  T+      IGTP++++PE+ +   Y+  +D+W+L
Sbjct: 155 NIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWAL 211

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +   K  +        +  I +   P       ++ +    VS+   +NP +R + + +L
Sbjct: 218 LCTLKHAFEAGSMKNLVLKIISGSFPPV--SLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275

Query: 61  NHEFIQ 66
              FI 
Sbjct: 276 EKGFIA 281

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 91.2 bits (227), Expect = 8e-23
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI L   G  KL DFG+  +L  T        G P +MAPE++Q   Y   AD++SL
Sbjct: 187 NIFLGPRGRCKLGDFGLLVELG-TAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSL 241

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 12/66 (18%), Positives = 22/66 (33%), Gaps = 4/66 (6%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +A            + +       PP F      + E    +   L  +P+ RATA  +L
Sbjct: 248 VACNMELPHGGEGWQQLRQG--YLPPEF--TAGLSSELRSVLVMMLEPDPKLRATAEALL 303

Query: 61  NHEFIQ 66
               ++
Sbjct: 304 ALPVLR 309

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 89.7 bits (223), Expect = 3e-22
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MA  + PY +      I+   T          V  PE  + +  C+ +N +ER +  ++L
Sbjct: 222 MATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281

Query: 61  NHEFIQ 66
           NH F Q
Sbjct: 282 NHAFFQ 287

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 83.9 bits (208), Expect = 4e-20
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 4/58 (6%)

Query: 121 NILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI +    G  K+ D G+A     + AK   VIGTP +MAPE+ +E  YD   D+++ 
Sbjct: 161 NIFITGPTGSVKIGDLGLATLKRASFAK--AVIGTPEFMAPEMYEE-KYDESVDVYAF 215

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 89.3 bits (222), Expect = 3e-22
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI L      K+ DFG+   L +   KR    GT  +M+PE I    Y    D+++L
Sbjct: 152 NIFLVDTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYAL 207

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 9/55 (16%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 12  HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
                               D++  +    + + L K PE+R   SE+L    + 
Sbjct: 220 TAFETSKFFTDLRDGII--SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 84.2 bits (209), Expect = 2e-20
 Identities = 21/57 (36%), Positives = 36/57 (63%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ L+ + + KL DFG+A  L    +   T +GTP++M+PE +  + Y+  +D+WSL
Sbjct: 146 NVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 52.7 bits (127), Expect = 6e-09
 Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +    PP+           I          P  ++ E  + ++R L      R +  E+L
Sbjct: 209 LCALMPPFTAFSQKELAGKIREGKFRRI--PYRYSDELNEIITRMLNLKDYHRPSVEEIL 266

Query: 61  NHEFIQ 66
            +  I 
Sbjct: 267 ENPLIL 272

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 82.8 bits (205), Expect = 1e-19
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 15/72 (20%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMA--------------KRNTVIGTPFWMAPEVIQEI 166
           NI ++   + K+ DFG+A  +  ++                  + IGT  ++A EV+   
Sbjct: 146 NIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT 205

Query: 167 G-YDCVADMWSL 177
           G Y+   DM+SL
Sbjct: 206 GHYNEKIDMYSL 217

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 6   PPYG--DIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHE 63
              G   ++ ++ +  +  + PP F   D         +   +  +P +R  A  +LN  
Sbjct: 228 FSTGMERVNILKKLRSVSIEFPPDF--DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285

Query: 64  FIQV 67
           ++ V
Sbjct: 286 WLPV 289

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 77.4 bits (191), Expect = 9e-18
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 24/77 (31%)

Query: 121 NILLNTEGH-------------------AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE 161
           NI ++                        K+ D G   +++          G   ++A E
Sbjct: 145 NIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANE 200

Query: 162 VIQE-IGYDCVADMWSL 177
           V+QE   +   AD+++L
Sbjct: 201 VLQENYTHLPKADIFAL 217

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 73.9 bits (182), Expect = 2e-16
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 5/66 (7%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
            A  +P   +         I     P    P V + EF + +   +  +PE R +A  ++
Sbjct: 224 AAGAEPLPRNGDQW---HEIRQGRLPRI--PQVLSQEFTELLKVMIHPDPERRPSAMALV 278

Query: 61  NHEFIQ 66
            H  + 
Sbjct: 279 KHSVLL 284

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 77.1 bits (190), Expect = 3e-17
 Identities = 11/66 (16%), Positives = 26/66 (39%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           ++EG  P+G     +A  ++                   + + + +  +P++R +A  +L
Sbjct: 223 ISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVL 282

Query: 61  NHEFIQ 66
            H F  
Sbjct: 283 KHPFFW 288

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 66.7 bits (163), Expect = 1e-13
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 11/68 (16%)

Query: 121 NILLNTEGH-----AKLADFGVAGQLTD---TMAKRNTVIGTPFWMAPEVIQEI---GYD 169
           NIL++         A ++DFG+  +L     + ++R+ V GT  W+APE++ E       
Sbjct: 148 NILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPT 207

Query: 170 CVADMWSL 177
              D++S 
Sbjct: 208 YTVDIFSA 215

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 74.7 bits (184), Expect = 2e-16
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 14/70 (20%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIQEIGYDCV------- 171
           N L+  +G  KL DFG+A Q+    T   +++ +GT  +M PE I+++            
Sbjct: 138 NFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 196

Query: 172 ----ADMWSL 177
               +D+WSL
Sbjct: 197 ISPKSDVWSL 206

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 73.2 bits (180), Expect = 5e-16
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 1   MAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           M  GK P+  I + +  +  I   P      PD+   +  D +  CL ++P++R +  E+
Sbjct: 213 MTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 271

Query: 60  LNHEFIQVSP 69
           L H ++Q+  
Sbjct: 272 LAHPYVQIQT 281

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 73.2 bits (180), Expect = 3e-16
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 12/70 (17%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTV------------IGTPFWMAPEVIQEIG 167
            NI    +   K+ DFG+   +     ++  +            +GT  +M+PE I    
Sbjct: 147 SNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS 206

Query: 168 YDCVADMWSL 177
           Y    D++SL
Sbjct: 207 YSHKVDIFSL 216

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 6   PPYGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 64
           P    +  +R +  +   K PP         P     V   L  +P ER  A  ++ +  
Sbjct: 226 PFSTQMERVRTLTDVRNLKFPP---LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAV 282

Query: 65  IQ 66
            +
Sbjct: 283 FE 284

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 73.3 bits (180), Expect = 6e-16
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 14/70 (20%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIQEIGYDCV------- 171
           N L+  +G  KL DFG+A Q+    T   +++ +G   +M PE I+++            
Sbjct: 185 NFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSK 243

Query: 172 ----ADMWSL 177
               +D+WSL
Sbjct: 244 ISPKSDVWSL 253

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 72.9 bits (179), Expect = 7e-16
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 1   MAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           M  GK P+  I + +  +  I   P      PD+   +  D +  CL ++P++R +  E+
Sbjct: 260 MTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 318

Query: 60  LNHEFIQVSP 69
           L H ++Q+  
Sbjct: 319 LAHPYVQIQT 328

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 72.0 bits (177), Expect = 1e-15
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 1   MAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           M  GK P+  I + +  +  I   P      PD+   +  D +  CL ++P++R +  E+
Sbjct: 232 MTYGKTPFQQIINQISKLHAI-IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290

Query: 60  LNHEFIQVSP 69
           L H ++Q+  
Sbjct: 291 LAHPYVQIQT 300

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 14/70 (20%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIQEIGYDCV------- 171
           N L+  +G  KL DFG+A Q+    T   +++ +GT  +M PE I+++            
Sbjct: 157 NFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 215

Query: 172 ----ADMWSL 177
               +D+WSL
Sbjct: 216 ISPKSDVWSL 225

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 69.1 bits (169), Expect = 1e-14
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 12/69 (17%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTV------------IGTPFWMAPEVIQEIGY 168
           NI    +   K+ DFG+   +     ++  +            +GT  +M+PE I    Y
Sbjct: 194 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNY 253

Query: 169 DCVADMWSL 177
               D++SL
Sbjct: 254 SHKVDIFSL 262

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 3/44 (6%)

Query: 23  KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
           K P  F +     P+    V   L  +P ER  A++++ +   +
Sbjct: 290 KFPLLFTQ---KYPQEHMMVQDMLSPSPTERPEATDIIENAIFE 330

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 68.7 bits (169), Expect = 2e-14
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH K+ DFG A  + D      T+ GTP ++APEV+    Y+   D WS 
Sbjct: 136 NILLDKNGHIKITDFGFAKYVPDVT---YTLCGTPDYIAPEVVSTKPYNKSIDWWSF 189

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 68.5 bits (168), Expect = 2e-14
 Identities = 18/57 (31%), Positives = 33/57 (57%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
            N+L++ +   K+ DFG++     T     +  GTP WMAPEV+++   +  +D++S
Sbjct: 168 PNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYS 224

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 68.9 bits (169), Expect = 2e-14
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE---IGYDCVADMWSL 177
           NILL+  GH  + DF +A  L     +  T+ GT  +MAPE+       GY    D WSL
Sbjct: 145 NILLDEHGHVHITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSL 203

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 7/68 (10%)

Query: 1   MAEGKPPY---GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-ATA 56
           +  G+ PY           +    T        P  W+ E +  + + L  NP++R +  
Sbjct: 210 LLRGRRPYHIRSSTSSKEIVHTFETTVV---TYPSAWSQEMVSLLKKLLEPNPDQRFSQL 266

Query: 57  SEMLNHEF 64
           S++ N  +
Sbjct: 267 SDVQNFPY 274

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N+ +GT  +++PE++ E      +D+W+L
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 218

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +     +  +R  + GT  ++ PE+I+   +D   D+WSL
Sbjct: 139 NLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 46.8 bits (112), Expect = 7e-07
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 9/69 (13%)

Query: 1   MAEGKPPYGDIHPM---RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 57
              GKPP+         + I  +    P         T    D +SR L  NP +R    
Sbjct: 200 FLVGKPPFEANTYQETYKRISRVEFTFPDFV------TEGARDLISRLLKHNPSQRPMLR 253

Query: 58  EMLNHEFIQ 66
           E+L H +I 
Sbjct: 254 EVLEHPWIT 262

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L++ +G+ ++ DFG A ++        T+ GTP  +APE+I   GY+   D W+L
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGRT---WTLCGTPEALAPEIILSKGYNKAVDWWAL 224

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 67.6 bits (166), Expect = 4e-14
 Identities = 26/57 (45%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ EGH KL DFG++ +  D   K  +  GT  +MAPEV+   G+   AD WS 
Sbjct: 156 NILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 68.3 bits (167), Expect = 4e-14
 Identities = 20/57 (35%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ +G+ +++D G+A +L     K     GTP +MAPE++    YD   D ++L
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFAL 375

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 67.6 bits (166), Expect = 4e-14
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+LN +GH KL DFG+  +        +T  GT  +MAPE++   G++   D WSL
Sbjct: 151 NIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSL 207

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 66.4 bits (163), Expect = 9e-14
 Identities = 19/57 (33%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++  + GTP ++APEV+ + G+    D+WS+
Sbjct: 145 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 201

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 40.6 bits (96), Expect = 8e-05
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPP 78
           +  P    P     + + L  +P  R T +E+LN EF      G IP   P
Sbjct: 232 YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS---GYIPARLP 279

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 66.4 bits (162), Expect = 2e-13
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+  GH +++D G+A  + +        +GT  +MAPEV++   Y    D W+L
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 66.2 bits (162), Expect = 2e-13
 Identities = 19/57 (33%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ LN +   K+ DFG+A ++     ++  + GTP ++APEV+ + G+    D+WS+
Sbjct: 171 NLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 227

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPP 78
           +  P    P     + + L  +P  R T +E+LN EF      G IP   P
Sbjct: 258 YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS---GYIPARLP 305

>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens} Length = 51

 Score = 60.7 bits (147), Expect = 2e-13
 Identities = 17/33 (51%), Positives = 25/33 (75%)

Query: 88  DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRR 120
           D+EFLK  + +DLQ R+  LD  ME+EIE++R+
Sbjct: 3   DYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQ 35

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 65.4 bits (160), Expect = 3e-13
 Identities = 23/57 (40%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+++GH  L DFG+  +  +  +  +T  GTP ++APEV+ +  YD   D W L
Sbjct: 169 NILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCL 225

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 64.5 bits (158), Expect = 4e-13
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL    + K+ADFG+A QL     K  T+ GTP +++PE+     +   +D+WSL
Sbjct: 142 NLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSL 198

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 9/66 (13%)

Query: 4   GKPPYGDIHPM---RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           G+PP+           + +   + P         + E  D + + L +NP +R + S +L
Sbjct: 208 GRPPFDTDTVKNTLNKVVLADYEMPSFL------SIEAKDLIHQLLRRNPADRLSLSSVL 261

Query: 61  NHEFIQ 66
           +H F+ 
Sbjct: 262 DHPFMS 267

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 65.5 bits (159), Expect = 4e-13
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+L         K+ D G A +L          +GT  ++APE++++  Y    D WS 
Sbjct: 151 NIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 65.1 bits (159), Expect = 5e-13
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 279 NLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 335

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 65.1 bits (159), Expect = 5e-13
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++EGH KL D+G+  +        +T  GTP ++APE+++   Y    D W+L
Sbjct: 183 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 239

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 64.6 bits (158), Expect = 5e-13
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL++EGH KL D+G+  +        +T  GTP ++APE+++   Y    D W+L
Sbjct: 140 NVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 196

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 65.0 bits (158), Expect = 5e-13
 Identities = 21/57 (36%), Positives = 32/57 (56%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L++EGH K+ADFG+  +         T  GTP ++APE+I    Y    D W+ 
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAF 528

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 64.2 bits (157), Expect = 5e-13
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L+  +G  K+ADFG +        +R T+ GT  ++ PE+I+   +D   D+W  
Sbjct: 144 NLLMGYKGELKIADFGWSVHAPSL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCA 198

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 47.2 bits (113), Expect = 6e-07
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 4   GKPPYGDIHPM---RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           G PP+         R I  +  K PP        +    D +S+ L  +P +R     ++
Sbjct: 208 GMPPFDSPSHTETHRRIVNVDLKFPPFL------SDGSKDLISKLLRYHPPQRLPLKGVM 261

Query: 61  NHEFIQVSPGGNIPPGPP 78
            H +++ +    +PP   
Sbjct: 262 EHPWVKANSRRVLPPVYQ 279

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 64.5 bits (158), Expect = 6e-13
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 64.3 bits (157), Expect = 6e-13
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 120 RNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
            N+LL   G   K+ DFG A  +   M       G+  WMAPEV +   Y    D++S
Sbjct: 134 PNLLLVAGGTVLKICDFGTACDIQTHM---TNNKGSAAWMAPEVFEGSNYSEKCDVFS 188

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 64.2 bits (157), Expect = 7e-13
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL+ EGH KLADFG+  +         T  GTP ++APE++QE+ Y    D W++
Sbjct: 154 NVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAM 210

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 64.2 bits (157), Expect = 7e-13
 Identities = 21/57 (36%), Positives = 32/57 (56%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N++L++EGH K+ADFG+  +         T  GTP ++APE+I    Y    D W+ 
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAF 207

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 64.2 bits (157), Expect = 8e-13
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            +LL ++ ++   KL  FGVA QL ++       +GTP +MAPEV++   Y    D+W  
Sbjct: 160 CVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGC 219

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 26  PSFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
                   W   +    D V R L+ +P ER T  E LNH +++
Sbjct: 249 YKMNPRQ-WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 63.8 bits (156), Expect = 9e-13
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVA-GQLTDTMAKRNTVIGTPFWMAPEVIQEI--GYDCVADMWSL 177
           NILL++ GH  L DFG++   + D   +     GT  +MAP++++    G+D   D WSL
Sbjct: 189 NILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 248

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 64.0 bits (156), Expect = 1e-12
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)

Query: 121 NILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPFWMAPEVIQEI-----GYDCVADM 174
           NIL++  GH +LADFG   +L  D   + +  +GTP +++PE++Q +      Y    D 
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264

Query: 175 WSL 177
           WSL
Sbjct: 265 WSL 267

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 63.0 bits (154), Expect = 2e-12
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 8/60 (13%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV---ADMWS 176
           R+++++ +  A+++   V              +  P W+APE +Q+   D     ADMWS
Sbjct: 142 RSVMIDEDMTARISMADVKFSFQSP-----GRMYAPAWVAPEALQKKPEDTNRRSADMWS 196

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 10/68 (14%)

Query: 120 RNILLNTEGHAKLADFGVA----GQLTDTMAKRNTVIGTPFWMAPEVIQE------IGYD 169
           +NIL+   G   +AD G+A              N  +GT  +MAPEV+ E          
Sbjct: 142 KNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSY 201

Query: 170 CVADMWSL 177
              D+W+ 
Sbjct: 202 KRVDIWAF 209

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 63.1 bits (154), Expect = 2e-12
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 121 NILLNTEGHA----KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           NIL   E       ++ DFG A QL        T   T  ++APEV++  GYD   D+WS
Sbjct: 146 NILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWS 205

Query: 177 L 177
           L
Sbjct: 206 L 206

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQ 66
           D VS+ L  +P +R TA+ +L H +I 
Sbjct: 256 DLVSKMLHVDPHQRLTAALVLRHPWIV 282

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKR-NTVIGTPFWMAPEVIQEIG----YDCVADMW 175
           N+LL+  GH KLADFG   ++      R +T +GTP +++PEV++  G    Y    D W
Sbjct: 198 NMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 257

Query: 176 SL 177
           S+
Sbjct: 258 SV 259

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 63.2 bits (154), Expect = 2e-12
 Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 8/65 (12%)

Query: 121 NILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPFWMAPEVIQEIG-------YDCVA 172
           NILL+  GH +LADFG   +L  D   +    +GTP +++PE++Q +G       Y    
Sbjct: 192 NILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPEC 251

Query: 173 DMWSL 177
           D W+L
Sbjct: 252 DWWAL 256

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 63.4 bits (154), Expect = 2e-12
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSL 177
           NILL+  GH +++D G+A   +    K +  +GT  +MAPEV+Q  + YD  AD +SL
Sbjct: 322 NILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 62.7 bits (153), Expect = 3e-12
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L   E      K+ DFG A           T   T  + APE++ + GYD   D+WSL
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSL 195

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 7/27 (25%), Positives = 14/27 (51%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQ 66
           D +   L  +P +R   S +  +E++Q
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYNEWLQ 275

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 62.2 bits (152), Expect = 3e-12
 Identities = 25/57 (43%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL+ +GH K+ADFG+  +     AK NT  GTP ++APE++    Y+   D WS 
Sbjct: 148 NILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSF 204

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 62.1 bits (151), Expect = 4e-12
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSL 177
           NIL++  G  KL+DFG +  + D   K     GT  +M PE             D+WSL
Sbjct: 182 NILMDKNGRVKLSDFGESEYMVD--KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 17/80 (21%), Positives = 24/80 (30%), Gaps = 17/80 (21%)

Query: 4   GKPP-YGDIHPM-------RAIFMIPTKPPPSFREPDVW---------TPEFIDFVSRCL 46
              P    I  +             P                      + E IDF+   L
Sbjct: 248 NVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFL 307

Query: 47  VKNPEERATASEMLNHEFIQ 66
            KNP ER T+ + L HE++ 
Sbjct: 308 RKNPAERITSEDALKHEWLA 327

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 61.2 bits (149), Expect = 7e-12
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 14/71 (19%)

Query: 120 RNILLNTEGHAKLADFGVA--------------GQLTDTMAKRNTVIGTPFWMAPEVIQE 165
            N L+    +  +ADFG+A                      KR TV+G P+WMAPE+I  
Sbjct: 137 HNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING 196

Query: 166 IGYDCVADMWS 176
             YD   D++S
Sbjct: 197 RSYDEKVDVFS 207

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 10/68 (14%)

Query: 120 RNILLNTEGHAKLADFGVA----GQLTDTMAKRNTVIGTPFWMAPEVIQEIG------YD 169
           +NIL+   G   +AD G+A        +     NT +GT  +M PEV+ E          
Sbjct: 171 KNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY 230

Query: 170 CVADMWSL 177
            +ADM+S 
Sbjct: 231 IMADMYSF 238

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 60.4 bits (147), Expect = 2e-11
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 121 NILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL ++      KLADFG+A ++           GTP +++PEV+++  Y    D+W+ 
Sbjct: 140 NLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 199

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 27  SFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
            F  P+ W   TPE  D +++ L  NP +R TA+E L H +I 
Sbjct: 231 DFPSPE-WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 10/64 (15%)

Query: 120 RNILLNTEG-----HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI--QEIGYDCVA 172
            NI L +        AK+ADFG++ Q   ++   + ++G   WMAPE I  +E  Y   A
Sbjct: 153 PNIFLQSLDENAPVCAKVADFGLSQQSVHSV---SGLLGNFQWMAPETIGAEEESYTEKA 209

Query: 173 DMWS 176
           D +S
Sbjct: 210 DTYS 213

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 59.7 bits (145), Expect = 3e-11
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L  ++      KL DFG A + T    +  T   TP+++APEV+    YD   DMWSL
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETTQNALQ--TPCYTPYYVAPEVLGPEKYDKSCDMWSL 215

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 7/69 (10%)

Query: 4   GKPPYGDIHPMR---AIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 57
           G PP+           +          F  P+ W   + +    +   L  +P ER T +
Sbjct: 225 GFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE-WSEVSEDAKQLIRLLLKTDPTERLTIT 283

Query: 58  EMLNHEFIQ 66
           + +NH +I 
Sbjct: 284 QFMNHPWIN 292

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 59.4 bits (144), Expect = 3e-11
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 120 RNILLNTEGHAKLADFGVA----GQLTDTMAKRNTVIGTPFWMAPEVIQEIG------YD 169
           +NIL+   G   +AD G+A              N  +GT  +MAPEV+ +          
Sbjct: 176 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 235

Query: 170 CVADMWSL 177
             AD++++
Sbjct: 236 KRADIYAM 243

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 59.4 bits (144), Expect = 4e-11
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 13/69 (18%)

Query: 121 NILLNTEGHA----KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI--------GY 168
           NI+           KL DFG A +L D   +  ++ GT  ++ P++ +           Y
Sbjct: 142 NIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200

Query: 169 DCVADMWSL 177
               D+WS+
Sbjct: 201 GATVDLWSI 209

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 59.1 bits (144), Expect = 4e-11
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)

Query: 121 NILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL ++      KLADFG+A ++ D+    +   GTP +++PEV+++  Y    D+W+ 
Sbjct: 135 NLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 44.5 bits (106), Expect = 5e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)

Query: 27  SFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
            +  P+ W   TPE    +   L  NP++R TA + L   +I 
Sbjct: 225 DYPSPE-WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 266

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 59.3 bits (144), Expect = 5e-11
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 4/60 (6%)

Query: 121 NILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL ++      KLADFG+A ++ D+    +   GTP +++PEV+++  Y    D+W+ 
Sbjct: 158 NLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 216

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 4/43 (9%)

Query: 27  SFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
            +  P+ W   TPE    +   L  NP++R TA + L   +I 
Sbjct: 248 DYPSPE-WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 289

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 59.3 bits (143), Expect = 5e-11
 Identities = 11/68 (16%), Positives = 19/68 (27%), Gaps = 15/68 (22%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----------EIGYD 169
           +I+L+  G   L  F    +       R     +  +  PE+                  
Sbjct: 236 DIVLDQRGGVFLTGFEHLVRDG----ARVVSSVSRGFEPPELEARRATISYHRDRRTLMT 291

Query: 170 CVADMWSL 177
              D W+L
Sbjct: 292 FSFDAWAL 299

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 46.9 bits (111), Expect = 9e-07
 Identities = 7/63 (11%), Positives = 13/63 (20%), Gaps = 7/63 (11%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHE 63
              P      +     I       FR            +   L    E+R    + +   
Sbjct: 309 ADLPITKDAALGGSEWI-------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETP 361

Query: 64  FIQ 66
             +
Sbjct: 362 EYE 364

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 59.1 bits (143), Expect = 5e-11
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 13/69 (18%)

Query: 121 NILLNTEGHA----KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI--------GY 168
           NI+           KL DFG A +L D   +  ++ GT  ++ P++ +           Y
Sbjct: 142 NIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200

Query: 169 DCVADMWSL 177
               D+WS+
Sbjct: 201 GATVDLWSI 209

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 58.6 bits (142), Expect = 7e-11
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)

Query: 120 RNILLNTEGHAKLADFGVA--GQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVA 172
           +N+LL     A +ADFG+A   +   +    +  +GT  +MAPEV++     +       
Sbjct: 160 KNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRI 219

Query: 173 DMWSL 177
           DM+++
Sbjct: 220 DMYAM 224

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 58.3 bits (141), Expect = 1e-10
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 121 NILLNTEGHA--KLADFGVA----GQLTDTMAKRNTVIGTPFWMAPEVIQEIG--YDCVA 172
           N L +T      KL DFG++               T  GTP+++APEV+      Y    
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257

Query: 173 DMWSL 177
           D WS 
Sbjct: 258 DAWSA 262

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 49.8 bits (119), Expect = 8e-08
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 11/69 (15%)

Query: 4   GKPP-YGDIHP--MRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 57
           G  P  G      +  +          F  P+ +   +P   D +S  L +N +ER  A 
Sbjct: 272 GAVPFPGVNDADTISQV----LNKKLCFENPN-YNVLSPLARDLLSNLLNRNVDERFDAM 326

Query: 58  EMLNHEFIQ 66
             L H +I 
Sbjct: 327 RALQHPWIS 335

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 12/69 (17%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVI---------GTPFWMAPEVIQEIGYDCV 171
           NILL  EG   L D G   Q    +      +          T  + APE+     +  +
Sbjct: 164 NILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI 223

Query: 172 ---ADMWSL 177
               D+WSL
Sbjct: 224 DERTDVWSL 232

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 8/83 (9%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M  G+ PY  +        +  +   S  +    +      ++  +  +P +R     +L
Sbjct: 239 MMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLL 298

Query: 61  NH-EFIQVSPGGNIPPGPPGAPS 82
           +  E +Q       PP P    +
Sbjct: 299 SQLEALQ-------PPAPGQHTT 314

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)

Query: 121 NILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L  T        + DFG++    + +    T  GTP ++APEV+ +  Y    D WS+
Sbjct: 136 NLLYLTPEENSKIMITDFGLSKMEQNGIMS--TACGTPGYVAPEVLAQKPYSKAVDCWSI 193

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQ 66
           DF+   L K+P ER T  + L+H +I 
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWID 266

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 120 RNILLNTEGHAKLADFGVAG--QLTDTMAKRNTVIGTPFWMAPEVIQEIG---YDCVADM 174
            NI L+ +   K+ DFG+A          +   + G+  WMAPEVI+      Y   +D+
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 208

Query: 175 WS 176
           ++
Sbjct: 209 YA 210

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI--GYD-CVADMWSL 177
           N+L+  +GH K+ADFGV+ +   + A  +  +GTP +MAPE + E    +     D+W++
Sbjct: 167 NLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 8/52 (15%)

Query: 15  RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
                 P +P  +         +  D ++R L KNPE R    E+  H ++ 
Sbjct: 254 SQALEFPDQPDIA--------EDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L  ++      KL DFG A + T       T   TP+++APEV+    YD   DMWSL
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 4   GKPPYGDIHPMR---AIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 57
           G PP+   H +     +          F  P+ W   + E    +   L   P +R T +
Sbjct: 259 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE-WSEVSEEVKMLIRNLLKTEPTQRMTIT 317

Query: 58  EMLNHEFIQ 66
           E +NH +I 
Sbjct: 318 EFMNHPWIM 326

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 121 NILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+L  T       K+ADFG++  +        TV GTP + APE+++   Y    DMWS+
Sbjct: 178 NLLYATPAPDAPLKIADFGLSKIVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSV 236

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEML 60
           G  P+ D    + +F         F  P  W   +    D V + +V +P++R T  + L
Sbjct: 246 GFEPFYDERGDQFMFRRILNCEYYFISPW-WDEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304

Query: 61  NHEFIQ 66
            H ++ 
Sbjct: 305 QHPWVT 310

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 121 NILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+  T   +  K+ +FG A QL         +   P + APEV Q        DMWSL
Sbjct: 132 NIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 4   GKPP-YGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEM 59
           G  P   + +  + I         +F E   +   + E +DFV R LVK  + R TASE 
Sbjct: 199 GINPFLAETN--QQIIENIMNAEYTFDEEA-FKEISIEAMDFVDRLLVKERKSRMTASEA 255

Query: 60  LNHEFIQ 66
           L H +++
Sbjct: 256 LQHPWLK 262

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 10/65 (15%)

Query: 120 RNILLNTEGH--------AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV 171
            NIL+  +           K+ DFG+A +   T     +  G   WMAPEVI+   +   
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLAREWHRTTKM--SAAGAYAWMAPEVIRASMFSKG 194

Query: 172 ADMWS 176
           +D+WS
Sbjct: 195 SDVWS 199

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)

Query: 121 NILLNTEGHA----KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           NI+L  +       KL DFG+A ++     +   + GTP ++APE++        ADMWS
Sbjct: 138 NIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 196

Query: 177 L 177
           +
Sbjct: 197 I 197

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPP 75
           DF+ R LVK+P+ R T ++ L H +I+     N+  
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRG 279

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 7/63 (11%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI------GYDCVADM 174
           NILL+ + + KL DFG + QL     K   V GTP ++APE+I+        GY    DM
Sbjct: 154 NILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDM 212

Query: 175 WSL 177
           WS 
Sbjct: 213 WST 215

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 27  SFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPP 75
            F  P+ W   +    D VSR LV  P++R TA E L H F Q      +  
Sbjct: 247 QFGSPE-WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEVRH 297

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 56.6 bits (137), Expect = 4e-10
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 121 NILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+  T+  +  K+ DFG+A +L            T  + APE++         DMW++
Sbjct: 179 NIMCETKKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAI 236

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 4/43 (9%)

Query: 27  SFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
            F E   +   +PE  DF+   L K P +R T  + L H +++
Sbjct: 268 EFDEDA-FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 56.1 bits (136), Expect = 5e-10
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)

Query: 121 NILL-NTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           NI+L +        KL DFG+A ++ D   +   + GTP ++APE++        ADMWS
Sbjct: 145 NIMLLDKNIPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203

Query: 177 L 177
           +
Sbjct: 204 I 204

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPP 75
           DF+ + LVK   +R T  E L H +I          
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMV 286

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 56.3 bits (136), Expect = 5e-10
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 1   MAEGKPPYGD-IHPMRAIFM-IPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE 58
           +++GK P+GD       I   I +              E  D +S+ +  +P +R TA +
Sbjct: 233 LSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292

Query: 59  MLNHEFIQ 66
           +L H    
Sbjct: 293 VLRHPLFW 300

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 54.4 bits (131), Expect = 3e-09
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 24/81 (29%)

Query: 121 NILLNTEGH-------------AKLADFGVAGQLTDTM----AKRNTVIGTPFWMAPEVI 163
           NIL++T                  ++DFG+  +L           N   GT  W APE++
Sbjct: 145 NILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL 204

Query: 164 QEI-------GYDCVADMWSL 177
           +E              D++S+
Sbjct: 205 EESNNLQTKRRLTRSIDIFSM 225

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 56.1 bits (136), Expect = 6e-10
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 121 NILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL++    G  K+ DFG++ ++     +   ++GTP ++APE++         DMW++
Sbjct: 161 NILLSSIYPLGDIKIVDFGMSRKIGHA-CELREIMGTPEYLAPEILNYDPITTATDMWNI 219

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)

Query: 27  SFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
            + E   +   +    DF+   LVKNPE+R TA   L+H ++Q
Sbjct: 251 DYSEET-FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 55.9 bits (135), Expect = 6e-10
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVADM 174
           NILL+     +L+DFG +  L     K   + GTP ++APE+++        GY    D+
Sbjct: 230 NILLDDNMQIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288

Query: 175 WSL 177
           W+ 
Sbjct: 289 WAC 291

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)

Query: 26  PSFREPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
             F  P+ W   +    D +SR L  +PE R TA + L H F +
Sbjct: 322 YQFSSPE-WDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 55.9 bits (135), Expect = 6e-10
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 121 NILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T +   T+ GTP ++APEV+  +   GY+   D 
Sbjct: 269 NVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 327

Query: 175 WSL 177
           WSL
Sbjct: 328 WSL 330

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 30  EPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
            P+VW   + + +D V + LV +P+ R T  E L H ++Q
Sbjct: 365 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 55.8 bits (135), Expect = 7e-10
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)

Query: 121 NILL-NTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           NI+L +        KL DFG+A ++ D   +   + GTP ++APE++        ADMWS
Sbjct: 145 NIMLLDKNIPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203

Query: 177 L 177
           +
Sbjct: 204 I 204

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPP 75
           DF+ + LVK   +R T  E L H +I          
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMV 286

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 55.8 bits (134), Expect = 8e-10
 Identities = 7/59 (11%), Positives = 17/59 (28%), Gaps = 5/59 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--EIGYDCVADMWSL 177
           N+ +  +G   L D     ++     +         +   E +      +    + W L
Sbjct: 224 NLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQL 279

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 53.1 bits (127), Expect = 7e-09
 Identities = 10/69 (14%), Positives = 17/69 (24%), Gaps = 6/69 (8%)

Query: 4   GKPPYGDIHPM------RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 57
              P+G + P       R    +P     +F             + R L  +   R    
Sbjct: 289 LFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPL 348

Query: 58  EMLNHEFIQ 66
           E +      
Sbjct: 349 EAMETPEFL 357

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 55.6 bits (134), Expect = 8e-10
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 121 NILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+  T+     KL DFG+   L           GT  + APEV +        DMWS+
Sbjct: 285 NIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 342

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQ 66
           DF+ + L+ +P  R T  + L H ++ 
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWLT 415

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 55.4 bits (133), Expect = 9e-10
 Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 6/63 (9%)

Query: 121 NILLNTEGHAKLADFGVAGQL-TDTMAKRNTVIGTPFWMAPEVI-----QEIGYDCVADM 174
           +I+L+  G   L  F    +     ++        P   A  ++              D 
Sbjct: 241 DIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDT 300

Query: 175 WSL 177
           W+L
Sbjct: 301 WTL 303

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 13/103 (12%), Positives = 21/103 (20%), Gaps = 25/103 (24%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +     P  D   +     I       FR            +   L    E+R    + +
Sbjct: 310 IWCADLPNTDDAALGGSEWI-------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362

Query: 61  NHEFIQ------------------VSPGGNIPPGPPGAPSGGG 85
                +                   +  G  PP     P   G
Sbjct: 363 ETPEYEQLRTELSAALPLYQTDGEPTREGGAPPSGTSQPDEAG 405

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 55.3 bits (134), Expect = 9e-10
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 121 NILLNTEGHA----KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           NI+L          K+ DFG+A ++     +   + GTP ++APE++        ADMWS
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202

Query: 177 L 177
           +
Sbjct: 203 I 203

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 12/27 (44%), Positives = 19/27 (70%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQ 66
           DF+ R LVK+P++R T  + L H +I+
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 121 NILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYDCVADM 174
           N+LL+++      K+ DFG +  L +T +   T+ GTP ++APEV+  +   GY+   D 
Sbjct: 144 NVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202

Query: 175 WSL 177
           WSL
Sbjct: 203 WSL 205

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 30  EPDVW---TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
            P+VW   + + +D V + LV +P+ R T  E L H ++Q
Sbjct: 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 36  PEFIDFVSRCLVKNPEERATASEMLNHEFIQ--VSPGGNIPPGPPGAPSGGG 85
            E  DF+S  L  +P +RA A  ++NH +++  +       P      SG  
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSD 359

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 9/63 (14%)

Query: 121 NILLNTEGHA------KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 174
           N+L+            K+AD G A    +        I T  + +PEV+    + C AD+
Sbjct: 162 NVLMEIVDSPENLIQIKIADLGNACWYDEHY---TNSIQTREYRSPEVLLGAPWGCGADI 218

Query: 175 WSL 177
           WS 
Sbjct: 219 WST 221

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 8/54 (14%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKR--------NTVIGTPFWMAPEVIQE 165
           RN+L+  +G   ++DFG++ +LT     R         + +GT  +MAPEV++ 
Sbjct: 149 RNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 121 NILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL         K+ DFG+A +      K     GTP ++APEV+         DMWS+
Sbjct: 217 NILCVNRDAKQIKIIDFGLARRYKPR-EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSV 274

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 44.3 bits (105), Expect = 5e-06
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQ 66
           +F+S+ L+K    R +ASE L H ++ 
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLS 347

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 121 NILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL ++      K+ DFG++        K    IGT +++APEV++   YD   D+WS 
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSA 208

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 4   GKPP-YGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEM 59
           G PP YG       I         +F  P  W   + +  D + + L  +P  R TA++ 
Sbjct: 218 GTPPFYGKNE--YDILKRVETGKYAFDLPQ-WRTISDDAKDLIRKMLTFHPSLRITATQC 274

Query: 60  LNHEFIQ 66
           L H +IQ
Sbjct: 275 LEHPWIQ 281

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 121 NILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL +   +   K+ DFG++        K    IGT +++APEV++   YD   D+WS 
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSA 208

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEML 60
           G PP+        I         +F  P  W   + +  D + + L  +P  R TA++ L
Sbjct: 218 GTPPFYG-KNEYDILKRVETGKYAFDLPQ-WRTISDDAKDLIRKMLTFHPSLRITATQCL 275

Query: 61  NHEFIQ 66
            H +IQ
Sbjct: 276 EHPWIQ 281

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 121 NILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL       + K+ DFG++   +    K    +GT +++APEV+++  Y+   D+WS 
Sbjct: 176 NILLENKNSLLNIKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSC 233

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 5/66 (7%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEML 60
           G PP+G     + I     K    F   D W   + E  + +   L  +  +R TA E L
Sbjct: 243 GYPPFGG-QNDQDIIKKVEKGKYYFDFND-WKNISDEAKELIKLMLTYDYNKRCTAEEAL 300

Query: 61  NHEFIQ 66
           N  +I+
Sbjct: 301 NSRWIK 306

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCV-ADMWSL 177
           NI++  +   KL DFG A  L        T  GT  + APEV+    Y     +MWSL
Sbjct: 160 NIVIAEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSL 216

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 12/102 (11%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFC 87
              P + + E +  VS  L   PE R T  +++   ++      N+              
Sbjct: 241 IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVT--QPVNLADYTWEEVFRVNKP 298

Query: 88  DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH 129
           +   L   S          L+       +  +   L   EGH
Sbjct: 299 ESGVLSAAS----------LEMGNRSLSDVAQAQELCGGEGH 330

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)

Query: 121 NILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD-CVADMWSL 177
           NIL++   G  KL DFG    L DT+       GT  +  PE I+   Y    A +WSL
Sbjct: 179 NILIDLNRGELKLIDFGSGALLKDTVYT--DFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 3/48 (6%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPP 75
                  + E    +  CL   P +R T  E+ NH ++Q      +P 
Sbjct: 260 VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ---DVLLPQ 304

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 121 NILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL     +  K+ DFG + QL   +      I + F+ +PEV+  + YD   DMWSL
Sbjct: 189 NILLCNPKRSAIKIVDFGSSCQLGQRI---YQYIQSRFYRSPEVLLGMPYDLAIDMWSL 244

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 37  EFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
           +F D + R L  +P+ R      L H F +
Sbjct: 348 KFKDLILRMLDYDPKTRIQPYYALQHSFFK 377

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 5/60 (8%)

Query: 121 NILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL +   +   K+ DFG++    +   K    +GT +++APEV+++  YD   D+WS+
Sbjct: 166 NLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYIAPEVLRK-KYDEKCDVWSI 223

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEML 60
           G PP+G     + I     K   +F  P+ W   +    D + + L  + + R +A + L
Sbjct: 233 GYPPFGGQTD-QEILRKVEKGKYTFDSPE-WKNVSEGAKDLIKQMLQFDSQRRISAQQAL 290

Query: 61  NHEFIQ 66
            H +I+
Sbjct: 291 EHPWIK 296

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 53.4 bits (129), Expect = 4e-09
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYD-CVADMWSL 177
           N+LL+   + K++DFG+A        +R  N + GT  ++APE+++   +     D+WS 
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 53.4 bits (129), Expect = 4e-09
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N L  T+      KL DFG+A +         T +GTP++++P+V++   Y    D WS 
Sbjct: 136 NFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSA 193

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 7/67 (10%)

Query: 4   GKPP-YGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEM 59
           G PP          + +   +   +F E D W   +P+    + R L K+P++R T+ + 
Sbjct: 203 GYPPFSAPTDS--EVMLKIREGTFTFPEKD-WLNVSPQAESLIRRLLTKSPKQRITSLQA 259

Query: 60  LNHEFIQ 66
           L HE+ +
Sbjct: 260 LEHEWFE 266

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 53.5 bits (129), Expect = 5e-09
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 121 NILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL +   + + ++ DFG++     +  K    IGT +++APEV+    YD   D+WS 
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 213

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 5/78 (6%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATASEML 60
           G PP+   +    I     K   +F  P  W   +    D + + L   P  R +A + L
Sbjct: 223 GCPPFNGANE-YDILKKVEKGKYTFELPQ-WKKVSESAKDLIRKMLTYVPSMRISARDAL 280

Query: 61  NHEFIQVSPGGNIPPGPP 78
           +HE+IQ      I    P
Sbjct: 281 DHEWIQTYTKEQISVDVP 298

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 53.0 bits (128), Expect = 5e-09
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL          K+ DFG+A              GT  +MAPEV +        D+WS 
Sbjct: 154 NILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVFKR-DVTFKCDIWSA 211

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 4   GKPP-YGDIHPMRAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLN 61
           G  P  G       +    T   P++  E    TP+ +D + + L K+PE R +A+++L+
Sbjct: 221 GCLPFTGTSLE--EVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278

Query: 62  HEFIQ 66
           HE+ +
Sbjct: 279 HEWFK 283

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 53.1 bits (128), Expect = 6e-09
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 121 NILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD-CVADMWSL 177
           NIL++   G AKL DFG    L D         GT  +  PE I    Y    A +WSL
Sbjct: 169 NILIDLRRGCAKLIDFGSGALLHDEPYT--DFDGTRVYSPPEWISRHQYHALPATVWSL 225

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 12/55 (21%), Positives = 20/55 (36%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPS 82
              P   +P+    + RCL   P  R +  E+L   ++Q            G P+
Sbjct: 250 LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKGGPA 304

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 53.1 bits (128), Expect = 6e-09
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYD-CVADMWSL 177
           N+LL+   + K++DFG+A        +R  N + GT  ++APE+++   +     D+WS 
Sbjct: 135 NLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSC 194

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 53.1 bits (127), Expect = 6e-09
 Identities = 8/70 (11%), Positives = 18/70 (25%), Gaps = 13/70 (18%)

Query: 121 NILLNT-----------EGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEIG 167
           N +L                  L D G +  +              T  +   E++    
Sbjct: 202 NFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKP 261

Query: 168 YDCVADMWSL 177
           ++   D + +
Sbjct: 262 WNYQIDYFGV 271

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 52.6 bits (127), Expect = 8e-09
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL++ +  A L DFG+A   TD  + +    +GT ++MAPE   E      AD+++L
Sbjct: 164 NILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYAL 221

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 37.6 bits (88), Expect = 9e-04
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 24  PPPSFREPDVWTPEFIDFVSRCLVKNPEER-ATASEML 60
           P PS   P +    F   ++R + KNPE+R  T  ++ 
Sbjct: 252 PRPSTVRPGI-PVAFDAVIARGMAKNPEDRYVTCGDLS 288

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 5/59 (8%)

Query: 121 NILLNTEGHA--KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILL  +G +  K+ DFG +      +    T I + F+ APEVI    Y    DMWSL
Sbjct: 230 NILLKQQGRSGIKVIDFGSSCYEHQRV---YTYIQSRFYRAPEVILGARYGMPIDMWSL 285

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 4/47 (8%)

Query: 36  PEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPS 82
           P F+DF+ +CL  +P  R T  + L H +++      +P  P G  +
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLR----RRLPKPPTGEKT 425

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 15/72 (20%)

Query: 121 NILLNTEGHA---KLADFGVAGQLTDTMAKR-------NTVIGTPFWMAPEVI-----QE 165
           NIL          K+ DF +   +               T  G+  +MAPEV+     + 
Sbjct: 141 NILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEA 200

Query: 166 IGYDCVADMWSL 177
             YD   D+WSL
Sbjct: 201 SIYDKRCDLWSL 212

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 9/27 (33%), Positives = 21/27 (77%)

Query: 40  DFVSRCLVKNPEERATASEMLNHEFIQ 66
           D +S+ LV++ ++R +A+++L H ++Q
Sbjct: 274 DLISKLLVRDAKQRLSAAQVLQHPWVQ 300

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 15/72 (20%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRN------------TVIGTPFWMAPEVI---QE 165
           N+LL+ +G  KL DFG A  ++                   T   TP +  PE+I     
Sbjct: 168 NLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN 227

Query: 166 IGYDCVADMWSL 177
                  D+W+L
Sbjct: 228 FPIGEKQDIWAL 239

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 1   MAEGKPPYGDIHPMR---AIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 57
           +   + P+ D   +R     + IP                F   +   L  NPEER + +
Sbjct: 246 LCFRQHPFEDGAKLRIVNGKYSIPPHDTQY--------TVFHSLIRAMLQVNPEERLSIA 297

Query: 58  EMLNHEFIQVSPGGNIPPGPP 78
           E+++    +++   N+ P  P
Sbjct: 298 EVVHQLQ-EIAAARNVNPKSP 317

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 121 NILL--NTEGHAKLADFGV-AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD-CVADMWS 176
           N LL  +     K+ DFG     +  +  K  + +GTP ++APEV+    YD  +AD+WS
Sbjct: 146 NTLLDGSPAPRLKICDFGYSKSSVLHSQPK--STVGTPAYIAPEVLLRQEYDGKIADVWS 203

Query: 177 L 177
            
Sbjct: 204 C 204

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 15/71 (21%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNT-----VIGTPFWMAPEVIQEIG------- 167
           +N+  +  G   + DFG+        A R         G    +APE+I+++        
Sbjct: 159 KNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDK 217

Query: 168 --YDCVADMWS 176
             +   +D+++
Sbjct: 218 LPFSKHSDVFA 228

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD-CVADMWSL 177
           N+LL+ + + K+ADFG + + T    K +   G P + APE+ Q   YD    D+WSL
Sbjct: 144 NLLLDADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 200

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 11/94 (11%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFC 87
           +R P   + +  + + R LV NP +R T  +++   +I    G       P         
Sbjct: 231 YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA--GHEEDELKPFVEPELDIS 288

Query: 88  DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRN 121
           D + +           M  +    E   E L + 
Sbjct: 289 DQKRIDI---------MVGMGYSQEEIQESLSKM 313

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 49.9 bits (120), Expect = 6e-08
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD-CVADMWSL 177
           N+LL+   +AK+ADFG++  ++D      T  G+P + APEVI    Y     D+WS 
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSC 197

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 50.0 bits (120), Expect = 6e-08
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD-CVADMWSL 177
           N+LL+   + K+ADFG++  +TD      T  G+P + APEVI    Y     D+WS 
Sbjct: 138 NLLLDDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSC 194

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 41.1 bits (97), Expect = 7e-05
 Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 11/94 (11%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFC 87
           +  PD  +P     + R +V +P +R T  E+    +  V+    + P            
Sbjct: 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEE--------- 275

Query: 88  DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRN 121
                 +     +      +    +  +E LR +
Sbjct: 276 --VQGSYADSRIVSKLGEAMGFSEDYIVEALRSD 307

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 50.1 bits (120), Expect = 6e-08
 Identities = 26/109 (23%), Positives = 32/109 (29%), Gaps = 13/109 (11%)

Query: 4   GKPPYGDIHPM---RAIFMIPTKPPPSFRE---PDVWTPEFIDFVSRCLVKNPEERATAS 57
           G P    I  M      F  P      + +   P    PE I   SR L   P  R T  
Sbjct: 274 GTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYTPTARLTPL 332

Query: 58  EMLNHEFIQV--SPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRM 104
           E   H F      P   +P G         F +F   +  S   L   +
Sbjct: 333 EACAHSFFDELRDPNVKLPNGRDTPAL---F-NFTTQELSSNPPLATIL 377

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 49.9 bits (120), Expect = 7e-08
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWS 176
           RN+L+ T  H K+ DFG+A  L     + +   G  P  WMA E I    Y   +D+WS
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 204

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 49.5 bits (119), Expect = 9e-08
 Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTD-TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL+++    K+ DFG+A  L++ ++ + N V+GT  + +PE  +    D   D++S+
Sbjct: 141 NILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSI 198

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWS 176
           RN+L+ T  H K+ DFG+A  L     + +   G  P  WMA E I    Y   +D+WS
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWS 204

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 19/114 (16%), Positives = 31/114 (27%), Gaps = 18/114 (15%)

Query: 4   GKPPYGDIHPM---RAIFMIPTKPPPSFRE--PDVWT---PEFIDFVSRCLVKNPEERAT 55
           G P    +  +        +       +     D       E  D +S  L   PEER  
Sbjct: 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMK 308

Query: 56  ASEMLNHEFIQV--SPGGNIPPGPPGAPSGGGFCDFEFLKF---LSYDDLQHRM 104
             E L H +      P   +P              F FL     +  +  + ++
Sbjct: 309 PYEALCHPYFDELHDPATKLPNNKDLPED-----LFRFLPNEIEVMSEAQKAKL 357

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYD-CVADMWSL 177
           N+LL+   +AK+ADFG++  ++D      T  G+P + APEVI    Y     D+WS 
Sbjct: 146 NVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSS 202

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 10/94 (10%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFC 87
           F  P    P  I  +   L  +P +RAT  ++  HE+ +      + P  P   S     
Sbjct: 233 FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSS----- 287

Query: 88  DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRN 121
                  +  + L+      +C  E  +  L   
Sbjct: 288 -----TMIDDEALKEVCEKFECSEEEVLSCLYNR 316

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 36  PEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
             F DF+   L  +P  R + +E+L H+F++
Sbjct: 330 ELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 131 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           KL DFG A   +D      ++I T  + APEVI  +G+D  +DMWS 
Sbjct: 202 KLIDFGCATFKSDYH---GSIINTRQYRAPEVILNLGWDVSSDMWSF 245

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 4   GKPPYGDIHPMRA-----IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATA 56
                 D   + +     I    T+P     +  P + + E +DF+ + L  +P +R TA
Sbjct: 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGI-SREAVDFLEQILTFSPMDRLTA 300

Query: 57  SEMLNHEFIQ 66
            E L+H ++ 
Sbjct: 301 EEALSHPYMS 310

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 1/81 (1%)

Query: 3   EGKPPYGDIHPMRAIFMIPTKPPPS-FREPDVWTPEFIDFVSRCLVKNPEERATASEMLN 61
           +G   + +            KP  S   +  +   +  D + R L  +P +R T +E L 
Sbjct: 274 KGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333

Query: 62  HEFIQVSPGGNIPPGPPGAPS 82
           H F                PS
Sbjct: 334 HPFFAGLTPEERSFHTSRNPS 354

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)

Query: 131 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           ++ADFG A    +      T++ T  +  PEVI E+G+    D+WS+
Sbjct: 182 RVADFGSATFDHEHH---TTIVATRHYRPPEVILELGWAQPCDVWSI 225

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RNIL+N+    K++DFG++  L D      T  G      W APE I    +   +D+WS
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 235

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 5/66 (7%)

Query: 4   GKPPYGDIH---PMRAIFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASE 58
           G P    +    P       PT     +R+  P+      ID + + L   P+ R    E
Sbjct: 259 GTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318

Query: 59  MLNHEF 64
            + H F
Sbjct: 319 AMAHPF 324

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 47.6 bits (114), Expect = 4e-07
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIQEI-GYD-CVADMWS 176
           N+LL T G  K++  GVA  L    A     T  G+P +  PE+   +  +     D+WS
Sbjct: 139 NLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWS 198

Query: 177 L 177
            
Sbjct: 199 A 199

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 9/51 (17%), Positives = 17/51 (33%)

Query: 28  FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPP 78
           +  P    P   D +   L   P +R +  ++  H + +        P P 
Sbjct: 230 YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPI 280

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 47.8 bits (114), Expect = 4e-07
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
            NIL+      K+ADFG+A  + D           P  W APE      +   +D+WS
Sbjct: 309 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+L TE   KL D G   ++         + GTP + APE+++  G     D++++
Sbjct: 212 NIML-TEEQLKLIDLGAVSRINSF----GYLYGTPGFQAPEIVRT-GPTVATDIYTV 262

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 9/61 (14%), Positives = 18/61 (29%), Gaps = 10/61 (16%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-ATASEM 59
           +    P     +          +  P  +        +   + R +  +P +R  TA EM
Sbjct: 269 LTLDLPTRNGRYVDG-----LPEDDPVLKTY----DSYGRLLRRAIDPDPRQRFTTAEEM 319

Query: 60  L 60
            
Sbjct: 320 S 320

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 47.8 bits (114), Expect = 4e-07
 Identities = 15/71 (21%), Positives = 33/71 (46%), Gaps = 9/71 (12%)

Query: 4   GKPPYGDIHPMRA------IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERAT 55
           G P   D+  +        I + P + P + ++  P + + + I+ +   L  NP +R T
Sbjct: 297 GTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSI-SDDGINLLESMLKFNPNKRIT 355

Query: 56  ASEMLNHEFIQ 66
             + L+H +++
Sbjct: 356 IDQALDHPYLK 366

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 47.7 bits (114), Expect = 4e-07
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 7/62 (11%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT----MAKRNTVIGTP-FWMAPEVIQEIGYDCVADM 174
           RNIL+  E   K+ DFG+   L         K       P FW APE + E  +   +D+
Sbjct: 143 RNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES--PIFWYAPESLTESKFSVASDV 200

Query: 175 WS 176
           WS
Sbjct: 201 WS 202

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 47.9 bits (114), Expect = 5e-07
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
           RN+L+++    KL DFG++  + D+   + +    P  WMAPE I    +   +D+W 
Sbjct: 520 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 577

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 47.6 bits (113), Expect = 6e-07
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
            NIL+      K+ADFG+A  + D           P  W APE      +   +D+WS
Sbjct: 392 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 47.3 bits (113), Expect = 6e-07
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG-TPF-WMAPEVIQEIGYDCVADMWS 176
           RN+LL +    ++ADFGVA  L     +       TP  WMA E I    Y   +D+WS
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWS 202

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 47.2 bits (113), Expect = 6e-07
 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 121 NILLNTEGHAKLADFGVA---GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI+++     K+ DFG+A       +++ +   VIGT  +++PE  +    D  +D++SL
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 24  PPPSFREPDVWTPEFIDFVSRCLVKNPEER-ATASEMLN 61
            PPS R   + + +    V + L KNPE R  TA+EM  
Sbjct: 237 IPPSARHEGL-SADLDAVVLKALAKNPENRYQTAAEMRA 274

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 47.0 bits (112), Expect = 6e-07
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 7/62 (11%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT----MAKRNTVIGTP-FWMAPEVIQEIGYDCVADM 174
           RNIL+  E   K+ DFG+   L         K       P FW APE + E  +   +D+
Sbjct: 174 RNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES--PIFWYAPESLTESKFSVASDV 231

Query: 175 WS 176
           WS
Sbjct: 232 WS 233

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.1 bits (112), Expect = 8e-07
 Identities = 25/127 (19%), Positives = 41/127 (32%), Gaps = 20/127 (15%)

Query: 4   GKPPYGDIHPMRA------IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERAT 55
           G P   DI  +        I + P +      E  P   + + I  + R LV NP +R T
Sbjct: 332 GTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPAS-SADAIHLLKRMLVFNPNKRIT 390

Query: 56  ASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREI 115
            +E L H F +      +               F     +    L++          +EI
Sbjct: 391 INECLAHPFFKEVRIAEVETNATEKVR----LPFNDWMNMDEPQLRYA-------FVKEI 439

Query: 116 EQLRRNI 122
           ++    I
Sbjct: 440 QRYHPEI 446

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 9/71 (12%)

Query: 4   GKPPYGDIHPMRA------IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERAT 55
           G P    +  +        I  +P  P   F +  P   +P+  D + + L  + ++R T
Sbjct: 241 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRA-SPQAADLLEKMLELDVDKRLT 299

Query: 56  ASEMLNHEFIQ 66
           A++ L H F +
Sbjct: 300 AAQALTHPFFE 310

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWSL 177
           N+ +N +   K+ DFG+A      M      + T ++ APEVI   + Y+   D+WS+
Sbjct: 156 NLAVNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSV 210

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN+L+++    K++DFG++  L D      T  G      W APE I    +   +D+WS
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWS 239

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT----MAKRNTVIGTP-FWMAPEVIQEIGYDCVADM 174
           RN+LL+ +   K+ DFG+A  + +       + +     P FW APE ++E  +   +D+
Sbjct: 163 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS--PVFWYAPECLKEYKFYYASDV 220

Query: 175 WS 176
           WS
Sbjct: 221 WS 222

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 7/62 (11%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT----MAKRNTVIGTP-FWMAPEVIQEIGYDCVADM 174
           RN+L+ +E   K+ DFG+   +         K +     P FW APE + +  +   +D+
Sbjct: 155 RNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDS--PVFWYAPECLMQSKFYIASDV 212

Query: 175 WS 176
           WS
Sbjct: 213 WS 214

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 22/76 (28%)

Query: 121 NILLNTEGHA-------------------KLADFGVAGQLTDTMAKRNTVIGTPFWMAPE 161
           NIL     +                    K+ DFG A    +     +T++ T  + APE
Sbjct: 148 NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH---STLVSTRHYRAPE 204

Query: 162 VIQEIGYDCVADMWSL 177
           VI  +G+    D+WS+
Sbjct: 205 VILALGWSQPCDVWSI 220

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 43.8 bits (104), Expect = 9e-06
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 36  PEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP 69
               D + + L  +P +R T  E L H F  +  
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
           RN L+      K+ADFG++  +T      +     P  W APE +    +   +D+W+
Sbjct: 347 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 404

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 9/71 (12%)

Query: 4   GKPPYGDIHPMRA------IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERAT 55
           G P    +  + +      I  +   P  +F         P  +D + + LV + ++R T
Sbjct: 247 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA-NPLAVDLLEKMLVLDSDKRIT 305

Query: 56  ASEMLNHEFIQ 66
           A++ L H +  
Sbjct: 306 AAQALAHAYFA 316

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWSL 177
           N+ +N +   K+ DFG+A    D M      + T ++ APE++   + Y+   D+WS+
Sbjct: 162 NLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSV 216

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 4   GKPPYGDIHPMRA------IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERAT 55
           G PP   +  +++      +  +P      F     +  +P  ++ + + LV + E+R T
Sbjct: 243 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNA-SPLAVNLLEKMLVLDAEQRVT 301

Query: 56  ASEMLNHEFIQ 66
           A E L H + +
Sbjct: 302 AGEALAHPYFE 312

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 14/63 (22%)

Query: 121 NILLNTEGHAKLADFGVA----GQLTDTMAKRNTVIGTPFWM-APEVI-QEIGYDCVADM 174
           N+ +N +   K+ DFG+A     ++T  +  R        W  APEVI   + Y    D+
Sbjct: 158 NLAVNEDCELKILDFGLARQADSEMTGYVVTR--------WYRAPEVILNWMRYTQTVDI 209

Query: 175 WSL 177
           WS+
Sbjct: 210 WSV 212

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RNIL+N+    K++DFG+   L D      T  G      W +PE I    +   +D+WS
Sbjct: 176 RNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWS 235

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 28/109 (25%), Positives = 37/109 (33%), Gaps = 13/109 (11%)

Query: 4   GKPPYGDIH---PMRAIFMIPTKPPPSFRE---PDVWTPEFIDFVSRCLVKNPEERATAS 57
           G P    I    P       P   P  F +   P    P+ ID +SR L   P  R TA 
Sbjct: 259 GTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRT-PPDAIDLISRLLEYTPSARLTAI 317

Query: 58  EMLNHEFIQ--VSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRM 104
           E L H F     +    +P G    P      ++   +     DL  R+
Sbjct: 318 EALCHPFFDELRTGEARMPNGRELPP----LFNWTKEELSVRPDLISRL 362

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN+LL    +AK++DFG++  L    +         +   W APE I    +   +D+WS
Sbjct: 465 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 524

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 9/71 (12%)

Query: 4   GKPPYGDIHPMRA------IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERAT 55
           G P   D++ +        +  +P K    +    P+    + +D + + L  NP +R  
Sbjct: 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDKMLTFNPHKRIE 307

Query: 56  ASEMLNHEFIQ 66
             + L H +++
Sbjct: 308 VEQALAHPYLE 318

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT----MAKRNTVIGTP-FWMAPEVIQEIGYDCVADM 174
           RNIL+ +E H K+ADFG+A  L       + +       P FW APE + +  +   +D+
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS--PIFWYAPESLSDNIFSRQSDV 213

Query: 175 WS 176
           WS
Sbjct: 214 WS 215

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 10/93 (10%)

Query: 17  IFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV--SPGGN 72
           I  +P  P     +  P V  P+ ID + R LV +P +R TA E L H ++Q    P  +
Sbjct: 260 IKSLPMYPAAPLEKMFPRV-NPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP-ND 317

Query: 73  IPPGPPGAPSGGGFCDFEF-LKFLSYDDLQHRM 104
            P G P  PS   F +F+   + L+  DL+  +
Sbjct: 318 EPEGEPIPPS---FFEFDHYKEALTTKDLKKLI 347

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 11/68 (16%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWM----------APEVI-QEIGYD 169
           N+L+N+    K+ DFG+A  + ++ A  +   G    M          APEV+     Y 
Sbjct: 142 NLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYS 201

Query: 170 CVADMWSL 177
              D+WS 
Sbjct: 202 RAMDVWSC 209

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN L++ +   K++DFG+   + D     +   GT F   W APEV     Y   +D+W+
Sbjct: 133 RNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV--GTKFPVKWSAPEVFHYFKYSSKSDVWA 190

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 44.1 bits (105), Expect = 6e-06
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN L+      K++DFG+   + D     +T  GT F   W +PEV     Y   +D+WS
Sbjct: 133 RNCLVGENQVIKVSDFGMTRFVLDDQYTSST--GTKFPVKWASPEVFSFSRYSSKSDVWS 190

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 43.9 bits (104), Expect = 7e-06
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
            NIL++     K+ADFG+A  + D           P  W APE I    +   +D+WS
Sbjct: 313 ANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 43.8 bits (104), Expect = 8e-06
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWS 176
           RN L+  +   K++DFG++ +  D +   +  +   P  W APE +    Y   +D+WS
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 43.8 bits (104), Expect = 9e-06
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN+LL    +AK++DFG++  L    +         +   W APE I    +   +D+WS
Sbjct: 139 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 198

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 43.8 bits (104), Expect = 9e-06
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 10/72 (13%)

Query: 4   GKPPYGDIHPM---RAIFMI----PTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERA 54
           G P   D+       A   +       P  ++    P    P  +D +++ L  NP+ R 
Sbjct: 251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA-DPVALDLIAKMLEFNPQRRI 309

Query: 55  TASEMLNHEFIQ 66
           +  + L H + +
Sbjct: 310 STEQALRHPYFE 321

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 16/65 (24%)

Query: 121 NILLNTEGHAKLADFGVA------GQLTDTMAKRNTVIGTPFWM-APEVI-QEIGYDCVA 172
           NILL       + DF +A         T  +  R        W  APE++ Q  G+  + 
Sbjct: 164 NILLADNNDITICDFNLAREDTADANKTHYVTHR--------WYRAPELVMQFKGFTKLV 215

Query: 173 DMWSL 177
           DMWS 
Sbjct: 216 DMWSA 220

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
            NIL++     K+ADFG+A  + D           P  W APE I    +   +D+WS
Sbjct: 138 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN+LL T    K+ DFG+   L                  W APE ++   +   +D W 
Sbjct: 150 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 209

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN L+N +G  K++DFG++  + D     +   G+ F   W  PEV+    +   +D+W+
Sbjct: 149 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV--GSKFPVRWSPPEVLMYSKFSSKSDIWA 206

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 37  EFIDFVSRCLVKNPEERATASEMLNHEFI 65
            F DF+   L   PE+RATA+E L H ++
Sbjct: 367 GFTDFLLPMLELIPEKRATAAECLRHPWL 395

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 39.9 bits (93), Expect = 2e-04
 Identities = 17/107 (15%), Positives = 28/107 (26%), Gaps = 3/107 (2%)

Query: 71  GNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHA 130
            NI              +    +            +                    +   
Sbjct: 176 ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV 235

Query: 131 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           K+AD G A  +          I T  + + EV+   GY+  AD+WS 
Sbjct: 236 KIADLGNACWVHK---HFTEDIQTRQYRSLEVLIGSGYNTPADIWST 279

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN+LL T+ +AK++DFG++  L              +   W APE I    +   +D+WS
Sbjct: 146 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 205

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 4   GKPPYGDIHPMR---AIFMIPTKPPPSFREPDVW---TPEFIDFVSRCLVKNPEERATAS 57
           G PP+   H +     +          F  P+ W   + E    +   L   P +R T +
Sbjct: 194 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE-WSEVSEEVKMLIRNLLKTEPTQRMTIT 252

Query: 58  EMLNHEFIQ 66
           E +NH +I 
Sbjct: 253 EFMNHPWIM 261

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL+ + G  KLADFG+A   +  MA    V+ T ++ APEV+ +  Y    DMWS+
Sbjct: 150 NILVTSGGTVKLADFGLARIYSYQMALTPVVV-TLWYRAPEVLLQSTYATPVDMWSV 205

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 5/60 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RNIL+ +    KL DFG++  + D    + +   T     WM+PE I    +   +D+W 
Sbjct: 142 RNILVASPECVKLGDFGLSRYIEDEDYYKAS--VTRLPIKWMSPESINFRRFTTASDVWM 199

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN+L++ +  AK++DFG+  + + T               W APE ++E  +   +D+WS
Sbjct: 318 RNVLVSEDNVAKVSDFGLTKEASSTQD------TGKLPVKWTAPEALREKKFSTKSDVWS 371

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL+ + G  KLADFG+A   +  MA  + V+ T ++ APEV+ +  Y    D+WS+
Sbjct: 150 NILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAPEVLLQSSYATPVDLWSV 205

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 21  PTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPP 78
             +         P++ +   +  +  CL  +P ER T  ++L+H + +            
Sbjct: 243 DPEDMEPLELKFPNI-SYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLAKEH 301

Query: 79  GAPS 82
             P+
Sbjct: 302 DKPA 305

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
           RN+L+++    KL DFG++  + D+   + +    P  WMAPE I    +   +D+W 
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 202

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN+L++ +  AK++DFG+  + + T               W APE ++E  +   +D+WS
Sbjct: 146 RNVLVSEDNVAKVSDFGLTKEASSTQD------TGKLPVKWTAPEALREKKFSTKSDVWS 199

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 18/82 (21%)

Query: 4   GKPPYGDIHPM-----RAIFMIPTKPPPSFRE-------------PDVWTPEFIDFVSRC 45
           G P    +  +       +   P     SF +               +   +  D +S+ 
Sbjct: 243 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 302

Query: 46  LVKNPEERATASEMLNHEFIQV 67
           LV +  +R +  E L H +I V
Sbjct: 303 LVIDASKRISVDEALQHPYINV 324

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NI++ ++   K+ DFG+A     +      V+ T ++ APEVI  +GY    D+WS+
Sbjct: 157 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVV-TRYYRAPEVILGMGYKENVDIWSV 212

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 18/82 (21%)

Query: 4   GKPPYGDIHPM-----RAIFMIPTKPPPSFRE--PDVW-----------TPEFIDFVSRC 45
           G P    +  +       +   P     +F +  PD               +  D +S+ 
Sbjct: 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 339

Query: 46  LVKNPEERATASEMLNHEFIQV 67
           LV +P +R +  + L H +I V
Sbjct: 340 LVIDPAKRISVDDALQHPYINV 361

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.8 bits (98), Expect = 5e-05
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 13/63 (20%)

Query: 121 NILLNTEGHAKLADFGVA------GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADM 174
           NI++ ++   K+ DFG+A        +T  +  R       ++ APEVI  +GY    D+
Sbjct: 194 NIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR-------YYRAPEVILGMGYKENVDI 246

Query: 175 WSL 177
           WS+
Sbjct: 247 WSV 249

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF---WMAPEVIQEIGYDCVADMWS 176
           RN L+      K+ADFG++  +T      +   G  F   W APE +    +   +D+W+
Sbjct: 140 RNCLVGENHLVKVADFGLSRLMTGDTYTAHA--GAKFPIKWTAPESLAYNKFSIKSDVWA 197

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWS 176
           RNILL+ +   K+ DFG+A  +              P  WMAPE I +  Y   +D+WS
Sbjct: 222 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 280

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 12/125 (9%)

Query: 5   KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF 64
           K      +                 + D    E +D + + L  NP +R +A++ L H F
Sbjct: 273 KVEIRQSNKRDIFTKWKNLLLKINPKADC-NEEALDLLDKLLQFNPNKRISANDALKHPF 331

Query: 65  IQV--SPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNI 122
           + +  +P                          S DD ++ + +   E+ R   +L  N 
Sbjct: 332 VSIFHNPNEEPNCDHIITI------PINDNVKHSIDDYRNLVYS---EISRRKRELISNK 382

Query: 123 LLNTE 127
             N +
Sbjct: 383 HQNVQ 387

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 23  KPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP 69
           K         P   +   ID   +CL  +P++R   +E+L+H+F Q+  
Sbjct: 267 KEREPLERRYPK-LSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG 314

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 120 RNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMW 175
           RN +L+ +   K+ADFG+A  +   +  +  N      P  WMA E +Q   +   +D+W
Sbjct: 157 RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 216

Query: 176 S 176
           S
Sbjct: 217 S 217

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 121 NILLNTEGHAKLADFGVA--GQLTDTMAKRNTVIGTPFWMAPE 161
           NILL+    AK++DFG+A   +        + ++GT  +MAPE
Sbjct: 163 NILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE 205

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 120 RNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMW 175
           RN +L+ +   K+ADFG+A  +   +  +  N      P  WMA E +Q   +   +D+W
Sbjct: 221 RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 280

Query: 176 S 176
           S
Sbjct: 281 S 281

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 21  PTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPP 75
           P     + +     +   E +D ++  L  +P +R +A   L H +   +      P
Sbjct: 276 PKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND---FDP 329

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 6/68 (8%)

Query: 21  PTKPPPSFRE------PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIP 74
             +PP   R+       +      +DF+   L  NP+ R +A + L+H +          
Sbjct: 247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHASM 306

Query: 75  PGPPGAPS 82
            G      
Sbjct: 307 GGSRSHHH 314

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNT--VIGTPFWMAPEVI-QEIGYDCVADMWS 176
           N+L+N  G  KL DFG+A      +    +  V+ T ++ AP+V+     Y    D+WS
Sbjct: 138 NLLINKRGQLKLGDFGLARAFGIPV-NTFSSEVV-TLWYRAPDVLMGSRTYSTSIDIWS 194

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 8/89 (8%), Positives = 23/89 (25%), Gaps = 8/89 (8%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK-----PPPSFREPDVWTPEFIDFVSRCLVKNPEER-- 53
           +   + P  +      +             P+  + D+   +     +R +  +   R  
Sbjct: 195 LLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDI-PFQISAVAARSVQGDGGIRSA 253

Query: 54  ATASEMLNHEFIQVSPGGNIPPGPPGAPS 82
           +T   ++            + P      S
Sbjct: 254 STLLNLMQQATAVADRTEVLGPIDEAPVS 282

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWS 176
           N+L+N EG  K+ADFG+A      + K    I T ++ AP+V+     Y    D+WS
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWS 186

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 6/68 (8%)

Query: 18  FMIPTKPPPSFRE--PDVWTPEF-IDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIP 74
             +        ++         + +D + + LV +P +R  + + LNH+F    P   +P
Sbjct: 265 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP---MP 321

Query: 75  PGPPGAPS 82
               G  S
Sbjct: 322 SDLKGMLS 329

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 7/62 (11%)

Query: 121 NILLNTEGHAKLADFGVA---GQLTDTMAKR--NTVIGTPFWMAPEVI-QEIGYDCVADM 174
           N+L+  +G  KLADFG+A       ++   R  N V+ T ++  PE++  E  Y    D+
Sbjct: 154 NVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV-TLWYRPPELLLGERDYGPPIDL 212

Query: 175 WS 176
           W 
Sbjct: 213 WG 214

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWSL 177
           N+L+N  G  KLA+FG+A      +   +  + T ++  P+V+     Y    DMWS 
Sbjct: 131 NLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPF-WMAPEVIQEIGYDCVADMW 175
           RNILL      K+ DFG+A  + +      K N  +  P  WMAPE I    Y   +D+W
Sbjct: 174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL--PVKWMAPESIFNCVYTFESDVW 231

Query: 176 S 176
           S
Sbjct: 232 S 232

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 7/60 (11%)

Query: 21  PTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPP 78
           P      F +  P +   +    +S+ L  +P +R +A   L H F Q        P P 
Sbjct: 242 PKWARQDFSKVVPPL-DEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT----KPVPH 296

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMWS 176
           N+L+N++G  KLADFG+A      +      + T ++ AP+V+     Y    D+WS
Sbjct: 149 NLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWS 205

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPF-WMAPEVIQEIGYDCVADMWS 176
           RNIL+     AK+ADFG++      + K    +  P  WMA E +    Y   +D+WS
Sbjct: 171 RNILVGENYVAKIADFGLSRGQEVYVKKTMGRL--PVRWMAIESLNYSVYTTNSDVWS 226

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 120 RNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMW 175
           RN +L+     K+ADFG+A  +   +  + +       P  W A E +Q   +   +D+W
Sbjct: 153 RNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVW 212

Query: 176 S 176
           S
Sbjct: 213 S 213

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGT-PF-WMAPEVIQEIGYDCVADMWS 176
           RN+L+      K+ DFG+A  +              P  WMAPE + E  Y   +D+WS
Sbjct: 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWS 259

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 8   YGDIHPMRAIFMIPTKPPPSFRE------PDVWTPEFIDFVSRCLVKNPEERATASEMLN 61
           Y      R   ++       +          + +PE +DF+ + L  + + R TA E + 
Sbjct: 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319

Query: 62  HEF 64
           H +
Sbjct: 320 HPY 322

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 38.4 bits (90), Expect = 6e-04
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 6/61 (9%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT---MAKRNTVIGTPF-WMAPEVIQEIGYDCVADMW 175
           RN+LL     AK+ DFG+A  + +    + K N  +  P  WMAPE I +  Y   +D+W
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVW 250

Query: 176 S 176
           S
Sbjct: 251 S 251

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 8/46 (17%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNT-----VIGTPFWMAPE 161
           NILL+     K+ DFG++ + T+      T     V GT  ++ PE
Sbjct: 169 NILLDENFVPKITDFGISKKGTEL---DQTHLSTVVKGTLGYIDPE 211

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAK-RNTVIGTPFWMAPEVI-QEIGYDCVADMWS 176
           N+L+N  G  KLADFG+A   +       N V+ T ++  P+++     Y    DMW 
Sbjct: 130 NLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWG 186

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	177
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.83
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.82
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.81
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.81
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.8
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.79
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.78
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.77
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.77
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.76
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.76
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.76
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.74
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.74
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.72
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.71
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.7
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.7
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.64
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.62
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.61
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.6
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.6
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.6
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.6
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.59
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.58
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.57
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.57
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.56
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.56
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.56
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.56
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.55
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.55
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.54
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.54
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.54
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.53
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.53
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.53
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.53
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.52
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.52
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.52
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.52
3niz_A	311	Rhodanese family protein; structural genomics, str	99.52
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.52
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.51
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.51
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.51
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.51
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.51
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.51
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.5
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.5
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.5
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.5
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.5
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.5
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.5
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.5
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.49
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.49
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.49
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.48
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.48
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.48
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.48
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.48
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.47
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.47
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.47
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.47
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.47
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.47
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.47
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.46
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.46
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.46
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.46
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.45
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.45
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.45
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.45
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.45
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.45
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.44
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.44
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.44
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.44
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.44
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.44
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.44
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.44
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.43
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.43
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.43
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.43
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.43
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.43
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.43
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.43
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.42
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.42
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.42
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.42
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.42
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.42
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.42
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.42
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.42
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.41
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.41
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.41
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.41
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.41
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.41
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.41
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.41
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.41
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.41
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.41
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.41
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.4
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.4
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.4
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.4
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.4
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.4
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.4
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.4
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.4
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.4
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.4
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.4
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.4
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.4
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.39
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.39
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.39
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.39
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.39
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.39
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.39
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.39
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.38
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.38
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.38
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.38
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.38
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.38
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.38
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.38
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.38
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.38
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.38
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.38
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.38
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.38
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.38
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.37
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.37
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.37
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.37
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.37
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.37
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.37
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.37
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.37
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.37
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.36
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.36
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.36
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.36
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.36
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.35
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.35
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.35
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.35
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.35
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.35
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.35
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.35
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.35
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.35
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.35
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.35
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.35
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.35
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.35
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.34
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.34
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.34
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.34
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.34
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.34
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.34
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.34
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.33
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.33
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.33
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.33
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.33
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.32
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.32
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.32
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.32
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.32
3bhy_A	283	Death-associated protein kinase 3; death associate	99.32
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.32
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.32
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.32
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.32
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.31
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.31
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.31
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.31
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.31
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.31
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.3
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.3
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.3
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.3
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.3
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.3
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.3
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.3
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.29
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.29
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.29
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.29
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.28
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.28
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.28
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.28
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.28
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.27
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.27
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.27
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.27
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.27
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.26
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.26
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.26
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.26
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.25
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.25
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.25
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.25
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.24
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.23
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.22
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.2
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.17
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.16
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.12
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.12
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.1
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.09
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.07
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.02
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.01
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	98.98
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	98.95
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	98.94
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	98.94
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	98.94
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	98.93
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	98.92
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.92
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.9
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.89
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.89
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.88
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	98.88
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.87
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	98.87
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.87
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	98.86
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.86
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.86
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	98.86
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.85
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.85
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.84
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	98.83
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.83
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.83
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.83
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.83
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	98.83
3niz_A	311	Rhodanese family protein; structural genomics, str	98.83
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	98.82
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.82
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.82
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.82
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	98.81
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	98.81
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.81
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	98.8
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.78
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	98.78
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.78
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.77
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	98.77
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	98.77
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.76
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.76
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.76
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	98.76
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.76
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	98.75
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	98.75
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	98.74
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.74
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	98.74
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.74
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.74
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.74
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.73
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.73
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.73
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.72
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.72
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.72
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.72
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	98.71
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.71
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	98.71
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.71
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	98.7
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	98.7
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	98.69
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	98.69
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.69
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.69
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.68
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	98.68
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	98.68
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.68
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	98.67
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.67
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.67
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.67
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.67
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.67
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.67
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.66
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.66
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	98.66
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	98.66
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.65
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.65
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.65
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.64
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.64
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.64
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.64
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.63
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.63
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	98.63
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.63
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.62
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.62
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.62
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	98.61
3o0g_A	292	Cell division protein kinase 5; kinase activator c	98.61
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	98.6
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	98.6
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.6
3bhy_A	283	Death-associated protein kinase 3; death associate	98.59
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.57
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.55
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.55
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.54
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.53
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.52
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.51
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.51
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.51
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.5
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.5
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	98.49
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.49
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	98.48
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.48
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.48
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.48
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.47
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.47
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.47
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	98.46
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.45
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.45
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.42
3rp9_A	458	Mitogen-activated protein kinase; structural genom	98.41
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.4
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.39
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	98.39
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.38
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.38
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.36
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.35
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.34
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	98.33
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.32
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.31
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.3
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.3
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.28
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	98.27
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.27
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.27
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.26
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.26
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.25
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.23
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.23
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	98.21
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.19
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.19
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.18
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.17
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.17
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	98.17
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	98.16
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	98.16
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.16
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.14
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.13
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.13
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	98.12
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.1
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.1
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	98.09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	98.08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.08
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	98.07
3uqc_A	286	Probable conserved transmembrane protein; structur	98.06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	98.05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.05
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.02
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.01
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.01
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	97.99
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	97.99
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	97.99
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.97
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.95
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	97.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	97.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	97.94
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	97.93
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	97.92
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	97.92
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	97.92
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	97.9
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	97.88
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	97.86
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	97.85
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	97.82
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	97.82
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	97.77
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	97.72
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	97.72
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	97.7
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.64
3uqc_A	286	Probable conserved transmembrane protein; structur	97.63
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	97.63
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	97.62
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	97.6
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.57
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	97.57
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.57
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	97.46
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	97.43
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	97.43
3soc_A	322	Activin receptor type-2A; structural genomics cons	97.29
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.22
2a19_B	284	Interferon-induced, double-stranded RNA-activated	97.22
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	97.21
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.21
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	97.2
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	97.19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	97.13
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.11
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	97.05
3q4u_A	301	Activin receptor type-1; structural genomics conso	97.04
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	97.04
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.01
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	96.98
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	96.84
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	96.78

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.83  E-value=4e-22  Score=148.02  Aligned_cols=78  Identities=37%  Similarity=0.761  Sum_probs=70.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.|+|..+++|||+|            |+||+++.++.+||+|||+|+.+........+.+||+.|||||++.+..
T Consensus       179 i~~aL~ylH~~~IiHRDlK------------p~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~  246 (346)
T 4fih_A          179 VLQALSVLHAQGVIHRDIK------------SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP  246 (346)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCcccccCC------------HHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCC
Confidence            3678889999999999999            6699999999999999999998766555566789999999999999999


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++||||+
T Consensus       247 y~~~~DiWSl  256 (346)
T 4fih_A          247 YGPEVDIWSL  256 (346)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCcHHHHHHH
Confidence            9999999995

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.82  E-value=1.1e-21  Score=143.56  Aligned_cols=78  Identities=37%  Similarity=0.473  Sum_probs=66.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.|+|..+++|||+|            |+||+++.++.+|++|||+|+..........+.+||+.|||||++.+..
T Consensus       135 i~~aL~ylH~~~IiHRDlK------------p~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~  202 (304)
T 3ubd_A          135 LALALDHLHSLGIIYRDLK------------PENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG  202 (304)
T ss_dssp             HHHHHHHHHHTTCCCSSCC------------GGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSC
T ss_pred             HHHHHHHHHHCCCcCCCCC------------HHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCC
Confidence            4678889999999999999            6799999999999999999987655444556789999999999999999


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++||||+
T Consensus       203 y~~~~DiwSl  212 (304)
T 3ubd_A          203 HTQSADWWSF  212 (304)
T ss_dssp             CCTHHHHHHH
T ss_pred             CCCCCcccch
Confidence            9999999995

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.81  E-value=1.1e-21  Score=148.96  Aligned_cols=79  Identities=37%  Similarity=0.754  Sum_probs=70.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.|+|..+++|||+|            ++||+++.+|.+||+|||+|+.+........+.+||+.|||||++.+.
T Consensus       255 qil~aL~ylH~~~IiHRDiK------------p~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~  322 (423)
T 4fie_A          255 AVLQALSVLHAQGVIHRDIK------------SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL  322 (423)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------TTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCeecccCC------------HHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCC
Confidence            34678889999999999999            669999999999999999999876655556678999999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       323 ~y~~~~DiWSl  333 (423)
T 4fie_A          323 PYGPEVDIWSL  333 (423)
T ss_dssp             CBCTHHHHHHH
T ss_pred             CCCcHHHHHHH
Confidence            99999999995

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.81  E-value=5.2e-22  Score=147.63  Aligned_cols=79  Identities=32%  Similarity=0.601  Sum_probs=69.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.|+|..+++|||+|            |+||+++.++.+||+|||+|+.+........+.+||+.|||||++.+.
T Consensus       133 qi~~aL~ylH~~~IiHRDlK------------p~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~  200 (350)
T 4b9d_A          133 QICLALKHVHDRKILHRDIK------------SQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENK  200 (350)
T ss_dssp             HHHHHHHHHHHTTCEETTCC------------GGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCeeeccCC------------HHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCC
Confidence            44788899999999999999            679999999999999999998775543334567899999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       201 ~y~~~~DiwSl  211 (350)
T 4b9d_A          201 PYNNKSDIWAL  211 (350)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCcHHHHHHH
Confidence            99999999995

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.80  E-value=1.9e-21  Score=142.45  Aligned_cols=78  Identities=32%  Similarity=0.540  Sum_probs=68.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++|+|..+++|||+|            |+||+++.++.+||+|||+|+.+...  .....+.+||+.|||||++.+
T Consensus       141 i~~al~ylH~~~IiHRDlK------------PeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~  208 (311)
T 4aw0_A          141 IVSALEYLHGKGIIHRDLK------------PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE  208 (311)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHCCCccCCCC------------HHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcC
Confidence            4678889999999999999            67999999999999999999976533  223456799999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++||||+
T Consensus       209 ~~y~~~~DiWSl  220 (311)
T 4aw0_A          209 KSACKSSDLWAL  220 (311)
T ss_dssp             SCBCHHHHHHHH
T ss_pred             CCCCcHHHHHHH
Confidence            999999999995

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.79  E-value=4.5e-21  Score=140.32  Aligned_cols=79  Identities=28%  Similarity=0.472  Sum_probs=61.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC------------CCcccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA------------KRNTVIGT  154 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~g~  154 (177)
                      +..++++|+|..+++|||+|            |+||+++.++.+|++|||+|+.+.....            ..++.+||
T Consensus       126 qi~~al~ylH~~~IiHRDlK------------p~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT  193 (299)
T 4g31_A          126 QIAEAVEFLHSKGLMHRDLK------------PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT  193 (299)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTCCEEECCCCCC--------------------------CC
T ss_pred             HHHHHHHHHHHCcCccccCc------------HHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccC
Confidence            44688999999999999999            6799999999999999999987643211            12346899


Q ss_pred             ccccccccccCCCCCccceEecC
Q psy3254         155 PFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       155 ~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      +.|||||++.+..|+.++|||||
T Consensus       194 ~~YmAPE~~~~~~y~~~~DiwSl  216 (299)
T 4g31_A          194 KLYMSPEQIHGNSYSHKVDIFSL  216 (299)
T ss_dssp             CTTSCHHHHTTCCCCTHHHHHHH
T ss_pred             ccccCHHHHcCCCCCCHHHHHHH
Confidence            99999999999999999999995

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.78  E-value=1.5e-20  Score=139.18  Aligned_cols=79  Identities=33%  Similarity=0.447  Sum_probs=64.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccC-----CCcccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMA-----KRNTVIGTPFWMAP  160 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~-----~~~~~~g~~~y~aP  160 (177)
                      +...++.|+|..+++|||+|            |+||+++.++ .+||+|||+|+.+.....     .....+||+.||||
T Consensus       158 qi~~aL~ylH~~~IiHRDlK------------p~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAP  225 (336)
T 4g3f_A          158 QALEGLEYLHTRRILHGDVK------------ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP  225 (336)
T ss_dssp             HHHHHHHHHHTTTEECSCCC------------GGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCH
T ss_pred             HHHHHHHHHHHCCceecccC------------HHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCH
Confidence            34678889999999999999            6799999887 699999999987653211     12346899999999


Q ss_pred             ccccCCCCCccceEecC
Q psy3254         161 EVIQEIGYDCVADMWSL  177 (177)
Q Consensus       161 e~~~~~~~~~~~Diws~  177 (177)
                      |++.+..|+.++|||||
T Consensus       226 E~~~~~~y~~~~DiwSl  242 (336)
T 4g3f_A          226 EVVMGKPCDAKVDIWSS  242 (336)
T ss_dssp             HHHTTCCCCTHHHHHHH
T ss_pred             HHHCCCCCCcHHHHHHH
Confidence            99999999999999995

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.77  E-value=1.9e-20  Score=135.19  Aligned_cols=77  Identities=31%  Similarity=0.474  Sum_probs=57.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...+++|+|..+++|||+|            |+||+++.++.+|++|||+|+..... ....+.+||+.|||||++.+..
T Consensus       121 i~~al~ylH~~~IiHRDiK------------P~NILl~~~~~vkl~DFGla~~~~~~-~~~~~~~GT~~Y~APE~~~~~~  187 (275)
T 3hyh_A          121 IISAVEYCHRHKIVHRDLK------------PENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKL  187 (275)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------TTTEEECTTCCEEECCSSCC----------------CTTSCHHHHSSSS
T ss_pred             HHHHHHHHHHCCcccccCC------------hHHeEECCCCCEEEeecCCCeecCCC-CccCCeeECcccCChhhhcCCC
Confidence            4678889999999999999            67999999999999999999876543 2344678999999999999887


Q ss_pred             C-CccceEecC
Q psy3254         168 Y-DCVADMWSL  177 (177)
Q Consensus       168 ~-~~~~Diws~  177 (177)
                      | +.++||||+
T Consensus       188 y~~~~~DiwSl  198 (275)
T 3hyh_A          188 YAGPEVDVWSC  198 (275)
T ss_dssp             CCCTHHHHHHH
T ss_pred             CCCChhhhHHH
Confidence            6 579999995

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.77  E-value=4.8e-20  Score=134.11  Aligned_cols=76  Identities=33%  Similarity=0.510  Sum_probs=63.8

Q ss_pred             chHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.|+|..+  ++|||+|            |+||+++. ++.+||+|||+|+....  ....+.+||+.|||||++
T Consensus       137 qi~~aL~ylH~~~~~IiHRDlK------------p~NILl~~~~g~vKl~DFGla~~~~~--~~~~~~~GTp~YmAPE~~  202 (290)
T 3fpq_A          137 QILKGLQFLHTRTPPIIHRDLK------------CDNIFITGPTGSVKIGDLGLATLKRA--SFAKAVIGTPEFMAPEMY  202 (290)
T ss_dssp             HHHHHHHHHHTSSSCCCCCCCC------------GGGEEESSTTSCEEECCTTGGGGCCT--TSBEESCSSCCCCCGGGG
T ss_pred             HHHHHHHHHHHCCCCEEecccC------------hhheeEECCCCCEEEEeCcCCEeCCC--CccCCcccCccccCHHHc
Confidence            3467888999988  9999999            66999974 78999999999985433  234567899999999988


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+ .|+.++|||||
T Consensus       203 ~~-~y~~~~DiwSl  215 (290)
T 3fpq_A          203 EE-KYDESVDVYAF  215 (290)
T ss_dssp             GT-CCCTHHHHHHH
T ss_pred             CC-CCCcHHHHHHH
Confidence            65 69999999995

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.76  E-value=2.1e-20  Score=137.01  Aligned_cols=79  Identities=27%  Similarity=0.428  Sum_probs=62.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.|+|..+++|||+|            ++||+++.++.+||+|||+|+.....  .......+||+.|||||++.
T Consensus       140 qia~gL~yLH~~~IiHRDlK------------p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~  207 (307)
T 3omv_A          140 QTAQGMDYLHAKNIIHRDMK------------SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR  207 (307)
T ss_dssp             HHHHHHHHHHHTTCBCSCCC------------SSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHH
T ss_pred             HHHHHHHHHHHCCccCCccC------------HHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhh
Confidence            34688899999999999999            66999999999999999999875432  22334578999999999996


Q ss_pred             C---CCCCccceEecC
Q psy3254         165 E---IGYDCVADMWSL  177 (177)
Q Consensus       165 ~---~~~~~~~Diws~  177 (177)
                      +   +.|+.++|||||
T Consensus       208 ~~~~~~y~~ksDVwS~  223 (307)
T 3omv_A          208 MQDNNPFSFQSDVYSY  223 (307)
T ss_dssp             CCSSCCCCHHHHHHHH
T ss_pred             ccCCCCCCcHHHhHhH
Confidence            3   469999999996

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.76  E-value=2.1e-20  Score=139.49  Aligned_cols=79  Identities=30%  Similarity=0.460  Sum_probs=68.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      +...++.|+|..+++|||+|            ++||+++.++.+||+|||+|+.+.....  ..+..+||+.|||||++.
T Consensus       193 qia~gl~yLH~~~iiHRDLK------------~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  260 (353)
T 4ase_A          193 QVAKGMEFLASRKCIHRDLA------------ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  260 (353)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred             HHHHHHHhHhhCCeecCccC------------ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHh
Confidence            45788999999999999999            6799999999999999999987643322  234567999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       261 ~~~y~~ksDVwS~  273 (353)
T 4ase_A          261 DRVYTIQSDVWSF  273 (353)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCCCCcccEeeh
Confidence            9999999999996

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.76  E-value=3.6e-20  Score=135.97  Aligned_cols=79  Identities=23%  Similarity=0.341  Sum_probs=68.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.|+|..+++|||+|            ++||+++.++.+|++|||+++.+...  ....+..+||+.|||||++.
T Consensus       153 qia~gl~yLH~~~iiHRDLK------------~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  220 (308)
T 4gt4_A          153 QIAAGMEYLSSHHVVHKDLA------------TRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM  220 (308)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCcc------------ccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHh
Confidence            45788999999999999999            66999999999999999999876432  22344568999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ++.|+.++|||||
T Consensus       221 ~~~~s~ksDVwSf  233 (308)
T 4gt4_A          221 YGKFSIDSDIWSY  233 (308)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCCccchhhhH
Confidence            9999999999996

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.74  E-value=8.7e-20  Score=135.09  Aligned_cols=79  Identities=24%  Similarity=0.319  Sum_probs=60.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.|+|..+++|||+|            ++||+++.++.+||+|||+++.+....  ...+..+||+.|||||++.
T Consensus       166 qia~gl~yLH~~~iiHRDLK------------p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~  233 (329)
T 4aoj_A          166 QVAAGMVYLAGLHFVHRDLA------------TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL  233 (329)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHT
T ss_pred             HHHHHHHHHhcCCeeccccc------------HhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhc
Confidence            44688899999999999999            679999999999999999998764321  2234467999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       234 ~~~~~~~sDvwS~  246 (329)
T 4aoj_A          234 YRKFTTESDVWSF  246 (329)
T ss_dssp             TCCCCHHHHHHHH
T ss_pred             CCCCCccccccch
Confidence            9999999999996

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.74  E-value=5e-20  Score=134.68  Aligned_cols=79  Identities=25%  Similarity=0.351  Sum_probs=67.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.|+|..+++|||+|            ++||+++.++.+|++|||+|+.......  .....+||+.|||||++.
T Consensus       136 qia~gl~yLH~~~iiHRDlK------------p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~  203 (299)
T 4asz_A          136 QIAAGMVYLASQHFVHRDLA------------TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  203 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCcccCccC------------HhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHc
Confidence            45788899999999999999            6799999999999999999986543321  223457999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       204 ~~~~~~k~DVwS~  216 (299)
T 4asz_A          204 YRKFTTESDVWSL  216 (299)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCCchhhHHHH
Confidence            9999999999996

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.72  E-value=5.2e-19  Score=140.61  Aligned_cols=76  Identities=34%  Similarity=0.522  Sum_probs=66.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-C
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-I  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~  166 (177)
                      ...++.|+|..+++|||+|            |+||+++.+|.+||+|||+|+.+...  ...+.+||+.|||||++.. .
T Consensus       301 Il~aL~yLH~~gIiHRDLK------------PeNILld~~G~vKL~DFGlA~~~~~~--~~~t~~GTp~YmAPEvl~~~~  366 (689)
T 3v5w_A          301 IILGLEHMHNRFVVYRDLK------------PANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGV  366 (689)
T ss_dssp             HHHHHHHHHTTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECSSC--CCCSCCSCGGGCCHHHHSTTC
T ss_pred             HHHHHHHHHHCCccccCCc------------hHHeEEeCCCCEEecccceeeecCCC--CCCCccCCcCccCHHHHhCCC
Confidence            3678889999999999999            67999999999999999999876543  3446799999999999964 5


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++||||+
T Consensus       367 ~y~~~vDiWSL  377 (689)
T 3v5w_A          367 AYDSSADWFSL  377 (689)
T ss_dssp             CCCTHHHHHHH
T ss_pred             CCCcHHHHHHH
Confidence            79999999995

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.71  E-value=8.6e-19  Score=132.82  Aligned_cols=79  Identities=27%  Similarity=0.455  Sum_probs=65.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc----cCCCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT----MAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~g~~~y~aPe~  162 (177)
                      +...++.|+|..+++|||+|            |+||+++.++.+|++|||+|+.+...    .....+.+||+.|||||+
T Consensus       166 qil~al~ylH~~~iiHRDlK------------P~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv  233 (398)
T 4b99_A          166 QLLRGLKYMHSAQVIHRDLK------------PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL  233 (398)
T ss_dssp             HHHHHHHHHHHTTCBCCCCC------------GGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHH
T ss_pred             HHHHHHHHHHHCcCcCCCcC------------ccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHH
Confidence            34688889999999999999            67999999999999999999876432    223456799999999999


Q ss_pred             ccCC-CCCccceEecC
Q psy3254         163 IQEI-GYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~-~~~~~~Diws~  177 (177)
                      +.+. .|+.++||||+
T Consensus       234 ~~~~~~~~~~~DiWSl  249 (398)
T 4b99_A          234 MLSLHEYTQAIDLWSV  249 (398)
T ss_dssp             HTTCSCCCTHHHHHHH
T ss_pred             hcCCCCCCChhheehh
Confidence            8874 57899999995

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.70  E-value=2.2e-19  Score=131.70  Aligned_cols=79  Identities=28%  Similarity=0.413  Sum_probs=61.2

Q ss_pred             chHHHHhhhchh--------hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccc
Q psy3254          87 CDFEFLKFLSYD--------DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGT  154 (177)
Q Consensus        87 ~~~~~l~~l~~~--------~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~  154 (177)
                      ....++.|+|..        +++|||+|            ++||+++.++.+|++|||+++.......    .....+||
T Consensus       108 ~ia~gl~ylH~~~~~~~~~~~IiHRDlK------------p~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT  175 (303)
T 3hmm_A          108 STASGLAHLHMEIVGTQGKPAIAHRDLK------------SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT  175 (303)
T ss_dssp             HHHHHHHHHHCCBCSTTCBCCEECSCCC------------GGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CC
T ss_pred             HHHHHHHHHHHhhhhccCCCCEeeccCC------------cccEEECCCCCEEEEeCCCCccccCCCCceeeeccccccc
Confidence            346788899976        89999999            6799999999999999999987643221    22346899


Q ss_pred             ccccccccccCC------CCCccceEecC
Q psy3254         155 PFWMAPEVIQEI------GYDCVADMWSL  177 (177)
Q Consensus       155 ~~y~aPe~~~~~------~~~~~~Diws~  177 (177)
                      +.|||||++.+.      .|+.++|||||
T Consensus       176 ~~ymAPE~l~~~~~~~~~~~~~k~DVwS~  204 (303)
T 3hmm_A          176 KRYMAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             GGGCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             ccccCHHHhcccccccCCccChhHhhhhH
Confidence            999999999754      36779999996

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.70  E-value=8.5e-19  Score=131.37  Aligned_cols=79  Identities=33%  Similarity=0.420  Sum_probs=62.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-CCeEEeeeeccccccccc--------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-GHAKLADFGVAGQLTDTM--------------------  145 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-~~~~l~dfg~~~~~~~~~--------------------  145 (177)
                      +...+++|+|..+++|||+|            |+||+++.+ +.+|++|||+|+......                    
T Consensus       125 qll~al~ylH~~gIiHRDiK------------PeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (361)
T 4f9c_A          125 NLFKALKRIHQFGIVHRDVK------------PSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK  192 (361)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-------------
T ss_pred             HHHHHHHHHHHCCeEeCcCC------------HHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccc
Confidence            44788899999999999999            779999876 789999999997543211                    


Q ss_pred             --------CCCccccccccccccccccCC-CCCccceEecC
Q psy3254         146 --------AKRNTVIGTPFWMAPEVIQEI-GYDCVADMWSL  177 (177)
Q Consensus       146 --------~~~~~~~g~~~y~aPe~~~~~-~~~~~~Diws~  177 (177)
                              ....+.+||+.|||||++.+. .|+.++||||+
T Consensus       193 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSl  233 (361)
T 4f9c_A          193 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSA  233 (361)
T ss_dssp             -------------CCCCGGGCCHHHHTTCSCCCTHHHHHHH
T ss_pred             ccccccccccccccccCccccCHHHHcCCCCCCCccchhhh
Confidence                    112345899999999999875 58999999995

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.64  E-value=1.2e-17  Score=131.97  Aligned_cols=78  Identities=27%  Similarity=0.375  Sum_probs=66.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC--CCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE--GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      +...++.|+|..+++|||+|            ++||+++.+  +.+|++|||+++.+... ......+||+.|||||++.
T Consensus       263 qi~~al~ylH~~~iiHRDlK------------p~Nill~~~~~~~vKl~DFG~a~~~~~~-~~~~~~~GT~~y~APEv~~  329 (573)
T 3uto_A          263 QVCKGLCHMHENNYVHLDLK------------PENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAE  329 (573)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESSSSCCCEEECCCSSCEECCTT-SEEEEECSSGGGCCHHHHT
T ss_pred             HHHHHHHHHHHCCeeeccCC------------hhhccccCCCCCCEEEeeccceeEccCC-CceeeeEECccccCHHHhC
Confidence            34678889999999999999            669999754  78999999999877543 2344578999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++||||+
T Consensus       330 ~~~y~~~~DiWSl  342 (573)
T 3uto_A          330 GKPVGYYTDMWSV  342 (573)
T ss_dssp             TCCBCHHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999999985

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.62  E-value=4.8e-17  Score=123.33  Aligned_cols=78  Identities=31%  Similarity=0.501  Sum_probs=68.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|+|++            |+||+++.++.++|+|||+++............+||+.|+|||++.+..
T Consensus       162 i~~aL~~LH~~givHrDLK------------p~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~  229 (396)
T 4dc2_A          162 ISLALNYLHERGIIYRDLK------------LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED  229 (396)
T ss_dssp             HHHHHHHHHHTTCBCCCCC------------GGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCEEeccCC------------HHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCC
Confidence            3677889999999999999            6699999999999999999986444434456678999999999999999


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       230 ~~~~~Diwsl  239 (396)
T 4dc2_A          230 YGFSVDWWAL  239 (396)
T ss_dssp             BCTHHHHHHH
T ss_pred             CChHHHHHHH
Confidence            9999999985

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.61  E-value=8e-17  Score=119.72  Aligned_cols=79  Identities=32%  Similarity=0.542  Sum_probs=68.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       113 qi~~aL~~LH~~~ivHrDlk------------p~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  180 (337)
T 1o6l_A          113 EIVSALEYLHSRDVVYRDIK------------LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN  180 (337)
T ss_dssp             HHHHHHHHHHHTTCBCCCCC------------GGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred             HHHHHHHHHHHCCeecCcCC------------HHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCC
Confidence            34678889999999999999            669999999999999999998654433445567899999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       181 ~~~~~~Diwsl  191 (337)
T 1o6l_A          181 DYGRAVDWWGL  191 (337)
T ss_dssp             CBCTTHHHHHH
T ss_pred             CCCchhhcccc
Confidence            99999999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.60  E-value=1.1e-16  Score=120.48  Aligned_cols=78  Identities=33%  Similarity=0.546  Sum_probs=67.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+..
T Consensus       148 i~~aL~~LH~~givHrDlk------------p~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  215 (373)
T 2r5t_A          148 IASALGYLHSLNIVYRDLK------------PENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP  215 (373)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------GGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCceecCCC------------HHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCC
Confidence            3577889999999999999            6699999999999999999986544334455678999999999999989


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       216 ~~~~~Diwsl  225 (373)
T 2r5t_A          216 YDRTVDWWCL  225 (373)
T ss_dssp             CCTHHHHHHH
T ss_pred             CCchhhhHHH
Confidence            9999999985

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.60  E-value=3.6e-17  Score=122.33  Aligned_cols=78  Identities=36%  Similarity=0.545  Sum_probs=62.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|+|++            |+||+++.++.++++|||+++............+||+.|+|||++.+..
T Consensus       133 i~~aL~~LH~~givHrDlk------------p~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  200 (353)
T 3txo_A          133 IISALMFLHDKGIIYRDLK------------LDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML  200 (353)
T ss_dssp             HHHHHHHHHHTTCBCCCCC------------GGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHH
T ss_pred             HHHHHHHHHHCCCcccCCC------------HHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCC
Confidence            3677889999999999999            6699999999999999999986544334455678999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       201 ~~~~~Diwsl  210 (353)
T 3txo_A          201 YGPAVDWWAM  210 (353)
T ss_dssp             CTTHHHHHHH
T ss_pred             cCCccCCCcc
Confidence            9999999985

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.60  E-value=1e-16  Score=119.53  Aligned_cols=78  Identities=37%  Similarity=0.539  Sum_probs=67.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+..
T Consensus       127 i~~aL~~LH~~~ivHrDlk------------p~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  194 (345)
T 1xjd_A          127 IILGLQFLHSKGIVYRDLK------------LDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQK  194 (345)
T ss_dssp             HHHHHHHHHHTTCBCCCCC------------GGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCeEeCCCC------------hhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCC
Confidence            3677889999999999999            6699999999999999999986543333455678999999999999989


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       195 ~~~~~Diwsl  204 (345)
T 1xjd_A          195 YNHSVDWWSF  204 (345)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCChhhhHHH
Confidence            9999999985

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.60  E-value=9.9e-17  Score=119.92  Aligned_cols=79  Identities=32%  Similarity=0.430  Sum_probs=67.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       129 qi~~aL~~LH~~givHrDlk------------p~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  196 (353)
T 2i0e_A          129 EIAIGLFFLQSKGIIYRDLK------------LDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ  196 (353)
T ss_dssp             HHHHHHHHHHHTTCBCCCCC------------GGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCEEeccCC------------HHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCC
Confidence            34678889999999999999            669999999999999999998644333344567899999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       197 ~~~~~~Diwsl  207 (353)
T 2i0e_A          197 PYGKSVDWWAF  207 (353)
T ss_dssp             CBSTHHHHHHH
T ss_pred             CcCCcccccch
Confidence            99999999985

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.59  E-value=1.3e-16  Score=118.90  Aligned_cols=78  Identities=31%  Similarity=0.501  Sum_probs=67.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++............+||+.|+|||++.+..
T Consensus       119 i~~aL~~LH~~~ivHrDlk------------p~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  186 (345)
T 3a8x_A          119 ISLALNYLHERGIIYRDLK------------LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED  186 (345)
T ss_dssp             HHHHHHHHHHTTCBCCCCC------------GGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCceecCCC------------HHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCC
Confidence            3677889999999999999            6699999999999999999986443333455678999999999999989


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       187 ~~~~~Diwsl  196 (345)
T 3a8x_A          187 YGFSVDWWAL  196 (345)
T ss_dssp             BCTHHHHHHH
T ss_pred             CChHHhHHHH
Confidence            9999999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.58  E-value=1.2e-16  Score=119.84  Aligned_cols=79  Identities=11%  Similarity=0.113  Sum_probs=66.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-----------CCCeEEeeeeccccccc--ccCCCccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-----------EGHAKLADFGVAGQLTD--TMAKRNTVIG  153 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-----------~~~~~l~dfg~~~~~~~--~~~~~~~~~g  153 (177)
                      ....++.++|..+++|+|++            |+||+++.           ++.++++|||+++.+..  ........+|
T Consensus       180 qi~~~L~~lH~~~ivHrDiK------------p~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~g  247 (365)
T 3e7e_A          180 RMLYMIEQVHDCEIIHGDIK------------PDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCE  247 (365)
T ss_dssp             HHHHHHHHHHTTTEECCCCS------------GGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSC
T ss_pred             HHHHHHHHHhhCCeecCCCC------------HHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecC
Confidence            34678889999999999999            66999988           89999999999976532  1223345679


Q ss_pred             cccccccccccCCCCCccceEecC
Q psy3254         154 TPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       154 ~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      |+.|+|||++.+..|+.++|||||
T Consensus       248 t~~y~aPE~~~~~~~~~~~Diwsl  271 (365)
T 3e7e_A          248 TSGFQCVEMLSNKPWNYQIDYFGV  271 (365)
T ss_dssp             TTSCCCHHHHTTCCBSTHHHHHHH
T ss_pred             CCCCCChHHhcCCCCCccccHHHH
Confidence            999999999999889999999985

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.57  E-value=1.7e-16  Score=127.56  Aligned_cols=77  Identities=32%  Similarity=0.470  Sum_probs=67.4

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY  168 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~  168 (177)
                      ..++.++|..+++|+|++            ++||+++.++.++|+|||+++..........+.+||+.|+|||++.+..|
T Consensus       452 ~~aL~~LH~~gIiHrDLK------------p~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~  519 (674)
T 3pfq_A          452 AIGLFFLQSKGIIYRDLK------------LDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPY  519 (674)
T ss_dssp             HHHHHHHHHTSEECCCCC------------STTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCB
T ss_pred             HHHHHHHHhCCeEeccCC------------hhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCC
Confidence            577889999999999999            66999999999999999999865443344556789999999999999999


Q ss_pred             CccceEecC
Q psy3254         169 DCVADMWSL  177 (177)
Q Consensus       169 ~~~~Diws~  177 (177)
                      +.++|||||
T Consensus       520 ~~~~DvwSl  528 (674)
T 3pfq_A          520 GKSVDWWAF  528 (674)
T ss_dssp             STHHHHHHH
T ss_pred             CccceEech
Confidence            999999985

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.57  E-value=2.4e-16  Score=115.08  Aligned_cols=78  Identities=44%  Similarity=0.802  Sum_probs=68.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++++|||+++............+||+.|+|||++.+..
T Consensus       125 i~~~l~~lH~~~i~H~Dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  192 (297)
T 3fxz_A          125 CLQALEFLHSNQVIHRDIK------------SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  192 (297)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSC
T ss_pred             HHHHHHHHHhCCceeCCCC------------HHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCC
Confidence            3678889999999999999            6699999999999999999987665444455678999999999999989


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       193 ~~~~~Diwsl  202 (297)
T 3fxz_A          193 YGPKVDIWSL  202 (297)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCcHHHHHHH
Confidence            9999999985

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.56  E-value=2.6e-16  Score=121.60  Aligned_cols=78  Identities=28%  Similarity=0.432  Sum_probs=61.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...+++++|..+++|+|++            ++||+++.++.++|+|||+++..... ......+||+.|+|||++.+.
T Consensus       172 qil~aL~~lH~~~iiHrDlk------------p~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  238 (464)
T 3ttj_A          172 QMLCGIKHLHSAGIIHRDLK------------PSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  238 (464)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTSCEEECCCCCC-----C-CCC----CCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCcccCCCC------------hHhEEEeCCCCEEEEEEEeeeecCCC-cccCCCcccccccCHHHHcCC
Confidence            34678889999999999999            66999999999999999999876543 234457899999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++||||+
T Consensus       239 ~~~~~~DiwSl  249 (464)
T 3ttj_A          239 GYKENVDIWSV  249 (464)
T ss_dssp             CCCTTHHHHHH
T ss_pred             CCCHHHHHHHH
Confidence            99999999985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.56  E-value=3e-16  Score=123.15  Aligned_cols=79  Identities=29%  Similarity=0.450  Sum_probs=68.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++.+..........+||+.|+|||++.+.
T Consensus       297 qi~~aL~~LH~~gIvHrDLK------------P~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~  364 (543)
T 3c4z_A          297 QIVSGLEHLHQRNIIYRDLK------------PENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE  364 (543)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTC
T ss_pred             HHHHHHHHHHHcCCcccCCC------------hHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCC
Confidence            34678889999999999999            669999999999999999998765543344456899999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       365 ~~~~~~DiwSl  375 (543)
T 3c4z_A          365 EYDFSVDYFAL  375 (543)
T ss_dssp             CBCTHHHHHHH
T ss_pred             CCChHHhcCcc
Confidence            99999999985

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.56  E-value=2.9e-16  Score=120.72  Aligned_cols=78  Identities=31%  Similarity=0.550  Sum_probs=65.1

Q ss_pred             hHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|. .+++|+|++            |+||+++.++.++|+|||+++............+||+.|+|||++.+.
T Consensus       257 i~~aL~~LH~~~giiHrDlk------------p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  324 (446)
T 4ejn_A          257 IVSALDYLHSEKNVVYRDLK------------LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN  324 (446)
T ss_dssp             HHHHHHHHHHHTCCCCCCCC------------GGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTS
T ss_pred             HHHHHHHHhhcCCEEECCCC------------HHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCC
Confidence            3677889997 889999999            669999999999999999998654443445567899999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       325 ~~~~~~Diwsl  335 (446)
T 4ejn_A          325 DYGRAVDWWGL  335 (446)
T ss_dssp             CCCTHHHHHHH
T ss_pred             CCCCccchhhh
Confidence            99999999985

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.56  E-value=2.1e-16  Score=124.79  Aligned_cols=78  Identities=18%  Similarity=0.191  Sum_probs=56.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +..+++.++|..+++|||+|            |+||+++.+|.+||+|||+++..........+.+||+.|||||++.+ 
T Consensus       347 QIl~AL~ylH~~GIIHRDIK------------PeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-  413 (569)
T 4azs_A          347 SLLRSLAALEKQGFWHDDVR------------PWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-  413 (569)
T ss_dssp             HHHHHHHHHHHTTCEESCCC------------GGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHCCceeccCc------------hHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-
Confidence            55889999999999999999            67999999999999999999977655455566889999999999976 


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .+..++|+||+
T Consensus       414 ~~~~~~d~~s~  424 (569)
T 4azs_A          414 NKSWNGFWRSA  424 (569)
T ss_dssp             -----------
T ss_pred             CCCCccccccc
Confidence            35677899974

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.55  E-value=2.8e-16  Score=118.68  Aligned_cols=79  Identities=34%  Similarity=0.544  Sum_probs=63.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc---------------------c
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT---------------------M  145 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~---------------------~  145 (177)
                      +...+++++|..+++|+|++            |+||+++.++.++++|||+++.+...                     .
T Consensus       117 qi~~~L~~LH~~~ivHrDlk------------p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (388)
T 3oz6_A          117 QLIKVIKYLHSGGLLHRDMK------------PSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ  184 (388)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC----------
T ss_pred             HHHHHHHHHHhCCEEeCCCC------------HHHeEEcCCCCEEecCCccccccccccccccccccccccccccccccc
Confidence            44678899999999999999            66999999999999999999865321                     1


Q ss_pred             CCCccccccccccccccccC-CCCCccceEecC
Q psy3254         146 AKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       146 ~~~~~~~g~~~y~aPe~~~~-~~~~~~~Diws~  177 (177)
                      ......+||++|+|||++.+ ..|+.++||||+
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl  217 (388)
T 3oz6_A          185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSL  217 (388)
T ss_dssp             -----CCCGGGGCCHHHHTTCCCCCTHHHHHHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCChhhHHHH
Confidence            11234689999999999986 679999999985

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.55  E-value=3.7e-16  Score=120.45  Aligned_cols=79  Identities=25%  Similarity=0.394  Sum_probs=61.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---------------------  145 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------  145 (177)
                      ....+++++|..+++|+|++            |+||+++.++.++|+|||+++......                     
T Consensus       164 qi~~aL~~LH~~~iiHrDlK------------p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (458)
T 3rp9_A          164 NLLVGVKYVHSAGILHRDLK------------PANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP  231 (458)
T ss_dssp             HHHHHHHHHHHTTCBCCCCC------------GGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC--------------
T ss_pred             HHHHHHHHHHhCCcCCCCCC------------hhhEEECCCCCEeecccccchhccCccccccccccCcccccccccccc
Confidence            34678889999999999999            669999999999999999998654221                     


Q ss_pred             ------CCCcccccccccccccccc-CCCCCccceEecC
Q psy3254         146 ------AKRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSL  177 (177)
Q Consensus       146 ------~~~~~~~g~~~y~aPe~~~-~~~~~~~~Diws~  177 (177)
                            ......+||++|+|||++. ...|+.++|||||
T Consensus       232 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSl  270 (458)
T 3rp9_A          232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI  270 (458)
T ss_dssp             -------------CCCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred             ccccccccccCCcccccccChHHhhCCCCCCcHhHHHHH
Confidence                  1123467899999999874 5679999999985

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.54  E-value=6.3e-16  Score=112.40  Aligned_cols=79  Identities=28%  Similarity=0.427  Sum_probs=67.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       109 ql~~~l~~lH~~~ivH~dik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  176 (292)
T 3o0g_A          109 QLLKGLGFCHSRNVLHRDLK------------PQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA  176 (292)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCC
Confidence            34678889999999999999            669999999999999999998765444444556899999999999875


Q ss_pred             C-CCccceEecC
Q psy3254         167 G-YDCVADMWSL  177 (177)
Q Consensus       167 ~-~~~~~Diws~  177 (177)
                      . ++.++||||+
T Consensus       177 ~~~~~~~Diwsl  188 (292)
T 3o0g_A          177 KLYSTSIDMWSA  188 (292)
T ss_dssp             SCCCTHHHHHHH
T ss_pred             CCcCchHHHHHH
Confidence            5 8999999985

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.54  E-value=5.5e-16  Score=114.65  Aligned_cols=78  Identities=33%  Similarity=0.463  Sum_probs=62.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+..
T Consensus       130 i~~al~~lH~~~ivH~Dlk------------p~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  197 (327)
T 3a62_A          130 ISMALGHLHQKGIIYRDLK------------PENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG  197 (327)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------TTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSC
T ss_pred             HHHHHHHHHhCCEEcccCC------------HHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCC
Confidence            3677889999999999999            6699999999999999999986544333344568999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       198 ~~~~~Diwsl  207 (327)
T 3a62_A          198 HNRAVDWWSL  207 (327)
T ss_dssp             CCTHHHHHHH
T ss_pred             CCCcccchhH
Confidence            9999999985

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.54  E-value=3.9e-16  Score=119.73  Aligned_cols=78  Identities=31%  Similarity=0.506  Sum_probs=65.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCcccccccccccccccc--
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~--  164 (177)
                      ...++.++|..+++|+|++            |+||+++.++.+|++|||+++....... .....+||+.|+|||++.  
T Consensus       184 i~~aL~~LH~~giiHrDLK------------p~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~  251 (437)
T 4aw2_A          184 MVIAIDSVHQLHYVHRDIK------------PDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM  251 (437)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHH
T ss_pred             HHHHHHHHHhCCeEecccC------------HHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhc
Confidence            4678889999999999999            6699999999999999999986644322 233468999999999997  


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         ...|+.++|||||
T Consensus       252 ~~~~~~~~~~~DvwSl  267 (437)
T 4aw2_A          252 EGGKGRYGPECDWWSL  267 (437)
T ss_dssp             HTSCCEECTHHHHHHH
T ss_pred             ccCCCCCCCcCeeHHH
Confidence               4568999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.53  E-value=4.1e-16  Score=118.74  Aligned_cols=78  Identities=33%  Similarity=0.565  Sum_probs=65.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|+|++            |+||+++.++.++++|||+++.+..... ...+.+||+.|+|||++.+.
T Consensus       177 i~~aL~~LH~~givHrDLK------------p~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~  244 (410)
T 3v8s_A          177 VVLALDAIHSMGFIHRDVK------------PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQ  244 (410)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTT
T ss_pred             HHHHHHHHHHCCeEeccCC------------HHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhcc
Confidence            3677889999999999999            6699999999999999999987654321 23467899999999999865


Q ss_pred             C----CCccceEecC
Q psy3254         167 G----YDCVADMWSL  177 (177)
Q Consensus       167 ~----~~~~~Diws~  177 (177)
                      .    |+.++|||||
T Consensus       245 ~~~~~~~~~~DiwSl  259 (410)
T 3v8s_A          245 GGDGYYGRECDWWSV  259 (410)
T ss_dssp             TTTCEEETHHHHHHH
T ss_pred             CCCcCCCCcceEecc
Confidence            4    8899999985

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.53  E-value=1.4e-15  Score=114.94  Aligned_cols=77  Identities=35%  Similarity=0.602  Sum_probs=65.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC--
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~--  165 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.+... ......+||+.|+|||++..  
T Consensus       124 i~~aL~~LH~~givHrDlk------------p~NIll~~~g~vkL~DFG~a~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~  190 (384)
T 4fr4_A          124 LVMALDYLQNQRIIHRDMK------------PDNILLDEHGHVHITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRK  190 (384)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECCTT-CCBCCCCSCGGGCCGGGTCCCS
T ss_pred             HHHHHHHHHHCCceeccCc------------HHHeEECCCCCEEEeccceeeeccCC-CceeccCCCccccCCeeeccCC
Confidence            4678889999999999999            66999999999999999999876543 33456789999999999963  


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..|+.++|||||
T Consensus       191 ~~~~~~~~DiwSl  203 (384)
T 4fr4_A          191 GAGYSFAVDWWSL  203 (384)
T ss_dssp             SCCBCTTHHHHHH
T ss_pred             CCCCCccceeech
Confidence             458999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.53  E-value=8.9e-16  Score=117.99  Aligned_cols=78  Identities=28%  Similarity=0.411  Sum_probs=66.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC---CCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN---TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ..+++.++|..+++|+|++            |+||+++   .++.++++|||+++............+||+.|+|||++.
T Consensus       119 il~aL~~lH~~givHrDlK------------p~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~  186 (444)
T 3soa_A          119 ILEAVLHCHQMGVVHRNLK------------PENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR  186 (444)
T ss_dssp             HHHHHHHHHHTTCBCCCCS------------STTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHCCccccCCC------------HHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhc
Confidence            4678889999999999999            6699998   457899999999987665444445578999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++||||+
T Consensus       187 ~~~~~~~~DIwSl  199 (444)
T 3soa_A          187 KDPYGKPVDLWAC  199 (444)
T ss_dssp             TCCBCTHHHHHHH
T ss_pred             CCCCCCccccHHH
Confidence            8899999999985

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.53  E-value=8.9e-16  Score=113.21  Aligned_cols=76  Identities=37%  Similarity=0.577  Sum_probs=66.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.....   ....+||+.|+|||++.+.
T Consensus       114 qi~~aL~~LH~~~ivHrDlk------------p~NIll~~~g~~kL~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~  178 (318)
T 1fot_A          114 EVCLALEYLHSKDIIYRDLK------------PENILLDKNGHIKITDFGFAKYVPDV---TYTLCGTPDYIAPEVVSTK  178 (318)
T ss_dssp             HHHHHHHHHHTTTEECCCCC------------GGGEEECTTSCEEECCCSSCEECSSC---BCCCCSCTTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCccccCCC------------hheEEEcCCCCEEEeecCcceecCCc---cccccCCccccCHhHhcCC
Confidence            34678889999999999999            66999999999999999999865432   3356899999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       179 ~~~~~~Diwsl  189 (318)
T 1fot_A          179 PYNKSIDWWSF  189 (318)
T ss_dssp             CBCTTHHHHHH
T ss_pred             CCCcccchhhh
Confidence            99999999985

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.52  E-value=1e-15  Score=112.05  Aligned_cols=78  Identities=35%  Similarity=0.496  Sum_probs=67.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++..... ......+||+.|+|||++.+.
T Consensus       128 qi~~al~~lH~~~ivH~Dlk------------p~Nil~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  194 (308)
T 3g33_A          128 QFLRGLDFLHANCIVHRDLK------------PENILVTSGGTVKLADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQS  194 (308)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------TTTEEECTTSCEEECSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTS
T ss_pred             HHHHHHHHHHHCCcccCCCC------------HHHEEEcCCCCEEEeeCccccccCCC-cccCCccccccccCchHHcCC
Confidence            34678889999999999999            66999999999999999999865433 233456899999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       195 ~~~~~~Diwsl  205 (308)
T 3g33_A          195 TYATPVDMWSV  205 (308)
T ss_dssp             CCCSTHHHHHH
T ss_pred             CCCchHHHHHH
Confidence            99999999985

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.52  E-value=6.3e-16  Score=117.77  Aligned_cols=78  Identities=31%  Similarity=0.469  Sum_probs=65.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCcccccccccccccccc--
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~--  164 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++++|||+++.+..... .....+||+.|+|||++.  
T Consensus       171 i~~aL~~LH~~giiHrDLK------------p~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~  238 (412)
T 2vd5_A          171 IVMAIDSVHRLGYVHRDIK------------PDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV  238 (412)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHH
T ss_pred             HHHHHHHHHHCCeeecccC------------HHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhc
Confidence            4677889999999999999            6699999999999999999987654322 233468999999999997  


Q ss_pred             -----CCCCCccceEecC
Q psy3254         165 -----EIGYDCVADMWSL  177 (177)
Q Consensus       165 -----~~~~~~~~Diws~  177 (177)
                           ...|+.++|||||
T Consensus       239 ~~~~~~~~~~~~~DiwSl  256 (412)
T 2vd5_A          239 GGGPGTGSYGPECDWWAL  256 (412)
T ss_dssp             HTCTTCSEECTHHHHHHH
T ss_pred             ccCcCCCCCChHHhhhHH
Confidence                 3568999999985

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.52  E-value=1.1e-15  Score=112.86  Aligned_cols=78  Identities=40%  Similarity=0.768  Sum_probs=67.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++++|||+++............+||+.|+|||++.+..
T Consensus       150 i~~~L~~LH~~~ivH~Dlk------------p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  217 (321)
T 2c30_A          150 VLQALAYLHAQGVIHRDIK------------SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSL  217 (321)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCeecCCCC------------HHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCC
Confidence            3577889999999999999            6699999999999999999987655433445568999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       218 ~~~~~Dv~sl  227 (321)
T 2c30_A          218 YATEVDIWSL  227 (321)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCchhhHHHH
Confidence            9999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.52  E-value=1.3e-15  Score=115.60  Aligned_cols=77  Identities=35%  Similarity=0.527  Sum_probs=59.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|+|++            ++||+++.   ++.++++|||+++..... ......+||+.|+|||++.
T Consensus       170 i~~aL~~LH~~~ivHrDlk------------p~Nill~~~~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~  236 (400)
T 1nxk_A          170 IGEAIQYLHSINIAHRDVK------------PENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVLG  236 (400)
T ss_dssp             HHHHHHHHHHTTEECCCCC------------GGGEEESSSSTTCCEEECCCTTCEECC------------CTTCCGGGSC
T ss_pred             HHHHHHHHHHCCccccCcC------------cceEEEecCCCCccEEEEecccccccCCC-CccccCCCCCCccCHhhcC
Confidence            3678889999999999999            66999987   788999999999865432 2334568999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       237 ~~~~~~~~Diwsl  249 (400)
T 1nxk_A          237 PEKYDKSCDMWSL  249 (400)
T ss_dssp             CCCSSSHHHHHHH
T ss_pred             CCCCCCcccHHHH
Confidence            8899999999985

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.52  E-value=1.3e-15  Score=111.94  Aligned_cols=79  Identities=27%  Similarity=0.435  Sum_probs=65.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++............+||+.|+|||++.+ 
T Consensus       127 qi~~~l~~LH~~~ivH~Dik------------p~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  194 (311)
T 3niz_A          127 QLLRGVAHCHQHRILHRDLK------------PQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS  194 (311)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCcccCCCc------------hHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCC
Confidence            34678889999999999999            66999999999999999999876544334445678999999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       195 ~~~~~~~Diwsl  206 (311)
T 3niz_A          195 KKYSTSVDIWSI  206 (311)
T ss_dssp             CSCCTHHHHHHH
T ss_pred             CCCCchHHhHHH
Confidence            568999999985

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.52  E-value=1.3e-15  Score=113.75  Aligned_cols=79  Identities=32%  Similarity=0.512  Sum_probs=66.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC---eEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|+|++            |+||+++.++.   ++++|||+++............+||+.|+|||++
T Consensus       138 qi~~al~~lH~~~ivHrDlk------------p~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~  205 (351)
T 3c0i_A          138 QILEALRYCHDNNIIHRDVK------------PHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV  205 (351)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHCCceeccCC------------hHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHH
Confidence            34678889999999999999            66999976554   9999999998766543334556899999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++|||||
T Consensus       206 ~~~~~~~~~Diwsl  219 (351)
T 3c0i_A          206 KREPYGKPVDVWGC  219 (351)
T ss_dssp             TTCCBCTHHHHHHH
T ss_pred             cCCCCCchHhhHHH
Confidence            98889999999985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.51  E-value=1.7e-15  Score=111.46  Aligned_cols=79  Identities=28%  Similarity=0.452  Sum_probs=66.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      +...++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+ 
T Consensus       116 qi~~aL~~lH~~~ivH~Dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  183 (317)
T 2pmi_A          116 QLLQGLAFCHENKILHRDLK------------PQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS  183 (317)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCeeeCCCC------------hHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCC
Confidence            45778899999999999999            66999999999999999999876544333445679999999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       184 ~~~~~~~Diwsl  195 (317)
T 2pmi_A          184 RTYSTSIDIWSC  195 (317)
T ss_dssp             CCCCTHHHHHHH
T ss_pred             CCCCcHHHHHHH
Confidence            468999999985

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.51  E-value=1.3e-15  Score=113.81  Aligned_cols=75  Identities=32%  Similarity=0.518  Sum_probs=65.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++.....   ....+||+.|+|||++.+..
T Consensus       150 i~~aL~~LH~~~ivHrDlk------------p~NIll~~~g~~kL~DFg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~  214 (350)
T 1rdq_E          150 IVLTFEYLHSLDLIYRDLK------------PENLLIDQQGYIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIILSKG  214 (350)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECSSC---BCCCEECGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCcccccCc------------cceEEECCCCCEEEcccccceeccCC---cccccCCccccCHHHhcCCC
Confidence            3677889999999999999            66999999999999999999875432   33568999999999999989


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       215 ~~~~~Diwsl  224 (350)
T 1rdq_E          215 YNKAVDWWAL  224 (350)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCCcCCEecc
Confidence            9999999985

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.51  E-value=1.2e-15  Score=112.92  Aligned_cols=77  Identities=31%  Similarity=0.531  Sum_probs=65.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|+|++            |+||+++.++.++++|||+++..... ......+||+.|+|||++.+..
T Consensus       123 i~~al~~lH~~~ivHrDlk------------p~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  189 (328)
T 3fe3_A          123 IVSAVQYCHQKRIVHRDLK------------AENLLLDADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQGKK  189 (328)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEECTTSCEEECSTTCCGGGSSS-CGGGTTSSSGGGCCHHHHHTCC
T ss_pred             HHHHHHHHHHCCEeccCCC------------HHHEEEcCCCCEEEeeccCceecCCC-CccccccCCcceeCcccccCCC
Confidence            4678889999999999999            66999999999999999999865443 2344568999999999998877


Q ss_pred             CC-ccceEecC
Q psy3254         168 YD-CVADMWSL  177 (177)
Q Consensus       168 ~~-~~~Diws~  177 (177)
                      ++ .++||||+
T Consensus       190 ~~~~~~Diwsl  200 (328)
T 3fe3_A          190 YDGPEVDVWSL  200 (328)
T ss_dssp             CCSHHHHHHHH
T ss_pred             cCCchhhhhhh
Confidence            65 78999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.51  E-value=1.5e-15  Score=111.95  Aligned_cols=79  Identities=29%  Similarity=0.471  Sum_probs=65.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc------------CCCcccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM------------AKRNTVIGT  154 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~------------~~~~~~~g~  154 (177)
                      ....++.++|..+++|+|++            |+||+++.++.++++|||+++......            ......+||
T Consensus       172 qi~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          172 QIAEAVEFLHSKGLMHRDLK------------PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             HHHHHHHHHHhCCeeecCCC------------cccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            45788899999999999999            669999999999999999998765431            122345799


Q ss_pred             ccccccccccCCCCCccceEecC
Q psy3254         155 PFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       155 ~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      +.|+|||++.+..++.++|||||
T Consensus       240 ~~y~aPE~~~~~~~~~~~Di~sl  262 (332)
T 3qd2_B          240 KLYMSPEQIHGNNYSHKVDIFSL  262 (332)
T ss_dssp             GGGSCHHHHHCCCCCTHHHHHHH
T ss_pred             cCccChHHhcCCCCcchhhHHHH
Confidence            99999999999899999999985

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.51  E-value=1.3e-15  Score=111.76  Aligned_cols=79  Identities=27%  Similarity=0.467  Sum_probs=57.1

Q ss_pred             chHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+  ++|++++            ++||+++.++.++++|||+++.............||+.|+|||++.
T Consensus       145 qi~~aL~~LH~~~~~ivH~Dik------------p~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~  212 (309)
T 3p86_A          145 DVAKGMNYLHNRNPPIVHRNLK------------SPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLR  212 (309)
T ss_dssp             HHHHHHHHHHTSSSCCCCTTCC------------GGGEEECTTCCEEECCCC-----------------CCTTSCHHHHT
T ss_pred             HHHHHHHHHHcCCCCEECCCCC------------hhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhc
Confidence            3467788999999  9999999            6699999999999999999986544333344567999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       213 ~~~~~~~~Diwsl  225 (309)
T 3p86_A          213 DEPSNEKSDVYSF  225 (309)
T ss_dssp             TCCCCTTHHHHHH
T ss_pred             CCCCCchhhHHHH
Confidence            9889999999985

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.51  E-value=1.2e-15  Score=116.82  Aligned_cols=79  Identities=27%  Similarity=0.397  Sum_probs=62.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--------------------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--------------------  146 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------  146 (177)
                      ....+++++|..+++|+|++            |+||+++.++.++++|||+++.......                    
T Consensus       137 qil~aL~~LH~~givHrDlk------------p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (432)
T 3n9x_A          137 NLLLGENFIHESGIIHRDLK------------PANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL  204 (432)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEEC-------------------------
T ss_pred             HHHHHHHHHHHCCCCCCCCC------------HHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccch
Confidence            34688889999999999999            6699999999999999999987643211                    


Q ss_pred             --CCcccccccccccccccc-CCCCCccceEecC
Q psy3254         147 --KRNTVIGTPFWMAPEVIQ-EIGYDCVADMWSL  177 (177)
Q Consensus       147 --~~~~~~g~~~y~aPe~~~-~~~~~~~~Diws~  177 (177)
                        .....+||++|+|||++. ...|+.++||||+
T Consensus       205 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSl  238 (432)
T 3n9x_A          205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWST  238 (432)
T ss_dssp             ------CCCCCTTCCHHHHTTCSCCCTHHHHHHH
T ss_pred             hccccCCCCCccccCHHHHhcCCCCCcccccchH
Confidence              124578999999999874 5679999999985

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.50  E-value=9.7e-16  Score=113.60  Aligned_cols=73  Identities=19%  Similarity=0.211  Sum_probs=62.7

Q ss_pred             chHHHHhhhc-hhhHHHHHhhhchHHHHHHHHhhcceEeCCCC--------------------CeEEeeeeccccccccc
Q psy3254          87 CDFEFLKFLS-YDDLQHRMANLDCEMEREIEQLRRNILLNTEG--------------------HAKLADFGVAGQLTDTM  145 (177)
Q Consensus        87 ~~~~~l~~l~-~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~--------------------~~~l~dfg~~~~~~~~~  145 (177)
                      +...++.++| ..+++|+|+|            |+||+++.++                    .+||+|||+++..... 
T Consensus       169 qi~~aL~~lH~~~~ivHrDlK------------p~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-  235 (336)
T 2vuw_A          169 QLTASLAVAEASLRFEHRDLH------------WGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-  235 (336)
T ss_dssp             HHHHHHHHHHHHHCCBCSCCC------------GGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-
T ss_pred             HHHHHHHHHHHhCCEeECCCC------------HHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-
Confidence            4478889999 8999999999            6799999887                    8999999999865432 


Q ss_pred             CCCccccccccccccccccCCCCCccceEecC
Q psy3254         146 AKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       146 ~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                          ..+||+.|+|||++.+.. +.++||||+
T Consensus       236 ----~~~gt~~y~aPE~~~g~~-~~~~Diwsl  262 (336)
T 2vuw_A          236 ----IVVFCDVSMDEDLFTGDG-DYQFDIYRL  262 (336)
T ss_dssp             ----EEECCCCTTCSGGGCCCS-SHHHHHHHH
T ss_pred             ----cEEEeecccChhhhcCCC-ccceehhhh
Confidence                458999999999998766 889999985

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.50  E-value=1.5e-15  Score=113.80  Aligned_cols=79  Identities=18%  Similarity=0.218  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC--CCCCeEEeeeecccccccccC-------CCccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN--TEGHAKLADFGVAGQLTDTMA-------KRNTVIGTPFW  157 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~--~~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~y  157 (177)
                      ....++.++|..+++|+|++            ++||+++  .++.++|+|||+++.+.....       .....+||+.|
T Consensus       160 qi~~~l~~lH~~~iiHrDlk------------p~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y  227 (364)
T 3op5_A          160 RILDILEYIHEHEYVHGDIK------------ASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEF  227 (364)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTT
T ss_pred             HHHHHHHHHHHCCeEEecCC------------HHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCc
Confidence            34678889999999999999            6699998  889999999999987643211       11335699999


Q ss_pred             cccccccCCCCCccceEecC
Q psy3254         158 MAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       158 ~aPe~~~~~~~~~~~Diws~  177 (177)
                      +|||++.+..++.++|||||
T Consensus       228 ~aPE~~~~~~~~~~~Di~sl  247 (364)
T 3op5_A          228 TSIDAHNGVAPSRRGDLEIL  247 (364)
T ss_dssp             CCHHHHTTCCCCHHHHHHHH
T ss_pred             cCHHHhCCCCCCchhhHHHH
Confidence            99999999889999999995

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.50  E-value=2.3e-15  Score=111.86  Aligned_cols=77  Identities=31%  Similarity=0.469  Sum_probs=65.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|+|++            |+||+++.++.++++|||+++..... ......+||+.|+|||++.+..
T Consensus       117 i~~aL~~LH~~givH~Dlk------------p~NIll~~~~~~kl~DFG~s~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  183 (336)
T 3h4j_B          117 IICAIEYCHRHKIVHRDLK------------PENLLLDDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVINGKL  183 (336)
T ss_dssp             HHHHHHHHHHHTCCCCCCS------------TTTEEECTTCCEEECCSSCTBTTTTS-BTTCCCTTSTTTSCGGGSCCSG
T ss_pred             HHHHHHHHHHCCeEecCCc------------hhhEEEcCCCCEEEEEeccceeccCC-cccccccCCcCcCCHHHHcCCC
Confidence            4678889999999999999            66999999999999999999866543 2334568999999999998877


Q ss_pred             C-CccceEecC
Q psy3254         168 Y-DCVADMWSL  177 (177)
Q Consensus       168 ~-~~~~Diws~  177 (177)
                      + +.++|||||
T Consensus       184 ~~~~~~Diwsl  194 (336)
T 3h4j_B          184 YAGPEVDVWSC  194 (336)
T ss_dssp             GGCHHHHHHHH
T ss_pred             CCCCccchhHH
Confidence            6 689999985

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.50  E-value=1.1e-15  Score=114.72  Aligned_cols=76  Identities=13%  Similarity=0.182  Sum_probs=64.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|+|++            |+||+++.++.++++|||+++.....   .....||+.|+|||++.+ 
T Consensus       202 qi~~aL~~LH~~~ivHrDik------------p~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~  266 (371)
T 3q60_A          202 QLIRLAANLQSKGLVHGHFT------------PDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNAS  266 (371)
T ss_dssp             HHHHHHHHHHHTTEEETTCS------------GGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCS
T ss_pred             HHHHHHHHHHHCCCccCcCC------------HHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCC
Confidence            45788899999999999999            66999999999999999999865432   113456799999999987 


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..|+.++|||||
T Consensus       267 ~~~~~~~~DiwSl  279 (371)
T 3q60_A          267 TATFTHALNAWQL  279 (371)
T ss_dssp             EEECCHHHHHHHH
T ss_pred             CCCcCccccHHHH
Confidence             679999999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.50  E-value=1.2e-15  Score=120.19  Aligned_cols=77  Identities=30%  Similarity=0.455  Sum_probs=66.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++++|||+++.+... ......+||+.|+|||++.+..
T Consensus       295 Il~aL~yLH~~gIvHrDLK------------PeNILld~~g~vKL~DFGla~~~~~~-~~~~~~~GT~~Y~APEvl~~~~  361 (576)
T 2acx_A          295 ICCGLEDLHRERIVYRDLK------------PENILLDDHGHIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVKNER  361 (576)
T ss_dssp             HHHHHHHHHHTTEECCCCC------------GGGEEECTTSCEEECCCTTCEECCTT-CCEECCCSCGGGCCHHHHTTCE
T ss_pred             HHHHHHHHHHCCEeccCCc------------hheEEEeCCCCeEEEecccceecccC-ccccccCCCccccCHHHHcCCC
Confidence            4678889999999999999            66999999999999999999876543 2233468999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       362 ~~~~~DiwSL  371 (576)
T 2acx_A          362 YTFSPDWWAL  371 (576)
T ss_dssp             ESSHHHHHHH
T ss_pred             CCccchHHHH
Confidence            9999999985

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=2.5e-15  Score=111.88  Aligned_cols=79  Identities=29%  Similarity=0.455  Sum_probs=67.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.+..........+||+.|+|||++.+ 
T Consensus       120 qi~~~l~~lH~~~ivH~Dlk------------p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  187 (346)
T 1ua2_A          120 MTLQGLEYLHQHWILHRDLK------------PNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA  187 (346)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCEECCCCC------------HHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCC
Confidence            34678899999999999999            66999999999999999999876554444455689999999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       188 ~~~~~~~Diwsl  199 (346)
T 1ua2_A          188 RMYGVGVDMWAV  199 (346)
T ss_dssp             SCCCHHHHHHHH
T ss_pred             CCCCchhhhHhH
Confidence            458999999985

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.50  E-value=1.2e-15  Score=110.71  Aligned_cols=79  Identities=29%  Similarity=0.461  Sum_probs=62.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.............||+.|+|||++.+ 
T Consensus       108 qi~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  175 (288)
T 1ob3_A          108 QLLNGIAYCHDRRVLHRDLK------------PQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS  175 (288)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCC
Confidence            44678889999999999999            66999999999999999999876543333345678999999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       176 ~~~~~~~Diwsl  187 (288)
T 1ob3_A          176 KKYSTTIDIWSV  187 (288)
T ss_dssp             CSCCTHHHHHHH
T ss_pred             CCCCcHHHHHHH
Confidence            458999999985

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.50  E-value=2e-15  Score=110.87  Aligned_cols=77  Identities=34%  Similarity=0.500  Sum_probs=62.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++..... .......||+.|+|||++.+ 
T Consensus       165 qi~~aL~~LH~~~ivH~Dik------------p~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-  230 (311)
T 3p1a_A          165 DTLLALAHLHSQGLVHLDVK------------PANIFLGPRGRCKLGDFGLLVELGTA-GAGEVQEGDPRYMAPELLQG-  230 (311)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEECGGGCEEECCCTTCEECC-------CCCCCGGGCCGGGGGT-
T ss_pred             HHHHHHHHHHHCCEecCCCC------------HHHEEECCCCCEEEccceeeeecccC-CCCcccCCCccccCHhHhcC-
Confidence            34678889999999999999            66999999999999999999766443 22344579999999999876 


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       231 ~~~~~~Diwsl  241 (311)
T 3p1a_A          231 SYGTAADVFSL  241 (311)
T ss_dssp             CCSTHHHHHHH
T ss_pred             CCCchhhHHHH
Confidence            78999999985

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.49  E-value=1.9e-15  Score=110.74  Aligned_cols=79  Identities=34%  Similarity=0.574  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--------------Ccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--------------RNTVI  152 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~  152 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++........              ....+
T Consensus       116 qi~~al~~lH~~~ivH~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (310)
T 3s95_A          116 DIASGMAYLHSMNIIHRDLN------------SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV  183 (310)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------TTSEEECTTSCEEECCCTTCEECC--------------------CCCC
T ss_pred             HHHHHHHHHHhCCccCCCCC------------cCeEEECCCCCEEEeecccceecccccccccccccccccccccccccC
Confidence            34678889999999999999            66999999999999999999865432111              11457


Q ss_pred             ccccccccccccCCCCCccceEecC
Q psy3254         153 GTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       153 g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ||+.|+|||++.+..++.++|||||
T Consensus       184 gt~~y~aPE~~~~~~~~~~~Di~sl  208 (310)
T 3s95_A          184 GNPYWMAPEMINGRSYDEKVDVFSF  208 (310)
T ss_dssp             SCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred             CCcceeCHHHhcCCCCCcHHHHHHH
Confidence            9999999999999999999999985

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.49  E-value=1.8e-15  Score=111.83  Aligned_cols=79  Identities=18%  Similarity=0.256  Sum_probs=66.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC-----eEEeeeecccccccccC-------CCcccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH-----AKLADFGVAGQLTDTMA-------KRNTVIGT  154 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~-----~~l~dfg~~~~~~~~~~-------~~~~~~g~  154 (177)
                      ....++.++|..+++|+|++            ++||+++.++.     ++++|||+++.+.....       .....+||
T Consensus       113 qi~~~l~~LH~~~iiHrDlk------------p~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt  180 (330)
T 2izr_A          113 QLISRMEYVHSKNLIYRDVK------------PENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGT  180 (330)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred             HHHHHHHHHHhCCeeccCCC------------HHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCC
Confidence            34678889999999999999            66999998887     99999999987543321       12456899


Q ss_pred             ccccccccccCCCCCccceEecC
Q psy3254         155 PFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       155 ~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      +.|+|||++.+..++.++|||||
T Consensus       181 ~~y~aPE~~~~~~~~~~~Di~sl  203 (330)
T 2izr_A          181 ARYMSINTHLGKEQSRRDDLEAL  203 (330)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             ccccChHHHcCCCCCchhHHHHH
Confidence            99999999999899999999985

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.49  E-value=3.3e-15  Score=112.02  Aligned_cols=77  Identities=31%  Similarity=0.537  Sum_probs=65.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC----CeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG----HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|..+++|++++            |+||+++.++    .++++|||+++.+... ......+||+.|+|||++
T Consensus       124 i~~aL~~LH~~givHrDlk------------p~NIll~~~~~~~~~vkl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~  190 (361)
T 2yab_A          124 ILDGVNYLHTKKIAHFDLK------------PENIMLLDKNIPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIV  190 (361)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEESCTTSSSCCEEECCCSSCEECCTT-CCCCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEEeCCCCCccCEEEEecCCceEcCCC-CccccCCCCccEECchHH
Confidence            4678889999999999999            6699998776    7999999999876543 233456799999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++||||+
T Consensus       191 ~~~~~~~~~Diwsl  204 (361)
T 2yab_A          191 NYEPLGLEADMWSI  204 (361)
T ss_dssp             TTCCCCTHHHHHHH
T ss_pred             cCCCCCccccHHHH
Confidence            98899999999985

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.48  E-value=2.6e-15  Score=112.84  Aligned_cols=79  Identities=28%  Similarity=0.416  Sum_probs=65.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++.+.....  ......||+.|+|||++.
T Consensus       211 qi~~aL~~LH~~~ivHrDlk------------p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  278 (370)
T 2psq_A          211 QLARGMEYLASQKCIHRDLA------------ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF  278 (370)
T ss_dssp             HHHHHHHHHHHTTEECSCCC------------GGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCeeccccc------------hhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhc
Confidence            44678889999999999999            6699999999999999999986543221  223345788999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       279 ~~~~~~~~Dvwsl  291 (370)
T 2psq_A          279 DRVYTHQSDVWSF  291 (370)
T ss_dssp             TCCCCHHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            9899999999985

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.48  E-value=3.9e-15  Score=108.50  Aligned_cols=78  Identities=32%  Similarity=0.620  Sum_probs=64.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.............||+.|+|||++.+..
T Consensus       146 i~~~l~~lH~~~ivH~Dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (298)
T 2zv2_A          146 LIKGIEYLHYQKIIHRDIK------------PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETR  213 (298)
T ss_dssp             HHHHHHHHHHTTEECCCCC------------GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTC
T ss_pred             HHHHHHHHHHCCeeccCCC------------HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCC
Confidence            4678889999999999999            6699999999999999999987654433334567999999999997654


Q ss_pred             ---CCccceEecC
Q psy3254         168 ---YDCVADMWSL  177 (177)
Q Consensus       168 ---~~~~~Diws~  177 (177)
                         ++.++|||||
T Consensus       214 ~~~~~~~~Di~sl  226 (298)
T 2zv2_A          214 KIFSGKALDVWAM  226 (298)
T ss_dssp             CCEESHHHHHHHH
T ss_pred             CCCCCchhhhHhH
Confidence               4678999985

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.48  E-value=4.6e-15  Score=111.22  Aligned_cols=78  Identities=29%  Similarity=0.525  Sum_probs=65.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC---CeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|+|++            |+||+++.++   .++++|||+++..... ......+||+.|+|||++
T Consensus       136 qi~~al~~lH~~~ivH~Dlk------------p~NIll~~~~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~~  202 (362)
T 2bdw_A          136 QILESIAYCHSNGIVHRNLK------------PENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVL  202 (362)
T ss_dssp             HHHHHHHHHHHTTCBCCCCS------------GGGEEESCSSTTCCEEECCCTTCBCCTTC-CSCCCSCSCTTTCCHHHH
T ss_pred             HHHHHHHHHHHCCeEeccCc------------hHHEEEecCCCCCCEEEeecCcceEecCC-cccccCCCCccccCHHHH
Confidence            34678889999999999999            6699997654   5999999999876543 233456899999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++|||||
T Consensus       203 ~~~~~~~~~Diwsl  216 (362)
T 2bdw_A          203 KKDPYSKPVDIWAC  216 (362)
T ss_dssp             TTCCCCTHHHHHHH
T ss_pred             ccCCCCchhhHHHH
Confidence            98899999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.48  E-value=3.1e-15  Score=112.41  Aligned_cols=78  Identities=28%  Similarity=0.432  Sum_probs=57.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++..... ......+||+.|+|||++.+.
T Consensus       135 qi~~al~~lH~~~ivH~Dlk------------p~NIl~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  201 (371)
T 2xrw_A          135 QMLCGIKHLHSAGIIHRDLK------------PSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  201 (371)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTSCEEECCCCC-----------------CTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCeecccCC------------HHHEEEcCCCCEEEEEeecccccccc-cccCCceecCCccCHHHhcCC
Confidence            34678889999999999999            66999999999999999999865432 223446799999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       202 ~~~~~~Diwsl  212 (371)
T 2xrw_A          202 GYKENVDIWSV  212 (371)
T ss_dssp             CCCTTHHHHHH
T ss_pred             CCCchHhHHHH
Confidence            99999999985

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.47  E-value=3.9e-15  Score=114.00  Aligned_cols=76  Identities=34%  Similarity=0.490  Sum_probs=65.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC--eEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH--AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||+++.++.  ++++|||+++....   .....+||+.|+|||++.
T Consensus       208 qi~~aL~~LH~~~ivHrDlK------------p~NILl~~~~~~~vkL~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~  272 (429)
T 3kvw_A          208 SILQCLDALHKNRIIHCDLK------------PENILLKQQGRSGIKVIDFGSSCYEHQ---RVYTYIQSRFYRAPEVIL  272 (429)
T ss_dssp             HHHHHHHHHHHHTEECSCCS------------GGGEEESSTTSCCEEECCCTTCEETTC---CCCSSCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHeEEccCCCcceEEeecccceecCC---cccccCCCCCccChHHHh
Confidence            34678889999999999999            66999999887  99999999976433   233568999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       273 ~~~~~~~~DiwSl  285 (429)
T 3kvw_A          273 GARYGMPIDMWSL  285 (429)
T ss_dssp             TBCCCTHHHHHHH
T ss_pred             CCCCCchHHHHhH
Confidence            9899999999995

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.47  E-value=3.4e-15  Score=113.12  Aligned_cols=78  Identities=29%  Similarity=0.443  Sum_probs=65.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC-CCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|+|++            |+||+++ .++.++++|||+++..... ......+||+.|+|||++.+
T Consensus       149 qi~~aL~~LH~~~ivHrDlk------------p~Nill~~~~~~~kL~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~  215 (394)
T 4e7w_A          149 QLLRSLAYIHSIGICHRDIK------------PQNLLLDPPSGVLKLIDFGSAKILIAG-EPNVSYICSRYYRAPELIFG  215 (394)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEEETTTTEEEECCCTTCEECCTT-CCCCSSCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHCCccCCCCC------------HHHEEEcCCCCcEEEeeCCCcccccCC-CCCcccccCcCccCHHHHcC
Confidence            34678889999999999999            6699998 7899999999999876443 23345678999999999976


Q ss_pred             C-CCCccceEecC
Q psy3254         166 I-GYDCVADMWSL  177 (177)
Q Consensus       166 ~-~~~~~~Diws~  177 (177)
                      . .|+.++||||+
T Consensus       216 ~~~~~~~~DiwSl  228 (394)
T 4e7w_A          216 ATNYTTNIDIWST  228 (394)
T ss_dssp             CSSCCTHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            4 59999999985

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.47  E-value=3.3e-15  Score=110.31  Aligned_cols=79  Identities=25%  Similarity=0.440  Sum_probs=60.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||+.|+|||++.+ 
T Consensus       108 qi~~aL~~LH~~~ivH~Dik------------p~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  175 (324)
T 3mtl_A          108 QLLRGLAYCHRQKVLHRDLK------------PQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS  175 (324)
T ss_dssp             HHHHHHHHHHHTTEEESSCC------------GGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCccCCCcC------------HHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCC
Confidence            34678889999999999999            66999999999999999999866544334445678999999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       176 ~~~~~~~Diwsl  187 (324)
T 3mtl_A          176 TDYSTQIDMWGV  187 (324)
T ss_dssp             CCCCTHHHHHHH
T ss_pred             CCCCcHHHHHHH
Confidence            568999999985

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.47  E-value=3.7e-15  Score=113.82  Aligned_cols=78  Identities=31%  Similarity=0.477  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-CCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|+|++            ++||+++.+ +.+||+|||+++.+... ......+||+.|+|||++.+
T Consensus       164 qi~~aL~~LH~~~ivHrDlk------------p~NILl~~~~~~~kl~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~  230 (420)
T 1j1b_A          164 QLFRSLAYIHSFGICHRDIK------------PQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIFG  230 (420)
T ss_dssp             HHHHHHHHHHTTTEECSCCS------------GGGEEEETTTTEEEECCCTTCEECCTT-CCCCSCCSCTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHCCccccCCC------------hhhEEEeCCCCeEEeccchhhhhcccC-CCceeeeeCCCcCCHHHHcC
Confidence            44678889999999999999            669999865 56899999999876443 22344679999999999976


Q ss_pred             C-CCCccceEecC
Q psy3254         166 I-GYDCVADMWSL  177 (177)
Q Consensus       166 ~-~~~~~~Diws~  177 (177)
                      . .|+.++|||||
T Consensus       231 ~~~~~~~~DiwSl  243 (420)
T 1j1b_A          231 ATDYTSSIDVWSA  243 (420)
T ss_dssp             CSSCCTHHHHHHH
T ss_pred             CCCCCchhhhHHH
Confidence            4 79999999985

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.47  E-value=5.1e-15  Score=111.17  Aligned_cols=76  Identities=28%  Similarity=0.469  Sum_probs=65.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.....   ....+||++|+|||++.+ 
T Consensus       136 qi~~~L~~LH~~~ivH~Dlk------------p~NIll~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~  200 (367)
T 1cm8_A          136 QMLKGLRYIHAAGIIHRDLK------------PGNLAVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNW  200 (367)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEECCSS---CCSSCSCGGGCCTHHHHTT
T ss_pred             HHHHHHHHHHHCCccccCcC------------HHHEEEcCCCCEEEEeeecccccccc---cCcCcCCCCcCCHHHHhCC
Confidence            34678889999999999999            66999999999999999999875432   334679999999999987 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++||||+
T Consensus       201 ~~~~~~~Diwsl  212 (367)
T 1cm8_A          201 MRYTQTVDIWSV  212 (367)
T ss_dssp             TCCCTTHHHHHH
T ss_pred             CCCChhhhHHHH
Confidence            679999999985

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.47  E-value=3.7e-15  Score=108.57  Aligned_cols=78  Identities=28%  Similarity=0.441  Sum_probs=60.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++...... ......+||+.|+|||++.+.
T Consensus       120 i~~~l~~lH~~~i~H~Dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  187 (294)
T 4eqm_A          120 ILDGIKHAHDMRIVHRDIK------------PQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE  187 (294)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------GGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTC
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCC
Confidence            3678889999999999999            669999999999999999998664332 223346799999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       188 ~~~~~~Di~sl  198 (294)
T 4eqm_A          188 ATDECTDIYSI  198 (294)
T ss_dssp             CCCTTHHHHHH
T ss_pred             CCCchHhHHHH
Confidence            89999999985

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.47  E-value=2.4e-15  Score=111.11  Aligned_cols=79  Identities=28%  Similarity=0.378  Sum_probs=48.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC---CeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            ++||+++.++   .++++|||+++............+||+.|+|||++
T Consensus       114 qi~~~l~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~  181 (325)
T 3kn6_A          114 KLVSAVSHMHDVGVVHRDLK------------PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL  181 (325)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEEEC----CEEEECCCTTCEECCC--------------------
T ss_pred             HHHHHHHHHHHCCCeecCCC------------HHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHh
Confidence            34678889999999999999            6699997665   79999999998765444444566789999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++|||||
T Consensus       182 ~~~~~~~~~Diwsl  195 (325)
T 3kn6_A          182 NQNGYDESCDLWSL  195 (325)
T ss_dssp             --CCCCHHHHHHHH
T ss_pred             cCCCCCCccchHHH
Confidence            98899999999985

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.46  E-value=2.4e-15  Score=114.56  Aligned_cols=75  Identities=21%  Similarity=0.234  Sum_probs=63.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccc---
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~---  163 (177)
                      ....++.++|..+++|+|+|            ++||+++.++.+|++|||+++.....   ....+| +.|+|||++   
T Consensus       219 qi~~aL~~LH~~~iiHrDiK------------p~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~  282 (413)
T 3dzo_A          219 QVIRLLASLHHYGLVHTYLR------------PVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAER  282 (413)
T ss_dssp             HHHHHHHHHHHTTEECSCCC------------GGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCcccCCcc------------cceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhcc
Confidence            34678889999999999999            66999999999999999999865433   344578 999999999   


Q ss_pred             -------cCCCCCccceEecC
Q psy3254         164 -------QEIGYDCVADMWSL  177 (177)
Q Consensus       164 -------~~~~~~~~~Diws~  177 (177)
                             ....|+.++|||||
T Consensus       283 ~~~~~~~~~~~~~~~~DvwSl  303 (413)
T 3dzo_A          283 MLPFGQHHPTLMTFAFDTWTL  303 (413)
T ss_dssp             TSTTGGGCCEEECHHHHHHHH
T ss_pred             ccccccccCcCCCchhhHHHH
Confidence                   55568889999995

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.46  E-value=7e-15  Score=109.85  Aligned_cols=76  Identities=37%  Similarity=0.558  Sum_probs=64.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-------------------------CCCeEEeeeeccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-------------------------EGHAKLADFGVAGQL  141 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-------------------------~~~~~l~dfg~~~~~  141 (177)
                      ....++.++|..+++|+|++            ++||+++.                         ++.++++|||+++..
T Consensus       145 qi~~aL~~LH~~~ivHrDlk------------p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~  212 (360)
T 3llt_A          145 EILKALNYLRKMSLTHTDLK------------PENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFK  212 (360)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEET
T ss_pred             HHHHHHHHHHHCCeeeCCCC------------cccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceec
Confidence            34688889999999999999            66999975                         788999999999864


Q ss_pred             ccccCCCccccccccccccccccCCCCCccceEecC
Q psy3254         142 TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       142 ~~~~~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ...   ....+||+.|+|||++.+..|+.++|||||
T Consensus       213 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  245 (360)
T 3llt_A          213 SDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSF  245 (360)
T ss_dssp             TSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred             CCC---CcCccCcccccCcHHHcCCCCCCccchHHH
Confidence            432   335679999999999999899999999985

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.46  E-value=5.8e-15  Score=107.35  Aligned_cols=79  Identities=16%  Similarity=0.184  Sum_probs=65.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC-----eEEeeeecccccccccC-------CCcccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH-----AKLADFGVAGQLTDTMA-------KRNTVIGT  154 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~-----~~l~dfg~~~~~~~~~~-------~~~~~~g~  154 (177)
                      ....++.++|..+++|++++            |+||+++.++.     ++++|||+++.......       ......||
T Consensus       114 qi~~~l~~lH~~~ivH~Dlk------------p~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt  181 (298)
T 1csn_A          114 QMLARVQSIHEKSLVYRDIK------------PDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT  181 (298)
T ss_dssp             HHHHHHHHHHTTTEECCCCC------------GGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSC
T ss_pred             HHHHHHHHHHhCCEecCCCC------------HHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCC
Confidence            34678889999999999999            66999987765     99999999987644321       12446799


Q ss_pred             ccccccccccCCCCCccceEecC
Q psy3254         155 PFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       155 ~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      +.|+|||++.+..++.++|||||
T Consensus       182 ~~y~aPE~~~~~~~~~~~Di~sl  204 (298)
T 1csn_A          182 ARYMSINTHLGREQSRRDDLEAL  204 (298)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             cccCCchhhcCCCCChHHHHHHH
Confidence            99999999998889999999985

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.46  E-value=5e-15  Score=109.90  Aligned_cols=78  Identities=32%  Similarity=0.402  Sum_probs=65.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|+|++            |+||+++.++.++++|||+++..... ......+||+.|+|||++.+.
T Consensus       138 qi~~~L~~LH~~~ivH~Dlk------------p~NIll~~~~~~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  204 (335)
T 3dls_A          138 QLVSAVGYLRLKDIIHRDIK------------DENIVIAEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEVLMGN  204 (335)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEECTTSCEEECCCTTCEECCTT-CCBCEECSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHhCCeEEeccC------------HHHEEEcCCCcEEEeecccceECCCC-CceeccCCCccccChhhhcCC
Confidence            34678889999999999999            66999999999999999999876543 233456799999999999887


Q ss_pred             CC-CccceEecC
Q psy3254         167 GY-DCVADMWSL  177 (177)
Q Consensus       167 ~~-~~~~Diws~  177 (177)
                      .+ +.++|||||
T Consensus       205 ~~~~~~~Diwsl  216 (335)
T 3dls_A          205 PYRGPELEMWSL  216 (335)
T ss_dssp             CBCSHHHHHHHH
T ss_pred             CCCCCcccchhH
Confidence            76 788999985

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.45  E-value=4.3e-15  Score=109.69  Aligned_cols=79  Identities=29%  Similarity=0.373  Sum_probs=64.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++.+.....  ......||..|+|||++.
T Consensus       123 qi~~~l~~lH~~~ivH~Dik------------p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (325)
T 3kex_A          123 QIAKGMYYLEEHGMVHRNLA------------ARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH  190 (325)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------STTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCccc------------hheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhc
Confidence            34678889999999999999            6699999999999999999987643322  223456788999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       191 ~~~~~~~~Di~sl  203 (325)
T 3kex_A          191 FGKYTHQSDVWSY  203 (325)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCCChhhHhHHh
Confidence            8889999999985

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.45  E-value=6.3e-15  Score=107.02  Aligned_cols=79  Identities=19%  Similarity=0.276  Sum_probs=66.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe---CCCCCeEEeeeecccccccccC-------CCcccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL---NTEGHAKLADFGVAGQLTDTMA-------KRNTVIGTPF  156 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~---~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~  156 (177)
                      ....++.++|..+++|++++            ++||++   +.++.++++|||+++.......       ......||+.
T Consensus       113 qi~~~l~~LH~~~ivH~Dlk------------p~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~  180 (296)
T 4hgt_A          113 QMISRIEYIHSKNFIHRDVK------------PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR  180 (296)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGG
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCcc
Confidence            34678889999999999999            669999   7888999999999987643321       2234679999


Q ss_pred             ccccccccCCCCCccceEecC
Q psy3254         157 WMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       157 y~aPe~~~~~~~~~~~Diws~  177 (177)
                      |+|||++.+..++.++|||||
T Consensus       181 y~aPE~~~~~~~~~~~Di~sl  201 (296)
T 4hgt_A          181 YASINTHLGIEQSRRDDLESL  201 (296)
T ss_dssp             GCCHHHHTTCCCCHHHHHHHH
T ss_pred             ccchHHhcCCCCCchhHHHHH
Confidence            999999999899999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.45  E-value=8e-15  Score=108.35  Aligned_cols=78  Identities=27%  Similarity=0.410  Sum_probs=65.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC----CeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG----HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|++++            |+||+++.++    .++++|||+++..... ......+||+.|+|||+
T Consensus       122 qi~~al~~lH~~~ivH~Dlk------------p~NIll~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~  188 (326)
T 2y0a_A          122 QILNGVYYLHSLQIAHFDLK------------PENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEI  188 (326)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESCSSSSSCCEEECCCTTCEECCTT-SCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHHCCeEcCCCC------------HHHEEEecCCCCCCCEEEEECCCCeECCCC-CccccccCCcCcCCcee
Confidence            34678889999999999999            6699998877    7999999999876433 22344679999999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..++.++|||||
T Consensus       189 ~~~~~~~~~~Diwsl  203 (326)
T 2y0a_A          189 VNYEPLGLEADMWSI  203 (326)
T ss_dssp             HTTCCCCTHHHHHHH
T ss_pred             ecCCCCCcHHHHHHH
Confidence            998899999999985

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.45  E-value=9.4e-15  Score=108.84  Aligned_cols=78  Identities=24%  Similarity=0.432  Sum_probs=64.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc----cCCCccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT----MAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.+...    .......+||+.|+|||++
T Consensus       133 i~~~l~~LH~~~ivH~Dlk------------p~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  200 (351)
T 3mi9_A          133 LLNGLYYIHRNKILHRDMK------------AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELL  200 (351)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHCCeeCCCCC------------HHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhh
Confidence            4678889999999999999            66999999999999999999865422    1123446789999999999


Q ss_pred             cC-CCCCccceEecC
Q psy3254         164 QE-IGYDCVADMWSL  177 (177)
Q Consensus       164 ~~-~~~~~~~Diws~  177 (177)
                      .+ ..|+.++|||||
T Consensus       201 ~~~~~~~~~~Diwsl  215 (351)
T 3mi9_A          201 LGERDYGPPIDLWGA  215 (351)
T ss_dssp             TTCCSCCTHHHHHHH
T ss_pred             cCCCCCCcHhHHHHH
Confidence            76 568999999985

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.45  E-value=6.3e-15  Score=110.68  Aligned_cols=76  Identities=28%  Similarity=0.519  Sum_probs=55.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.....   ....+||++|+|||++.+ 
T Consensus       140 qi~~aL~~LH~~givH~Dlk------------p~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~  204 (367)
T 2fst_X          140 QILRGLKYIHSADIIHRDLK------------PSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRAPEIMLNW  204 (367)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTCCEEECC------------------CCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCeeeCCCC------------HhhEEECCCCCEEEeecccccccccc---CCCcCcCcCccChHHHcCC
Confidence            34678889999999999999            66999999999999999999865432   334679999999999987 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++||||+
T Consensus       205 ~~~~~~~Diwsl  216 (367)
T 2fst_X          205 MHYNQTVDIWSV  216 (367)
T ss_dssp             CSCCTTHHHHHH
T ss_pred             cCCCchhhHHHH
Confidence            679999999985

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.44  E-value=2.9e-15  Score=112.81  Aligned_cols=75  Identities=19%  Similarity=0.181  Sum_probs=64.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|+|++            |+||+++.++.++++|||+++....   .....+| +.|+|||++.+.
T Consensus       214 qi~~aL~~LH~~~ivHrDik------------p~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~  277 (377)
T 3byv_A          214 QVIRLLASLHHYGLVHTYLR------------PVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARR  277 (377)
T ss_dssp             HHHHHHHHHHHTTEECSCCC------------GGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhccc
Confidence            44678889999999999999            6699999999999999999986433   2334567 999999999877


Q ss_pred             -----------CCCccceEecC
Q psy3254         167 -----------GYDCVADMWSL  177 (177)
Q Consensus       167 -----------~~~~~~Diws~  177 (177)
                                 .|+.++|||||
T Consensus       278 ~~~~~~~~~~~~~~~~~DvwSl  299 (377)
T 3byv_A          278 ATISYHRDRRTLMTFSFDAWAL  299 (377)
T ss_dssp             TSTHHHHCCEEECCHHHHHHHH
T ss_pred             ccccccccccccCChhhhHHHH
Confidence                       89999999995

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.44  E-value=6.9e-15  Score=109.43  Aligned_cols=78  Identities=18%  Similarity=0.253  Sum_probs=65.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC--CeEEeeeecccccccccC-------CCcccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG--HAKLADFGVAGQLTDTMA-------KRNTVIGTPFWM  158 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~--~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~y~  158 (177)
                      ...++.++|..+++|++++            ++||+++.++  .++++|||+++.+.....       ......||+.|+
T Consensus       160 i~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~  227 (345)
T 2v62_A          160 MLDVLEYIHENEYVHGDIK------------AANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFT  227 (345)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTC
T ss_pred             HHHHHHHHHhCCeeCCCcC------------HHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCcccc
Confidence            4678889999999999999            6699998777  999999999987643211       113457999999


Q ss_pred             ccccccCCCCCccceEecC
Q psy3254         159 APEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~~~~~~~~~Diws~  177 (177)
                      |||++.+..++.++|||||
T Consensus       228 aPE~~~~~~~~~~~Di~sl  246 (345)
T 2v62_A          228 SLDAHKGVALSRRSDVEIL  246 (345)
T ss_dssp             CHHHHHTCCCCHHHHHHHH
T ss_pred             CHHHhcCCCCCchhhHHHH
Confidence            9999999889999999995

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.44  E-value=2.4e-15  Score=109.50  Aligned_cols=79  Identities=29%  Similarity=0.435  Sum_probs=63.4

Q ss_pred             chHHHHhhhc--------hhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccc
Q psy3254          87 CDFEFLKFLS--------YDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGT  154 (177)
Q Consensus        87 ~~~~~l~~l~--------~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~  154 (177)
                      ....++.++|        ..+++|+|++            |+||+++.++.++++|||+++.......    .....+||
T Consensus       113 ~i~~~l~~lH~~~~~~~~~~~ivH~Dlk------------p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt  180 (301)
T 3q4u_A          113 SIASGLAHLHIEIFGTQGKPAIAHRDLK------------SKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT  180 (301)
T ss_dssp             HHHHHHHHHHSCBCSTTCBCEEECSCCC------------GGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCC
T ss_pred             HHHHHHHHHHHhhhhccCCCCeecCCCC------------hHhEEEcCCCCEEEeeCCCeeecccccccccccccccccc
Confidence            3467888999        8999999999            6699999999999999999976543221    12335799


Q ss_pred             ccccccccccCC------CCCccceEecC
Q psy3254         155 PFWMAPEVIQEI------GYDCVADMWSL  177 (177)
Q Consensus       155 ~~y~aPe~~~~~------~~~~~~Diws~  177 (177)
                      +.|+|||++.+.      .++.++|||||
T Consensus       181 ~~y~aPE~~~~~~~~~~~~~~~~~Dvwsl  209 (301)
T 3q4u_A          181 KRYMAPEVLDETIQVDCFDSYKRVDIWAF  209 (301)
T ss_dssp             GGGCCHHHHTTCCCTTCHHHHHHHHHHHH
T ss_pred             cceeChhhhcCcCCCCcccCCchhhHHHH
Confidence            999999999876      45578999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.44  E-value=5.8e-15  Score=112.11  Aligned_cols=79  Identities=27%  Similarity=0.450  Sum_probs=59.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe----CCCCCeEEeeeeccccccccc---CCCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL----NTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~----~~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~a  159 (177)
                      ....++.++|..+++|+|++            ++||++    +.++.++|+|||+++......   ......+||+.|+|
T Consensus       136 qi~~al~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~a  203 (405)
T 3rgf_A          136 QILDGIHYLHANWVLHRDLK------------PANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  203 (405)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCC
T ss_pred             HHHHHHHHHHhCCEeCCCcC------------HHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccC
Confidence            44788889999999999999            669999    677899999999998764321   22344689999999


Q ss_pred             cccccC-CCCCccceEecC
Q psy3254         160 PEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~-~~~~~~~Diws~  177 (177)
                      ||++.+ ..|+.++|||||
T Consensus       204 PE~~~~~~~~~~~~DiwSl  222 (405)
T 3rgf_A          204 PELLLGARHYTKAIDIWAI  222 (405)
T ss_dssp             HHHHTTCCSCCHHHHHHHH
T ss_pred             chhhcCCCcccchhhhHHH
Confidence            999987 458999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.44  E-value=4.5e-15  Score=109.54  Aligned_cols=78  Identities=32%  Similarity=0.422  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC--CCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT--EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            |+||+++.  ++.++++|||+++.+... .......||+.|+|||++.
T Consensus       110 qi~~al~~lH~~givH~Dlk------------p~NIl~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~  176 (321)
T 1tki_A          110 QVCEALQFLHSHNIGHFDIR------------PENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQ  176 (321)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESSSSCCCEEECCCTTCEECCTT-CEEEEEESCGGGSCHHHHT
T ss_pred             HHHHHHHHHHHCCCCcCCCC------------HHHEEEccCCCCCEEEEECCCCeECCCC-CccccccCChhhcCcHHhc
Confidence            34678889999999999999            66999987  789999999999876543 2234467999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++||||+
T Consensus       177 ~~~~~~~~Diwsl  189 (321)
T 1tki_A          177 HDVVSTATDMWSL  189 (321)
T ss_dssp             TCEECHHHHHHHH
T ss_pred             CCCCCchhhHHHH
Confidence            8889999999985

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.44  E-value=7.3e-15  Score=107.57  Aligned_cols=79  Identities=25%  Similarity=0.441  Sum_probs=59.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++............+||..|+|||++.+ 
T Consensus       110 ~l~~~l~~lH~~~ivH~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  177 (311)
T 4agu_A          110 QTLQAVNFCHKHNCIHRDVK------------PENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD  177 (311)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTC
T ss_pred             HHHHHHHHHHHCCCcCCCCC------------hhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcC
Confidence            34678889999999999999            66999999999999999999876544334445679999999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       178 ~~~~~~~Di~sl  189 (311)
T 4agu_A          178 TQYGPPVDVWAI  189 (311)
T ss_dssp             SCCCTHHHHHHH
T ss_pred             CCCCcchhhHHH
Confidence            678999999985

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.44  E-value=2.9e-15  Score=110.70  Aligned_cols=79  Identities=30%  Similarity=0.376  Sum_probs=64.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--Ccccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++........  .....||..|+|||++.
T Consensus       125 qi~~~l~~LH~~~ivH~Dik------------p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  192 (327)
T 3poz_A          125 QIAKGMNYLEDRRLVHRDLA------------ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHH
T ss_pred             HHHHHHHHHhhCCeeCCCCC------------hheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhc
Confidence            34678889999999999999            66999999999999999999876433221  22345688999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       193 ~~~~~~~~Di~sl  205 (327)
T 3poz_A          193 HRIYTHQSDVWSY  205 (327)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCCCchhhhhhh
Confidence            9899999999985

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.44  E-value=1e-14  Score=105.99  Aligned_cols=79  Identities=19%  Similarity=0.276  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe---CCCCCeEEeeeecccccccccC-------CCcccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL---NTEGHAKLADFGVAGQLTDTMA-------KRNTVIGTPF  156 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~---~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~  156 (177)
                      ....++.++|..+++|++++            ++||++   +.++.++++|||+++.......       ......||+.
T Consensus       113 qi~~~l~~lH~~~ivH~dlk------------p~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~  180 (296)
T 3uzp_A          113 QMISRIEYIHSKNFIHRDVK------------PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR  180 (296)
T ss_dssp             HHHHHHHHHHHTTEECSCCC------------GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTT
T ss_pred             HHHHHHHHHHhCCeeeCCCC------------HHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccc
Confidence            34678889999999999999            669999   4788999999999987644322       1244679999


Q ss_pred             ccccccccCCCCCccceEecC
Q psy3254         157 WMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       157 y~aPe~~~~~~~~~~~Diws~  177 (177)
                      |+|||++.+..++.++|||||
T Consensus       181 y~aPE~~~~~~~~~~~Di~sl  201 (296)
T 3uzp_A          181 YASINTHLGIEQSRRDDLESL  201 (296)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHH
T ss_pred             cCChhhhcCCCCCcchhhHHH
Confidence            999999999889999999985

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.43  E-value=4.8e-15  Score=110.57  Aligned_cols=79  Identities=30%  Similarity=0.460  Sum_probs=65.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            +.||+++.++.++++|||+++.+.....  ......||+.|+|||++.
T Consensus       201 ql~~aL~~LH~~~ivH~Dik------------p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  268 (359)
T 3vhe_A          201 QVAKGMEFLASRKCIHRDLA------------ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  268 (359)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHCCcccCCCC------------hhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhc
Confidence            44788899999999999999            6699999999999999999986543211  233456899999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       269 ~~~~~~~~Di~sl  281 (359)
T 3vhe_A          269 DRVYTIQSDVWSF  281 (359)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCCchhhhhhH
Confidence            8889999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.43  E-value=6.7e-15  Score=107.98  Aligned_cols=78  Identities=28%  Similarity=0.489  Sum_probs=58.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---CCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.+....   ......+||+.|+|||++.
T Consensus       125 i~~~l~~lH~~~ivH~dlk------------p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  192 (311)
T 3ork_A          125 ACQALNFSHQNGIIHRDVK------------PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR  192 (311)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------GGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHH
T ss_pred             HHHHHHHHHHCCCCcCCCC------------HHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhc
Confidence            3677889999999999999            669999999999999999998654321   1223457999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       193 ~~~~~~~~Di~sl  205 (311)
T 3ork_A          193 GDSVDARSDVYSL  205 (311)
T ss_dssp             TCCCCHHHHHHHH
T ss_pred             CCCCCchHhHHHH
Confidence            9899999999985

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.43  E-value=1.1e-14  Score=112.70  Aligned_cols=78  Identities=31%  Similarity=0.444  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++..... ....+.+||+.|+|||++.+.
T Consensus       124 qi~~aL~~LH~~givHrDLk------------p~NIll~~~~~vkL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~  190 (476)
T 2y94_A          124 QILSGVDYCHRHMVVHRDLK------------PENVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGR  190 (476)
T ss_dssp             HHHHHHHHHHTTTEECSCCS------------GGGEEECTTCCEEECCCSSCEECCTT-CCBCCCCSCSTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCCCccccc------------HHHEEEecCCCeEEEeccchhhcccc-ccccccCCCcCeEChhhccCC
Confidence            34678889999999999999            66999999999999999999876543 233456899999999999887


Q ss_pred             CC-CccceEecC
Q psy3254         167 GY-DCVADMWSL  177 (177)
Q Consensus       167 ~~-~~~~Diws~  177 (177)
                      .+ +.++||||+
T Consensus       191 ~~~~~~~DiwSl  202 (476)
T 2y94_A          191 LYAGPEVDIWSS  202 (476)
T ss_dssp             CBCSHHHHHHHH
T ss_pred             CCCCCcceehhh
Confidence            65 678999985

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.43  E-value=1.3e-14  Score=107.59  Aligned_cols=78  Identities=28%  Similarity=0.493  Sum_probs=66.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.............||..|+|||++.+..
T Consensus       150 i~~aL~~LH~~~ivH~dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  217 (335)
T 2owb_A          150 IVLGCQYLHRNRVIHRDLK------------LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG  217 (335)
T ss_dssp             HHHHHHHHHHTTEECSCCC------------GGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSC
T ss_pred             HHHHHHHHHHCCCEecCCC------------chhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCC
Confidence            3677889999999999999            6699999999999999999987654333444567999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       218 ~~~~~Di~sl  227 (335)
T 2owb_A          218 HSFEVDVWSI  227 (335)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCchhhHHHH
Confidence            9999999985

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.43  E-value=1.1e-14  Score=108.69  Aligned_cols=77  Identities=32%  Similarity=0.547  Sum_probs=55.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|+|++            ++||+++.   ++.++++|||+++..... ......+||+.|+|||++.
T Consensus       157 i~~~L~~LH~~~ivH~Dik------------p~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~  223 (349)
T 2w4o_A          157 ILEAVAYLHENGIVHRDLK------------PENLLYATPAPDAPLKIADFGLSKIVEHQ-VLMKTVCGTPGYCAPEILR  223 (349)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------GGGEEESSSSTTCCEEECCCC-----------------CGGGSCHHHHT
T ss_pred             HHHHHHHHHHCCeEecCCC------------cccEEEecCCCCCCEEEccCccccccCcc-cccccccCCCCccCHHHhc
Confidence            3677889999999999999            66999975   789999999999865432 2234567999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       224 ~~~~~~~~Diwsl  236 (349)
T 2w4o_A          224 GCAYGPEVDMWSV  236 (349)
T ss_dssp             TCCCCTHHHHHHH
T ss_pred             CCCCCcccchHHH
Confidence            9899999999985

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.43  E-value=1.4e-14  Score=109.27  Aligned_cols=79  Identities=28%  Similarity=0.418  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++......  .......||+.|+|||++.
T Consensus       199 qi~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  266 (382)
T 3tt0_A          199 QVARGMEYLASKKCIHRDLA------------ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  266 (382)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH
T ss_pred             HHHHHHHHHHhCCEecCCCC------------cceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhc
Confidence            34678889999999999999            669999999999999999998664322  1223356788999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       267 ~~~~~~~~Diwsl  279 (382)
T 3tt0_A          267 DRIYTHQSDVWSF  279 (382)
T ss_dssp             SCCCCHHHHHHHH
T ss_pred             CCCCCchhHHHHH
Confidence            9899999999985

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.43  E-value=9e-15  Score=110.67  Aligned_cols=78  Identities=27%  Similarity=0.474  Sum_probs=60.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            |+||+++ ++.++++|||+++.+.....  .....+||+.|+|||++.
T Consensus       163 qi~~aL~~lH~~~ivHrDlk------------p~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  229 (390)
T 2zmd_A          163 NMLEAVHTIHQHGIVHSDLK------------PANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK  229 (390)
T ss_dssp             HHHHHHHHHHTTTCCCCCCC------------GGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHCCeeecCCC------------HHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhh
Confidence            34678889999999999999            6699995 58899999999987643321  234567999999999986


Q ss_pred             C-----------CCCCccceEecC
Q psy3254         165 E-----------IGYDCVADMWSL  177 (177)
Q Consensus       165 ~-----------~~~~~~~Diws~  177 (177)
                      +           ..|+.++|||||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~DiwSl  253 (390)
T 2zmd_A          230 DMSSSRENGKSKSKISPKSDVWSL  253 (390)
T ss_dssp             CC------------CCHHHHHHHH
T ss_pred             hccccccccccccCCCChhhHHHH
Confidence            5           368899999985

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.43  E-value=1.2e-14  Score=107.54  Aligned_cols=79  Identities=27%  Similarity=0.435  Sum_probs=60.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.+...........||..|+|||++.+.
T Consensus       132 qi~~~l~~LH~~~ivH~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  199 (331)
T 4aaa_A          132 QIINGIGFCHSHNIIHRDIK------------PENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD  199 (331)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCEEccCcC------------hheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCC
Confidence            34678889999999999999            669999999999999999998765443344456799999999999875


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++|||||
T Consensus       200 ~~~~~~~Di~sl  211 (331)
T 4aaa_A          200 VKYGKAVDVWAI  211 (331)
T ss_dssp             TTCCTHHHHHHH
T ss_pred             CCcchHHHHHHH
Confidence             78999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.42  E-value=1.1e-14  Score=104.99  Aligned_cols=79  Identities=32%  Similarity=0.467  Sum_probs=45.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||++..............||+.|+|||++.+.
T Consensus       120 qi~~~l~~lH~~~i~H~dl~------------p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  187 (278)
T 3cok_A          120 QIITGMLYLHSHGILHRDLT------------LSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS  187 (278)
T ss_dssp             HHHHHHHHHHHTTEECSSCC------------GGGEEECTTCCEEECCCTTCEECC------------------------
T ss_pred             HHHHHHHHHHHCCeecCCCC------------HHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCC
Confidence            34678889999999999999            669999999999999999998765433333456799999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       188 ~~~~~~Di~sl  198 (278)
T 3cok_A          188 AHGLESDVWSL  198 (278)
T ss_dssp             ----CTHHHHH
T ss_pred             CCCchhhHHHH
Confidence            89999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.42  E-value=1.3e-14  Score=108.46  Aligned_cols=78  Identities=31%  Similarity=0.474  Sum_probs=63.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc-cCCCccccccccccccccccC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++++|||+++..... .......+||+.|+|||++.+ 
T Consensus       168 i~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  235 (355)
T 1vzo_A          168 IVLALEHLHKLGIIYRDIK------------LENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG  235 (355)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------GGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCC
Confidence            4678889999999999999            66999999999999999999865432 222344679999999999985 


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..++.++|||||
T Consensus       236 ~~~~~~~~Dvwsl  248 (355)
T 1vzo_A          236 DSGHDKAVDWWSL  248 (355)
T ss_dssp             C---CTHHHHHHH
T ss_pred             CCCCCchhhHHHH
Confidence             357889999985

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.42  E-value=3.7e-15  Score=110.91  Aligned_cols=78  Identities=33%  Similarity=0.486  Sum_probs=64.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC----CCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE----GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|..+++|+|++            ++||++...    +.++++|||+++..........+.+||+.|+|||++
T Consensus       125 i~~al~~lH~~givHrDlk------------p~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~  192 (342)
T 2qr7_A          125 ITKTVEYLHAQGVVHRDLK------------PSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL  192 (342)
T ss_dssp             HHHHHHHHHHTTEECSCCC------------GGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHH
T ss_pred             HHHHHHHHHHCCcEeccCC------------HHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHh
Confidence            4678889999999999999            669997433    249999999998765544444567899999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++|||||
T Consensus       193 ~~~~~~~~~Diwsl  206 (342)
T 2qr7_A          193 ERQGYDAACDIWSL  206 (342)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             cCCCCCCccCeeeH
Confidence            88789999999985

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.42  E-value=1.3e-14  Score=109.14  Aligned_cols=78  Identities=28%  Similarity=0.359  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe--CCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL--NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~--~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||++  +.++.++++|||+++.+... ......+||+.|+|||++.
T Consensus       195 qi~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~  261 (373)
T 2x4f_A          195 QICEGIRHMHQMYILHLDLK------------PENILCVNRDAKQIKIIDFGLARRYKPR-EKLKVNFGTPEFLAPEVVN  261 (373)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEEEETTTTEEEECCCSSCEECCTT-CBCCCCCSSCTTCCHHHHT
T ss_pred             HHHHHHHHHHHCCcccccCC------------HHHEEEecCCCCcEEEEeCCCceecCCc-cccccccCCCcEeChhhcc
Confidence            34677889999999999999            669998  56678999999999876543 2233457999999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       262 ~~~~~~~~Diwsl  274 (373)
T 2x4f_A          262 YDFVSFPTDMWSV  274 (373)
T ss_dssp             TCBCCHHHHHHHH
T ss_pred             CCCCCcHHhHHHH
Confidence            8889999999985

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.42  E-value=3.8e-15  Score=110.19  Aligned_cols=79  Identities=30%  Similarity=0.456  Sum_probs=63.0

Q ss_pred             chHHHHhhhchh---------hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--------CCCc
Q psy3254          87 CDFEFLKFLSYD---------DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--------AKRN  149 (177)
Q Consensus        87 ~~~~~l~~l~~~---------~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--------~~~~  149 (177)
                      ....++.++|..         +++|+|++            ++||+++.++.++++|||+++.+....        ....
T Consensus       119 qi~~~L~~LH~~~~~~~~~~~~ivH~Dik------------p~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~  186 (336)
T 3g2f_A          119 SVTRGLAYLHTELPRGDHYKPAISHRDLN------------SRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI  186 (336)
T ss_dssp             HHHHHHHHHHCCBCCGGGCBCCEECSSCS------------GGGEEECTTSCEEECCCTTCEECSSSSCC---------C
T ss_pred             HHHHHHHHHHhhhccccccccceeecccc------------cceEEEcCCCcEEEeeccceeecccccccCccccccccc
Confidence            346788899998         99999999            669999999999999999998654321        1122


Q ss_pred             cccccccccccccccC-------CCCCccceEecC
Q psy3254         150 TVIGTPFWMAPEVIQE-------IGYDCVADMWSL  177 (177)
Q Consensus       150 ~~~g~~~y~aPe~~~~-------~~~~~~~Diws~  177 (177)
                      ..+||+.|+|||++.+       ..++.++|||||
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl  221 (336)
T 3g2f_A          187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYAL  221 (336)
T ss_dssp             CTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHH
T ss_pred             cCCCccceeCchhhcCCcccccccccccccchHHH
Confidence            4579999999999976       456678999985

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.42  E-value=1.8e-14  Score=105.22  Aligned_cols=78  Identities=56%  Similarity=0.909  Sum_probs=67.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||++..............||+.|+|||++.+..
T Consensus       128 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  195 (303)
T 3a7i_A          128 ILKGLDYLHSEKKIHRDIK------------AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA  195 (303)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCCccCCCC------------hheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCC
Confidence            4677889999999999999            6699999999999999999987654433445567999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       196 ~~~~~Di~sl  205 (303)
T 3a7i_A          196 YDSKADIWSL  205 (303)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCchhhhHHH
Confidence            9999999985

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.42  E-value=1.4e-14  Score=109.19  Aligned_cols=78  Identities=29%  Similarity=0.487  Sum_probs=64.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC-CCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      +...++.++|..+++|+|++            ++||+++ .++.++++|||+++.+... .......||+.|+|||++.+
T Consensus       149 qi~~aL~~LH~~gi~H~Dik------------p~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~  215 (383)
T 3eb0_A          149 QLFRAVGFIHSLGICHRDIK------------PQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLG  215 (383)
T ss_dssp             HHHHHHHHHHTTTEECSCCC------------GGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTT
T ss_pred             HHHHHHHHHHHCcCccCccC------------HHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcC
Confidence            45788899999999999999            6699997 5789999999999876443 23345678999999999887


Q ss_pred             C-CCCccceEecC
Q psy3254         166 I-GYDCVADMWSL  177 (177)
Q Consensus       166 ~-~~~~~~Diws~  177 (177)
                      . .|+.++||||+
T Consensus       216 ~~~~~~~~Diwsl  228 (383)
T 3eb0_A          216 ATEYTPSIDLWSI  228 (383)
T ss_dssp             CSSCCTHHHHHHH
T ss_pred             CCCCCcchhhhhH
Confidence            4 58999999985

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.42  E-value=1.9e-14  Score=104.57  Aligned_cols=78  Identities=28%  Similarity=0.493  Sum_probs=66.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.............||+.|+|||++.+..
T Consensus       124 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  191 (294)
T 2rku_A          124 IVLGCQYLHRNRVIHRDLK------------LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG  191 (294)
T ss_dssp             HHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSC
T ss_pred             HHHHHHHHHHCCccccCCC------------hHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCC
Confidence            4677889999999999999            6699999999999999999987654333444567999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       192 ~~~~~Di~sl  201 (294)
T 2rku_A          192 HSFEVDVWSI  201 (294)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCchhhHHHH
Confidence            9999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.41  E-value=2.3e-14  Score=105.08  Aligned_cols=78  Identities=76%  Similarity=1.181  Sum_probs=67.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++.............||+.|+|||++.+..
T Consensus       134 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  201 (314)
T 3com_A          134 TLKGLEYLHFMRKIHRDIK------------AGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  201 (314)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSC
T ss_pred             HHHHHHHHHhCCCcCCCcC------------HHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCC
Confidence            3677889999999999999            6699999999999999999987654433444567999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       202 ~~~~~Di~sl  211 (314)
T 3com_A          202 YNCVADIWSL  211 (314)
T ss_dssp             BCTTHHHHHH
T ss_pred             CCccccHHHH
Confidence            9999999985

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.41  E-value=8.6e-15  Score=108.27  Aligned_cols=79  Identities=24%  Similarity=0.361  Sum_probs=57.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC-----CCCCeEEeeeecccccccccCCCccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN-----TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPE  161 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~-----~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe  161 (177)
                      ....++.++|..+++|++++            ++||+++     ..+.++++|||+++............+||+.|+|||
T Consensus       140 ql~~~l~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE  207 (329)
T 3gbz_A          140 QLINGVNFCHSRRCLHRDLK------------PQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPE  207 (329)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHH
T ss_pred             HHHHHHHHHHhCCEECCCCC------------HHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHH
Confidence            34678889999999999999            6699994     444599999999987654433444567899999999


Q ss_pred             cccCC-CCCccceEecC
Q psy3254         162 VIQEI-GYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~-~~~~~~Diws~  177 (177)
                      ++.+. .++.++|||||
T Consensus       208 ~~~~~~~~~~~~Diwsl  224 (329)
T 3gbz_A          208 ILLGSRHYSTSVDIWSI  224 (329)
T ss_dssp             HHTTCCCCCTHHHHHHH
T ss_pred             HhcCCCCCCcHHHHHHH
Confidence            99874 58999999985

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.41  E-value=1.9e-14  Score=107.79  Aligned_cols=79  Identities=29%  Similarity=0.465  Sum_probs=64.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++.......   .....+||+.|+|||++
T Consensus       136 qi~~aL~~LH~~~ivH~Dik------------p~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  203 (364)
T 3qyz_A          136 QILRGLKYIHSANVLHRDLK------------PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM  203 (364)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHCCeecCCCC------------hHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHh
Confidence            34678889999999999999            6699999999999999999986643321   12346899999999987


Q ss_pred             cC-CCCCccceEecC
Q psy3254         164 QE-IGYDCVADMWSL  177 (177)
Q Consensus       164 ~~-~~~~~~~Diws~  177 (177)
                      .+ ..++.++||||+
T Consensus       204 ~~~~~~~~~~Diwsl  218 (364)
T 3qyz_A          204 LNSKGYTKSIDIWSV  218 (364)
T ss_dssp             HTBCSCSTHHHHHHH
T ss_pred             cCCCCCCcchhHHHH
Confidence            65 458999999985

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.41  E-value=1.8e-14  Score=111.82  Aligned_cols=79  Identities=22%  Similarity=0.294  Sum_probs=66.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe---CCCCCeEEeeeecccccccccC-------CCcccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL---NTEGHAKLADFGVAGQLTDTMA-------KRNTVIGTPF  156 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~---~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~  156 (177)
                      ....++.++|..+++|+|++            ++||++   +.++.++|+|||+++.+.....       .....+||..
T Consensus       111 qi~~aL~yLH~~gIvHrDIK------------P~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~  178 (483)
T 3sv0_A          111 QMINRVEFVHSKSFLHRDIK------------PDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR  178 (483)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTT
T ss_pred             HHHHHHHHHHHCCEeecccC------------cceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCcc
Confidence            34678899999999999999            669999   5788999999999987654321       1225679999


Q ss_pred             ccccccccCCCCCccceEecC
Q psy3254         157 WMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       157 y~aPe~~~~~~~~~~~Diws~  177 (177)
                      |+|||++.+..++.++|||||
T Consensus       179 Y~aPE~~~~~~~s~~sDvwSl  199 (483)
T 3sv0_A          179 YASVNTHLGIEQSRRDDLESL  199 (483)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHH
T ss_pred             ccCHHHhcCCCCChHHHHHHH
Confidence            999999999899999999985

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.41  E-value=9.2e-15  Score=109.75  Aligned_cols=79  Identities=29%  Similarity=0.404  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC---CeEEeeeecccccccc--cCCCccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG---HAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPE  161 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~---~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe  161 (177)
                      ....++.++|..+++|+|++            ++||+++.++   .++++|||+++.+...  ........||+.|+|||
T Consensus       189 qi~~aL~~LH~~~ivHrDlk------------p~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE  256 (367)
T 3l9p_A          189 DIACGCQYLEENHFIHRDIA------------ARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE  256 (367)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHH
T ss_pred             HHHHHHHHHHhCCeeCCCCC------------hhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHH
Confidence            34678889999999999999            6699998555   5999999999865322  12234467899999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      ++.+..++.++|||||
T Consensus       257 ~~~~~~~~~~~Dvwsl  272 (367)
T 3l9p_A          257 AFMEGIFTSKTDTWSF  272 (367)
T ss_dssp             HHHHCCCCHHHHHHHH
T ss_pred             HhcCCCCCcHHHHHHH
Confidence            9988899999999985

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.41  E-value=2e-14  Score=107.28  Aligned_cols=77  Identities=30%  Similarity=0.493  Sum_probs=63.4

Q ss_pred             hHHHHhhhc--hhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLS--YDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~--~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|  ..+++|+|++            ++||+++. ++.++++|||+++.+... .......||+.|+|||++.
T Consensus       138 i~~al~~lH~~~~~ivH~Dlk------------p~NIll~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~  204 (360)
T 3e3p_A          138 LIRSIGCLHLPSVNVCHRDIK------------PHNVLVNEADGTLKLCDFGSAKKLSPS-EPNVAYICSRYYRAPELIF  204 (360)
T ss_dssp             HHHHHHHHTSTTTCCBCSCCC------------GGGEEEETTTTEEEECCCTTCBCCCTT-SCCCSTTSCGGGCCHHHHT
T ss_pred             HHHHHHHHhCCCCCeecCcCC------------HHHEEEeCCCCcEEEeeCCCceecCCC-CCcccccCCcceeCHHHHc
Confidence            356778999  9999999999            66999986 889999999999876543 2334467899999999997


Q ss_pred             CC-CCCccceEecC
Q psy3254         165 EI-GYDCVADMWSL  177 (177)
Q Consensus       165 ~~-~~~~~~Diws~  177 (177)
                      +. .++.++|||||
T Consensus       205 ~~~~~~~~~Di~sl  218 (360)
T 3e3p_A          205 GNQHYTTAVDIWSV  218 (360)
T ss_dssp             TCSSCCTHHHHHHH
T ss_pred             CCCCCCcHHHHHHH
Confidence            64 48999999985

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.41  E-value=2.4e-14  Score=105.46  Aligned_cols=78  Identities=35%  Similarity=0.531  Sum_probs=66.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            +.||+++.++.++++|||+++...... ......||..|+|||++.+.
T Consensus       128 qi~~~l~~lH~~gi~H~dlk------------p~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~  194 (326)
T 1blx_A          128 QLLRGLDFLHSHRVVHRDLK------------PQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAPEVLLQS  194 (326)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTCCEEECSCCSCCCCCGGG-GGCCCCCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCceeccCC------------HHHeEEcCCCCEEEecCcccccccCCC-CccccccccceeCHHHHhcC
Confidence            34678889999999999999            669999999999999999998654332 23346789999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       195 ~~~~~~Di~sl  205 (326)
T 1blx_A          195 SYATPVDLWSV  205 (326)
T ss_dssp             CCCTHHHHHHH
T ss_pred             CCCcchhHHHH
Confidence            89999999985

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.41  E-value=6.8e-15  Score=108.52  Aligned_cols=78  Identities=29%  Similarity=0.403  Sum_probs=63.2

Q ss_pred             hHHHHhhhchh----------hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccc
Q psy3254          88 DFEFLKFLSYD----------DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTP  155 (177)
Q Consensus        88 ~~~~l~~l~~~----------~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~  155 (177)
                      ...++.++|..          +++|+|++            ++||+++.++.++++|||+++.+.....  .....+||+
T Consensus       130 i~~al~~LH~~~~~l~~~~~~~ivH~Dlk------------p~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~  197 (322)
T 3soc_A          130 MARGLAYLHEDIPGLKDGHKPAISHRDIK------------SKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR  197 (322)
T ss_dssp             HHHHHHHHTCCEEEETTEEECEEECSCCS------------GGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCG
T ss_pred             HHHHHHHHHhhccccccccCCCEEeCCCC------------hHhEEECCCCeEEEccCCcccccccccCccccccCccCc
Confidence            36778899998          99999999            6699999999999999999986643322  233467999


Q ss_pred             cccccccccC-----CCCCccceEecC
Q psy3254         156 FWMAPEVIQE-----IGYDCVADMWSL  177 (177)
Q Consensus       156 ~y~aPe~~~~-----~~~~~~~Diws~  177 (177)
                      .|+|||++.+     ..++.++|||||
T Consensus       198 ~y~aPE~~~~~~~~~~~~~~~~Diwsl  224 (322)
T 3soc_A          198 RYMAPEVLEGAINFQRDAFLRIDMYAM  224 (322)
T ss_dssp             GGCCHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred             cccCHhhcccccccCcCCCccchhHHH
Confidence            9999999976     345668899985

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.41  E-value=1.5e-14  Score=109.32  Aligned_cols=78  Identities=26%  Similarity=0.382  Sum_probs=64.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC--CCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT--EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||+++.  .+.++++|||+++.+... ......+||+.|+|||++.
T Consensus       157 qi~~aL~~LH~~givHrDlk------------p~NIll~~~~~~~vkL~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~  223 (387)
T 1kob_A          157 QACEGLKHMHEHSIVHLDIK------------PENIMCETKKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIVD  223 (387)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESSTTCCCEEECCCTTCEECCTT-SCEEEECSSGGGCCHHHHT
T ss_pred             HHHHHHHHHHhCCeeecccc------------hHHeEEecCCCCceEEEecccceecCCC-cceeeeccCCCccCchhcc
Confidence            34678889999999999999            66999974  467999999999876543 2233457999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       224 ~~~~~~~~DiwSl  236 (387)
T 1kob_A          224 REPVGFYTDMWAI  236 (387)
T ss_dssp             TCCBCHHHHHHHH
T ss_pred             CCCCCCcccEeeH
Confidence            8889999999985

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.41  E-value=7.7e-15  Score=109.12  Aligned_cols=78  Identities=28%  Similarity=0.482  Sum_probs=58.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            |+||+++ ++.++++|||+++.+.....  .....+||+.|+|||++.
T Consensus       116 qi~~al~~lH~~~iiHrDik------------p~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  182 (343)
T 3dbq_A          116 NMLEAVHTIHQHGIVHSDLK------------PANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK  182 (343)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHH
T ss_pred             HHHHHHHHHHhCCeecCCCC------------cceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHh
Confidence            34688889999999999999            6699996 67899999999987643322  233567999999999986


Q ss_pred             C-----------CCCCccceEecC
Q psy3254         165 E-----------IGYDCVADMWSL  177 (177)
Q Consensus       165 ~-----------~~~~~~~Diws~  177 (177)
                      +           ..++.++|||||
T Consensus       183 ~~~~~~~~~~~~~~~~~~~Diwsl  206 (343)
T 3dbq_A          183 DMSSSRENGKSKSKISPKSDVWSL  206 (343)
T ss_dssp             HCC-----------CCHHHHHHHH
T ss_pred             hccccccccccccCCCchhhHHHH
Confidence            4           578899999985

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.41  E-value=1.2e-14  Score=107.32  Aligned_cols=79  Identities=25%  Similarity=0.378  Sum_probs=64.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++.+...  .......+||+.|+|||++.
T Consensus       113 qi~~aL~~LH~~givH~Dlk------------p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  180 (323)
T 3tki_A          113 QLMAGVVYLHGIGITHRDIK------------PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK  180 (323)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHH
T ss_pred             HHHHHHHHHHHCCccccccc------------hHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhc
Confidence            34678889999999999999            66999999999999999999865322  22234568999999999998


Q ss_pred             CCCC-CccceEecC
Q psy3254         165 EIGY-DCVADMWSL  177 (177)
Q Consensus       165 ~~~~-~~~~Diws~  177 (177)
                      +..+ +.++|||||
T Consensus       181 ~~~~~~~~~Diwsl  194 (323)
T 3tki_A          181 RREFHAEPVDVWSC  194 (323)
T ss_dssp             CSSBCHHHHHHHHH
T ss_pred             cCCCCCCcccHHHH
Confidence            7665 778999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.40  E-value=1.9e-14  Score=107.29  Aligned_cols=74  Identities=45%  Similarity=0.772  Sum_probs=63.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.....    ...+||+.|+|||++.   
T Consensus       163 i~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~kL~DfG~a~~~~~~----~~~~gt~~y~aPE~~~~~~  226 (348)
T 1u5q_A          163 ALQGLAYLHSHNMIHRDVK------------AGNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMD  226 (348)
T ss_dssp             HHHHHHHHHHTTCBCCCCS------------GGGEEEETTTEEEECCCTTCBSSSSB----CCCCSCGGGCCHHHHHTTS
T ss_pred             HHHHHHHHHhCCeeeCCCC------------HHHEEECCCCCEEEeeccCceecCCC----CcccCCcceeCHhhhcccc
Confidence            3677889999999999999            66999999999999999999765432    3457999999999985   


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       227 ~~~~~~~~Diwsl  239 (348)
T 1u5q_A          227 EGQYDGKVDVWSL  239 (348)
T ss_dssp             SCCBCTHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            4678999999985

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.40  E-value=2.5e-14  Score=106.33  Aligned_cols=76  Identities=32%  Similarity=0.511  Sum_probs=64.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe-------------------CCCCCeEEeeeecccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL-------------------NTEGHAKLADFGVAGQLTDTMAK  147 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~-------------------~~~~~~~l~dfg~~~~~~~~~~~  147 (177)
                      ....++.++|..+++|++++            ++||++                   +.++.++++|||+++.....   
T Consensus       131 qi~~~L~~lH~~~ivH~Dlk------------p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---  195 (355)
T 2eu9_A          131 QLCHALRFLHENQLTHTDLK------------PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH---  195 (355)
T ss_dssp             HHHHHHHHHHTTTEECCCCC------------GGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC---
T ss_pred             HHHHHHHHHHHCCcccCCCC------------HHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc---
Confidence            44788899999999999999            669999                   56788999999999764332   


Q ss_pred             CccccccccccccccccCCCCCccceEecC
Q psy3254         148 RNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       148 ~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ....+||+.|+|||++.+..++.++|||||
T Consensus       196 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  225 (355)
T 2eu9_A          196 HTTIVATRHYRPPEVILELGWAQPCDVWSI  225 (355)
T ss_dssp             CCSSCSCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred             ccCCcCCCcccCCeeeecCCCCCccchHHH
Confidence            334679999999999999899999999985

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.40  E-value=1.8e-14  Score=108.63  Aligned_cols=76  Identities=29%  Similarity=0.380  Sum_probs=64.5

Q ss_pred             chHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCC-------------------------------------
Q psy3254          87 CDFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEG-------------------------------------  128 (177)
Q Consensus        87 ~~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-------------------------------------  128 (177)
                      +...++.++|.. +++|+|++            |+||+++.++                                     
T Consensus       154 qi~~aL~~lH~~~givHrDik------------p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (397)
T 1wak_A          154 QVLQGLDYLHTKCRIIHTDIK------------PENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFL  221 (397)
T ss_dssp             HHHHHHHHHHHTTCEECCCCS------------GGGEEECCCHHHHHHHHHHHC---------------------CCTTS
T ss_pred             HHHHHHHHHHHhCCEecCCCC------------HHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccc
Confidence            346788899998 99999999            6699998765                                     


Q ss_pred             ------------CeEEeeeecccccccccCCCccccccccccccccccCCCCCccceEecC
Q psy3254         129 ------------HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       129 ------------~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                                  .++++|||+++.....   ....+||+.|+|||++.+..|+.++|||||
T Consensus       222 ~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  279 (397)
T 1wak_A          222 VNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIGSGYNTPADIWST  279 (397)
T ss_dssp             CCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHTSCCCTHHHHHHH
T ss_pred             ccccccccccccceEecccccccccccc---CccCCCCCcccCChhhcCCCCCcHHHHHHH
Confidence                        7999999999865432   334579999999999999899999999985

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.40  E-value=1.9e-14  Score=107.36  Aligned_cols=79  Identities=22%  Similarity=0.291  Sum_probs=65.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC--CeEEeeeecccccccccC-------CCccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG--HAKLADFGVAGQLTDTMA-------KRNTVIGTPFW  157 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~--~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~y  157 (177)
                      ....++.++|..+++|++++            ++||+++.++  .++++|||+++.+.....       ......||+.|
T Consensus       167 qi~~~L~~LH~~~ivH~Dik------------p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y  234 (352)
T 2jii_A          167 RLLDALEFLHENEYVHGNVT------------AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEF  234 (352)
T ss_dssp             HHHHHHHHHHHTTCBCSCCC------------GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTT
T ss_pred             HHHHHHHHHHhCCccCCCCC------------HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccc
Confidence            34678889999999999999            6699999988  899999999986643221       12335799999


Q ss_pred             cccccccCCCCCccceEecC
Q psy3254         158 MAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       158 ~aPe~~~~~~~~~~~Diws~  177 (177)
                      +|||++.+..++.++|||||
T Consensus       235 ~aPE~~~~~~~~~~~Di~sl  254 (352)
T 2jii_A          235 ISMDLHKGCGPSRRSDLQSL  254 (352)
T ss_dssp             CCHHHHTTCCCCHHHHHHHH
T ss_pred             cCHHHHccCCCCchhhHHHH
Confidence            99999998899999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.40  E-value=1.9e-14  Score=105.82  Aligned_cols=78  Identities=26%  Similarity=0.438  Sum_probs=64.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe----CCCCCeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL----NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|++++            ++||++    +.++.++++|||+++...... ......||+.|+|||+
T Consensus       120 qi~~~L~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~  186 (319)
T 4euu_A          120 DVVGGMNHLRENGIVHRNIK------------PGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVSLYGTEEYLHPDM  186 (319)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEEEECTTSCEEEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHH
T ss_pred             HHHHHHHHHHHCCEecCCCC------------HHHEEEeccCCCCceEEEccCCCceecCCCC-ceeecccCCCccCHHH
Confidence            34678889999999999999            669998    777789999999998765432 2334679999999999


Q ss_pred             cc--------CCCCCccceEecC
Q psy3254         163 IQ--------EIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~--------~~~~~~~~Diws~  177 (177)
                      +.        +..++.++|||||
T Consensus       187 ~~~~~~~~~~~~~~~~~~Diwsl  209 (319)
T 4euu_A          187 YERAVLRKDHQKKYGATVDLWSI  209 (319)
T ss_dssp             HHHHTSCCCCCCCBCTTHHHHHH
T ss_pred             hhhccccccccCCCCcHHHHHHH
Confidence            86        4678999999985

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.40  E-value=1.4e-14  Score=111.55  Aligned_cols=78  Identities=29%  Similarity=0.412  Sum_probs=64.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++++|||+++...... .......+|..|+|||++...
T Consensus       293 i~~~l~~LH~~~ivHrDlk------------p~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  360 (454)
T 1qcf_A          293 IAEGMAFIEQRNYIHRDLR------------AANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG  360 (454)
T ss_dssp             HHHHHHHHHHTTCCCSSCS------------GGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHhCCccCCCCC------------HHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccC
Confidence            3577889999999999999            669999999999999999998764321 112233467889999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       361 ~~~~~~Dvwsl  371 (454)
T 1qcf_A          361 SFTIKSDVWSF  371 (454)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCcHHHHHhH
Confidence            89999999995

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.40  E-value=1.7e-14  Score=106.23  Aligned_cols=77  Identities=26%  Similarity=0.310  Sum_probs=64.6

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCccccccccccccccccCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ..++.++|..+++|++++            ++||+++.++.++++|||+++......  .......||+.|+|||++.+.
T Consensus       149 ~~~l~~lH~~~ivH~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  216 (321)
T 2qkw_B          149 ARGLHYLHTRAIIHRDVK------------SINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKG  216 (321)
T ss_dssp             HHHHHHHHHTTEECSCCC------------STTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHC
T ss_pred             HHHHHHhcCCCeecCCCC------------HHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCC
Confidence            577889999999999999            669999999999999999998654321  122345689999999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       217 ~~~~~~Di~sl  227 (321)
T 2qkw_B          217 RLTEKSDVYSF  227 (321)
T ss_dssp             BCCTHHHHHHH
T ss_pred             CCCcccchHhH
Confidence            89999999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.40  E-value=1.1e-14  Score=107.34  Aligned_cols=78  Identities=27%  Similarity=0.289  Sum_probs=65.4

Q ss_pred             hHHHHhhhchh---hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccc
Q psy3254          88 DFEFLKFLSYD---DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~~---~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|..   +++|++++            ++||+++.++.++++|||+++....... ......||+.|+|||++
T Consensus       140 i~~~l~~lH~~~~~~ivH~Dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~  207 (326)
T 3uim_A          140 SARGLAYLHDHCDPKIIHRDVK------------AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL  207 (326)
T ss_dssp             HHHHHHHHHHSSSSCEECCCCS------------GGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHhCCCCCeEeCCCc------------hhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHh
Confidence            35788899999   99999999            6699999999999999999986643322 23345699999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       208 ~~~~~~~~~Di~sl  221 (326)
T 3uim_A          208 STGKSSEKTDVFGY  221 (326)
T ss_dssp             HHSEECHHHHHHHH
T ss_pred             ccCCCCccccchhH
Confidence            88889999999985

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.40  E-value=3.2e-14  Score=107.27  Aligned_cols=75  Identities=35%  Similarity=0.487  Sum_probs=62.5

Q ss_pred             hHHHHhhhc--hhhHHHHHhhhchHHHHHHHHhhcceEeC--CCCCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          88 DFEFLKFLS--YDDLQHRMANLDCEMEREIEQLRRNILLN--TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~--~~~~~~~~~~~~~~~~~~i~~l~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|  ..+++|+|++            |+||++.  .++.++++|||+++.....   ....+||+.|+|||++
T Consensus       166 i~~al~~lH~~~~~ivHrDlk------------p~NIll~~~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~  230 (382)
T 2vx3_A          166 MCTALLFLATPELSIIHCDLK------------PENILLCNPKRSAIKIVDFGSSCQLGQR---IYQYIQSRFYRSPEVL  230 (382)
T ss_dssp             HHHHHHHHTSTTTCEECCCCS------------GGGEEESSTTSCCEEECCCTTCEETTCC---CCSSCSCGGGCCHHHH
T ss_pred             HHHHHHHhccCCCCEEcCCCC------------cccEEEecCCCCcEEEEeccCceecccc---cccccCCccccChHHH
Confidence            367788888  5689999999            6699994  4678999999999876432   3356799999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++|||||
T Consensus       231 ~~~~~~~~~DiwSl  244 (382)
T 2vx3_A          231 LGMPYDLAIDMWSL  244 (382)
T ss_dssp             TTCCCCTHHHHHHH
T ss_pred             cCCCCCcHHHHHHH
Confidence            99899999999985

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.40  E-value=1.4e-14  Score=108.97  Aligned_cols=79  Identities=29%  Similarity=0.418  Sum_probs=56.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++.+.....    ......||+.|+|||+
T Consensus       200 qi~~aL~~LH~~~ivHrDlk------------p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~  267 (373)
T 3c1x_A          200 QVAKGMKFLASKKFVHRDLA------------ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES  267 (373)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTCCEEECCC---------------------CCGGGSCHHH
T ss_pred             HHHHHHHHHHHCCEecCccc------------hheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHH
Confidence            34678889999999999999            6699999999999999999986533211    1123457889999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..++.++|||||
T Consensus       268 ~~~~~~~~~~DvwSl  282 (373)
T 3c1x_A          268 LQTQKFTTKSDVWSF  282 (373)
T ss_dssp             HHHCCCCHHHHHHHH
T ss_pred             hcCCCCCcHHHHHHH
Confidence            998899999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.40  E-value=2e-14  Score=103.74  Aligned_cols=77  Identities=27%  Similarity=0.405  Sum_probs=65.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++...... ......||+.|+|||++.+..
T Consensus       131 i~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~  197 (284)
T 2a19_B          131 ITKGVDYIHSKKLINRDLK------------PSNIFLVDTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQD  197 (284)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEEEETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSC
T ss_pred             HHHHHHHHHhCCeeeccCC------------HHHEEEcCCCCEEECcchhheeccccc-cccccCCcccccChhhhccCC
Confidence            4678889999999999999            669999999999999999998765432 233457999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       198 ~~~~~Di~sl  207 (284)
T 2a19_B          198 YGKEVDLYAL  207 (284)
T ss_dssp             CCTHHHHHHH
T ss_pred             CcchhhhHHH
Confidence            9999999985

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.40  E-value=1.9e-13  Score=101.52  Aligned_cols=68  Identities=37%  Similarity=0.727  Sum_probs=60.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+++.+|..+.++.+..+..+|++++|||.+||..||.+|+|+.|+++|||+...
T Consensus       263 ml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          263 MVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence            68999999999999988888776666666567789999999999999999999999999999999864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.40  E-value=2.3e-14  Score=105.59  Aligned_cols=79  Identities=46%  Similarity=0.772  Sum_probs=57.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      ....++.++|..+++|++++            +.||+++.++.++++|||++..............||+.|+|||++.  
T Consensus       137 qi~~~l~~lH~~~ivH~dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  204 (326)
T 2x7f_A          137 EILRGLSHLHQHKVIHRDIK------------GQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD  204 (326)
T ss_dssp             HHHHHHHHHHHTTCCCCCCS------------GGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC--
T ss_pred             HHHHHHHHHHHCCccccCCc------------HHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccc
Confidence            34678889999999999999            6699999999999999999987654333344567999999999997  


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         ...++.++|||||
T Consensus       205 ~~~~~~~~~~~Di~sl  220 (326)
T 2x7f_A          205 ENPDATYDFKSDLWSL  220 (326)
T ss_dssp             ------CCTTHHHHHH
T ss_pred             cccCcCCCccchHHHH
Confidence               4568899999985

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.40  E-value=3.5e-14  Score=104.83  Aligned_cols=76  Identities=30%  Similarity=0.487  Sum_probs=64.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-------------------CCCeEEeeeecccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-------------------EGHAKLADFGVAGQLTDTMAK  147 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-------------------~~~~~l~dfg~~~~~~~~~~~  147 (177)
                      ....++.++|..+++|++++            ++||+++.                   ++.++++|||+++.....   
T Consensus       126 qi~~~l~~lH~~~ivH~Dlk------------p~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---  190 (339)
T 1z57_A          126 QICKSVNFLHSNKLTHTDLK------------PENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH---  190 (339)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC---
T ss_pred             HHHHHHHHHHHCCCcCCCCC------------HHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc---
Confidence            34688889999999999999            66999987                   567999999999764332   


Q ss_pred             CccccccccccccccccCCCCCccceEecC
Q psy3254         148 RNTVIGTPFWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       148 ~~~~~g~~~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      ....+||+.|+|||++.+..++.++|||||
T Consensus       191 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  220 (339)
T 1z57_A          191 HSTLVSTRHYRAPEVILALGWSQPCDVWSI  220 (339)
T ss_dssp             CCSSCSCGGGCCHHHHTTSCCCTHHHHHHH
T ss_pred             cccccCCccccChHHhhCCCCCcchhhHHH
Confidence            335679999999999999899999999985

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.39  E-value=1.1e-14  Score=106.01  Aligned_cols=79  Identities=28%  Similarity=0.507  Sum_probs=61.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.......   ......|+..|+|||++
T Consensus       122 qi~~~l~~lH~~~ivH~Dik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  189 (295)
T 3ugc_A          122 QICKGMEYLGTKRYIHRDLA------------TRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL  189 (295)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHH
T ss_pred             HHHHHHHHHhcCCcccCCCC------------HhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHh
Confidence            34678889999999999999            6699999999999999999987643321   12234577889999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       190 ~~~~~~~~~Di~sl  203 (295)
T 3ugc_A          190 TESKFSVASDVWSF  203 (295)
T ss_dssp             HHCCCCHHHHHHHH
T ss_pred             cCCCCChHHHHHHH
Confidence            98899999999985

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.39  E-value=2.9e-14  Score=105.20  Aligned_cols=77  Identities=25%  Similarity=0.475  Sum_probs=64.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ...++.++|..+++|++++            ++||+++.++ .++++|||+++..... .......||..|+|||++.+ 
T Consensus       139 i~~~l~~lH~~~ivH~Dik------------p~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~~~y~aPE~~~~~  205 (330)
T 3nsz_A          139 ILKALDYCHSMGIMHRDVK------------PHNVMIDHEHRKLRLIDWGLAEFYHPG-QEYNVRVASRYFKGPELLVDY  205 (330)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEEETTTTEEEECCCTTCEECCTT-CCCCSCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHhCCeeeCCCC------------HHHEEEcCCCCEEEEEeCCCceEcCCC-CccccccccccccChhhhcCC
Confidence            3678889999999999999            6699998777 7999999999866543 23345678999999999987 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       206 ~~~~~~~Diwsl  217 (330)
T 3nsz_A          206 QMYDYSLDMWSL  217 (330)
T ss_dssp             CCCCTHHHHHHH
T ss_pred             CcCCchhhHHHH
Confidence            679999999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.39  E-value=3.9e-14  Score=104.31  Aligned_cols=77  Identities=31%  Similarity=0.544  Sum_probs=65.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC----CeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG----HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|..+++|++++            ++||+++.++    .++++|||+++...... ......||+.|+|||++
T Consensus       124 i~~aL~~lH~~~ivH~dik------------p~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~  190 (321)
T 2a2a_A          124 ILDGVNYLHTKKIAHFDLK------------PENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEIV  190 (321)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEESCTTSSSCCEEECCCTTCEECCTTC-CCCCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHhCCeecCCCC------------hHHEEEecCCCCcCCEEEccCccceecCccc-cccccCCCCCccCcccc
Confidence            3678889999999999999            6699998887    79999999998765432 23445799999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       191 ~~~~~~~~~Di~sl  204 (321)
T 2a2a_A          191 NYEPLGLEADMWSI  204 (321)
T ss_dssp             TTCCCCTHHHHHHH
T ss_pred             cCCCCCCccccHHH
Confidence            98899999999985

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.39  E-value=9.9e-15  Score=107.91  Aligned_cols=79  Identities=30%  Similarity=0.373  Sum_probs=59.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++.......  ......||+.|+|||++.
T Consensus       125 qi~~aL~~LH~~~ivH~Dik------------p~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  192 (327)
T 3lzb_A          125 QIAKGMNYLEDRRLVHRDLA------------ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHH
T ss_pred             HHHHHHHHHhhCCCcCCCCC------------HHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHc
Confidence            34678889999999999999            6699999999999999999987643221  122345678899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       193 ~~~~~~~~Di~sl  205 (327)
T 3lzb_A          193 HRIYTHQSDVWSY  205 (327)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCChHHHHHHH
Confidence            8899999999985

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=1.8e-14  Score=106.99  Aligned_cols=79  Identities=29%  Similarity=0.435  Sum_probs=65.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++.......  ......||+.|+|||++.
T Consensus       180 qi~~aL~~LH~~~ivH~Dik------------p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  247 (344)
T 1rjb_A          180 QVAKGMEFLEFKSCVHRDLA------------ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  247 (344)
T ss_dssp             HHHHHHHHHHHTTEEETTCS------------GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCcccCCCC------------hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc
Confidence            34678889999999999999            6699999999999999999986543321  123456788999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       248 ~~~~~~~~Di~sl  260 (344)
T 1rjb_A          248 EGIYTIKSDVWSY  260 (344)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCCChhHhHHHH
Confidence            8889999999985

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=2.7e-14  Score=105.52  Aligned_cols=78  Identities=32%  Similarity=0.455  Sum_probs=61.6

Q ss_pred             hHHHHhhhchh--------hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC----Cccccccc
Q psy3254          88 DFEFLKFLSYD--------DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK----RNTVIGTP  155 (177)
Q Consensus        88 ~~~~l~~l~~~--------~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~g~~  155 (177)
                      ...++.++|..        +++|+|++            ++||+++.++.++++|||+++.+......    ....+||+
T Consensus       143 i~~~l~~lH~~~~~~~~~~~ivH~Dik------------p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~  210 (337)
T 3mdy_A          143 SVSGLCHLHTEIFSTQGKPAIAHRDLK------------SKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK  210 (337)
T ss_dssp             HHHHHHHHHSCBCSTTCBCCEECSCCC------------GGGEEECTTSCEEECCCTTCEECC---------CCSSCSCG
T ss_pred             HHHHHHHHHHhhhhhccCCCEEecccc------------hHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCc
Confidence            36778899988        99999999            66999999999999999999765432211    23457999


Q ss_pred             cccccccccCCCCCcc------ceEecC
Q psy3254         156 FWMAPEVIQEIGYDCV------ADMWSL  177 (177)
Q Consensus       156 ~y~aPe~~~~~~~~~~------~Diws~  177 (177)
                      .|+|||++.+..++..      +|||||
T Consensus       211 ~y~aPE~~~~~~~~~~~~~~~~~Diwsl  238 (337)
T 3mdy_A          211 RYMPPEVLDESLNRNHFQSYIMADMYSF  238 (337)
T ss_dssp             GGCCHHHHTTCCCTTCTHHHHHHHHHHH
T ss_pred             ceeChhhcccccCCccccCccccchHHH
Confidence            9999999987666654      899985

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.39  E-value=2.8e-14  Score=105.43  Aligned_cols=78  Identities=27%  Similarity=0.521  Sum_probs=62.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            ++||+++.   ++.++++|||+++...... .....+||+.|+|||++
T Consensus       139 ql~~~L~~LH~~givH~Dik------------p~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~  205 (327)
T 3lm5_A          139 QILEGVYYLHQNNIVHLDLK------------PQNILLSSIYPLGDIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEIL  205 (327)
T ss_dssp             HHHHHHHHHHHTTEECSCCC------------GGGEEESCBTTBCCEEECCGGGCEEC----------CCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHCCeecCcCC------------hHHEEEecCCCCCcEEEeeCccccccCCcc-ccccccCCcCccCCeee
Confidence            34678889999999999999            66999987   7899999999998765432 23346799999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       206 ~~~~~~~~~Diwsl  219 (327)
T 3lm5_A          206 NYDPITTATDMWNI  219 (327)
T ss_dssp             TTCCCCTHHHHHHH
T ss_pred             cCCCCCchhhHHHH
Confidence            98899999999985

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.39  E-value=1.2e-14  Score=107.79  Aligned_cols=79  Identities=25%  Similarity=0.339  Sum_probs=64.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|+|++            ++||+++.++.++++|||+++......  .......||+.|+|||++.
T Consensus       182 qi~~~l~~LH~~~ivH~Dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  249 (343)
T 1luf_A          182 QVAAGMAYLSERKFVHRDLA------------TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF  249 (343)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCeecCCCC------------cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc
Confidence            34678889999999999999            669999999999999999998654321  1223456889999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       250 ~~~~~~~~Di~sl  262 (343)
T 1luf_A          250 YNRYTTESDVWAY  262 (343)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCcCcccccHHH
Confidence            8889999999985

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.38  E-value=1.9e-14  Score=105.92  Aligned_cols=78  Identities=22%  Similarity=0.313  Sum_probs=58.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|+|++            |+||+++.++.++++|||+++.......  ......+++.|+|||++.+
T Consensus       146 i~~al~~LH~~~ivH~Dik------------p~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (323)
T 3qup_A          146 IACGMEYLSSRNFIHRDLA------------ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLAD  213 (323)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHH
T ss_pred             HHHHHHHHHcCCcccCCCC------------cceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcC
Confidence            4678889999999999999            6699999999999999999986543221  1223456788999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       214 ~~~~~~~Di~sl  225 (323)
T 3qup_A          214 NLYTVHSDVWAF  225 (323)
T ss_dssp             CCCCHHHHHHHH
T ss_pred             CCCCCccchhhH
Confidence            889999999985

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.38  E-value=1.3e-14  Score=109.30  Aligned_cols=77  Identities=25%  Similarity=0.373  Sum_probs=62.7

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccCC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ..++.++|..+++|+|++            ++||+++.++.++++|||+++.......  ......++..|+|||++...
T Consensus       223 ~~~l~~LH~~~ivHrDlk------------p~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  290 (377)
T 3cbl_A          223 AAGMEYLESKCCIHRDLA------------ARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG  290 (377)
T ss_dssp             HHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHC
T ss_pred             HHHHHHHHHCCcCCcccC------------HHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccC
Confidence            567889999999999999            6699999999999999999986543211  11223467789999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       291 ~~~~~~Dvwsl  301 (377)
T 3cbl_A          291 RYSSESDVWSF  301 (377)
T ss_dssp             EEEHHHHHHHH
T ss_pred             CCCchhhHHHH
Confidence            89999999985

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.38  E-value=3.5e-14  Score=106.70  Aligned_cols=75  Identities=28%  Similarity=0.481  Sum_probs=60.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-C
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-I  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.....   ....+||+.|+|||++.+ .
T Consensus       153 i~~aL~~LH~~~ivH~Dik------------p~NIll~~~~~~kL~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~  217 (371)
T 4exu_A          153 MLKGLKYIHSAGVVHRDLK------------PGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSWM  217 (371)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEECTTCCEEECSTTCC-----------CTTCCCTTSCHHHHSCCS
T ss_pred             HHHHHHHHHHCCCcCCCcC------------HHHeEECCCCCEEEEecCcccccccC---cCCcccCccccCHHHhcCCC
Confidence            4678889999999999999            66999999999999999999865432   334678999999999987 6


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       218 ~~~~~~Diwsl  228 (371)
T 4exu_A          218 HYNQTVDIWSV  228 (371)
T ss_dssp             CCCTTHHHHHH
T ss_pred             CCCcHHhHHHH
Confidence            79999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.38  E-value=4.4e-14  Score=102.72  Aligned_cols=78  Identities=26%  Similarity=0.398  Sum_probs=65.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc----CCCccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM----AKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++......    .......||..|+|||.+
T Consensus       133 i~~~l~~LH~~~i~H~dik------------p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  200 (298)
T 3pls_A          133 VARGMEYLAEQKFVHRDLA------------ARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL  200 (298)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHH
T ss_pred             HHHHHHHHHhCCcccCCCC------------cceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhh
Confidence            4678889999999999999            669999999999999999998654321    122345678899999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       201 ~~~~~~~~~Di~sl  214 (298)
T 3pls_A          201 QTYRFTTKSDVWSF  214 (298)
T ss_dssp             TTCCCCHHHHHHHH
T ss_pred             ccCCCChhhchhhH
Confidence            99899999999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.38  E-value=4.2e-14  Score=106.07  Aligned_cols=77  Identities=32%  Similarity=0.579  Sum_probs=63.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC--
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~--  165 (177)
                      ...++.++|..+++|+|++            |.||+++.++.++++|||++..+... ......+||+.|+|||++.+  
T Consensus       209 i~~~L~~LH~~gi~H~Dlk------------p~NIl~~~~~~ikl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~  275 (365)
T 2y7j_A          209 LLEAVSFLHANNIVHRDLK------------PENILLDDNMQIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSM  275 (365)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTT
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHHEEECCCCCEEEEecCcccccCCC-cccccCCCCCCccChhhccccc
Confidence            3577889999999999999            66999999999999999999876543 23345679999999999863  


Q ss_pred             ----CCCCccceEecC
Q psy3254         166 ----IGYDCVADMWSL  177 (177)
Q Consensus       166 ----~~~~~~~Diws~  177 (177)
                          ..++.++|||||
T Consensus       276 ~~~~~~~~~~~Di~sl  291 (365)
T 2y7j_A          276 DETHPGYGKEVDLWAC  291 (365)
T ss_dssp             CTTSCCBCTTHHHHHH
T ss_pred             cccCcCCCchhhHHhH
Confidence                358889999985

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.38  E-value=2.8e-14  Score=104.46  Aligned_cols=78  Identities=29%  Similarity=0.609  Sum_probs=55.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.............|++.|+|||++.+..
T Consensus       145 i~~~l~~LH~~~i~H~dl~------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  212 (310)
T 2wqm_A          145 LCSALEHMHSRRVMHRDIK------------PANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  212 (310)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------GGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCC
T ss_pred             HHHHHHHHhhCCeeCCCCc------------HHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCC
Confidence            3677889999999999999            6699999999999999999986654333334467899999999999889


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       213 ~~~~~Dv~sl  222 (310)
T 2wqm_A          213 YNFKSDIWSL  222 (310)
T ss_dssp             CCHHHHHHHH
T ss_pred             CCchhhHHHH
Confidence            9999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.38  E-value=2.8e-14  Score=109.82  Aligned_cols=76  Identities=29%  Similarity=0.524  Sum_probs=62.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++.....   .....++..|+|||++.+.
T Consensus       297 qi~~~l~~LH~~~ivHrDlk------------p~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~~~~~y~aPE~~~~~  361 (450)
T 1k9a_A          297 DVCEAMEYLEGNNFVHRDLA------------ARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALREK  361 (450)
T ss_dssp             HHHHHHHHHHHTTEECSCCC------------GGGEEECTTSCEEECCCTTCEECC---------CCCTTTSCHHHHHSS
T ss_pred             HHHHHHHHHHhCCeeCCCCC------------HhhEEECCCCCEEEeeCCCccccccc---ccCCCCCcceeCHHHhcCC
Confidence            34678889999999999999            66999999999999999999854322   1223578899999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       362 ~~~~~sDvwsl  372 (450)
T 1k9a_A          362 KFSTKSDVWSF  372 (450)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCcHHHHHHH
Confidence            99999999995

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.38  E-value=4.6e-14  Score=101.98  Aligned_cols=77  Identities=30%  Similarity=0.548  Sum_probs=64.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC---eEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.   ++++|||++...... .......||+.|+|||++.
T Consensus       114 i~~~l~~lH~~~i~H~dik------------p~Nil~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~  180 (284)
T 3kk8_A          114 ILESIAYCHSNGIVHRNLK------------PENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLK  180 (284)
T ss_dssp             HHHHHHHHHHTTEECSCCC------------GGGEEESSSSTTCCEEECCCTTCEECCSS-CBCCCSCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHCCcCcCCCC------------HHHEEEecCCCCCcEEEeeceeeEEcccC-ccccCCCCCcCCcCchhhc
Confidence            3677889999999999999            66999976655   999999999766543 2234467999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++||||+
T Consensus       181 ~~~~~~~~Di~sl  193 (284)
T 3kk8_A          181 KDPYSKPVDIWAC  193 (284)
T ss_dssp             TCCBCTHHHHHHH
T ss_pred             CCCCCcccchHHH
Confidence            9889999999985

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.38  E-value=3.3e-14  Score=108.55  Aligned_cols=78  Identities=33%  Similarity=0.575  Sum_probs=56.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC---CeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|+|++            |+||+++.++   .++++|||+++..... ......+||+.|+|||++
T Consensus       247 qi~~~l~~LH~~~ivHrDlk------------p~NIll~~~~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~  313 (419)
T 3i6u_A          247 QMLLAVQYLHENGIIHRDLK------------PENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL  313 (419)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEESSSSSSCCEEECCSSTTTSCC------------CTTCCTTTT
T ss_pred             HHHHHHHHHHHCCccccCCC------------hHhEEEecCCCcceEEEeecccceecCCC-ccccccCCCCCccCceee
Confidence            34678889999999999999            6699996544   5999999999876543 233456899999999998


Q ss_pred             cC---CCCCccceEecC
Q psy3254         164 QE---IGYDCVADMWSL  177 (177)
Q Consensus       164 ~~---~~~~~~~Diws~  177 (177)
                      .+   ..|+.++|||||
T Consensus       314 ~~~~~~~~~~~~Diwsl  330 (419)
T 3i6u_A          314 VSVGTAGYNRAVDCWSL  330 (419)
T ss_dssp             C----CTTHHHHHHHHH
T ss_pred             ecCCCCCCCchhhhHhH
Confidence            63   568889999985

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.38  E-value=1.3e-14  Score=104.86  Aligned_cols=78  Identities=28%  Similarity=0.447  Sum_probs=54.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++....... ......+|+.|+|||++.+.
T Consensus       125 i~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (281)
T 1mp8_A          125 LSTALAYLESKRFVHRDIA------------ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR  192 (281)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHhCCeeccccc------------HHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccC
Confidence            4677889999999999999            6699999999999999999987644321 12234567889999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       193 ~~~~~~Di~sl  203 (281)
T 1mp8_A          193 RFTSASDVWMF  203 (281)
T ss_dssp             CCSHHHHHHHH
T ss_pred             CCCCccCchHH
Confidence            89999999985

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.38  E-value=6.2e-14  Score=108.84  Aligned_cols=76  Identities=32%  Similarity=0.601  Sum_probs=61.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC---CCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN---TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            |+||+++   .++.++++|||+++..... ......+||+.|+|||++.
T Consensus       130 i~~al~~lH~~~ivH~Dlk------------p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~  196 (486)
T 3mwu_A          130 VFSGITYMHKHNIVHRDLK------------PENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLR  196 (486)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEESSSSTTCCEEECSCSCTTTBCCC-----CCTTGGGGCCGGGGG
T ss_pred             HHHHHHHHHHCCeEeccCc------------hHHEEEecCCCCCCEEEEECCcCeECCCC-CccCCCcCCCCCCCHHHhC
Confidence            3678889999999999999            6699995   4567999999999865443 2334567999999999997


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      + .|+.++||||+
T Consensus       197 ~-~~~~~~Diwsl  208 (486)
T 3mwu_A          197 G-TYDEKCDVWSA  208 (486)
T ss_dssp             S-CCCHHHHHHHH
T ss_pred             C-CCCchhhHHHH
Confidence            6 58999999985

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.38  E-value=1.8e-14  Score=106.47  Aligned_cols=77  Identities=27%  Similarity=0.387  Sum_probs=61.4

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---CccccccccccccccccC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPe~~~~  165 (177)
                      ..++.++|..+++|+|++            ++||+++.++.++++|||+++........   .....+|+.|+|||++.+
T Consensus       161 ~~~L~~LH~~~ivH~Dlk------------p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  228 (325)
T 3kul_A          161 GAGMRYLSDLGYVHRDLA------------ARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF  228 (325)
T ss_dssp             HHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHH
T ss_pred             HHHHHHHHHCCeeCCCCC------------cceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcC
Confidence            577889999999999999            66999999999999999999876443211   122346778999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       229 ~~~~~~~Di~sl  240 (325)
T 3kul_A          229 RTFSSASDVWSF  240 (325)
T ss_dssp             CEECHHHHHHHH
T ss_pred             CCCCcHHHHHHH
Confidence            889999999985

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.38  E-value=4.5e-14  Score=108.21  Aligned_cols=79  Identities=28%  Similarity=0.397  Sum_probs=58.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-----CCCeEEeeeeccccccccc---CCCcccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-----EGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWM  158 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-----~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~  158 (177)
                      ....++.++|..+++|+|++            ++||+++.     ...++++|||+++.+....   ......+||+.|+
T Consensus       126 qi~~aL~~LH~~~ivHrDlK------------p~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~  193 (432)
T 3p23_A          126 QTTSGLAHLHSLNIVHRDLK------------PHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI  193 (432)
T ss_dssp             HHHHHHHHHHHTTCCCCCCS------------TTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSC
T ss_pred             HHHHHHHHHHHCcCEeCCCC------------HHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCcc
Confidence            45788999999999999999            66999943     2357899999998764321   1234467999999


Q ss_pred             cccccc---CCCCCccceEecC
Q psy3254         159 APEVIQ---EIGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~---~~~~~~~~Diws~  177 (177)
                      |||++.   ...++.++|||||
T Consensus       194 APE~l~~~~~~~~t~~~DiwSl  215 (432)
T 3p23_A          194 APEMLSEDCKENPTYTVDIFSA  215 (432)
T ss_dssp             CGGGTSCC---CCCTHHHHHHH
T ss_pred             ChhhhhcccccCCCcHHHHHHH
Confidence            999997   3567889999985

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.38  E-value=4.2e-14  Score=102.05  Aligned_cols=76  Identities=30%  Similarity=0.471  Sum_probs=61.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++......  ......||+.|+|||++.+..
T Consensus       118 i~~~l~~LH~~~i~H~dlk------------p~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~  183 (279)
T 3fdn_A          118 LANALSYCHSKRVIHRDIK------------PENLLLGSAGELKIADFGWSVHAPSS--RRTDLCGTLDYLPPEMIEGRM  183 (279)
T ss_dssp             HHHHHHHHHTTTCEECCCC------------GGGEEECTTSCEEECSCCEESCC----------CCCCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHhCCEecccCC------------hHhEEEcCCCCEEEEeccccccCCcc--cccccCCCCCccCHhHhccCC
Confidence            4678889999999999999            66999999999999999998654332  233467899999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       184 ~~~~~Di~sl  193 (279)
T 3fdn_A          184 HDEKVDLWSL  193 (279)
T ss_dssp             CCTTHHHHHH
T ss_pred             CCccchhHhH
Confidence            9999999985

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.37  E-value=2.4e-14  Score=105.26  Aligned_cols=78  Identities=23%  Similarity=0.421  Sum_probs=64.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++.......  ......||+.|+|||++.+
T Consensus       147 i~~~l~~lH~~~i~H~dik------------p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  214 (322)
T 1p4o_A          147 IADGMAYLNANKFVHRDLA------------ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  214 (322)
T ss_dssp             HHHHHHHHHHTTCBCSCCS------------GGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHCCCccCCCc------------cceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhcc
Confidence            4677889999999999999            6699999999999999999986543221  1233467889999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       215 ~~~~~~~Di~sl  226 (322)
T 1p4o_A          215 GVFTTYSDVWSF  226 (322)
T ss_dssp             CCCCHHHHHHHH
T ss_pred             CCCCchhhHHHH
Confidence            889999999985

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.37  E-value=2.8e-14  Score=104.45  Aligned_cols=79  Identities=30%  Similarity=0.438  Sum_probs=65.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            +.||+++.++.++++|||+++.......  ......||+.|+|||++.
T Consensus       153 qi~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  220 (313)
T 1t46_A          153 QVAKGMAFLASKNCIHRDLA------------ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (313)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHHCCeecCCCc------------cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhc
Confidence            34678889999999999999            6699999999999999999987654322  123456788999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       221 ~~~~~~~~Di~sl  233 (313)
T 1t46_A          221 NCVYTFESDVWSY  233 (313)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCChHHHHHHH
Confidence            8889999999985

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.37  E-value=3.9e-14  Score=105.86  Aligned_cols=77  Identities=27%  Similarity=0.437  Sum_probs=56.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-C
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-I  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++..... .......||+.|+|||++.+ .
T Consensus       143 i~~~l~~lH~~~ivH~Dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~  209 (362)
T 3pg1_A          143 ILLGLHVLHEAGVVHRDLH------------PGNILLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFK  209 (362)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------GGGEEECTTCCEEECCTTC----------------CGGGCCHHHHTTCT
T ss_pred             HHHHHHHHHHCcCEecCCC------------hHHEEEcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCC
Confidence            4678889999999999999            66999999999999999999754432 22344678999999999987 6


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       210 ~~~~~~Diwsl  220 (362)
T 3pg1_A          210 GFTKLVDMWSA  220 (362)
T ss_dssp             TCCTHHHHHHH
T ss_pred             CCCcHhHHHhH
Confidence            78999999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.37  E-value=5.9e-14  Score=101.52  Aligned_cols=76  Identities=28%  Similarity=0.440  Sum_probs=64.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++......  ......|++.|+|||++.+..
T Consensus       123 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~  188 (284)
T 2vgo_A          123 LADALHYCHERKVIHRDIK------------PENLLMGYKGELKIADFGWSVHAPSL--RRRTMCGTLDYLPPEMIEGKT  188 (284)
T ss_dssp             HHHHHHHHHTTTEECCCCS------------GGGEEECTTCCEEECCCTTCEECSSS--CBCCCCSCGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHHCCceecCCC------------HHHEEEcCCCCEEEecccccccCccc--ccccccCCCCcCCHHHhccCC
Confidence            4678889999999999999            66999999999999999998765432  233467999999999999888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       189 ~~~~~Di~sl  198 (284)
T 2vgo_A          189 HDEKVDLWCA  198 (284)
T ss_dssp             BCTTHHHHHH
T ss_pred             CCcccchhhH
Confidence            9999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.37  E-value=3.9e-14  Score=105.41  Aligned_cols=78  Identities=28%  Similarity=0.485  Sum_probs=62.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----------CCccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----------KRNTVIGTPFW  157 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----------~~~~~~g~~~y  157 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.......          .....+||+.|
T Consensus       121 i~~~L~~LH~~~ivH~Dlk------------p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  188 (353)
T 2b9h_A          121 TLRAVKVLHGSNVIHRDLK------------PSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY  188 (353)
T ss_dssp             HHHHHHHHHHTTEECSCCC------------GGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGG
T ss_pred             HHHHHHHHHHCCeecCCCC------------HHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccc
Confidence            4678889999999999999            6699999999999999999986543211          11235789999


Q ss_pred             cccccccC-CCCCccceEecC
Q psy3254         158 MAPEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       158 ~aPe~~~~-~~~~~~~Diws~  177 (177)
                      +|||++.. ..++.++|||||
T Consensus       189 ~aPE~~~~~~~~~~~~Di~sl  209 (353)
T 2b9h_A          189 RAPEVMLTSAKYSRAMDVWSC  209 (353)
T ss_dssp             CCHHHHHSCCCCCHHHHHHHH
T ss_pred             cCCeeeccCCCccchhhHHHH
Confidence            99998865 678999999985

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.37  E-value=2.7e-14  Score=104.63  Aligned_cols=79  Identities=30%  Similarity=0.460  Sum_probs=65.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            +.||+++.++.++++|||+++.......  ......||+.|+|||++.
T Consensus       156 qi~~al~~lH~~~i~H~dik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  223 (316)
T 2xir_A          156 QVAKGMEFLASRKCIHRDLA------------ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  223 (316)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCcccccCc------------cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhc
Confidence            34678889999999999999            6699999999999999999986543221  223456888999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       224 ~~~~~~~~Di~sl  236 (316)
T 2xir_A          224 DRVYTIQSDVWSF  236 (316)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cccccchhHHHHH
Confidence            8889999999985

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.37  E-value=2.8e-14  Score=103.56  Aligned_cols=78  Identities=27%  Similarity=0.501  Sum_probs=55.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCcccccccccccccccc-
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQ-  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~-  164 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++.....  ........||+.|+|||++. 
T Consensus       129 i~~~L~~lH~~~i~H~Dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (289)
T 3og7_A          129 TARGMDYLHAKSIIHRDLK------------SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM  196 (289)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC-
T ss_pred             HHHHHHHHHhCCcccccCc------------cceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcc
Confidence            4678889999999999999            66999999999999999999765421  11223457999999999986 


Q ss_pred             --CCCCCccceEecC
Q psy3254         165 --EIGYDCVADMWSL  177 (177)
Q Consensus       165 --~~~~~~~~Diws~  177 (177)
                        ...++.++|||||
T Consensus       197 ~~~~~~~~~~Di~sl  211 (289)
T 3og7_A          197 QDSNPYSFQSDVYAF  211 (289)
T ss_dssp             ---CCSCHHHHHHHH
T ss_pred             cCCCCCCcccchHHH
Confidence              5678889999985

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.37  E-value=4.6e-14  Score=106.57  Aligned_cols=79  Identities=22%  Similarity=0.394  Sum_probs=64.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-------CCCccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-------AKRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-------~~~~~~~g~~~y~a  159 (177)
                      ....++.++|..+++|+|++            |+||+++.++.++++|||.+.......       ......+||+.|+|
T Consensus       136 qi~~~l~~LH~~~ivHrDlk------------p~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  203 (389)
T 3gni_B          136 GVLKALDYIHHMGYVHRSVK------------ASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS  203 (389)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSC
T ss_pred             HHHHHHHHHHhCCeecCCCC------------HHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccC
Confidence            34678899999999999999            669999999999999999886542211       11223478999999


Q ss_pred             cccccC--CCCCccceEecC
Q psy3254         160 PEVIQE--IGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~--~~~~~~~Diws~  177 (177)
                      ||++.+  ..|+.++|||||
T Consensus       204 PE~~~~~~~~~~~~~Diwsl  223 (389)
T 3gni_B          204 PEVLQQNLQGYDAKSDIYSV  223 (389)
T ss_dssp             HHHHSTTSSCBCTHHHHHHH
T ss_pred             HHHHhccCCCCCcHhHHHHH
Confidence            999987  579999999985

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.37  E-value=3.6e-14  Score=106.31  Aligned_cols=77  Identities=29%  Similarity=0.447  Sum_probs=54.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC--eEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH--AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            ++||+++.++.  ++++|||+++..... ......+||+.|+|||++.+
T Consensus       125 l~~~L~~LH~~~ivH~Dlk------------p~Nill~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~  191 (361)
T 3uc3_A          125 LLSGVSYCHSMQICHRDLK------------LENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLLR  191 (361)
T ss_dssp             HHHHHHHHHHTTCCSCCCC------------GGGEEECSSSSCCEEECCCCCC----------------CTTSCHHHHHC
T ss_pred             HHHHHHHHHHCCcccCCCC------------HHHEEEcCCCCceEEEeecCcccccccc-CCCCCCcCCCCcCChhhhcC
Confidence            3677889999999999999            66999987665  999999999754322 22334679999999999988


Q ss_pred             CCCCcc-ceEecC
Q psy3254         166 IGYDCV-ADMWSL  177 (177)
Q Consensus       166 ~~~~~~-~Diws~  177 (177)
                      ..++.+ +||||+
T Consensus       192 ~~~~~~~~Diwsl  204 (361)
T 3uc3_A          192 QEYDGKIADVWSC  204 (361)
T ss_dssp             SSCCHHHHHHHHH
T ss_pred             CCCCCCeeeeehh
Confidence            777655 899985

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.37  E-value=4.3e-14  Score=102.87  Aligned_cols=79  Identities=28%  Similarity=0.410  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.......    ......||+.|+|||+
T Consensus       136 ql~~~l~~lH~~~i~H~dik------------p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~  203 (298)
T 3f66_A          136 QVAKGMKYLASKKFVHRDLA------------ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES  203 (298)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHH
T ss_pred             HHHHHHHHHHhCCccCCCCc------------hheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHH
Confidence            34678889999999999999            6699999999999999999986543211    1223467889999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..++.++||||+
T Consensus       204 ~~~~~~~~~~Di~sl  218 (298)
T 3f66_A          204 LQTQKFTTKSDVWSF  218 (298)
T ss_dssp             HHHCCCCHHHHHHHH
T ss_pred             hcCCCCChHHHHHHH
Confidence            988889999999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.36  E-value=2.8e-14  Score=107.34  Aligned_cols=78  Identities=29%  Similarity=0.385  Sum_probs=54.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCC---cccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKR---NTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.........   ....++..|+|||++.
T Consensus       156 i~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (373)
T 2qol_A          156 IASGMKYLSDMGYVHRDLA------------ARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA  223 (373)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEECTTCCEEECCC----------------------CTTSCHHHHH
T ss_pred             HHHHHHHHHHCCeeCCCCC------------cceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhc
Confidence            3677889999999999999            669999999999999999998764432111   1223567899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       224 ~~~~~~~~Dv~Sl  236 (373)
T 2qol_A          224 YRKFTSASDVWSY  236 (373)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCcCchhcHHHH
Confidence            8889999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.36  E-value=6.5e-14  Score=103.90  Aligned_cols=79  Identities=32%  Similarity=0.526  Sum_probs=61.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC--CeEEeeeecccccccccC----CCcccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG--HAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAP  160 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~--~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aP  160 (177)
                      ....++.++|..+++|++++            ++||+++.++  .++++|||+++.+.....    ......||+.|+||
T Consensus       176 qi~~~l~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  243 (345)
T 3hko_A          176 QIFSALHYLHNQGICHRDIK------------PENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP  243 (345)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred             HHHHHHHHHHHCCccccCCC------------hhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc
Confidence            34678889999999999999            6699998766  899999999986533211    12346799999999


Q ss_pred             ccccC--CCCCccceEecC
Q psy3254         161 EVIQE--IGYDCVADMWSL  177 (177)
Q Consensus       161 e~~~~--~~~~~~~Diws~  177 (177)
                      |++.+  ..++.++|||||
T Consensus       244 E~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          244 EVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             HHHTCSSSCCCTHHHHHHH
T ss_pred             hhhccCCCCCCcHHHHHHH
Confidence            99975  678999999985

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.36  E-value=3.3e-14  Score=108.97  Aligned_cols=80  Identities=26%  Similarity=0.329  Sum_probs=59.9

Q ss_pred             cchHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-------------CCeEEeeeecccccccccC----CC
Q psy3254          86 FCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-------------GHAKLADFGVAGQLTDTMA----KR  148 (177)
Q Consensus        86 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-------------~~~~l~dfg~~~~~~~~~~----~~  148 (177)
                      .....++.++|..+++|+|++            |+||+++.+             +.++++|||+++.+.....    ..
T Consensus       122 ~qi~~aL~~LH~~~ivHrDLk------------p~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~  189 (434)
T 2rio_A          122 RQIASGVAHLHSLKIIHRDLK------------PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL  189 (434)
T ss_dssp             HHHHHHHHHHHHTTEECCCCS------------GGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC---------
T ss_pred             HHHHHHHHHHHHCCccccCCC------------hHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeee
Confidence            345788999999999999999            669999654             4799999999987654321    12


Q ss_pred             ccccccccccccccccC-------CCCCccceEecC
Q psy3254         149 NTVIGTPFWMAPEVIQE-------IGYDCVADMWSL  177 (177)
Q Consensus       149 ~~~~g~~~y~aPe~~~~-------~~~~~~~Diws~  177 (177)
                      ...+||+.|+|||++.+       ..++.++|||||
T Consensus       190 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSl  225 (434)
T 2rio_A          190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSM  225 (434)
T ss_dssp             -----CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHH
T ss_pred             cCCCCCCCccCHHHhccccccccccCcchhhhhHhH
Confidence            34579999999999975       568999999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.36  E-value=6.7e-13  Score=100.97  Aligned_cols=68  Identities=37%  Similarity=0.727  Sum_probs=61.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+++..|..+.++.+..+..+|++++|||.+||..||.+|+++.|+|+|||+...
T Consensus       340 ml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          340 MVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence            68999999999999999888777666776677899999999999999999999999999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.36  E-value=4.7e-14  Score=103.39  Aligned_cols=79  Identities=22%  Similarity=0.326  Sum_probs=59.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++......  .......+++.|+|||++.
T Consensus       155 qi~~aL~~LH~~~ivH~dik------------p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  222 (313)
T 3brb_A          155 DIALGMEYLSNRNFLHRDLA------------ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA  222 (313)
T ss_dssp             HHHHHHHHHHTTTCCCCCCS------------GGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHH
T ss_pred             HHHHHHHHHHhCCcccCCCC------------cceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhc
Confidence            34678889999999999999            669999999999999999998654321  1122345788999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       223 ~~~~~~~~Di~sl  235 (313)
T 3brb_A          223 DRVYTSKSDVWAF  235 (313)
T ss_dssp             SSCCCHHHHHHHH
T ss_pred             CCCccchhhhHHH
Confidence            9899999999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.35  E-value=9e-14  Score=101.90  Aligned_cols=78  Identities=31%  Similarity=0.413  Sum_probs=54.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++...... .......|++.|+|||++.+.
T Consensus       143 i~~~l~~lH~~~i~H~dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  210 (309)
T 2h34_A          143 IGSALDAAHAAGATHRDVK------------PENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSES  210 (309)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC-
T ss_pred             HHHHHHHHHHCcCCcCCCC------------hHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCC
Confidence            3677889999999999999            669999999999999999997654321 122345789999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       211 ~~~~~~Di~sl  221 (309)
T 2h34_A          211 HATYRADIYAL  221 (309)
T ss_dssp             ---CCCHHHHH
T ss_pred             CCCchHhHHHH
Confidence            89999999985

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.35  E-value=1.7e-14  Score=105.10  Aligned_cols=79  Identities=24%  Similarity=0.482  Sum_probs=65.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---CCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++......   .......||..|+|||++
T Consensus       134 ~i~~~l~~lH~~~i~H~dik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  201 (302)
T 4e5w_A          134 QICKGMDYLGSRQYVHRDLA------------ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECL  201 (302)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHH
T ss_pred             HHHHHHHHhhcCCcccCCCc------------hheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeee
Confidence            34678889999999999999            669999999999999999998765432   123345688899999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++||||+
T Consensus       202 ~~~~~~~~~Di~sl  215 (302)
T 4e5w_A          202 MQSKFYIASDVWSF  215 (302)
T ss_dssp             HHCEEEHHHHHHHH
T ss_pred             cCCCCCcchhHHHH
Confidence            88889999999985

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.35  E-value=1.9e-14  Score=103.74  Aligned_cols=78  Identities=32%  Similarity=0.543  Sum_probs=62.4

Q ss_pred             hHHHHhhhchhh-----HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          88 DFEFLKFLSYDD-----LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        88 ~~~~l~~l~~~~-----~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ...++.++|..+     ++|++++            ++||+++.++.++++|||+++.............||+.|+|||+
T Consensus       120 i~~~l~~lH~~~~~~~~ivH~dl~------------p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  187 (279)
T 2w5a_A          120 LTLALKECHRRSDGGHTVLHRDLK------------PANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ  187 (279)
T ss_dssp             HHHHHHHHHHHC------CCCCCS------------GGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHH
T ss_pred             HHHHHHHHhcccCCCCeeEEeccc------------hhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHH
Confidence            467788999998     9999999            66999999999999999999866543222234578999999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..++.++|||||
T Consensus       188 ~~~~~~~~~~Di~sl  202 (279)
T 2w5a_A          188 MNRMSYNEKSDIWSL  202 (279)
T ss_dssp             HHCC-CCHHHHHHHH
T ss_pred             hccCCCCchhhHHHH
Confidence            998889999999985

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.35  E-value=7e-14  Score=104.24  Aligned_cols=76  Identities=28%  Similarity=0.464  Sum_probs=61.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.....   ....+||+.|+|||++.+ 
T Consensus       134 qi~~al~~LH~~~ivH~dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~---~~~~~~t~~y~aPE~~~~~  198 (353)
T 3coi_A          134 QMLKGLKYIHSAGVVHRDLK------------PGNLAVNEDCELKILDFGLARHADAE---MTGYVVTRWYRAPEVILSW  198 (353)
T ss_dssp             HHHHHHHHHHHTTCCCSSCC------------GGGEEECTTCCEEECSTTCTTC-----------CCSBCCSCHHHHSCC
T ss_pred             HHHHHHHHHHHCCcccCCCC------------HHHEeECCCCcEEEeecccccCCCCC---ccccccCcCcCCHHHHhCc
Confidence            34678889999999999999            66999999999999999999765432   234578999999999987 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       199 ~~~~~~~Di~sl  210 (353)
T 3coi_A          199 MHYNQTVDIWSV  210 (353)
T ss_dssp             SCCCTTHHHHHH
T ss_pred             CCCCchhhHHHH
Confidence            678999999985

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.35  E-value=3.7e-14  Score=109.98  Aligned_cols=76  Identities=28%  Similarity=0.596  Sum_probs=63.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe---CCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL---NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            |+||++   +.++.++++|||+++..... ......+||+.|+|||++.
T Consensus       135 i~~~l~~lH~~~ivH~Dlk------------p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~  201 (484)
T 3nyv_A          135 VLSGITYMHKNKIVHRDLK------------PENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLH  201 (484)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEESSSSTTCCEEECCTTHHHHBCCC-CSHHHHTTGGGTCCHHHHH
T ss_pred             HHHHHHHHHHCCeeeCCCC------------HHHEEEecCCCCCcEEEEeeeeeEEcccc-cccccCCCCccccCceeec
Confidence            3678889999999999999            669999   46788999999999876543 2234467999999999987


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      + .|+.++||||+
T Consensus       202 ~-~~~~~~Diwsl  213 (484)
T 3nyv_A          202 G-TYDEKCDVWST  213 (484)
T ss_dssp             T-CCCTHHHHHHH
T ss_pred             C-CCCCcceeHHH
Confidence            6 68999999985

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.35  E-value=2.9e-14  Score=102.39  Aligned_cols=78  Identities=26%  Similarity=0.374  Sum_probs=64.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++...... .......||+.|+|||++.+.
T Consensus       115 i~~~l~~lH~~~i~H~dik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (269)
T 4hcu_A          115 VCEGMAYLEEACVIHRDLA------------ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS  182 (269)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHhCCeecCCcc------------hheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCC
Confidence            4678889999999999999            669999999999999999998654321 122334577889999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       183 ~~~~~~Di~sl  193 (269)
T 4hcu_A          183 RYSSKSDVWSF  193 (269)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCchhhhHHH
Confidence            89999999985

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.35  E-value=2.2e-14  Score=114.67  Aligned_cols=78  Identities=29%  Similarity=0.435  Sum_probs=61.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++|+|||+++.+.....   ......||+.|+|||++.
T Consensus       478 i~~~L~yLH~~~iiHrDLk------------p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~  545 (635)
T 4fl3_A          478 VSMGMKYLEESNFVHRDLA------------ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN  545 (635)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHH
T ss_pred             HHHHHHHHHHCCEeCCCCC------------hHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhc
Confidence            3577889999999999999            6699999999999999999987643321   122345678899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       546 ~~~~~~~sDvwSl  558 (635)
T 4fl3_A          546 YYKFSSKSDVWSF  558 (635)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            8899999999985

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.35  E-value=3.2e-14  Score=109.57  Aligned_cols=78  Identities=26%  Similarity=0.336  Sum_probs=59.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++++|||+++...... .......++..|+|||++...
T Consensus       289 i~~~l~~LH~~~ivHrDlk------------p~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  356 (452)
T 1fmk_A          289 IASGMAYVERMNYVHRDLR------------AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  356 (452)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHhCCeeCCCCC------------hhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcC
Confidence            3677889999999999999            669999999999999999998654321 112234567899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       357 ~~~~~sDvwsl  367 (452)
T 1fmk_A          357 RFTIKSDVWSF  367 (452)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCccccHHhH
Confidence            89999999985

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.35  E-value=2.5e-14  Score=105.76  Aligned_cols=79  Identities=30%  Similarity=0.462  Sum_probs=65.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            |+||+++.++.++++|||+++.......  ......||+.|+|||++.
T Consensus       172 qi~~~l~~lH~~~ivH~Dlk------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  239 (333)
T 2i1m_A          172 QVAQGMAFLASKNCIHRDVA------------ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF  239 (333)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH
T ss_pred             HHHHHHHHHhcCCcccCCcc------------cceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhc
Confidence            34678889999999999999            6699999999999999999986543221  123456788999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       240 ~~~~~~~~Di~sl  252 (333)
T 2i1m_A          240 DCVYTVQSDVWSY  252 (333)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCCChHHHHHHH
Confidence            8889999999985

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.35  E-value=8.1e-14  Score=101.31  Aligned_cols=79  Identities=28%  Similarity=0.482  Sum_probs=59.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--------------cCCCcccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--------------MAKRNTVI  152 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--------------~~~~~~~~  152 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.....              ........
T Consensus       124 qi~~~l~~LH~~~i~H~dlk------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (303)
T 1zy4_A          124 QILEALSYIHSQGIIHRDLK------------PMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI  191 (303)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTSCEEECCCCCCSCTTC-----------------------
T ss_pred             HHHHHHHHHHhCCeecccCC------------HHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCC
Confidence            34678889999999999999            66999999999999999999765421              11223457


Q ss_pred             ccccccccccccCC-CCCccceEecC
Q psy3254         153 GTPFWMAPEVIQEI-GYDCVADMWSL  177 (177)
Q Consensus       153 g~~~y~aPe~~~~~-~~~~~~Diws~  177 (177)
                      ||+.|+|||++.+. .++.++|||||
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~~Di~sl  217 (303)
T 1zy4_A          192 GTAMYVATEVLDGTGHYNEKIDMYSL  217 (303)
T ss_dssp             --CTTSCHHHHTSCSCCCTHHHHHHH
T ss_pred             CcccccCcccccCCCCCcchhhHHHH
Confidence            89999999999864 68999999985

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.35  E-value=3.1e-14  Score=113.45  Aligned_cols=78  Identities=29%  Similarity=0.417  Sum_probs=60.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++++|||+++.+.....   ......+++.|+|||++.
T Consensus       445 i~~~L~~LH~~~iiHrDlk------------p~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~  512 (613)
T 2ozo_A          445 VSMGMKYLEEKNFVHRNLA------------ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN  512 (613)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHH
T ss_pred             HHHHHHHHHHCCEEcCcCC------------HHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhc
Confidence            3678889999999999999            6699999999999999999987643211   112234568899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       513 ~~~~~~~sDvwSl  525 (613)
T 2ozo_A          513 FRKFSSRSDVWSY  525 (613)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            8899999999985

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.35  E-value=4.6e-14  Score=105.71  Aligned_cols=76  Identities=25%  Similarity=0.356  Sum_probs=63.1

Q ss_pred             chHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeC------CCCCeEEeeeecccccccccCCCccccccccccc
Q psy3254          87 CDFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLN------TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~------~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~a  159 (177)
                      ....++.++|.. +++|+|++            ++||+++      ..+.++++|||+++.....   ....+||+.|+|
T Consensus       139 qi~~aL~~lH~~~~ivH~Dik------------p~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~a  203 (373)
T 1q8y_A          139 QLLLGLDYMHRRCGIIHTDIK------------PENVLMEIVDSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRS  203 (373)
T ss_dssp             HHHHHHHHHHHTTCEECSCCS------------GGGEEEEEEETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCC
T ss_pred             HHHHHHHHHHhcCCEEecCCC------------hHHeEEeccCCCcCcceEEEcccccccccCCC---CCCCCCCccccC
Confidence            346788899998 99999999            6699994      3447999999999865432   234578999999


Q ss_pred             cccccCCCCCccceEecC
Q psy3254         160 PEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~~~~~~~~Diws~  177 (177)
                      ||++.+..++.++|||||
T Consensus       204 PE~~~~~~~~~~~Di~sl  221 (373)
T 1q8y_A          204 PEVLLGAPWGCGADIWST  221 (373)
T ss_dssp             HHHHHTCCCCTHHHHHHH
T ss_pred             cHHHhCCCCCchHhHHHH
Confidence            999999899999999985

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.35  E-value=2.6e-14  Score=111.24  Aligned_cols=79  Identities=23%  Similarity=0.370  Sum_probs=64.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++|||+++...... .......++..|+|||++..
T Consensus       326 qi~~~L~~LH~~~ivHrDlk------------p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~  393 (495)
T 1opk_A          326 QISSAMEYLEKKNFIHRNLA------------ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY  393 (495)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHhCCcccCCCC------------hhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhc
Confidence            34677889999999999999            669999999999999999998764321 11223446788999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       394 ~~~~~~sDvwSl  405 (495)
T 1opk_A          394 NKFSIKSDVWAF  405 (495)
T ss_dssp             CEECHHHHHHHH
T ss_pred             CCCCcHHhHHhH
Confidence            889999999995

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.35  E-value=3.1e-14  Score=104.22  Aligned_cols=79  Identities=28%  Similarity=0.389  Sum_probs=65.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|++++            ++||+++.++.++++|||+++.......  ......||+.|+|||++.
T Consensus       158 qi~~~l~~lH~~~ivH~dik------------p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  225 (314)
T 2ivs_A          158 QISQGMQYLAEMKLVHRDLA------------ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF  225 (314)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHCCCcccccc------------hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhc
Confidence            34688889999999999999            6699999999999999999986543221  223345788999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       226 ~~~~~~~~Di~sl  238 (314)
T 2ivs_A          226 DHIYTTQSDVWSF  238 (314)
T ss_dssp             HCEECHHHHHHHH
T ss_pred             CCCcCchhhHHHH
Confidence            8889999999985

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.35  E-value=8.8e-14  Score=108.21  Aligned_cols=76  Identities=29%  Similarity=0.609  Sum_probs=62.4

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC---CCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            |+||+++..   +.++++|||+++..... ......+||+.|+|||++.
T Consensus       145 i~~~l~~lH~~~ivH~Dlk------------p~Nil~~~~~~~~~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~  211 (494)
T 3lij_A          145 VLSGVTYLHKHNIVHRDLK------------PENLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYIAPEVLR  211 (494)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEESCSSTTCCEEECCCTTCEECBTT-BCBCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHHHCCceeccCC------------hhhEEEeCCCCCCcEEEEECCCCeECCCC-ccccccCCCcCeeCHHHHc
Confidence            3678889999999999999            669999764   45999999999876543 2334567999999999986


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      + .|+.++||||+
T Consensus       212 ~-~~~~~~Diwsl  223 (494)
T 3lij_A          212 K-KYDEKCDVWSI  223 (494)
T ss_dssp             T-CBCTHHHHHHH
T ss_pred             c-cCCCchhHHHH
Confidence            4 68999999985

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.34  E-value=4.4e-14  Score=105.56  Aligned_cols=76  Identities=39%  Similarity=0.690  Sum_probs=62.4

Q ss_pred             hHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|.. +++|++++            +.||+++.++.++++|||+++.....  ......||+.|+|||++.+.
T Consensus       140 i~~~l~~lh~~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~  205 (360)
T 3eqc_A          140 VIKGLTYLREKHKIMHRDVK------------PSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQGT  205 (360)
T ss_dssp             HHHHHHHHHHHHCCCCSCCS------------GGGEEECTTCCEEECCCCCCHHHHHH--C----CCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHhCCEEcCCcc------------HHHEEECCCCCEEEEECCCCcccccc--cccCCCCCCCeECHHHHcCC
Confidence            35778899986 89999999            66999999999999999999765432  22345799999999999998


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       206 ~~~~~~Di~sl  216 (360)
T 3eqc_A          206 HYSVQSDIWSM  216 (360)
T ss_dssp             CCSHHHHHHHH
T ss_pred             CCCchhhHHHH
Confidence            99999999985

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.34  E-value=1.1e-13  Score=99.75  Aligned_cols=76  Identities=26%  Similarity=0.495  Sum_probs=63.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe---CCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL---NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            +.||++   +.++.++++|||++...... .......||+.|+|||++.
T Consensus       115 i~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~  181 (277)
T 3f3z_A          115 VLSAVAYCHKLNVAHRDLK------------PENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLE  181 (277)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEESSSSTTCCEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHHHCCccCCCCC------------HHHEEEecCCCCCcEEEEecccceeccCc-cchhccCCCCCccChHHhc
Confidence            3677889999999999999            669999   77889999999999866543 2334467999999999986


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      + .++.++|||||
T Consensus       182 ~-~~~~~~Di~sl  193 (277)
T 3f3z_A          182 G-LYGPECDEWSA  193 (277)
T ss_dssp             T-CBCTTHHHHHH
T ss_pred             c-cCCchhhehhH
Confidence            6 48999999985

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.34  E-value=4.8e-14  Score=101.89  Aligned_cols=78  Identities=26%  Similarity=0.450  Sum_probs=64.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||+++...... .......||+.|+|||++.+.
T Consensus       129 i~~~l~~lH~~~i~H~dik------------p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  196 (283)
T 3gen_A          129 VCEAMEYLESKQFLHRDLA------------ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS  196 (283)
T ss_dssp             HHHHHHHHHHTTCCCSSCS------------GGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHCCccCCCCc------------cceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccC
Confidence            3577889999999999999            669999999999999999998654321 122234567889999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       197 ~~~~~~Dv~sl  207 (283)
T 3gen_A          197 KFSSKSDIWAF  207 (283)
T ss_dssp             CCSHHHHHHHH
T ss_pred             CCCchhhHHHH
Confidence            89999999985

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.34  E-value=4e-14  Score=102.24  Aligned_cols=78  Identities=27%  Similarity=0.405  Sum_probs=62.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++....... ......||..|+|||++.+.
T Consensus       122 i~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  189 (281)
T 3cc6_A          122 ICKAMAYLESINCVHRDIA------------VRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR  189 (281)
T ss_dssp             HHHHHHHHHHTTCCCCCCS------------GGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHHCCcccCCCc------------cceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccC
Confidence            3677889999999999999            6699999999999999999986543321 22334578899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       190 ~~~~~~Di~sl  200 (281)
T 3cc6_A          190 RFTTASDVWMF  200 (281)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCchhccHHH
Confidence            89999999985

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.34  E-value=6.3e-14  Score=103.44  Aligned_cols=78  Identities=27%  Similarity=0.466  Sum_probs=50.7

Q ss_pred             hHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC------------CCccccc
Q psy3254          88 DFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA------------KRNTVIG  153 (177)
Q Consensus        88 ~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~g  153 (177)
                      ...++.++|..+  ++|+|++            +.||+++.++.++++|||+++.......            ......|
T Consensus       145 i~~~l~~LH~~~~~ivH~Dik------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (337)
T 3ll6_A          145 TCRAVQHMHRQKPPIIHRDLK------------VENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT  212 (337)
T ss_dssp             HHHHHHHHHTSSSCCBCCCCC------------GGGCEECTTSCEEBCCCTTCBCCSSCC--------------------
T ss_pred             HHHHHHHHHhCCCCEEEccCC------------cccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccC
Confidence            467888999999  9999999            6699999999999999999986543211            1113568


Q ss_pred             cccccccccc---cCCCCCccceEecC
Q psy3254         154 TPFWMAPEVI---QEIGYDCVADMWSL  177 (177)
Q Consensus       154 ~~~y~aPe~~---~~~~~~~~~Diws~  177 (177)
                      |+.|+|||++   .+..++.++|||||
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~Dv~sl  239 (337)
T 3ll6_A          213 TPMYRTPEIIDLYSNFPIGEKQDIWAL  239 (337)
T ss_dssp             -----------CCTTSCSSHHHHHHHH
T ss_pred             CCCcCChhhhhccccCCCChHHhHHHH
Confidence            9999999998   45678899999985

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.34  E-value=5.3e-14  Score=101.89  Aligned_cols=78  Identities=35%  Similarity=0.619  Sum_probs=54.5

Q ss_pred             chHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI--  163 (177)
Q Consensus        87 ~~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~--  163 (177)
                      ....++.++|.. +++|++++            ++||+++.++.++++|||+++..... .......||+.|+|||++  
T Consensus       117 qi~~~l~~lH~~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~  183 (290)
T 3fme_A          117 SIVKALEHLHSKLSVIHRDVK------------PSNVLINALGQVKMCDFGISGYLVDD-VAKDIDAGCKPYMAPERINP  183 (290)
T ss_dssp             HHHHHHHHHHHHSCCCCCCCS------------GGGCEECTTCCEEBCCC----------------CCCCCCSCHHHHSC
T ss_pred             HHHHHHHHHhhcCCeecCCCC------------HHHEEECCCCCEEEeecCCccccccc-ccccccCCCccccChhhcCh
Confidence            346788899998 99999999            66999999999999999999866443 223335799999999996  


Q ss_pred             --cCCCCCccceEecC
Q psy3254         164 --QEIGYDCVADMWSL  177 (177)
Q Consensus       164 --~~~~~~~~~Diws~  177 (177)
                        ....++.++||||+
T Consensus       184 ~~~~~~~~~~~Di~sl  199 (290)
T 3fme_A          184 ELNQKGYSVKSDIWSL  199 (290)
T ss_dssp             CTTC--CCHHHHHHHH
T ss_pred             hhcCcCCCcHHHHHHH
Confidence              45678899999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.34  E-value=6.6e-13  Score=97.28  Aligned_cols=71  Identities=21%  Similarity=0.324  Sum_probs=60.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHh------hhcCcccccCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE------MLNHEFIQVSPGGNIP   74 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~------~l~h~~~~~~~~~~~~   74 (177)
                      |+||++||.+.+..+++.+|.+..   +..|..+|++++|||.+||+.||.+|+|++|      +++||||+...+..+.
T Consensus       227 ml~G~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~  303 (311)
T 4aw0_A          227 LVAGLPPFRAGNEGLIFAKIIKLE---YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH  303 (311)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTC---CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGG
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCC---CCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhc
Confidence            689999999999999998887763   3336789999999999999999999999988      4789999877665543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.34  E-value=9.1e-14  Score=101.51  Aligned_cols=76  Identities=28%  Similarity=0.495  Sum_probs=63.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe---CCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL---NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||++   +.++.++++|||+++.....  ......||+.|+|||++.
T Consensus       115 i~~~l~~lH~~~i~H~dik------------p~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~  180 (304)
T 2jam_A          115 VLSAVKYLHENGIVHRDLK------------PENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPEVLA  180 (304)
T ss_dssp             HHHHHHHHHHTTCCCCSCC------------GGGCEESSSSTTCCEEBCSCSTTCCCCCB--TTHHHHSCCCBCCTTTBS
T ss_pred             HHHHHHHHHHCCccccCCC------------HHHEEEecCCCCCCEEEccCCcceecCCC--ccccccCCCCccChHHhc
Confidence            3678889999999999999            669999   77889999999998754332  233457999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++||||+
T Consensus       181 ~~~~~~~~Di~sl  193 (304)
T 2jam_A          181 QKPYSKAVDCWSI  193 (304)
T ss_dssp             SCSCCHHHHHHHH
T ss_pred             cCCCCchhhHHHH
Confidence            8899999999985

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.33  E-value=5e-14  Score=102.26  Aligned_cols=79  Identities=39%  Similarity=0.606  Sum_probs=63.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-CCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++||+++. ++.++++|||+++.............||+.|+|||++.+
T Consensus       130 qi~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  197 (295)
T 2clq_A          130 QILEGLKYLHDNQIVHRDIK------------GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK  197 (295)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHhCCEEccCCC------------hhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcC
Confidence            34678889999999999999            66999987 889999999999876543333445679999999999976


Q ss_pred             C--CCCccceEecC
Q psy3254         166 I--GYDCVADMWSL  177 (177)
Q Consensus       166 ~--~~~~~~Diws~  177 (177)
                      .  .++.++|||||
T Consensus       198 ~~~~~~~~~Di~sl  211 (295)
T 2clq_A          198 GPRGYGKAADIWSL  211 (295)
T ss_dssp             GGGGCSHHHHHHHH
T ss_pred             CCCCCCcHHHHHHH
Confidence            4  38899999985

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.33  E-value=5.6e-14  Score=104.03  Aligned_cols=79  Identities=28%  Similarity=0.416  Sum_probs=65.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.......  ......+|+.|+|||++.
T Consensus       165 qi~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  232 (334)
T 2pvf_A          165 QLARGMEYLASQKCIHRDLA------------ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF  232 (334)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCeeCCCCc------------cceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhc
Confidence            34678889999999999999            6699999999999999999986543221  122345788999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       233 ~~~~~~~~Di~sl  245 (334)
T 2pvf_A          233 DRVYTHQSDVWSF  245 (334)
T ss_dssp             HCEECHHHHHHHH
T ss_pred             CCCcChHHHHHHH
Confidence            8889999999985

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.33  E-value=4.5e-14  Score=101.27  Aligned_cols=78  Identities=27%  Similarity=0.413  Sum_probs=63.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++....... ......||+.|+|||++.+.
T Consensus       113 i~~~l~~lH~~~i~H~dik------------p~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  180 (268)
T 3sxs_A          113 VCEGMAFLESHQFIHRDLA------------ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYF  180 (268)
T ss_dssp             HHHHHHHHHHTTEEESSCS------------GGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHS
T ss_pred             HHHHHHHHHHCCeecCCcC------------cceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhcc
Confidence            3677889999999999999            6699999999999999999986543311 12234467789999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       181 ~~~~~~Di~sl  191 (268)
T 3sxs_A          181 KYSSKSDVWAF  191 (268)
T ss_dssp             EEETTHHHHHH
T ss_pred             CCchhhhhHHH
Confidence            89999999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.33  E-value=4.3e-14  Score=102.97  Aligned_cols=78  Identities=46%  Similarity=0.831  Sum_probs=60.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      ...++.++|..+++|++++            +.||+++.++.++++|||++..............||..|+|||++.   
T Consensus       126 i~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  193 (302)
T 2j7t_A          126 MLEALNFLHSKRIIHRDLK------------AGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCET  193 (302)
T ss_dssp             HHHHHHHHHHTTCCCCCCS------------GGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHH
T ss_pred             HHHHHHHHhcCCcccCCCC------------HHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeecccc
Confidence            3677889999999999999            6699999999999999999865432222334467999999999983   


Q ss_pred             --CCCCCccceEecC
Q psy3254         165 --EIGYDCVADMWSL  177 (177)
Q Consensus       165 --~~~~~~~~Diws~  177 (177)
                        ...++.++|||||
T Consensus       194 ~~~~~~~~~~Di~sl  208 (302)
T 2j7t_A          194 MKDTPYDYKADIWSL  208 (302)
T ss_dssp             TTSTTTTTHHHHHHH
T ss_pred             CCCCCCchhhhHHHH
Confidence              5678899999985

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.33  E-value=4.4e-13  Score=96.74  Aligned_cols=64  Identities=20%  Similarity=0.326  Sum_probs=56.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |+||++||.+.+..+++.+|..+. +.  .|..+|+++++||.+||..||.+|+|++|+++|||++.
T Consensus       205 lltg~~PF~~~~~~~~~~~i~~~~-~~--~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          205 MLCRRLPFDDESIPVLFKNISNGV-YT--LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTC-CC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             HHHCCCCCCCCCHHHHHHHHHcCC-CC--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence            689999999999888888886653 23  36778999999999999999999999999999999974

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.32  E-value=8.2e-14  Score=102.75  Aligned_cols=77  Identities=40%  Similarity=0.695  Sum_probs=46.1

Q ss_pred             hHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccc---
Q psy3254          88 DFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI---  163 (177)
Q Consensus        88 ~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~---  163 (177)
                      ...++.++|.. +++|++++            +.||+++.++.++++|||+++...... ......||+.|+|||++   
T Consensus       134 i~~~l~~lH~~~~ivH~dlk------------p~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~  200 (327)
T 3aln_A          134 TVKALNHLKENLKIIHRDIK------------PSNILLDRSGNIKLCDFGISGQLVDSI-AKTRDAGCRPYMAPERIDPS  200 (327)
T ss_dssp             HHHHHHHHHHHHSCCCSCCC------------GGGEEEETTTEEEECCCSSSCC--------------------------
T ss_pred             HHHHHHHHhccCCEeECCCC------------HHHEEEcCCCCEEEccCCCceeccccc-ccccCCCCccccCceeeccc
Confidence            36778899998 99999999            669999999999999999998664432 22334799999999998   


Q ss_pred             -cCCCCCccceEecC
Q psy3254         164 -QEIGYDCVADMWSL  177 (177)
Q Consensus       164 -~~~~~~~~~Diws~  177 (177)
                       .+..++.++|||||
T Consensus       201 ~~~~~~~~~~Di~sl  215 (327)
T 3aln_A          201 ASRQGYDVRSDVWSL  215 (327)
T ss_dssp             -----CCSHHHHHHH
T ss_pred             cCcCCCCchhhHHHH
Confidence             45668999999985

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.32  E-value=5.1e-14  Score=110.57  Aligned_cols=78  Identities=26%  Similarity=0.336  Sum_probs=64.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|+|++            ++||+++.++.++|+|||+++.+.... .......++..|+|||++...
T Consensus       372 i~~~L~~LH~~~ivHrDlk------------p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  439 (535)
T 2h8h_A          372 IASGMAYVERMNYVHRDLR------------AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  439 (535)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHC
T ss_pred             HHHHHHHHHhCCeeCCCCC------------HhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccC
Confidence            4677889999999999999            669999999999999999998664321 112234567889999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       440 ~~~~~sDvwSl  450 (535)
T 2h8h_A          440 RFTIKSDVWSF  450 (535)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCchhhHHHH
Confidence            89999999985

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.32  E-value=1e-13  Score=101.58  Aligned_cols=75  Identities=31%  Similarity=0.468  Sum_probs=56.9

Q ss_pred             hHHHHhhhch---hhHHHHHhhhchHHHHHHHHhhcceEeCCCCC-eEEeeeecccccccccCCCccccccccccccccc
Q psy3254          88 DFEFLKFLSY---DDLQHRMANLDCEMEREIEQLRRNILLNTEGH-AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~---~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|.   .+++|++++            ++||+++.++. ++++|||++......   .....||+.|+|||++
T Consensus       111 i~~~l~~LH~~~~~~ivH~dlk------------p~NIll~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~  175 (307)
T 2eva_A          111 CSQGVAYLHSMQPKALIHRDLK------------PPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVF  175 (307)
T ss_dssp             HHHHHHHHHTCSSSCCCCCCCS------------GGGEEEETTTTEEEECCCCC---------------CCTTSSCHHHH
T ss_pred             HHHHHHHHHhCCCCCeecCCCC------------hhHEEEeCCCCEEEEcccccccccccc---cccCCCCCceEChhhh
Confidence            3578889998   789999999            66999988886 799999999765432   2234689999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       176 ~~~~~~~~~Di~sl  189 (307)
T 2eva_A          176 EGSNYSEKCDVFSW  189 (307)
T ss_dssp             TCCCCCTHHHHHHH
T ss_pred             CCCCCCcHHHHHHH
Confidence            98899999999985

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.32  E-value=7.3e-14  Score=101.11  Aligned_cols=79  Identities=23%  Similarity=0.355  Sum_probs=65.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++....... ......||+.|+|||++.+
T Consensus       119 ~i~~~l~~lH~~~i~H~dik------------p~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  186 (288)
T 3kfa_A          119 QISSAMEYLEKKNFIHRDLA------------ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY  186 (288)
T ss_dssp             HHHHHHHHHHHHTCCCSCCS------------GGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHCCccCCCCC------------cceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhcc
Confidence            34678889999999999999            6699999999999999999986653321 2233457888999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       187 ~~~~~~~Di~sl  198 (288)
T 3kfa_A          187 NKFSIKSDVWAF  198 (288)
T ss_dssp             CCCCHHHHHHHH
T ss_pred             CCCCchhhHHHH
Confidence            889999999985

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.32  E-value=4.5e-14  Score=104.19  Aligned_cols=78  Identities=32%  Similarity=0.509  Sum_probs=64.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.......   ......||..|+|||++.
T Consensus       136 i~~al~~lH~~~ivH~Dik------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  203 (327)
T 3lxl_A          136 ICKGMEYLGSRRCVHRDLA------------ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS  203 (327)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHH
T ss_pred             HHHHHHHHHhCCccCCCCC------------hhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhc
Confidence            3677889999999999999            6699999999999999999986643221   223356888899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       204 ~~~~~~~~Di~sl  216 (327)
T 3lxl_A          204 DNIFSRQSDVWSF  216 (327)
T ss_dssp             HCEEEHHHHHHHH
T ss_pred             cCCCChHHhHHHH
Confidence            8889999999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.32  E-value=1.4e-13  Score=99.30  Aligned_cols=77  Identities=29%  Similarity=0.483  Sum_probs=61.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC----CeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG----HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ...++.++|..+++|++++            ++||+++.++    .++++|||+++...... ......||+.|+|||++
T Consensus       117 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~  183 (283)
T 3bhy_A          117 ILDGVHYLHSKRIAHFDLK------------PENIMLLDKNVPNPRIKLIDFGIAHKIEAGN-EFKNIFGTPEFVAPEIV  183 (283)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEESCSSSSSCCEEECCCTTCEECC---------CCCGGGCCHHHH
T ss_pred             HHHHHHHHHhCCccCCCCC------------hHHEEEecCCCCCCceEEEecccceeccCCC-cccccCCCcCccCccee
Confidence            3677889999999999999            6699998776    79999999998664432 22345789999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       184 ~~~~~~~~~Di~sl  197 (283)
T 3bhy_A          184 NYEPLGLEADMWSI  197 (283)
T ss_dssp             TTCCCCTHHHHHHH
T ss_pred             cCCCCCcchhhhhH
Confidence            98889999999985

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.32  E-value=5.7e-14  Score=103.45  Aligned_cols=77  Identities=32%  Similarity=0.450  Sum_probs=63.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC-CCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++||+++ .++.++++|||+++.....  ......||+.|+|||++.+
T Consensus       157 qi~~~L~~LH~~~ivH~Dlk------------p~NIll~~~~~~~kL~Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~  222 (320)
T 3a99_A          157 QVLEAVRHCHNCGVLHRDIK------------DENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRY  222 (320)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEEETTTTEEEECCCTTCEECCSS--CBCCCCSCGGGSCHHHHHH
T ss_pred             HHHHHHHHHHHCCcEeCCCC------------HHHEEEeCCCCCEEEeeCccccccccc--cccCCCCCccCCChHHhcc
Confidence            34678889999999999999            6699998 6789999999999876543  2334579999999999987


Q ss_pred             CCC-CccceEecC
Q psy3254         166 IGY-DCVADMWSL  177 (177)
Q Consensus       166 ~~~-~~~~Diws~  177 (177)
                      ..+ +.++|||||
T Consensus       223 ~~~~~~~~Di~sl  235 (320)
T 3a99_A          223 HRYHGRSAAVWSL  235 (320)
T ss_dssp             SCBCHHHHHHHHH
T ss_pred             CCCCCccchHHhH
Confidence            655 678899985

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.32  E-value=6e-14  Score=103.24  Aligned_cols=78  Identities=29%  Similarity=0.530  Sum_probs=63.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.......   ......||..|+|||++.
T Consensus       143 l~~~l~~LH~~~ivH~Dik------------p~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  210 (318)
T 3lxp_A          143 ICEGMAYLHAQHYIHRDLA------------ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK  210 (318)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHH
T ss_pred             HHHHHHHHHhCCccCCCCc------------hheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhc
Confidence            3677889999999999999            6699999999999999999987654321   123356888999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       211 ~~~~~~~~Di~sl  223 (318)
T 3lxp_A          211 EYKFYYASDVWSF  223 (318)
T ss_dssp             HCEEEHHHHHHHH
T ss_pred             CCCCCcHHHHHHH
Confidence            8889999999985

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.32  E-value=1.4e-13  Score=99.55  Aligned_cols=75  Identities=32%  Similarity=0.485  Sum_probs=61.4

Q ss_pred             hHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeCCCCC-----eEEeeeecccccccccCCCcccccccccccc
Q psy3254          88 DFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLNTEGH-----AKLADFGVAGQLTDTMAKRNTVIGTPFWMAP  160 (177)
Q Consensus        88 ~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~~~~~-----~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aP  160 (177)
                      ...++.++|..+  ++|++++            ++||+++.++.     ++++|||+++....   ......||+.|+||
T Consensus       131 l~~~l~~lH~~~~~ivH~dik------------p~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~g~~~y~aP  195 (287)
T 4f0f_A          131 IALGIEYMQNQNPPIVHRDLR------------SPNIFLQSLDENAPVCAKVADFGLSQQSVH---SVSGLLGNFQWMAP  195 (287)
T ss_dssp             HHHHHHHHHTSSSCCBCSCCS------------GGGEEESCCCTTCSCCEEECCCTTCBCCSS---CEECCCCCCTTSCG
T ss_pred             HHHHHHHHHhCCCCeecCCCC------------cceEEEeccCCCCceeEEeCCCCccccccc---cccccCCCccccCc
Confidence            367888999999  9999999            66999987776     99999999975433   23346799999999


Q ss_pred             cccc--CCCCCccceEecC
Q psy3254         161 EVIQ--EIGYDCVADMWSL  177 (177)
Q Consensus       161 e~~~--~~~~~~~~Diws~  177 (177)
                      |++.  ...++.++||||+
T Consensus       196 E~~~~~~~~~~~~~Di~sl  214 (287)
T 4f0f_A          196 ETIGAEEESYTEKADTYSF  214 (287)
T ss_dssp             GGSSCSSCEECHHHHHHHH
T ss_pred             hhhccCCCCcCchhhHHHH
Confidence            9994  4567889999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.32  E-value=7.3e-14  Score=112.08  Aligned_cols=78  Identities=28%  Similarity=0.447  Sum_probs=61.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|+|++            |+||+++.++.++++|||+++....... ......||+.|+|||++.+.
T Consensus       500 i~~aL~~LH~~givHrDik------------p~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  567 (656)
T 2j0j_A          500 LSTALAYLESKRFVHRDIA------------ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR  567 (656)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHhCCccccccc------------hHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCC
Confidence            4677889999999999999            6699999999999999999987644321 12234577899999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       568 ~~~~~~DiwSl  578 (656)
T 2j0j_A          568 RFTSASDVWMF  578 (656)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCchhhHHHH
Confidence            89999999985

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=1.2e-13  Score=102.29  Aligned_cols=78  Identities=29%  Similarity=0.413  Sum_probs=58.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---Ccccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++........   .....+|..|+|||++.
T Consensus       156 i~~aL~~LH~~~ivH~Dik------------p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (333)
T 1mqb_A          156 IAAGMKYLANMNYVHRDLA------------ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS  223 (333)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHH
T ss_pred             HHHHHHHHHhCCeeCCCCC------------hheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcc
Confidence            3677889999999999999            66999999999999999999876432111   12234678899999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       224 ~~~~~~~~Di~sl  236 (333)
T 1mqb_A          224 YRKFTSASDVWSF  236 (333)
T ss_dssp             SCCCCHHHHHHHH
T ss_pred             cCCCCchhhhHHH
Confidence            8899999999985

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.31  E-value=2e-13  Score=106.49  Aligned_cols=76  Identities=29%  Similarity=0.566  Sum_probs=63.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC---CeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            |+||+++.++   .++++|||+++..... ......+||+.|+|||++.
T Consensus       155 i~~~l~~lH~~~ivH~Dlk------------p~Nil~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~  221 (504)
T 3q5i_A          155 ILSGICYLHKHNIVHRDIK------------PENILLENKNSLLNIKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLK  221 (504)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEESSTTCCSSEEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHHHCCeEeCCCc------------HHHEEEecCCCCccEEEEECCCCEEcCCC-CccccccCCcCCCCHHHhc
Confidence            3678889999999999999            6699998776   6999999999876543 2334567999999999987


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      + .|+.++||||+
T Consensus       222 ~-~~~~~~Diwsl  233 (504)
T 3q5i_A          222 K-KYNEKCDVWSC  233 (504)
T ss_dssp             T-CBCTHHHHHHH
T ss_pred             c-CCCchHHHHHH
Confidence            4 68999999985

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.31  E-value=1.7e-13  Score=100.03  Aligned_cols=77  Identities=29%  Similarity=0.421  Sum_probs=63.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.......  ......||+.|+|||++.+
T Consensus       142 i~~~l~~lH~~~i~H~dlk------------p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  209 (307)
T 2nru_A          142 AANGINFLHENHHIHRDIK------------SANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG  209 (307)
T ss_dssp             HHHHHHHHHHTTEECSCCC------------GGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHhcCCeecCCCC------------HHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC
Confidence            3577889999999999999            6699999999999999999986543211  1234579999999998865


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                       .++.++|||||
T Consensus       210 -~~~~~~Dv~sl  220 (307)
T 2nru_A          210 -EITPKSDIYSF  220 (307)
T ss_dssp             -EECTHHHHHHH
T ss_pred             -CCCccchhHHH
Confidence             57889999985

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.31  E-value=1.9e-13  Score=98.29  Aligned_cols=78  Identities=26%  Similarity=0.394  Sum_probs=63.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++......  ........||+.|+|||++.+
T Consensus       114 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (276)
T 2yex_A          114 LMAGVVYLHGIGITHRDIK------------PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR  181 (276)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTC
T ss_pred             HHHHHHHHHhCCeeccCCC------------hHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhc
Confidence            3678889999999999999            66999999999999999999765322  122344678999999999987


Q ss_pred             CCC-CccceEecC
Q psy3254         166 IGY-DCVADMWSL  177 (177)
Q Consensus       166 ~~~-~~~~Diws~  177 (177)
                      ..+ +.++|||||
T Consensus       182 ~~~~~~~~Di~sl  194 (276)
T 2yex_A          182 REFHAEPVDVWSC  194 (276)
T ss_dssp             SSBCHHHHHHHHH
T ss_pred             CCCCCCcchHHHH
Confidence            664 678999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.31  E-value=3.1e-13  Score=98.00  Aligned_cols=75  Identities=33%  Similarity=0.535  Sum_probs=61.8

Q ss_pred             hHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeC-CCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+  ++|++++            +.||+++ .++.++++|||++......  ......||+.|+|||++.
T Consensus       138 i~~~l~~lH~~~~~i~H~dik------------p~Nil~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~  203 (290)
T 1t4h_A          138 ILKGLQFLHTRTPPIIHRDLK------------CDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMYE  203 (290)
T ss_dssp             HHHHHHHHHTSSSCCCCSCCC------------GGGEEESSTTSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGGGGG
T ss_pred             HHHHHHHHHcCCCCEEECCCC------------HHHEEEECCCCCEEEeeCCCccccccc--ccccccCCcCcCCHHHHh
Confidence            367788999999  9999999            6699997 7889999999999754332  233457999999999887


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      + .++.++||||+
T Consensus       204 ~-~~~~~~Di~sl  215 (290)
T 1t4h_A          204 E-KYDESVDVYAF  215 (290)
T ss_dssp             T-CCCTHHHHHHH
T ss_pred             c-cCCCcchHHHH
Confidence            5 58999999985

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.30  E-value=1.1e-13  Score=99.70  Aligned_cols=75  Identities=29%  Similarity=0.545  Sum_probs=57.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.....   .....+++.|+|||++.+..
T Consensus       126 i~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~y~aPE~~~~~~  190 (278)
T 1byg_A          126 VCEAMEYLEGNNFVHRDLA------------ARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALREKK  190 (278)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEECTTSCEEECCCCC---------------CCTTTSCHHHHHHCC
T ss_pred             HHHHHHHHHhCCccccCCC------------cceEEEeCCCcEEEeecccccccccc---ccCCCccccccCHHHhCCCC
Confidence            3567889999999999999            66999999999999999998765432   22345788999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       191 ~~~~~Di~sl  200 (278)
T 1byg_A          191 FSTKSDVWSF  200 (278)
T ss_dssp             CCHHHHHHHH
T ss_pred             CCchhcHHHH
Confidence            9999999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.30  E-value=3.9e-14  Score=107.32  Aligned_cols=78  Identities=26%  Similarity=0.432  Sum_probs=63.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe----CCCCCeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL----NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|+|++            ++||++    +.++.++++|||+++...... .....+||+.|+|||+
T Consensus       120 qi~~aL~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~~~kL~DFG~a~~~~~~~-~~~~~~gt~~y~aPE~  186 (396)
T 4eut_A          120 DVVGGMNHLRENGIVHRNIK------------PGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVSLYGTEEYLHPDM  186 (396)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEEEECTTSCEEEEECCGGGCEECCCGG-GSSCSSSCCTTCCHHH
T ss_pred             HHHHHHHHHHHCCEEECCcC------------HHHEEEeecCCCceeEEEecCCCceEccCCC-ccccccCCccccCHHH
Confidence            34678889999999999999            669998    777789999999998765432 2334679999999999


Q ss_pred             ccC--------CCCCccceEecC
Q psy3254         163 IQE--------IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~--------~~~~~~~Diws~  177 (177)
                      +..        ..++.++|||||
T Consensus       187 ~~~~~~~~~~~~~~~~~~DiwSl  209 (396)
T 4eut_A          187 YERAVLRKDHQKKYGATVDLWSI  209 (396)
T ss_dssp             HHHHCC--CHHHHHHHHHHHHHH
T ss_pred             hhccccccccccCCCcHHHHHHH
Confidence            864        467889999985

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.30  E-value=9.5e-14  Score=100.13  Aligned_cols=78  Identities=29%  Similarity=0.398  Sum_probs=64.1

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++....... ......++..|+|||++.+.
T Consensus       118 i~~~l~~lH~~~i~H~dik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  185 (279)
T 1qpc_A          118 IAEGMAFIEERNYIHRDLR------------AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG  185 (279)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHC
T ss_pred             HHHHHHHHHHCCeeccCCC------------HhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccC
Confidence            3677889999999999999            6699999999999999999987643321 22234567889999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       186 ~~~~~~Di~sl  196 (279)
T 1qpc_A          186 TFTIKSDVWSF  196 (279)
T ss_dssp             EECHHHHHHHH
T ss_pred             CCCchhhhHHH
Confidence            89999999985

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.30  E-value=9.1e-13  Score=98.02  Aligned_cols=65  Identities=17%  Similarity=0.283  Sum_probs=58.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |+||++||.+.+..+++.+|..+..+..  +..+|+++++||.+||..||.+||++.|+++|+|+..
T Consensus       218 mltG~~PF~~~~~~~~~~~i~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          218 LCTLKHAFEAGSMKNLVLKIISGSFPPV--SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             HHHCCCCCCCcCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            6899999999999999999987765554  5678999999999999999999999999999999975

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.30  E-value=6.9e-14  Score=101.31  Aligned_cols=75  Identities=27%  Similarity=0.394  Sum_probs=62.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC--------eEEeeeecccccccccCCCcccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH--------AKLADFGVAGQLTDTMAKRNTVIGTPFWM  158 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~--------~~l~dfg~~~~~~~~~~~~~~~~g~~~y~  158 (177)
                      ....++.++|..+++|++++            ++||+++.++.        ++++|||+++.....    ....||..|+
T Consensus       121 qi~~~L~~LH~~~ivH~Dlk------------p~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~y~  184 (289)
T 4fvq_A          121 QLAAAMHFLEENTLIHGNVC------------AKNILLIREEDRKTGNPPFIKLSDPGISITVLPK----DILQERIPWV  184 (289)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH----HHHHHTTTTS
T ss_pred             HHHHHHHHHhhCCeECCCcC------------cceEEEecCCcccccccceeeeccCcccccccCc----cccCCcCccc
Confidence            34678889999999999999            66999988876        999999998754332    2356889999


Q ss_pred             ccccccC-CCCCccceEecC
Q psy3254         159 APEVIQE-IGYDCVADMWSL  177 (177)
Q Consensus       159 aPe~~~~-~~~~~~~Diws~  177 (177)
                      |||++.+ ..++.++|||||
T Consensus       185 aPE~~~~~~~~~~~~Diwsl  204 (289)
T 4fvq_A          185 PPECIENPKNLNLATDKWSF  204 (289)
T ss_dssp             CHHHHHCGGGCCHHHHHHHH
T ss_pred             CHHHhCCCCCCCchhHHHHH
Confidence            9999987 679999999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.30  E-value=2.2e-13  Score=98.04  Aligned_cols=77  Identities=31%  Similarity=0.475  Sum_probs=55.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++...... .......||+.|+|||++.+..
T Consensus       120 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~  186 (276)
T 2h6d_A          120 ILSAVDYCHRHMVVHRDLK------------PENVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRL  186 (276)
T ss_dssp             HHHHHHHHHHHCSSCCCCC------------GGGEEECTTSCEEECCCCGGGCCCC--------------CCTGGGTTSC
T ss_pred             HHHHHHHHHHCCCccCCCC------------hhhEEECCCCCEEEeecccccccCCC-cceecccCCccccCHHHHcCCC
Confidence            4677889999999999999            66999999999999999999865443 2233457899999999998766


Q ss_pred             C-CccceEecC
Q psy3254         168 Y-DCVADMWSL  177 (177)
Q Consensus       168 ~-~~~~Diws~  177 (177)
                      + +.++|||||
T Consensus       187 ~~~~~~Di~sl  197 (276)
T 2h6d_A          187 YAGPEVDIWSC  197 (276)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCCccchHHHH
Confidence            5 578999985

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.30  E-value=1.2e-13  Score=99.20  Aligned_cols=77  Identities=30%  Similarity=0.465  Sum_probs=57.0

Q ss_pred             chHHHHhhhchhh---HHHHHhhhchHHHHHHHHhhcceEeCC--------CCCeEEeeeecccccccccCCCccccccc
Q psy3254          87 CDFEFLKFLSYDD---LQHRMANLDCEMEREIEQLRRNILLNT--------EGHAKLADFGVAGQLTDTMAKRNTVIGTP  155 (177)
Q Consensus        87 ~~~~~l~~l~~~~---~~~~~~~~~~~~~~~i~~l~~nil~~~--------~~~~~l~dfg~~~~~~~~~~~~~~~~g~~  155 (177)
                      ....++.++|..+   ++|++++            ++||+++.        ++.++++|||+++......  .....||+
T Consensus       113 ~l~~~l~~lH~~~~~~i~H~dik------------p~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~  178 (271)
T 3dtc_A          113 QIARGMNYLHDEAIVPIIHRDLK------------SSNILILQKVENGDLSNKILKITDFGLAREWHRTT--KMSAAGAY  178 (271)
T ss_dssp             HHHHHHHHHHHSSSSCCCCSCCS------------GGGEEESSCCSSSCCSSCCEEECCCCC---------------CCG
T ss_pred             HHHHHHHHHHhCCCCceeecCCc------------hHHEEEecccccccccCcceEEccCCccccccccc--ccCCCCcc
Confidence            3467888999999   8899999            66999985        6789999999998654432  22457899


Q ss_pred             cccccccccCCCCCccceEecC
Q psy3254         156 FWMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       156 ~y~aPe~~~~~~~~~~~Diws~  177 (177)
                      .|+|||++.+..++.++|||||
T Consensus       179 ~y~aPE~~~~~~~~~~~Di~sl  200 (271)
T 3dtc_A          179 AWMAPEVIRASMFSKGSDVWSY  200 (271)
T ss_dssp             GGSCHHHHHHCCCSHHHHHHHH
T ss_pred             ceeCHHHhccCCCCchhhHHHH
Confidence            9999999988889999999985

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.30  E-value=8.4e-14  Score=103.13  Aligned_cols=78  Identities=28%  Similarity=0.379  Sum_probs=61.9

Q ss_pred             hHHHHhhhc--------hhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCccccccc
Q psy3254          88 DFEFLKFLS--------YDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTP  155 (177)
Q Consensus        88 ~~~~l~~l~--------~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~  155 (177)
                      ...++.++|        ..+++|++++            ++||+++.++.++++|||+++.......    ......||+
T Consensus       148 i~~~l~~lH~~~~~~~~~~~ivH~Dlk------------p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~  215 (342)
T 1b6c_B          148 TASGLAHLHMEIVGTQGKPAIAHRDLK------------SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK  215 (342)
T ss_dssp             HHHHHHHHHCCBCSTTCBCEEECSCCS------------GGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCG
T ss_pred             HHHHHHHHHHHHhhhcccCCeeeCCCC------------HHHEEECCCCCEEEEECCCceeccccccccccccccCCcCc
Confidence            357788999        8899999999            6699999999999999999976543321    223457999


Q ss_pred             cccccccccCCC------CCccceEecC
Q psy3254         156 FWMAPEVIQEIG------YDCVADMWSL  177 (177)
Q Consensus       156 ~y~aPe~~~~~~------~~~~~Diws~  177 (177)
                      .|+|||++.+..      ++.++|||||
T Consensus       216 ~y~aPE~~~~~~~~~~~~~~~~~Di~sl  243 (342)
T 1b6c_B          216 RYMAPEVLDDSINMKHFESFKRADIYAM  243 (342)
T ss_dssp             GGCCHHHHTSCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCHhhhcccccccccccCCcccHHHH
Confidence            999999997652      3368999985

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.29  E-value=6.6e-14  Score=103.30  Aligned_cols=77  Identities=30%  Similarity=0.362  Sum_probs=62.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            |+||+++.++.++++|||+++..... .......+++.|+|||++.+..
T Consensus       151 i~~aL~~LH~~~ivH~dlk------------p~NIl~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~  217 (327)
T 1fvr_A          151 VARGMDYLSQKQFIHRDLA------------ARNILVGENYVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSV  217 (327)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECGGGCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCE
T ss_pred             HHHHHHHHHhCCccCCCCc------------cceEEEcCCCeEEEcccCcCcccccc-ccccCCCCCccccChhhhcccc
Confidence            4678889999999999999            66999999999999999999754322 1223345788999999998888


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       218 ~~~~~Di~sl  227 (327)
T 1fvr_A          218 YTTNSDVWSY  227 (327)
T ss_dssp             ECHHHHHHHH
T ss_pred             CCchhcchHH
Confidence            9999999985

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.29  E-value=2.2e-13  Score=98.68  Aligned_cols=76  Identities=26%  Similarity=0.487  Sum_probs=57.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEe---CCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILL---NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            +.||++   +.++.++++|||+++..... .......||+.|+|||++.
T Consensus       133 i~~~L~~LH~~~ivH~dik------------p~NIl~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~  199 (285)
T 3is5_A          133 MMNALAYFHSQHVVHKDLK------------PENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVFK  199 (285)
T ss_dssp             HHHHHHHHHHTTCCCCCCS------------GGGEEESSSSTTCCEEECCCCCCCC-----------CTTGGGCCHHHHT
T ss_pred             HHHHHHHHHhCCEEECCCC------------HHHEEEecCCCCCCEEEEeeecceecCCc-ccCcCcccccCcCChHHhc
Confidence            3678889999999999999            669999   45678999999999765443 2234467999999999986


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                       ..++.++|||||
T Consensus       200 -~~~~~~~Di~sl  211 (285)
T 3is5_A          200 -RDVTFKCDIWSA  211 (285)
T ss_dssp             -TCCCHHHHHHHH
T ss_pred             -cCCCcccCeehH
Confidence             468899999985

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.29  E-value=1.1e-12  Score=95.42  Aligned_cols=66  Identities=26%  Similarity=0.448  Sum_probs=50.9

Q ss_pred             CccCCCCCCCCCHH-HHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |+||++||.+.+.. .++..+..+..+ ...+...++++++||.+||..||.+|||+.++++|||++.
T Consensus       222 lltg~~Pf~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          222 MATSEYPYSECQNAAQIYRRVTSGVKP-ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHSSCTTTTCSSHHHHHHHHTTTCCC-GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHCCCCCCCCCcHHHHHHHHHcCCCC-CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            68999999876544 444455444322 2225567899999999999999999999999999999975

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.29  E-value=1.1e-13  Score=99.05  Aligned_cols=78  Identities=26%  Similarity=0.374  Sum_probs=64.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++...... .......|+..|+|||++.+.
T Consensus       113 i~~~l~~lH~~~i~H~dl~------------p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  180 (267)
T 3t9t_A          113 VCEGMAYLEEACVIHRDLA------------ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS  180 (267)
T ss_dssp             HHHHHHHHHHTTCCCSSCC------------GGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHC
T ss_pred             HHHHHHHHHhCCcccCCCc------------hheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCC
Confidence            3677889999999999999            669999999999999999998654321 122234577889999999888


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       181 ~~~~~~Di~sl  191 (267)
T 3t9t_A          181 RYSSKSDVWSF  191 (267)
T ss_dssp             CCCHHHHHHHH
T ss_pred             Cccchhchhhh
Confidence            89999999985

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=1e-13  Score=100.48  Aligned_cols=79  Identities=29%  Similarity=0.399  Sum_probs=64.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.......   ......||+.|+|||++
T Consensus       118 qi~~~l~~lH~~~i~H~dlk------------p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  185 (287)
T 1u59_A          118 QVSMGMKYLEEKNFVHRDLA------------ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI  185 (287)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH
T ss_pred             HHHHHHHHHHHCCEeeCCCc------------hheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHh
Confidence            34678889999999999999            6699999999999999999987643211   12234578899999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       186 ~~~~~~~~~Di~sl  199 (287)
T 1u59_A          186 NFRKFSSRSDVWSY  199 (287)
T ss_dssp             HHCEECHHHHHHHH
T ss_pred             ccCCCCchhhHHHH
Confidence            88889999999985

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.28  E-value=7.4e-14  Score=101.17  Aligned_cols=77  Identities=26%  Similarity=0.419  Sum_probs=61.3

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccccC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~~  165 (177)
                      ..++.++|..+++|++++            ++||+++.++.++++|||+++.......   ......+|..|+|||++.+
T Consensus       131 ~~~l~~lH~~~i~H~dik------------p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (291)
T 1u46_A          131 AEGMGYLESKRFIHRDLA------------ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT  198 (291)
T ss_dssp             HHHHHHHHHTTEECSCCC------------GGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHH
T ss_pred             HHHHHHHHhCCcccCCCc------------hheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcC
Confidence            567889999999999999            6699999999999999999987643321   1223457888999999988


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++|||||
T Consensus       199 ~~~~~~~Di~sl  210 (291)
T 1u46_A          199 RTFSHASDTWMF  210 (291)
T ss_dssp             CEEEHHHHHHHH
T ss_pred             CCCCchhhHHHH
Confidence            888999999985

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.28  E-value=3.5e-13  Score=97.97  Aligned_cols=77  Identities=39%  Similarity=0.579  Sum_probs=63.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc---
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ---  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~---  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||++...... .......|++.|+|||++.   
T Consensus       133 i~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~  199 (298)
T 1phk_A          133 LLEVICALHKLNIVHRDLK------------PENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIECSM  199 (298)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHH
T ss_pred             HHHHHHHHHHCCcccCCCC------------cceEEEcCCCcEEEecccchhhcCCC-cccccccCCccccCHHHhcccc
Confidence            3677889999999999999            66999999999999999999866543 2334467899999999985   


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         ...++.++|||||
T Consensus       200 ~~~~~~~~~~~Di~sl  215 (298)
T 1phk_A          200 NDNHPGYGKEVDMWST  215 (298)
T ss_dssp             CTTSCCBCTHHHHHHH
T ss_pred             ccccccCCcccccHhH
Confidence               4468889999985

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.28  E-value=1e-13  Score=102.78  Aligned_cols=76  Identities=36%  Similarity=0.559  Sum_probs=46.8

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.   ++.++++|||+++.....  .....+||+.|+|||++.
T Consensus       137 l~~~l~~LH~~~ivH~dlk------------p~NIll~~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~  202 (336)
T 3fhr_A          137 IGTAIQFLHSHNIAHRDVK------------PENLLYTSKEKDAVLKLTDFGFAKETTQN--ALQTPCYTPYYVAPEVLG  202 (336)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEESCSSTTCCEEECCCTTCEEC-----------------------
T ss_pred             HHHHHHHHHhCCeecCCCC------------HHHEEEEecCCCceEEEeccccceecccc--ccccCCCCcCccChhhhC
Confidence            4678889999999999999            66999976   445999999999865432  233467899999999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       203 ~~~~~~~~Di~sl  215 (336)
T 3fhr_A          203 PEKYDKSCDMWSL  215 (336)
T ss_dssp             -CHHHHHHHHHHH
T ss_pred             CCCCCchhhHHHH
Confidence            8889999999985

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.28  E-value=2.7e-13  Score=97.88  Aligned_cols=75  Identities=23%  Similarity=0.243  Sum_probs=60.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-------------------CCeEEeeeecccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-------------------GHAKLADFGVAGQLTDTMAK  147 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-------------------~~~~l~dfg~~~~~~~~~~~  147 (177)
                      ....++.++|..+++|++++            |+||+++.+                   ..++++|||++......   
T Consensus       123 qi~~al~~lH~~~ivH~Dik------------p~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---  187 (289)
T 1x8b_A          123 QVGRGLRYIHSMSLVHMDIK------------PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP---  187 (289)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEEC--------------------CCCEEECCCTTCEETTCS---
T ss_pred             HHHHHHHHHHhCCEeecCCC------------HHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---
Confidence            34678889999999999999            669999844                   47999999999875443   


Q ss_pred             CccccccccccccccccCC-CCCccceEecC
Q psy3254         148 RNTVIGTPFWMAPEVIQEI-GYDCVADMWSL  177 (177)
Q Consensus       148 ~~~~~g~~~y~aPe~~~~~-~~~~~~Diws~  177 (177)
                       ....||+.|+|||++.+. .++.++|||||
T Consensus       188 -~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl  217 (289)
T 1x8b_A          188 -QVEEGDSRFLANEVLQENYTHLPKADIFAL  217 (289)
T ss_dssp             -CCCCCCGGGCCHHHHTTCCTTHHHHHHHHH
T ss_pred             -cccCCCccccChhHhcCCCCCCchhhHHHH
Confidence             234689999999999875 56689999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.27  E-value=1.8e-12  Score=94.82  Aligned_cols=66  Identities=21%  Similarity=0.365  Sum_probs=57.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~~   69 (177)
                      |+||++||.+.+..+++.+|.+..   +..|..+|++++|||.+||..||.+|++     ++|+++||||+...
T Consensus       219 mltG~~PF~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          219 MLTGTLPFQGKDRKETMTMILKAK---LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             HHhCCCCCCCcCHHHHHHHHHcCC---CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence            689999999999999998887663   2336778999999999999999999998     58999999998654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.27  E-value=1.6e-13  Score=101.09  Aligned_cols=78  Identities=33%  Similarity=0.583  Sum_probs=62.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC---eEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            ++||+++.++.   ++++|||+++..... .......||+.|+|||++
T Consensus       122 qi~~~l~~lH~~~ivH~dlk------------p~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~gt~~y~aPE~~  188 (322)
T 2ycf_A          122 QMLLAVQYLHENGIIHRDLK------------PENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL  188 (322)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEESSSSSSCCEEECCCTTCEECCCC-HHHHHHHSCCTTCCHHHH
T ss_pred             HHHHHHHHHHHCCeeccCCC------------HHHEEEecCCCCCeEEEccCccceecccc-cccccccCCcCccCchhh
Confidence            34678889999999999999            66999987654   999999999865432 122345789999999997


Q ss_pred             c---CCCCCccceEecC
Q psy3254         164 Q---EIGYDCVADMWSL  177 (177)
Q Consensus       164 ~---~~~~~~~~Diws~  177 (177)
                      .   ...++.++|||||
T Consensus       189 ~~~~~~~~~~~~Di~sl  205 (322)
T 2ycf_A          189 VSVGTAGYNRAVDCWSL  205 (322)
T ss_dssp             HHTTTTTCTTHHHHHHH
T ss_pred             ccCCCCCCCchhhHHHH
Confidence            4   4578899999985

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.27  E-value=1.6e-13  Score=99.91  Aligned_cols=79  Identities=43%  Similarity=0.733  Sum_probs=60.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-----CCCccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-----AKRNTVIGTPFWMAPE  161 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~g~~~y~aPe  161 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++......     .......||+.|+|||
T Consensus       129 qi~~~l~~lH~~~i~H~dl~------------p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  196 (303)
T 2vwi_A          129 EVLEGLEYLHKNGQIHRDVK------------AGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE  196 (303)
T ss_dssp             HHHHHHHHHHHTTCCCCCCS------------GGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHH
T ss_pred             HHHHHHHHHHhCCCCCCCCC------------hhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHH
Confidence            34678889999999999999            669999999999999999997654321     1123457999999999


Q ss_pred             cccC-CCCCccceEecC
Q psy3254         162 VIQE-IGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~-~~~~~~~Diws~  177 (177)
                      ++.+ ..++.++|||||
T Consensus       197 ~~~~~~~~~~~~Di~sl  213 (303)
T 2vwi_A          197 VMEQVRGYDFKADIWSF  213 (303)
T ss_dssp             HHHHHHCCCTHHHHHHH
T ss_pred             HhccccCCCchhhHHHH
Confidence            9875 568999999985

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.27  E-value=2.8e-13  Score=99.28  Aligned_cols=77  Identities=39%  Similarity=0.659  Sum_probs=54.3

Q ss_pred             hHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          88 DFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        88 ~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      ...++.++|.. +++|++++            ++||+++.++.++++|||+++..... .......||+.|+|||++.  
T Consensus       133 i~~~l~~lH~~~~i~H~dlk------------p~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~  199 (318)
T 2dyl_A          133 IVKALYYLKEKHGVIHRDVK------------PSNILLDERGQIKLCDFGISGRLVDD-KAKDRSAGCAAYMAPERIDPP  199 (318)
T ss_dssp             HHHHHHHHHHHHCCCCCCCC------------GGGEEECTTSCEEECCCTTC---------------CCTTCCHHHHC--
T ss_pred             HHHHHHHHHhhCCEEeCCCC------------HHHEEECCCCCEEEEECCCchhccCC-ccccccCCCccccChhhcccc
Confidence            36778899985 99999999            66999999999999999999765433 2233457899999999994  


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         ...++.++|||||
T Consensus       200 ~~~~~~~~~~~Di~sl  215 (318)
T 2dyl_A          200 DPTKPDYDIRADVWSL  215 (318)
T ss_dssp             ------CCTHHHHHHH
T ss_pred             cccccCCccccchhhH
Confidence               4568899999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.27  E-value=1.3e-13  Score=101.18  Aligned_cols=78  Identities=31%  Similarity=0.450  Sum_probs=58.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC---eEEeeeeccccccccc-------CCCccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH---AKLADFGVAGQLTDTM-------AKRNTVIGTPFW  157 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~---~~l~dfg~~~~~~~~~-------~~~~~~~g~~~y  157 (177)
                      ...++.++|..+++|++++            ++||+++.++.   ++++|||+++......       ......+||+.|
T Consensus       120 i~~~l~~lH~~~ivH~dlk------------p~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y  187 (316)
T 2ac3_A          120 VASALDFLHNKGIAHRDLK------------PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY  187 (316)
T ss_dssp             HHHHHHHHHHTTCCCCCCC------------GGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGG
T ss_pred             HHHHHHHHHhCCceeCCCC------------HHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCc
Confidence            4678889999999999999            66999987765   9999999987653211       112235699999


Q ss_pred             cccccccC-----CCCCccceEecC
Q psy3254         158 MAPEVIQE-----IGYDCVADMWSL  177 (177)
Q Consensus       158 ~aPe~~~~-----~~~~~~~Diws~  177 (177)
                      +|||++..     ..++.++|||||
T Consensus       188 ~aPE~~~~~~~~~~~~~~~~Diwsl  212 (316)
T 2ac3_A          188 MAPEVVEAFSEEASIYDKRCDLWSL  212 (316)
T ss_dssp             CCHHHHHHTSHHHHHHTTTHHHHHH
T ss_pred             cChHHhhcccccccCCCcccccHhH
Confidence            99999974     458899999985

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.26  E-value=1.9e-13  Score=100.79  Aligned_cols=79  Identities=28%  Similarity=0.365  Sum_probs=62.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeeccccccccc--CCCccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPE  161 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe  161 (177)
                      ....++.++|..+++|++++            +.||+++.   +..++++|||+++......  .......||+.|+|||
T Consensus       148 qi~~al~~LH~~~i~H~dlk------------p~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  215 (327)
T 2yfx_A          148 DIACGCQYLEENHFIHRDIA------------ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE  215 (327)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHH
T ss_pred             HHHHHHHHHhhCCeecCcCC------------HhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHh
Confidence            34678889999999999999            66999984   4469999999997543221  1233456889999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      ++.+..++.++|||||
T Consensus       216 ~~~~~~~~~~~Di~sl  231 (327)
T 2yfx_A          216 AFMEGIFTSKTDTWSF  231 (327)
T ss_dssp             HHHHCCCCHHHHHHHH
T ss_pred             HhcCCCCCchhhHHHH
Confidence            9988889999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.26  E-value=3.6e-13  Score=108.54  Aligned_cols=72  Identities=25%  Similarity=0.391  Sum_probs=60.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ..+++.++|..+++|+|++            |+||+++.+ .++++|||+++.....    ...+||+.|+|||++.+. 
T Consensus       191 i~~aL~~lH~~giiHrDlk------------p~NIll~~~-~~kl~DFG~a~~~~~~----~~~~gt~~y~aPE~~~~~-  252 (681)
T 2pzi_A          191 ILPALSYLHSIGLVYNDLK------------PENIMLTEE-QLKLIDLGAVSRINSF----GYLYGTPGFQAPEIVRTG-  252 (681)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECSS-CEEECCCTTCEETTCC----SCCCCCTTTSCTTHHHHC-
T ss_pred             HHHHHHHHHHCCCeecccC------------hHHeEEeCC-cEEEEecccchhcccC----CccCCCccccCHHHHcCC-
Confidence            3678889999999999999            669999875 8999999999875433    456799999999998764 


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++|||||
T Consensus       253 ~~~~sDi~sl  262 (681)
T 2pzi_A          253 PTVATDIYTV  262 (681)
T ss_dssp             SCHHHHHHHH
T ss_pred             CCCceehhhh
Confidence            4889999985

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.26  E-value=3.5e-13  Score=98.76  Aligned_cols=79  Identities=22%  Similarity=0.384  Sum_probs=61.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC-CCCCeEEeeeeccccccccc---CCCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN-TEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~-~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|++++            ++||+++ .++.++++|||+++......   .......||..|+|||+
T Consensus       128 qi~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  195 (320)
T 2i6l_A          128 QLLRGLKYIHSANVLHRDLK------------PANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL  195 (320)
T ss_dssp             HHHHHHHHHHHTTCBCCCCS------------GGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHH
T ss_pred             HHHHHHHHHHhCCEecCCCC------------HHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHH
Confidence            34678889999999999999            6699997 56689999999998654321   12234567999999998


Q ss_pred             ccC-CCCCccceEecC
Q psy3254         163 IQE-IGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~-~~~~~~~Diws~  177 (177)
                      +.. ..++.++|||||
T Consensus       196 ~~~~~~~~~~~Di~sl  211 (320)
T 2i6l_A          196 LLSPNNYTKAIDMWAA  211 (320)
T ss_dssp             HHCTTCCCHHHHHHHH
T ss_pred             hcCcccCCchhhhHhH
Confidence            875 678999999985

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.26  E-value=1.2e-13  Score=100.29  Aligned_cols=79  Identities=29%  Similarity=0.420  Sum_probs=63.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++.......   ......|++.|+|||++
T Consensus       125 qi~~~l~~LH~~~i~H~dik------------p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  192 (291)
T 1xbb_A          125 QVSMGMKYLEESNFVHRDLA------------ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI  192 (291)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH
T ss_pred             HHHHHHHHHHhCCeEcCCCC------------cceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHh
Confidence            34678889999999999999            6699999999999999999986643321   11223467889999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..++.++|||||
T Consensus       193 ~~~~~~~~~Di~sl  206 (291)
T 1xbb_A          193 NYYKFSSKSDVWSF  206 (291)
T ss_dssp             HHCEEEHHHHHHHH
T ss_pred             ccCCCChhhhHHHH
Confidence            88888999999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.25  E-value=1.5e-13  Score=101.35  Aligned_cols=78  Identities=28%  Similarity=0.524  Sum_probs=64.2

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.++++|||+++.......   ......++..|+|||++.
T Consensus       154 i~~aL~~LH~~~ivH~dik------------p~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  221 (326)
T 2w1i_A          154 ICKGMEYLGTKRYIHRDLA------------TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT  221 (326)
T ss_dssp             HHHHHHHHHHTTEECSCCC------------GGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHH
T ss_pred             HHHHHHHHHhCCEeccCCC------------cceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhc
Confidence            4677889999999999999            6699999999999999999987644321   122345778899999998


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       222 ~~~~~~~~Di~sl  234 (326)
T 2w1i_A          222 ESKFSVASDVWSF  234 (326)
T ss_dssp             HCEEEHHHHHHHH
T ss_pred             CCCCCchhhHHHH
Confidence            8888999999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.25  E-value=4.2e-13  Score=99.64  Aligned_cols=76  Identities=30%  Similarity=0.548  Sum_probs=63.6

Q ss_pred             hHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|. .+++|++++            ++||+++.++.++++|||+++.....  ......||..|+|||++.+.
T Consensus       160 i~~~l~~lH~~~~i~H~dl~------------p~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  225 (348)
T 2pml_X          160 VLNSFSYIHNEKNICHRDVK------------PSNILMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNE  225 (348)
T ss_dssp             HHHHHHHHHHTSCEECCCCC------------GGGEEECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSC
T ss_pred             HHHHHHHHhccCCEeecCCC------------hHhEEEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCC
Confidence            4677889998 999999999            66999999999999999999865433  23346789999999999876


Q ss_pred             -CCCc-cceEecC
Q psy3254         167 -GYDC-VADMWSL  177 (177)
Q Consensus       167 -~~~~-~~Diws~  177 (177)
                       .++. ++|||||
T Consensus       226 ~~~~~~~~Di~sl  238 (348)
T 2pml_X          226 SSYNGAKVDIWSL  238 (348)
T ss_dssp             CCEEHHHHHHHHH
T ss_pred             CCCCcchhhHHHH
Confidence             6666 8999985

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.25  E-value=3.3e-13  Score=98.90  Aligned_cols=78  Identities=28%  Similarity=0.482  Sum_probs=57.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ...+++.++|..+++|++++            ++||+++ ++.++++|||+++.......  ......||+.|+|||++.
T Consensus       135 qi~~aL~~LH~~~ivH~dlk------------p~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  201 (313)
T 3cek_A          135 NMLEAVHTIHQHGIVHSDLK------------PANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK  201 (313)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHCCceecCCC------------cccEEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHh
Confidence            34678889999999999999            6699996 48899999999986643321  123457999999999987


Q ss_pred             C-----------CCCCccceEecC
Q psy3254         165 E-----------IGYDCVADMWSL  177 (177)
Q Consensus       165 ~-----------~~~~~~~Diws~  177 (177)
                      +           ..++.++|||||
T Consensus       202 ~~~~~~~~~~~~~~~~~~~Di~sl  225 (313)
T 3cek_A          202 DMSSSRENGKSKSKISPKSDVWSL  225 (313)
T ss_dssp             TCC----------CCCHHHHHHHH
T ss_pred             hcccccccccccccCCchHHHHHH
Confidence            5           468889999985

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.25  E-value=5.9e-13  Score=97.09  Aligned_cols=79  Identities=27%  Similarity=0.427  Sum_probs=63.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||++.......  .......||+.|+|||++.
T Consensus       117 qi~~al~~LH~~~i~H~dlk------------p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (305)
T 2wtk_C          117 QLIDGLEYLHSQGIVHKDIK------------PGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIAN  184 (305)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHCCeeecCCC------------cccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhcc
Confidence            34678889999999999999            669999999999999999998654321  1223456899999999997


Q ss_pred             CCC--CCccceEecC
Q psy3254         165 EIG--YDCVADMWSL  177 (177)
Q Consensus       165 ~~~--~~~~~Diws~  177 (177)
                      +..  ++.++|||||
T Consensus       185 ~~~~~~~~~~Di~sl  199 (305)
T 2wtk_C          185 GLDTFSGFKVDIWSA  199 (305)
T ss_dssp             CCSCEESHHHHHHHH
T ss_pred             CcccCCcchhhHHHH
Confidence            643  4778999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.24  E-value=1.4e-12  Score=104.31  Aligned_cols=77  Identities=27%  Similarity=0.477  Sum_probs=64.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCC---eEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGH---AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.++.   ++++|||+++..... .......||+.|+|||++.
T Consensus       130 Ll~aL~yLHs~gIVHrDLK------------P~NILl~~~g~~~~vKL~DFG~a~~~~~~-~~~~~~~gt~~Y~APE~l~  196 (676)
T 3qa8_A          130 ISSALRYLHENRIIHRDLK------------PENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPELLE  196 (676)
T ss_dssp             HHHHHHHHHHTTBCCCCCC------------STTEEEECCSSSCEEEECSCCCCCBTTSC-CCCCCCCSCCTTCSSCSSC
T ss_pred             HHHHHHHHHHCCCccCCCC------------HHHeEeecCCCceeEEEcccccccccccc-cccccccCCcccCChHHhc
Confidence            3678889999999999999            66999987664   899999999876543 2334567999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..++.++|||||
T Consensus       197 ~~~~s~ksDIwSL  209 (676)
T 3qa8_A          197 QKKYTVTVDYWSF  209 (676)
T ss_dssp             CSCCSTTHHHHHH
T ss_pred             cCCCCchhHHHHH
Confidence            8899999999985

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.23  E-value=5.9e-13  Score=97.65  Aligned_cols=79  Identities=28%  Similarity=0.294  Sum_probs=62.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC---------Cccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK---------RNTVIGTPFW  157 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~---------~~~~~g~~~y  157 (177)
                      ....++.++|..+++|++++            ++||+++.++.++++|||+++........         .....||+.|
T Consensus       142 qi~~~L~~LH~~~ivH~dlk------------p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  209 (317)
T 2buj_A          142 GICRGLEAIHAKGYAHRDLK------------PTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY  209 (317)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGG
T ss_pred             HHHHHHHHHHhCCcccCCCC------------HHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCccc
Confidence            34678889999999999999            66999999999999999998754321110         1234579999


Q ss_pred             cccccccCCC---CCccceEecC
Q psy3254         158 MAPEVIQEIG---YDCVADMWSL  177 (177)
Q Consensus       158 ~aPe~~~~~~---~~~~~Diws~  177 (177)
                      +|||++.+..   ++.++|||||
T Consensus       210 ~aPE~~~~~~~~~~~~~~Di~sl  232 (317)
T 2buj_A          210 RAPELFSVQSHCVIDERTDVWSL  232 (317)
T ss_dssp             CCGGGSSCCSEEEECTHHHHHHH
T ss_pred             CCHhHhccCCCcCCCchhhHHHH
Confidence            9999997543   7889999985

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.22  E-value=5.3e-13  Score=97.75  Aligned_cols=76  Identities=32%  Similarity=0.456  Sum_probs=62.3

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC-CCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|++++            +.||+++ .++.++++|||+++.....  ......||..|+|||++.+.
T Consensus       148 i~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~  213 (312)
T 2iwi_A          148 VVAAIQHCHSRGVVHRDIK------------DENILIDLRRGCAKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRH  213 (312)
T ss_dssp             HHHHHHHHHHHTEECCCCS------------GGGEEEETTTTEEEECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHS
T ss_pred             HHHHHHHHHHCCeeecCCC------------hhhEEEeCCCCeEEEEEcchhhhcccC--cccccCCcccccCceeeecC
Confidence            3677889999999999999            6699998 7889999999999876543  23345799999999999766


Q ss_pred             CC-CccceEecC
Q psy3254         167 GY-DCVADMWSL  177 (177)
Q Consensus       167 ~~-~~~~Diws~  177 (177)
                      .+ +.++|||||
T Consensus       214 ~~~~~~~Di~sl  225 (312)
T 2iwi_A          214 QYHALPATVWSL  225 (312)
T ss_dssp             CBCHHHHHHHHH
T ss_pred             CCCCccchHHHH
Confidence            65 458999985

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.20  E-value=1e-12  Score=96.37  Aligned_cols=78  Identities=19%  Similarity=0.323  Sum_probs=57.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc-----cCCCccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT-----MAKRNTVIGTPFWMAPE  161 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~g~~~y~aPe  161 (177)
                      ....++.++|..+++|++++            ++||+++ ++.++++|||+++.....     ........||+.|+|||
T Consensus       138 qi~~al~~lH~~~i~H~dlk------------p~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE  204 (319)
T 2y4i_B          138 EIVKGMGYLHAKGILHKDLK------------SKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE  204 (319)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------STTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHH
T ss_pred             HHHHHHHHHHhCCccccCCC------------hhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChH
Confidence            34678889999999999999            6699998 679999999998754321     11223356899999999


Q ss_pred             cccC---------CCCCccceEecC
Q psy3254         162 VIQE---------IGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~---------~~~~~~~Diws~  177 (177)
                      ++..         ..++.++|||||
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~Di~sl  229 (319)
T 2y4i_B          205 IIRQLSPDTEEDKLPFSKHSDVFAL  229 (319)
T ss_dssp             HHSCBSCC--CCCSCCCHHHHHHHH
T ss_pred             HhhhccccccccccCCCchhhHHHH
Confidence            9974         357889999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.17  E-value=1.8e-12  Score=93.87  Aligned_cols=76  Identities=32%  Similarity=0.601  Sum_probs=61.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC---CCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|++++            ++||+++.+   +.++++|||+++..... .......||+.|+|||++.
T Consensus       130 i~~~l~~LH~~~i~H~dl~------------p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~  196 (287)
T 2wei_A          130 VFSGITYMHKHNIVHRDLK------------PENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVLR  196 (287)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEESCSSTTCCEEECSTTGGGTBCCC-SSCSCHHHHHTTCCHHHHT
T ss_pred             HHHHHHHHHHCCeeccCCC------------hhhEEEecCCCcccEEEeccCcceeecCC-CccccccCcccccChHHhc
Confidence            3677889999999999999            669999654   46999999999865443 2233456899999999987


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      + .++.++|||||
T Consensus       197 ~-~~~~~~Di~sl  208 (287)
T 2wei_A          197 G-TYDEKCDVWSA  208 (287)
T ss_dssp             T-CCCTHHHHHHH
T ss_pred             C-CCCCchhhHhH
Confidence            6 48899999985

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.16  E-value=2.7e-12  Score=91.83  Aligned_cols=73  Identities=25%  Similarity=0.404  Sum_probs=59.3

Q ss_pred             hHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+  ++|++++            ++||+++.++.++++|||++.....     ....||+.|+|||++.+
T Consensus       120 i~~~l~~lH~~~~~i~H~dik------------p~Nil~~~~~~~~l~~~~~~~~~~~-----~~~~~t~~y~aPE~~~~  182 (271)
T 3kmu_A          120 MARGMAFLHTLEPLIPRHALN------------SRSVMIDEDMTARISMADVKFSFQS-----PGRMYAPAWVAPEALQK  182 (271)
T ss_dssp             HHHHHHHHTTSSSCCTTCCCS------------GGGEEECTTSCEEEEGGGSCCTTSC-----TTCBSCGGGSCHHHHHS
T ss_pred             HHHHHHHHhcCCCceecCCCc------------cceEEEcCCcceeEEeccceeeecc-----cCccCCccccChhhhcc
Confidence            467888999999  9999999            6699999999999999887754322     23578999999999987


Q ss_pred             CCCCc---cceEecC
Q psy3254         166 IGYDC---VADMWSL  177 (177)
Q Consensus       166 ~~~~~---~~Diws~  177 (177)
                      ..++.   ++|||||
T Consensus       183 ~~~~~~~~~~Di~sl  197 (271)
T 3kmu_A          183 KPEDTNRRSADMWSF  197 (271)
T ss_dssp             CGGGSCHHHHHHHHH
T ss_pred             CCCCCCCchhhHHHH
Confidence            55444   7999985

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.12  E-value=9.7e-12  Score=92.04  Aligned_cols=67  Identities=25%  Similarity=0.357  Sum_probs=55.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhh-------------hcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM-------------LNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~-------------l~h~~~~~   67 (177)
                      |+||++||.+.+..+++.+|....++....|+.+|+++++||.+||..||.+|||+.|+             +.|||+..
T Consensus       249 mltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~  328 (336)
T 4g3f_A          249 MLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE  328 (336)
T ss_dssp             HHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred             HHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence            68999999998877777777766554444477899999999999999999999999997             56888764

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.12  E-value=5.6e-13  Score=104.76  Aligned_cols=76  Identities=22%  Similarity=0.291  Sum_probs=62.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-------Cccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-------RNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~g~~~y~a  159 (177)
                      +..+++.++|..+++|+|+|            |+||+++.  .++++|||+++........       ....+||+.|||
T Consensus       439 qi~~aL~~LH~~gIiHrDiK------------p~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~A  504 (540)
T 3en9_A          439 KIGEIVGKLHKNDVIHNDLT------------TSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKF  504 (540)
T ss_dssp             HHHHHHHHHHHTTEECTTCC------------TTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGH
T ss_pred             HHHHHHHHHHHCcCccCCCC------------HHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCC
Confidence            44678889999999999999            66999998  9999999999876543211       135689999999


Q ss_pred             cccccC--CCCCccceEec
Q psy3254         160 PEVIQE--IGYDCVADMWS  176 (177)
Q Consensus       160 Pe~~~~--~~~~~~~Diws  176 (177)
                      ||++..  ..|+..+|+||
T Consensus       505 PEv~~~~~~~Y~~~~d~ws  523 (540)
T 3en9_A          505 DEIWERFLEGYKSVYDRWE  523 (540)
T ss_dssp             HHHHHHHHHHHHHHCTTHH
T ss_pred             HHHHHHHHHHHHHHHhHHH
Confidence            999976  56888889986

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.10  E-value=4.3e-11  Score=94.69  Aligned_cols=70  Identities=16%  Similarity=0.245  Sum_probs=58.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |++|.+||.+.+..+++.+|...... ....+..+|.+++|||.+||..||.+|+++.|+|+|||+.....
T Consensus       349 ml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          349 LLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             HHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            67999999999999999888765422 22223578999999999999999999999999999999986433

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.09  E-value=7e-11  Score=88.48  Aligned_cols=37  Identities=32%  Similarity=0.380  Sum_probs=34.3

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      ..+|++++|||++||+.||.+|+|++|+|+||||+..
T Consensus       323 ~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          323 NEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             TTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             ccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            4579999999999999999999999999999999753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.07  E-value=6.3e-11  Score=89.77  Aligned_cols=69  Identities=16%  Similarity=0.186  Sum_probs=53.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CCC---------------------CCC-----CCCCCCHHHHHHHHHhcccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PPP---------------------SFR-----EPDVWTPEFIDFVSRCLVKNPEE   52 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~~---------------------~~~-----~~~~~s~~~~~~i~~~l~~~p~~   52 (177)
                      |++|++||.+.+..+.+.+|...  .++                     ...     ..+.+|++++|||.+||..||.+
T Consensus       256 ll~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~  335 (398)
T 4b99_A          256 MLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSA  335 (398)
T ss_dssp             HHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTT
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhH
Confidence            68999999999988877766421  110                     000     01246899999999999999999


Q ss_pred             CCCHHhhhcCcccccCC
Q psy3254          53 RATASEMLNHEFIQVSP   69 (177)
Q Consensus        53 R~~~~~~l~h~~~~~~~   69 (177)
                      |+|+.|+|+|||+....
T Consensus       336 R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          336 RISAAAALRHPFLAKYH  352 (398)
T ss_dssp             SCCHHHHTTSGGGTTTC
T ss_pred             CcCHHHHhcCHhhCcCC
Confidence            99999999999998643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.06  E-value=1.6e-10  Score=85.41  Aligned_cols=66  Identities=18%  Similarity=0.324  Sum_probs=56.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+...++..+   .+..|..+|+++++|+++||..||.+|||+.++++|||+....
T Consensus       207 ll~g~~pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          207 LVSGSLPFDGQNLKELRERVLRG---KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhC---CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence            57899999999988888877766   3333667899999999999999999999999999999997543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.02  E-value=1.7e-10  Score=84.01  Aligned_cols=68  Identities=38%  Similarity=0.844  Sum_probs=57.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+....+..+.....+.+..+..++..+++||.+||..||.+||++.++++|+|+...
T Consensus       209 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence            57899999999888777766655555555567789999999999999999999999999999999854

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.01  E-value=4.9e-11  Score=92.48  Aligned_cols=130  Identities=17%  Similarity=0.224  Sum_probs=79.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCCCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPG   79 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~~~~~~~~   79 (177)
                      |++|.+||.+.+..+.+.++..+.. ...+.+..+|+++++||.+||..||.+||++.+++.|||+............  
T Consensus       220 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~--  297 (484)
T 3nyv_A          220 LLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDV--  297 (484)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CC--
T ss_pred             HHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccc--
Confidence            5789999999998888887765532 2222235689999999999999999999999999999999865432221110  


Q ss_pred             CCCCCCcchHHHHhhh-chhhHHHH-----Hhhh-chHHHHHHHHhhcceEeCCCCCeEEeee
Q psy3254          80 APSGGGFCDFEFLKFL-SYDDLQHR-----MANL-DCEMEREIEQLRRNILLNTEGHAKLADF  135 (177)
Q Consensus        80 ~~~~~~~~~~~~l~~l-~~~~~~~~-----~~~~-~~~~~~~i~~l~~nil~~~~~~~~l~df  135 (177)
                       ...  ......++.+ ....+...     ..+. ......+++++...+..+.+|.+...+|
T Consensus       298 -~~~--~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El  357 (484)
T 3nyv_A          298 -PSL--DNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAEL  357 (484)
T ss_dssp             -CBC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEEEHHHH
T ss_pred             -cch--HHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHHHHHHHhCcCCCceEeHHHH
Confidence             000  0001111111 11111111     1111 1224456676777777788888888787

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=98.95  E-value=8.4e-10  Score=79.77  Aligned_cols=67  Identities=25%  Similarity=0.389  Sum_probs=52.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+..+....+.............+++++++||.+||..||.+||++.+++.|+|++.
T Consensus       218 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          218 LLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            4789999999887776665544332222223457999999999999999999999999999999974

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=98.94  E-value=8.6e-10  Score=82.57  Aligned_cols=67  Identities=21%  Similarity=0.189  Sum_probs=55.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+..+.+.+|........ ..+..+|.++++||.+||..||.+||++.++++|||+..
T Consensus       211 ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          211 LLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence            5789999999998888887766532111 112567999999999999999999999999999999974

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=98.94  E-value=7.5e-10  Score=80.44  Aligned_cols=69  Identities=38%  Similarity=0.752  Sum_probs=57.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+....+.++.....+....+..++.+++++|.+||..||.+||++.+++.|+|+....
T Consensus       215 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          215 MAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            478999999998887777766655555544567899999999999999999999999999999998643

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=98.93  E-value=5.8e-11  Score=92.16  Aligned_cols=127  Identities=15%  Similarity=0.192  Sum_probs=81.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCCCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPG   79 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~~~~~~~~   79 (177)
                      |++|.+||.+.+..+.+.++..+.. ...+.+..+|+++++||.+||..||.+||++.+++.|||++.........    
T Consensus       215 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~----  290 (486)
T 3mwu_A          215 LLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTI----  290 (486)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCG----
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccc----
Confidence            5789999999998888877765532 22222356799999999999999999999999999999998653322110    


Q ss_pred             CCCCCCcc-hHHHHhhh---------chhhHHHHHhhh-chHHHHHHHHhhcceEeCCCCCeEEeee
Q psy3254          80 APSGGGFC-DFEFLKFL---------SYDDLQHRMANL-DCEMEREIEQLRRNILLNTEGHAKLADF  135 (177)
Q Consensus        80 ~~~~~~~~-~~~~l~~l---------~~~~~~~~~~~~-~~~~~~~i~~l~~nil~~~~~~~~l~df  135 (177)
                          .... ....+..+         ....+.....+. ......+++++...+..+.+|.+...+|
T Consensus       291 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~~F~~~D~d~dG~I~~~El  353 (486)
T 3mwu_A          291 ----SDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDEL  353 (486)
T ss_dssp             ----GGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSSBCHHHH
T ss_pred             ----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCceeeHHHH
Confidence                0000 01111111         111111111121 2234567777777788888898888787

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=98.92  E-value=8.1e-10  Score=81.30  Aligned_cols=68  Identities=38%  Similarity=0.759  Sum_probs=57.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+.+..+.....+.+..+..++++++++|.+||..||.+||++.+++.|+|+...
T Consensus       234 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          234 MVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             HHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence            57899999998888777776655555554455689999999999999999999999999999999753

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.92  E-value=1.3e-10  Score=90.32  Aligned_cols=129  Identities=19%  Similarity=0.229  Sum_probs=79.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCC---CCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGN---IPPG   76 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~---~~~~   76 (177)
                      |++|.+||.+.+..+.+.++..+... ....+..+|.++++||.+||..||.+||++.++++|||+.......   ... 
T Consensus       230 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~-  308 (494)
T 3lij_A          230 LLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIEL-  308 (494)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---C-
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccc-
Confidence            57899999999988888777655322 1222356899999999999999999999999999999997532110   000 


Q ss_pred             CCCCCCCCCcchHHHHhhhch-hhHH-----HHHhhh-chHHHHHHHHhhcceEeCCCCCeEEeeee
Q psy3254          77 PPGAPSGGGFCDFEFLKFLSY-DDLQ-----HRMANL-DCEMEREIEQLRRNILLNTEGHAKLADFG  136 (177)
Q Consensus        77 ~~~~~~~~~~~~~~~l~~l~~-~~~~-----~~~~~~-~~~~~~~i~~l~~nil~~~~~~~~l~dfg  136 (177)
                      +...      ...+.++.+.. ..+.     ....+. ......+++++...+..+.+|.+...+|.
T Consensus       309 ~~~~------~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~  369 (494)
T 3lij_A          309 PSLA------NAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELI  369 (494)
T ss_dssp             CCCS------SHHHHHHTTTTCCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred             cccH------HHHHHHHHHHHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcCCCCeEcHHHHH
Confidence            0000      11222221111 1111     111111 22355667777777777788887777774

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.90  E-value=5.6e-10  Score=83.33  Aligned_cols=66  Identities=18%  Similarity=0.244  Sum_probs=56.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH------HhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA------SEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~------~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+++.+|....   ...|..++.+++++|++||..||.+|+++      ++++.|||+....
T Consensus       217 ll~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          217 MLCGHAPFEAENEDDLFEAILNDE---VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence            578999999999988888887662   33366789999999999999999999998      8999999998654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.89  E-value=5.5e-10  Score=82.83  Aligned_cols=65  Identities=22%  Similarity=0.381  Sum_probs=52.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+......++...   ....|..+|+++++||.+||..||.+|||+.++++|||+...
T Consensus       201 ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          201 MLVGRLPFDDEFIPNLFKKVNSC---VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             HHHSSCSSBCSSSTTCBCCCCSS---CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             HHhCCCCCCCccHHHHHHHHHcC---CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            57899999987765555545433   233366789999999999999999999999999999999754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.89  E-value=1.3e-09  Score=78.58  Aligned_cols=71  Identities=17%  Similarity=0.326  Sum_probs=57.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIP   74 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~~~   74 (177)
                      |++|.+||.+.+..+....+...   ....|..++.+++++|.+||..||.+||++.+++.|+|+........+
T Consensus       205 l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~~p  275 (284)
T 2vgo_A          205 FLVGMPPFDSPSHTETHRRIVNV---DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLP  275 (284)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHTT---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCCCC
T ss_pred             HHHCCCCCCCCCHhHHHHHHhcc---ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccccCC
Confidence            47899999998877777666554   223356789999999999999999999999999999999875544433

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.88  E-value=1.3e-09  Score=80.79  Aligned_cols=66  Identities=26%  Similarity=0.413  Sum_probs=55.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+......+|...   ....|..+|++++++|.+||..||.+|+     ++.++++|+|+....
T Consensus       198 ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          198 MMCGRLPFYNQDHERLFELILME---EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence            57899999999888877777655   2233667899999999999999999999     899999999997643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=98.88  E-value=1.8e-09  Score=83.01  Aligned_cols=67  Identities=33%  Similarity=0.413  Sum_probs=55.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+..+.+.++..+... ....+..+|+++++||.+||..||.+||++.++++|||+..
T Consensus       206 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          206 LLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred             HHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence            57899999999888888777655322 22223567999999999999999999999999999999974

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.87  E-value=1.4e-09  Score=79.98  Aligned_cols=66  Identities=21%  Similarity=0.379  Sum_probs=56.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+..+.+.+|....   ...|..++.+++++|.+||..||.+|+     ++++++.|||+....
T Consensus       196 ll~g~~pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          196 MLAGYTPFYDSNTMKTYEKILNAE---LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence            578999999999888888777652   333677899999999999999999999     899999999998643

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=98.87  E-value=1.6e-09  Score=78.66  Aligned_cols=65  Identities=25%  Similarity=0.356  Sum_probs=52.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |++|++||.+.+.......+.... ..+..+..++.+++++|.+||..||.+||++.+++.|||+.
T Consensus       233 l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          233 FVFGQCPFMDERIMCLHSKIKSQA-LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC-CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHCCCCCCCccHHHHHHHHhccc-CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            578999999988776666554432 22222356899999999999999999999999999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.87  E-value=1.3e-09  Score=79.68  Aligned_cols=68  Identities=66%  Similarity=1.329  Sum_probs=56.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+.......+.....+.+..+..++.+++++|.+||..||.+||++.+++.|+|+...
T Consensus       218 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          218 MAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred             HHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence            47899999998877766666555555555566789999999999999999999999999999999854

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=98.86  E-value=3.8e-09  Score=76.03  Aligned_cols=69  Identities=28%  Similarity=0.294  Sum_probs=54.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+.......+..+.. .....+..+++++++||.+||..||.+||++.+++.|+|+....
T Consensus       200 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          200 LLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             HHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCCh
Confidence            4789999999888777766654421 12222356799999999999999999999999999999998653

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.86  E-value=3.1e-09  Score=78.30  Aligned_cols=72  Identities=25%  Similarity=0.235  Sum_probs=55.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGN   72 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~   72 (177)
                      |++|++||.+.+..+....+.... ......+..++..++++|.+||..||.+||++.+++.|+|++......
T Consensus       226 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~  298 (327)
T 3lm5_A          226 LLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFEN  298 (327)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTC
T ss_pred             HHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccccc
Confidence            578999999988877766555332 122222356899999999999999999999999999999998654443

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.86  E-value=2.2e-09  Score=83.20  Aligned_cols=65  Identities=25%  Similarity=0.396  Sum_probs=55.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+...++.++..+   .+..|..+++++++||.+||..||.+||++.+++.|+|+...
T Consensus       209 lltG~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          209 LLCGTLPFDDDHVPTLFKKICDG---IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HHHSSCSSCCSSSHHHHHHHHTT---CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HhhCCCCCCCCCHHHHHHHHhcC---CcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            57899999998888888777666   233366789999999999999999999999999999999754

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=98.86  E-value=1.9e-09  Score=81.29  Aligned_cols=40  Identities=38%  Similarity=0.768  Sum_probs=33.5

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      +..+++++++||.+||..||.+||++.++++|||+.....
T Consensus       303 ~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          303 HRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             ---CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             ccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence            3457899999999999999999999999999999986543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.85  E-value=1.2e-09  Score=78.56  Aligned_cols=66  Identities=30%  Similarity=0.438  Sum_probs=55.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+..+....+...   ....|..++.++++||.+||..||.+||++.++++|+|+....
T Consensus       200 l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          200 FLVGKPPFEANTYQETYKRISRV---EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHT---CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             HHHCCCCCCCCcHHHHHHHHHhC---CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence            47899999998887777666544   2233567899999999999999999999999999999998654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.85  E-value=1.9e-09  Score=80.35  Aligned_cols=66  Identities=21%  Similarity=0.384  Sum_probs=56.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+..+.+.+|..+.   ...|..++.+++++|.+||..||.+|++     +++++.|+|+....
T Consensus       231 ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          231 MAAGYPPFFADQPIQIYEKIVSGK---VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             HhhCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence            578999999999888888887662   3336778999999999999999999998     99999999997543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.84  E-value=1.8e-09  Score=80.56  Aligned_cols=67  Identities=16%  Similarity=0.255  Sum_probs=56.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~~~   70 (177)
                      |++|++||.+.+..+++.+|....   ...|..+|.++++||.+||..||.+|++     +.+++.|+|+....+
T Consensus       214 ll~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w  285 (353)
T 2i0e_A          214 MLAGQAPFEGEDEDELFQSIMEHN---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  285 (353)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCH
T ss_pred             HHcCCCCCCCCCHHHHHHHHHhCC---CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCH
Confidence            578999999999888888887652   2336778999999999999999999994     699999999986543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=98.83  E-value=5.1e-10  Score=82.42  Aligned_cols=68  Identities=28%  Similarity=0.274  Sum_probs=55.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+.+.++........ ..+..+|.++++||.+||..||.+||++.++++|||+...
T Consensus       196 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          196 LLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            5789999999988888777765532211 1124679999999999999999999999999999999854

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.83  E-value=1.8e-09  Score=77.62  Aligned_cols=66  Identities=21%  Similarity=0.438  Sum_probs=48.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||...+....+.++...   ....|..++.+++++|.+||..||.+||++.+++.|+|+....
T Consensus       205 l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          205 LLIGRPPFDTDTVKNTLNKVVLA---DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             HHHSSCSSCCCSCC-----CCSS---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             HHhCCCCCCChhHHHHHHHHhhc---ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence            46899999887766655555444   2233567899999999999999999999999999999997643

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.83  E-value=2.7e-09  Score=77.87  Aligned_cols=68  Identities=18%  Similarity=0.188  Sum_probs=49.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC---C-CCCCC--------------------CCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK---P-PPSFR--------------------EPDVWTPEFIDFVSRCLVKNPEERATA   56 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~---~-~~~~~--------------------~~~~~s~~~~~~i~~~l~~~p~~R~~~   56 (177)
                      |++|++||.+.+..+.+.++...   . ...+.                    ....++.++++||.+||..||.+||++
T Consensus       212 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  291 (308)
T 3g33_A          212 MFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISA  291 (308)
T ss_dssp             TTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCH
Confidence            68999999998877666554321   0 00000                    013568999999999999999999999


Q ss_pred             HhhhcCcccccC
Q psy3254          57 SEMLNHEFIQVS   68 (177)
Q Consensus        57 ~~~l~h~~~~~~   68 (177)
                      .++++|+|+...
T Consensus       292 ~e~l~h~~~~~~  303 (308)
T 3g33_A          292 FRALQHSYLHKD  303 (308)
T ss_dssp             HHHHTSTTC---
T ss_pred             HHHhcCccccCC
Confidence            999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.83  E-value=4.3e-09  Score=76.49  Aligned_cols=67  Identities=15%  Similarity=0.255  Sum_probs=55.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |++|..||.+.+..+....+....   ...+..+++++.++|.+||..||.+||++.++++|+|+.....
T Consensus       206 l~~g~~p~~~~~~~~~~~~i~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          206 ITTGLYPFEGDNIYKLFENIGKGS---YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHCC---CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHhCCCCCCCchHHHHHHHHhcCC---CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            478999999988877777765552   2335678999999999999999999999999999999986543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.83  E-value=1.1e-09  Score=81.58  Aligned_cols=67  Identities=19%  Similarity=0.335  Sum_probs=56.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH-hhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS-EMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~-~~l~h~~~~~~~~   70 (177)
                      |++|.+||.+.+..+++.+|.... +.+  |..+|.++++||.+||..||.+|+++. ++++|||+....+
T Consensus       211 ll~g~~Pf~~~~~~~~~~~i~~~~-~~~--p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w  278 (345)
T 1xjd_A          211 MLIGQSPFHGQDEEELFHSIRMDN-PFY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  278 (345)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC-CCC--CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             HhcCCCCCCCCCHHHHHHHHHhCC-CCC--CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCH
Confidence            578999999999888888776553 223  567899999999999999999999998 9999999986543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=98.83  E-value=2.3e-09  Score=79.80  Aligned_cols=67  Identities=33%  Similarity=0.697  Sum_probs=56.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+....+..+..+..+... +..++..+++||.+||..||.+||++.++++|+|+...
T Consensus       246 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          246 LAERKPPLFNMNAMSALYHIAQNESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             HHhCCCCCCCCChHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence            57899999998888777777655444443 45789999999999999999999999999999999753

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=98.83  E-value=1e-09  Score=80.33  Aligned_cols=37  Identities=27%  Similarity=0.436  Sum_probs=33.9

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      .++.++++||.+||..||.+|||+.++++|||++...
T Consensus       272 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          272 GFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             TCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             ccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence            4688999999999999999999999999999998643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=98.82  E-value=2.1e-09  Score=78.91  Aligned_cols=67  Identities=43%  Similarity=0.966  Sum_probs=55.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+....+..+.....+.+. +..++..++++|.+||..||.+||++.+++.|+|+...
T Consensus       227 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          227 MAEGAPPLCDMHPMRALFLIPRNPAPRLK-SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCS-CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             HHhCCCCCCCCcHHHHHHHhhcCccccCC-ccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            57899999998887777666555444432 45689999999999999999999999999999999864

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.82  E-value=1.8e-09  Score=86.35  Aligned_cols=66  Identities=20%  Similarity=0.328  Sum_probs=51.4

Q ss_pred             CccCCCCCCCCC---HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIH---PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~---~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+   ..++...+... .+.+  |..+|++++|||.+||..||.+|++     +++++.||||....
T Consensus       384 mLtG~~PF~~~~~~~~~~i~~~i~~~-~~~~--p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          384 LLRGHSPFRQHKTKDKHEIDRMTLTM-AVEL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             HHHSSCTTCGGGCCCHHHHHHHHHHC-CCCC--CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             HHhCCCCCCCCChHHHHHHHHhhcCC-CCCC--CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence            689999997643   33444444444 2233  6789999999999999999999998     79999999998654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.82  E-value=3.5e-09  Score=81.28  Aligned_cols=65  Identities=26%  Similarity=0.402  Sum_probs=55.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+...+...+....   ...|..+++++++||.+||..||.+|+     ++.++++|||+...
T Consensus       342 ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          342 MMCGRLPFYNQDHEKLFELILMEE---IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HhhCCCCCCCCCHHHHHHHHHhCC---CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            578999999998888777776552   233667899999999999999999999     99999999999864

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.82  E-value=2.2e-09  Score=86.54  Aligned_cols=68  Identities=16%  Similarity=0.250  Sum_probs=58.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-----HhhhcCcccccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA-----SEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~-----~~~l~h~~~~~~~~~   71 (177)
                      |++|.+||.+.+..+++.+|....   ...|..+|.++++||++||..||.+|+++     ++++.|+||....+.
T Consensus       535 lltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~  607 (674)
T 3pfq_A          535 MLAGQAPFEGEDEDELFQSIMEHN---VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE  607 (674)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHSSC---CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHH
T ss_pred             HHcCCCCCCCCCHHHHHHHHHhCC---CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHH
Confidence            578999999999999988887763   33367899999999999999999999997     999999999876543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.82  E-value=1.8e-09  Score=78.11  Aligned_cols=66  Identities=24%  Similarity=0.412  Sum_probs=49.3

Q ss_pred             CccCCCCCCCCCHH-HHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.... .....+..+.. ....+...+++++++|.+||..||.+||++.+++.|+|++.
T Consensus       222 l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          222 MATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHSSCTTTTCSSHHHHHHHHTTTCC-CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHhCCCCCCCcCcHHHHHHHHhccCC-ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            47899999885544 44444433322 22224567899999999999999999999999999999975

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=98.81  E-value=2.9e-09  Score=82.96  Aligned_cols=69  Identities=22%  Similarity=0.280  Sum_probs=56.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+..+.+.++..+... ....+..+|.++++||.+||..||.+||++.+++.|||+....
T Consensus       240 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          240 LLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            57899999999988888877765321 2222256899999999999999999999999999999998643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=98.81  E-value=4.1e-09  Score=76.17  Aligned_cols=67  Identities=24%  Similarity=0.401  Sum_probs=49.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC---CC-CC-------------CC---------CCCCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT---KP-PP-------------SF---------REPDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~---~~-~~-------------~~---------~~~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|++||.+.+..+.+.++..   .. ..             .+         .....++.++++||.+||..||.+||
T Consensus       194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  273 (288)
T 1ob3_A          194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI  273 (288)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCC
Confidence            5789999999877665544321   00 00             00         01134789999999999999999999


Q ss_pred             CHHhhhcCccccc
Q psy3254          55 TASEMLNHEFIQV   67 (177)
Q Consensus        55 ~~~~~l~h~~~~~   67 (177)
                      ++.++++|+|+..
T Consensus       274 t~~e~l~hp~f~~  286 (288)
T 1ob3_A          274 TAKQALEHAYFKE  286 (288)
T ss_dssp             CHHHHHTSGGGGC
T ss_pred             CHHHHhcCcchhh
Confidence            9999999999975

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.81  E-value=3.6e-09  Score=77.32  Aligned_cols=68  Identities=25%  Similarity=0.508  Sum_probs=54.3

Q ss_pred             CccCCCCCCCC-CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||... +..+.+.++.....+.+.....++.+++++|.+||..||.+||++.+++.|+|++..
T Consensus       222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          222 LATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             HHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             HHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence            47899999874 455666666555555554345689999999999999999999999999999999754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=98.80  E-value=5.7e-09  Score=78.82  Aligned_cols=68  Identities=19%  Similarity=0.293  Sum_probs=54.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+.+.++..... .....+..++.++++||.+||..||.+||++.++++|+|+...
T Consensus       243 lltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          243 LLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence            5789999999988877776654432 1112235679999999999999999999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.78  E-value=2.8e-09  Score=78.59  Aligned_cols=65  Identities=26%  Similarity=0.365  Sum_probs=55.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+.+.++...   ....|..++.+++++|.+||..||.+|+     ++.+++.|||+...
T Consensus       214 l~~g~~pf~~~~~~~~~~~i~~~---~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          214 MLTGAPPFTGENRKKTIDKILKC---KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHT---CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhC---CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            57899999999888877777655   2233567899999999999999999999     88999999999754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=98.78  E-value=3.4e-09  Score=78.41  Aligned_cols=70  Identities=23%  Similarity=0.274  Sum_probs=55.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |++|++||.+.+..+.+.++...... .......++++++++|.+||..||.+||++.++++|||+.....
T Consensus       269 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          269 LLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            57899999999888777766544321 11112347999999999999999999999999999999986543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.78  E-value=3.2e-09  Score=76.59  Aligned_cols=67  Identities=33%  Similarity=0.665  Sum_probs=50.9

Q ss_pred             CccCCCCCCCC-CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDI-HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+. +....+..+.....+... +..++.+++++|.+||..||.+||++.++++|||+...
T Consensus       206 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          206 LAILRFPYDSWGTPFQQLKQVVEEPSPQLP-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHHTSCSSCCCSCHHHHHHHHHHSCCCCCC-TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHCCCCccccCchHHHHHHHhccCCCCcc-cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            46899999863 444444444433333332 35689999999999999999999999999999999754

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.77  E-value=3.1e-09  Score=78.22  Aligned_cols=70  Identities=17%  Similarity=0.292  Sum_probs=51.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC---CCCC-CC-----------------------CCCCCCCHHHHHHHHHhcccCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT---KPPP-SF-----------------------REPDVWTPEFIDFVSRCLVKNPEER   53 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~---~~~~-~~-----------------------~~~~~~s~~~~~~i~~~l~~~p~~R   53 (177)
                      |++|++||.+.+..+.+..+..   .... .+                       ..+..++.++++||.+||..||.+|
T Consensus       194 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  273 (324)
T 3mtl_A          194 MATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNR  273 (324)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccC
Confidence            5789999999887665544432   1110 00                       0012468999999999999999999


Q ss_pred             CCHHhhhcCcccccCCC
Q psy3254          54 ATASEMLNHEFIQVSPG   70 (177)
Q Consensus        54 ~~~~~~l~h~~~~~~~~   70 (177)
                      |++.++++|||+.....
T Consensus       274 ~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          274 ISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CCHHHHTTSGGGGGGCS
T ss_pred             CCHHHHhcChhhhhccc
Confidence            99999999999986543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=98.77  E-value=2.8e-09  Score=79.81  Aligned_cols=67  Identities=28%  Similarity=0.318  Sum_probs=54.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+..+.+.++..+... ....+..+++++++||.+||..||.+||++.+++.|+|+..
T Consensus       223 ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          223 LLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            57899999999888877777654321 11112457999999999999999999999999999999974

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=98.77  E-value=1e-08  Score=74.62  Aligned_cols=68  Identities=24%  Similarity=0.250  Sum_probs=54.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+.+.++..+... ....+..++.+++++|.+||..||.+||++.+++.|+|+...
T Consensus       200 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          200 LLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            47899999998887777666544221 112235679999999999999999999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.76  E-value=3.3e-09  Score=76.08  Aligned_cols=65  Identities=22%  Similarity=0.321  Sum_probs=53.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+.......+....   ...|..++.+++++|.+||..||.+||++.+++.|+|+...
T Consensus       204 l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          204 LLCGTLPFDDEHVPTLFKKIRGGV---FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHhCCCCCCCCcHHHHHHHhhcCc---ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence            478999999988777776665442   22256689999999999999999999999999999999754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.76  E-value=7.9e-09  Score=76.75  Aligned_cols=67  Identities=25%  Similarity=0.267  Sum_probs=51.7

Q ss_pred             CccCCCCCCC---CCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGD---IHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~---~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+   .+..+.+..+..+... ....+..+|.++++||.+||..||.+||++.+++.|||+..
T Consensus       213 ll~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          213 MLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             HHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             HhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            5789999986   3455666666544322 11123568999999999999999999999999999999964

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.76  E-value=4.8e-09  Score=79.81  Aligned_cols=72  Identities=15%  Similarity=0.162  Sum_probs=58.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHhhhcCcccccCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEE--RATASEMLNHEFIQVSPGGN   72 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~--R~~~~~~l~h~~~~~~~~~~   72 (177)
                      |++|++||.+.+..+.+.+|.... ...++.+..+|.++++||.+||..+|.+  |+++++++.|+|+....+..
T Consensus       266 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~~  340 (410)
T 3v8s_A          266 MLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAW  340 (410)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCCS
T ss_pred             HHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHHH
Confidence            578999999999888888887542 2334334578999999999999999988  99999999999998765543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=98.76  E-value=6.9e-09  Score=76.41  Aligned_cols=68  Identities=15%  Similarity=0.192  Sum_probs=49.1

Q ss_pred             CccCCCCCCCCCHH-HHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+.. ......... ......+..++.++++||.+||..||.+||++.++++|+|+....
T Consensus       201 ll~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          201 MLAGELPWDQPSDSCQEYSDWKEK-KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             HHHSSCSCSSSCTTSHHHHHHHTT-CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HHhCCCCCCCCchHHHHHHHHhcc-cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence            57899999876543 222222222 112222356799999999999999999999999999999998643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.76  E-value=4e-09  Score=75.53  Aligned_cols=67  Identities=15%  Similarity=0.206  Sum_probs=48.7

Q ss_pred             CccCCCCCCCCCHH-HHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|..||.+.+.. ..+..+... ......+..++..++++|.+||..||.+||++.++++|+|+...
T Consensus       201 l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          201 MLAGELPWDQPSDSCQEYSDWKEK-KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             HHHSSCCCSCSCTTSHHHHHHHTT-CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHhCCCCCCCCchHHHHHHHhhhc-ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence            47899999876543 222222222 11222235679999999999999999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=98.75  E-value=2.7e-09  Score=80.14  Aligned_cols=67  Identities=22%  Similarity=0.223  Sum_probs=54.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+..+.+.++...... ....+..+++++++||.+||..||.+||++.++++|||+..
T Consensus       281 lltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          281 LLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            57899999999888877777654321 11113567999999999999999999999999999999975

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=98.75  E-value=4.3e-09  Score=75.51  Aligned_cols=68  Identities=21%  Similarity=0.316  Sum_probs=54.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+...++..+..... .....++++++++|.+||..||.+||++.++++|+|++..
T Consensus       200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          200 LLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            4789999999888877777765522111 1113679999999999999999999999999999999764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=98.74  E-value=2.3e-09  Score=79.02  Aligned_cols=67  Identities=21%  Similarity=0.251  Sum_probs=52.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+..+.+.++........ ..+...+..+++||.+||..||.+||++.+++.|||+..
T Consensus       210 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          210 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             HHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence            5789999999888777766654321111 112467999999999999999999999999999999974

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.74  E-value=6.8e-09  Score=75.20  Aligned_cols=70  Identities=33%  Similarity=0.387  Sum_probs=54.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |++|++||.+.+.......+..+... ....+..++..++++|.+||..||.+||++.+++.|+|++....
T Consensus       222 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          222 LLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred             HHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence            46899999998877766666544221 11112457999999999999999999999999999999986543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=98.74  E-value=4.7e-09  Score=77.39  Aligned_cols=69  Identities=20%  Similarity=0.336  Sum_probs=50.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CC--CCCC-----------CC------------CCCCHHHHHHHHHhcccCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PP--PSFR-----------EP------------DVWTPEFIDFVSRCLVKNPEER   53 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~--~~~~-----------~~------------~~~s~~~~~~i~~~l~~~p~~R   53 (177)
                      |++|.+||.+.+..+.+.++...  .+  ..+.           .+            ..++.++++||.+||..||.+|
T Consensus       231 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  310 (329)
T 3gbz_A          231 MLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKR  310 (329)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhC
Confidence            47899999998877666555321  00  0000           00            0167999999999999999999


Q ss_pred             CCHHhhhcCcccccCC
Q psy3254          54 ATASEMLNHEFIQVSP   69 (177)
Q Consensus        54 ~~~~~~l~h~~~~~~~   69 (177)
                      |++.++++|||+....
T Consensus       311 ~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          311 ISAKNALEHPYFSHND  326 (329)
T ss_dssp             CCHHHHHTSGGGSSSC
T ss_pred             CCHHHHhCCcccCCCC
Confidence            9999999999998653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.74  E-value=3.9e-09  Score=76.24  Aligned_cols=68  Identities=21%  Similarity=0.287  Sum_probs=54.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+.+..+..+.. .....+..++.+++++|.+||..||.+||++.+++.|+|++..
T Consensus       215 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          215 LLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            4689999999888777766654432 2222235679999999999999999999999999999999754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.74  E-value=8.6e-09  Score=74.61  Aligned_cols=66  Identities=24%  Similarity=0.440  Sum_probs=55.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+....+...   ....|..++..++++|.+||..||.+||++.+++.|+|+....
T Consensus       208 l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          208 LLVGKPPFETSCLKETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGY  273 (294)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHTT---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHhhc---cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence            47899999998887777666555   2333667899999999999999999999999999999997543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.74  E-value=3.5e-09  Score=80.08  Aligned_cols=71  Identities=27%  Similarity=0.343  Sum_probs=52.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC-------------------CCCCC-------CCCCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK-------------------PPPSF-------REPDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~-------------------~~~~~-------~~~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|++||.+.+..+.+..+...                   ..+..       ..+...++++++||.+||..||.+||
T Consensus       235 ll~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  314 (394)
T 4e7w_A          235 LMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL  314 (394)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCC
Confidence            57899999998876655544320                   00000       01234789999999999999999999


Q ss_pred             CHHhhhcCcccccCCCC
Q psy3254          55 TASEMLNHEFIQVSPGG   71 (177)
Q Consensus        55 ~~~~~l~h~~~~~~~~~   71 (177)
                      ++.+++.|||+......
T Consensus       315 t~~e~l~hp~f~~~~~~  331 (394)
T 4e7w_A          315 TAIEALCHPFFDELRTG  331 (394)
T ss_dssp             CHHHHHTSGGGSTTTSS
T ss_pred             CHHHHhcChhhhhhccc
Confidence            99999999999865443

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.73  E-value=7e-09  Score=76.89  Aligned_cols=67  Identities=25%  Similarity=0.536  Sum_probs=49.7

Q ss_pred             CccCCCCCCCCC-HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIH-PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.. ....+..+.... .....|...+.++++||.+||..||.+||++.+++.|||+...
T Consensus       213 ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          213 MTYGKTPFQQIINQISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HHHSSCTTTTCCSHHHHHHHHHCTT-SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHhCCCcchhhhhHHHHHHHHhcCC-cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            578999998753 333333333221 1222256678999999999999999999999999999999854

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.73  E-value=8.9e-09  Score=76.25  Aligned_cols=67  Identities=28%  Similarity=0.344  Sum_probs=51.1

Q ss_pred             CccCCCCCCCCCH-HHHHhhCcCCCCCCCCC-----------------CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDIHP-MRAIFMIPTKPPPSFRE-----------------PDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~~~-~~~~~~i~~~~~~~~~~-----------------~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++|.+||.+.+. .+.+..+..... .+..                 +..++.++++||.+||..||.+||++.++++|
T Consensus       245 l~~g~~pf~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          245 MFYNVVPFSLKISLVELFNNIRTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             HHHSSCSSCCSSCSHHHHHHHTSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCCCCCCCcHHHHHHHHhccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            4789999988766 555555544421 2210                 14579999999999999999999999999999


Q ss_pred             cccccC
Q psy3254          63 EFIQVS   68 (177)
Q Consensus        63 ~~~~~~   68 (177)
                      +|+...
T Consensus       324 p~f~~~  329 (348)
T 2pml_X          324 EWLADT  329 (348)
T ss_dssp             GGGTTC
T ss_pred             ccccCC
Confidence            999753

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.73  E-value=6.9e-09  Score=78.41  Aligned_cols=67  Identities=25%  Similarity=0.536  Sum_probs=50.4

Q ss_pred             CccCCCCCCCCC-HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIH-PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.. ....+..+.... ..+..|...+.++++||.+||..||.+||++.+++.|+|+...
T Consensus       260 ll~G~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          260 MTYGKTPFQQIINQISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HHHSSCTTTTCCCHHHHHHHHHCTT-SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHHCCCcchhhhHHHHHHHHHhCcc-ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            578999998764 334444444332 1222255668999999999999999999999999999999854

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.72  E-value=6.2e-09  Score=75.71  Aligned_cols=66  Identities=39%  Similarity=0.850  Sum_probs=55.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+.......+.....+.+  +..++..++++|.+||..||.+||++.+++.|+|+...
T Consensus       212 l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          212 LARGEPPHSELHPMKVLFLIPKNNPPTL--EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCC--CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             HccCCCCCCCcCHHHHHHHhhcCCCCCC--ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            4789999999888777766655544444  56789999999999999999999999999999999764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.72  E-value=1e-08  Score=74.98  Aligned_cols=68  Identities=21%  Similarity=0.289  Sum_probs=47.9

Q ss_pred             CccCCCCCCCCCH---------------HHHHhhCcCCCCCCCCC--CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCc
Q psy3254           1 MAEGKPPYGDIHP---------------MRAIFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHE   63 (177)
Q Consensus         1 m~~g~~Pf~~~~~---------------~~~~~~i~~~~~~~~~~--~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~   63 (177)
                      |++|++||.+.+.               ......+..+. ..+..  ...++.++++||.+||..||.+||++.++++||
T Consensus       219 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp  297 (316)
T 2ac3_A          219 LLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP  297 (316)
T ss_dssp             HHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred             HHHCCCCCcccccccccccccccchhHHHHHHHHHhccC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence            5789999987642               22333343332 12211  145799999999999999999999999999999


Q ss_pred             ccccCC
Q psy3254          64 FIQVSP   69 (177)
Q Consensus        64 ~~~~~~   69 (177)
                      |++...
T Consensus       298 ~~~~~~  303 (316)
T 2ac3_A          298 WVQGCA  303 (316)
T ss_dssp             TCC---
T ss_pred             hhcCCC
Confidence            998654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.72  E-value=8.5e-09  Score=76.23  Aligned_cols=60  Identities=20%  Similarity=0.371  Sum_probs=51.3

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |++||.+.+..+++..+..+..+..  |..+++++++++.+|+..||.+||++.+++.+
T Consensus       253 llt~G~~Pf~~~~~~~~~~~i~~g~~~~~--p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          253 IFTYGKQPWYQLSNTEAIDCITQGRELER--PRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHTTSCCTTCSSCHHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHcCCCCCC--cccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            456 9999999999888888876654444  67889999999999999999999999999764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.72  E-value=4.9e-09  Score=78.48  Aligned_cols=66  Identities=30%  Similarity=0.402  Sum_probs=52.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |++|.+||.+.+....+..+..+... ....+...+.+++++|.+||..||.+||++.++++|||++
T Consensus       298 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          298 LLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            57899999998877777666544221 1111246789999999999999999999999999999986

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=98.71  E-value=9e-09  Score=73.87  Aligned_cols=66  Identities=17%  Similarity=0.232  Sum_probs=55.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+....+..+..+.+  +..++.+++++|.+||..||.+||++.+++.|+|+...
T Consensus       209 l~~g~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          209 LCALMPPFTAFSQKELAGKIREGKFRRI--PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             HHHCCCCCcccCHHHHHHHHhhcccccC--CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            4789999999888777776665544443  56789999999999999999999999999999998653

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.71  E-value=1.3e-08  Score=74.62  Aligned_cols=67  Identities=21%  Similarity=0.191  Sum_probs=53.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+..+.+.++........ ..+...+..+++||.+||..||.+||++.+++.|||+..
T Consensus       211 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          211 LLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence            5789999999888877777655422111 112467899999999999999999999999999999974

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=98.71  E-value=5e-09  Score=76.89  Aligned_cols=71  Identities=23%  Similarity=0.345  Sum_probs=51.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC---CCCCC--------------C--------------CCCCCCCHHHHHHHHHhcccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT---KPPPS--------------F--------------REPDVWTPEFIDFVSRCLVKN   49 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~---~~~~~--------------~--------------~~~~~~s~~~~~~i~~~l~~~   49 (177)
                      |++|++||.+.+..+.+..+..   .....              +              ..+..++.++++||.+||..|
T Consensus       202 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  281 (317)
T 2pmi_A          202 MITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLN  281 (317)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSS
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCC
Confidence            5789999999887665544421   00000              0              011256899999999999999


Q ss_pred             CCCCCCHHhhhcCcccccCCCC
Q psy3254          50 PEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus        50 p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      |.+||++.++++|||+......
T Consensus       282 P~~Rpt~~e~l~hp~f~~~~~~  303 (317)
T 2pmi_A          282 PDMRLSAKQALHHPWFAEYYHH  303 (317)
T ss_dssp             GGGSCCHHHHTTSGGGGGGCC-
T ss_pred             cccCCCHHHHhCChhhhcccch
Confidence            9999999999999999865433

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.71  E-value=7.3e-09  Score=78.04  Aligned_cols=36  Identities=28%  Similarity=0.507  Sum_probs=33.5

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      ..+++++|||.+||..||.+|+|+.++++|||+...
T Consensus       300 ~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          300 DCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             CCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             cCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence            568999999999999999999999999999998754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=98.70  E-value=1.9e-08  Score=75.18  Aligned_cols=67  Identities=24%  Similarity=0.343  Sum_probs=47.8

Q ss_pred             CccCCCCCCCCCH----HHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHP----MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~----~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+.    ...+..+... ...+..+..+|+++++||.+||..||.+||++.+++.|+|+...
T Consensus       211 ll~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          211 MLVGAYPFEDPEEPRDYRKTIQRILSV-KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             HHHSSCSCC----CCCHHHHHHHHHTT-CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             HHhCCCCCCCCccHHHHHHHHHHHhcC-CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence            5789999987543    3344444333 22232234679999999999999999999999999999999654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=98.70  E-value=9.6e-09  Score=76.44  Aligned_cols=69  Identities=19%  Similarity=0.136  Sum_probs=51.8

Q ss_pred             CccCCCCCCCCCHHH-HHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMR-AIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~-~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|..||.+.+... .+..+........ ..+..++.++++||.+||..||.+||++.++++|||+....
T Consensus       243 ll~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          243 LLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             HHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             HHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            578999998766544 4444544432221 11356799999999999999999999999999999998644

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=98.69  E-value=9.8e-09  Score=74.91  Aligned_cols=62  Identities=18%  Similarity=0.298  Sum_probs=52.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |+| |++||.+.+..+++..+..+..+..  |..+++++++|+.+|+..||.+||++.++.  .+++
T Consensus       223 llt~G~~Pf~~~~~~~~~~~i~~~~~~~~--p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~  285 (299)
T 4asz_A          223 IFTYGKQPWYQLSNNEVIECITQGRVLQR--PRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQ  285 (299)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHH
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHcCCCCCC--CccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHH
Confidence            456 9999999999998888877654444  677899999999999999999999999984  4554

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=98.69  E-value=3.8e-09  Score=79.53  Aligned_cols=68  Identities=21%  Similarity=0.324  Sum_probs=51.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--C-----------------CCCCC-------CCCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--P-----------------PPSFR-------EPDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~-----------------~~~~~-------~~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|++||.+.+..+.+..+...  .                 .+...       .+...++++++||.+||..||.+||
T Consensus       235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  314 (383)
T 3eb0_A          235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI  314 (383)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence            57899999998877666555320  0                 00000       1345789999999999999999999


Q ss_pred             CHHhhhcCcccccC
Q psy3254          55 TASEMLNHEFIQVS   68 (177)
Q Consensus        55 ~~~~~l~h~~~~~~   68 (177)
                      |+.+++.|||+...
T Consensus       315 t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          315 NPYEAMAHPFFDHL  328 (383)
T ss_dssp             CHHHHHTSGGGHHH
T ss_pred             CHHHHhcCHHHHHH
Confidence            99999999999753

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.69  E-value=1.4e-08  Score=73.59  Aligned_cols=69  Identities=23%  Similarity=0.339  Sum_probs=50.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CC---------------CCCCC---------CCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PP---------------PSFRE---------PDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~---------------~~~~~---------~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|++||.+.+..+.+.++...  .+               +.+..         ...++.++++||.+||..||.+||
T Consensus       197 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  276 (299)
T 2r3i_A          197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI  276 (299)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCC
Confidence            57899999998876665544321  00               00100         124689999999999999999999


Q ss_pred             CHHhhhcCcccccCC
Q psy3254          55 TASEMLNHEFIQVSP   69 (177)
Q Consensus        55 ~~~~~l~h~~~~~~~   69 (177)
                      ++.+++.|+|++...
T Consensus       277 t~~~~l~hp~~~~~~  291 (299)
T 2r3i_A          277 SAKAALAHPFFQDVT  291 (299)
T ss_dssp             CHHHHHTSGGGTTCC
T ss_pred             CHHHHhcChhhhcCC
Confidence            999999999998644

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.69  E-value=6.9e-09  Score=78.01  Aligned_cols=67  Identities=21%  Similarity=0.182  Sum_probs=56.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA----SEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~----~~~l~h~~~~~~~~   70 (177)
                      |++|.+||.+.+..+.+.+|...   .+..+..++.+++++|.+||..||.+|+++    .+++.|+|+....+
T Consensus       232 ll~G~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w  302 (373)
T 2r5t_A          232 MLYGLPPFYSRNTAEMYDNILNK---PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINW  302 (373)
T ss_dssp             HHHSSCTTCCSBHHHHHHHHHHS---CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCH
T ss_pred             HHcCCCCCCCCCHHHHHHHHHhc---ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCH
Confidence            57899999999988888888765   233356789999999999999999999986    68999999986543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.68  E-value=1e-08  Score=76.81  Aligned_cols=69  Identities=20%  Similarity=0.252  Sum_probs=51.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--C-------------------------CCCC-CCCCCCCHHHHHHHHHhcccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--P-------------------------PPSF-REPDVWTPEFIDFVSRCLVKNPEE   52 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~-------------------------~~~~-~~~~~~s~~~~~~i~~~l~~~p~~   52 (177)
                      |++|++||.+.+..+.+.++...  .                         ...+ ..+..+++++++||.+||..||.+
T Consensus       235 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  314 (371)
T 4exu_A          235 MLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK  314 (371)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTT
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhh
Confidence            57899999998876665544320  0                         0000 002356899999999999999999


Q ss_pred             CCCHHhhhcCcccccCC
Q psy3254          53 RATASEMLNHEFIQVSP   69 (177)
Q Consensus        53 R~~~~~~l~h~~~~~~~   69 (177)
                      ||++.++++|||+....
T Consensus       315 Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          315 RLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             SCCHHHHHTSGGGTTTC
T ss_pred             cCCHHHHhcCcccccCC
Confidence            99999999999998543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=98.68  E-value=2.3e-08  Score=74.90  Aligned_cols=70  Identities=21%  Similarity=0.299  Sum_probs=51.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC--CC-------------------------CCCC-CCCCCCCHHHHHHHHHhcccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT--KP-------------------------PPSF-REPDVWTPEFIDFVSRCLVKNPEE   52 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~--~~-------------------------~~~~-~~~~~~s~~~~~~i~~~l~~~p~~   52 (177)
                      |++|++||.+.+..+.+.+|..  +.                         ...+ ......++++++|+.+||..||.+
T Consensus       219 ll~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~  298 (367)
T 1cm8_A          219 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ  298 (367)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhH
Confidence            5789999999887665554432  00                         0111 112456899999999999999999


Q ss_pred             CCCHHhhhcCcccccCCC
Q psy3254          53 RATASEMLNHEFIQVSPG   70 (177)
Q Consensus        53 R~~~~~~l~h~~~~~~~~   70 (177)
                      |+++.+++.|||+.....
T Consensus       299 R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          299 RVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             SCCHHHHHHSGGGTTTC-
T ss_pred             CCCHHHHhcChHHHhhcC
Confidence            999999999999986543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=98.68  E-value=6.9e-09  Score=77.54  Aligned_cols=38  Identities=18%  Similarity=0.330  Sum_probs=34.6

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      ..++.++++||.+||..||.+||++.++++|||+....
T Consensus       284 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  321 (364)
T 3qyz_A          284 PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  321 (364)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhcc
Confidence            35689999999999999999999999999999998653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.68  E-value=1.7e-08  Score=74.91  Aligned_cols=70  Identities=17%  Similarity=0.249  Sum_probs=51.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CC--CCCC---------------------CCCCCCHHHHHHHHHhcccCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PP--PSFR---------------------EPDVWTPEFIDFVSRCLVKNPEERAT   55 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~--~~~~---------------------~~~~~s~~~~~~i~~~l~~~p~~R~~   55 (177)
                      |++|.+||.+.+..+.+.++...  .+  ..+.                     .....+.++++||.+||..||.+||+
T Consensus       206 ll~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  285 (346)
T 1ua2_A          206 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  285 (346)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence            46899999998877666554321  00  0000                     01345789999999999999999999


Q ss_pred             HHhhhcCcccccCCC
Q psy3254          56 ASEMLNHEFIQVSPG   70 (177)
Q Consensus        56 ~~~~l~h~~~~~~~~   70 (177)
                      +.++++|+|+.....
T Consensus       286 ~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          286 ATQALKMKYFSNRPG  300 (346)
T ss_dssp             HHHHHTSGGGTSSSC
T ss_pred             HHHHhcChhhhcCCC
Confidence            999999999986543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=98.67  E-value=9.2e-09  Score=75.01  Aligned_cols=37  Identities=22%  Similarity=0.430  Sum_probs=34.3

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      .++.++.+||.+||..||.+|||+.++++|||++...
T Consensus       256 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          256 NISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             TCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhcc
Confidence            5789999999999999999999999999999998654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.67  E-value=2.1e-08  Score=73.50  Aligned_cols=69  Identities=22%  Similarity=0.212  Sum_probs=51.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC----C--------------------CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK----P--------------------PPSFREPDVWTPEFIDFVSRCLVKNPEERATA   56 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~----~--------------------~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~   56 (177)
                      |++|++||.+.+..+.+.++...    .                    .+....+..++..+++||.+||..||.+||++
T Consensus       212 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  291 (326)
T 1blx_A          212 MFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA  291 (326)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCH
Confidence            47899999998876655444310    0                    00001124578999999999999999999999


Q ss_pred             HhhhcCcccccCC
Q psy3254          57 SEMLNHEFIQVSP   69 (177)
Q Consensus        57 ~~~l~h~~~~~~~   69 (177)
                      .+++.|+|+....
T Consensus       292 ~e~l~hp~~~~~~  304 (326)
T 1blx_A          292 YSALSHPYFQDLE  304 (326)
T ss_dssp             HHHHTSGGGTTCC
T ss_pred             HHHhcCccccccc
Confidence            9999999998654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.67  E-value=9.3e-09  Score=76.60  Aligned_cols=40  Identities=45%  Similarity=0.827  Sum_probs=35.6

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      ..++.++++||.+||..||.+||++.+++.|||+......
T Consensus       295 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  334 (360)
T 3eqc_A          295 GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE  334 (360)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHHS
T ss_pred             ccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchHh
Confidence            4578999999999999999999999999999999865433

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.67  E-value=1.3e-08  Score=75.59  Aligned_cols=66  Identities=20%  Similarity=0.330  Sum_probs=49.7

Q ss_pred             CccCCCCCCCC---------CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH------HhhhcCccc
Q psy3254           1 MAEGKPPYGDI---------HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA------SEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~------~~~l~h~~~   65 (177)
                      |++|++||...         +.......+... .+.+  |..+|.+++++|.+||..||.+|+++      .+++.|||+
T Consensus       203 ll~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f  279 (345)
T 3a8x_A          203 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  279 (345)
T ss_dssp             HHHSSCTTTTTTC-------CHHHHHHHHHHC-CCCC--CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred             HHhCCCCcCCcccccccccccHHHHHHHHHcC-CCCC--CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence            57899999752         233344444433 2233  66789999999999999999999995      799999999


Q ss_pred             ccCC
Q psy3254          66 QVSP   69 (177)
Q Consensus        66 ~~~~   69 (177)
                      ....
T Consensus       280 ~~~~  283 (345)
T 3a8x_A          280 RNVD  283 (345)
T ss_dssp             TTCC
T ss_pred             CCCC
Confidence            8654

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.67  E-value=1.2e-08  Score=75.45  Aligned_cols=65  Identities=25%  Similarity=0.462  Sum_probs=54.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+....+...   .+..+..++.+++++|.+||..||.+||++.+++.|+|+...
T Consensus       234 l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          234 LLVGKPPFETSCLKETYLRIKKN---EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHT---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHHCcCCCCCCCHHHHHHHHhcC---CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence            57899999998877776666554   223356789999999999999999999999999999999754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.67  E-value=2.5e-08  Score=74.17  Aligned_cols=69  Identities=22%  Similarity=0.306  Sum_probs=51.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC---------------------------CCCCCC-CCCCCCCHHHHHHHHHhcccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT---------------------------KPPPSF-REPDVWTPEFIDFVSRCLVKNPEE   52 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~---------------------------~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~   52 (177)
                      |++|++||.+.+..+.+..+..                           .....+ ..+...++++++||.+||..||.+
T Consensus       217 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~  296 (353)
T 3coi_A          217 MLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK  296 (353)
T ss_dssp             HHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCccc
Confidence            5789999998876655443321                           111111 112457999999999999999999


Q ss_pred             CCCHHhhhcCcccccCC
Q psy3254          53 RATASEMLNHEFIQVSP   69 (177)
Q Consensus        53 R~~~~~~l~h~~~~~~~   69 (177)
                      ||++.+++.|||+....
T Consensus       297 Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          297 RLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             SCCHHHHHTSGGGTTTC
T ss_pred             CCCHHHHhcCcchhhcc
Confidence            99999999999997543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.67  E-value=1.3e-08  Score=75.02  Aligned_cols=68  Identities=18%  Similarity=0.194  Sum_probs=49.5

Q ss_pred             CccCCCCCCCCC-------HHHHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIH-------PMRAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~-------~~~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+       ..+.+.++..+..... ..+..+|.++++||.+||..||.+||++.+++.|+|++..
T Consensus       202 ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          202 MLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             HHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             HHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence            478999998753       3455566655432111 1113579999999999999999999999999999999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.66  E-value=1.5e-08  Score=73.44  Aligned_cols=70  Identities=34%  Similarity=0.670  Sum_probs=49.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCC-------CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSF-------REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPG   70 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~-------~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~   70 (177)
                      |++|++||.+.+....+........+..       .....++.+++++|.+||..||.+||++.++++|+|+.....
T Consensus       220 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          220 LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             HHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             HHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence            4789999998776554433333322221       112457899999999999999999999999999999986443

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.66  E-value=3.8e-09  Score=79.50  Aligned_cols=33  Identities=27%  Similarity=0.448  Sum_probs=30.2

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          36 PEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        36 ~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      .++++||.+||..||.+|||+.++|+|||+...
T Consensus       347 ~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          347 LKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             HHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence            478999999999999999999999999999753

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=98.66  E-value=5.5e-09  Score=77.78  Aligned_cols=66  Identities=26%  Similarity=0.260  Sum_probs=49.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+ .+.+..+..+..... ..+..++.++++||.+||..||.+||++.++++|+|+..
T Consensus       226 ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          226 LLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             HHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            578999998853 444445544422111 112467999999999999999999999999999999975

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=98.66  E-value=1.7e-08  Score=74.98  Aligned_cols=68  Identities=25%  Similarity=0.455  Sum_probs=49.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC---CCCCCCCCCC---------------------------CCCHHHHHHHHHhcccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT---KPPPSFREPD---------------------------VWTPEFIDFVSRCLVKNP   50 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~---~~~~~~~~~~---------------------------~~s~~~~~~i~~~l~~~p   50 (177)
                      |++|.+||.+.+....+..+..   ..++... +.                           ..++++++||.+||..||
T Consensus       222 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  300 (351)
T 3mi9_A          222 MWTRSPIMQGNTEQHQLALISQLCGSITPEVW-PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP  300 (351)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS-TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSG
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChhhc-cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCCh
Confidence            5789999999887665554432   1111110 10                           026789999999999999


Q ss_pred             CCCCCHHhhhcCcccccCC
Q psy3254          51 EERATASEMLNHEFIQVSP   69 (177)
Q Consensus        51 ~~R~~~~~~l~h~~~~~~~   69 (177)
                      .+||++.++++|+|+....
T Consensus       301 ~~R~t~~e~l~hp~f~~~~  319 (351)
T 3mi9_A          301 AQRIDSDDALNHDFFWSDP  319 (351)
T ss_dssp             GGSCCHHHHHTSGGGGSSS
T ss_pred             hhCCCHHHHhCCCCcCCCC
Confidence            9999999999999998643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.65  E-value=7.6e-09  Score=79.11  Aligned_cols=35  Identities=31%  Similarity=0.631  Sum_probs=31.6

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      .+++++|||.+||..||.+|||+.|+++|||+...
T Consensus       381 ~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          381 DDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             chHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence            37889999999999999999999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.65  E-value=1.3e-08  Score=77.02  Aligned_cols=67  Identities=19%  Similarity=0.305  Sum_probs=49.7

Q ss_pred             CccCCCCCCCC---------CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH------HhhhcCccc
Q psy3254           1 MAEGKPPYGDI---------HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA------SEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~------~~~l~h~~~   65 (177)
                      |++|++||...         ........+... .+.+  |..+|.++++||++||..||.+|+++      .+++.||||
T Consensus       246 ll~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff  322 (396)
T 4dc2_A          246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  322 (396)
T ss_dssp             HHHSSCSSTTTTC------CCHHHHHHHHHHC-CCCC--CTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred             HHhCCCCCcccccccccchhhHHHHHHHHhcc-ccCC--CCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence            57899999643         122233444333 2233  67789999999999999999999985      799999999


Q ss_pred             ccCCC
Q psy3254          66 QVSPG   70 (177)
Q Consensus        66 ~~~~~   70 (177)
                      ....+
T Consensus       323 ~~i~w  327 (396)
T 4dc2_A          323 RNVDW  327 (396)
T ss_dssp             TTCCH
T ss_pred             cCCCH
Confidence            86543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.64  E-value=1.1e-08  Score=78.05  Aligned_cols=70  Identities=23%  Similarity=0.218  Sum_probs=51.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--------------C--CCCCC----------CCCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--------------P--PPSFR----------EPDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--------------~--~~~~~----------~~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|++||.+.+..+.+.+|...              .  ...+.          .+...++++++||.+||..||.+|+
T Consensus       250 ll~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~  329 (420)
T 1j1b_A          250 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL  329 (420)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCC
Confidence            57899999998876655444320              0  01110          1234689999999999999999999


Q ss_pred             CHHhhhcCcccccCCC
Q psy3254          55 TASEMLNHEFIQVSPG   70 (177)
Q Consensus        55 ~~~~~l~h~~~~~~~~   70 (177)
                      ++.+++.|+|+.....
T Consensus       330 t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          330 TPLEACAHSFFDELRD  345 (420)
T ss_dssp             CHHHHHTSGGGGGGGC
T ss_pred             CHHHHhCCHhhccccc
Confidence            9999999999986543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.64  E-value=1.9e-08  Score=73.46  Aligned_cols=67  Identities=25%  Similarity=0.536  Sum_probs=49.4

Q ss_pred             CccCCCCCCCCC-HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIH-PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.. ....+..+.... .....+...+.+++++|.+||..||.+||++.+++.|+|+...
T Consensus       232 l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          232 MTYGKTPFQQIINQISKLHAIIDPN-HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             HHHSSCTTTTCCSHHHHHHHHHCTT-SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             HHhCCCchhhHHHHHHHHHHHHhcc-cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence            478999998764 333333333221 1222255668999999999999999999999999999999854

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.64  E-value=2.2e-08  Score=72.75  Aligned_cols=69  Identities=23%  Similarity=0.281  Sum_probs=46.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC---CCCCCCCC--CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT---KPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~---~~~~~~~~--~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+.......+..   .....+..  +..++.+++++|.+||..||.+||++.++++|||+....
T Consensus       191 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          191 LLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             HHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             HHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            5789999988765444322221   11112211  146799999999999999999999999999999998643

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.64  E-value=1.8e-08  Score=74.90  Aligned_cols=71  Identities=23%  Similarity=0.198  Sum_probs=51.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CCC--------------C-------------CCCCCCCCHHHHHHHHHhcccCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PPP--------------S-------------FREPDVWTPEFIDFVSRCLVKNPE   51 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~~--------------~-------------~~~~~~~s~~~~~~i~~~l~~~p~   51 (177)
                      |++|++||.+.+....+..+...  .++              .             ...+...+.++++||.+||..||.
T Consensus       225 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  304 (360)
T 3e3p_A          225 MMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPE  304 (360)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGG
T ss_pred             HHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCcc
Confidence            57899999998876666554320  000              0             001123578999999999999999


Q ss_pred             CCCCHHhhhcCcccccCCCC
Q psy3254          52 ERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus        52 ~R~~~~~~l~h~~~~~~~~~   71 (177)
                      +||++.++++|||+......
T Consensus       305 ~Rpt~~e~l~hp~f~~~~~~  324 (360)
T 3e3p_A          305 ERMKPYEALCHPYFDELHDP  324 (360)
T ss_dssp             GSCCHHHHTTSGGGGGGGCT
T ss_pred             ccCCHHHHhcCccccccCCc
Confidence            99999999999999875443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.63  E-value=1.1e-08  Score=76.69  Aligned_cols=68  Identities=13%  Similarity=0.021  Sum_probs=48.6

Q ss_pred             CccCCCCCCCCCHHH--HHhhC----cCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMR--AIFMI----PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~--~~~~i----~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+...  ....+    .......+..+..++.++++||.+||..||.+||++.++++|||+...
T Consensus       286 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          286 VWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             HHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             HHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence            578999998874321  11111    011222333335789999999999999999999999999999999753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.63  E-value=9.9e-09  Score=76.93  Aligned_cols=69  Identities=19%  Similarity=0.294  Sum_probs=50.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC---------------------------CCCCCC-CCCCCCHHHHHHHHHhcccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK---------------------------PPPSFR-EPDVWTPEFIDFVSRCLVKNPEE   52 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~---------------------------~~~~~~-~~~~~s~~~~~~i~~~l~~~p~~   52 (177)
                      |++|++||.+.+....+..|...                           ....+. .....+++++|||.+||..||.+
T Consensus       223 ll~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~  302 (367)
T 2fst_X          223 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK  302 (367)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCccc
Confidence            57899999998876555444320                           000000 01245899999999999999999


Q ss_pred             CCCHHhhhcCcccccCC
Q psy3254          53 RATASEMLNHEFIQVSP   69 (177)
Q Consensus        53 R~~~~~~l~h~~~~~~~   69 (177)
                      |+++.+++.|||+....
T Consensus       303 R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          303 RITAAQALAHAYFAQYH  319 (367)
T ss_dssp             SCCHHHHHTSGGGTTTC
T ss_pred             CcCHHHHhcChhhhhcc
Confidence            99999999999998643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=98.63  E-value=2.1e-08  Score=73.49  Aligned_cols=60  Identities=17%  Similarity=0.266  Sum_probs=51.1

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |.+||.+.+..+++..+..+..++.  |..++.++++++.+|+..||.+||++.+++.+
T Consensus       240 l~t~g~~Pf~~~~~~~~~~~i~~~~~~~~--p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          240 VFSYGLQPYCGYSNQDVVEMIRNRQVLPC--PDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHTTTCCTTTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCC--cccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            356 8999999999888888877654443  67789999999999999999999999998764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.63  E-value=6.7e-09  Score=76.55  Aligned_cols=67  Identities=24%  Similarity=0.479  Sum_probs=49.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC---------------------CCCCCC-------CCCCCCHHHHHHHHHhcccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK---------------------PPPSFR-------EPDVWTPEFIDFVSRCLVKNPEE   52 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~---------------------~~~~~~-------~~~~~s~~~~~~i~~~l~~~p~~   52 (177)
                      |++|++||.+.+..+.+..+...                     ..+...       ....++.++++||.+||..||.+
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  297 (331)
T 4aaa_A          218 MFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK  297 (331)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCccc
Confidence            57899999998766555443210                     000110       01256899999999999999999


Q ss_pred             CCCHHhhhcCccccc
Q psy3254          53 RATASEMLNHEFIQV   67 (177)
Q Consensus        53 R~~~~~~l~h~~~~~   67 (177)
                      ||++.++++|+|++.
T Consensus       298 Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          298 RPFCAELLHHDFFQM  312 (331)
T ss_dssp             SCCGGGGGGSHHHHG
T ss_pred             CCCHHHHhcCchhcc
Confidence            999999999999975

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.62  E-value=4e-09  Score=81.48  Aligned_cols=33  Identities=30%  Similarity=0.588  Sum_probs=31.1

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      +++++|||.+||..||.+|+|+.++++|||+..
T Consensus       329 s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            567999999999999999999999999999974

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.62  E-value=1.6e-08  Score=77.50  Aligned_cols=73  Identities=15%  Similarity=0.153  Sum_probs=57.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCC-CCCCCCHHHHHHHHHhcccCCCC--CCCHHhhhcCcccccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFR-EPDVWTPEFIDFVSRCLVKNPEE--RATASEMLNHEFIQVSPGGNI   73 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~-~~~~~s~~~~~~i~~~l~~~p~~--R~~~~~~l~h~~~~~~~~~~~   73 (177)
                      |++|++||.+.+..+.+.+|.... ...++ .+..+|++++|||++||..+|.+  |++++++++|||+....+..+
T Consensus       274 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~l  350 (437)
T 4aw2_A          274 MLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNI  350 (437)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTTG
T ss_pred             HHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHHH
Confidence            578999999999888888776531 11221 12458999999999999988888  999999999999987665544

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.62  E-value=7.3e-09  Score=77.79  Aligned_cols=60  Identities=8%  Similarity=-0.057  Sum_probs=44.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.+.......+...       +..+++++++||.+||..||.+||++.++++|+|+..
T Consensus       306 lltg~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          306 IWCADLPITKDAALGGSEWIFRS-------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             HHHSSCCC------CCSGGGGSS-------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             HHHCCCCCcccccccchhhhhhh-------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            57899999887654433333222       3567899999999999999999999999999999975

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=98.61  E-value=7.2e-09  Score=75.65  Aligned_cols=69  Identities=25%  Similarity=0.388  Sum_probs=51.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC------------------------C---CCCCCCCCHHHHHHHHHhcccCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP------------------------S---FREPDVWTPEFIDFVSRCLVKNPEER   53 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~------------------------~---~~~~~~~s~~~~~~i~~~l~~~p~~R   53 (177)
                      |++|++||.+.+..+.+.++....+.                        .   ...+..++.++++||.+||..||.+|
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  297 (320)
T 2i6l_A          218 MLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR  297 (320)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCcccc
Confidence            57899999998876665544321100                        0   00124579999999999999999999


Q ss_pred             CCHHhhhcCcccccCC
Q psy3254          54 ATASEMLNHEFIQVSP   69 (177)
Q Consensus        54 ~~~~~~l~h~~~~~~~   69 (177)
                      |++.++++|||+....
T Consensus       298 pt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          298 LTAEEALSHPYMSIYS  313 (320)
T ss_dssp             CCHHHHHTSHHHHTTC
T ss_pred             CCHHHHhCCccccccc
Confidence            9999999999998643

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=98.61  E-value=4.5e-08  Score=70.80  Aligned_cols=36  Identities=25%  Similarity=0.285  Sum_probs=33.5

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      .++.++++||.+||..||.+|||+.++++|||+...
T Consensus       254 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             ccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence            468999999999999999999999999999999853

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=98.60  E-value=1.4e-08  Score=73.31  Aligned_cols=67  Identities=34%  Similarity=0.668  Sum_probs=48.0

Q ss_pred             CccCCCCCCCCCHH-HHHhhC-cCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMI-PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i-~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+.. ...... .....+.+  +..++.+++++|.+||..||.+||++.+++.|+|+....
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          218 MATGKPPFYELGEPQAAMFKVGMFKVHPEI--PESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             HHHTSCTTGGGSSHHHHHHHHHHHCCCCCC--CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             HHHCCCCccCCCchhHHHHhhccccccccc--cccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            46899999765322 222221 11222233  567899999999999999999999999999999998643

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=98.60  E-value=8e-09  Score=78.75  Aligned_cols=67  Identities=22%  Similarity=0.284  Sum_probs=48.0

Q ss_pred             CccCCCCCCCCCHH-HHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.... .....+..+..... ..+..++.++++||.+||..||.+||++.++++|||++.
T Consensus       337 lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          337 CLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             HHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            57899999875432 22222323321111 112467999999999999999999999999999999974

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.60  E-value=4.6e-08  Score=74.49  Aligned_cols=73  Identities=22%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCC-CCCCCCHHHHHHHHHhcccCCCCC---CCHHhhhcCcccccCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFR-EPDVWTPEFIDFVSRCLVKNPEER---ATASEMLNHEFIQVSPGGNIP   74 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~-~~~~~s~~~~~~i~~~l~~~p~~R---~~~~~~l~h~~~~~~~~~~~~   74 (177)
                      |++|++||.+.+..+.+.+|.... ...++ .+..+|.++++||++||. +|.+|   +++++++.||||....+..+.
T Consensus       263 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l~  340 (412)
T 2vd5_A          263 MFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGLR  340 (412)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTST
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHHh
Confidence            578999999999888887776531 11221 135689999999999999 99988   589999999999877666543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.59  E-value=2.3e-08  Score=71.88  Aligned_cols=69  Identities=22%  Similarity=0.246  Sum_probs=54.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPS-FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+..+.+.++....... ...+...+..+++++.+||..||.+||++.+++.|+|++...
T Consensus       204 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          204 LLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             HHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            478999999988877776665442211 111246789999999999999999999999999999998643

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.57  E-value=6.1e-08  Score=69.59  Aligned_cols=63  Identities=21%  Similarity=0.367  Sum_probs=45.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+|+........   +..+..+.+  |..++.+++++|.+||..||.+||++.++++|+|+...
T Consensus       224 l~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          224 AAGAEPLPRNGDQWHE---IRQGRLPRI--PQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             HTTCCCCCSSSHHHHH---HHTTCCCCC--SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             HhcCCCCCcchhHHHH---HHcCCCCCC--CcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            4678877766543332   233333333  56789999999999999999999999999999999854

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.55  E-value=4.4e-08  Score=72.60  Aligned_cols=40  Identities=35%  Similarity=0.490  Sum_probs=35.7

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      ..+++++++||.+||..||.+||++.++++|+|++.....
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          276 PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             ccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence            3578999999999999999999999999999999865443

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.55  E-value=4.4e-08  Score=71.98  Aligned_cols=69  Identities=29%  Similarity=0.608  Sum_probs=49.9

Q ss_pred             CccCCCCCCCCCH-HHHHhhCcCCCCCCCCC--CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHP-MRAIFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~-~~~~~~i~~~~~~~~~~--~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|..||.+.+. .+.+..+..+..+.+..  +..++.++++||.+||..||.+||++.++++|+|+....
T Consensus       222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          222 LATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             HHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence            4789999988653 34445555554444422  245799999999999999999999999999999997543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.54  E-value=9.1e-09  Score=77.15  Aligned_cols=33  Identities=30%  Similarity=0.526  Sum_probs=31.0

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      +.++++||.+||..||.+|||+.++++|||+..
T Consensus       292 ~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          292 ASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence            568999999999999999999999999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.53  E-value=3.2e-08  Score=73.20  Aligned_cols=68  Identities=21%  Similarity=0.194  Sum_probs=42.7

Q ss_pred             CccCCCCCCCCCHHHHH----hhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAI----FMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~----~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+.....    ..+.... ......+..++.++++||.+||..||.+||++.++++|||+...
T Consensus       222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          222 LLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             HHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             HHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            47899999876543321    1221111 11111135679999999999999999999999999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.52  E-value=6.2e-08  Score=73.39  Aligned_cols=37  Identities=14%  Similarity=0.304  Sum_probs=33.5

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      +.++++||.+||..||.+|||+.++|+||||......
T Consensus       307 ~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~  343 (405)
T 3rgf_A          307 DSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLP  343 (405)
T ss_dssp             TSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCC
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCC
Confidence            7889999999999999999999999999999865433

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.51  E-value=3.9e-08  Score=73.22  Aligned_cols=36  Identities=22%  Similarity=0.457  Sum_probs=33.5

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      ..++.+++||.+||..||.+||++.++++|||++..
T Consensus       288 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          288 TADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence            468999999999999999999999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.51  E-value=4.1e-08  Score=73.08  Aligned_cols=32  Identities=31%  Similarity=0.601  Sum_probs=30.0

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      ++.+.+||.+||..||.+||++.++++|||++
T Consensus       329 ~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          329 HELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            47788999999999999999999999999985

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.51  E-value=3.1e-08  Score=75.07  Aligned_cols=68  Identities=24%  Similarity=0.246  Sum_probs=48.3

Q ss_pred             CccCCCCCCCCCHHH----HHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMR----AIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~----~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+...    ....+..+.. .....+..+|.++++||.+||..||.+||++.+++.|+|+...
T Consensus       256 ll~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          256 LLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             HHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence            578999998764321    2222222211 1111135689999999999999999999999999999999753

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.50  E-value=9.4e-09  Score=74.72  Aligned_cols=42  Identities=29%  Similarity=0.407  Sum_probs=36.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeeccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQL  141 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~  141 (177)
                      ...++.++|..+++|++++            ++||+++.   ++.++++|||+++..
T Consensus       126 i~~~l~~lH~~~i~H~dlk------------p~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A          126 IGEAIQYLHSINIAHRDVK------------PENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             HHHHHHHHHhCCcccCCCC------------HHHEEEecCCCCCcEEEecccccccc
Confidence            4678889999999999999            66999988   788999999998654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.50  E-value=5.2e-08  Score=74.58  Aligned_cols=67  Identities=15%  Similarity=0.292  Sum_probs=47.4

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++ |.+||.+.........+..........+...+..+++||.+||..||.+||++.++++|||+..
T Consensus       222 llt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          222 VISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             HHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             HHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence            356 9999977655444333333222222212334677999999999999999999999999999953

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=98.49  E-value=6.9e-08  Score=72.84  Aligned_cols=66  Identities=20%  Similarity=0.439  Sum_probs=50.2

Q ss_pred             CccCCCCCCCC---CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDI---HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-ASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~---~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-~~~~l~h~~~~~~~   69 (177)
                      |++|.+||...   +..+....+...   ....|..+|.++++||.+||..||.+|++ +++++.|+|+....
T Consensus       210 lltG~~Pf~~~~~~~~~~~~~~~~~~---~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          210 LLRGRRPYHIRSSTSSKEIVHTFETT---VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             HHHSSCSSCCCTTSCHHHHHHHHHHC---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             HHhCCCCCCCCCCccHHHHHHHHhhc---ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence            57899999754   333444444333   22236678999999999999999999998 89999999997643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=98.49  E-value=6.7e-08  Score=70.71  Aligned_cols=62  Identities=21%  Similarity=0.386  Sum_probs=45.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCc-CC-CCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIP-TK-PPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~-~~-~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+||++||.+.+....+..+. .+ ..|.+ ..+..++.++++||.+||..||.+|||+.+++.+
T Consensus       230 lltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          230 LMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             HHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            579999999876554444333 22 12222 2246689999999999999999999999987654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=98.48  E-value=3.9e-08  Score=73.37  Aligned_cols=60  Identities=25%  Similarity=0.412  Sum_probs=46.6

Q ss_pred             Ccc-CCCCCCCCCHHHHHhh-CcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFM-IPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~-i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |++||.+.+..+.+.+ +..+..+..  |...++++++++.+|+..||.+|||+.++++|
T Consensus       280 l~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~--p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          280 IFSLGASPYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HTTTSCCSSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            456 9999998775544443 333433333  67789999999999999999999999999987

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.48  E-value=7.9e-08  Score=71.73  Aligned_cols=37  Identities=30%  Similarity=0.438  Sum_probs=33.3

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      ..+.++++||.+||..||.+||++.++++|||+....
T Consensus       305 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          305 DEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             HHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             chHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence            3467899999999999999999999999999998653

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.48  E-value=6.9e-08  Score=70.91  Aligned_cols=34  Identities=26%  Similarity=0.512  Sum_probs=31.7

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      +.++++||.+||..||.+||++.++++|||++..
T Consensus       302 ~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          302 HERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             HHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence            5778999999999999999999999999999864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.48  E-value=9.2e-08  Score=70.73  Aligned_cols=58  Identities=17%  Similarity=0.349  Sum_probs=45.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+..      .....   ....|..++.++++||.+||..||.+||++.++++|||+..
T Consensus       223 l~~g~~pf~~~~------~~~~~---~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          223 LVFEENPFCELE------ETVEA---AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             HHHSSCSCSSGG------GGTTT---CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             HHhCCCchhhHH------HHHhh---ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence            468999997643      12222   22224568999999999999999999999999999999975

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.47  E-value=3e-08  Score=73.37  Aligned_cols=35  Identities=29%  Similarity=0.411  Sum_probs=32.1

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      +.++++||.+||..||.+||++.++++|+|+....
T Consensus       307 ~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          307 HVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             HHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence            46889999999999999999999999999998653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.47  E-value=6e-08  Score=76.70  Aligned_cols=66  Identities=21%  Similarity=0.420  Sum_probs=50.4

Q ss_pred             CccCCCCCCCCC----HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIH----PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~----~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~~   69 (177)
                      |++|.+||.+.+    .......+... +..+  |..+|+++++||.+||..||.+|+     ++.+++.|||+....
T Consensus       378 LltG~~PF~~~~~~~~~~~i~~~i~~~-~~~~--p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~  452 (576)
T 2acx_A          378 MIAGQSPFQQRKKKIKREEVERLVKEV-PEEY--SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN  452 (576)
T ss_dssp             HHHSSCSSSCSSSCCCHHHHHHHHHHC-CCCC--CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred             HHhCCCCCcccccchhHHHHHHHhhcc-cccC--CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence            578999998763    23333333322 2333  567899999999999999999999     789999999998643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.47  E-value=2.7e-08  Score=73.03  Aligned_cols=67  Identities=22%  Similarity=0.284  Sum_probs=47.1

Q ss_pred             CccCCCCCCCCCHH-HHHhhCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPM-RAIFMIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~-~~~~~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+.. .+...+..+..... ..+..++.+++++|.+||..||.+||++.+++.|+|+..
T Consensus       212 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          212 CLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             HHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             HHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            47899999775432 22222222211111 112467999999999999999999999999999999974

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=98.46  E-value=1.1e-07  Score=69.67  Aligned_cols=69  Identities=17%  Similarity=0.324  Sum_probs=49.0

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-------HHhhhcCcccccCCCC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-------ASEMLNHEFIQVSPGG   71 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-------~~~~l~h~~~~~~~~~   71 (177)
                      |++ |.+||.+.+..+....+.....+..  +..++.++++++.+||..||.+||+       +++++.|+|+......
T Consensus       232 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~  308 (323)
T 3qup_A          232 IMTRGQTPYAGIENAEIYNYLIGGNRLKQ--PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQD  308 (323)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---------
T ss_pred             HHhCCCCCccccChHHHHHHHhcCCCCCC--CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCC
Confidence            457 9999999887777776665543333  5678999999999999999999999       7777889998765443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.45  E-value=7.3e-08  Score=75.80  Aligned_cols=66  Identities=20%  Similarity=0.347  Sum_probs=50.8

Q ss_pred             CccCCCCCCCCC----HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIH----PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~----~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+    ..+....+... ...+  |..+|.++++||.+||..||.+|++     +.+++.|||+....
T Consensus       382 lltG~~PF~~~~~~~~~~~~~~~i~~~-~~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~  456 (543)
T 3c4z_A          382 MIAARGPFRARGEKVENKELKQRVLEQ-AVTY--PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS  456 (543)
T ss_dssp             HHHSSCSSCCTTCCCCHHHHHHHHHHC-CCCC--CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred             HHhCCCCCCCCccchhHHHHHHHHhhc-ccCC--CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence            578999998753    34455555443 2223  6778999999999999999999995     58999999998643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.45  E-value=6.1e-08  Score=71.21  Aligned_cols=35  Identities=29%  Similarity=0.500  Sum_probs=33.3

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      +++++++||.+||..||.+|||+.++++|||+...
T Consensus       292 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  326 (330)
T 3nsz_A          292 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  326 (330)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence            68999999999999999999999999999999864

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.42  E-value=5.5e-08  Score=73.98  Aligned_cols=60  Identities=10%  Similarity=-0.037  Sum_probs=48.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.+..+....+...       ...++.++++||.+||..||.+||++.+++.|+|++.
T Consensus       310 lltg~~Pf~~~~~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          310 IWCADLPNTDDAALGGSEWIFRS-------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             HHHSSCCCCTTGGGSCSGGGGSS-------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHCCCCCCCcchhhhHHHHHhh-------cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence            57899999887654433333222       3457899999999999999999999999999999875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=98.41  E-value=4.3e-07  Score=69.83  Aligned_cols=41  Identities=29%  Similarity=0.399  Sum_probs=36.2

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCC
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGN   72 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~   72 (177)
                      +..+++++|||.+||..||.+|+|+.++|+|||+.......
T Consensus       367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~  407 (458)
T 3rp9_A          367 PASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAE  407 (458)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCGG
T ss_pred             CCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCCc
Confidence            34689999999999999999999999999999998765443

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.40  E-value=7.1e-08  Score=70.79  Aligned_cols=59  Identities=24%  Similarity=0.339  Sum_probs=45.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||...+.  ..    ..   ....+..++.+++++|.+||..||.+||++.++++|+|++..
T Consensus       242 l~~g~~pf~~~~~--~~----~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          242 MVCGDIPFEHDEE--II----RG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             HHHSSCSCCSHHH--HH----HC---CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             HHHCCCCCCChhh--hh----cc---cccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence            4689999976432  11    11   111245689999999999999999999999999999999854

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.39  E-value=7.4e-09  Score=74.95  Aligned_cols=52  Identities=15%  Similarity=0.076  Sum_probs=43.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|+|++            |.||+++ ++.++++|||+++..             ..++|||++.
T Consensus       201 qi~~~l~~lH~~giiHrDlk------------p~NILl~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~  252 (282)
T 1zar_A          201 MILEEVAKFYHRGIVHGDLS------------QYNVLVS-EEGIWIIDFPQSVEV-------------GEEGWREILE  252 (282)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------TTSEEEE-TTEEEECCCTTCEET-------------TSTTHHHHHH
T ss_pred             HHHHHHHHHHHCCCEeCCCC------------HHHEEEE-CCcEEEEECCCCeEC-------------CCCCHHHHHH
Confidence            45788899999999999999            6699999 999999999998643             2356777764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=98.39  E-value=4.9e-07  Score=69.11  Aligned_cols=43  Identities=19%  Similarity=0.317  Sum_probs=37.5

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCCCCC
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIP   74 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~~~~   74 (177)
                      ..+++++++||.+||..||.+|+++.++++|||+........+
T Consensus       332 ~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e  374 (432)
T 3n9x_A          332 PSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE  374 (432)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred             CCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccC
Confidence            3579999999999999999999999999999999876554433

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.38  E-value=1.1e-07  Score=69.60  Aligned_cols=62  Identities=19%  Similarity=0.184  Sum_probs=44.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|..||.+.+....+.   ... ++.+  +..++.+++++|.+||..||.+||++.++++|||++.
T Consensus       248 l~~g~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          248 VACNMELPHGGEGWQQLR---QGYLPPEF--TAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHTCCCCSSHHHHHHHT---TTCCCHHH--HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHhCCCCCCCccHHHHHh---ccCCCccc--ccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            457766665544333222   221 1122  4568999999999999999999999999999999964

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.38  E-value=2.4e-07  Score=69.01  Aligned_cols=65  Identities=25%  Similarity=0.382  Sum_probs=48.9

Q ss_pred             CccCCCCCCCCC----HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIH----PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~----~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|++||...+    .......+... .+.+  +..++..+++||.+||..||.+||     ++.++++|+|+...
T Consensus       255 ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          255 LLTGASPFTVDGEKNSQAEISRRILKS-EPPY--PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             HHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCC--CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHHCCCCCccCCccchHHHHHHHHhcc-CCCC--CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            578999997542    23333333333 2222  567899999999999999999999     99999999999854

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.36  E-value=1.3e-07  Score=68.93  Aligned_cols=60  Identities=22%  Similarity=0.443  Sum_probs=45.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|+.||....  ....    .   ....+..++.+++++|.+||..||.+||++.+++.|+|++...
T Consensus       232 l~~g~~pf~~~~--~~~~----~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          232 MVCGDIPFERDQ--EILE----A---ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HHHSSCSCCSHH--HHHH----T---CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HHHCCCCCCChH--HHhh----h---ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            468999997643  2111    1   1122567899999999999999999999999999999998643

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.35  E-value=2.1e-07  Score=71.28  Aligned_cols=66  Identities=24%  Similarity=0.311  Sum_probs=44.6

Q ss_pred             Ccc-CCCCCCCCCHHHH--HhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAE-GKPPYGDIHPMRA--IFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~--~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |++ |.+||.+....+.  +.............+..++.+++++|.+||..||.+||++.++++|||+.
T Consensus       232 llt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~  300 (434)
T 2rio_A          232 ILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFW  300 (434)
T ss_dssp             HHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccC
Confidence            456 9999987653321  12111111111111123468999999999999999999999999999995

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.34  E-value=2.7e-07  Score=66.50  Aligned_cols=62  Identities=18%  Similarity=0.276  Sum_probs=50.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF   64 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~   64 (177)
                      |++ |++||.+.+..+....+..+..+.+  |..++++++++|.+||..||.+||++.+++.+.+
T Consensus       206 llt~g~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          206 ALSYGQKPYKKMKGPEVMAFIEQGKRMEC--PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHTTSCCTTTTCCTHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHcCCCCCcccCCHHHHHHHHhcCCcCCC--CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            466 9999999887777776666544444  5678999999999999999999999999997643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.33  E-value=3.4e-07  Score=65.32  Aligned_cols=60  Identities=22%  Similarity=0.330  Sum_probs=49.5

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+.....+..  +...+.++++++.+||..||.+||++.+++++
T Consensus       200 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          200 VFSEGKIPYENRSNSEVVEDISTGFRLYK--PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCCCCCCCHHHHHHHHhcCccCCC--CCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            356 9999999988888777765533333  56679999999999999999999999999875

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.32  E-value=7.8e-08  Score=72.26  Aligned_cols=32  Identities=41%  Similarity=0.609  Sum_probs=30.2

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      +.++++||.+||..||.+||++.++++|||+.
T Consensus       365 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          365 AAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             HHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             HHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence            56789999999999999999999999999986

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.31  E-value=8.1e-07  Score=64.09  Aligned_cols=59  Identities=17%  Similarity=0.251  Sum_probs=48.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.+||.+.+..+....+..+..+..  +..++.+++++|.+||..||.+||++.+++.
T Consensus       213 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          213 AFSYGQKPYRGMKGSEVTAMLEKGERMGC--PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            456 9999999888777776666544444  5678999999999999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.30  E-value=4e-07  Score=64.90  Aligned_cols=61  Identities=15%  Similarity=0.420  Sum_probs=48.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++|++||.+.+.......+..... ....+..++.++++++.+||..||.+||++.+++++
T Consensus       207 l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          207 LLTGEVPFRGIDGLAVAYGVAMNKL-ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHCCCTTTTSCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHhhhcCCC-CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            4789999999887766665544322 222256789999999999999999999999999864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.30  E-value=4.2e-07  Score=64.73  Aligned_cols=60  Identities=18%  Similarity=0.306  Sum_probs=49.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||...+.......+........  |...++.+++++.+||..||.+||++.+++++
T Consensus       198 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          198 VFSLGKMPYDLYTNSEVVLKVSQGHRLYR--PHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCccccChHHHHHHHHcCCCCCC--CCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            356 9999999988877777665543333  55679999999999999999999999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.28  E-value=5.7e-07  Score=66.03  Aligned_cols=60  Identities=20%  Similarity=0.313  Sum_probs=49.7

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+..+..+..  +..++.+++++|.+||..||.+||++.+++.+
T Consensus       234 llt~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          234 IVSLGGTPYCGMTCAELYEKLPQGYRLEK--PLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHGGGTCCCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCCCCCcHHHHHHHhhcCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            456 9999999988888777765533333  56789999999999999999999999999875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=98.27  E-value=4.6e-07  Score=67.79  Aligned_cols=64  Identities=14%  Similarity=0.215  Sum_probs=52.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |++ |.+||.+.+..+.+..+..+..+..  +..++..+++++.+||..||.+||++.+++++.+..
T Consensus       279 llt~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          279 IFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            355 9999999998888877766644333  567899999999999999999999999999886543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.27  E-value=4.8e-07  Score=66.45  Aligned_cols=64  Identities=14%  Similarity=0.215  Sum_probs=52.1

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |++ |.+||.+.+..+.+..+..+..+..  +..++..++++|.+||..||.+||++.+++.+.+..
T Consensus       238 llt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          238 IFSLGYMPYPSKSNQEVLEFVTSGGRMDP--PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHcCCCCCCCCcCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            356 9999999888777776665543333  567899999999999999999999999999987653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.27  E-value=6e-07  Score=63.82  Aligned_cols=60  Identities=22%  Similarity=0.330  Sum_probs=48.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+..+..+..  +...+..+++++.+||..||.+||++.+++.+
T Consensus       198 l~~~g~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          198 VFSEGKIPYENRSNSEVVEDISTGFRLYK--PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhccCCCCCCCCCHHHHHHHHhcCCcCCC--CccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            456 8999999888887777765533332  55679999999999999999999999999864

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.26  E-value=5.6e-07  Score=63.99  Aligned_cols=59  Identities=15%  Similarity=0.406  Sum_probs=47.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCC-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKP-PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|++||.+.+..+....+.... .+.+  +..++.++++++.+||..||.+||++.++++
T Consensus       204 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          204 LVTREVPFADLSNMEIGMKVALEGLRPTI--PPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HHHCSCTTTTSCHHHHHHHHHHSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCccccChHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            468999999988777666555332 2333  5678999999999999999999999999885

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.26  E-value=6.2e-07  Score=64.38  Aligned_cols=60  Identities=18%  Similarity=0.254  Sum_probs=49.1

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |++||.+.+..+....+........  +...+..++++|.+||..||.+||++.+++.|
T Consensus       214 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          214 IYSLGKMPYERFTNSETAEHIAQGLRLYR--PHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCccccChhHHHHHHhcccCCCC--CCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            356 9999999988877777765533333  56679999999999999999999999999876

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.25  E-value=5e-07  Score=64.89  Aligned_cols=58  Identities=17%  Similarity=0.372  Sum_probs=47.7

Q ss_pred             cCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           3 EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         3 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      +|.+||.+.+..+.+..+..+..+.+  +..+++++++++.+||..||.+||++.+++.+
T Consensus       213 ~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          213 HGVKPFQGVKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             TSCCTTTTCCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCcCCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            49999999887777776665544333  56789999999999999999999999998864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.23  E-value=1.7e-07  Score=68.41  Aligned_cols=69  Identities=20%  Similarity=0.429  Sum_probs=54.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+...++..... +....+..++.+++++|.+||..||.+||+..+.+.|+|++...
T Consensus       212 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          212 VLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             HHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence            5789999999988777665554432 22111356899999999999999999999999999999987543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.23  E-value=5.7e-07  Score=65.43  Aligned_cols=60  Identities=22%  Similarity=0.436  Sum_probs=48.1

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+.......+..+..+..  +..++++++++|.+||..||.+||++.+++.+
T Consensus       245 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          245 IVTLGGNPYPGIPPERLFNLLKTGHRMER--PDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHhhcCCcCCC--CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            456 9999999887766665555443333  56789999999999999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=98.21  E-value=9e-07  Score=65.23  Aligned_cols=60  Identities=17%  Similarity=0.315  Sum_probs=50.0

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |..||.+.+..+....+..+..+..  |..++.+++++|.+||..||.+||++.+++.+
T Consensus       269 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          269 IFSYGLQPYYGMAHEEVIYYVRDGNILAC--PENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCcCCCCChHHHHHHHhCCCcCCC--CCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            456 9999999988888877766654443  56789999999999999999999999998864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.19  E-value=1.2e-06  Score=64.06  Aligned_cols=59  Identities=15%  Similarity=0.418  Sum_probs=47.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCc-CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIP-TKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|++||.+.+..+....+. ......  .|..++++++++|.+||..||.+||++.++++
T Consensus       232 lltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          232 LATLQQPWGNLNPAQVVAAVGFKCKRLE--IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HHHCCCTTTTSCHHHHHHHHHHSCCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCCCC--CCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            478999999998877766553 222223  36778999999999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.19  E-value=1.2e-06  Score=63.09  Aligned_cols=61  Identities=16%  Similarity=0.386  Sum_probs=48.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |++||.+.+..+.+..+..... ....+..++.+++++|.+||..||.+||++.+++.+
T Consensus       217 l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          217 MFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCcccCCHHHHHHHHHccCC-CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            456 9999999988877776654432 222256789999999999999999999999999863

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.18  E-value=1.3e-06  Score=62.53  Aligned_cols=59  Identities=15%  Similarity=0.251  Sum_probs=47.5

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |++||.+.+..+....+..+..+..  +..++++++++|.+||..||.+||++.+++.
T Consensus       207 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          207 IYSFGRVPYPRIPLKDVVPRVEKGYKMDA--PDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHTTSCCSCTTSCGGGHHHHHTTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHhcCCCCCC--cccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            356 9999999887777666655533333  5678999999999999999999999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.17  E-value=7e-07  Score=64.06  Aligned_cols=60  Identities=20%  Similarity=0.377  Sum_probs=46.3

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |++||...+.......+.....+..  +..+++.++++|.+||..||.+||++.+++.+
T Consensus       207 llt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          207 ILSFGKQPFFWLENKDVIGVLEKGDRLPK--PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHTTTCCTTTTSCGGGHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCcccCChHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            456 9999988776655555544432232  56689999999999999999999999999864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.17  E-value=1.2e-06  Score=65.86  Aligned_cols=60  Identities=17%  Similarity=0.286  Sum_probs=49.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+..+..+..  +..++.+++++|.+||..||.+||++.+++++
T Consensus       286 llt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          286 IFTLGGSPYPGVPVEELFKLLKEGHRMDK--PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHTTCCCCC--CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            356 9999999988877776665544333  56789999999999999999999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=98.17  E-value=1.7e-06  Score=61.97  Aligned_cols=59  Identities=20%  Similarity=0.322  Sum_probs=47.9

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |++||.+.+..+.+..+..+..+..  +..++.++++++.+||..||.+||++.+++.
T Consensus       203 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          203 IVTHGRIPYPGMTNPEVIQNLERGYRMVR--PDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCcccCHHHHHHHHhcccCCCC--cccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            456 9999999888877776665533332  5678999999999999999999999999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=98.16  E-value=2.8e-07  Score=67.21  Aligned_cols=61  Identities=16%  Similarity=0.187  Sum_probs=42.5

Q ss_pred             CCCCCCH-HHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           7 PYGDIHP-MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         7 Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      ||.+... ...+..+.....|..  +...++.+++||.+||..||.+||++.++++|+|++...
T Consensus       226 Pf~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          226 PFSTQMERVRTLTDVRNLKFPPL--FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             CCSSHHHHHHHHHHHHTTCCCHH--HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             CCCCccHHHHHHHHHhcCCCCCC--CcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            7765432 233444444422222  234578899999999999999999999999999998643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=98.16  E-value=1.7e-06  Score=63.55  Aligned_cols=59  Identities=15%  Similarity=0.234  Sum_probs=48.9

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.+||.+.+..+....+..+..+..  +..++.++.++|..||..||.+||++.+++.
T Consensus       247 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          247 VLAYGERPYWNMTNRDVISSVEEGYRLPA--PMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHTTSCCTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCCCcccCCHHHHHHHHHcCCCCCC--CCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            356 9999999988888777765543333  5678999999999999999999999999885

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.16  E-value=1.2e-06  Score=64.06  Aligned_cols=60  Identities=17%  Similarity=0.319  Sum_probs=49.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+..+..+..  +..++..++++|.+||..||.+||++.+++.+
T Consensus       233 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          233 IATLAEQPYQGLSNEQVLRFVMEGGLLDK--PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HHHTSCCTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCccccCCHHHHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            356 8999999888777776665543333  56789999999999999999999999999875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.14  E-value=1.1e-06  Score=65.86  Aligned_cols=60  Identities=18%  Similarity=0.287  Sum_probs=48.7

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+++..+..+..+..  |..++.+++++|.+||..||.+||++.+++.+
T Consensus       298 llt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          298 IFTLGGSPYPGIPVEELFKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            456 9999999887777766655543333  56789999999999999999999999999864

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.14  E-value=1.7e-06  Score=63.05  Aligned_cols=60  Identities=18%  Similarity=0.252  Sum_probs=48.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|..||.+.+.......+..+..+... +..++.++++++.+||..||.+||++.+++.
T Consensus       236 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          236 LHAREWPFKTQPAEAIIWQMGTGMKPNLS-QIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHSSCSSSSCCHHHHHHHHHTTCCCCCC-CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHhccCCCCCCC-cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            46899999998888777766655444432 3467899999999999999999999999986

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.13  E-value=1e-06  Score=64.13  Aligned_cols=60  Identities=18%  Similarity=0.269  Sum_probs=48.3

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+..+..+..  +..++.+++++|.+||..||.+||++.+++.+
T Consensus       242 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          242 IATRGMTPYPGVQNHEMYDYLLHGHRLKQ--PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCCCC--BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCccCCHHHHHHHHHcCCCCCC--CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            457 8999999887766666655543333  56789999999999999999999999999864

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.13  E-value=1.5e-06  Score=63.97  Aligned_cols=59  Identities=15%  Similarity=0.319  Sum_probs=47.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.+||.+.+..+....+........  +..++.++.++|.+||..||.+||++.+++.
T Consensus       212 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          212 LMTFGSKPYDGIPASEISSILEKGERLPQ--PPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHTTCCCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHCCCCCCCCCCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            456 9999999877766665555433333  5678999999999999999999999999986

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=98.12  E-value=1.8e-06  Score=62.05  Aligned_cols=59  Identities=19%  Similarity=0.342  Sum_probs=46.4

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.+||.+.+.......+.....+..  +..+++++++++.+||..||.+||++.++++
T Consensus       205 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          205 IATYGMSPYPGIDLSQVYELLEKDYRMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHhccCCCCC--CCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            356 9999998877666655544433332  5678999999999999999999999999875

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.10  E-value=1.7e-06  Score=63.74  Aligned_cols=60  Identities=18%  Similarity=0.287  Sum_probs=48.4

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+..+..+..  +..++.+++++|.+||..||.+||++.+++.+
T Consensus       252 llt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          252 IFTLGGSPYPGIPVEELFKLLKEGHRMDK--PANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCcCcCCHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            356 9999999887777766655433333  56789999999999999999999999999865

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.10  E-value=2.9e-06  Score=62.49  Aligned_cols=60  Identities=12%  Similarity=0.231  Sum_probs=48.3

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |++||.+.+..+.+..+..+..+..  +..++.++++++.+||..||.+||++.+++.+
T Consensus       243 llt~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          243 VMTYGERPYWELSNHEVMKAINDGFRLPT--PMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCC--CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHcCCCCCcccCCHHHHHHHHHCCCcCCC--cccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            356 9999999888877777665533332  56789999999999999999999999998864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=98.09  E-value=2.7e-06  Score=63.85  Aligned_cols=59  Identities=14%  Similarity=0.333  Sum_probs=47.3

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.+||.+.+..+....+..+.....  |...+.++.++|.+||..||.+||++.+++.
T Consensus       308 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          308 TFSLGASPYPNLSNQQTREFVEKGGRLPC--PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHTTSCCSSTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            355 9999999887777666655543333  5678999999999999999999999999875

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=98.08  E-value=1.1e-06  Score=65.21  Aligned_cols=60  Identities=25%  Similarity=0.412  Sum_probs=44.9

Q ss_pred             Ccc-CCCCCCCCCHHHHHh-hCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIF-MIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~-~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+.+. .+..+..+..  |..++++++++|.+||..||.+||++.+++.|
T Consensus       288 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          288 IFSLGASPYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HTTTSCCSSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCccchhHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            466 999998876444333 3323322232  56789999999999999999999999999876

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.08  E-value=1.6e-06  Score=63.66  Aligned_cols=60  Identities=15%  Similarity=0.311  Sum_probs=47.3

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |++||.+.+..+....+........  +...+.++.+++.+||..||.+||++.+++.+
T Consensus       212 llt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          212 LMTFGSKPYDGIPASEISSILEKGERLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHTTCCCCC--CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHhcCCCCccCCCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            467 9999999877666555544433332  56789999999999999999999999999865

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.08  E-value=9.9e-07  Score=64.75  Aligned_cols=60  Identities=17%  Similarity=0.303  Sum_probs=47.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+.....+..  +...+.++.+++.+||..||.+||++.+++.+
T Consensus       210 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          210 LMTFGAEPYAGLRLAEVPDLLEKGERLAQ--PQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHTTSCCTTTTSCTTHHHHHHHTTCBCCC--CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHhCCCCCccccCHHHHHHHHHcCCCCCC--CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            467 9999999877666666655433333  55678899999999999999999999999876

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=98.07  E-value=2.9e-06  Score=65.21  Aligned_cols=59  Identities=20%  Similarity=0.339  Sum_probs=48.5

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |++||.+.+..+.+..+..+.....  |..++..++++|.+||..||.+||++.+++.
T Consensus       374 l~t~g~~P~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          374 LTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            356 9999999988887777765533332  5678999999999999999999999999875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.06  E-value=4.1e-07  Score=65.82  Aligned_cols=37  Identities=8%  Similarity=-0.015  Sum_probs=32.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeee
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADF  135 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~df  135 (177)
                      ....++.++|..+++|+|++            ++||+++.++.++++++
T Consensus       137 ql~~aL~~lH~~givH~Dik------------p~NIll~~~g~~kl~~~  173 (286)
T 3uqc_A          137 SLAAAADAAHRAGVALSIDH------------PSRVRVSIDGDVVLAYP  173 (286)
T ss_dssp             HHHHHHHHHHHTTCCCCCCS------------GGGEEEETTSCEEECSC
T ss_pred             HHHHHHHHHHHCCCccCCCC------------cccEEEcCCCCEEEEec
Confidence            34678889999999999999            66999999999998744

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=98.05  E-value=2.7e-06  Score=65.43  Aligned_cols=59  Identities=22%  Similarity=0.374  Sum_probs=47.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |++||.+.+..+.+..+..+...  ..|..++.++.++|.+||..||.+||++.+++.
T Consensus       378 l~t~g~~P~~~~~~~~~~~~i~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          378 IVTYGRIPYPGMSNPEVIRALERGYRM--PRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            456 99999999888777766654322  225678999999999999999999999999874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.05  E-value=1.9e-06  Score=63.63  Aligned_cols=62  Identities=15%  Similarity=0.210  Sum_probs=45.7

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHE   63 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~   63 (177)
                      |++ |.+||.+.+....+..+..... ....+...++++.++|.+||..||.+||++.+++.+-
T Consensus       267 l~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          267 IFSLGVNPYPGIPVDANFYKLIQNGF-KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             HTTTSCCSSTTCCCSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHcCCCCCcccCCcHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            466 9999988765544443333221 1222566799999999999999999999999999764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.02  E-value=6e-06  Score=66.17  Aligned_cols=59  Identities=17%  Similarity=0.251  Sum_probs=49.5

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |++||.+.+..+....+..+.....  |..++.++.++|.+||..||.+||++.+++.
T Consensus       565 llt~G~~Pf~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          565 AFSYGQKPYRGMKGSEVTAMLEKGERMGC--PAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            456 9999999998888777766654444  6678999999999999999999999999874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.01  E-value=1.6e-06  Score=63.05  Aligned_cols=61  Identities=16%  Similarity=0.310  Sum_probs=44.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+....+..+....... ..+..++.+++++|.+||..||.+||++.+++.+
T Consensus       240 llt~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          240 LFSLGSSPYPGMPVDSKFYKMIKEGFRM-LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHTTTCCSSTTCCSSHHHHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCcccchhHHHHHhccCCCC-CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            456 999998876544443333222111 2246689999999999999999999999999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.00  E-value=3.1e-06  Score=65.06  Aligned_cols=59  Identities=19%  Similarity=0.292  Sum_probs=47.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |++||.+.+..+.+..+..+..+.  .|..++++++++|.+|+..||.+||++.+++.
T Consensus       379 l~t~g~~P~~~~~~~~~~~~i~~~~~~~--~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          379 IYSFGRVPYPRIPLKDVVPRVEKGYKMD--APDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHTTTCCSSTTSCTTTHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCC--CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            356 999999887776666665553333  36678999999999999999999999999874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.00  E-value=3.6e-06  Score=60.67  Aligned_cols=60  Identities=18%  Similarity=0.429  Sum_probs=46.1

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.|||...+..+....+.....+..  +..++.++++++.+||..||.+||++.+++..
T Consensus       221 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          221 LLTRGAPPYRHIDPFDLTHFLAQGRRLPQ--PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             HHHTSCCTTTTSCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhhCCCCCCccCCHHHHHHHhhcCCCCCC--CccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            356 6777887777666665555543333  56789999999999999999999999998853

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=97.99  E-value=3.4e-06  Score=60.90  Aligned_cols=59  Identities=19%  Similarity=0.390  Sum_probs=46.0

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.+||.+.+..+....+..+.....  +..++..+.+++.+||..||.+||++.++++
T Consensus       225 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          225 LMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHTTSCCSSTTSCTTTHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCccCCHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            356 7889988876666655555543333  5667999999999999999999999999885

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=97.99  E-value=2.5e-06  Score=62.11  Aligned_cols=61  Identities=23%  Similarity=0.254  Sum_probs=44.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-CHHhhhc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-TASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-~~~~~l~   61 (177)
                      |++|++||.+.+.......+....+.....+..++.+++++|.+||..||.+|| ++++++.
T Consensus       228 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          228 CLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            468999999876654444443333222233567899999999999999999999 7888774

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=97.99  E-value=6.2e-06  Score=65.83  Aligned_cols=59  Identities=19%  Similarity=0.315  Sum_probs=48.9

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |++||.+.+..+.+..+..+.....  |..+++++.++|.+|+..||.+||++.+++.
T Consensus       532 llt~G~~Pf~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          532 ALSYGQKPYKKMKGPEVMAFIEQGKRMEC--PPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHTTSCCTTTTCCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHCCCCCCCCCCHHHHHHHHHcCCCCCC--CCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            456 9999999888888777766644333  6678999999999999999999999999753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.97  E-value=4.9e-07  Score=66.20  Aligned_cols=35  Identities=20%  Similarity=0.307  Sum_probs=32.4

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      ..+++++++|.+||..||.+||++.++++|+|++.
T Consensus       297 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          297 QKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             cCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            45788999999999999999999999999999974

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.95  E-value=3.4e-06  Score=60.61  Aligned_cols=59  Identities=20%  Similarity=0.434  Sum_probs=42.8

Q ss_pred             CccCCCCCCCCCHHHH--HhhCcC-CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDIHPMRA--IFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~--~~~i~~-~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|++||.+.+....  ...+.. ...+.+  +..++++++++|.+||..||.+||++.++++
T Consensus       221 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          221 ILTGEGPFDEYSYGKIKFINMIREEGLRPTI--PEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHSSCTTTTCCCCHHHHHHHHHHSCCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCCCccccccHHHHHHHHhccCCCCCC--CcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            4789999987653322  222222 222233  5678999999999999999999999999875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=97.95  E-value=2.4e-06  Score=62.19  Aligned_cols=60  Identities=25%  Similarity=0.399  Sum_probs=44.3

Q ss_pred             Ccc-CCCCCCCCCHHHHH-hhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAI-FMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~-~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+....+ ..+..+..+..  +...+++++++|.+||..||.+||++.+++.|
T Consensus       243 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          243 IFSLGASPYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHTTSCCSSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCcccchhHHHHHHhccCccCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            456 99999887644333 33333322232  56689999999999999999999999999876

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=97.95  E-value=2.9e-06  Score=63.66  Aligned_cols=60  Identities=18%  Similarity=0.387  Sum_probs=46.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+....+..+..+..  |..++..+.+++.+||..||.+||++.+++++
T Consensus       289 llt~~~~p~~~~~~~~~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          289 LMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHTTSCCSCTTSCSSCHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCcCCCCCCCCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            356 7999988776555555554433322  56789999999999999999999999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=97.94  E-value=8.4e-06  Score=64.01  Aligned_cols=59  Identities=20%  Similarity=0.326  Sum_probs=48.4

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |++||.+.+..+.+..+..+....  .+..++.+++++|.+||..||.+||++.+++.
T Consensus       457 l~t~g~~P~~~~~~~~~~~~i~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          457 LTTKGRVPYPGMVNREVLDQVERGYRMP--CPPECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             HTTTTCCSSTTCCHHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            466 999999998888777776553322  25678999999999999999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=97.93  E-value=6.9e-06  Score=59.77  Aligned_cols=60  Identities=17%  Similarity=0.454  Sum_probs=44.1

Q ss_pred             CccCCCCCCCCC--HHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDIH--PMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~~--~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++|++||.+.+  .......+..+..+..  +..++..++++|.+||..||.+||++.+++.+
T Consensus       196 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          196 VITRRKPFDEIGGPAFRIMWAVHNGTRPPL--IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHTCCTTTTTCSSHHHHHHHHHTTCCCCC--BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHCCCCchhhCccHHHHHHHHhcCCCCCc--ccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            578999998653  3333333434433333  46789999999999999999999999999864

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=97.92  E-value=3.3e-06  Score=61.97  Aligned_cols=61  Identities=15%  Similarity=0.294  Sum_probs=44.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+....+..+..... ....+...+.++.++|.+||..||.+||++.+++.+
T Consensus       259 l~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          259 IFSLGLNPYPGILVNSKFYKLVKDGY-QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HTTTSCCSSTTCCSSHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCCcccchhHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            456 9999988765544444332221 112255678999999999999999999999999863

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=97.92  E-value=6.6e-06  Score=66.20  Aligned_cols=58  Identities=17%  Similarity=0.344  Sum_probs=48.7

Q ss_pred             cc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           2 AE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         2 ~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      ++ |.+||.+.+..+.+..+..+..+..  |..+++.+.++|.+||..||.+||++.+++.
T Consensus       586 lt~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          586 LMHGVKPFQGVKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HTTSCCTTTTCCHHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCCCCCCCHHHHHHHHHcCCCCCC--CccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            44 9999999988888877766544443  5678999999999999999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=97.92  E-value=6.6e-06  Score=64.01  Aligned_cols=59  Identities=19%  Similarity=0.363  Sum_probs=46.7

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.+||.+.+..++...+..+...  ..|..++.+++++|.+||..||.+||++.+++.
T Consensus       412 l~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          412 IATYGMSPYPGIDLSQVYELLEKDYRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            356 99999998876666555444322  236678999999999999999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=97.90  E-value=4.5e-06  Score=60.13  Aligned_cols=61  Identities=20%  Similarity=0.422  Sum_probs=43.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCc-CCC-CCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIP-TKP-PPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~-~~~-~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|++||.+.+....+..+. .+. .+.+ ..+..++.+++++|.+||..||.+||++.+++.
T Consensus       218 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          218 LMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            468999998866544443332 221 1111 113467899999999999999999999999875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=97.88  E-value=5.2e-06  Score=59.86  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=33.5

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      +...+..++++|.+||..||.+||++.++++|+|+..
T Consensus       253 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          253 DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             cccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            3456788999999999999999999999999999974

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=97.86  E-value=1.1e-06  Score=64.30  Aligned_cols=31  Identities=6%  Similarity=0.002  Sum_probs=28.3

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcCcc
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNHEF   64 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~   64 (177)
                      ++..+.+++.+||..||.+|+++.++++|+-
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          275 LQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             HHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            3578899999999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=97.85  E-value=1.2e-05  Score=58.46  Aligned_cols=61  Identities=20%  Similarity=0.304  Sum_probs=43.7

Q ss_pred             CccCCCCCCCC--CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDI--HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~--~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++|..||.+.  +.......+.....+... +..++.+++++|.+||..||.+||++.+++.+
T Consensus       229 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          229 MAALQSPFYGDKMNLYSLCKKIEQCDYPPLP-SDHYSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHSSCTTC---CCHHHHHHHHHTTCSCCCC-TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCcccchhHHHHHHHhhcccCCCCc-ccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            46899999765  333444445444333332 35679999999999999999999999998863

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=97.82  E-value=6.7e-06  Score=66.11  Aligned_cols=34  Identities=15%  Similarity=0.151  Sum_probs=28.8

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      ++..+.++|.+||..||.+||++.+++.|+|+..
T Consensus       270 ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          270 LAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             GHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence            5789999999999999999999999999999864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=97.82  E-value=9.3e-06  Score=60.86  Aligned_cols=58  Identities=14%  Similarity=0.263  Sum_probs=45.1

Q ss_pred             cc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           2 AE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         2 ~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      ++ |++||.+.+..+....+..+....  .+..++.++.++|.+||..||.+||++.+++.
T Consensus       244 lt~g~~P~~~~~~~~~~~~i~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          244 MSYGERPYWEMSNQDVIKAVDEGYRLP--PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HTTC-CTTTTCCHHHHHHHHHTTEECC--CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHHcCCCCC--CCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            45 999999988877776665442222  24567899999999999999999999999875

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=97.77  E-value=1.3e-05  Score=57.88  Aligned_cols=66  Identities=12%  Similarity=0.212  Sum_probs=47.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSF--REPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |++|++||.+.+......+......+..  ..+..++..+.++|.+||..||.+||+..+.+.+.+..
T Consensus       205 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          205 MLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             HHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            5789999999887766655554433322  12356799999999999999999999655555555543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=97.72  E-value=4.1e-06  Score=60.37  Aligned_cols=61  Identities=15%  Similarity=0.206  Sum_probs=40.1

Q ss_pred             CccCCCCCCCCCH---HHHHhhCcCCC--CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDIHP---MRAIFMIPTKP--PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~---~~~~~~i~~~~--~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|++||.+.+.   .+.+..+....  .+....+..+++++.+++.+||..||.+||++.++++
T Consensus       208 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          208 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            5789999987432   12222222110  0000012567899999999999999999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=97.72  E-value=8.3e-06  Score=59.73  Aligned_cols=59  Identities=22%  Similarity=0.250  Sum_probs=37.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEF   64 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~   64 (177)
                      |++|.+||.+.+....+....     ....+...+..++++|.+||..||.+||++.+++.+-.
T Consensus       246 l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          246 LCFRQHPFEDGAKLRIVNGKY-----SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             HHHSSCCC------------C-----CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             HHhCCCCCcchhHHHhhcCcc-----cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            478999998765443332221     12223456788999999999999999999999998743

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=97.70  E-value=9.6e-06  Score=59.44  Aligned_cols=32  Identities=19%  Similarity=0.422  Sum_probs=29.4

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      +..++.+++++|.+||..||.+||++.+++.+
T Consensus       266 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          266 PPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            56789999999999999999999999999764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.64  E-value=2.3e-06  Score=62.38  Aligned_cols=57  Identities=16%  Similarity=0.295  Sum_probs=39.8

Q ss_pred             CccCCCCCCCC-----CHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDI-----HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++|+.||...     .......   ..  ..+..+..++.+++++|.+||..||.+||++.+++.+
T Consensus       239 l~~g~~p~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          239 MMFGEGPYDMVFQKGDSVALAVQ---NQ--LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHHSSCTTHHHHHTTSCHHHHHH---CC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCChhhhhcccchhhHHhh---cc--CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            46899999542     2222211   11  1222245679999999999999999999999999975

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.63  E-value=4.1e-06  Score=60.51  Aligned_cols=61  Identities=13%  Similarity=0.040  Sum_probs=42.5

Q ss_pred             CccCCCCCCCCCHHHHHh---hCcCCCCCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDIHPMRAIF---MIPTKPPPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~---~i~~~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++|++||.+.+..+.+.   ++.....+.. ..+..++.+++++|.+||..||.+| ++.+++..
T Consensus       195 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          195 LLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence            578999999876543221   2222221111 1135679999999999999999999 99999863

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=97.63  E-value=8.5e-06  Score=58.73  Aligned_cols=62  Identities=11%  Similarity=0.086  Sum_probs=42.4

Q ss_pred             CccCCCCCCCC---CHHHHHhhCcCCC--CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDI---HPMRAIFMIPTKP--PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~---~~~~~~~~i~~~~--~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++|++||.+.   +..+.+..+....  .+.......++.++++++.+||..||.+||++.++++.
T Consensus       211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          211 FLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            47899999874   3334443333211  11111124678999999999999999999999998753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=97.62  E-value=1.8e-06  Score=62.19  Aligned_cols=61  Identities=15%  Similarity=0.212  Sum_probs=39.9

Q ss_pred             CccCCCCCCCCCHH---HHHhhCcCCC--CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDIHPM---RAIFMIPTKP--PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~~---~~~~~i~~~~--~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|++||.+.+..   ..+..+....  .+.......++++++++|.+||..||.+||++.++++
T Consensus       208 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          208 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            46899999875321   1122221110  0000012457899999999999999999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=97.60  E-value=1.4e-05  Score=57.43  Aligned_cols=58  Identities=14%  Similarity=0.437  Sum_probs=41.1

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||...+...........  ..+  +...+.++++++.+||..||.+||++.+++.+
T Consensus       211 l~~g~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          211 ICSGGDKPLSALDSQRKLQFYEDR--HQL--PAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTT--CCC--CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCccccchHHHHHHhhcc--CCC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            456 56777776655444332222  122  44568889999999999999999999999975

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.57  E-value=3.3e-05  Score=55.67  Aligned_cols=31  Identities=19%  Similarity=0.346  Sum_probs=28.8

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |..+++++.++|.+||..||.+||++.+++.
T Consensus       254 ~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            5678999999999999999999999999875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=97.57  E-value=2.5e-05  Score=57.09  Aligned_cols=31  Identities=19%  Similarity=0.376  Sum_probs=28.8

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      +..++.++.++|.+||..||.+||++.+++.
T Consensus       273 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          273 PDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            5678999999999999999999999999984

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.57  E-value=1.6e-05  Score=56.57  Aligned_cols=42  Identities=26%  Similarity=0.214  Sum_probs=36.4

Q ss_pred             hHHHHhhhc-hhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccc
Q psy3254          88 DFEFLKFLS-YDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTD  143 (177)
Q Consensus        88 ~~~~l~~l~-~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~  143 (177)
                      ...++.++| ..+++|+|++            |.||+++.  .++++|||++.....
T Consensus       179 i~~~l~~lH~~~givHrDlk------------p~NILl~~--~~~liDFG~a~~~~~  221 (258)
T 1zth_A          179 VVENVKRLYQEAELVHADLS------------EYNIMYID--KVYFIDMGQAVTLRH  221 (258)
T ss_dssp             HHHHHHHHHHTSCEECSSCS------------TTSEEESS--SEEECCCTTCEETTS
T ss_pred             HHHHHHHHHHHCCEEeCCCC------------HHHEEEcC--cEEEEECcccccCCC
Confidence            467788999 9999999999            66999987  899999999976543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=97.46  E-value=4.3e-05  Score=55.13  Aligned_cols=31  Identities=16%  Similarity=0.433  Sum_probs=28.8

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      +..++++++++|.+||..||.+||++.++++
T Consensus       265 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          265 PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            5678999999999999999999999999875

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=97.43  E-value=5.7e-05  Score=55.94  Aligned_cols=62  Identities=11%  Similarity=0.068  Sum_probs=40.9

Q ss_pred             CccCCCCCCCCC--HHHHHhhCc--CCCCCCCC----CCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDIH--PMRAIFMIP--TKPPPSFR----EPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~~--~~~~~~~i~--~~~~~~~~----~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++|++||.+.+  .........  ......+.    .+..++.+++++|.+||..||.+||++.+++..
T Consensus       261 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          261 WLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN  330 (352)
T ss_dssp             HHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence            578999998763  222222111  11111111    113568999999999999999999999998753

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=97.43  E-value=3e-05  Score=57.27  Aligned_cols=30  Identities=10%  Similarity=0.020  Sum_probs=27.7

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      .++.+++++|.+||..||.+||++.+++..
T Consensus       293 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          293 SSCCEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             SCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             ccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            678999999999999999999999998863

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=97.29  E-value=6.7e-05  Score=54.89  Aligned_cols=27  Identities=15%  Similarity=0.252  Sum_probs=24.6

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      +.+++++|.+||..||.+||++.++++
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          285 MAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            456999999999999999999999885

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.22  E-value=3.1e-05  Score=56.93  Aligned_cols=30  Identities=17%  Similarity=0.321  Sum_probs=26.8

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhh-cCcccc
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEML-NHEFIQ   66 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l-~h~~~~   66 (177)
                      ..+|++++|||.+||.+|     |+.++| +|||++
T Consensus       306 ~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          306 KQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             hhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            346899999999999977     999999 999984

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=97.22  E-value=5.1e-05  Score=54.15  Aligned_cols=36  Identities=25%  Similarity=0.430  Sum_probs=32.0

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      +..++.+++++|.+||..||.+||++.+++.+.+.-
T Consensus       237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            456789999999999999999999999999987654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=97.21  E-value=0.00014  Score=54.79  Aligned_cols=29  Identities=7%  Similarity=0.035  Sum_probs=25.2

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      ++..+.+++.+||..||.+|+++.+++..
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          275 LQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             HHhhchHHHHHhhccChhhhccHHHHHHH
Confidence            35688999999999999999999998643

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.21  E-value=2.4e-05  Score=57.12  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=26.7

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcCc
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNHE   63 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~   63 (177)
                      .+..+.+++.+||..||.+||++.+++.+-
T Consensus       281 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          281 SLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            357889999999999999999999998763

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=97.20  E-value=0.00011  Score=53.69  Aligned_cols=31  Identities=19%  Similarity=0.346  Sum_probs=28.6

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      +..++.+++++|.+||..||.+||++.+++.
T Consensus       285 ~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          285 PDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            5678999999999999999999999999875

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=97.19  E-value=2.9e-05  Score=56.26  Aligned_cols=29  Identities=14%  Similarity=0.264  Sum_probs=25.9

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      .+..+.+++.+||..||.+||++.+++.+
T Consensus       272 ~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          272 SVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            45789999999999999999999998864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=97.13  E-value=1.6e-05  Score=57.82  Aligned_cols=31  Identities=26%  Similarity=0.525  Sum_probs=28.0

Q ss_pred             CCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          31 PDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        31 ~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      +..+++++.+++.+||..||.+||++.+++.
T Consensus       245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            4567889999999999999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.11  E-value=0.00039  Score=50.69  Aligned_cols=30  Identities=23%  Similarity=0.321  Sum_probs=27.0

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCcc
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEF   64 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~   64 (177)
                      +.++.+++.+||..||.+||++.++++|-.
T Consensus       278 ~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          278 VEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            478999999999999999999999998743

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=97.05  E-value=5.9e-05  Score=55.30  Aligned_cols=61  Identities=10%  Similarity=0.038  Sum_probs=39.4

Q ss_pred             CccCCCCCCCC---CHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDI---HPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~---~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|++||.+.   +..+.+.++.....+ .........+++++++..|+..||.+||++.++..
T Consensus       210 ll~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          210 FLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            57899999874   334444444322110 10000112349999999999999999999988775

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=97.04  E-value=0.00023  Score=51.20  Aligned_cols=28  Identities=21%  Similarity=0.382  Sum_probs=25.6

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      .+.++.+++.+||..||.+||++.++++
T Consensus       268 ~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          268 TLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             HHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            4578999999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=97.04  E-value=0.00011  Score=57.05  Aligned_cols=61  Identities=15%  Similarity=0.214  Sum_probs=40.6

Q ss_pred             CccCCCCCCCCCH---HHHHhhCcCCCC-CCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEGKPPYGDIHP---MRAIFMIPTKPP-PSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g~~Pf~~~~~---~~~~~~i~~~~~-~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++|++||.+...   .+.+.++..... ... ..+..++.++.++|..||..||.+||++.+++.
T Consensus       206 lltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          206 FLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            5789999987542   333333322110 000 002467899999999999999999999998763

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=97.01  E-value=0.00016  Score=52.61  Aligned_cols=27  Identities=19%  Similarity=0.254  Sum_probs=24.2

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254          36 PEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus        36 ~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      ..+.+++.+|+..||.+|||+.++++.
T Consensus       265 ~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          265 RVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            578899999999999999999998753

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=96.98  E-value=8e-05  Score=55.43  Aligned_cols=30  Identities=7%  Similarity=0.080  Sum_probs=27.4

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      ...+.++.+++..|+..||.+||++.+++.
T Consensus       293 ~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          293 ANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             TCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            456899999999999999999999999875

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=96.84  E-value=0.00029  Score=51.53  Aligned_cols=30  Identities=20%  Similarity=0.329  Sum_probs=26.9

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      ..+.++.++|.+||..||.+||++.+++++
T Consensus       296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          296 ECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             HHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            346779999999999999999999999875

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=96.78  E-value=0.00059  Score=49.89  Aligned_cols=27  Identities=19%  Similarity=0.306  Sum_probs=24.7

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      +.+++++|.+||..||.+||++.+++.
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~~e~l~  311 (336)
T 3g2f_A          285 VRSLKETIEDCWDQDAEARLTAQXAEE  311 (336)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHhcCChhhCcchHHHHH
Confidence            458999999999999999999999964

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	177
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-19
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-14
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-19
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-16
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-11
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-16
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-14
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-10
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-08
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-14
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-09
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-13
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-12
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-08
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-09
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-12
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	5e-11
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-11
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-09
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-11
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	8e-09
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	9e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-10
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-10
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-10
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-10
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-10
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-08
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-10
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-10
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-10
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-10
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-09
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-08
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-09
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-09
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.003
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-09
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-08
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-09
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.002
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-09
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-09
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-08
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-09
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-08
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-08
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-07
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-04

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 2e-19
 Identities = 28/76 (36%), Positives = 51/76 (67%), Gaps = 1/76 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M EG+PPY + +P+RA+++I T   P  + P+  +  F DF++RCL  + E+R +A E+L
Sbjct: 209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268

Query: 61  NHEFIQVS-PGGNIPP 75
            H+F++++ P  ++ P
Sbjct: 269 QHQFLKIAKPLSSLTP 284

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 7e-14
 Identities = 29/58 (50%), Positives = 38/58 (65%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NILL  +G  KL DFG   Q+T   +KR+T++GTP+WMAPEV+    Y    D+WSL
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (197), Expect = 3e-19
 Identities = 27/67 (40%), Positives = 42/67 (62%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MAE +PP+ +++PMR +  I    PP+  +P  W+  F DF+ +CL KN + R T S++L
Sbjct: 208 MAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 267

Query: 61  NHEFIQV 67
            H F+ V
Sbjct: 268 QHPFVTV 274

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (164), Expect = 2e-14
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 5/63 (7%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ-----EIGYDCVADM 174
            NIL   +G  KLADFGV+ + T T+ +R++ IGTP+WMAPEV+      +  YD  AD+
Sbjct: 139 GNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 198

Query: 175 WSL 177
           WSL
Sbjct: 199 WSL 201

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (178), Expect = 2e-16
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NIL+N+ G  KL DFGV+GQL D+MA  N+ +GT  +M+PE +Q   Y   +D+WS+
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQGTHYSVQSDIWSM 189

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 3e-11
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 14  MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
              +  I  +PPP      V++ EF DFV++CL+KNP ERA   +++ H FI+
Sbjct: 251 FELLDYIVNEPPPKL-PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 302

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.3 bits (177), Expect = 3e-16
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +AE KPP  +++ M A++ I     P+ +    W+  F +FV  CL K P++R T+  +L
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGH-WSEYFRNFVDSCLQKIPQDRPTSEVLL 265

Query: 61  NHEFIQ 66
            H F+ 
Sbjct: 266 KHRFVL 271

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.3 bits (151), Expect = 1e-12
 Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 7/61 (11%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG---YDCVADMWS 176
            NILL+  G  KL DFG A  +       N+ +GTP+WMAPEVI  +    YD   D+WS
Sbjct: 144 GNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWS 199

Query: 177 L 177
           L
Sbjct: 200 L 200

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 4e-16
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           MA  + PY +      I+   T          V  PE  + +  C+ +N +ER +  ++L
Sbjct: 205 MATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 264

Query: 61  NHEFIQ 66
           NH F Q
Sbjct: 265 NHAFFQ 270

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 5e-14
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 120 RNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NI +    G  K+ D G+A     + AK   VIGTP +MAPE+ +E  YD   D+++ 
Sbjct: 143 DNIFITGPTGSVKIGDLGLATLKRASFAK--AVIGTPEFMAPEMYEE-KYDESVDVYAF 198

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.6 bits (170), Expect = 2e-15
 Identities = 20/57 (35%), Positives = 35/57 (61%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+ L+ + + KL DFG+A  L    +     +GTP++M+PE +  + Y+  +D+WSL
Sbjct: 144 NVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 200

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 4e-14
 Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 2/65 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +    PP+           I          P  ++ E  + ++R L      R +  E+L
Sbjct: 207 LCALMPPFTAFSQKELAGKIREGKFRRI--PYRYSDELNEIITRMLNLKDYHRPSVEEIL 264

Query: 61  NHEFI 65
            +  I
Sbjct: 265 ENPLI 269

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.2 bits (169), Expect = 3e-15
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           N+LL + G  K+ADFG +     +  +R T+ GT  ++ PE+I+   +D   D+WSL
Sbjct: 136 NLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 190

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 6e-14
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
              GKPP+           I          PD  T    D +SR L  NP +R    E+L
Sbjct: 197 FLVGKPPFEANTYQETYKRISRVEFTF---PDFVTEGARDLISRLLKHNPSQRPMLREVL 253

Query: 61  NHEFIQ 66
            H +I 
Sbjct: 254 EHPWIT 259

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 68.2 bits (166), Expect = 1e-14
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 4/83 (4%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +  G  P+G  +    +  + +             + +  DF+ + L+ +P  R T  + 
Sbjct: 218 LLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 277

Query: 60  LNHEFIQVSPGGNIPPGPPGAPS 82
           L H ++     GN P      PS
Sbjct: 278 LEHPWLT---PGNAPGRDSQIPS 297

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 55.9 bits (134), Expect = 3e-10
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 120 RNILLNTE--GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NI+  T+     KL DFG+   L           GT  + APEV +        DMWS+
Sbjct: 153 ENIMFTTKRSNELKLIDFGLTAHLDPKQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 211

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 67.0 bits (163), Expect = 2e-14
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +  G PP+     M  + MI +        E D ++    D VSR LV  P++R TA E 
Sbjct: 208 LLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267

Query: 60  LNHEFIQ 66
           L H F Q
Sbjct: 268 LAHPFFQ 274

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 54.7 bits (131), Expect = 4e-10
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 7/64 (10%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ------EIGYDCVAD 173
            NILL+ + + KL DFG + QL     K   V GTP ++APE+I+        GY    D
Sbjct: 139 ENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVD 197

Query: 174 MWSL 177
           MWS 
Sbjct: 198 MWST 201

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 2e-14
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +  G  P+      + I  I   +           + E +DFV R LVK  + R TASE 
Sbjct: 196 LLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255

Query: 60  LNHEFIQ 66
           L H +++
Sbjct: 256 LQHPWLK 262

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 120 RNILLNT--EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NI+  T      K+ +FG A QL         +   P + APEV Q        DMWSL
Sbjct: 131 ENIIYQTRRSSTIKIIEFGQARQLKPGD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 66.2 bits (161), Expect = 4e-14
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +  G PP+ D +  +    I   +        D  +    DF+   + K+PE+R T  + 
Sbjct: 202 LLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261

Query: 60  LNHEFIQ 66
           L H +I 
Sbjct: 262 LQHPWIA 268

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.2 bits (135), Expect = 2e-10
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 92  LKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTV 151
           +K+L    + HR    +  +            L+ +    ++DFG++ ++ D  +  +T 
Sbjct: 120 VKYLHDLGIVHRDLKPENLL---------YYSLDEDSKIMISDFGLS-KMEDPGSVLSTA 169

Query: 152 IGTPFWMAPEVIQEIGYDCVADMWSL 177
            GTP ++APEV+ +  Y    D WS+
Sbjct: 170 CGTPGYVAPEVLAQKPYSKAVDCWSI 195

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 65.1 bits (158), Expect = 2e-13
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +  G  P+     +  +  +               +PE  DF+   L K P +R T  + 
Sbjct: 221 LLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280

Query: 60  LNHEFIQ 66
           L H +++
Sbjct: 281 LEHPWLK 287

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 14/65 (21%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 113 REIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA 172
            +I+              K+ DFG+A +L            T  + APE++         
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTATAEFAAPEIVDREPVGFYT 209

Query: 173 DMWSL 177
           DMW++
Sbjct: 210 DMWAI 214

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 5e-13
 Identities = 9/66 (13%), Positives = 20/66 (30%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M  G+ P+         +    +               +  + + LV+NP  R T  ++ 
Sbjct: 199 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIK 258

Query: 61  NHEFIQ 66
              +  
Sbjct: 259 KDRWYN 264

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.0 bits (145), Expect = 5e-12
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYDCVA-DMWS 176
            N+LL+   + K++DFG+A        +R  N + GT  ++APE+++   +     D+WS
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191

Query: 177 L 177
            
Sbjct: 192 C 192

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.4 bits (151), Expect = 1e-12
 Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 17/134 (12%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK-----PPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 55
           +  G PP+   H +     + T+           E    + E    +   L   P +R T
Sbjct: 206 LLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 265

Query: 56  ASEMLNHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFL--SYDDLQHRMANLDCEMER 113
            +E +NH +I       +P  P              LK     ++D++  M +    M  
Sbjct: 266 ITEFMNHPWIM--QSTKVPQTP--------LHTSRVLKEDKERWEDVKEEMTSALATMRV 315

Query: 114 EIEQLRRNILLNTE 127
           + EQ++   + +  
Sbjct: 316 DYEQIKIKKIEDAS 329

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 3e-08
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 120 RNILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
            N+L  +       KL DFG A + T       T   TP+++APEV+    YD   DMWS
Sbjct: 140 ENLLYTSKRPNAILKLTDFGFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 198

Query: 177 L 177
           L
Sbjct: 199 L 199

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 2e-12
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPT-KPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           +  G  P+        +  +               +    DF+ R LVK+P++R T  + 
Sbjct: 209 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268

Query: 60  LNHEFIQ 66
           L H +I+
Sbjct: 269 LQHPWIK 275

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 120 RNILLNTEG----HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMW 175
            NI+L          K+ DFG+A ++ D   +   + GTP ++APE++        ADMW
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKI-DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 200

Query: 176 SL 177
           S+
Sbjct: 201 SI 202

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 4e-12
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ---EIGYDCVADM 174
            NI L+ +   K+ DFG+A   +      +   + G+  WMAPEVI+   +  Y   +D+
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDV 192

Query: 175 WSL 177
           ++ 
Sbjct: 193 YAF 195

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (134), Expect = 2e-10
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK---PPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS 57
           +  G+ PY +I+    I  +  +    P   +            ++ CL K  +ER    
Sbjct: 202 LMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFP 261

Query: 58  EMLNH 62
           ++L  
Sbjct: 262 QILAS 266

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.7 bits (144), Expect = 9e-12
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NILL+ +GH K+ADFG+  +     AK NT  GTP ++APE++    Y+   D WS 
Sbjct: 132 DNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSF 189

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 5e-11
 Identities = 13/67 (19%), Positives = 22/67 (32%), Gaps = 4/67 (5%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATA-SEM 59
           M  G+ P+           I    P     P     E  D + +  V+ PE+R     ++
Sbjct: 196 MLIGQSPFHGQDEEELFHSIRMDNPFY---PRWLEKEAKDLLVKLFVREPEKRLGVRGDI 252

Query: 60  LNHEFIQ 66
             H   +
Sbjct: 253 RQHPLFR 259

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 1e-11
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +  G PP+   +       I          P+ + P+  D V + LV +  +R    EM 
Sbjct: 203 LVAGLPPFRAGNEYLIFQKIIKLEYDF---PEKFFPKARDLVEKLLVLDATKRLGCEEME 259

Query: 61  NHEFIQVSP 69
            +  ++  P
Sbjct: 260 GYGPLKAHP 268

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.7 bits (139), Expect = 4e-11
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)

Query: 121 NILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NILLN + H ++ DFG A  L+     A+ N+ +GT  +++PE++ E      +D+W+L
Sbjct: 138 NILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWAL 196

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 2e-11
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----AT 55
           M  G+ P+ +    R   +I  +       P   +PE    ++  L K+P++R     + 
Sbjct: 198 MMCGRLPFYNQDHERLFELILMEEIRF---PRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 254

Query: 56  ASEMLNHEFIQ 66
           A E++ H F  
Sbjct: 255 AKEVMEHRFFL 265

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 1e-09
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            N++L+ +GH K+ DFG+  +     A   T  GTP ++APEV+++  Y    D W L
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.6 bits (141), Expect = 3e-11
 Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 8/71 (11%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----AT 55
           M  G  P+ D + M+    I          P  +  +  D +SR + ++  +R       
Sbjct: 194 MLAGYTPFYDSNTMKTYEKILNAELR---FPPFFNEDVKDLLSRLITRDLSQRLGNLQNG 250

Query: 56  ASEMLNHEFIQ 66
             ++ NH + +
Sbjct: 251 TEDVKNHPWFK 261

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.4 bits (125), Expect = 3e-09
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NILL+  GH K+ DFG A  + D      T+ GTP ++APEV+    Y+   D WS 
Sbjct: 133 ENILLDKNGHIKITDFGFAKYVPDVT---YTLCGTPDYIAPEVVSTKPYNKSIDWWSF 187

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 3e-11
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN+L++ +  AK++DFG+  + + T    +T      W APE ++E  +   +D+WS 
Sbjct: 132 RNVLVSEDNVAKVSDFGLTKEASSTQ---DTGKLPVKWTAPEALREKKFSTKSDVWSF 186

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 9e-10
 Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
            + G+ PY  I     +  +          PD   P   + +  C   +   R +  ++ 
Sbjct: 194 YSFGRVPYPRIPLKDVVPRVEKGYKMDA--PDGCPPAVYEVMKNCWHLDAAMRPSFLQLR 251

Query: 61  NH-EFIQ 66
              E I+
Sbjct: 252 EQLEHIK 258

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 6e-11
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NIL+      K+ADFG+A  + D     R        W APE      +   +D+WS 
Sbjct: 142 ANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 200

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.3 bits (122), Expect = 8e-09
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 8/81 (9%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
             +G+ PY  +     +  +          P        D + +C  K PEER T   + 
Sbjct: 208 TTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRKEPEERPTFEYLQ 265

Query: 61  N--HEFIQVSPGGNIPPGPPG 79
               ++   +     P   PG
Sbjct: 266 AFLEDYFTSTE----PQYQPG 282

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 9e-11
 Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 5/74 (6%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE-- 58
            + G+ PY  +       M+          P     E  D ++ C   + E R   +   
Sbjct: 204 FSYGQKPYRGMKGSEVTAMLEKGERMGC--PAGCPREMYDLMNLCWTYDVENRPGFAAVE 261

Query: 59  -MLNHEFIQVSPGG 71
             L + +  V   G
Sbjct: 262 LRLRNYYYDVVNEG 275

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 120 RNILLNTEGHAKLADFGVAGQLT---DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RN+LL T+ +AK++DFG++  L    +    +        W APE I    +   +D+WS
Sbjct: 136 RNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWS 195

Query: 177 L 177
            
Sbjct: 196 F 196

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 1e-10
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 5/71 (7%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE-- 58
           ++ G+ PY  +     +  I          P    PE    +S C +   E+R       
Sbjct: 206 LSYGQKPYKKMKGPEVMAFIEQGKRMEC--PPECPPELYALMSDCWIYKWEDRPDFLTVE 263

Query: 59  -MLNHEFIQVS 68
             +   +  ++
Sbjct: 264 QRMRACYYSLA 274

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 1e-08
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTD---TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RN+LL    +AK++DFG++  L         R+       W APE I    +   +D+WS
Sbjct: 138 RNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWS 197

Query: 177 L 177
            
Sbjct: 198 Y 198

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 1e-10
 Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 2/62 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +  G  P+  +     I  I          P    P     +++C   +P  R   +E+ 
Sbjct: 203 LMHGVKPFQGVKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSRRPRFTELK 260

Query: 61  NH 62
             
Sbjct: 261 AQ 262

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-08
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNT-VIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN+L+++    KL DFG++  + D+   + +       WMAPE I    +   +D+W  
Sbjct: 137 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 195

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 1e-10
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 10/74 (13%)

Query: 1   MAEGKPPY---GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER---- 53
           +  G  P+   G+ +    I     K  P +  P   +    D + R L+K+P++R    
Sbjct: 225 LLTGASPFTVDGEKNSQAEISRRILKSEPPY--PQEMSALAKDLIQRLLMKDPKKRLGCG 282

Query: 54  -ATASEMLNHEFIQ 66
              A E+  H F Q
Sbjct: 283 PRDADEIKEHLFFQ 296

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKR-NTVIGTPFWMAPEVIQ--EIGYDCVADMWS 176
            NILL++ GH  L DFG++ +      +R     GT  +MAP++++  + G+D   D WS
Sbjct: 158 ENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWS 217

Query: 177 L 177
           L
Sbjct: 218 L 218

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 2e-10
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRN-TVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN L+      K++DFG+   + D     +        W +PEV     Y   +D+WS 
Sbjct: 130 RNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 9e-10
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
            +EGK PY +      +  I T        P + +      ++ C  + PE+R   S +L
Sbjct: 196 FSEGKIPYENRSNSEVVEDISTGFRLYK--PRLASTHVYQIMNHCWKERPEDRPAFSRLL 253

Query: 61  NH 62
             
Sbjct: 254 RQ 255

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 55.9 bits (134), Expect = 2e-10
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTK-PPPSFREPDVWTPEFIDFVSRCLVKNPEER-ATASE 58
           +  G+PP+    P+   +    + P P     +  + +    V + L KNPE R  TA+E
Sbjct: 207 VLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 266

Query: 59  MLNHEFIQVSPG 70
           M   + ++V  G
Sbjct: 267 MR-ADLVRVHNG 277

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 46.7 bits (110), Expect = 3e-07
 Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 120 RNILLNTEGHAKLADFGVAGQL---TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
            NI+++     K+ DFG+A  +    +++ +   VIGT  +++PE  +    D  +D++S
Sbjct: 140 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 199

Query: 177 L 177
           L
Sbjct: 200 L 200

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.0 bits (134), Expect = 2e-10
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN L+      K+ADFG++  +   D             WM PE I    Y   +D+W+ 
Sbjct: 169 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 228

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.2 bits (119), Expect = 2e-08
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
            + G  PY  +     I+ +      +   P+    E  + +  C  K P +R +   + 
Sbjct: 236 FSYGLQPYYGMAHEEVIYYVRDGNILAC--PENCPLELYNLMRLCWSKLPADRPSFCSIH 293

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.5 bits (133), Expect = 3e-10
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
            + GK PY           I          P + + +    +  C  +  +ER T   +L
Sbjct: 195 YSLGKMPYERFTNSETAEHIAQGLRLYR--PHLASEKVYTIMYSCWHEKADERPTFKILL 252

Query: 61  NH 62
           ++
Sbjct: 253 SN 254

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 3e-10
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNT-VIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN L+N +G  K++DFG++  + D     +        W  PEV+    +   +D+W+ 
Sbjct: 129 RNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 187

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 3e-10
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN+L+ T  H K+ DFG+A  L   +             WMA E I    Y   +D+WS 
Sbjct: 140 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 199

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 10/62 (16%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M  G  PY  I       ++          P + T +    + +C + + + R    E++
Sbjct: 207 MTFGSKPYDGIPASEISSILEKGERLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELI 264

Query: 61  NH 62
             
Sbjct: 265 IE 266

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 3e-10
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNT---VIGTPFWMAPEVIQEIGYDCVADMWS 176
           RNIL+N+    K++DFG++  L D      T         W APE I    +   +D+WS
Sbjct: 139 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 198

Query: 177 L 177
            
Sbjct: 199 F 199

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 8/61 (13%), Positives = 20/61 (32%), Gaps = 2/61 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M  G+ PY ++     +  I          P          + +C  +    R   ++++
Sbjct: 207 MTYGERPYWELSNHEVMKAINDGFRLPT--PMDCPSAIYQLMMQCWQQERARRPKFADIV 264

Query: 61  N 61
           +
Sbjct: 265 S 265

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 4e-10
 Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 1/62 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
            + G  PY  I      + +         +P   T E    +  C   +  +R +   + 
Sbjct: 260 FSLGVNPYPGIPVDANFYKLIQNGFK-MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLT 318

Query: 61  NH 62
           + 
Sbjct: 319 SF 320

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 4e-08
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN+L+      K+ DFG+A  +        R        WMAPE + E  Y   +D+WS 
Sbjct: 193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 252

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 54.8 bits (131), Expect = 4e-10
 Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 12/70 (17%)

Query: 120 RNILLN-----TEGHAKLADFGVAGQLTDTMAK-------RNTVIGTPFWMAPEVIQEIG 167
            N L+            + DFG+     D + K       +  + GT  +M+        
Sbjct: 130 DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGRE 189

Query: 168 YDCVADMWSL 177
                D+ +L
Sbjct: 190 QSRRDDLEAL 199

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (131), Expect = 4e-10
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 11/91 (12%)

Query: 25  PPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGGNIPPGPPGAPSGG 84
           P       +   +  D +S+ LV +P +R +  + L H +I V         PP      
Sbjct: 274 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIY-- 331

Query: 85  GFCDFEFLKFLSYDDLQHRMANLDCEMEREI 115
              D +       D+ +H +      + +E+
Sbjct: 332 ---DKQL------DEREHTIEEWKELIYKEV 353

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 5e-05
 Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 12/103 (11%)

Query: 86  FCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRR-----------NILLNTEGHAKLAD 134
             D    + +  +    RM+ L  +M   I+ L             NI++ ++   K+ D
Sbjct: 103 LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILD 162

Query: 135 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           FG+A     +       + T ++ APEVI  +GY    D+WS+
Sbjct: 163 FGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSV 204

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 5e-10
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 11/67 (16%)

Query: 1   MAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM 59
           M  G  P+  D   +R       +           + E    +  CL   P +R T  E+
Sbjct: 203 MVCGDIPFEHDEEIIRGQVFFRQR----------VSSECQHLIRWCLALRPSDRPTFEEI 252

Query: 60  LNHEFIQ 66
            NH ++Q
Sbjct: 253 QNHPWMQ 259

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 9e-09
 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 120 RNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGY-DCVADMWSL 177
            NIL++   G  KL DFG    L DT+       GT  +  PE I+   Y    A +WSL
Sbjct: 139 ENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 5e-10
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVADMWSL 177
            N+LL+  G  KLADFG+A             + T ++ APE++     Y    DMW++
Sbjct: 129 NNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAV 187

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 1/75 (1%)

Query: 5   KPPYGDIHPMRAIFMIPTKPPPSFRE-PDVWTPEFIDFVSRCLVKNPEERATASEMLNHE 63
           +  + D+  +       + P             + +D +    + NP  R TA++ L  +
Sbjct: 222 EEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 281

Query: 64  FIQVSPGGNIPPGPP 78
           +    PG       P
Sbjct: 282 YFSNRPGPTPGCQLP 296

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 5e-10
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M  G PPY D++       +          P+       + + +C     E R + SE++
Sbjct: 228 MTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 285

Query: 61  NH 62
           + 
Sbjct: 286 SR 287

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 7e-09
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNT----VIGTPFWMAPEVIQEIGYDCVADMW 175
           RN +L+ +   K+ADFG+A  + D                 WMA E +Q   +   +D+W
Sbjct: 159 RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 218

Query: 176 SL 177
           S 
Sbjct: 219 SF 220

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 54.5 bits (130), Expect = 6e-10
 Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 26/92 (28%)

Query: 1   MAEGKPPYGDIHPMRAIFMI--------------------------PTKPPPSFREPDVW 34
           M  G P +  +     +  I                            +P P        
Sbjct: 194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGL 253

Query: 35  TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
               ID +S+ L  +P +R TA + L H + +
Sbjct: 254 DESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 46.0 bits (108), Expect = 5e-07
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCVADMWSL 177
           N+L+N EG  K+ADFG+A      + K    I T ++ AP+V+     Y    D+WS+
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSV 187

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 8e-10
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 6   PPYGDIHPMRAIFMIPTKPPPSFRE---PDVWTPEFIDFVSRCLVKNPEERATASEMLNH 62
            P  D + +     +        ++     V  P  +D + + LV +P +R  + + LNH
Sbjct: 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305

Query: 63  EFIQVSP 69
           +F    P
Sbjct: 306 DFFWSDP 312

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 4e-09
 Identities = 25/145 (17%), Positives = 46/145 (31%), Gaps = 25/145 (17%)

Query: 58  EMLNHEFIQVSPGGNIPPGPPGAPSGGGFCD-FEFLKFLSYDDLQHRMANLDCEMEREI- 115
           ++L HE +            P     G     F+F +      L + +        + + 
Sbjct: 64  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 123

Query: 116 ------------------EQLRRNILLNTEGHAKLADFGVAGQL----TDTMAKRNTVIG 153
                             +    N+L+  +G  KLADFG+A            +    + 
Sbjct: 124 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183

Query: 154 TPFWMAPEVIQ-EIGYDCVADMWSL 177
           T ++  PE++  E  Y    D+W  
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGA 208

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.4 bits (130), Expect = 8e-10
 Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 5/71 (7%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT----- 55
           +  G  P+          +       +   PD ++PE    +   L ++   R       
Sbjct: 199 LLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRG 258

Query: 56  ASEMLNHEFIQ 66
           A E+    F +
Sbjct: 259 AQEVKESPFFR 269

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.1 bits (119), Expect = 3e-08
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 3/59 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IGYDCVADMWSL 177
            NILL+  GH +++D G+A   +    K +  +GT  +MAPEV+Q+ + YD  AD +SL
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 192

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 9e-10
 Identities = 12/63 (19%), Positives = 22/63 (34%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHE 63
           G+  +     +           P  +          D + +CL  NP +R +A   L+H 
Sbjct: 235 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 294

Query: 64  FIQ 66
           + Q
Sbjct: 295 YFQ 297

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 2e-08
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 121 NILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           NIL+ + G  KLADFG+A ++        +V+ T ++ APEV+ +  Y    D+WS+
Sbjct: 146 NILVTSSGQIKLADFGLA-RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 201

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 1e-09
 Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
              G+ P+  ++  + +  I  K       P+    +  + + +C    PE+R T   + 
Sbjct: 208 FTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR 266

Query: 61  NH 62
           + 
Sbjct: 267 DF 268

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 2e-09
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 120 RNILLNTEGHAKLADFGVAGQLT---DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWS 176
           RN+LL T    K+ DFG+   L    D    +        W APE ++   +   +D W 
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199

Query: 177 L 177
            
Sbjct: 200 F 200

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.6 bits (128), Expect = 1e-09
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTV-----IGTPFWMAPEVIQEIGYDCVADM 174
           RNIL+N+    K++DFG++  L D  +               W APE IQ   +   +D+
Sbjct: 157 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 216

Query: 175 WSL 177
           WS 
Sbjct: 217 WSY 219

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.5 bits (120), Expect = 1e-08
 Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           M+ G+ PY D+     I  I          P          +  C  K+   R    +++
Sbjct: 227 MSYGERPYWDMTNQDVINAIEQDYRLPP--PMDCPSALHQLMLDCWQKDRNHRPKFGQIV 284

Query: 61  NH 62
           N 
Sbjct: 285 NT 286

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.5 bits (127), Expect = 2e-09
 Identities = 13/67 (19%), Positives = 26/67 (38%)

Query: 12  HPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG 71
                 + +       ++       E  DF+S  L  +P +RA A  ++NH +++ + G 
Sbjct: 278 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM 337

Query: 72  NIPPGPP 78
                P 
Sbjct: 338 EEIRVPD 344

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.0 bits (79), Expect = 0.003
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 119 RRNILLNTEGH-AKLADFGVA--GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMW 175
             N+L+        L    +A  G            I T  + +PEV+    + C AD+W
Sbjct: 154 PENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIW 213

Query: 176 SL 177
           S 
Sbjct: 214 ST 215

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 2e-09
 Identities = 18/78 (23%), Positives = 25/78 (32%), Gaps = 4/78 (5%)

Query: 5   KPPYGDIHPMRAIFMIPTKPPPSFRE--PDVWTPEFIDFVSRCLVKNPEERATASEMLNH 62
           +    +++P    F  P      + +       PE I   SR L   P  R T  E   H
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303

Query: 63  EFIQ--VSPGGNIPPGPP 78
            F      P   +P G  
Sbjct: 304 SFFDELRDPNVKLPNGRD 321

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 12/50 (24%), Positives = 17/50 (34%)

Query: 128 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
              KL DFG A QL       + +    +     +     Y    D+WS 
Sbjct: 160 AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 209

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 10/65 (15%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 3   EGKPPYGDIHPMRAIFMIPTKPPPSFRE-PDVWTPEFIDFVSRCLVKNPEERATASEMLN 61
           E      ++     +  +P K    +         + +D + + L  NP +R    + L 
Sbjct: 235 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294

Query: 62  HEFIQ 66
           H +++
Sbjct: 295 HPYLE 299

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 120 RNILLNTEGHAKLADFGVAGQLT---DTMAKRNTVIGTPFWMAPEVI-QEIGYDCVADMW 175
            N+LLNT    K+ DFG+A       D        + T ++ APE++    GY    D+W
Sbjct: 138 SNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 197

Query: 176 SL 177
           S+
Sbjct: 198 SV 199

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 19/119 (15%), Positives = 36/119 (30%), Gaps = 14/119 (11%)

Query: 2   AEGKPPYGDIHPMRAIFMIPTKPPPSFRE-PDVWTPEFIDFVSRCLVKNPEERATASEML 60
           AE             +  +P      F       +P  ++ + + LV + E+R TA E L
Sbjct: 240 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEAL 299

Query: 61  NHEFIQVSPGGNIPPGPPGAPSGGGFCDFEFLKFLSYDDLQHRMANLDCEMEREIEQLR 119
            H + +        P                    S+DD+   +        +E+   +
Sbjct: 300 AHPYFESLHDTEDEPQVQKYDD-------------SFDDVDRTLDEWKRVTYKEVLSFK 345

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 6e-04
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCVADMWSL 177
            N+ +N +   K+ DFG+A Q    M      + T ++ APEVI     Y    D+WS+
Sbjct: 150 GNLAVNEDCELKILDFGLARQADSEM---TGYVVTRWYRAPEVILNWMRYTQTVDIWSV 205

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 3e-09
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 2   AEGKPPYGDIHPMRAIFMIPTKPPPSFRE-PDVWTPEFIDFVSRCLVKNPEERATASEML 60
           AE             I  +   P  +F        P  +D + + LV + ++R TA++ L
Sbjct: 240 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299

Query: 61  NHEFIQVSPGGNIPPGPP 78
            H +       +  P   
Sbjct: 300 AHAYFAQYHDPDDEPVAD 317

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 3e-09
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
            + G  PY  +           +     R PD  TPE    +  C    P +R T SE++
Sbjct: 230 FSLGASPYPGVKIDEEFCRRLKEGTR-MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 288

Query: 61  NH 62
            H
Sbjct: 289 EH 290

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 9e-08
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RNILL+ +   K+ DFG+A  +       ++        WMAPE I +  Y   +D+WS 
Sbjct: 163 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 222

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 4e-09
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 10/68 (14%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTD----TMAKRNTVIGTPFWMAPEVIQE------IGYD 169
           +NIL+   G   +AD G+A +            N  +GT  +MAPEV+ +          
Sbjct: 137 KNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF 196

Query: 170 CVADMWSL 177
             AD++++
Sbjct: 197 KRADIYAM 204

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 12/79 (15%), Positives = 18/79 (22%), Gaps = 19/79 (24%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFRE--------------PDVWTP-----EFIDF 41
           +A      G     +  +       PS  E              P+ W            
Sbjct: 211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKI 270

Query: 42  VSRCLVKNPEERATASEML 60
           +  C   N   R TA  + 
Sbjct: 271 MRECWYANGAARLTALRIK 289

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.5 bits (125), Expect = 4e-09
 Identities = 13/71 (18%), Positives = 28/71 (39%), Gaps = 8/71 (11%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEER-----AT 55
           MA G PP+    P++    I +        P  ++ +  D +   L  +  +R       
Sbjct: 231 MAAGYPPFFADQPIQIYEKIVSGKVR---FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNG 287

Query: 56  ASEMLNHEFIQ 66
            +++ NH++  
Sbjct: 288 VNDIKNHKWFA 298

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.2 bits (106), Expect = 1e-06
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            N+L++ +G+ ++ DFG A        +  T+ GTP  +APE+I   GY+   D W+L
Sbjct: 170 ENLLIDQQGYIQVTDFGFA---KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWAL 224

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 4e-09
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 62
           G  PY  +        +P         P     E  D + +C  + P ER + +++L  
Sbjct: 223 GGTPYCGMTCAELYEKLPQGYRLEK--PLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 4e-08
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RNIL+     AK+ADFG++ +  +   K+        WMA E +    Y   +D+WS 
Sbjct: 156 RNILVGENYVAKIADFGLS-RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 212

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 52.2 bits (124), Expect = 4e-09
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 3   EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 62
           E  P + DI    +                + +PE +DF+ + L  + + R TA E + H
Sbjct: 262 ELDPRFNDILGRHSRKRWERFVHS--ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319

Query: 63  EFIQ 66
            +  
Sbjct: 320 PYFY 323

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 44.4 bits (104), Expect = 2e-06
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 120 RNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI-GYDCVADMWSL 177
            N++++ E    +L D+G+A +      + N  + + ++  PE++ +   YD   DMWSL
Sbjct: 158 HNVMIDHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 216

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 5e-09
 Identities = 12/64 (18%), Positives = 19/64 (29%)

Query: 3   EGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 62
           E + P     P    + +                   D +   L  NP +R +A E L H
Sbjct: 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283

Query: 63  EFIQ 66
            +  
Sbjct: 284 PYFS 287

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 5e-06
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG-YDCVADMWSL 177
           +N+L+N  G  KLA+FG+A      +   +  + T ++  P+V+     Y    DMWS 
Sbjct: 130 QNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSA 188

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 8e-09
 Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +  G+ PY  +     I  +          PD    E    +  C  + PE+R T   + 
Sbjct: 204 VTHGRIPYPGMTNPEVIQNLERGYRMVR--PDNCPEELYQLMRLCWKERPEDRPTFDYLR 261

Query: 61  N--HEFIQVS 68
           +   +F   +
Sbjct: 262 SVLEDFFTAT 271

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 5e-08
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
            NIL++     K+ADFG+A  + D     R        W APE I    +   +D+WS 
Sbjct: 138 ANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 1e-08
 Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 26/92 (28%)

Query: 1   MAEGKPPYGDIHPMRAIFMI-------------------------PTKPPPSFRE-PDVW 34
           M   +  +     +  +F I                         P      F +     
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL 255

Query: 35  TPEFIDFVSRCLVKNPEERATASEMLNHEFIQ 66
             +    +S+ L  +P +R +A   L H F Q
Sbjct: 256 DEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 8e-08
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYDCVA-DMWSL 177
           +N+L+NTEG  KLADFG+A      +      + T ++ APE++    Y   A D+WSL
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSL 189

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 4e-08
 Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH 62
            + PY  +   + +  +          PD       + +  C   NP+ R +  E+++ 
Sbjct: 232 AEQPYQGLSNEQVLRFVMEGGLLDK--PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQL--TDTMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN ++  +   K+ DFG+   +  TD   K    +    WM+PE +++  +   +D+WS 
Sbjct: 162 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 221

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.1 bits (116), Expect = 4e-08
 Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 10/68 (14%)

Query: 120 RNILLNTEGHAKLA---DFGVAGQLTDT-------MAKRNTVIGTPFWMAPEVIQEIGYD 169
            N L+       L    DFG+A +  D          +   + GT  + +      I   
Sbjct: 132 DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQS 191

Query: 170 CVADMWSL 177
              D+ SL
Sbjct: 192 RRDDLESL 199

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.6 bits (107), Expect = 8e-07
 Identities = 8/74 (10%), Positives = 21/74 (28%), Gaps = 8/74 (10%)

Query: 1   MAEGKPPYGDIHPMRAIFMI-----PTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT 55
              G  P+  +                   P       +  EF  +++ C     +++  
Sbjct: 206 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD 265

Query: 56  AS---EMLNHEFIQ 66
            S   ++  + F +
Sbjct: 266 YSYLRQLFRNLFHR 279

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.6 bits (115), Expect = 6e-08
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNT-VIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN L+      K+ADFG++  +T      +        W APE +    +   +D+W+ 
Sbjct: 144 RNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAF 202

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.8 bits (113), Expect = 1e-07
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 4   GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           G  PY  I   +   ++          P+    +  + +  C   NP +R + +E+ 
Sbjct: 213 GMSPYPGIDLSQVYELLEKDYRMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIH 267

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 10/62 (16%), Positives = 18/62 (29%), Gaps = 2/62 (3%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
              G  PY  +       ++          P   T E    +  C    P +R T  +++
Sbjct: 231 FTLGGSPYPGVPVEELFKLLKEGHRMDK--PSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288

Query: 61  NH 62
             
Sbjct: 289 ED 290

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTDTMAKRNT--VIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RN+L+  +   K+ADFG+A  +      + T        WMAPE + +  Y   +D+WS 
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 2e-07
 Identities = 10/60 (16%), Positives = 20/60 (33%)

Query: 1   MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML 60
           +           P+ + F    K       P+    E  D +  C   +P +R T  +++
Sbjct: 240 LFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 1e-04
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 120 RNILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIQEIGYDCVADMWSL 177
           RNILL      K+ DFG+A  + +      +        WMAPE I    Y   +D+WS 
Sbjct: 174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 233

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	177
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.76
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.75
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.74
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.73
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.72
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.72
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.71
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.71
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.71
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.71
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.7
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.69
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.69
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.68
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.68
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.68
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.68
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.68
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.68
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.67
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.67
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.67
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.66
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.66
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.65
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.65
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.64
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.63
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.63
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.63
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.62
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.62
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.6
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.6
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.6
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.6
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.6
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.58
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.57
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.57
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.56
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.56
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.55
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.54
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.54
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.53
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.53
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.53
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.53
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.52
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.52
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.52
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.51
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.5
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.5
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.47
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.46
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.46
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.44
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.35
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.34
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.34
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.31
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.3
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.28
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.24
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.24
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.23
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.22
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.21
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.17
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.17
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.17
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.16
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.15
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.15
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.14
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.13
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.12
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.1
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.09
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.09
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.06
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.04
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.02
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	98.95
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	98.95
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	98.9
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	98.89
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	98.88
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	98.88
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	98.87
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	98.81
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	98.79
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	98.79
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	98.78
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	98.76
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	98.69
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	98.67
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	98.65
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	98.65
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	98.64
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	98.64
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	98.63
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	98.62
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.56
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	98.54
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	98.5
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.5
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	98.43
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	98.42
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	98.41
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.36
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.33
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	98.31
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	98.3
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	98.27
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	98.21
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	97.92
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.62
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	96.71
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	96.04

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.2e-20  Score=134.55  Aligned_cols=79  Identities=43%  Similarity=0.780  Sum_probs=69.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.|+|..+++|+|+|            |+||+++.++.+|++|||+++.+..........+||+.|||||++.+.
T Consensus       124 qi~~aL~yLH~~~iiHrDiK------------p~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~  191 (293)
T d1yhwa1         124 ECLQALEFLHSNQVIHRDIK------------SDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK  191 (293)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSS
T ss_pred             HHHHHHHHHHHCCCcccCCc------------HHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCC
Confidence            34788889999999999999            669999999999999999998876554455667899999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++||||+
T Consensus       192 ~~~~~~DiwSl  202 (293)
T d1yhwa1         192 AYGPKVDIWSL  202 (293)
T ss_dssp             CBCTHHHHHHH
T ss_pred             CCCchhceehH
Confidence            99999999995

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.8e-20  Score=135.69  Aligned_cols=79  Identities=32%  Similarity=0.542  Sum_probs=69.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|..+++|||+|            |+||+++.+|.+|++|||+|+............+||+.|+|||++.+.
T Consensus       113 qil~al~ylH~~~iiHRDlK------------P~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~  180 (337)
T d1o6la_         113 EIVSALEYLHSRDVVYRDIK------------LENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN  180 (337)
T ss_dssp             HHHHHHHHHHHTTCBCCCCC------------GGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred             HHhhhhhhhhhcCccccccC------------HHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCC
Confidence            34678889999999999999            679999999999999999998765544455668999999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++||||+
T Consensus       181 ~y~~~~DiwSl  191 (337)
T d1o6la_         181 DYGRAVDWWGL  191 (337)
T ss_dssp             CBCTTHHHHHH
T ss_pred             CCChhhcccch
Confidence            99999999995

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4e-20  Score=131.75  Aligned_cols=78  Identities=31%  Similarity=0.535  Sum_probs=56.6

Q ss_pred             hHHHHhhhchhh-----HHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          88 DFEFLKFLSYDD-----LQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        88 ~~~~l~~l~~~~-----~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      ...+++++|..+     ++|+|+|            |+||+++.++.+|++|||+++.+..........+||+.|||||+
T Consensus       118 i~~al~ylH~~~~~~~~IiHrDiK------------p~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~  185 (269)
T d2java1         118 LTLALKECHRRSDGGHTVLHRDLK------------PANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ  185 (269)
T ss_dssp             HHHHHHHHHHHCC---------CC------------GGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHH
T ss_pred             HHHHHHHHHHhcCCCCCEEeCcCc------------hhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHH
Confidence            367788999875     9999999            66999999999999999999987655444556789999999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..|+.++|||||
T Consensus       186 l~~~~~~~~~DIwSl  200 (269)
T d2java1         186 MNRMSYNEKSDIWSL  200 (269)
T ss_dssp             HTTCCCCHHHHHHHH
T ss_pred             HcCCCCChHHHHHhh
Confidence            999899999999995

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=7.9e-20  Score=129.77  Aligned_cols=77  Identities=31%  Similarity=0.463  Sum_probs=67.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +..++++++|..+++|+|+|            |+||+++.++.+|++|||+++.....  .....+||+.|||||++.+.
T Consensus       114 qi~~al~~lH~~~ivHrDiK------------p~Nill~~~~~~kl~DFG~a~~~~~~--~~~~~~Gt~~Y~APE~~~~~  179 (263)
T d2j4za1         114 ELANALSYCHSKRVIHRDIK------------PENLLLGSAGELKIADFGWSVHAPSS--RRTTLCGTLDYLPPEMIEGR  179 (263)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTSCEEECCCCSCSCCCCC--CCEETTEEGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCeeeeeec------------cccceecCCCCEeecccceeeecCCC--cccccCCCCcccCHHHHcCC
Confidence            34788889999999999999            66999999999999999999865433  33456899999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       180 ~~~~~~DiwSl  190 (263)
T d2j4za1         180 MHDEKVDLWSL  190 (263)
T ss_dssp             CCCTTHHHHHH
T ss_pred             CCCchhhhhhH
Confidence            99999999995

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5.1e-20  Score=134.37  Aligned_cols=77  Identities=39%  Similarity=0.683  Sum_probs=65.1

Q ss_pred             chHHHHhhhchh-hHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYD-DLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~-~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      +...++.|+|.. +++|||+|            |+||+++.++.+|++|||+|+.+...  ...+.+||+.|||||++.+
T Consensus       112 qil~aL~yLH~~~~IiHRDiK------------P~NILl~~~~~vkl~DFGla~~~~~~--~~~~~~GT~~Y~APEvl~~  177 (322)
T d1s9ja_         112 AVIKGLTYLREKHKIMHRDVK------------PSNILVNSRGEIKLCDFGVSGQLIDS--MANSFVGTRSYMSPERLQG  177 (322)
T ss_dssp             HHHHHHHHHHHHHCCCCSCCS------------GGGEEECTTCCEEECCCCCCHHHHHH--TC---CCSSCCCCHHHHHC
T ss_pred             HHHHHHHHHHHhCCEEccccC------------HHHeeECCCCCEEEeeCCCccccCCC--ccccccCCccccCchHHcC
Confidence            447888899974 89999999            67999999999999999999876443  2345789999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++||||+
T Consensus       178 ~~y~~~~DiWSl  189 (322)
T d1s9ja_         178 THYSVQSDIWSM  189 (322)
T ss_dssp             SCCCTTHHHHHH
T ss_pred             CCCCcHHHHHHH
Confidence            999999999995

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.2e-19  Score=129.35  Aligned_cols=79  Identities=25%  Similarity=0.378  Sum_probs=66.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~  164 (177)
                      +...+++++|..+++|+|+|            |+||+++.++.+|++|||+|+.+...  .......+||+.|||||++.
T Consensus       111 qi~~al~ylH~~~IiHrDiK------------p~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~  178 (271)
T d1nvra_         111 QLMAGVVYLHGIGITHRDIK------------PENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK  178 (271)
T ss_dssp             HHHHHHHHHHHTTEECSCCC------------GGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHH
T ss_pred             HHHHHHHHHHHcCCccCccc------------HHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhc
Confidence            44788889999999999999            67999999999999999999876432  22345578999999999998


Q ss_pred             CCCC-CccceEecC
Q psy3254         165 EIGY-DCVADMWSL  177 (177)
Q Consensus       165 ~~~~-~~~~Diws~  177 (177)
                      +..| +.++||||+
T Consensus       179 ~~~~~~~~~DiwSl  192 (271)
T d1nvra_         179 RREFHAEPVDVWSC  192 (271)
T ss_dssp             CSSBCHHHHHHHHH
T ss_pred             CCCCCCCceeeeHh
Confidence            8775 578999995

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.6e-19  Score=129.71  Aligned_cols=78  Identities=32%  Similarity=0.540  Sum_probs=64.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc--cCCCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++++|..+++|+|+|            |+||+++.++.++++|||+|+.+...  .......+||+.|||||++.+
T Consensus       117 i~~al~ylH~~~iiHrDiK------------p~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~  184 (288)
T d1uu3a_         117 IVSALEYLHGKGIIHRDLK------------PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE  184 (288)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHT
T ss_pred             HHHHHHhhccccEEcCcCC------------ccccccCCCceEEecccccceecccCCcccccccccCCccccCceeecc
Confidence            3678889999999999999            66999999999999999999876533  223345689999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++||||+
T Consensus       185 ~~~~~~~DiwSl  196 (288)
T d1uu3a_         185 KSACKSSDLWAL  196 (288)
T ss_dssp             CCCCHHHHHHHH
T ss_pred             CCCCcccceehh
Confidence            999999999995

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.1e-19  Score=130.67  Aligned_cols=79  Identities=44%  Similarity=0.815  Sum_probs=66.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccccccc--
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ--  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~--  164 (177)
                      +...++.|+|..+++|+|+|            |+||+++.++.+|++|||+|+..........+.+||+.|||||++.  
T Consensus       118 qi~~gL~ylH~~~ivHrDiK------------p~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~  185 (288)
T d2jfla1         118 QTLDALNYLHDNKIIHRDLK------------AGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE  185 (288)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHCCEEEeecC------------hhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhc
Confidence            44788889999999999999            6699999999999999999986654333344578999999999984  


Q ss_pred             ---CCCCCccceEecC
Q psy3254         165 ---EIGYDCVADMWSL  177 (177)
Q Consensus       165 ---~~~~~~~~Diws~  177 (177)
                         ...|+.++|||||
T Consensus       186 ~~~~~~y~~k~DiwSl  201 (288)
T d2jfla1         186 TSKDRPYDYKADVWSL  201 (288)
T ss_dssp             STTTSSTTTHHHHHHH
T ss_pred             ccCCCCCChhhhHHHH
Confidence               4568999999995

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.6e-19  Score=130.44  Aligned_cols=79  Identities=30%  Similarity=0.460  Sum_probs=62.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      +...++.|+|..+++|+|+|            |+||+++.++.+||+|||+|+.......  .....+||+.|||||++.
T Consensus       142 qi~~gl~ylH~~~ivHrDlK------------p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~  209 (299)
T d1ywna1         142 QVAKGMEFLASRKCIHRDLA------------ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  209 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCCcCCcCC------------ccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhh
Confidence            34688899999999999999            6699999999999999999986543322  234567999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       210 ~~~~~~~sDiwS~  222 (299)
T d1ywna1         210 DRVYTIQSDVWSF  222 (299)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCCCcccceeeh
Confidence            9999999999995

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=3.2e-19  Score=129.78  Aligned_cols=76  Identities=37%  Similarity=0.577  Sum_probs=66.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|..+++|+|+|            |+||+++.++.+|++|||+++.....   ..+.+||+.|||||++.+.
T Consensus       112 qi~~al~~lH~~~iiHrDiK------------p~NILl~~~g~vkL~DFG~a~~~~~~---~~~~~Gt~~Y~APE~l~~~  176 (316)
T d1fota_         112 EVCLALEYLHSKDIIYRDLK------------PENILLDKNGHIKITDFGFAKYVPDV---TYTLCGTPDYIAPEVVSTK  176 (316)
T ss_dssp             HHHHHHHHHHTTTEECCCCC------------GGGEEECTTSCEEECCCSSCEECSSC---BCCCCSCTTTCCHHHHTTC
T ss_pred             HHHHhhhhhccCcEEccccC------------chheeEcCCCCEEEecCccceEeccc---cccccCcccccCHHHHcCC
Confidence            34678889999999999999            66999999999999999999876543   3457899999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++||||+
T Consensus       177 ~y~~~~DiwSl  187 (316)
T d1fota_         177 PYNKSIDWWSF  187 (316)
T ss_dssp             CBCTTHHHHHH
T ss_pred             CCCchhhcccc
Confidence            99999999995

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=3.1e-19  Score=131.53  Aligned_cols=75  Identities=32%  Similarity=0.518  Sum_probs=66.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|||+|            |+||+++.++.+||+|||+++.+...   ..+.+||+.|||||++.+..
T Consensus       150 i~~aL~yLH~~~iiHRDIK------------P~NILl~~~g~ikL~DFG~a~~~~~~---~~~~~Gt~~Y~APE~~~~~~  214 (350)
T d1rdqe_         150 IVLTFEYLHSLDLIYRDLK------------PENLLIDQQGYIQVTDFGFAKRVKGR---TWTLCGTPEALAPEIILSKG  214 (350)
T ss_dssp             HHHHHHHHHHTTEECCCCS------------GGGEEECTTSCEEECCCTTCEECSSC---BCCCEECGGGCCHHHHTTCC
T ss_pred             HHHHHHHHHhCCEecCcCC------------HHHcccCCCCCEEeeeceeeeecccc---cccccCccccCCHHHHcCCC
Confidence            3678889999999999999            66999999999999999999876532   34578999999999999999


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       215 ~~~~~DiwSl  224 (350)
T d1rdqe_         215 YNKAVDWWAL  224 (350)
T ss_dssp             BCTHHHHHHH
T ss_pred             CCccccccch
Confidence            9999999995

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4.6e-19  Score=126.62  Aligned_cols=79  Identities=27%  Similarity=0.447  Sum_probs=61.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.|+|..+++|+|+|            ++||+++.++.+|++|||+|+......  .......||+.|||||++.
T Consensus       112 qi~~gl~yLH~~~ivHrDlK------------p~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~  179 (276)
T d1uwha_         112 QTAQGMDYLHAKSIIHRDLK------------SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR  179 (276)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHT
T ss_pred             HHHHHHHHHhcCCEeccccC------------HHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHh
Confidence            34678889999999999999            679999999999999999998764321  2234567999999999996


Q ss_pred             C---CCCCccceEecC
Q psy3254         165 E---IGYDCVADMWSL  177 (177)
Q Consensus       165 ~---~~~~~~~Diws~  177 (177)
                      .   ..|+.++|||||
T Consensus       180 ~~~~~~~~~~sDiwS~  195 (276)
T d1uwha_         180 MQDKNPYSFQSDVYAF  195 (276)
T ss_dssp             TCSSCCCCHHHHHHHH
T ss_pred             cccCCCCCchhhhhhh
Confidence            4   358999999996

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.9e-19  Score=129.83  Aligned_cols=79  Identities=29%  Similarity=0.435  Sum_probs=67.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.++|..+++|||+|            |+||+++.++.+|++|||+|+.......  ...+..||+.|||||++.
T Consensus       172 qi~~gl~yLH~~~IiHRDlK------------p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~  239 (325)
T d1rjba_         172 QVAKGMEFLEFKSCVHRDLA------------ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  239 (325)
T ss_dssp             HHHHHHHHHHHTTEEETTCS------------GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCeeeccCc------------hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHc
Confidence            44788899999999999999            6699999999999999999987644322  233467899999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ++.|+.++|||||
T Consensus       240 ~~~~~~~~DiwS~  252 (325)
T d1rjba_         240 EGIYTIKSDVWSY  252 (325)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCCcceeccch
Confidence            9999999999996

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.7e-19  Score=126.25  Aligned_cols=78  Identities=29%  Similarity=0.415  Sum_probs=59.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCcccccccccccccccc
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~  164 (177)
                      ...++.++|..+++|+|+|            |+||+++.++.+||+|||+++.+.....   ......||+.|||||++.
T Consensus       119 i~~gl~~lH~~~iiHrDlK------------p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~  186 (283)
T d1mqba_         119 IAAGMKYLANMNYVHRDLA------------ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS  186 (283)
T ss_dssp             HHHHHHHHHHTTCCCSCCC------------GGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHH
T ss_pred             HHHhhhhccccccccCccc------------cceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHc
Confidence            4678889999999999999            6699999999999999999987644322   122346899999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       187 ~~~~~~~sDI~S~  199 (283)
T d1mqba_         187 YRKFTSASDVWSF  199 (283)
T ss_dssp             SCCCCHHHHHHHH
T ss_pred             cCCCCCccccccc
Confidence            9999999999996

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.3e-18  Score=125.59  Aligned_cols=79  Identities=29%  Similarity=0.455  Sum_probs=68.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      +...+++++|..+++|+|+|            |+||+++.++.+|++|||+++............+||+.|+|||++.. 
T Consensus       108 qil~aL~~lH~~~iiHrDiK------------p~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (299)
T d1ua2a_         108 MTLQGLEYLHQHWILHRDLK------------PNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA  175 (299)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHhhccceecccCC------------cceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHccC
Confidence            45788999999999999999            67999999999999999999877655445556789999999999875 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++||||+
T Consensus       176 ~~~~~~~DiwSl  187 (299)
T d1ua2a_         176 RMYGVGVDMWAV  187 (299)
T ss_dssp             SCCCHHHHHHHH
T ss_pred             CCCChhhhhhhc
Confidence            468999999995

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.8e-18  Score=125.98  Aligned_cols=79  Identities=37%  Similarity=0.519  Sum_probs=69.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|..+++|+|++            |+||+++.++.++++|||+++............+||+.|+|||++.+.
T Consensus       111 qi~~al~ylH~~~iiHrDik------------p~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (320)
T d1xjda_         111 EIILGLQFLHSKGIVYRDLK------------LDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ  178 (320)
T ss_dssp             HHHHHHHHHHHTTCBCCCCC------------GGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHhCCeeeccCc------------ccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCC
Confidence            34678889999999999999            669999999999999999998765544455567899999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++||||+
T Consensus       179 ~~~~~~DiwSl  189 (320)
T d1xjda_         179 KYNHSVDWWSF  189 (320)
T ss_dssp             CBCTHHHHHHH
T ss_pred             CCCchhhhhhh
Confidence            99999999995

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.3e-18  Score=122.62  Aligned_cols=76  Identities=33%  Similarity=0.517  Sum_probs=63.2

Q ss_pred             chHHHHhhhchhh--HHHHHhhhchHHHHHHHHhhcceEeC-CCCCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDD--LQHRMANLDCEMEREIEQLRRNILLN-TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~--~~~~~~~~~~~~~~~i~~l~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      +...+++|+|..+  ++|+|+|            |+||+++ .++.+|++|||+++.....  .....+||+.|||||++
T Consensus       120 qi~~gl~yLH~~~~~IiHrDiK------------p~NILl~~~~~~~Kl~DFGla~~~~~~--~~~~~~GT~~Y~aPE~~  185 (270)
T d1t4ha_         120 QILKGLQFLHTRTPPIIHRDLK------------CDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFMAPEMY  185 (270)
T ss_dssp             HHHHHHHHHHTSSSCCCCSCCC------------GGGEEESSTTSCEEECCTTGGGGCCTT--SBEESCSSCCCCCGGGG
T ss_pred             HHHHHHHHHHHCCCCEEeCCcC------------hhhceeeCCCCCEEEeecCcceeccCC--ccCCcccCccccCHHHh
Confidence            3467888999988  9999999            6699996 4789999999999864332  33457899999999998


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+ .|+.++|||||
T Consensus       186 ~~-~~~~~~DIwSl  198 (270)
T d1t4ha_         186 EE-KYDESVDVYAF  198 (270)
T ss_dssp             GT-CCCTHHHHHHH
T ss_pred             CC-CCCCcCchhhH
Confidence            75 69999999995

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=8.6e-19  Score=124.42  Aligned_cols=79  Identities=25%  Similarity=0.344  Sum_probs=57.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|+|++            ++||+++.++.+|++|||+++....... ......||+.|+|||++.+
T Consensus       109 qia~gl~~lH~~~iiHrDlK------------p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~  176 (263)
T d1sm2a_         109 DVCEGMAYLEEACVIHRDLA------------ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF  176 (263)
T ss_dssp             HHHHHHHHHHHTTCCCTTCS------------GGGEEECGGGCEEECSCC------------------CTTSCCHHHHTT
T ss_pred             HHHHHHHhhhccceeecccc------------hhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcC
Confidence            44678889999999999999            6699999999999999999987654322 2234578999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       177 ~~~~~k~DVwS~  188 (263)
T d1sm2a_         177 SRYSSKSDVWSF  188 (263)
T ss_dssp             CCCCHHHHHHHH
T ss_pred             CCCCchhhhcch
Confidence            999999999996

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=1.3e-18  Score=125.96  Aligned_cols=78  Identities=27%  Similarity=0.448  Sum_probs=54.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC---CCCCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN---TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      +...++.++|..+++|+|++            |+|+++.   .++.+|++|||+++..... ....+.+||+.|||||++
T Consensus       115 qi~~al~ylH~~~iiHrDiK------------p~Nil~~~~~~~~~vkl~DFG~a~~~~~~-~~~~~~~GT~~y~APE~~  181 (307)
T d1a06a_         115 QVLDAVKYLHDLGIVHRDLK------------PENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLSTACGTPGYVAPEVL  181 (307)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEESSSSTTCCEEECCC-------------------CTTSCHHHH
T ss_pred             HHHHHHHhhhhceeeeEEec------------ccceeecccCCCceEEEeccceeEEccCC-CeeeeeeeCccccCcHHH
Confidence            34788889999999999999            6699994   4788999999999865443 234457899999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++||||+
T Consensus       182 ~~~~~~~~~DiwSl  195 (307)
T d1a06a_         182 AQKPYSKAVDCWSI  195 (307)
T ss_dssp             TTCCCCTHHHHHHH
T ss_pred             cCCCCCcHHHhhhh
Confidence            99999999999995

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.68  E-value=2e-18  Score=127.75  Aligned_cols=77  Identities=34%  Similarity=0.503  Sum_probs=66.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      ....++.++|..+++|+|+|            |+||+++.++.+|++|||+|+.+...  .....+||+.|||||++.. 
T Consensus       115 qi~~aL~ylH~~~iiHrDlK------------P~NILl~~~g~iKl~DFGla~~~~~~--~~~~~~GT~~y~APE~~~~~  180 (364)
T d1omwa3         115 EIILGLEHMHNRFVVYRDLK------------PANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKG  180 (364)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEECSSSCEEECCCTTCEECSSS--CCCSCCSCGGGCCHHHHSTT
T ss_pred             HHHHHHHHHHHCCccceeec------------cceeEEcCCCcEEEeeeceeeecCCC--cccccccccccchhHHhhcC
Confidence            34788899999999999999            67999999999999999999876543  3345689999999999975 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       181 ~~~~~~~DiwSl  192 (364)
T d1omwa3         181 VAYDSSADWFSL  192 (364)
T ss_dssp             CCCCTHHHHHHH
T ss_pred             CCCCcccchhHH
Confidence            569999999995

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=6.9e-19  Score=126.39  Aligned_cols=79  Identities=23%  Similarity=0.355  Sum_probs=66.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....+++|+|..+++|+|+|            |+||+++.++.+||+|||+++....... ......||+.|+|||++.+
T Consensus       123 qi~~gL~yLH~~~iiHrDlK------------p~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~  190 (287)
T d1opja_         123 QISSAMEYLEKKNFIHRDLA------------ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY  190 (287)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHCCcccCccc------------cCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcC
Confidence            44678889999999999999            6699999999999999999987654322 2233458899999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       191 ~~~~~k~DiwS~  202 (287)
T d1opja_         191 NKFSIKSDVWAF  202 (287)
T ss_dssp             CCCSHHHHHHHH
T ss_pred             CCCCchhhhhhH
Confidence            999999999995

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.67  E-value=1.5e-18  Score=125.70  Aligned_cols=75  Identities=43%  Similarity=0.731  Sum_probs=64.1

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      +...++.|+|..+++|+|+|            |+||+++.++.+|++|||+++....    ....+||+.|||||++.+ 
T Consensus       123 qi~~aL~yLH~~~iiHrDiK------------p~NILl~~~~~~Kl~DFG~a~~~~~----~~~~~GT~~Y~APE~~~~~  186 (309)
T d1u5ra_         123 GALQGLAYLHSHNMIHRDVK------------AGNILLSEPGLVKLGDFGSASIMAP----ANSFVGTPYWMAPEVILAM  186 (309)
T ss_dssp             HHHHHHHHHHHTTCBCCCCS------------GGGEEEETTTEEEECCCTTCBSSSS----BCCCCSCGGGCCHHHHTTT
T ss_pred             HHHHHHHHHHhCCEeccCCC------------cceEEECCCCCEEEeecccccccCC----CCccccCccccCHHHHhcc
Confidence            34688889999999999999            6699999999999999999986543    234679999999999864 


Q ss_pred             --CCCCccceEecC
Q psy3254         166 --IGYDCVADMWSL  177 (177)
Q Consensus       166 --~~~~~~~Diws~  177 (177)
                        +.|+.++|||||
T Consensus       187 ~~~~y~~~~DiwSl  200 (309)
T d1u5ra_         187 DEGQYDGKVDVWSL  200 (309)
T ss_dssp             TSCCBCTHHHHHHH
T ss_pred             CCCCcCchhhhhhH
Confidence              458999999995

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=7.8e-19  Score=125.21  Aligned_cols=78  Identities=29%  Similarity=0.410  Sum_probs=66.7

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|+|+|            ++||+++.++.+||+|||+|+.+.... .......||+.|||||++..+
T Consensus       118 i~~gl~~lH~~~ivHrDiK------------p~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~  185 (272)
T d1qpca_         118 IAEGMAFIEERNYIHRDLR------------AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG  185 (272)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHC
T ss_pred             HHHHHHHHHhCCcccCccc------------hhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCC
Confidence            3678889999999999999            679999999999999999998765432 223445789999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       186 ~~~~~sDvwS~  196 (272)
T d1qpca_         186 TFTIKSDVWSF  196 (272)
T ss_dssp             EECHHHHHHHH
T ss_pred             CCCchhhhhhh
Confidence            89999999996

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.7e-18  Score=123.43  Aligned_cols=78  Identities=33%  Similarity=0.510  Sum_probs=67.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...+++++|..+++|+|+|            |+||+++.++.++++|||+++..... ......+||+.|+|||++.+.
T Consensus       124 qi~~aL~yLH~~~ivHrDiK------------p~NILi~~~~~~kl~dfg~~~~~~~~-~~~~~~~gT~~Y~APE~~~~~  190 (305)
T d1blxa_         124 QLLRGLDFLHSHRVVHRDLK------------PQNILVTSSGQIKLADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQS  190 (305)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTCCEEECSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHhCCEEecCCC------------ccEEEEcCCCCeeecchhhhhhhccc-ccCCCcccChhhcCcchhcCC
Confidence            44688899999999999999            67999999999999999999765433 234557899999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++||||+
T Consensus       191 ~y~~~~DiwSl  201 (305)
T d1blxa_         191 SYATPVDLWSV  201 (305)
T ss_dssp             CCCTHHHHHHH
T ss_pred             CCChhehhhch
Confidence            99999999995

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=2.5e-18  Score=124.10  Aligned_cols=79  Identities=30%  Similarity=0.389  Sum_probs=56.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC-----Cccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK-----RNTVIGTPFWMAPE  161 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~g~~~y~aPe  161 (177)
                      ....++.|+|..+++|+|+|            ++||+++.++.+|++|||+++.+......     .....||+.|||||
T Consensus       136 qia~gl~yLH~~~iiHrDlK------------p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE  203 (299)
T d1jpaa_         136 GIAAGMKYLADMNYVHRDLA------------ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE  203 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTCCEEECCC-----------------------CGGGSCHH
T ss_pred             HHHHHHHHHhhCCCccCccc------------cceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHH
Confidence            34678889999999999999            66999999999999999999876533211     11245789999999


Q ss_pred             cccCCCCCccceEecC
Q psy3254         162 VIQEIGYDCVADMWSL  177 (177)
Q Consensus       162 ~~~~~~~~~~~Diws~  177 (177)
                      ++.+..|+.++|||||
T Consensus       204 ~~~~~~~~~~sDvwS~  219 (299)
T d1jpaa_         204 AIQYRKFTSASDVWSY  219 (299)
T ss_dssp             HHHSCCCCHHHHHHHH
T ss_pred             HHhcCCCCcccccccc
Confidence            9999899999999996

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.7e-18  Score=125.98  Aligned_cols=79  Identities=30%  Similarity=0.376  Sum_probs=64.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCC--Ccccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.|+|..+++|+|+|            ++||+++.++.+|++|||+++.+......  .....||+.|||||++.
T Consensus       119 qi~~gl~yLH~~~iiHrDlK------------p~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~  186 (317)
T d1xkka_         119 QIAKGMNYLEDRRLVHRDLA------------ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL  186 (317)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHH
T ss_pred             HHHHHHHHHHHcCcccCcch------------hhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHh
Confidence            44678889999999999999            66999999999999999999876543222  23356899999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ++.|+.++|||||
T Consensus       187 ~~~~~~~sDvwS~  199 (317)
T d1xkka_         187 HRIYTHQSDVWSY  199 (317)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCCChhhhhhhH
Confidence            9899999999996

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.65  E-value=3.4e-18  Score=125.87  Aligned_cols=78  Identities=27%  Similarity=0.371  Sum_probs=66.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC--CCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT--EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      +...++.++|..+++|+|+|            |+||++..  ++.+|++|||+++.+... ....+.+||+.|||||++.
T Consensus       132 qi~~aL~ylH~~~iiHrDiK------------p~NIll~~~~~~~vkL~DFG~a~~~~~~-~~~~~~~gT~~Y~aPEv~~  198 (350)
T d1koaa2         132 QVCKGLCHMHENNYVHLDLK------------PENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAE  198 (350)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESSTTSCCEEECCCTTCEECCTT-SCEEEECSCTTTCCHHHHH
T ss_pred             HHHHHHHHHHhcCCeeeeec------------hhHeeeccCCCCeEEEeecchheecccc-cccceecCcccccCHHHHc
Confidence            44788899999999999999            66999954  578999999999876543 2334578999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++||||+
T Consensus       199 ~~~~~~~~DiwSl  211 (350)
T d1koaa2         199 GKPVGYYTDMWSV  211 (350)
T ss_dssp             TCCBCHHHHHHHH
T ss_pred             CCCCChhHhhhhh
Confidence            9999999999995

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=7.3e-18  Score=123.41  Aligned_cols=78  Identities=35%  Similarity=0.521  Sum_probs=66.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeecccccccccCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.|+|..+++|||++            |+||+++.   .+.+|++|||+++..... ......+||+.|||||++
T Consensus       119 qi~~al~ylH~~~iiHRDiK------------p~NIll~~~~~~~~~Kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~  185 (335)
T d2ozaa1         119 SIGEAIQYLHSINIAHRDVK------------PENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPEVL  185 (335)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEESCSSTTCCEEECCCTTCEECCCC-CCCCCCSCCCSSCCCCCC
T ss_pred             HHHHHHHHHHHcCCcccccc------------ccccccccccccccccccccceeeeccCC-CccccccCCcccCCcHHH
Confidence            34788999999999999999            67999975   457999999999876543 234557899999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++|||||
T Consensus       186 ~~~~y~~~~DiwSl  199 (335)
T d2ozaa1         186 GPEKYDKSCDMWSL  199 (335)
T ss_dssp             CGGGGSHHHHHHHH
T ss_pred             cCCCCCHHHHHHhh
Confidence            99899999999995

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=3.4e-18  Score=123.49  Aligned_cols=79  Identities=25%  Similarity=0.339  Sum_probs=65.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc--CCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....++.|+|..+++|+|++            ++||+++.++.+||+|||+++.+....  ...++..||+.|+|||++.
T Consensus       148 qi~~gl~ylH~~~ivHrDlK------------p~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~  215 (301)
T d1lufa_         148 QVAAGMAYLSERKFVHRDLA------------TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF  215 (301)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred             HHHHHhhhcccCCeEeeEEc------------ccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHc
Confidence            33678889999999999999            679999999999999999998664332  2234567899999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++|||||
T Consensus       216 ~~~~t~ksDVwS~  228 (301)
T d1lufa_         216 YNRYTTESDVWAY  228 (301)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             cCCCChhhhhccc
Confidence            9999999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.63  E-value=7.4e-18  Score=124.11  Aligned_cols=78  Identities=24%  Similarity=0.372  Sum_probs=66.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeC--CCCCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLN--TEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      ....+++++|..+++|+|+|            |+||+++  .++.+||+|||+|+.+... .......||+.|||||++.
T Consensus       135 qi~~aL~ylH~~~iiHRDiK------------p~NILl~~~~~~~vkL~DFGla~~~~~~-~~~~~~~gt~~y~aPE~~~  201 (352)
T d1koba_         135 QACEGLKHMHEHSIVHLDIK------------PENIMCETKKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIVD  201 (352)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESSTTCCCEEECCCTTCEECCTT-SCEEEECSSGGGCCHHHHT
T ss_pred             HHHHHHHHHHHCCeeecccc------------cccccccccCCCeEEEeecccceecCCC-CceeeccCcccccCHHHHc
Confidence            34788899999999999999            6699997  5689999999999876543 2344568999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++||||+
T Consensus       202 ~~~~~~~~DiwSl  214 (352)
T d1koba_         202 REPVGFYTDMWAI  214 (352)
T ss_dssp             TCCBCHHHHHHHH
T ss_pred             CCCCCCccchHHH
Confidence            9999999999995

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.5e-18  Score=122.50  Aligned_cols=79  Identities=29%  Similarity=0.397  Sum_probs=66.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc---CCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM---AKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|+|++            ++||+++.++.+|++|||+++.+....   .......||+.|||||++
T Consensus       117 qi~~gL~ylH~~~iiHrDlK------------p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~  184 (285)
T d1u59a_         117 QVSMGMKYLEEKNFVHRDLA------------ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI  184 (285)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHH
T ss_pred             HHHHHHHHHHhCCeecCcCc------------hhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHH
Confidence            44688889999999999999            669999999999999999998764321   123345689999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      ..+.|+.++|||||
T Consensus       185 ~~~~~~~ksDVwS~  198 (285)
T d1u59a_         185 NFRKFSSRSDVWSY  198 (285)
T ss_dssp             HHCEECHHHHHHHH
T ss_pred             hCCCCCccchhhcc
Confidence            98899999999996

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.8e-18  Score=122.62  Aligned_cols=79  Identities=29%  Similarity=0.420  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      ....++.++|..+++|+|++            |+||+++.++.++++|||+++.+.....   ......||+.|||||++
T Consensus       115 qi~~gl~ylH~~~iiHrDlK------------p~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l  182 (277)
T d1xbba_         115 QVSMGMKYLEESNFVHRDLA------------ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI  182 (277)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH
T ss_pred             HHHHHHhhHHhCCcccCCCc------------chhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhh
Confidence            34688889999999999999            6799999999999999999987643321   12335689999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++|||||
T Consensus       183 ~~~~~~~~sDiwS~  196 (277)
T d1xbba_         183 NYYKFSSKSDVWSF  196 (277)
T ss_dssp             HHCEEEHHHHHHHH
T ss_pred             cCCCCCchhhhccc
Confidence            98899999999996

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.6e-17  Score=117.38  Aligned_cols=79  Identities=25%  Similarity=0.419  Sum_probs=66.8

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ....++.++|..+++|++++            ++|++++.++.+|++|||+++.+..... ......||+.|+|||++.+
T Consensus       108 qi~~gl~~LH~~~iiH~dlk------------~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~  175 (258)
T d1k2pa_         108 DVCEAMEYLESKQFLHRDLA------------ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY  175 (258)
T ss_dssp             HHHHHHHHHHHTTBCCSCCS------------GGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHH
T ss_pred             HHHHHHHHHhhcCccccccc------------ceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcC
Confidence            33688889999999999999            6699999999999999999986654322 2233578999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       176 ~~~~~ksDiwS~  187 (258)
T d1k2pa_         176 SKFSSKSDIWAF  187 (258)
T ss_dssp             CCCCHHHHHHHH
T ss_pred             CCCCcceeeccc
Confidence            899999999996

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.1e-17  Score=119.93  Aligned_cols=78  Identities=26%  Similarity=0.336  Sum_probs=60.5

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc-CCCccccccccccccccccCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ...++.++|..+++|+|++            ++||+++.++.+||+|||+++.+.... .......||+.|+|||++...
T Consensus       122 i~~gl~~LH~~~ivH~DlK------------p~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  189 (285)
T d1fmka3         122 IASGMAYVERMNYVHRDLR------------AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  189 (285)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHC
T ss_pred             HHHHHHHHhhhheeccccc------------ceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCC
Confidence            3677889999999999999            669999999999999999998764332 223345789999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++|||||
T Consensus       190 ~~~~ksDI~S~  200 (285)
T d1fmka3         190 RFTIKSDVWSF  200 (285)
T ss_dssp             CCCHHHHHHHH
T ss_pred             CCCcHHhhhcc
Confidence            99999999996

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=9.1e-18  Score=119.66  Aligned_cols=79  Identities=28%  Similarity=0.431  Sum_probs=56.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC-CCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA-KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...+++.++|..+++|+|++            ++||+++.++.+|++|||+++.+..... ......||+.|+|||++.+
T Consensus       116 qi~~gl~ylH~~~iiHrDlK------------p~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~  183 (273)
T d1mp8a_         116 QLSTALAYLESKRFVHRDIA------------ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF  183 (273)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEEEETTEEEECC-------------------CCGGGCCHHHHHH
T ss_pred             HHHHHhhhhcccCeeccccc------------hhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhcc
Confidence            34678889999999999999            6699999999999999999987654322 2334568999999999998


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       184 ~~~~~~~DiwSl  195 (273)
T d1mp8a_         184 RRFTSASDVWMF  195 (273)
T ss_dssp             CCCSHHHHHHHH
T ss_pred             CCCCCccccccc
Confidence            899999999996

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.2e-17  Score=119.02  Aligned_cols=77  Identities=32%  Similarity=0.444  Sum_probs=63.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC-CCeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE-GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      +..++++++|..+++|+|+|            |+||+++.+ +.++++|||+++.....  ...+.+||+.|+|||++.+
T Consensus       118 qi~~al~~lH~~~iiHrDiK------------p~NIll~~~~~~vkl~DFG~a~~~~~~--~~~~~~GT~~y~aPE~~~~  183 (273)
T d1xwsa_         118 QVLEAVRHCHNCGVLHRDIK------------DENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRVYSPPEWIRY  183 (273)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEEETTTTEEEECCCTTCEECCSS--CBCCCCSCGGGSCHHHHHH
T ss_pred             HHHHHHHHHHHCCCccccCc------------ccceEEecCCCeEEECccccceecccc--cccccccCCCcCCHHHHcC
Confidence            34678889999999999999            679999854 78999999999865432  3345789999999999987


Q ss_pred             CCC-CccceEecC
Q psy3254         166 IGY-DCVADMWSL  177 (177)
Q Consensus       166 ~~~-~~~~Diws~  177 (177)
                      ..+ +.++||||+
T Consensus       184 ~~~~~~~~DiwSl  196 (273)
T d1xwsa_         184 HRYHGRSAAVWSL  196 (273)
T ss_dssp             SCBCHHHHHHHHH
T ss_pred             CCCCCcccccccc
Confidence            654 577899995

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.60  E-value=4e-17  Score=117.43  Aligned_cols=77  Identities=17%  Similarity=0.204  Sum_probs=64.1

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC-----CCCeEEeeeeccccccccc-------CCCcccccccc
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT-----EGHAKLADFGVAGQLTDTM-------AKRNTVIGTPF  156 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~-----~~~~~l~dfg~~~~~~~~~-------~~~~~~~g~~~  156 (177)
                      ..++.++|..+++|+|+|            |+||+++.     ++.++++|||+++.+....       ......+||+.
T Consensus       111 ~~~l~~lH~~giiHrDiK------------p~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~  178 (293)
T d1csna_         111 LARVQSIHEKSLVYRDIK------------PDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR  178 (293)
T ss_dssp             HHHHHHHHTTTEECCCCC------------GGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTT
T ss_pred             HHHHHHHHHCCceeccCC------------ccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchh
Confidence            577889999999999999            66999964     5679999999998764321       12334679999


Q ss_pred             ccccccccCCCCCccceEecC
Q psy3254         157 WMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       157 y~aPe~~~~~~~~~~~Diws~  177 (177)
                      |||||++.+..|+.++|||||
T Consensus       179 y~aPE~~~~~~~~~~~DiwSl  199 (293)
T d1csna_         179 YMSINTHLGREQSRRDDLEAL  199 (293)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHH
T ss_pred             hcCHHHhcCCCCChHHHHHHh
Confidence            999999999899999999995

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.4e-17  Score=117.19  Aligned_cols=78  Identities=27%  Similarity=0.410  Sum_probs=65.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC----CeEEeeeecccccccccCCCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG----HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~  162 (177)
                      +...+++++|..+++|+|++            |+||+++.++    .+|++|||+++..... .......||+.|+|||+
T Consensus       121 qi~~al~yLH~~~ivHrDiK------------p~Nill~~~~~~~~~vkl~DfG~a~~~~~~-~~~~~~~~t~~y~APE~  187 (293)
T d1jksa_         121 QILNGVYYLHSLQIAHFDLK------------PENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEI  187 (293)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEESCSSSSSCCEEECCCTTCEECTTS-CBCSCCCCCGGGCCHHH
T ss_pred             HHHHHHHhhhhcceeecccc------------cceEEEecCCCcccceEecchhhhhhcCCC-ccccccCCCCcccCHHH
Confidence            34688889999999999999            6699998766    4999999999876543 23345679999999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +.+..|+.++||||+
T Consensus       188 ~~~~~~~~~~DiwSl  202 (293)
T d1jksa_         188 VNYEPLGLEADMWSI  202 (293)
T ss_dssp             HTTCCBCTHHHHHHH
T ss_pred             HcCCCCCCcccchhh
Confidence            999899999999995

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=5.1e-17  Score=117.08  Aligned_cols=79  Identities=33%  Similarity=0.502  Sum_probs=67.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...+++++|..+++|+|+|            |+||+++.++.++++|||+++............+||+.|+|||++...
T Consensus       110 qil~~L~yLH~~~IiHrDiK------------peNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~  177 (298)
T d1gz8a_         110 QLLQGLAFCHSHRVLHRDLK------------PQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC  177 (298)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTC
T ss_pred             HHHHHHHHhhcCCEEccccC------------chheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccc
Confidence            34788889999999999999            679999999999999999998776554555567899999999998775


Q ss_pred             C-CCccceEecC
Q psy3254         167 G-YDCVADMWSL  177 (177)
Q Consensus       167 ~-~~~~~Diws~  177 (177)
                      . ++.++||||+
T Consensus       178 ~~~~~~~DiwSl  189 (298)
T d1gz8a_         178 KYYSTAVDIWSL  189 (298)
T ss_dssp             SSCCTHHHHHHH
T ss_pred             cCCCcccccccc
Confidence            5 5789999995

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.57  E-value=6.8e-17  Score=116.43  Aligned_cols=79  Identities=19%  Similarity=0.268  Sum_probs=64.9

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCC---CCCeEEeeeecccccccccC-------CCcccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNT---EGHAKLADFGVAGQLTDTMA-------KRNTVIGTPF  156 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~---~~~~~l~dfg~~~~~~~~~~-------~~~~~~g~~~  156 (177)
                      +...+++++|..+++|+|+|            |+||++..   +..++++|||+|+.+.....       .....+||+.
T Consensus       111 qi~~~l~~lH~~~iiHrDiK------------p~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~  178 (299)
T d1ckia_         111 QMISRIEYIHSKNFIHRDVK------------PDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR  178 (299)
T ss_dssp             HHHHHHHHHHHTTEECSCCC------------GGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSS
T ss_pred             HHHHHHHHHHHCCeeeccCC------------HhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCcc
Confidence            44788889999999999999            67998753   45799999999987643211       2344679999


Q ss_pred             ccccccccCCCCCccceEecC
Q psy3254         157 WMAPEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       157 y~aPe~~~~~~~~~~~Diws~  177 (177)
                      |||||++.+..|+.++|||||
T Consensus       179 y~aPE~~~~~~~~~~~DiwSl  199 (299)
T d1ckia_         179 YASINTHLGIEQSRRDDLESL  199 (299)
T ss_dssp             SCCHHHHTTBCCCHHHHHHHH
T ss_pred             ccCHHHHhCCCCCChhhEEec
Confidence            999999999899999999995

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=1.4e-16  Score=115.76  Aligned_cols=79  Identities=24%  Similarity=0.426  Sum_probs=65.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeeccccccccc----CCCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTM----AKRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~g~~~y~aPe~  162 (177)
                      +..++++++|..+++|+|++            |+||+++.++.++++|||+++.+....    ......+||+.|+|||+
T Consensus       125 qil~~l~~lH~~~ivHrDlK------------p~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~  192 (318)
T d3blha1         125 MLLNGLYYIHRNKILHRDMK------------AANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPEL  192 (318)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHH
T ss_pred             HHHHHHHHhccCCEEecCcC------------chheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHH
Confidence            44788999999999999999            779999999999999999997654321    12334679999999999


Q ss_pred             ccCC-CCCccceEecC
Q psy3254         163 IQEI-GYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~-~~~~~~Diws~  177 (177)
                      +.+. .|+.++||||+
T Consensus       193 ~~~~~~~~~k~DiwSl  208 (318)
T d3blha1         193 LLGERDYGPPIDLWGA  208 (318)
T ss_dssp             HTTCSSCCTHHHHHHH
T ss_pred             HcCCCCCCcHHHcccC
Confidence            9764 68999999995

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.56  E-value=7e-17  Score=115.23  Aligned_cols=79  Identities=28%  Similarity=0.491  Sum_probs=59.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc---cCCCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT---MAKRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~g~~~y~aPe~~  163 (177)
                      +...++.++|..+++|+|+|            |+||+++.++..+++|||.++.....   .......+||+.|||||++
T Consensus       119 qi~~al~~lH~~~iiHrDiK------------P~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~  186 (277)
T d1o6ya_         119 DACQALNFSHQNGIIHRDVK------------PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA  186 (277)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHH
T ss_pred             HHHHHHHHHHhCCccCcccc------------CcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHH
Confidence            34678889999999999999            67999999999999999998765332   1233456899999999999


Q ss_pred             cCCCCCccceEecC
Q psy3254         164 QEIGYDCVADMWSL  177 (177)
Q Consensus       164 ~~~~~~~~~Diws~  177 (177)
                      .+..|+.++||||+
T Consensus       187 ~~~~~~~~~DiwSl  200 (277)
T d1o6ya_         187 RGDSVDARSDVYSL  200 (277)
T ss_dssp             TTCCCCHHHHHHHH
T ss_pred             cCCCCCcceecccc
Confidence            99899999999995

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=9.2e-17  Score=115.81  Aligned_cols=79  Identities=28%  Similarity=0.411  Sum_probs=67.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      ....+++|+|..+++|+|+|            ++|++++.++.+|++|||+++.......  ......||+.|+|||++.
T Consensus       143 qi~~al~ylH~~~ivHrDiK------------p~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~  210 (299)
T d1fgka_         143 QVARGMEYLASKKCIHRDLA------------ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  210 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHH
T ss_pred             HHHHHHHHhhhCCEEeeeec------------ccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhc
Confidence            34678889999999999999            6699999999999999999987654322  233467899999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ++.|+.++|||||
T Consensus       211 ~~~y~~k~DiwS~  223 (299)
T d1fgka_         211 DRIYTHQSDVWSF  223 (299)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCCchhhhHHh
Confidence            9999999999996

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.5e-16  Score=115.63  Aligned_cols=79  Identities=29%  Similarity=0.465  Sum_probs=65.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVI  163 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~  163 (177)
                      +...+++++|..+++|||+|            |+||+++.++.+|++|||+++.......   .....+||+.|+|||++
T Consensus       117 qil~al~yLH~~~iiHRDIK------------p~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l  184 (345)
T d1pmea_         117 QILRGLKYIHSANVLHRDLK------------PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM  184 (345)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGT
T ss_pred             HHHHHHHHHHHCCCcCCCCC------------cceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHh
Confidence            34678889999999999999            6699999999999999999986543211   23456799999999998


Q ss_pred             cC-CCCCccceEecC
Q psy3254         164 QE-IGYDCVADMWSL  177 (177)
Q Consensus       164 ~~-~~~~~~~Diws~  177 (177)
                      .. ..|+.++||||+
T Consensus       185 ~~~~~~~~~~DiwSl  199 (345)
T d1pmea_         185 LNSKGYTKSIDIWSV  199 (345)
T ss_dssp             TTBCSCSTHHHHHHH
T ss_pred             hcCCCCCchhhhhcc
Confidence            55 568899999985

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.2e-16  Score=114.32  Aligned_cols=79  Identities=29%  Similarity=0.418  Sum_probs=66.0

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPFWMAPEV  162 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~y~aPe~  162 (177)
                      ....++.++|..+++|+|++            +.||+++.++.+|++|||+++.+.....    ......||..|+|||+
T Consensus       138 qia~gL~~lH~~~iiHrDLK------------~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  205 (311)
T d1r0pa_         138 QVAKGMKFLASKKFVHRDLA------------ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES  205 (311)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHH
T ss_pred             HHHHhhhhhcccCcccCCcc------------HHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHH
Confidence            34678889999999999999            6699999999999999999987643211    1223568999999999


Q ss_pred             ccCCCCCccceEecC
Q psy3254         163 IQEIGYDCVADMWSL  177 (177)
Q Consensus       163 ~~~~~~~~~~Diws~  177 (177)
                      +....++.++|||||
T Consensus       206 ~~~~~~~~ksDI~Sf  220 (311)
T d1r0pa_         206 LQTQKFTTKSDVWSF  220 (311)
T ss_dssp             HHHCCCCHHHHHHHH
T ss_pred             HhcCCCCChhHhhhh
Confidence            998899999999996

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=6e-17  Score=115.36  Aligned_cols=77  Identities=26%  Similarity=0.419  Sum_probs=62.7

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC---CCccccccccccccccccC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~g~~~y~aPe~~~~  165 (177)
                      ..++.|+|..+++|+|++            ++||+++.++.+|++|||+++.+.....   ......|+..|+|||++.+
T Consensus       121 ~~gl~ylH~~~iiHrDik------------p~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  188 (273)
T d1u46a_         121 AEGMGYLESKRFIHRDLA------------ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT  188 (273)
T ss_dssp             HHHHHHHHHTTEECSCCC------------GGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHH
T ss_pred             HHHHHHhhhCCEeeeeec------------HHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhC
Confidence            577889999999999999            6699999999999999999987644322   2233567889999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..|+.++|||||
T Consensus       189 ~~~~~~~Di~S~  200 (273)
T d1u46a_         189 RTFSHASDTWMF  200 (273)
T ss_dssp             CEEEHHHHHHHH
T ss_pred             CCCCcchhhhhh
Confidence            899999999996

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.9e-16  Score=114.56  Aligned_cols=78  Identities=23%  Similarity=0.421  Sum_probs=65.9

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCccccccccccccccccC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~~  165 (177)
                      ...++.++|..+++|++++            ++||+++.++.+||+|||+++.+.....  ......||+.|+|||.+.+
T Consensus       142 ia~gl~~LH~~~ivHrDlk------------~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~  209 (308)
T d1p4oa_         142 IADGMAYLNANKFVHRDLA------------ARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  209 (308)
T ss_dssp             HHHHHHHHHHTTCBCSCCS------------GGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             HHHHHHHHhhCCeeeceEc------------CCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHcc
Confidence            3577889999999999999            6699999999999999999987644322  2233578999999999999


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      +.++.++|||||
T Consensus       210 ~~~~~~~Dv~S~  221 (308)
T d1p4oa_         210 GVFTTYSDVWSF  221 (308)
T ss_dssp             CCCCHHHHHHHH
T ss_pred             CCCCcccccccH
Confidence            999999999996

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.53  E-value=2.2e-16  Score=113.01  Aligned_cols=79  Identities=29%  Similarity=0.461  Sum_probs=62.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-  165 (177)
                      +...+++++|..+++|+|+|            |+||+++.++.+|++|||++.............+|++.|+|||.+.+ 
T Consensus       108 qi~~~L~~LH~~~IvHrDiK------------p~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~  175 (286)
T d1ob3a_         108 QLLNGIAYCHDRRVLHRDLK------------PQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS  175 (286)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTC
T ss_pred             HHHHHHHHhccCcEEecCCC------------CceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhCC
Confidence            34788899999999999999            67999999999999999999876554444455679999999999976 


Q ss_pred             CCCCccceEecC
Q psy3254         166 IGYDCVADMWSL  177 (177)
Q Consensus       166 ~~~~~~~Diws~  177 (177)
                      ..++.++||||+
T Consensus       176 ~~~~~~~Diwsl  187 (286)
T d1ob3a_         176 KKYSTTIDIWSV  187 (286)
T ss_dssp             CSCCTHHHHHHH
T ss_pred             CCCCcceeehhc
Confidence            457899999985

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=4.2e-16  Score=114.63  Aligned_cols=78  Identities=31%  Similarity=0.471  Sum_probs=65.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      +...+++++|..+++|+|+|            |+||+++.++ .+|++|||+++.+... ....+.+||+.|+|||++.+
T Consensus       130 qil~aL~yLH~~~IiHrDiK------------p~NILl~~~~~~~kl~DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~  196 (350)
T d1q5ka_         130 QLFRSLAYIHSFGICHRDIK------------PQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPELIFG  196 (350)
T ss_dssp             HHHHHHHHHHTTTEECCCCC------------GGGEEECTTTCCEEECCCTTCEECCTT-SCCCSCCSCTTSCCHHHHTT
T ss_pred             HHHHHHHHHHhcCCcccCCC------------cceEEEecCCCceeEecccchhhccCC-cccccccccccccChHHhhc
Confidence            45788999999999999999            6699998775 8999999999876543 23345689999999998875


Q ss_pred             -CCCCccceEecC
Q psy3254         166 -IGYDCVADMWSL  177 (177)
Q Consensus       166 -~~~~~~~Diws~  177 (177)
                       ..|+.++||||+
T Consensus       197 ~~~~~~~~DIwSl  209 (350)
T d1q5ka_         197 ATDYTSSIDVWSA  209 (350)
T ss_dssp             CSSCCTHHHHHHH
T ss_pred             ccCCCcceeeccc
Confidence             568999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.53  E-value=4e-16  Score=111.23  Aligned_cols=77  Identities=39%  Similarity=0.556  Sum_probs=65.0

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC--
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE--  165 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~--  165 (177)
                      ...+++++|..+++|+|++            |+|++++.++.+|++|||+++.+.... .....+||+.|+|||++.+  
T Consensus       119 i~~al~~lH~~~ivHrDlk------------p~Nill~~~~~~kl~DFG~a~~~~~~~-~~~~~~gt~~y~~PE~~~~~~  185 (277)
T d1phka_         119 LLEVICALHKLNIVHRDLK------------PENILLDDDMNIKLTDFGFSCQLDPGE-KLREVCGTPSYLAPEIIECSM  185 (277)
T ss_dssp             HHHHHHHHHHTTEECSCCS------------GGGEEECTTCCEEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHHH
T ss_pred             HHHHHHHHHHcCCcccccc------------cceEEEcCCCCeEEccchheeEccCCC-ceeeeeccCCCCCHHHhhccc
Confidence            4688889999999999999            669999999999999999998766532 3345689999999999862  


Q ss_pred             ----CCCCccceEecC
Q psy3254         166 ----IGYDCVADMWSL  177 (177)
Q Consensus       166 ----~~~~~~~Diws~  177 (177)
                          ..|+.++||||+
T Consensus       186 ~~~~~~~~~~~Diwsl  201 (277)
T d1phka_         186 NDNHPGYGKEVDMWST  201 (277)
T ss_dssp             CTTSCCBCTHHHHHHH
T ss_pred             cccCCCCCchheEccc
Confidence                357889999985

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=2.7e-16  Score=113.87  Aligned_cols=79  Identities=30%  Similarity=0.438  Sum_probs=67.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC--CCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA--KRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPe~~~  164 (177)
                      +...+++++|..+++|+|+|            ++||+++.++.++++|||+++.......  .....+||+.|+|||++.
T Consensus       153 qi~~gl~~LH~~~ivHrDLK------------p~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  220 (311)
T d1t46a_         153 QVAKGMAFLASKNCIHRDLA------------ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (311)
T ss_dssp             HHHHHHHHHHHTTCCCSCCS------------GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             HHHHHHHHHHhCCeeecccc------------cccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhc
Confidence            44788889999999999999            6799999999999999999987654322  233467899999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      ...++.++|||||
T Consensus       221 ~~~~~~~~DIwS~  233 (311)
T d1t46a_         221 NCVYTFESDVWSY  233 (311)
T ss_dssp             HCCCCHHHHHHHH
T ss_pred             CCCCCCcccccch
Confidence            8899999999996

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.2e-16  Score=115.61  Aligned_cols=78  Identities=29%  Similarity=0.350  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....++.++|..+++|++++            ++||+++.++.+|++|||+++...... ......||..|+|||.+.++
T Consensus       135 qia~gl~~lH~~~iiHrDlk------------p~NIL~~~~~~~kl~DfG~a~~~~~~~-~~~~~~gt~~y~aPE~l~~~  201 (309)
T d1fvra_         135 DVARGMDYLSQKQFIHRDLA------------ARNILVGENYVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYS  201 (309)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------GGGEEECGGGCEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHC
T ss_pred             HHHHHHHhhhcCCccccccc------------cceEEEcCCCceEEccccccccccccc-cccceecCCcccchHHhccC
Confidence            44788889999999999999            669999999999999999998654332 22345689999999999988


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .|+.++|||||
T Consensus       202 ~~~~~sDvwSf  212 (309)
T d1fvra_         202 VYTTNSDVWSY  212 (309)
T ss_dssp             EECHHHHHHHH
T ss_pred             CCCccceeehh
Confidence            99999999996

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.9e-16  Score=114.37  Aligned_cols=77  Identities=29%  Similarity=0.408  Sum_probs=59.4

Q ss_pred             HHHHhhhch--------hhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccC----CCcccccccc
Q psy3254          89 FEFLKFLSY--------DDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMA----KRNTVIGTPF  156 (177)
Q Consensus        89 ~~~l~~l~~--------~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~g~~~  156 (177)
                      ..++.++|.        .+++|+|++            |+||+++.++.+|++|||+++.......    .....+||+.
T Consensus       110 a~gl~~lH~~~~~~~~~~~IvHrDlK------------p~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~  177 (303)
T d1vjya_         110 ASGLAHLHMEIVGTQGKPAIAHRDLK------------SKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR  177 (303)
T ss_dssp             HHHHHHHHCCBCSTTCBCEEECSCCC------------GGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGG
T ss_pred             HHHHHHHHHhhhhhccCCCeeccccC------------ccceEEcCCCCeEEEecCccccccCCCcceeccccceecccC
Confidence            566677774        589999999            6699999999999999999987643211    2334689999


Q ss_pred             ccccccccCC------CCCccceEecC
Q psy3254         157 WMAPEVIQEI------GYDCVADMWSL  177 (177)
Q Consensus       157 y~aPe~~~~~------~~~~~~Diws~  177 (177)
                      |+|||++.+.      .++.++|||||
T Consensus       178 y~aPE~~~~~~~~~~~~~~~k~Di~S~  204 (303)
T d1vjya_         178 YMAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             GCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             cCChhhccccccccCCCcCcchhhhhh
Confidence            9999998753      25678999996

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=8.9e-16  Score=112.66  Aligned_cols=74  Identities=28%  Similarity=0.505  Sum_probs=64.1

Q ss_pred             HHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccC-CC
Q psy3254          89 FEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE-IG  167 (177)
Q Consensus        89 ~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~-~~  167 (177)
                      ..++.++|..+++|+|+|            |+||+++.++.++++|||+++.....   ....+||+.|+|||++.+ ..
T Consensus       131 ~~aL~~LH~~~IiHrDiK------------p~NIL~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~  195 (346)
T d1cm8a_         131 LKGLRYIHAAGIIHRDLK------------PGNLAVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMR  195 (346)
T ss_dssp             HHHHHHHHHTTEECCCCC------------GGGEEECTTCCEEECCCTTCEECCSS---CCSSCSCGGGCCTHHHHTTTC
T ss_pred             HHHHHHHHhCCCcccccC------------cchhhcccccccccccccceeccCCc---cccccccccccCHHHHcCCCC
Confidence            678889999999999999            66999999999999999999876543   345679999999999976 45


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      ++.++||||+
T Consensus       196 ~~~~~DiwSl  205 (346)
T d1cm8a_         196 YTQTVDIWSV  205 (346)
T ss_dssp             CCTTHHHHHH
T ss_pred             CCccchhhcc
Confidence            7899999985

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4e-16  Score=110.36  Aligned_cols=75  Identities=29%  Similarity=0.545  Sum_probs=58.6

Q ss_pred             hHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCCC
Q psy3254          88 DFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  167 (177)
Q Consensus        88 ~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~~  167 (177)
                      ...++.++|..+++|++++            ++|++++.++.++++|||+++.....   .....+|..|+|||++.+..
T Consensus       112 i~~al~ylH~~~ivH~dlk------------p~Nil~~~~~~~kl~dfg~s~~~~~~---~~~~~~~~~y~aPE~l~~~~  176 (262)
T d1byga_         112 VCEAMEYLEGNNFVHRDLA------------ARNVLVSEDNVAKVSDFGLTKEASST---QDTGKLPVKWTAPEALREKK  176 (262)
T ss_dssp             HHHHHHHHHHTTCCCSCCS------------GGGEEECTTSCEEECCCCC---------------CCTTTSCHHHHHHCC
T ss_pred             HHhhccccccCceeccccc------------hHhheecCCCCEeecccccceecCCC---CccccccccCCChHHHhCCC
Confidence            4678889999999999999            66999999999999999999865432   23456889999999999889


Q ss_pred             CCccceEecC
Q psy3254         168 YDCVADMWSL  177 (177)
Q Consensus       168 ~~~~~Diws~  177 (177)
                      |+.++|||||
T Consensus       177 ~t~~sDIwSf  186 (262)
T d1byga_         177 FSTKSDVWSF  186 (262)
T ss_dssp             CCHHHHHHHH
T ss_pred             CChHHHHHhH
Confidence            9999999996

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.50  E-value=9.5e-16  Score=111.71  Aligned_cols=78  Identities=24%  Similarity=0.462  Sum_probs=64.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCC-CeEEeeeecccccccccCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEG-HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      +...++.++|..+++|+|+|            |+||+++.++ .++++|||+|+..... ......+||+.|+|||.+.+
T Consensus       137 qil~aL~~LH~~gIvHrDiK------------p~NILi~~~~~~vkl~DFG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~  203 (328)
T d3bqca1         137 EILKALDYCHSMGIMHRDVK------------PHNVMIDHEHRKLRLIDWGLAEFYHPG-QEYNVRVASRYFKGPELLVD  203 (328)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEEETTTTEEEECCGGGCEECCTT-CCCCSCCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHhhccccccccc------------ccceEEcCCCCeeeecccccceeccCC-CcccccccCccccCcccccC
Confidence            34788899999999999999            6799998765 5899999999876543 23455689999999999876


Q ss_pred             C-CCCccceEecC
Q psy3254         166 I-GYDCVADMWSL  177 (177)
Q Consensus       166 ~-~~~~~~Diws~  177 (177)
                      . .|+.++||||+
T Consensus       204 ~~~~~~~~Diwsl  216 (328)
T d3bqca1         204 YQMYDYSLDMWSL  216 (328)
T ss_dssp             CCCCCTHHHHHHH
T ss_pred             CCCCCcccchhhh
Confidence            4 58999999985

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=8.7e-16  Score=111.65  Aligned_cols=78  Identities=32%  Similarity=0.423  Sum_probs=65.3

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCC--CCeEEeeeecccccccccCCCcccccccccccccccc
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTE--GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQ  164 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~  164 (177)
                      +...+++|+|..+++|+|++            |+||+++.+  ..++++|||+++..... ......+||+.|+|||.+.
T Consensus       110 qi~~al~yLH~~~iiHrDlK------------p~NIll~~~~~~~ikl~DFG~~~~~~~~-~~~~~~~~t~~y~ape~~~  176 (321)
T d1tkia_         110 QVCEALQFLHSHNIGHFDIR------------PENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQ  176 (321)
T ss_dssp             HHHHHHHHHHHTTEECCCCC------------GGGEEESSSSCCCEEECCCTTCEECCTT-CEEEEEESCGGGSCHHHHT
T ss_pred             HHHHHHHHHHHcCCCccccc------------ccceeecCCCceEEEEcccchhhccccC-Ccccccccccccccchhcc
Confidence            44788999999999999999            669999754  47999999999876433 2334567999999999999


Q ss_pred             CCCCCccceEecC
Q psy3254         165 EIGYDCVADMWSL  177 (177)
Q Consensus       165 ~~~~~~~~Diws~  177 (177)
                      +..|+.++||||+
T Consensus       177 ~~~~~~~~DiWSl  189 (321)
T d1tkia_         177 HDVVSTATDMWSL  189 (321)
T ss_dssp             TCEECHHHHHHHH
T ss_pred             CCCCCchhhcccH
Confidence            9999999999995

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.3e-15  Score=109.40  Aligned_cols=79  Identities=30%  Similarity=0.444  Sum_probs=64.2

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccc-cCCCccccccccccccccccC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDT-MAKRNTVIGTPFWMAPEVIQE  165 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~g~~~y~aPe~~~~  165 (177)
                      +...++.++|..+++|+|++            |+|++++.++.++++|||+++.+... .....+..|++.|+|||.+.+
T Consensus       137 Qi~~al~~lH~~~ivHrDiK------------p~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~  204 (322)
T d1vzoa_         137 EIVLALEHLHKLGIIYRDIK------------LENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG  204 (322)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTT
T ss_pred             HHHHHHHHhhcCCEEeccCC------------ccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhc
Confidence            34678889999999999999            66999999999999999999876432 223445679999999999976


Q ss_pred             C--CCCccceEecC
Q psy3254         166 I--GYDCVADMWSL  177 (177)
Q Consensus       166 ~--~~~~~~Diws~  177 (177)
                      .  .++.++||||+
T Consensus       205 ~~~~~~~ksDIWSl  218 (322)
T d1vzoa_         205 GDSGHDKAVDWWSL  218 (322)
T ss_dssp             CC---CTHHHHHHH
T ss_pred             CCcCCCchhhhHHH
Confidence            4  47789999995

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.4e-15  Score=106.93  Aligned_cols=79  Identities=28%  Similarity=0.427  Sum_probs=66.6

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +..++++++|..+++|+|+|            |+||+++.++.++++|||.++.............++..|+|||++...
T Consensus       109 q~~~aL~~lH~~~IvHrDiK------------P~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~  176 (292)
T d1unla_         109 QLLKGLGFCHSRNVLHRDLK------------PQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA  176 (292)
T ss_dssp             HHHHHHHHHHHTTEECCCCS------------GGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHhhcCCEeeeccc------------CcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccC
Confidence            34688899999999999999            679999999999999999998876554444556678899999998765


Q ss_pred             C-CCccceEecC
Q psy3254         167 G-YDCVADMWSL  177 (177)
Q Consensus       167 ~-~~~~~Diws~  177 (177)
                      . ++.++||||+
T Consensus       177 ~~~~~~~DiwSl  188 (292)
T d1unla_         177 KLYSTSIDMWSA  188 (292)
T ss_dssp             SCCCTHHHHHHH
T ss_pred             CCCCchhhcccc
Confidence            4 6899999995

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3.6e-15  Score=109.78  Aligned_cols=78  Identities=28%  Similarity=0.432  Sum_probs=58.5

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      ....+++++|..+++|+|+|            |+|++++.++.++++|||+++..... ......+||+.|+|||++.+.
T Consensus       127 qil~gl~~LH~~giiHrDlK------------P~Nil~~~~~~~kl~df~~~~~~~~~-~~~~~~~~t~~y~aPE~l~~~  193 (355)
T d2b1pa1         127 QMLCGIKHLHSAGIIHRDLK------------PSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILGM  193 (355)
T ss_dssp             HHHHHHHHHHHTTCCCSCCC------------GGGEEECTTCCEEECCCCC----------------CCTTCCHHHHTTC
T ss_pred             HHHHHHHHhhhcccccccCC------------ccccccccccceeeechhhhhccccc-cccccccccccccChhhhcCC
Confidence            34688889999999999999            67999999999999999998865443 234456799999999999999


Q ss_pred             CCCccceEecC
Q psy3254         167 GYDCVADMWSL  177 (177)
Q Consensus       167 ~~~~~~Diws~  177 (177)
                      .++.++||||+
T Consensus       194 ~~~~~~DiwSl  204 (355)
T d2b1pa1         194 GYKENVDIWSV  204 (355)
T ss_dssp             CCCTTHHHHHH
T ss_pred             CCCCCcccccc
Confidence            99999999985

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.9e-13  Score=97.70  Aligned_cols=67  Identities=40%  Similarity=0.843  Sum_probs=60.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.+..+.+.++..+.++.+..|..+|+++++||.+||..||.+|||+.|+++|||+..
T Consensus       208 mltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         208 MAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             HHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             HhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            5799999999999888888887777677667789999999999999999999999999999999974

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.4e-13  Score=97.34  Aligned_cols=67  Identities=39%  Similarity=0.846  Sum_probs=59.4

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.+..+.+.++..+..+.+..|..+|+++++||.+||..||.+|||+.|+++|||++.
T Consensus       209 mltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            5799999999998888887776666666657788999999999999999999999999999999975

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.4e-14  Score=104.09  Aligned_cols=76  Identities=28%  Similarity=0.498  Sum_probs=60.4

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCccccccccccccccccCC
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI  166 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPe~~~~~  166 (177)
                      +...++.++|..+++|+|+|            |+||+++.++.++++|||++......   ..+..||+.|+|||++.+.
T Consensus       129 qil~aL~~LH~~giiHrDiK------------p~NILi~~~~~~kl~dfg~a~~~~~~---~~~~~g~~~y~apE~~~~~  193 (348)
T d2gfsa1         129 QILRGLKYIHSADIIHRDLK------------PSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRAPEIMLNW  193 (348)
T ss_dssp             HHHHHHHHHHHTTCCCCCCC------------GGGEEECTTCCEEECCC----CCTGG---GSSSCHHHHTSCHHHHTTC
T ss_pred             HHHHHHHHHHhCCCcccccC------------CccccccccccccccccchhcccCcc---cccccccccccCchhhcCC
Confidence            34788889999999999999            66999999999999999999765432   3356799999999988765


Q ss_pred             -CCCccceEecC
Q psy3254         167 -GYDCVADMWSL  177 (177)
Q Consensus       167 -~~~~~~Diws~  177 (177)
                       .++.++||||+
T Consensus       194 ~~~~~~~DiwSl  205 (348)
T d2gfsa1         194 MHYNQTVDIWSV  205 (348)
T ss_dssp             SCCCTTHHHHHH
T ss_pred             ccCCcccchhhh
Confidence             46889999985

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.31  E-value=4.7e-14  Score=103.78  Aligned_cols=76  Identities=25%  Similarity=0.361  Sum_probs=62.6

Q ss_pred             chHHHHhhhch-hhHHHHHhhhchHHHHHHHHhhcceEeCCCCC------eEEeeeecccccccccCCCccccccccccc
Q psy3254          87 CDFEFLKFLSY-DDLQHRMANLDCEMEREIEQLRRNILLNTEGH------AKLADFGVAGQLTDTMAKRNTVIGTPFWMA  159 (177)
Q Consensus        87 ~~~~~l~~l~~-~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~------~~l~dfg~~~~~~~~~~~~~~~~g~~~y~a  159 (177)
                      ....++.++|. .+++|+|+|            |+||+++.++.      ++++|||.++....   .....+||+.|+|
T Consensus       133 qil~al~~lh~~~~IvHrDlK------------p~NIll~~~~~~~~~~~~kl~dfg~s~~~~~---~~~~~~gt~~y~a  197 (362)
T d1q8ya_         133 QLLLGLDYMHRRCGIIHTDIK------------PENVLMEIVDSPENLIQIKIADLGNACWYDE---HYTNSIQTREYRS  197 (362)
T ss_dssp             HHHHHHHHHHHTTCEECSCCS------------GGGEEEEEEETTTTEEEEEECCCTTCEETTB---CCCSCCSCGGGCC
T ss_pred             HHHHHHHHHhhhcCcccccCC------------hhHeeeeccCcccccceeeEeeccccccccc---ccccccccccccC
Confidence            34677889987 789999999            66999976653      89999999976443   2345679999999


Q ss_pred             cccccCCCCCccceEecC
Q psy3254         160 PEVIQEIGYDCVADMWSL  177 (177)
Q Consensus       160 Pe~~~~~~~~~~~Diws~  177 (177)
                      ||++....|+.++||||+
T Consensus       198 PE~~~~~~~~~~~DiwSl  215 (362)
T d1q8ya_         198 PEVLLGAPWGCGADIWST  215 (362)
T ss_dssp             HHHHHTCCCCTHHHHHHH
T ss_pred             hhhccccCCCccccccch
Confidence            999999999999999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.4e-13  Score=94.11  Aligned_cols=64  Identities=31%  Similarity=0.441  Sum_probs=56.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.+..+.+.++.+..   +..|..+|+++++||.+||..||.+|||+.|+++|||+..
T Consensus       197 ll~G~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         197 FLVGKPPFEANTYQETYKRISRVE---FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHTTC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcCC---CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            579999999999888888886663   2336778999999999999999999999999999999974

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=8.8e-13  Score=93.29  Aligned_cols=63  Identities=17%  Similarity=0.263  Sum_probs=55.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFI   65 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~   65 (177)
                      |+||++||.+.+..++..+|..+..+.+  |..+|+++++||.+||..||.+|||+.|+++|||+
T Consensus       207 l~tg~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         207 LCALMPPFTAFSQKELAGKIREGKFRRI--PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HhhCCCCCCCCCHHHHHHHHHcCCCCCC--CcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            5789999999998888888876654444  56789999999999999999999999999999996

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.3e-12  Score=92.49  Aligned_cols=65  Identities=26%  Similarity=0.482  Sum_probs=50.7

Q ss_pred             CccCCCCCCCCCH-HHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccc
Q psy3254           1 MAEGKPPYGDIHP-MRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~g~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~   66 (177)
                      |++|++||.+.+. .++..++..+..+. ..+...++++++||.+||..||.+|||+.|+++|||++
T Consensus       205 l~~g~~Pf~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         205 MATSEYPYSECQNAAQIYRRVTSGVKPA-SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHSSCTTTTCSSHHHHHHHHTTTCCCG-GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHCCCCCCCcccHHHHHHHHHcCCCCc-ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            5799999987654 44445554443322 22456799999999999999999999999999999985

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.2e-12  Score=92.12  Aligned_cols=71  Identities=23%  Similarity=0.345  Sum_probs=59.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhh------hcCcccccCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM------LNHEFIQVSPGGNIP   74 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~------l~h~~~~~~~~~~~~   74 (177)
                      |++|++||.+.+..+++.+|.+..   +..|..+|++++|||.+||..||.+|+|++|+      ++||||+...+..+.
T Consensus       203 ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l~  279 (288)
T d1uu3a_         203 LVAGLPPFRAGNEYLIFQKIIKLE---YDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH  279 (288)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHTTC---CCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGG
T ss_pred             HhhCCCCCCCcCHHHHHHHHHcCC---CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHhh
Confidence            579999999999999888887763   23367789999999999999999999999984      789999876555443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.23  E-value=2.6e-12  Score=91.18  Aligned_cols=67  Identities=34%  Similarity=0.421  Sum_probs=55.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.+..+.+.++..+.. +....+..+|+++++||.+||+.||.+||+++|+++|||++.
T Consensus       208 ml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         208 LLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             hccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            5789999999998888877775532 222223468999999999999999999999999999999974

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.22  E-value=5.6e-12  Score=90.73  Aligned_cols=67  Identities=24%  Similarity=0.259  Sum_probs=56.5

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.+..++..+|..... +....+..+|+++++||.+||..||.+|||+.|+++|||+..
T Consensus       202 ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         202 LLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             HHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence            5799999999998888888876543 222224678999999999999999999999999999999975

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.21  E-value=3.6e-12  Score=91.81  Aligned_cols=66  Identities=33%  Similarity=0.706  Sum_probs=57.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|.+||.+.+..+.+.++..+..+.+. +..+|+++++||.+||..||.+|||+.++++|||+..
T Consensus       207 l~~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~  272 (309)
T d1u5ra_         207 LAERKPPLFNMNAMSALYHIAQNESPALQ-SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (309)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCCS-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhCCCCCCC-CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcC
Confidence            57899999999988888888776655543 4578999999999999999999999999999999975

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=5.1e-12  Score=89.40  Aligned_cols=67  Identities=13%  Similarity=0.178  Sum_probs=49.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++|++||.+.+..................+..+|+++++||.+||..||.+|||++|+++|||++.
T Consensus       199 ml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         199 MLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             HHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence            5799999987654332222222222222224568999999999999999999999999999999974

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.17  E-value=9.9e-12  Score=91.00  Aligned_cols=68  Identities=19%  Similarity=0.309  Sum_probs=56.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |+||++||.+.+..+++.+|...... ....+..+|+++++||.+||..||.+|||+.|+|+|||++..
T Consensus       221 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         221 LLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             HHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            67999999999998888887765422 222245789999999999999999999999999999999753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=1.8e-11  Score=87.85  Aligned_cols=68  Identities=22%  Similarity=0.227  Sum_probs=52.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC------------------------CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK------------------------PPPSFREPDVWTPEFIDFVSRCLVKNPEERATA   56 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~------------------------~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~   56 (177)
                      |++|++||.+.+..+.+.+|...                        ..+....+..+|++++|||.+||..||.+|||+
T Consensus       208 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa  287 (305)
T d1blxa_         208 MFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA  287 (305)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCH
Confidence            57899999999887766554310                        000111134578999999999999999999999


Q ss_pred             HhhhcCcccccC
Q psy3254          57 SEMLNHEFIQVS   68 (177)
Q Consensus        57 ~~~l~h~~~~~~   68 (177)
                      .|+|+|||++..
T Consensus       288 ~e~L~Hpff~~i  299 (305)
T d1blxa_         288 YSALSHPYFQDL  299 (305)
T ss_dssp             HHHHTSGGGTTC
T ss_pred             HHHhcChhhcCc
Confidence            999999999864

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.16  E-value=1.6e-11  Score=87.28  Aligned_cols=67  Identities=24%  Similarity=0.343  Sum_probs=50.2

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--------------------------CCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--------------------------PPPSFREPDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--------------------------~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|++||.+.+..+.+.++...                          ..+....+..+|++++|||++||+.||.+||
T Consensus       194 l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~  273 (286)
T d1ob3a_         194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI  273 (286)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCc
Confidence            57899999998877665543210                          0000111245689999999999999999999


Q ss_pred             CHHhhhcCccccc
Q psy3254          55 TASEMLNHEFIQV   67 (177)
Q Consensus        55 ~~~~~l~h~~~~~   67 (177)
                      |+.|+++|||++.
T Consensus       274 s~~ell~Hp~f~~  286 (286)
T d1ob3a_         274 TAKQALEHAYFKE  286 (286)
T ss_dssp             CHHHHHTSGGGGC
T ss_pred             CHHHHhcCcccCc
Confidence            9999999999973

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.15  E-value=1.3e-11  Score=90.27  Aligned_cols=69  Identities=16%  Similarity=0.246  Sum_probs=56.6

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPP-SFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+.+.+|...... ....+..+|+++++||.+||..||.+|||+.|+++|||+....
T Consensus       218 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         218 LLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            57899999999998888888755321 1111246799999999999999999999999999999998643

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=6e-12  Score=91.04  Aligned_cols=65  Identities=20%  Similarity=0.370  Sum_probs=56.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH-hhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATAS-EMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~-~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+++.+|..+. +.+  |..+|+++++||++||..||.+||++. ++++|||++..
T Consensus       196 mltG~~PF~~~~~~~~~~~i~~~~-~~~--p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         196 MLIGQSPFHGQDEEELFHSIRMDN-PFY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC-CCC--CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCC-CCC--CccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            679999999999988888886653 233  667899999999999999999999996 89999999754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.7e-11  Score=89.29  Aligned_cols=65  Identities=26%  Similarity=0.415  Sum_probs=56.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+..+++.++..+.   +..|..+|++++|||.+||+.||.+|++     ++++++|||+...
T Consensus       198 ml~G~~pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         198 MMCGRLPFYNQDHERLFELILMEE---IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHCCCCCCCcCHHHHHHHHhcCC---CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            679999999999988888877663   3336789999999999999999999994     8999999999754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=6.6e-12  Score=89.74  Aligned_cols=69  Identities=20%  Similarity=0.238  Sum_probs=56.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPS-FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+.+.+|....... ...+..+|.++++||++||..||.+|||+.++++|||++...
T Consensus       209 ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  278 (293)
T d1jksa_         209 LLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  278 (293)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred             HHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            579999999999988888877653221 111356899999999999999999999999999999998543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.12  E-value=1.9e-11  Score=88.19  Aligned_cols=66  Identities=21%  Similarity=0.379  Sum_probs=57.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~~   69 (177)
                      |++|++||.+.+..+++.+|..+.   ...|..+|++++++|.+||..||.+|+     +++++++|||++...
T Consensus       194 mltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~  264 (316)
T d1fota_         194 MLAGYTPFYDSNTMKTYEKILNAE---LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV  264 (316)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHCC---CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             HHhCCCCCCCcCHHHHHHHHHcCC---CCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCC
Confidence            679999999999999888887663   233677899999999999999999996     899999999998653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.10  E-value=2.5e-11  Score=88.81  Aligned_cols=65  Identities=22%  Similarity=0.393  Sum_probs=56.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+....+.+|..+.   ...|..+|+++++||++||..||.+|+     +++++++||||+..
T Consensus       231 mltG~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         231 MAAGYPPFFADQPIQIYEKIVSGK---VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHCC---CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHhCCCCCCCcCHHHHHHHHhcCC---CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            679999999999988888887663   233677899999999999999999995     89999999999764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=4.5e-11  Score=85.49  Aligned_cols=70  Identities=20%  Similarity=0.290  Sum_probs=51.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CC------------------CCCC------CCCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PP------------------PSFR------EPDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~------------------~~~~------~~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|++||.+.+..+.+.++...  .+                  +...      ....+|.+++||+++||+.||.+||
T Consensus       196 m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~  275 (298)
T d1gz8a_         196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI  275 (298)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCc
Confidence            57899999998877766554320  00                  0000      0124689999999999999999999


Q ss_pred             CHHhhhcCcccccCCC
Q psy3254          55 TASEMLNHEFIQVSPG   70 (177)
Q Consensus        55 ~~~~~l~h~~~~~~~~   70 (177)
                      |++|+++|||++....
T Consensus       276 t~~ell~H~ff~~~~~  291 (298)
T d1gz8a_         276 SAKAALAHPFFQDVTK  291 (298)
T ss_dssp             CHHHHHTSGGGTTCCC
T ss_pred             CHHHHhCCHhhccCCC
Confidence            9999999999986543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.1e-11  Score=89.76  Aligned_cols=68  Identities=28%  Similarity=0.277  Sum_probs=56.1

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCC-CCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPS-FREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~-~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|.+||.+.+..+.+.+|.+..... ...+..+|+++++||.+||..||.+|||+.|+++|||+...
T Consensus       196 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         196 LLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            578999999999998888887653221 11124689999999999999999999999999999999753

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=8.3e-11  Score=84.11  Aligned_cols=70  Identities=19%  Similarity=0.282  Sum_probs=52.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCC--CC--------------CCCC---------CCCCCCHHHHHHHHHhcccCCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTK--PP--------------PSFR---------EPDVWTPEFIDFVSRCLVKNPEERAT   55 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~--~~--------------~~~~---------~~~~~s~~~~~~i~~~l~~~p~~R~~   55 (177)
                      |++|.+||.+.+..+.+.+|...  .+              ..+.         .....|++++|||.+||+.||.+|||
T Consensus       194 l~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s  273 (299)
T d1ua2a_         194 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  273 (299)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             HHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcC
Confidence            57899999999887777655321  00              0000         01245899999999999999999999


Q ss_pred             HHhhhcCcccccCCC
Q psy3254          56 ASEMLNHEFIQVSPG   70 (177)
Q Consensus        56 ~~~~l~h~~~~~~~~   70 (177)
                      +.|+|+|||++..+.
T Consensus       274 a~e~L~Hp~f~~~p~  288 (299)
T d1ua2a_         274 ATQALKMKYFSNRPG  288 (299)
T ss_dssp             HHHHHTSGGGTSSSC
T ss_pred             HHHHhCCHhhCCCCC
Confidence            999999999986543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.04  E-value=3.8e-11  Score=88.21  Aligned_cols=66  Identities=20%  Similarity=0.331  Sum_probs=50.8

Q ss_pred             CccCCCCCCCCCHH---HHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHhhhcCcccccCC
Q psy3254           1 MAEGKPPYGDIHPM---RAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERAT-----ASEMLNHEFIQVSP   69 (177)
Q Consensus         1 m~~g~~Pf~~~~~~---~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~-----~~~~l~h~~~~~~~   69 (177)
                      |+||++||.+.+..   .....+... .+.+  |..+|+++++||.+||..||.+|++     ++++++||||+...
T Consensus       199 mltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~  272 (364)
T d1omwa3         199 LLRGHSPFRQHKTKDKHEIDRMTLTM-AVEL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  272 (364)
T ss_dssp             HHHSSCSSCSSCSSCHHHHHHHSSSC-CCCC--CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcccC-CCCC--CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCC
Confidence            68999999876432   333334333 2333  6678999999999999999999999     79999999998643

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=2.8e-11  Score=85.62  Aligned_cols=59  Identities=24%  Similarity=0.329  Sum_probs=46.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+.      +..+   ....+..+|+++++||.+||..||.+|||++|+++|||++..
T Consensus       203 ll~g~~Pf~~~~~------i~~~---~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         203 MVCGDIPFEHDEE------IIRG---QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             HHHSSCSCCSHHH------HHHC---CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             HhhCCCCCCCchH------Hhhc---ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            5799999987432      2222   112256789999999999999999999999999999999753

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=6.7e-11  Score=85.54  Aligned_cols=39  Identities=46%  Similarity=0.847  Sum_probs=34.9

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCCCC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSPGG   71 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~~~   71 (177)
                      .+|.+++|||.+||..||.+|||++|+|+|||++.....
T Consensus       269 ~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~~~  307 (322)
T d1s9ja_         269 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE  307 (322)
T ss_dssp             TBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHHHS
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCCcc
Confidence            468999999999999999999999999999999865433

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.9e-10  Score=82.97  Aligned_cols=71  Identities=23%  Similarity=0.207  Sum_probs=52.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC-------------------CCCCCC-------CCCCCCCHHHHHHHHHhcccCCCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT-------------------KPPPSF-------REPDVWTPEFIDFVSRCLVKNPEERA   54 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~-------------------~~~~~~-------~~~~~~s~~~~~~i~~~l~~~p~~R~   54 (177)
                      |++|++||.+.+..+.+.++..                   ...+..       ......|++++|||.+||..||.+||
T Consensus       216 l~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~  295 (350)
T d1q5ka_         216 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL  295 (350)
T ss_dssp             HHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             hhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCc
Confidence            5789999999887666554421                   000000       01234689999999999999999999


Q ss_pred             CHHhhhcCcccccCCCC
Q psy3254          55 TASEMLNHEFIQVSPGG   71 (177)
Q Consensus        55 ~~~~~l~h~~~~~~~~~   71 (177)
                      |+.|+|+|||++.....
T Consensus       296 ta~e~L~Hp~f~~~~~~  312 (350)
T d1q5ka_         296 TPLEACAHSFFDELRDP  312 (350)
T ss_dssp             CHHHHHTSGGGGGGGCT
T ss_pred             CHHHHhcCHhhccccCC
Confidence            99999999999865443

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=3.5e-10  Score=82.40  Aligned_cols=69  Identities=22%  Similarity=0.295  Sum_probs=50.7

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC---------------------------CCCCCC-CCCCCCCHHHHHHHHHhcccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT---------------------------KPPPSF-REPDVWTPEFIDFVSRCLVKNPEE   52 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~---------------------------~~~~~~-~~~~~~s~~~~~~i~~~l~~~p~~   52 (177)
                      |++|++||.+.+....+.++..                           .....+ ......|++++|||.+||..||.+
T Consensus       212 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~  291 (346)
T d1cm8a_         212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ  291 (346)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTT
T ss_pred             HHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhH
Confidence            5789999998876655433221                           000111 112456899999999999999999


Q ss_pred             CCCHHhhhcCcccccCC
Q psy3254          53 RATASEMLNHEFIQVSP   69 (177)
Q Consensus        53 R~~~~~~l~h~~~~~~~   69 (177)
                      |||+.|+|+|||++...
T Consensus       292 R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         292 RVTAGEALAHPYFESLH  308 (346)
T ss_dssp             SCCHHHHHHSGGGTTTC
T ss_pred             CcCHHHHhcChhhCcCC
Confidence            99999999999998643

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=4e-10  Score=81.12  Aligned_cols=34  Identities=29%  Similarity=0.613  Sum_probs=31.8

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCcccccC
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQVS   68 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~   68 (177)
                      +++++|||.+||+.||.+|+|+.|+|.||||+..
T Consensus       278 ~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         278 DPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence            7789999999999999999999999999999853

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=2.4e-10  Score=82.95  Aligned_cols=66  Identities=24%  Similarity=0.362  Sum_probs=48.0

Q ss_pred             CccCCCCCCCCCHHHHH----hhCcCCCCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254           1 MAEGKPPYGDIHPMRAI----FMIPTKPPPSFREP--DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~----~~i~~~~~~~~~~~--~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |+||++||.+.+..+..    .++... ...++.+  ..+|+++++||.+||..||.+||++.|++.|||+..
T Consensus       206 lltg~~Pf~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  277 (335)
T d2ozaa1         206 LLCGYPPFYSNHGLAISPGMKTRIRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  277 (335)
T ss_dssp             HTTSSCSCEETTCC--------CCCSC-SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHT
T ss_pred             HhhCCCCCCCCCHHHHHHHHHHHHhcC-CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhC
Confidence            68999999887643332    333333 2222212  357999999999999999999999999999999974

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=5.7e-10  Score=81.24  Aligned_cols=69  Identities=16%  Similarity=0.225  Sum_probs=50.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC----------------------CCCC------CCCCCCHHHHHHHHHhcccCCCC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP----------------------PSFR------EPDVWTPEFIDFVSRCLVKNPEE   52 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~----------------------~~~~------~~~~~s~~~~~~i~~~l~~~p~~   52 (177)
                      |++|++||.+.+......++.....                      ....      .....|++++|||.+||..||.+
T Consensus       212 ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~  291 (348)
T d2gfsa1         212 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK  291 (348)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhh
Confidence            5789999999876655554432100                      0000      01246899999999999999999


Q ss_pred             CCCHHhhhcCcccccCC
Q psy3254          53 RATASEMLNHEFIQVSP   69 (177)
Q Consensus        53 R~~~~~~l~h~~~~~~~   69 (177)
                      |+|+.|+|+|||++...
T Consensus       292 R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         292 RITAAQALAHAYFAQYH  308 (348)
T ss_dssp             SCCHHHHHTSGGGTTTC
T ss_pred             CcCHHHHhcCHhhCCCC
Confidence            99999999999998643

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=1.4e-09  Score=77.19  Aligned_cols=36  Identities=25%  Similarity=0.304  Sum_probs=33.5

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      ..+|++++|||.+||+.||.+|||++|+|+|||++.
T Consensus       253 ~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         253 PKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence            356899999999999999999999999999999975

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=1.1e-10  Score=84.36  Aligned_cols=66  Identities=26%  Similarity=0.412  Sum_probs=49.3

Q ss_pred             CccCCCCCCCCCHHHHHhhCcC---CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHhhhcCcccccC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPT---KPPPSFREPDVWTPEFIDFVSRCLVKNPEERA-----TASEMLNHEFIQVS   68 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~---~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-----~~~~~l~h~~~~~~   68 (177)
                      |++|++||.+.+......++..   ...+.+  |...|+++++||++||..||.+|+     +++|+++||||+..
T Consensus       225 lltG~~PF~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i  298 (322)
T d1vzoa_         225 LLTGASPFTVDGEKNSQAEISRRILKSEPPY--PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  298 (322)
T ss_dssp             HHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC--CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcccCCCCC--cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence            5789999987654333222221   222233  567899999999999999999999     58999999999754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1.4e-09  Score=76.82  Aligned_cols=63  Identities=17%  Similarity=0.304  Sum_probs=51.6

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhh---hcCccc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM---LNHEFI   65 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~---l~h~~~   65 (177)
                      |+| |++||.+.+..++...+.++..+..  |..+++++++||.+||..||.+||++.++   |+++|.
T Consensus       203 llt~g~~Pf~~~~~~~~~~~i~~~~~~~~--p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         203 AFSYGQKPYRGMKGSEVTAMLEKGERMGC--PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HhhCCCCCCCCCCHHHHHHHHHcCCCCCC--CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            355 8999999998888877776654444  67789999999999999999999999987   455554

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.8e-09  Score=78.54  Aligned_cols=38  Identities=18%  Similarity=0.330  Sum_probs=34.5

Q ss_pred             CCCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          32 DVWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        32 ~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      ..+|+++++||.+||+.||.+|||+.++|+|||++...
T Consensus       265 ~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         265 PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence            45789999999999999999999999999999998543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.2e-09  Score=76.97  Aligned_cols=60  Identities=17%  Similarity=0.354  Sum_probs=51.3

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++ |.+||.+.+..+++.++..+..+.+  |..+|+++++||.+||..||.+|||+.+++.+
T Consensus       202 ~lt~g~~P~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         202 ILMHGVKPFQGVKNNDVIGRIENGERLPM--PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            345 9999999998888888877654444  67899999999999999999999999999865

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.7e-09  Score=75.70  Aligned_cols=60  Identities=18%  Similarity=0.254  Sum_probs=51.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |++||.+.+..++..++..+..+..  |...++++++||.+|+..||.+|||++++++|
T Consensus       194 l~t~g~~Pf~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         194 IYSLGKMPYERFTNSETAEHIAQGLRLYR--PHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHTTSCCTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHhCCCCCC--cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            456 8999999998888888876644333  67789999999999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=4.7e-10  Score=82.00  Aligned_cols=33  Identities=30%  Similarity=0.588  Sum_probs=31.5

Q ss_pred             CHHHHHHHHHhcccCCCCCCCHHhhhcCccccc
Q psy3254          35 TPEFIDFVSRCLVKNPEERATASEMLNHEFIQV   67 (177)
Q Consensus        35 s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~   67 (177)
                      |++++|||++||..||.+|||++|+|+|||++.
T Consensus       284 s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         284 ASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            678999999999999999999999999999985

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.1e-09  Score=76.70  Aligned_cols=61  Identities=15%  Similarity=0.229  Sum_probs=48.2

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |++||.+.+..+.+.++..+.. .+..|..+|+++++||.+||..||.+|||++++++|
T Consensus       259 mlt~g~~Pf~~~~~~~~~~~~~~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         259 IFSLGVNPYPGIPVDANFYKLIQNGF-KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HTTTSCCSSTTCCCSHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCC-CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            465 8999999877666666654432 223367789999999999999999999999999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.6e-09  Score=73.60  Aligned_cols=64  Identities=17%  Similarity=0.322  Sum_probs=52.7

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhh---hcCcccc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEM---LNHEFIQ   66 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~---l~h~~~~   66 (177)
                      |+| |++||.+.+..+++..|..+..+..  |..++++++++|.+||..||.+||++.++   |++.|+.
T Consensus       205 ~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         205 ALSYGQKPYKKMKGPEVMAFIEQGKRMEC--PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHTTSCCTTTTCCTHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCC--CCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            355 9999999988888888877655544  67789999999999999999999998887   5666654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=6.8e-09  Score=72.67  Aligned_cols=60  Identities=15%  Similarity=0.254  Sum_probs=50.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |++||...+..+...+|..+..+.+  |..+++++++||.+|+..||.+|||+.+++++
T Consensus       193 l~t~~~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         193 IYSFGRVPYPRIPLKDVVPRVEKGYKMDA--PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             HHTTSCCSCTTSCGGGHHHHHTTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHCCCCCCCCCCHHHHHHHHHcCCCCCC--CccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            456 8999999988888888876655555  66789999999999999999999999998764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=98.65  E-value=6.2e-09  Score=75.06  Aligned_cols=37  Identities=27%  Similarity=0.473  Sum_probs=34.0

Q ss_pred             CCCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          33 VWTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        33 ~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      .+|++++|||++||..||.+|+|++|+|+||||....
T Consensus       290 ~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         290 LVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             GCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            4689999999999999999999999999999998643

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.1e-08  Score=71.93  Aligned_cols=59  Identities=17%  Similarity=0.387  Sum_probs=48.9

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhh
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML   60 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l   60 (177)
                      |+| |++||.+.+..+.+.++...+. .++.+..+|.++++||.+||..||.+|||+.++.
T Consensus       207 mlt~G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         207 MFTYGQEPWIGLNGSQILHKIDKEGE-RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTSCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHhCCCCCCCCcCHHHHHHHHHhCCC-CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            456 8999999999988888765532 2233677899999999999999999999999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.64  E-value=3.8e-09  Score=74.48  Aligned_cols=65  Identities=26%  Similarity=0.489  Sum_probs=50.0

Q ss_pred             CccCCCCCCCCCHHHHHhhCcCCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCC-CHHhhhcCcccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIPTKPP-PSFREPDVWTPEFIDFVSRCLVKNPEERA-TASEMLNHEFIQ   66 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~~~~i~~~l~~~p~~R~-~~~~~l~h~~~~   66 (177)
                      |+||++||.+.+..+.+.++....+ +....+..+|+++++||.+||..||.+|| ++++++ |.|.+
T Consensus       207 lltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~-~~l~r  273 (277)
T d1o6ya_         207 VLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR-ADLVR  273 (277)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHH-HHHHH
T ss_pred             HHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHH-HHHHH
Confidence            6899999999998888877765543 22233467899999999999999999999 556554 55543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.1e-08  Score=73.26  Aligned_cols=60  Identities=18%  Similarity=0.252  Sum_probs=50.9

Q ss_pred             CccC-CCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEG-KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |++| .+||.+.+..+++.++..+..+..  |..+++++++||.+||..||.+||++.+++.+
T Consensus       219 ll~~~~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         219 IVSLGGTPYCGMTCAELYEKLPQGYRLEK--PLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHGGGTCCCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHhcCCCCC--CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4564 678999999998888877654444  66789999999999999999999999999976

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1.2e-08  Score=72.64  Aligned_cols=59  Identities=17%  Similarity=0.289  Sum_probs=49.8

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.+||.+.+..+++..+..+..+..  |..+|+++++||.+||..||.+|||+.++++
T Consensus       230 ll~~g~~p~~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         230 IFTLGGSPYPGVPVEELFKLLKEGHRMDK--PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHTTCCCCC--CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccCCCCCCCCCCHHHHHHHHHcCCCCCC--CccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            455 8999999998888777766654444  6788999999999999999999999999986

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.62  E-value=2e-08  Score=71.54  Aligned_cols=60  Identities=18%  Similarity=0.277  Sum_probs=50.1

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |++||.+.+..+++..+..+..+..  |..++.+++++|.+||..||.+||++.+++++
T Consensus       226 l~t~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         226 VMSYGERPYWDMTNQDVINAIEQDYRLPP--PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCC--CccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            455 8999999998888888876643333  56789999999999999999999999998764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.6e-08  Score=71.06  Aligned_cols=64  Identities=20%  Similarity=0.355  Sum_probs=51.4

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc--Ccccc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN--HEFIQ   66 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~--h~~~~   66 (177)
                      |+| |.|||...+..+.+.++..+..+..  |..++.++++|+.+||..||.+|||+.++++  ++|+.
T Consensus       203 llt~~~~~~~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         203 IVTHGRIPYPGMTNPEVIQNLERGYRMVR--PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCCC--cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            456 6788888888888887766544443  6778999999999999999999999999986  56654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=3.8e-08  Score=69.62  Aligned_cols=65  Identities=18%  Similarity=0.349  Sum_probs=51.6

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc--Cccccc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN--HEFIQV   67 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~--h~~~~~   67 (177)
                      |++ |.|||.+.+..+.+..+..+..+..  +..++.+++++|.+||..||.+||++++++.  ++|+..
T Consensus       207 l~t~~~p~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         207 LTTKGRVPYPGMVNREVLDQVERGYRMPC--PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCCC--CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            356 6777888888888877766544443  6778999999999999999999999999876  566654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=1.7e-08  Score=72.43  Aligned_cols=60  Identities=15%  Similarity=0.311  Sum_probs=48.9

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |.+||.+.+..++...+..+..+..  |..+++++++++.+|+..||.+||++.+++.|
T Consensus       206 l~t~g~~p~~~~~~~~~~~~i~~~~~~~~--p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         206 LMTFGSKPYDGIPASEISSILEKGERLPQ--PPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHTTSCCTTTTSCGGGHHHHHHHTCCCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHCCCCCCCCCCHHHHHHHHHcCCCCCC--CcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            456 8999999887776666655543333  67789999999999999999999999999877

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.7e-08  Score=69.50  Aligned_cols=60  Identities=22%  Similarity=0.332  Sum_probs=49.1

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+| |.|||.+.+..+.+..+..+..+..  |...++++++++.+||..||.+||++.+++++
T Consensus       195 l~t~~~~~~~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         195 VFSEGKIPYENRSNSEVVEDISTGFRLYK--PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             HHTTSCCTTCSCCHHHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHCCCCCCCCCCHHHHHHHHHhcCCCCC--ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            356 7888888888888777766543333  66789999999999999999999999999875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.43  E-value=8.1e-08  Score=68.33  Aligned_cols=59  Identities=15%  Similarity=0.273  Sum_probs=49.6

Q ss_pred             CccC-CCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEG-KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++| .+||.+.+..+.+..+..+..+..  |..+++++.+++.+||..||.+|||+.++++
T Consensus       235 ll~~~~~p~~~~~~~e~~~~v~~~~~~~~--p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         235 IFSYGLQPYYGMAHEEVIYYVRDGNILAC--PENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHccCCCCCCCCCHHHHHHHHHcCCCCCC--CccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            3566 689999999998888877654444  6778999999999999999999999999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=6.3e-08  Score=69.16  Aligned_cols=59  Identities=17%  Similarity=0.298  Sum_probs=49.9

Q ss_pred             CccC-CCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEG-KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |+|| .+||.+.+..+.+..+..+..+..  |..+++.++++|.+|+..||.+|||+.++++
T Consensus       228 l~t~~~~p~~~~~~~~~~~~i~~~~~~~~--p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         228 IATLAEQPYQGLSNEQVLRFVMEGGLLDK--PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             HHHTSCCTTTTSCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhCCCCCC--cccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            4566 699999999888888877654443  6778999999999999999999999999986

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=2.9e-08  Score=69.90  Aligned_cols=62  Identities=19%  Similarity=0.404  Sum_probs=45.8

Q ss_pred             CccCCCCCCCCCHHHHHhhCc-CCC-CCCC-CCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIP-TKP-PPSF-REPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~-~~~-~~~~-~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+||++||.+.+....+..+. ++. .+.+ ..+..+++++++||.+||..||.+|||+.+++.+
T Consensus       202 l~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         202 LMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            578999999876554443333 221 2222 2245679999999999999999999999999876

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=1.7e-07  Score=66.29  Aligned_cols=59  Identities=17%  Similarity=0.282  Sum_probs=43.9

Q ss_pred             CccC-CCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAEG-KPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~g-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++| .|||.+.+.......+..+..+..  |..+++++++||.+||..||.+|||+.++++
T Consensus       209 ll~~~~p~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         209 IATYGMSPYPGIDLSQVYELLEKDYRMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCcchHHHHHHHHhcCCCCCC--CccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            4564 556666666665555544433333  6778999999999999999999999999965

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.33  E-value=2.5e-07  Score=67.19  Aligned_cols=36  Identities=31%  Similarity=0.477  Sum_probs=32.9

Q ss_pred             CCHHHHHHHHHhcccCCCCCCCHHhhhcCcccccCC
Q psy3254          34 WTPEFIDFVSRCLVKNPEERATASEMLNHEFIQVSP   69 (177)
Q Consensus        34 ~s~~~~~~i~~~l~~~p~~R~~~~~~l~h~~~~~~~   69 (177)
                      .+++++|||.+||..||.+|||+.|+|+||||+...
T Consensus       300 ~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         300 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             cCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence            468899999999999999999999999999998543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=9.7e-08  Score=68.23  Aligned_cols=60  Identities=17%  Similarity=0.326  Sum_probs=45.7

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |+| |.|||.+.+..+.+.++...+... ..|..+++++++||.+||..||.+||++.+++.
T Consensus       240 llt~g~p~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         240 LFSLGSSPYPGMPVDSKFYKMIKEGFRM-LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHTTTCCSSTTCCSSHHHHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCC-CCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            456 788888887766665555432222 225678999999999999999999999999885

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=8e-08  Score=68.23  Aligned_cols=60  Identities=23%  Similarity=0.313  Sum_probs=45.2

Q ss_pred             CccC-CCCCCCCCHHHHHhhCc-CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEG-KPPYGDIHPMRAIFMIP-TKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g-~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+|| .+||.+.+..+.+.++. .+..+..  |..++++++++|.+||..||.+|||+.++++|
T Consensus       229 llt~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         229 IFSLGASPYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHTTSCCSSTTCCCSHHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4564 68998876555444333 3333333  67789999999999999999999999999976

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=4.6e-07  Score=63.75  Aligned_cols=59  Identities=12%  Similarity=0.247  Sum_probs=46.6

Q ss_pred             Ccc-CCCCCCCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhc
Q psy3254           1 MAE-GKPPYGDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLN   61 (177)
Q Consensus         1 m~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~   61 (177)
                      |++ |.|||.+.+..+++..+..+..+..  |..++.+++++|.+||..||.+||++.+++.
T Consensus       206 l~t~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         206 VMTYGERPYWELSNHEVMKAINDGFRLPT--PMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCC--CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHhCCCCccccCCHHHHHHHHhccCCCCC--chhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            355 5777777777777777665544443  5678999999999999999999999999876

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.1e-07  Score=66.46  Aligned_cols=60  Identities=13%  Similarity=0.241  Sum_probs=41.2

Q ss_pred             CccCCCCC-CCCCHHHHHhhCcCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254           1 MAEGKPPY-GDIHPMRAIFMIPTKPPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus         1 m~~g~~Pf-~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      |+||..|| .+.+..+....+..+..+..  |...++++++||.+|+..||.+||++.+++++
T Consensus       227 l~t~~~p~~~~~~~~~~~~~i~~g~~~~~--p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         227 LMTRGAPPYPDVNTFDITVYLLQGRRLLQ--PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHTTSCCSCC------CHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHCCCCCCCCCCHHHHHHHHHcCCCCCC--cccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            45754454 45555555555555544433  66789999999999999999999999999976

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.92  E-value=8.2e-07  Score=58.77  Aligned_cols=69  Identities=14%  Similarity=0.089  Sum_probs=48.7

Q ss_pred             chHHHHhhhchhhHHHHHhhhchHHHHHHHHhhcceEeCCCCCeEEeeeecccccccccCCCcccccccccccc------
Q psy3254          87 CDFEFLKFLSYDDLQHRMANLDCEMEREIEQLRRNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAP------  160 (177)
Q Consensus        87 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~i~~l~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aP------  160 (177)
                      ...+++.++|..+++|+|+|            |+||+++.+ .++++|||.++....+...        .|...      
T Consensus       111 ql~~~l~~lH~~giiHrDiK------------P~NILv~~~-~~~liDFG~a~~~~~~~~~--------~~l~rd~~~~~  169 (191)
T d1zara2         111 MILEEVAKFYHRGIVHGDLS------------QYNVLVSEE-GIWIIDFPQSVEVGEEGWR--------EILERDVRNII  169 (191)
T ss_dssp             HHHHHHHHHHHTTEECSCCS------------TTSEEEETT-EEEECCCTTCEETTSTTHH--------HHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCEEEccCC------------hhheeeeCC-CEEEEECCCcccCCCCCcH--------HHHHHHHHHHH
Confidence            44788889999999999999            669999865 4899999999765433211        11111      


Q ss_pred             ccccCCCCCccceEecC
Q psy3254         161 EVIQEIGYDCVADMWSL  177 (177)
Q Consensus       161 e~~~~~~~~~~~Diws~  177 (177)
                      +.+ ...|+.++|+||.
T Consensus       170 ~~f-~r~y~~~~d~~s~  185 (191)
T d1zara2         170 TYF-SRTYRTEKDINSA  185 (191)
T ss_dssp             HHH-HHHHCCCCCHHHH
T ss_pred             HHH-cCCCCCcccHHHH
Confidence            111 3467888999983

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.62  E-value=2e-06  Score=60.73  Aligned_cols=66  Identities=14%  Similarity=0.206  Sum_probs=40.9

Q ss_pred             CccCCCCCCCCCHHHHHhhCc---CC--CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHh---hhcCcccc
Q psy3254           1 MAEGKPPYGDIHPMRAIFMIP---TK--PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASE---MLNHEFIQ   66 (177)
Q Consensus         1 m~~g~~Pf~~~~~~~~~~~i~---~~--~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~---~l~h~~~~   66 (177)
                      |++|++||.+.+.......+.   ..  ..+.-..+..+|+++.++|.+|+..||.+||++.+   +|++.|..
T Consensus       206 l~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         206 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             HHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            578999998765443322211   10  01111113568899999999999999999999875   46666554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=9.9e-05  Score=52.01  Aligned_cols=27  Identities=19%  Similarity=0.254  Sum_probs=24.2

Q ss_pred             HHHHHHHHHhcccCCCCCCCHHhhhcC
Q psy3254          36 PEFIDFVSRCLVKNPEERATASEMLNH   62 (177)
Q Consensus        36 ~~~~~~i~~~l~~~p~~R~~~~~~l~h   62 (177)
                      ..+.+++.+||..||.+|||+.|++++
T Consensus       265 ~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         265 RVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            468999999999999999999998763

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=96.04  E-value=0.0006  Score=47.59  Aligned_cols=60  Identities=12%  Similarity=0.107  Sum_probs=38.9

Q ss_pred             CccCCCCCCCCC---HHHHHhhCcCC--CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHhhh
Q psy3254           1 MAEGKPPYGDIH---PMRAIFMIPTK--PPPSFREPDVWTPEFIDFVSRCLVKNPEERATASEML   60 (177)
Q Consensus         1 m~~g~~Pf~~~~---~~~~~~~i~~~--~~~~~~~~~~~s~~~~~~i~~~l~~~p~~R~~~~~~l   60 (177)
                      |++|.+||.+.+   ....+.++...  ..+.-..+..+++++.+++..|+..+|.+||+.+.+.
T Consensus       206 lltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         206 FLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence            578999997653   22333222211  0111111345789999999999999999999877654