BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3261
(342 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328697944|ref|XP_001951372.2| PREDICTED: 28S ribosomal protein S29, mitochondrial-like
[Acyrthosiphon pisum]
Length = 376
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 230/339 (67%), Gaps = 2/339 (0%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H QD+ KFYT+ + S IF+ GG+ + F EQT +F E++++IR LE++ LKS T+
Sbjct: 37 HDSQDVSKFYTIDPKTVSNIFQTGGLPKPFTEQTNMFAETALMIRQPALEVINSLKS-TD 95
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYP-KEVSHSLTKE 121
F +P+ R++LYG+ G GKS++L + L YA+ + ++L HIP+V W Y KEV+ S +K
Sbjct: 96 FQKPAVRYLLYGQTGSGKSLSLAHILHYAYSSKFILYHIPYVPIWLKYDRKEVNWSSSKN 155
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM D+ + AA WL+HF QN L + LTTSQ+YVWS RE + L L+ HGI R
Sbjct: 156 GMADIPLIAAQWLKHFVHQNGALLNELNLTTSQDYVWSQRETTPQGTTLNELVTHGINRA 215
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYA D +D+L E+K + C+ V +DG+N+FF EKT+ K ED+ KV P ++T+ ++
Sbjct: 216 KYACDCMDILLNELKAHCSNNRCKMLVAIDGFNAFFNEKTDLKTEDRVKVTPQQITMVQT 275
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
++ V SDWNNGAI++ SPRA L +RESHLP+Y++ + GFE IDPF+P+ VPEL+ E
Sbjct: 276 GLSAVLSDWNNGAIIMVTSPRAALNTKRESHLPIYLIGRQGFEHIDPFIPVMVPELSTVE 335
Query: 302 FHNLLNLYESKKWLQTSEGREEIAFLTKRVPQKMYEFCS 340
F+N+L+ YE K+WLQ GR+E+ FLT ++P + C+
Sbjct: 336 FNNMLDYYEEKRWLQKPGGRKELEFLTSKLPADLMARCA 374
>gi|157116602|ref|XP_001658571.1| mitochondrial ribosomal protein, S29, putative [Aedes aegypti]
gi|108876397|gb|EAT40622.1| AAEL007668-PA [Aedes aegypti]
Length = 385
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 221/340 (65%), Gaps = 3/340 (0%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
HS+ L +FYT+P +VR +F GG + F +Q + FNES +++R +EL+ Y+ + +
Sbjct: 45 HSRSHLSRFYTIPADVRKQVFSYGGFPKTFEKQIKTFNESCLMVREPAVELINYMNA-AD 103
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+ +P+ RFVLYG+ GVGKS+ L + L Y + ++LVH+PWV W KE ++S+T EG
Sbjct: 104 YSKPANRFVLYGKDGVGKSIVLAHLLHYGYNQEFVLVHVPWVPNWMKRAKETANSITHEG 163
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
+DL +D A WL HF+ QN+K L L S++YVW+ RE + A P+ LI+HGI R K
Sbjct: 164 CLDLPLDGAAWLIHFKNQNSKLLAKLDLKVSRDYVWTKRETTPAGAPMLELIDHGINRAK 223
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
++ D + L E+K+ ST+G +T V +DG+N+FF +T E+K +V P +VTLT+
Sbjct: 224 FSCDAIAALLGELKQQSTQGKLKTMVIIDGFNAFFHPQTRITTENKVRVTPDKVTLTKPF 283
Query: 243 INLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEF 302
+++ + DW NG +LA+ A DR ES LP+Y L++ GFE +DPFVPI V ++EE+
Sbjct: 284 LDITRPDWCNGVCILAVDRMALTEDRMESELPMYQLRREGFEHLDPFVPIRVDNYSEEEY 343
Query: 303 HNLLNLYESKKWLQTSEG--REEIAFLTKRVPQKMYEFCS 340
++ + Y ++KW+QT+E +E+ FL+ R P ++ E C+
Sbjct: 344 YSCVQYYLNRKWIQTTEQGFDKELEFLSGRNPFELMELCA 383
>gi|195585700|ref|XP_002082618.1| GD25129 [Drosophila simulans]
gi|194194627|gb|EDX08203.1| GD25129 [Drosophila simulans]
Length = 392
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 212/340 (62%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E+ +++RN LEL+ Y+K
Sbjct: 51 EHSAMQVAKFYTIPAEQKKQIFSGGGLPKQYEQQIKTFTEACLMVRNPALELLQYIKD-G 109
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYGE+G GK++ + + L Y N++LLVH+PW W PKE S++ +E
Sbjct: 110 DLTKPVVRYVLYGENGTGKTLTMAHVLHYGALNDFLLVHVPWAPNWMKRPKEASNAAGQE 169
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN L+ +L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 170 GMIDLPFDAAAWLVHFKAQNGPLLQRLQLKTSKEYVWSKRESTPAGSSLIELVEHGIARI 229
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L E+K+LST G C+ V +DG+N+FF T ++K V P RVTLT+
Sbjct: 230 KYASETTAALIAELKQLSTAGQCKVMVAIDGFNAFFHPVTRIFSDNKQLVTPDRVTLTQP 289
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG VL++ A +S++P Y+L K GFE +DPFVPIHV D+E
Sbjct: 290 FLDITNYDWTNGVCVLSVDKIAMTEGYMDSYMPRYLLGKEGFEHLDPFVPIHVENYTDKE 349
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
FH+ +N Y + W+ +T +G EE + F++ + P + +
Sbjct: 350 FHSYINYYLDRHWINKTPQGFEEQLKFMSNKNPYSLMQLV 389
>gi|195346722|ref|XP_002039906.1| GM15640 [Drosophila sechellia]
gi|194135255|gb|EDW56771.1| GM15640 [Drosophila sechellia]
Length = 390
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 212/340 (62%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E+ +++RN LEL+ Y+K
Sbjct: 49 EHSAMQVAKFYTIPAEQKKQIFGGGGLPKQYEQQIKTFTEACLMVRNPALELLQYIKD-G 107
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYGE+G GK++ + + L Y N++LLVH+PW W PKE S++ +E
Sbjct: 108 DLTKPVVRYVLYGENGTGKTLTMAHVLHYGALNDFLLVHVPWAPNWMKRPKEASNAAGQE 167
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN L+ +L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 168 GMIDLPFDAAAWLVHFKAQNGPLLQRLQLKTSKEYVWSKRESTPAGSSLIELVEHGIARI 227
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L E+K+LST G C+ V +DG+NSFF T ++K V P RVTLT+
Sbjct: 228 KYASETTAALIAELKQLSTAGQCKVMVAIDGFNSFFHPVTRIFSDNKQLVTPDRVTLTQP 287
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG VL++ A +S++P Y+L K GFE +DPFVPIHV D+E
Sbjct: 288 FLDITNYDWTNGVCVLSVDKIAMTEGYMDSYMPRYLLGKEGFEHLDPFVPIHVENYTDKE 347
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
FH+ ++ Y + W+ +T +G EE + F++ + P + +
Sbjct: 348 FHSYISYYLDRHWINKTPQGFEEQLKFMSNKNPYSLMQLV 387
>gi|17647691|ref|NP_523811.1| mitochondrial ribosomal protein S29 [Drosophila melanogaster]
gi|7291419|gb|AAF46846.1| mitochondrial ribosomal protein S29 [Drosophila melanogaster]
gi|17862624|gb|AAL39789.1| LD41023p [Drosophila melanogaster]
Length = 392
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 212/340 (62%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E+ +++RN LEL+ Y+K
Sbjct: 51 EHSAMQVAKFYTIPAEQKKQIFTGGGLPKQYEQQIKTFTEACLMVRNPALELLQYIKD-G 109
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYGE+G GK++ + + L Y N++LLVH+PW W PKE S++ +E
Sbjct: 110 DLTKPVVRYVLYGENGTGKTLTMAHVLHYGALNDFLLVHVPWAPNWMKRPKEASNAAGQE 169
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN L+ +L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 170 GMIDLPFDAAAWLVHFKTQNGPLLQRLQLKTSKEYVWSKRESTPAGSSLIELVEHGIARI 229
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L E+K+LST G C+ V +DG+N+FF T ++K V P RVTLT+
Sbjct: 230 KYASETTAALIAELKQLSTAGQCKVMVAIDGFNAFFHPVTRIFSDNKQLVTPDRVTLTQP 289
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG +L++ A +S++P Y+L K GFE +DPFVPIHV D+E
Sbjct: 290 FLDITNYDWTNGVCILSVDKIAMTEGHMDSYMPRYLLGKEGFEHLDPFVPIHVENYTDKE 349
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
FH+ ++ Y + W+ +T +G EE + F++ + P + +
Sbjct: 350 FHSYISYYLDRHWINKTPQGFEEQLKFMSNKNPYSLMQLV 389
>gi|170051615|ref|XP_001861844.1| mitochondrial 28S ribosomal protein S29 [Culex quinquefasciatus]
gi|167872800|gb|EDS36183.1| mitochondrial 28S ribosomal protein S29 [Culex quinquefasciatus]
Length = 383
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 215/341 (63%), Gaps = 3/341 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+H++ L +FYT+P +VR IF GG + + +Q + FNE+ +++R +EL+G+L + T
Sbjct: 42 RHNQSHLSRFYTIPADVRKQIFAHGGFPKTYEKQIKTFNEACLMVRPAAVELIGHLNA-T 100
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+F RP+ RFVLYGE G GKSM L + L Y ++LVH+PWV W KE + S T+E
Sbjct: 101 DFRRPANRFVLYGEDGAGKSMVLAHLLHYGFCQEFVLVHVPWVPNWMKRAKETAISGTRE 160
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G +DL +D A WL HF+ QN L L S++YVWS RE + A P+ LI+HGI R
Sbjct: 161 GCLDLPLDGAAWLVHFKNQNAPLLAKLDLKVSRDYVWSKRETTPAGAPMLELIDHGINRA 220
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
K++ D + L E+K+ ST G +T V +DG+N+FF T E+K +V P ++TLTR
Sbjct: 221 KFSCDAIAALLGELKEQSTAGRVKTMVVIDGFNAFFHPHTRILTENKVRVTPDKLTLTRP 280
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ +DW NG ++ + A DR ES LP+Y L++ GFE +DPFVP+ V ++EE
Sbjct: 281 FLDITGADWCNGVCIVTVDRMALTEDRMESTLPMYQLRREGFEHLDPFVPVRVDNYSEEE 340
Query: 302 FHNLLNLYESKKWLQ-TSEG-REEIAFLTKRVPQKMYEFCS 340
FH+ + Y ++KW+Q T +G +E+ FL+ + P K+ + +
Sbjct: 341 FHSAVQYYLNRKWIQITKDGFDKELEFLSGKNPFKLMQLSA 381
>gi|27462217|gb|AAO15385.1|AF348494_1 DAP3 [Drosophila melanogaster]
Length = 390
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 212/340 (62%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E+ +++RN LEL+ Y+K
Sbjct: 49 EHSAMQVAKFYTIPAEQKKQIFTGGGLPKQYEQQIKTFTEACLMVRNPALELLQYIKD-G 107
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYGE+G GK++ + + L Y N++LLVH+PW W PKE S++ +E
Sbjct: 108 DLTKPVVRYVLYGENGTGKTLTMAHVLHYGALNDFLLVHVPWAPNWMKRPKEASNAAGQE 167
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN L+ +L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 168 GMIDLPFDAAAWLVHFKTQNGPLLQRLQLKTSKEYVWSKRESTPAGSSLIELVEHGIARI 227
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L E+K+LST G C+ V +DG+N+FF T ++K V P RVTLT+
Sbjct: 228 KYASETTAALIAELKQLSTAGKCKVMVAIDGFNAFFHPVTRIFSDNKQLVTPDRVTLTQP 287
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG +L++ A +S++P Y+L K GFE +DPFVPIHV D+E
Sbjct: 288 FLDITNYDWTNGVCILSVDKIAMTEGHMDSYMPRYLLGKEGFEHLDPFVPIHVENYTDKE 347
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
FH+ ++ Y + W+ +T +G EE + F++ + P + +
Sbjct: 348 FHSYISYYLDRHWINKTPQGFEEQLKFMSNKNPYSLMQLV 387
>gi|194754910|ref|XP_001959735.1| GF13020 [Drosophila ananassae]
gi|190621033|gb|EDV36557.1| GF13020 [Drosophila ananassae]
Length = 388
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 214/340 (62%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E+ +++RN LE++ Y+K
Sbjct: 47 EHSALQVAKFYTIPAEQKKQIFAGGGLPKQYEQQIKTFTEACLMVRNPALEVLEYIKK-A 105
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R++LYGE+G GK++ + + L Y N++LLVH+PW W PKE S++ +E
Sbjct: 106 DLSKPVVRYLLYGENGTGKTLTMAHVLHYGALNDFLLVHVPWAPNWMKRPKEASNAAGQE 165
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN+K L+ L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 166 GMIDLPFDAAAWLVHFKGQNSKLLQRLELKTSKEYVWSKRESTPAGSTLLELVEHGIARI 225
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L +E+K LST G C+ V +DGYN+FF T ++K +V P ++TLT
Sbjct: 226 KYASETTAALISELKLLSTAGKCKVMVAIDGYNAFFHPVTRIFSDNKQRVTPDKITLTHP 285
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+N+ + DW NG +L++ A +S++P Y+L GFE +DPFVPIHV +D+E
Sbjct: 286 FLNITRYDWTNGVCILSVDKIAMTEGHMDSYMPRYLLGTEGFEHLDPFVPIHVENYSDKE 345
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
FH+ ++ Y + W+ +T +G EE + F++ + P + +
Sbjct: 346 FHSYISYYLDRHWINKTPQGFEEQLKFMSNKNPYALMQLV 385
>gi|195154459|ref|XP_002018139.1| GL16923 [Drosophila persimilis]
gi|194113935|gb|EDW35978.1| GL16923 [Drosophila persimilis]
Length = 392
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 217/340 (63%), Gaps = 4/340 (1%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E +++R+ LEL+ Y+K+
Sbjct: 52 EHSALHVAKFYTIPVEQKKQIFTGGGLPKQYEQQIKTFTEPCLMVRSPALELLHYIKN-A 110
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYG++GVGK++ + + L Y N++LLVH+PW W PKE S++ ++E
Sbjct: 111 DLTKPVVRYVLYGDNGVGKTLTMAHVLHYGAINDFLLVHVPWAPNWMKRPKEASNA-SQE 169
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN K L+ +L T++EYVWS RE + A L L+EHGI R+
Sbjct: 170 GMLDLPFDAAAWLVHFKTQNAKLLQQLQLKTNKEYVWSKRESTPAGSSLIELVEHGIARI 229
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYA+D L +E+K+LST G C+ V +DG+N+FF +T ++K +V P R+TLT+
Sbjct: 230 KYATDTTVALISELKQLSTAGQCKIMVAIDGFNAFFHPETRIFSDNKQRVTPDRITLTQP 289
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG +L++ A +S++P Y+L GFE IDPFVPIHV D+E
Sbjct: 290 FLDITNYDWTNGVCILSVDKIAMTEGYMDSYMPRYLLGTEGFEHIDPFVPIHVENYTDKE 349
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
FHN +N Y + W+ +T +G EE + F++ + P + +
Sbjct: 350 FHNYINYYLDRHWINKTPQGFEEQLKFMSNKNPYTLMQLV 389
>gi|195488691|ref|XP_002092421.1| GE11679 [Drosophila yakuba]
gi|194178522|gb|EDW92133.1| GE11679 [Drosophila yakuba]
Length = 392
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 212/340 (62%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFY++P E + IF GG+ + + +Q + F E+ +++RN LEL+ Y+K
Sbjct: 51 EHSALQVAKFYSIPAEQKKLIFSGGGLPKQYEQQIKTFTEACLMVRNPALELLQYIKD-G 109
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYGE+G GK++ + + L Y N++LLVH+PW W PKE S++ +E
Sbjct: 110 DLTKPVVRYVLYGENGTGKTLTMAHVLHYGALNDFLLVHVPWAPNWMKRPKEASNAAGQE 169
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN L+ +L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 170 GMIDLPFDAAAWLVHFKNQNGPLLQRLQLKTSKEYVWSKRESTPAGSSLIELVEHGIARI 229
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L E+K+LST G C+ V +DG+N+FF T ++K V P RVTLT+
Sbjct: 230 KYASETTAALIAELKQLSTAGQCKIMVAIDGFNAFFHPVTRIFSDNKQLVTPDRVTLTQP 289
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG +L++ A ES++P Y+L K GFE +DPFVPIHV D+E
Sbjct: 290 FLDITNYDWTNGVCILSVDKIAMTEGHMESYMPRYLLGKEGFEHLDPFVPIHVENYTDKE 349
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
FH+ ++ Y + W+ +T +G EE + F++ + P + +
Sbjct: 350 FHSYISYYLDRHWINKTPQGFEEQLKFMSNKNPYSLMQLV 389
>gi|312383435|gb|EFR28526.1| hypothetical protein AND_03446 [Anopheles darlingi]
Length = 387
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 213/341 (62%), Gaps = 3/341 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+H L +FYT+P + R IF GG+ + + Q + FNE +++R +E++ +L+ +T
Sbjct: 46 RHGSSTLGRFYTIPADARKQIFTYGGLPKSYERQIKTFNECCLMVRRPAVEIIKHLR-VT 104
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+F RP RFVLYGE G GKS+ L + L Y + Y+LVH+PW+ W PKE +++ + E
Sbjct: 105 DFSRPINRFVLYGEDGAGKSLTLAHLLHYGYPQQYVLVHVPWLPNWLKRPKETANANSVE 164
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G +DL +D A WL HF+ QN LE LT S++YVW+ RE + A PL AL+EHGI+R
Sbjct: 165 GALDLPLDGAAWLVHFKNQNGALLERLGLTVSRDYVWTKRETTPAGAPLMALVEHGISRA 224
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
K++ D + L E+K+ ST G RT V +DGYN+ F T + E+K ++ P R+TL +
Sbjct: 225 KFSCDAIAGLVHELKQHSTAGRARTMVVIDGYNALFHPHTRIQTENKVRLTPDRITLVQP 284
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+ ++DW NG VLA+ A DR S LPLY+L + GFE +DPFVPI V ++ E
Sbjct: 285 FREITRNDWTNGVCVLAVDRLALTEDRMASTLPLYLLYREGFEHLDPFVPIRVDGYDETE 344
Query: 302 FHNLLNLYESKKWLQTSE-GRE-EIAFLTKRVPQKMYEFCS 340
FH+ + Y +KW+QT+E G + E+ L+ + P ++ + C+
Sbjct: 345 FHSCIQYYLDRKWIQTTEPGFDLELKALSCQNPYQLMQLCA 385
>gi|198458382|ref|XP_001361017.2| GA17574 [Drosophila pseudoobscura pseudoobscura]
gi|198136324|gb|EAL25593.2| GA17574 [Drosophila pseudoobscura pseudoobscura]
Length = 392
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 217/340 (63%), Gaps = 4/340 (1%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E +++R+ LEL+ Y+K+
Sbjct: 52 EHSALHVAKFYTIPVEQKKQIFTGGGLPKQYEQQIKTFTEPCLMVRSPALELLHYIKN-A 110
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYG++GVGK++ + + L Y N++LLVH+PW W PKE S++ ++E
Sbjct: 111 DLTKPVVRYVLYGDNGVGKTLTMAHVLHYGAINDFLLVHVPWAPNWMKRPKEASNA-SQE 169
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN K L+ +L T++EYVWS RE + A L L+EHGI R+
Sbjct: 170 GMLDLPFDAAAWLVHFKTQNAKLLQQLQLKTNKEYVWSKRESTPAGSSLIELVEHGIARI 229
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYA+D L +E+K+LST G C+ V +DG+N+FF +T ++K +V P R+TLT+
Sbjct: 230 KYATDTTVALISELKQLSTAGQCKIMVAIDGFNAFFHPETRIFSDNKQRVTPDRITLTQP 289
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG +L++ A +S++P Y+L GFE IDPFVPIHV D+E
Sbjct: 290 FLDITNYDWTNGVCILSVDKIAMTEGYMDSYMPRYLLGTQGFEHIDPFVPIHVENYTDKE 349
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
FH+ +N Y + W+ +T +G EE + F++ + P + +
Sbjct: 350 FHSYINYYLDRHWINKTPQGFEEQLKFMSNKNPYTLMQLV 389
>gi|195122218|ref|XP_002005609.1| GI18979 [Drosophila mojavensis]
gi|193910677|gb|EDW09544.1| GI18979 [Drosophila mojavensis]
Length = 401
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/340 (40%), Positives = 214/340 (62%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E+ +++R+ LEL+ Y+K
Sbjct: 60 EHSDVQIGKFYTIPMEEKKQIFSGGGLPKQYEQQIKTFTEACLMVRSPALELLNYIKR-A 118
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYG++GVGK++++ + L Y N++LLVH+PW W PKE ++S ++E
Sbjct: 119 DLSKPVVRYVLYGDNGVGKTLSMAHVLHYGMLNDFLLVHVPWAPNWMKRPKESANSASQE 178
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G +DL DAA WL HF+ QN+K LE +L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 179 GFIDLPFDAAAWLVHFKTQNSKLLERLQLKTSKEYVWSKRESTPAGSSLIELVEHGIARI 238
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L +E+K+L+T G C+ V +DGYN+FF T ++K +V P R+TLT+
Sbjct: 239 KYASETTAALISELKQLATAGQCKVMVAIDGYNAFFHPITRIFSDNKQRVSPDRITLTQP 298
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG +L++ A ES+LP Y+L K GFE +DPFVP+HV ++E
Sbjct: 299 FLDITNYDWTNGVCILSVDKIAMTEGYMESYLPRYLLGKEGFEHLDPFVPVHVGNYTEKE 358
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
F + + Y + W+ +T G EE + F++ P + +
Sbjct: 359 FTSYIKYYLDRHWISKTQPGFEEQLKFMSNMNPYTLMQLV 398
>gi|194882201|ref|XP_001975201.1| GG20695 [Drosophila erecta]
gi|190658388|gb|EDV55601.1| GG20695 [Drosophila erecta]
Length = 390
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 211/340 (62%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFY++P E + IF GG+ + + +Q + F E+ +++RN LEL+ Y+K+
Sbjct: 49 EHSALQVAKFYSIPAEQKKQIFSGGGLPKQYEQQIKTFTEACLMVRNPALELLQYIKN-G 107
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P R+VLYGE+G GK++ + + L Y N++LLVH+PW W PKE S++ +E
Sbjct: 108 DLTKPVVRYVLYGENGTGKTLTMAHVLHYGALNDFLLVHVPWAPNWMKRPKEASNAAGQE 167
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM+DL DAA WL HF+ QN L+ +L T +EYVWS RE + A L L+EHGI R+
Sbjct: 168 GMIDLPFDAAAWLVHFKTQNGPLLQRLQLKTGKEYVWSKRESTPAGSSLIELVEHGIARI 227
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L E+K+LST G C+ V +DG+N+FF T ++K V P RVTLT+
Sbjct: 228 KYASETTAALIAELKQLSTAGQCKVMVAIDGFNAFFHPVTRIFSDNKQLVTPDRVTLTQP 287
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG +L++ A +S++P Y+L K GFE +DPFVPIHV D+E
Sbjct: 288 FLDITNYDWTNGVCILSVDKIAMTEGYMDSYMPRYLLGKEGFEHLDPFVPIHVENYTDKE 347
Query: 302 FHNLLNLYESKKWL-QTSEG-REEIAFLTKRVPQKMYEFC 339
F + ++ Y + W+ +T +G E++ F++ + P + +
Sbjct: 348 FQSYISYYLDRHWINKTPQGFDEQLKFMSNKNPYSLMQLV 387
>gi|195426266|ref|XP_002061261.1| GK20823 [Drosophila willistoni]
gi|194157346|gb|EDW72247.1| GK20823 [Drosophila willistoni]
Length = 389
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 218/340 (64%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS + KFYT+P E + IF GG+ + + +Q + F E+ +++R+ LEL+ Y+++
Sbjct: 48 EHSSLHVAKFYTIPVEQKKKIFGGGGLPKQYEQQIKTFQEACLMVRSPALELLHYIQN-A 106
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P+ R+V+YG +GVGK++ + + L Y N+++LVH+PWV W PKE ++S T+E
Sbjct: 107 DLSKPAVRYVVYGANGVGKTLTMAHVLHYGSLNDFMLVHVPWVPNWMKRPKEAANSSTQE 166
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G +DL DAA WL HF+ QN K L+ L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 167 GFIDLPFDAAAWLVHFKTQNLKLLQQLDLKTSKEYVWSKRESTPAGSTLLELVEHGIARI 226
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L +EIK+LS G C+T V +DG+N+FF +T E+K +V P R+TLT+
Sbjct: 227 KYASETTAALISEIKQLSNAGKCKTMVVIDGFNAFFHPETRIFSENKQRVTPDRITLTQP 286
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG +L++ A SH+P Y+L K GFE +DPF+P+HV ++E
Sbjct: 287 FLDITSYDWTNGICILSVDKIAMTEGYMASHMPRYLLGKEGFEHLDPFIPVHVENYTEKE 346
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVPQKMYEFC 339
F+N ++ Y ++W+ +T G EE + F++ + P ++ +
Sbjct: 347 FYNYISYYLDRRWINKTPPGFEEQLKFMSNKNPYELMQLV 386
>gi|195384417|ref|XP_002050914.1| GJ19940 [Drosophila virilis]
gi|194145711|gb|EDW62107.1| GJ19940 [Drosophila virilis]
Length = 371
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 213/333 (63%), Gaps = 3/333 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+ S+ + KFYT+P E + IF GG+ + + +Q + F E+ +++R+ LEL+ Y+K+
Sbjct: 30 EQSELHVAKFYTIPIEEKKQIFSGGGLPKQYEKQIKTFTEACLMVRSPALELLHYIKN-A 88
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P+ R+VLYG++GVGK++ + + L Y N++LLVH+PW W PKE ++S ++E
Sbjct: 89 DLTKPAVRYVLYGDNGVGKTLTMAHVLHYGALNDFLLVHVPWAPNWMKRPKEAANSASQE 148
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G +DL DAA WL HF+ QN+K L+ +L TS+EYVWS RE + A L L+EHGI R+
Sbjct: 149 GFIDLPFDAAAWLIHFKAQNSKLLQRLQLKTSKEYVWSKRESTPAGATLIELVEHGIARI 208
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L +E+K+L+T G C+ V +DGYN+FF T ++K +V P R+TLT+
Sbjct: 209 KYASETTAALISELKQLATAGQCKIMVAIDGYNAFFHPITRIFSDNKQRVSPDRITLTQP 268
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG VL++ A S++P Y+L K GFE +DPFVP+HV D+E
Sbjct: 269 FLDITSYDWTNGVCVLSVDKIAMTEGYMSSYMPRYLLGKEGFEHLDPFVPVHVGNYTDKE 328
Query: 302 FHNLLNLYESKKWL-QTSEGREE-IAFLTKRVP 332
F + +N Y + W+ +T G EE + FL+ P
Sbjct: 329 FISYINYYLDRHWISKTQPGFEEQLKFLSNMNP 361
>gi|332022870|gb|EGI63142.1| 28S ribosomal protein S29, mitochondrial [Acromyrmex echinatior]
Length = 398
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 210/341 (61%), Gaps = 4/341 (1%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H+ + + YT+P ++ +F+ GG+ R+F +Q F E +ILIR +E++ YL S T+
Sbjct: 59 HNTDHIARLYTVPKNIQQELFQYGGLPRIFIKQVTTFQECAILIRQPAIEVMSYL-SQTD 117
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
RP ++VLYG+ G GKS+ L + L YA NYLLVH+ W WF KEV+ S+ G
Sbjct: 118 HTRPVNKYVLYGKFGTGKSIILSHILHYAFMQNYLLVHVYWGAHWFKDMKEVATSVLSPG 177
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
+DL IDA MWLR F+ QN+K L L +++YVW+ RE + P+ LI GI R+K
Sbjct: 178 CMDLPIDAGMWLRQFKTQNSKLLSQLDLKATKDYVWNQRETTSRGTPILELINFGIDRMK 237
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
YA VVD L EIK ST G C+T V +DG+N+F T ++K VLP +V+L
Sbjct: 238 YACGVVDALIKEIKLASTAGKCKTIVMIDGFNAFTTNHTRIFDDNKMMVLPKQVSLAIPF 297
Query: 243 INLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEF 302
N+ + DW NGAIVL++ +AN +RR+S+LP Y+L K GFE +DPFVPI V + N EF
Sbjct: 298 WNITKDDWCNGAIVLSVDEKAN-KERRDSYLPRYLLGKEGFEHLDPFVPIEVDDYNPAEF 356
Query: 303 HNLLNLYESKKWLQ--TSEGREEIAFLTKRVPQKMYEFCSF 341
+++ Y+ +KW++ T G+ E+ +T + P + + C F
Sbjct: 357 DSMIEYYKDRKWIRNITPSGQRELELVTNKNPLVLMDHCKF 397
>gi|332377015|gb|AEE63647.1| unknown [Dendroctonus ponderosae]
Length = 392
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 223/345 (64%), Gaps = 7/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+KHSK L +FYT+P R+ +F+ GG+ + F + + FNE+ +++R ++++ LKS+
Sbjct: 46 SKHSKDHLAQFYTIPLSDRNVLFQHGGLPKTFQQHIKTFNETCLMVREPAVDIINCLKSI 105
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
++D+P+ RFVLYG++G GKS++L + L YA +N +L+VH+PWV + + K+ S+S T+
Sbjct: 106 -DYDKPAVRFVLYGKNGTGKSISLAHVLHYAFKNKFLIVHVPWVGDFMRHCKDSSNSETR 164
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
EG +DLNI+AA WL HF+ QN + L++P L S++ W+ RE + + + LIEHGI R
Sbjct: 165 EGFIDLNINAAAWLLHFRTQNAELLKNPDLKISRDIQWTKRESTAKDSSILELIEHGINR 224
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+++ASD V++L EIK LS G+C+T V +DG+N FF T E K V P+++TLT
Sbjct: 225 MRFASDCVNILAEEIKLLSNAGICKTLVAIDGFNEFFYPTTKVYTEKKEIVHPNKITLTE 284
Query: 241 SVINLVQSDWNNGAIV-----LALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVP 295
+NL + DW N A++ + + D SH P ++L K GFE +DPF+P++VP
Sbjct: 285 GFLNLTKFDWKNAAVIVTVDEMTVKVHEEGTDPSMSHFPRFLLGKHGFEHLDPFLPVNVP 344
Query: 296 ELNDEEFHNLLNLYESKKWLQTSEGR-EEIAFLTKRVPQKMYEFC 339
+ +E ++++ + ++W++ G+ EE+ FL+ P + ++C
Sbjct: 345 LFSKKEHESIMDYFRERRWVRPYPGQDEELYFLSGGNPFTLLDYC 389
>gi|195027127|ref|XP_001986435.1| GH20533 [Drosophila grimshawi]
gi|193902435|gb|EDW01302.1| GH20533 [Drosophila grimshawi]
Length = 403
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 210/340 (61%), Gaps = 3/340 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS+ + KFYT+P E + IF GG+ + + +Q + F E+ +++R+ LEL+ Y+K+
Sbjct: 62 EHSELHVAKFYTIPVEEKKQIFSGGGLPKQYEQQIKTFTEACLMVRSPALELLQYIKN-A 120
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ P+ R+VLYG++GVGK++ + + L Y N +LLVH+PW W PKE ++S ++E
Sbjct: 121 DLTNPAVRYVLYGDNGVGKTLTMAHVLHYGALNEFLLVHVPWAPNWMKRPKEAANSASQE 180
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G +DL DAA WL HF+ QN K L +L TS+EYVWS RE + A PL L+EHGI R+
Sbjct: 181 GFIDLPFDAAAWLVHFKTQNAKLLGKLQLKTSKEYVWSKRESTPAGAPLMELVEHGIARI 240
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ L E+K+L++ C+ V +DG+N+FF T ++K +V P R+TLT+
Sbjct: 241 KYASETTAALLAELKQLASARQCKIMVAIDGFNAFFHPITRIFSDNKQRVTPERITLTQP 300
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ DW NG VL++ A S++P Y+L K GFE +DPFVP+HV D+E
Sbjct: 301 FLDITNYDWTNGVCVLSVDKIAMTEGYMASYMPRYLLGKDGFEHLDPFVPVHVGNYTDKE 360
Query: 302 FHNLLNLYESKKWLQTSEG--REEIAFLTKRVPQKMYEFC 339
F + +N Y + W+ ++ E++ F++ P + +
Sbjct: 361 FLSYINYYLDRHWISRAQPGFEEQLKFMSNMNPYTLMQLV 400
>gi|307184591|gb|EFN70931.1| 28S ribosomal protein S29, mitochondrial [Camponotus floridanus]
Length = 391
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/341 (39%), Positives = 212/341 (62%), Gaps = 4/341 (1%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H+ + + YT+P +++ IF+ GG+ F +Q F E SI++R +E++ YL + +
Sbjct: 52 HNTDHIARLYTVPIDIQRQIFQNGGLPGKFMKQVTTFQECSIMVRQPAIEIISYLNQV-D 110
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+ RP ++VLYG+ GVGKS+ L + L YA Y+LVHI W WF KEV+ S+ G
Sbjct: 111 YTRPVNKYVLYGKFGVGKSLTLCHILHYAFAQKYVLVHIYWAAHWFKDMKEVATSVLSPG 170
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
+DL IDA +WL+HF+ QN+K L + L S++YVW+ RE + + L+E G+ R+K
Sbjct: 171 CMDLPIDAGLWLKHFKFQNSKLLSELDLKVSKDYVWNQREMTSQGTSILELVEFGMNRIK 230
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
YA V+D L E+K S G C+T V +DG+N+F + T + ++K VLP +V+L
Sbjct: 231 YACGVIDALIKELKLASIAGKCKTMVVIDGFNAFTSSHTRIRNDNKVMVLPKQVSLAIPF 290
Query: 243 INLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEF 302
++ ++DW NGAIV+ + AN DRRESHLP Y+L K GFE +DPF+P+ + + N EF
Sbjct: 291 FDITKNDWCNGAIVVTVDQTAN-KDRRESHLPRYLLGKEGFEHLDPFIPVLIEDYNIAEF 349
Query: 303 HNLLNLYESKKWLQ--TSEGREEIAFLTKRVPQKMYEFCSF 341
+++ Y+ +KW++ TS G+ E+ +T R P + + C F
Sbjct: 350 DSMIEYYKDRKWIRNITSSGQRELELITNRNPFVLMDQCKF 390
>gi|357628104|gb|EHJ77547.1| hypothetical protein KGM_20191 [Danaus plexippus]
Length = 369
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 209/343 (60%), Gaps = 7/343 (2%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS+ + FYT+ + +F GG+ + + +QT+ F E+++++R L+++ +K+ T
Sbjct: 28 QHSENQIGLFYTIDKNLCKQLFGHGGLPKSYMKQTKTFTETTLMVRLPALDVINCIKN-T 86
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWF---AYPKEVSHSL 118
+FD+P+ R+VLYGE G GKS+ + + L YAHE +L+VH+PWV W KE+++S
Sbjct: 87 DFDKPAVRYVLYGEKGAGKSLTMAHLLHYAHEQEFLIVHVPWVSEWLRRVPRHKEMANSP 146
Query: 119 TKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGI 178
TKEG VDL +DAA WL HF+ QN L++P + S Y WS RE + PL L+E GI
Sbjct: 147 TKEGFVDLPLDAAAWLLHFKTQNQTLLKNPDV--SLNYTWSKRESTSQGAPLLELVELGI 204
Query: 179 TRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTL 238
RVKYA DV+D L EIK LS C+TFV +DG+NSFF T + K V P V+L
Sbjct: 205 ARVKYACDVIDALVHEIKLLSNNKCCKTFVAIDGFNSFFYPLTRLRTPTKRTVSPEEVSL 264
Query: 239 TRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELN 298
T S + L ++DW NG +V+ A D +ES+LP Y+L K GFE +DPFVPI V +
Sbjct: 265 TTSFLTLTKNDWTNGVVVVTADQLAVPEDHQESYLPKYLLYKKGFEHLDPFVPIEVGRYS 324
Query: 299 DEEFHNLLNLYESKKWLQT-SEGREEIAFLTKRVPQKMYEFCS 340
+ EF + Y + WL+ SE +E+ F + P K E C+
Sbjct: 325 EREFLTCASYYRDRLWLRGPSELEDELKFTSACNPYKFMELCA 367
>gi|321450211|gb|EFX62319.1| hypothetical protein DAPPUDRAFT_337113 [Daphnia pulex]
gi|321463932|gb|EFX74944.1| hypothetical protein DAPPUDRAFT_199653 [Daphnia pulex]
Length = 389
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 202/336 (60%), Gaps = 6/336 (1%)
Query: 10 KFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPR 69
+FY++ + V+ F GG+ + + ++ N I++R +EL+ YL TNFD P R
Sbjct: 53 RFYSISEPVKKQFFAGGGLPKEYQSLSETLNGLCIMVRKPAIELIHYLNK-TNFDAPVLR 111
Query: 70 FVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNID 129
+VLYG+ GVGKS++L + + Y ++LVH+PWV +WF Y K + S D I+
Sbjct: 112 YVLYGKTGVGKSLSLAHIVHYGSSAGFVLVHVPWVPKWFQYVKVATPSSVHANKYDQPIE 171
Query: 130 AAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVD 189
A WL+HF QN L+ L TS Y WS RE + PL+ LI+ G+ R KYA+ +
Sbjct: 172 AVEWLKHFSTQNGHLLDKLELKTSNTYTWSKREVTAEGSPLSELIDLGLNRAKYATGCIV 231
Query: 190 VLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSD 249
L E+KK ++ CR V +DG+NSFF+ K+N EDKS VLPS LT ++++L ++D
Sbjct: 232 ALLDELKKAASSKQCRVLVVIDGFNSFFSRKSNVIREDKSMVLPSDFLLTDALLSLTRND 291
Query: 250 WNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLY 309
WNNGA+V+++ P A+ P+ RES LP Y+L K GFE +DPFVPI V ND+EF + ++ Y
Sbjct: 292 WNNGAVVVSVDPSAHPPELRESPLPRYLLGKTGFEHLDPFVPIEVQNYNDKEFRSQIDYY 351
Query: 310 ESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
+ WLQ T GR E++F + + P + +
Sbjct: 352 IERNWLQQPKARTDNGRAELSFTSGKHPYSLMRLVA 387
>gi|91079626|ref|XP_967654.1| PREDICTED: similar to mitochondrial ribosomal protein S29 CG3633-PA
[Tribolium castaneum]
gi|270004472|gb|EFA00920.1| hypothetical protein TcasGA2_TC003826 [Tribolium castaneum]
Length = 386
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 212/339 (62%), Gaps = 3/339 (0%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
KH+ + ++Y +P ++ GG+ + + QT+ FNE+ +++R ++++ LK +
Sbjct: 47 KHTLDHVGQYYRVPQN-ECKVYLYGGLPKSYEIQTKTFNETCLMVRKPSVDIINCLKGL- 104
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
++ +P+ RFVL+G+ G GKS+ + + L YA + +LLVH+PW+ W PKE+S S T+E
Sbjct: 105 DYTKPAVRFVLFGKKGSGKSLTMAHVLHYAQKAGFLLVHVPWLGNWMRNPKELSSSETRE 164
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G DLN+DAA WL HF+ QN L P L T++E+VWS RE + + L LI+HGI R+
Sbjct: 165 GFYDLNLDAAAWLVHFKSQNEHLLSAPELKTTREHVWSKRESTPKDSSLLELIDHGINRL 224
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
KYAS+ V L E+K+L+ G C+T V +DG+N+FF KT E K V P+++TLT +
Sbjct: 225 KYASECVLALAEELKQLTKAGNCKTLVAIDGFNAFFYPKTRVFKEKKEVVPPNKITLTEA 284
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
++L + DWNN AIV+ + A + +SH P Y+L K GFE +DPFVP+ V + +E
Sbjct: 285 FLSLTKFDWNNAAIVVTVDEIAIAEEDHKSHFPRYLLGKEGFEHLDPFVPVFVDAYSPKE 344
Query: 302 FHNLLNLYESKKWLQT-SEGREEIAFLTKRVPQKMYEFC 339
+ ++ Y +KW++ + EE+A L+ P K+ + C
Sbjct: 345 LTSCMDYYRERKWVRYFPQQDEELASLSAYNPYKLMKLC 383
>gi|347964696|ref|XP_316867.5| AGAP000890-PA [Anopheles gambiae str. PEST]
gi|333469466|gb|EAA12146.5| AGAP000890-PA [Anopheles gambiae str. PEST]
Length = 407
Score = 270 bits (689), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 210/356 (58%), Gaps = 20/356 (5%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H++ L ++YT+P +VR IF GG+ + F Q + FNE S+++R +E++ YL+ T+
Sbjct: 52 HTRATLGRYYTVPGDVRKKIFAHGGLPKSFERQIKTFNECSLMVRRPAVEIMEYLQR-TD 110
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
F RP RFVL+GE GVGKS+ L + L Y + Y+L+H+PWV W KE+++S + EG
Sbjct: 111 FARPVNRFVLHGEDGVGKSLVLAHLLHYGFQQQYVLIHVPWVPNWMKRAKEIANSASHEG 170
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
+DL +D A WL HF+ QN ++ LT S+EYVW+ RE + A PL L+EHGI R K
Sbjct: 171 SIDLPLDGAAWLVHFKSQNGPLIKSLGLTVSREYVWTKRETTPAGAPLMELVEHGINRAK 230
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
++ D + L E+K+ ++ G R V +DGYN+FF T E K+++ P ++TLT+
Sbjct: 231 FSCDTIAALVEELKQHASAGRARAMVVIDGYNAFFQPHTRLLTEAKARITPDQITLTKPF 290
Query: 243 INLVQSDWNNGAIVLAL----------------SPRANLPDRRESHLPLYMLKKAGFESI 286
+++ ++DW NG V+ + S A +E L L + + FE +
Sbjct: 291 LSITRNDWTNGVCVVTVDQMVKEFKDTAAGRQSSAVAGPAQVQEPSLAL-LESRECFEHL 349
Query: 287 DPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEG--REEIAFLTKRVPQKMYEFCS 340
DPFVP+ V +D E+++ + Y +KW+QT+E EE+ L+ + P ++ + C+
Sbjct: 350 DPFVPVSVVGYDDAEYYSCIQYYLERKWIQTNEPGFEEELKLLSCQNPYQLMQLCA 405
>gi|156537978|ref|XP_001608186.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Nasonia
vitripennis]
Length = 386
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 216/341 (63%), Gaps = 5/341 (1%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+KHS L+++YT+P + IF I + +Q + F E +LIR +E++ L S
Sbjct: 46 SKHSAVHLHRYYTIPYNEINTIFA-QTIPGEYIKQNKTFQEMCLLIRKPAIEIINCL-SQ 103
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T++ +P ++VLYGE G GK+ L++ + Y + ++V++ W W+ +P+EV++S T+
Sbjct: 104 TDYTKPVNKYVLYGEDGCGKTSTLLHLIHYGYVTKKIIVNVQWAPMWYRFPREVANSTTR 163
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
EG VDL IDAA WL +F+ QN L L S Y WS +E S PL LI+ GI R
Sbjct: 164 EGFVDLPIDAAAWLLNFKNQNRLILNQVDLKLSNAYEWSSQESSLKGSPLIELIDFGIQR 223
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
VKYASD+V L +E+K+ S G C+ V +D YN+FFA +TN K + K KV S+VTLT+
Sbjct: 224 VKYASDIVIALMSELKQASIAGKCKIMVAIDCYNAFFANETNVKNDAKQKVPASKVTLTQ 283
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
+ +++ +SDW NG I+LA+ + + D R+S+ P Y+L+K GF+ +DPF+PI V + +
Sbjct: 284 AFLDITKSDWCNGEIILAVD-QFSTKDVRDSYFPRYLLRKEGFDHLDPFLPIAVENYSTD 342
Query: 301 EFHNLLNLYESKKWLQ--TSEGREEIAFLTKRVPQKMYEFC 339
EF ++ Y+++KW++ + EG++E+ ++ + P K+ E+C
Sbjct: 343 EFDTVIEYYKNRKWIRKLSPEGQKELELVSGKNPYKLMEYC 383
>gi|307203284|gb|EFN82439.1| 28S ribosomal protein S29, mitochondrial [Harpegnathos saltator]
Length = 352
Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 208/341 (60%), Gaps = 8/341 (2%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H+K+ + KFY +P + AI + G + F Q F E ++++R +E++ YL + +
Sbjct: 17 HNKEHIGKFYKIP--IEQAI-QCNGFPKRFVRQAVTFQEYAVMVREPAVEIMSYLNQI-D 72
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+ RP +++LYG+ G GKS+ L + L YA Y+ VHIPWV WF KEV++S G
Sbjct: 73 YTRPVNKYILYGKIGTGKSITLCHVLHYAFTQKYITVHIPWVPHWFRNMKEVANSALLPG 132
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
+DL IDA +WL+HF+ QN L L S +Y W+ RE + + L++ G+ R+K
Sbjct: 133 YLDLPIDAGLWLKHFKVQNINLLTQLDLKVSTDYTWNQREMTPQGTSILELLDFGLNRMK 192
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
YA V+DVL E+K ST G C+T V +DG+N+F +KT + ++K+ V P++V+LT S
Sbjct: 193 YACGVIDVLIKELKLASTAGKCKTIVVIDGFNAFTMDKTYIRDDNKALVPPNKVSLTISF 252
Query: 243 INLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEF 302
+N+ +SDW NGA+VL + AN S LP Y+L K GFE +DPF+PI V + N EF
Sbjct: 253 LNITKSDWCNGAVVLTVDKHAN--QSEGSDLPRYLLGKEGFEHLDPFIPILVDDYNTAEF 310
Query: 303 HNLLNLYESKKWLQ--TSEGREEIAFLTKRVPQKMYEFCSF 341
+++ Y+ +KW++ T EG++E+ +T R P + C+F
Sbjct: 311 DSMIEYYKERKWIRNITPEGQKELELITNRNPLTLMLQCNF 351
>gi|383853672|ref|XP_003702346.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Megachile
rotundata]
Length = 384
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 197/340 (57%), Gaps = 8/340 (2%)
Query: 3 HSKQDLYKFYTLPDEVRSAI-FELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
H+++ L + YT+P E+ + EL TR ++ IF E I++R LEL+ YL+ T
Sbjct: 47 HNERHLGRIYTVPAEITDLMKAELPKETR---KRIDIFREFGIVVRKPALELISYLER-T 102
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
++ + R+VLYG G GK+ L++ + Y ++++H+PW+ W+ +P EV S
Sbjct: 103 DYTKAVNRYVLYGRDGTGKTTTLIHLVHYGLVKQFVVMHLPWISTWYRFPLEVQESPLIP 162
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G +DL +A WL++F N L L S++YVW+ RE ++A PL LI+ G R+
Sbjct: 163 GQLDLPQEAVSWLKYFSTLNKLALSQYDLKVSKDYVWTQRESTKAGEPLLNLIQFGTERI 222
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
K+A VV L E+K S G C+T + +DG+N+FF T + E V P +++LT
Sbjct: 223 KFACGVVSALLEELKAASIAGKCKTLIVIDGFNAFFTGPTMIRDEKYKYVPPQKISLTAP 282
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
N V DW NGA++++L RA+ D+RES P Y+L K GFE +DPF+PIH +E
Sbjct: 283 FYNSVNYDWCNGAVLISLDIRASR-DKRESFYPKYLLGKEGFEYLDPFLPIHTENYTSDE 341
Query: 302 FHNLLNLYESKKWLQT--SEGREEIAFLTKRVPQKMYEFC 339
+ N+L YE +KW++ +G+ EI LT + P ++E C
Sbjct: 342 YKNILEYYEDRKWIRKFGPQGQREIELLTNKNPMDIWERC 381
>gi|392880064|gb|AFM88864.1| 28S ribosomal protein S29, mitochondrial-like isoform 1
[Callorhinchus milii]
Length = 398
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 203/344 (59%), Gaps = 14/344 (4%)
Query: 6 QDLYK--FYTLP-DEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
Q L+K YT+P +++SA G+ R F +Q + F E+ +++R LEL+ YLK+ TN
Sbjct: 60 QQLHKGLHYTIPPSDLKSAFPH--GLPRRFQQQVKTFGEACLMVRQPALELISYLKA-TN 116
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
F P+ R+++YG+ G GK++ L A+ Y + +L++H+P W KE+ S +
Sbjct: 117 FSYPAIRYLIYGQRGCGKTLTLCNAVHYCAKQGWLILHVPDAYIWVKSHKELLQSSYNQA 176
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D ++A++WL++F+ N ++L++ + T Q+Y+WS RE +E PL ++E G+TRVK
Sbjct: 177 RFDQPLEASVWLKNFKITNERFLKE--IKTRQKYIWSKREATEEGRPLGEVVEQGLTRVK 234
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
ASD V VLF E+ + R V +DG N+ + T K ED+S++LP +TL ++
Sbjct: 235 SASDAVGVLFKELTGQCSPDTYRLLVAIDGANALWG-PTAMKKEDRSQILPHELTLMHNL 293
Query: 243 INLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEF 302
LV +DW GA+V+ L+ L SHLP +L+K GF+++DPFVPI V + N +EF
Sbjct: 294 RKLVNNDWCAGAVVMTLTKTGALGSSHLSHLPHDLLRKEGFDTLDPFVPIEVGDYNGKEF 353
Query: 303 HNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
+ Y +KW+Q T EG++E+ FL P M CSF
Sbjct: 354 ESCYQYYVERKWIQHEKAHTEEGKQELLFLCNYNPGMMDRVCSF 397
>gi|392877706|gb|AFM87685.1| 28S ribosomal protein S29, mitochondrial-like isoform 1
[Callorhinchus milii]
Length = 398
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 203/344 (59%), Gaps = 14/344 (4%)
Query: 6 QDLYK--FYTLP-DEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
Q L+K YT+P +++SA G+ R F +Q + F E+ +++R LEL+ YLK+ TN
Sbjct: 60 QQLHKGLHYTIPPSDLKSAFPH--GLPRRFQQQVKTFGEACLMVRQPALELISYLKA-TN 116
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
F P+ R+++YG+ G GK++ L A+ Y + +L++H+P W KE+ S +
Sbjct: 117 FSYPAIRYLIYGQRGCGKTLTLCNAVHYCAKQGWLILHVPDAYIWVKSHKELLQSSYNQA 176
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D ++A++WL++F+ N ++L++ + T Q+Y+WS RE +E PL ++E G+TRVK
Sbjct: 177 RFDQPLEASVWLKNFKITNERFLKE--IKTRQKYIWSKREATEEGRPLGEVVEQGLTRVK 234
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
ASD V VLF E+ + R V +DG N+ + T K ED+S++LP +TL ++
Sbjct: 235 SASDAVGVLFKELTGQCSPDTYRLLVAIDGANALWG-PTTMKKEDRSQILPHELTLMHNL 293
Query: 243 INLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEF 302
LV +DW GA+V+ L+ L SHLP +L+K F+++DPFVPI V + N++EF
Sbjct: 294 KKLVNNDWCAGAVVMTLTKTGALGSSHLSHLPHDLLRKEDFDTLDPFVPIEVGDYNEKEF 353
Query: 303 HNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
+ Y +KW+Q T EG++E+ FL P M CSF
Sbjct: 354 ESCYQYYVERKWIQHEKAHTEEGKQELLFLCNYNPGMMDRVCSF 397
>gi|66504543|ref|XP_394332.2| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 1 [Apis
mellifera]
Length = 383
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 198/340 (58%), Gaps = 6/340 (1%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+H++ L K YT+ ++ S + + +T +QT IF E IL+R +EL+ YL+ T
Sbjct: 45 EHNENCLNKIYTISSDITSLLMK--DMTIELKKQTTIFRELGILVRKPAIELISYLEQ-T 101
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
++ + ++VLYG+ GVGK+ L++ + Y +++++++PWV WF Y +EVS S
Sbjct: 102 DYTKSINKYVLYGKEGVGKTTTLLHLIHYGLMKHFIIIYLPWVRNWFRYAREVSESPLIP 161
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
+DL AA WL + + N L L T++EY WS RE ++ L+ LIE GI R
Sbjct: 162 DKLDLPQVAAKWLEYLKYLNEVSLSQYNLKTTKEYTWSQREVTKCGETLSNLIEFGIKRN 221
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
K+A V++ L E+K ST G C+T V +DG+N+F + T+ E+ + P ++++T +
Sbjct: 222 KFACGVINALLDELKLASTAGKCKTLVFIDGFNAFTSTITHVCDENNKYMPPEKISITSA 281
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
N+V DW NGA +L + RAN DRR+S P Y+L K GFE +DPF+PI V + EE
Sbjct: 282 FYNIVNYDWCNGAAILTVDKRAN-KDRRDSDYPKYLLGKKGFEHLDPFLPIQVENYSKEE 340
Query: 302 FHNLLNLYESKKWLQTSE--GREEIAFLTKRVPQKMYEFC 339
F +L Y +KW++ G +E+ L+ + P ++ C
Sbjct: 341 FTTILEYYTDRKWIRNISPLGMKELELLSNKHPVTLWRLC 380
>gi|242015193|ref|XP_002428258.1| mitochondrial 28S ribosomal protein S29, putative [Pediculus
humanus corporis]
gi|212512819|gb|EEB15520.1| mitochondrial 28S ribosomal protein S29, putative [Pediculus
humanus corporis]
Length = 368
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 196/340 (57%), Gaps = 3/340 (0%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+ HS++D+ YTLP+ + + G+ + ++ + FNE+ ILIR LE++ YLK+
Sbjct: 30 SNHSQKDVGLIYTLPNNLALDVLFQKGLPSQYRDECETFNETPILIRKPALEIINYLKN- 88
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF+ P ++VLYG+ G GK+ L + + YA N+YL+VH+P + W+ E+ S+
Sbjct: 89 TNFNSPINKYVLYGKKGGGKAFTLYHIIHYASLNDYLIVHVPRIQEWYFNKVEIEKSINS 148
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ DL I + WL+HF+ QN ++ L + EY W+ +E + L L+ GI R
Sbjct: 149 NCVFDLPIRGSHWLKHFKNQNENIIKKLDLKLNNEYKWNIQEINYKGESLLNLVNFGINR 208
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
KY+ +V++ +F E K+LS +T V ++GYN F + C K + P + T
Sbjct: 209 TKYSCEVINAVFEEAKQLSKNNCVKTLVAMEGYNLLFNAEP-CYKRRKGQWKPEDINCTE 267
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
+ N+ ++DW+NGA++L + A + +S+LP+ +LK G E + PF+PI VP LND+
Sbjct: 268 AFKNIAKADWHNGAVILTCTSLAR-DNTLKSYLPVNLLKTNGIEFLHPFIPIEVPPLNDK 326
Query: 301 EFHNLLNLYESKKWLQTSEGREEIAFLTKRVPQKMYEFCS 340
E ++L Y SKKWL TS+G EE+ FL + + CS
Sbjct: 327 EMMSVLEYYRSKKWLLTSQGDEELKFLCAGNYYTLRKLCS 366
>gi|334322619|ref|XP_001374287.2| PREDICTED: 28S ribosomal protein S29, mitochondrial [Monodelphis
domestica]
Length = 405
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 202/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q L + Y++P E I G+ F Q + FNE+ +++R LEL+ YLK+
Sbjct: 64 AKHGEQHLCQHYSIPLEELKTILP-HGLPPHFGMQVKTFNEACLMVRKPGLELLNYLKN- 121
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VL+GE G GK++ L + + + + ++L++HIP RW +++ S+
Sbjct: 122 TNFANPAIRYVLFGEKGTGKTLTLCHVVHFCAKQDWLIMHIPDAHRWMKNCRDLLPSVYN 181
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D + A+ WL++F+ N ++L ++ Q+Y+W+ RE E PL ++E G+TR
Sbjct: 182 KERYDQPLQASTWLKNFKTSNERFLN--QIKIQQKYIWNKRESIEEGRPLGEVVEQGLTR 239
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
VK ASD V ++ E+K+ S+ G R V VDG N+ + KT K EDKS + P +TL
Sbjct: 240 VKSASDAVGIVMKELKRQSSLGSFRLLVAVDGVNALWG-KTTLKKEDKSLIAPEELTLVH 298
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V +DW+ GAIV++LS +L R ++LP +L K GF+ +DPF+PI V +
Sbjct: 299 NMKKMVTNDWHGGAIVVSLSQTGSLFKPRAAYLPQDLLGKEGFDDLDPFIPIQVHNYTPK 358
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y +WLQ T EG++E+ FL+ P ++ C++
Sbjct: 359 EFESCFQYYLENRWLQHKKAHTEEGKKELLFLSNSNPWQLERLCAY 404
>gi|326933480|ref|XP_003212831.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Meleagris
gallopavo]
Length = 397
Score = 233 bits (595), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 195/340 (57%), Gaps = 10/340 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+HS+Q Y++P E A+ G+ F +Q + F E+ I++R LEL YLK+
Sbjct: 56 ARHSEQHEGHHYSIPLEEVKAVLP-HGLPHRFQQQIKTFKEACIMVRKPALELFTYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
+NF P R+V+YGE G GK+M L + + + +L++HIP W KE+ S
Sbjct: 114 SNFAHPVVRYVIYGERGTGKTMTLCHVVHFCARQGWLVLHIPDAHLWVKNCKELMQSSYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ +D + A+ WLR+F+ N +L++ + T Q+YVWS R+ +E PL ++E G+TR
Sbjct: 174 KERLDQPLQASFWLRNFRTTNESFLKE--IKTQQKYVWSKRDSTEQGRPLGEVVEQGLTR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
VK ASDVV V+ EIK+ G R V VDG N+ + +T K EDKS V P +TL
Sbjct: 232 VKNASDVVGVVLKEIKQQCCLGSFRVLVAVDGVNALWG-RTTLKKEDKSPVSPEELTLVY 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++ ++WN GA+V LS +L +HLP +L K GF+++DPFVPI VP +
Sbjct: 291 NLRKMMMNNWNGGAVVTTLSQTGSLFKPSSAHLPHELLGKEGFDALDPFVPILVPNYTER 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKM 335
EF + Y +WLQ T +G+EE+ FL+ R P ++
Sbjct: 351 EFESCYRYYLHCRWLQHDKARTEDGKEELRFLSGRNPWQL 390
>gi|350427332|ref|XP_003494724.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Bombus
impatiens]
Length = 386
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 202/340 (59%), Gaps = 6/340 (1%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+H L + YT+P ++ +++ + ++ +Q QIF E IL+R +E++ YL+ T
Sbjct: 47 EHDASCLNRIYTVPSDITTSL--MADMSIELKKQVQIFRELGILVRQPAVEVISYLE-QT 103
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
++ +P ++VLYG+ G GK+ L++ + Y + ++H+PWV WF Y ++ + S +
Sbjct: 104 DYTKPINKYVLYGKSGAGKTTILLHLVHYGLTKCFFVLHLPWVRNWFRYARDTTASPLES 163
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
+DL A WL++ ++ N L L T++EY WS RE ++ L+ LIE GI R
Sbjct: 164 DKLDLPESATKWLKYIKQLNNVSLSQLDLKTTKEYTWSQREVTKPGDSLSNLIEFGIQRT 223
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
K+A V++ L E+K ST G C+T V +DG+N+ ++ T+ E++ V P ++++T +
Sbjct: 224 KFACGVINALVDELKIASTAGKCKTLVVIDGFNALTSDITHVCDENRVYVPPDKISITSA 283
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
++ V +W NGA VL + RAN D+R+S P Y+L K GFE +DPF+PI V E + EE
Sbjct: 284 FLSSVNYNWCNGAAVLTVDKRAN-RDKRDSDYPTYLLGKKGFEHLDPFLPICVDEYSVEE 342
Query: 302 FHNLLNLYESKKWLQ--TSEGREEIAFLTKRVPQKMYEFC 339
+L Y+ +KW++ + +G++E+ L+ + P ++ C
Sbjct: 343 LDTILKYYKDRKWIRNVSPQGQKELELLSNKNPFTLWTLC 382
>gi|327286124|ref|XP_003227781.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Anolis
carolinensis]
Length = 370
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 193/335 (57%), Gaps = 10/335 (2%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H+++ + ++Y+LP + IF G R F Q + FNE+ ++R +EL+ YLK TN
Sbjct: 31 HTEEHVGQYYSLPRQEVEEIFPHGLPAR-FKLQRKTFNETCFMVREPAIELISYLKR-TN 88
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
F P+ R+V+YGE GK+M L +A+ Y N+ ++HIP W K++ S +
Sbjct: 89 FSHPAVRYVIYGEKSTGKTMTLCHAIHYCARQNWFILHIPDAHLWVKNCKQLLPSTYNKD 148
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D ++A+ WL++F+ N ++L++ + T Q YVWS RE + PL +I+ G+TRVK
Sbjct: 149 RFDQPLEASTWLKNFKTTNERFLKE--IKTQQSYVWSKRESTAEGSPLGEVIDQGLTRVK 206
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
ASD V V+ E+K+ +G R V VDG NS + + T K +DKS+V +TL ++
Sbjct: 207 NASDAVGVVLKELKQQCPQGTFRLLVAVDGVNSLWGQ-TTVKKQDKSEVAVEELTLIHNL 265
Query: 243 INLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEF 302
+V +DW GAIV LS + R+++LP +L K GF+++DPFVPI V D EF
Sbjct: 266 RKMVANDWTGGAIVTTLSQTGAIYKPRKAYLPHELLGKKGFDALDPFVPIQVHNYTDREF 325
Query: 303 HNLLNLYESKKWLQ-----TSEGREEIAFLTKRVP 332
+ Y +KWLQ T+EGR E+ FLT P
Sbjct: 326 ESCYQYYLEQKWLQHEKASTNEGRLELRFLTGCNP 360
>gi|340710541|ref|XP_003393846.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Bombus
terrestris]
Length = 386
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 199/340 (58%), Gaps = 6/340 (1%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+H + L YT+P ++ + + + T +Q QIF E IL+R +E++ YL+ T
Sbjct: 47 EHDENCLNHIYTVPSDITALL--MANTTIELRKQVQIFRELGILVRQPAIEMISYLEQ-T 103
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
++ +P ++VLYG+ G GK+ L++ + Y + ++H+PWV WF Y ++ S +
Sbjct: 104 DYTKPINKYVLYGKFGAGKTTILLHLIHYGLTKCFFVLHLPWVQNWFRYARDTIASPLEP 163
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
+DL A WL++ + N L L T++EY WS RE ++ L+ LIE GI R
Sbjct: 164 DKLDLPESAVKWLKYIKHLNNVSLSQLDLKTTKEYTWSQREVTKVGDSLSNLIEFGIQRT 223
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
K+A V++ L E+K ST G CRT V +DG+N+ ++ T+ + E++ V P ++++T +
Sbjct: 224 KFACGVINALVDELKIASTAGKCRTLVVIDGFNALTSDITHVRDENRVYVPPDKISITSA 283
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++V +W NGA VL + RAN D+R+S P Y+L K GFE +DPF+PI V + + EE
Sbjct: 284 FLSIVDYNWCNGAAVLTVDKRAN-RDKRDSDYPTYLLGKKGFEHLDPFLPICVDDYSVEE 342
Query: 302 FHNLLNLYESKKWLQ--TSEGREEIAFLTKRVPQKMYEFC 339
+L Y+ + W++ + +G++E+ L+ + P ++ C
Sbjct: 343 LGTILKYYKDRNWIRNVSPQGQKELELLSNKNPFTLWTLC 382
>gi|124053579|sp|P82922.3|RT29_BOVIN RecName: Full=28S ribosomal protein S29, mitochondrial;
Short=MRP-S29; Short=S29mt; AltName:
Full=Death-associated protein 3; Short=DAP-3; Flags:
Precursor
gi|296489653|tpg|DAA31766.1| TPA: 28S ribosomal protein S29, mitochondrial [Bos taurus]
Length = 397
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 203/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + + Y + + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 56 AKHGEQHVGQHYNISIQELKTVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 114 TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRDLLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A++WL++F+ N ++L ++ +YVW+ RE +E PLA ++E GI R
Sbjct: 174 KQRFDQPLEASIWLKNFKTANERFLS--QIKVQDKYVWNKRESTEKGSPLAEVVEQGIMR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ GV R V VDG N+ + +T K EDKS + P + L
Sbjct: 232 VRNATDAVGIVLKELKRQSSLGVFRLLVAVDGVNALWG-RTTLKREDKSPITPEELALIY 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW GAIVL +S +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 291 NLRKMVKNDWQGGAIVLTVSQTGSLFKPRKAYLPQELLGKEGFDTLDPFIPILVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y WLQ T EG++E+ FL+ R P + C++
Sbjct: 351 EFEGCIQYYLENNWLQHEKAHTEEGKKELLFLSNRNPGLLERLCAY 396
>gi|440903624|gb|ELR54261.1| 28S ribosomal protein S29, mitochondrial, partial [Bos grunniens
mutus]
Length = 424
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 203/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + + Y + + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 83 AKHGEQHVGQHYNISIQELKTVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 140
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 141 TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRDLLQSTYN 200
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A++WL++F+ N ++L ++ +YVW+ RE +E PLA ++E GI R
Sbjct: 201 KQRFDQPLEASIWLKNFKTANERFLS--QIKVQDKYVWNKRESTEKGSPLAEVVEQGIMR 258
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ GV R V VDG N+ + +T K EDKS + P + L
Sbjct: 259 VRNATDAVGIVLKELKRQSSLGVFRLLVAVDGVNALWG-RTTLKREDKSPITPEELALIY 317
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW GAIVL +S +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 318 NLRKMVKNDWQGGAIVLTVSQTGSLFKPRKAYLPQELLGKEGFDTLDPFIPILVSNYNPK 377
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y WLQ T EG++E+ FL+ R P + C++
Sbjct: 378 EFEGCIQYYLENNWLQHEKAHTEEGKKELLFLSNRNPGLLERLCAY 423
>gi|26328099|dbj|BAC27790.1| unnamed protein product [Mus musculus]
Length = 396
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 204/345 (59%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 55 AKHGEQHEGQHYSIPLQDLKTVFPHGLPPR-YMMQVKTFGEACLMVRKPALELLGYLKN- 112
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + N++L++HIP W +E+ S
Sbjct: 113 TNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCARNDWLILHIPDAHLWVKNCRELLQSTHN 172
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 173 KQRFDQPLEASTWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTR 230
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V V+ E+K S G+ V VDG N+ + +T K ED++ + P ++L
Sbjct: 231 VRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWG-RTTLKKEDRTLIAPEELSLVH 289
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL+LS +L R ++LP +L K GF +++PF+PI +P N +
Sbjct: 290 NLRKMVKNDWHGGAIVLSLSQTGSLFKSRTAYLPHELLGKEGFNALEPFLPILIPNYNPK 349
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P+++ C+
Sbjct: 350 EFESSFQYYLENNWLQHEKASTEEGRKELRFLSNCNPEQLERLCA 394
>gi|349603120|gb|AEP99050.1| 28S ribosomal protein S29, mitochondrial-like protein [Equus
caballus]
Length = 397
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 205/346 (59%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y +P + A+F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 56 AKHGEQHEGQHYNIPLQDLKAVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W + + S
Sbjct: 114 TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRNLLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ +D ++A++WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 174 KQRLDQPLEASIWLKNFKTANERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 232 VRNATDAVGIVLKELKRQSSSGIFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELALIY 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL LS ++ R++ LP +L K GF+++DPF+PI V N +
Sbjct: 291 NLRKMVKNDWHGGAIVLTLSQTGSVFKPRKAFLPQELLGKEGFDTLDPFIPILVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T +G++E+ FL+ P ++ C++
Sbjct: 351 EFESCIQYYLENNWLQHEKAHTEDGKKELLFLSNTNPGQLERLCAY 396
>gi|395532133|ref|XP_003768126.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 1
[Sarcophilus harrisii]
Length = 398
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 200/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q L + Y +P E IF G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 57 AKHEEQHLSQHYNIPLEEVKTIFPHGFPPR-FGMQVKTFNEACLMVREPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK++ L +A+ + + ++L++H+P W ++ S
Sbjct: 115 TNFANPAIRYVLYGEKGTGKTLTLCHAVHFCAKQDWLILHVPDAHSWMKNCPDLLQSTYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D + A+ WL++F+ N ++L ++ Q+Y+W+ R+ E PL ++E G+TR
Sbjct: 175 KERYDQPVKASTWLKNFKTSNEQFLN--QIKIQQKYIWNKRDSIEEGRPLGEVVEQGLTR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ ASD V ++ E+K+ S+ G R V VDG N+ + KT K EDKS V +TL
Sbjct: 233 VRNASDAVGIVMKELKRQSSSGSFRLLVAVDGVNALWG-KTTLKKEDKSLVAAEELTLVH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++ +DW+ GAIV++LS +L R ++LP +L K GF+ +DPFVPI V +
Sbjct: 292 NMKKMLSNDWHGGAIVMSLSQTGSLFKPRVAYLPQDLLGKEGFDDLDPFVPIQVYNYTPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y +WLQ T EG++E+ FL+ P ++ C++
Sbjct: 352 EFESCIQYYLENRWLQHEKAHTEEGKKELLFLSNSNPWQLERLCAY 397
>gi|194210699|ref|XP_001499176.2| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 1
[Equus caballus]
Length = 412
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 205/346 (59%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y +P + A+F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 71 AKHGEQHEGQHYNIPLQDLKAVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 128
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W + + S
Sbjct: 129 TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRNLLQSTYN 188
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ +D ++A++WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 189 KQRLDQPLEASIWLKNFKTANERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 246
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 247 VRNATDAVGIVLKELKRQSSSGIFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELALIY 305
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL LS ++ R++ LP +L K GF+++DPF+PI V N +
Sbjct: 306 NLRKMVKNDWHGGAIVLTLSQTGSVFKPRKAFLPQELLGKEGFDTLDPFIPILVSNYNPK 365
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T +G++E+ FL+ P ++ C++
Sbjct: 366 EFESCIQYYLENNWLQHEKAHTEDGKKELLFLSNTNPGQLERLCAY 411
>gi|165377099|ref|NP_001106765.1| 28S ribosomal protein S29, mitochondrial [Bos taurus]
Length = 397
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 203/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + + Y + + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 56 AKHGEQHVGQHYNISIQELKTVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 114 TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRDLLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A++WL++F+ N ++L ++ +Y+W+ RE +E PLA ++E GI R
Sbjct: 174 KQRFDQPLEASIWLKNFKTANERFLS--QIKVQDKYIWNKRESTEKGSPLAEVVEQGIMR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ GV R V VDG N+ + +T K EDKS + P + L
Sbjct: 232 VRNATDAVGIVLKELKRQSSLGVFRLLVAVDGVNALWG-RTTLKREDKSPITPEELALIY 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW GAIVL +S +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 291 NLRKMVKNDWQGGAIVLTVSQTGSLFKPRKAYLPQELLGKEGFDTLDPFIPILVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y WLQ T EG++E+ FL+ R P + C++
Sbjct: 351 EFEGCIQYYLENNWLQHEKAHTEEGKKELLFLSNRNPGLLERLCAY 396
>gi|151556034|gb|AAI49932.1| DAP3 protein [Bos taurus]
Length = 424
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 203/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + + Y + + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 83 AKHGEQHVGQHYNISIQELKTVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 140
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 141 TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRDLLQSTYN 200
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A++WL++F+ N ++L ++ +Y+W+ RE +E PLA ++E GI R
Sbjct: 201 KQRFDQPLEASIWLKNFKTANERFLS--QIKVQDKYIWNKRESTEKGSPLAEVVEQGIMR 258
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ GV R V VDG N+ + +T K EDKS + P + L
Sbjct: 259 VRNATDAVGIVLKELKRQSSLGVFRLLVAVDGVNALWG-RTTLKREDKSPITPEELALIY 317
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW GAIVL +S +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 318 NLRKMVKNDWQGGAIVLTVSQTGSLFKPRKAYLPQELLGKEGFDTLDPFIPILVSNYNPK 377
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y WLQ T EG++E+ FL+ R P + C++
Sbjct: 378 EFEGCIQYYLENNWLQHEKAHTEEGKKELLFLSNRNPGLLERLCAY 423
>gi|338724965|ref|XP_003365051.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Equus
caballus]
Length = 356
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 205/346 (59%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y +P + A+F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 15 AKHGEQHEGQHYNIPLQDLKAVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 72
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W + + S
Sbjct: 73 TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRNLLQSTYN 132
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ +D ++A++WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 133 KQRLDQPLEASIWLKNFKTANERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 190
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 191 VRNATDAVGIVLKELKRQSSSGIFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELALIY 249
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL LS ++ R++ LP +L K GF+++DPF+PI V N +
Sbjct: 250 NLRKMVKNDWHGGAIVLTLSQTGSVFKPRKAFLPQELLGKEGFDTLDPFIPILVSNYNPK 309
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T +G++E+ FL+ P ++ C++
Sbjct: 310 EFESCIQYYLENNWLQHEKAHTEDGKKELLFLSNTNPGQLERLCAY 355
>gi|318067949|ref|NP_001188216.1| mitochondrial 28S ribosomal protein s29 [Ictalurus punctatus]
gi|308324294|gb|ADO29282.1| mitochondrial 28S ribosomal protein s29 [Ictalurus punctatus]
Length = 401
Score = 230 bits (587), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 203/347 (58%), Gaps = 13/347 (3%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H+ Q ++YT+P +F G +R F Q + FNE+ +++R LEL+ YLK +
Sbjct: 59 HTGQHAGQYYTIPPAHVHTMFPHGLPSR-FQMQIKTFNEACVMVRQPALELISYLKR-AD 116
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+ +P+ R++LYGE G GK+M+L + L++ +L++HIP W E+ S ++ G
Sbjct: 117 YSKPALRYLLYGETGGGKTMSLCHVLRFCSTQGWLVLHIPDAHLWVKNCSELLPSSSRPG 176
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D I A+ WL++F+ N +L ++ T++ YVW+ RE +E PLA L+ G+TRVK
Sbjct: 177 RFDQPIQASQWLKNFKITNDHFLT--KIKTTKRYVWTKRESTEEGRPLAELVNQGVTRVK 234
Query: 183 YASDVVDVLFTEIK---KLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLT 239
+SDVV L E++ +++G R V VDG N+ + +T+ K EDKS+V +TL
Sbjct: 235 SSSDVVGALLRELRLQVGSTSDGAFRMAVAVDGVNALWG-RTSLKKEDKSEVSAEELTLI 293
Query: 240 RSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELND 299
++ ++++DW+ GAI+ LS +L R ++LP +L + GF+ +DPFVPI V N+
Sbjct: 294 HNLRKMLRNDWSGGAILTTLSQTGSLYTSRSAYLPTELLGEVGFDKMDPFVPIPVSSYNE 353
Query: 300 EEFHNLLNLYESKKWL-----QTSEGREEIAFLTKRVPQKMYEFCSF 341
+EF + Y + WL QT EG++E+ FL+ R P + C+F
Sbjct: 354 QEFESCYLYYMDRNWLQHPHSQTEEGKKELIFLSNRNPSILERLCAF 400
>gi|308322435|gb|ADO28355.1| mitochondrial 28S ribosomal protein s29 [Ictalurus furcatus]
Length = 401
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 201/347 (57%), Gaps = 13/347 (3%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H+ Q ++YT+P +F G +R F Q + FNE+ +++R LEL+ YLK +
Sbjct: 59 HTGQHAGQYYTIPPAHVRTMFPHGLPSR-FQMQIKTFNEACVMVRQPALELISYLKR-AD 116
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+ +P+ R++LYGE G GK+M+L + L + +L++HIP W E+ S ++ G
Sbjct: 117 YSKPALRYLLYGETGCGKTMSLCHVLHFYSTQGWLVLHIPDAHLWVKNCSELLPSSSRPG 176
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D I A+ WL++F+ N +L ++ T++ YVW+ RE +E PLA L+ G+TRVK
Sbjct: 177 RFDQPIQASQWLKNFKITNDHFLT--KIKTTKRYVWTKRESTEEGRPLAELVNQGVTRVK 234
Query: 183 YASDVVDVLFTEIK---KLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLT 239
+SDVV L E++ +++G R V VDG N+ + +T K EDKS+V +TL
Sbjct: 235 SSSDVVGALLRELRLQVGSTSDGAFRMAVAVDGVNALWG-RTTLKKEDKSEVSAEELTLI 293
Query: 240 RSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELND 299
++ ++++DW+ GAI+ LS +L R ++LP +L + GF+ +DPFVPI V N+
Sbjct: 294 HNLRKMLRNDWSGGAILTTLSQTGSLYTSRSAYLPTELLGEVGFDKMDPFVPIPVSNYNE 353
Query: 300 EEFHNLLNLYESKKWL-----QTSEGREEIAFLTKRVPQKMYEFCSF 341
+EF + Y + WL QT EG++E+ FL+ R P + C+F
Sbjct: 354 QEFESCYLFYMDRNWLQHPHSQTEEGKKELIFLSNRNPSILERLCAF 400
>gi|62858457|ref|NP_001016002.1| death associated protein 3 [Xenopus (Silurana) tropicalis]
gi|187469513|gb|AAI66942.1| death associated protein 3 [Xenopus (Silurana) tropicalis]
Length = 394
Score = 230 bits (586), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 206/345 (59%), Gaps = 12/345 (3%)
Query: 3 HSKQDLYKFYTL-PDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
H++Q +FY+L +VR+A + G+ F +Q++ FNE+ +++R +EL+ YL++ +
Sbjct: 55 HTEQHEGQFYSLSAQDVRAAFPQ--GLPWRFQQQSKTFNETCVMVRRPAIELLRYLRN-S 111
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ +P+ R+VLYG+ G GKS+ L + + Y H +LL+ +P KE+ S
Sbjct: 112 DPTQPAVRYVLYGKRGTGKSLTLCHIVHYCHTQGWLLLQVPDAHVLVKNCKELMPSSFHS 171
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
D ++A+ WL++F+ N +L+ R T+Q YVWS RE ++ PL +++ G+TRV
Sbjct: 172 NRFDQPLEASNWLKNFKATNEHFLKQIR--TNQRYVWSKREATDEGRPLGEVVDQGLTRV 229
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
K ASD V V+ E+K+ S G + V VDG N+ + T + EDKS V P +TL +
Sbjct: 230 KSASDAVGVVLKELKRQSGGGAYQMLVSVDGVNALWGRST-IRKEDKSLVPPEELTLVHN 288
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+ +VQ+DW GAIVL ++ +L ++LP ++L K GF+++DPFVPI VP N++E
Sbjct: 289 LRKMVQNDWTGGAIVLTVTQAGSLYTPACAYLPHHLLGKEGFDALDPFVPIQVPNYNEKE 348
Query: 302 FHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
F + Y +KWLQ T EG+ E+ FL+ P+++ + C+F
Sbjct: 349 FESCYQYYLERKWLQHHKAHTPEGKAELRFLSDSNPKQLDKICAF 393
>gi|57089109|ref|XP_537250.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 3
[Canis lupus familiaris]
Length = 393
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 203/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+H +Q Y +P + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 52 ARHGEQHAALHYHIPLQDLKTVFPQGLPPR-FIMQVKTFNEACLMVRKPALELLHYLKN- 109
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W + + S
Sbjct: 110 TNFAHPAVRYVLYGEKGTGKTLSLCHVVHFCAKQDWLILHIPDAHLWVKNCRGLLQSSYN 169
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A++WL++F+ N ++L ++ ++YVW+ RE +E PL A++E G+TR
Sbjct: 170 KQRFDQPVEASIWLKNFKTANERFLS--QIKVQEKYVWNKRESTEKGSPLGAVVEQGLTR 227
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K S G V VDG N+ + +T+ K EDKS + P + L
Sbjct: 228 VRNATDAVGIVLKELKNQSCLGAFHLLVAVDGVNALWG-RTSLKREDKSLIAPEELALVC 286
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
S+ +V++DW+ GAIVL LS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 287 SLRKMVRNDWHGGAIVLTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 346
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y KWLQ T EG++E+ FL+ P ++ C++
Sbjct: 347 EFESCIQYYLENKWLQHEKAHTEEGKKELLFLSDANPGQLERLCAY 392
>gi|345802604|ref|XP_003434937.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 2
[Canis lupus familiaris]
Length = 356
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 203/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+H +Q Y +P + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 15 ARHGEQHAALHYHIPLQDLKTVFPQGLPPR-FIMQVKTFNEACLMVRKPALELLHYLKN- 72
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W + + S
Sbjct: 73 TNFAHPAVRYVLYGEKGTGKTLSLCHVVHFCAKQDWLILHIPDAHLWVKNCRGLLQSSYN 132
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A++WL++F+ N ++L ++ ++YVW+ RE +E PL A++E G+TR
Sbjct: 133 KQRFDQPVEASIWLKNFKTANERFLS--QIKVQEKYVWNKRESTEKGSPLGAVVEQGLTR 190
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K S G V VDG N+ + +T+ K EDKS + P + L
Sbjct: 191 VRNATDAVGIVLKELKNQSCLGAFHLLVAVDGVNALWG-RTSLKREDKSLIAPEELALVC 249
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
S+ +V++DW+ GAIVL LS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 250 SLRKMVRNDWHGGAIVLTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 309
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y KWLQ T EG++E+ FL+ P ++ C++
Sbjct: 310 EFESCIQYYLENKWLQHEKAHTEEGKKELLFLSDANPGQLERLCAY 355
>gi|213624535|gb|AAI71235.1| death associated protein 3 [Xenopus (Silurana) tropicalis]
gi|213627384|gb|AAI71229.1| death associated protein 3 [Xenopus (Silurana) tropicalis]
Length = 394
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/344 (36%), Positives = 203/344 (59%), Gaps = 10/344 (2%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H++Q +FY+L + A F G R F +Q++ FNE+ +++R +EL+ YL++ ++
Sbjct: 55 HTEQHEGQFYSLSAQDVRATFPQGLPWR-FQQQSKTFNETCVMVRRPAIELLRYLRN-SD 112
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+P+ R+VLYG+ G GKS+ L + + Y H +LL+ +P KE+ S
Sbjct: 113 PTQPAVRYVLYGKRGTGKSLTLCHIVHYCHTQGWLLLQVPDAHVLVKNCKELMPSSFHSN 172
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D ++A+ WL++F+ N +L+ R T+Q YVWS RE ++ PL +++ G+TRVK
Sbjct: 173 RFDQPLEASNWLKNFKATNEHFLKQIR--TNQRYVWSKREATDEGRPLGEVVDQGLTRVK 230
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
ASD V V+ E+K+ S G + V VDG N+ + T + EDKS V P +TL ++
Sbjct: 231 SASDAVGVVLKELKRQSGGGAYQMLVSVDGVNALWGRST-LRKEDKSLVPPEELTLVHNL 289
Query: 243 INLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEF 302
+VQ+DW GAIVL ++ +L ++LP ++L K GF+++DPFVPI VP N++EF
Sbjct: 290 RKMVQNDWTGGAIVLTVTQAGSLYTPACAYLPHHLLGKEGFDALDPFVPIQVPNYNEKEF 349
Query: 303 HNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
+ Y +KWLQ T EG+ E+ FL+ P+++ + C+F
Sbjct: 350 ESCYQYYLERKWLQHHKAHTPEGKAELRFLSDSNPKQLDKICAF 393
>gi|426216791|ref|XP_004002641.1| PREDICTED: 28S ribosomal protein S29, mitochondrial [Ovis aries]
Length = 397
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 203/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + + Y + + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 56 AKHGEQHVGQHYNISIQELKTVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 114 TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDAHLWVKNCRDLLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A++WL++F+ N ++L ++ +YVW+ RE +E PLA ++E GI R
Sbjct: 174 KQRFDQPLEASVWLKNFKTANERFLS--QIKVQDKYVWNKRESTEKGSPLAEVVEQGIMR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ R V VDG N+ + +T K EDKS + P + L
Sbjct: 232 VRNATDAVGIVLKELKRQSSLGIFRLLVAVDGVNALWG-RTTLKREDKSLIAPEELALIY 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW GAIVL +S +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 291 NLRKMVKNDWQGGAIVLTVSQTGSLFKPRKAYLPQELLGKEGFDTLDPFIPILVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y WLQ T EG++E+ FL+ R P + C++
Sbjct: 351 EFEACIQYYLENSWLQHEKAHTEEGKKELLFLSNRNPGLLERLCAY 396
>gi|24212384|sp|Q9ER88.1|RT29_MOUSE RecName: Full=28S ribosomal protein S29, mitochondrial;
Short=MRP-S29; Short=S29mt; AltName:
Full=Death-associated protein 3; Short=DAP-3; Flags:
Precursor
gi|9955696|emb|CAC05583.1| death associated protein 3 [Mus musculus]
gi|37537245|gb|AAH19566.2| Death associated protein 3 [Mus musculus]
gi|148683295|gb|EDL15242.1| death associated protein 3, isoform CRA_a [Mus musculus]
Length = 391
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 204/345 (59%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 50 AKHGEQHEGQHYSIPLQDLKTVFPHGLPPR-YMMQVKTFGEACLMVRKPALELLGYLKN- 107
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + +++L++HIP W +E+ S
Sbjct: 108 TNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCARHDWLILHIPDAHLWVKNCRELLQSTHN 167
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 168 KQRFDQPLEASTWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTR 225
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V V+ E+K S G+ V VDG N+ + +T K ED++ + P ++L
Sbjct: 226 VRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWG-RTTLKKEDRTLIAPEELSLVH 284
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL+LS +L R ++LP +L K GF +++PF+PI +P N +
Sbjct: 285 NLRKMVKNDWHGGAIVLSLSQTGSLFKSRTAYLPHELLGKEGFNALEPFLPILIPNYNPK 344
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P+++ C+
Sbjct: 345 EFESSFQYYLENNWLQHEKASTEEGRKELRFLSNCNPEQLERLCA 389
>gi|256985203|ref|NP_075370.2| 28S ribosomal protein S29, mitochondrial isoform 2 [Mus musculus]
Length = 396
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 204/345 (59%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 55 AKHGEQHEGQHYSIPLQDLKTVFPHGLPPR-YMMQVKTFGEACLMVRKPALELLGYLKN- 112
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + +++L++HIP W +E+ S
Sbjct: 113 TNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCARHDWLILHIPDAHLWVKNCRELLQSTHN 172
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 173 KQRFDQPLEASTWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTR 230
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V V+ E+K S G+ V VDG N+ + +T K ED++ + P ++L
Sbjct: 231 VRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWG-RTTLKKEDRTLIAPEELSLVH 289
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL+LS +L R ++LP +L K GF +++PF+PI +P N +
Sbjct: 290 NLRKMVKNDWHGGAIVLSLSQTGSLFKSRTAYLPHELLGKEGFNALEPFLPILIPNYNPK 349
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P+++ C+
Sbjct: 350 EFESSFQYYLENNWLQHEKASTEEGRKELRFLSNCNPEQLERLCA 394
>gi|301785830|ref|XP_002928327.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 397
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+H +Q + Y +P + F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 56 ARHGEQHEARHYCIPLQDLRTTFPHGLPPR-FGMQVRTFNEACLMVRRPALELLRYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 114 TNFAHPAVRYVLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 174 KQRFDQPMEASSWLKNFKTVNERFLS--QIKVQEKYVWNKRESTEKGRPLGEVVEQGLTR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K S G R V VDG N+ + +T K EDKS V P + L
Sbjct: 232 VRNATDAVGIVLKELKSQSRLGAFRLLVAVDGVNALWG-RTTLKREDKSPVAPEELALVH 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
S+ +V++DW+ GAIVL LS +L R+++LP +L K GF+++DPF+PI V + +
Sbjct: 291 SLRKMVRNDWHGGAIVLTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYSPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P ++ C++
Sbjct: 351 EFESCIQYYLENSWLQHEKAHTEEGKKELLFLSNANPGQLERLCAY 396
>gi|335286776|ref|XP_003355180.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 1 [Sus
scrofa]
gi|335308282|ref|XP_003361167.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Sus
scrofa]
Length = 397
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 200/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y + + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 56 AKHREQHEGQHYNISLQELKTVFPHGLPPR-FAMQVKTFNEACLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + L + + N+L++HIP W +++ S
Sbjct: 114 TNFAHPAVRYVLYGEKGTGKTLSLCHILHFCAKQNWLILHIPDAHIWVKNCRDLLQSNYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N +L ++ ++YVW+ RE +E PL ++E GI R
Sbjct: 174 KQRFDQPLEASTWLKNFKTANEHFLS--QIKVQEKYVWNKRESTEKGRPLGEVVEQGIMR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 232 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELALIH 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW GAIVL +S +L R ++LP +L K GF+++DPF+PI V N +
Sbjct: 291 NLRKMVKNDWQGGAIVLTVSQTGSLFKPRNAYLPQELLGKEGFDALDPFIPILVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ R P ++ C++
Sbjct: 351 EFESCIQYYLENNWLQHEKAHTEEGKKELLFLSNRNPGQLERLCAY 396
>gi|344286870|ref|XP_003415179.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 1
[Loxodonta africana]
Length = 397
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y +P + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 56 AKHGEQQEGQHYNIPHQDLKTVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++H+P RW +++ S
Sbjct: 114 TNFAHPAVRYILYGEKGTGKTLSLCHVVHFCAKQDWLILHVPDAHRWVKNCRDLLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ +D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 174 KQRLDQPLEASTWLKNFRTSNERFLS--QIKVQEKYVWNKRESTEKGSPLGDVVEQGITR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+++ S+ G+ V VDG N+ + +T K EDKS + P +
Sbjct: 232 VRNATDAVGIVLKELRRQSSCGIFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELAFIY 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DWN GAIVL LS +L R +++P +L + GF ++DPF+PI V N +
Sbjct: 291 NLRKMVKNDWNGGAIVLTLSQTGSLFKPRTAYMPQELLGEEGFNALDPFIPILVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T G +E+ FL+ P ++ C++
Sbjct: 351 EFQSCIQYYLENNWLQHEKAHTEGGMKELLFLSNANPGQLERLCAY 396
>gi|256985210|ref|NP_001011950.2| death associated protein 3 [Rattus norvegicus]
gi|149048101|gb|EDM00677.1| rCG62665 [Rattus norvegicus]
Length = 396
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 204/345 (59%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 55 AKHGEQHEGQHYSIPPQDLKTVFPHGLPPR-YAMQVKTFGEACLMVRKPALELLGYLKN- 112
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + ++++L++HIP W E+ S
Sbjct: 113 TNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCAKSDWLILHIPDAHLWVKNCGELLQSTYN 172
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 173 KQRFDQPLEASTWLKNFKTTNERFLG--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTR 230
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V V+ E+K S+ G+ V VDG N+ + +T K ED++ + P + L R
Sbjct: 231 VRNATDAVGVVLKELKTQSSLGLFHLLVAVDGVNALWG-RTTLKREDRTLIAPEELALVR 289
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL+LS +L R ++LP +L K GF +++PF+PI + N +
Sbjct: 290 NLRKMVKNDWHGGAIVLSLSQTGSLFKSRTAYLPHELLGKEGFNALEPFLPILISNYNPK 349
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P+++ C+
Sbjct: 350 EFESSFQYYLENNWLQHEKASTEEGRKELKFLSNCNPEQLERLCA 394
>gi|344286872|ref|XP_003415180.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 2
[Loxodonta africana]
Length = 356
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y +P + +F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 15 AKHGEQQEGQHYNIPHQDLKTVFPHGLPPR-FVMQVKTFNEACLMVRKPALELLHYLKN- 72
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++H+P RW +++ S
Sbjct: 73 TNFAHPAVRYILYGEKGTGKTLSLCHVVHFCAKQDWLILHVPDAHRWVKNCRDLLQSTYN 132
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ +D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 133 KQRLDQPLEASTWLKNFRTSNERFLS--QIKVQEKYVWNKRESTEKGSPLGDVVEQGITR 190
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+++ S+ G+ V VDG N+ + +T K EDKS + P +
Sbjct: 191 VRNATDAVGIVLKELRRQSSCGIFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELAFIY 249
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DWN GAIVL LS +L R +++P +L + GF ++DPF+PI V N +
Sbjct: 250 NLRKMVKNDWNGGAIVLTLSQTGSLFKPRTAYMPQELLGEEGFNALDPFIPILVSNYNPK 309
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T G +E+ FL+ P ++ C++
Sbjct: 310 EFQSCIQYYLENNWLQHEKAHTEGGMKELLFLSNANPGQLERLCAY 355
>gi|55249775|gb|AAH85878.1| Death associated protein 3 [Rattus norvegicus]
Length = 391
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 204/345 (59%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 50 AKHGEQHEGQHYSIPPQDLKTVFPHGLPPR-YAMQVKTFGEACLMVRKPALELLGYLKN- 107
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + ++++L++HIP W E+ S
Sbjct: 108 TNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCAKSDWLILHIPDAHLWVKNCGELLQSTYN 167
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 168 KQRFDQPLEASTWLKNFKTTNERFLG--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTR 225
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V V+ E+K S+ G+ V VDG N+ + +T K ED++ + P + L R
Sbjct: 226 VRNATDAVGVVLKELKTQSSLGLFHLLVAVDGVNALWG-RTTLKREDRTLIAPEELALVR 284
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL+LS +L R ++LP +L K GF +++PF+PI + N +
Sbjct: 285 NLRKMVKNDWHGGAIVLSLSQTGSLFKSRTAYLPHELLGKEGFNALEPFLPILISNYNPK 344
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P+++ C+
Sbjct: 345 EFESSFQYYLENNWLQHEKASTEEGRKELKFLSNCNPEQLERLCA 389
>gi|348579797|ref|XP_003475665.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 3
[Cavia porcellus]
Length = 356
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 204/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+H +Q + Y++P + +F G R F Q + F E+ +++R LEL+ YLK+
Sbjct: 15 AQHGEQHEGQHYSVPLQDLKTVFPHGLPPR-FVMQVKTFGEACLMVRKPALELLHYLKN- 72
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L +A+ + ++ +L++HIP W +E+ S
Sbjct: 73 TNFAYPAVRYVLYGERGTGKTLSLCHAIHFCAKHGWLILHIPDAHLWVKNCRELLQSTYN 132
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N +L ++ ++Y+W+ RE +E PL ++E GITR
Sbjct: 133 KQRFDQPLEASTWLKNFKITNEHFLS--QIKVQEKYIWNKRESTEKGSPLGEVVEQGITR 190
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
VK A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 191 VKNATDAVGIVLKELKRQSSSGLFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELALIY 249
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++ +DW+ GAIVL LS +L R +++LP +L K GF+++DPFVPI V N +
Sbjct: 250 NLRKMMWNDWHGGAIVLTLSQTGSLFKRSKAYLPHELLGKEGFDALDPFVPILVSNYNLK 309
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + ++ Y WLQ T EG++E+ FL+ P ++ C++
Sbjct: 310 EFESCIHYYLENSWLQHEKAPTEEGKKELLFLSNANPAQLERLCAY 355
>gi|344241968|gb|EGV98071.1| 28S ribosomal protein S29, mitochondrial [Cricetulus griseus]
Length = 391
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 203/345 (58%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q K+Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 50 AKHGEQHEGKYYSIPLQDLKTVFPHGLPPR-YMMQVKTFGEACLMVRKPALELLGYLKN- 107
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + ++++L++HIP W +E+ S
Sbjct: 108 TNFSHPAVRYLLYGEKGTGKTLSLCHAVHFCAKHDWLILHIPDAHLWVKNCQELLQSTYN 167
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 168 KQRFDQPLEASTWLKNFKTTNKRFLS--QIKVEEKYVWNKRESTEKGSPLGEVVEQGITR 225
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E++ S+ G+ R V VDG N+ + T K ED++ + P + L
Sbjct: 226 VRNATDAVGIVLKELRTQSSSGLFRLLVAVDGINALWGRST-LKREDRTLIAPEELALVH 284
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
S+ +V+++W+ GAIVL+LS +L ++LP +L K GF+++DPF+PI + +
Sbjct: 285 SLRKMVKNNWHGGAIVLSLSQTGSLFKSSTAYLPHELLGKEGFDALDPFLPILISNYTPK 344
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P ++ C+
Sbjct: 345 EFESSFQYYLENNWLQHEKAATEEGRKELKFLSNCNPGQLERLCA 389
>gi|431892335|gb|ELK02775.1| 28S ribosomal protein S29, mitochondrial [Pteropus alecto]
Length = 397
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 200/345 (57%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+H +Q + Y +P + +F G R F Q + FNE+ +++R LEL+ +L++
Sbjct: 56 ARHEEQHEGQHYRVPLQDLETVFSHGLPPR-FRMQVKTFNEACLMVRKPGLELLRHLRN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
++F RP+ R++LYGE G GK+++L ++L + +L +H+P W +E+ S
Sbjct: 114 SDFSRPAVRYLLYGEKGTGKTLSLCHSLHFCATQGWLTLHVPDAHLWVKNCRELLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ T ++YVW+ RE +E + PL ++E GITR
Sbjct: 174 KERFDQPVEASTWLKNFKTANKRFLS--QIKTQEKYVWNKRESTEKDSPLGEVVEQGITR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+ A+D V V+ E++ S G R V VDG N+ + +T ED+S + P + L
Sbjct: 232 GRNATDAVGVVLKELRGQSAAGAFRLLVAVDGVNALWG-RTTLTREDRSPIAPGELALVC 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
S+ +V++DW+ GAIVL LS ++ R++HLP +L + GF+++DPFVPI VP N +
Sbjct: 291 SLRKMVRNDWSGGAIVLTLSQTGSVFKPRKAHLPQELLGEEGFDALDPFVPILVPSYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + + Y WLQ T EG+ E+ FL+ P ++ C+
Sbjct: 351 EFESCIQYYLENDWLQHEKARTEEGKRELLFLSHSNPGQLERLCA 395
>gi|449283740|gb|EMC90338.1| 28S ribosomal protein S29, mitochondrial [Columba livia]
Length = 397
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 199/339 (58%), Gaps = 12/339 (3%)
Query: 3 HSKQDLYKFYTLP-DEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
H++Q + Y++P DE+++ G+ F +Q + FNE+ +++R LEL YL++ T
Sbjct: 58 HAEQHEGRLYSIPLDELKTVFPH--GLPYRFQQQIKTFNEACVMVRKPALELFTYLRN-T 114
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
NF P+ R+V+YGE G GK+M L + + Y +L++H+P W +E+ S +
Sbjct: 115 NFAHPAVRYVIYGERGTGKTMTLCHLVHYCARQGWLVLHVPDAHLWVKNCRELLQSSYNK 174
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
+D + A+ WL++F+ N ++L++ + T ++Y+W R+++EA PLA ++E G+ RV
Sbjct: 175 ERLDQPLQASSWLKNFKTSNERFLKE--IKTQKQYMWGRRDRTEAGRPLAEVVEQGLARV 232
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
+ ASD V V+ E+K+ S G R V VDG N+ + +T K EDKS V P +TL +
Sbjct: 233 RNASDAVGVVLKELKQQSRLGPFRLLVAVDGVNALWG-RTTLKKEDKSPVAPEELTLVHN 291
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+ ++ +DW+ GA V LS L ++LP +L K GF+++DPFVPI VP + E
Sbjct: 292 LRKMLMNDWSGGAAVTTLSQTGALFKPSSAYLPQELLGKEGFDALDPFVPIPVPNYSPRE 351
Query: 302 FHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKM 335
F + Y +KWLQ T G+EE+ FL+ P+++
Sbjct: 352 FESCYQYYLQRKWLQHEKAHTEAGKEELRFLSGSNPRQL 390
>gi|12852994|dbj|BAB29605.1| unnamed protein product [Mus musculus]
Length = 396
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 202/345 (58%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y++P + +F G R + Q + F E +++R LEL+GYLK+
Sbjct: 55 AKHGEQHEGQHYSIPLQDLKTVFPHGLPPR-YMMQVKTFGERCLMVRKPALELLGYLKN- 112
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + +++L++HIP W +E+ S
Sbjct: 113 TNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCARHDWLILHIPDAHLWVKNCRELLQSTHN 172
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++ + WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 173 KQRFDQPLEGSTWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTR 230
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V V+ E+K S G+ V VDG N+ + +T K ED++ + P ++L
Sbjct: 231 VRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWG-RTTLKKEDRTLIAPEELSLVH 289
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL+LS +L R ++LP +L K GF +++PF+PI +P N +
Sbjct: 290 NLRKMVKNDWHGGAIVLSLSQTGSLFKSRTAYLPHELLGKEGFNALEPFLPILIPNYNPK 349
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P+++ C+
Sbjct: 350 EFESSFQYYLENNWLQHEKASTEEGRKELRFLSNCNPEQLERLCA 394
>gi|348579793|ref|XP_003475663.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 1
[Cavia porcellus]
Length = 397
Score = 226 bits (577), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 204/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+H +Q + Y++P + +F G R F Q + F E+ +++R LEL+ YLK+
Sbjct: 56 AQHGEQHEGQHYSVPLQDLKTVFPHGLPPR-FVMQVKTFGEACLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L +A+ + ++ +L++HIP W +E+ S
Sbjct: 114 TNFAYPAVRYVLYGERGTGKTLSLCHAIHFCAKHGWLILHIPDAHLWVKNCRELLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N +L ++ ++Y+W+ RE +E PL ++E GITR
Sbjct: 174 KQRFDQPLEASTWLKNFKITNEHFLS--QIKVQEKYIWNKRESTEKGSPLGEVVEQGITR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
VK A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 232 VKNATDAVGIVLKELKRQSSSGLFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELALIY 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++ +DW+ GAIVL LS +L R +++LP +L K GF+++DPFVPI V N +
Sbjct: 291 NLRKMMWNDWHGGAIVLTLSQTGSLFKRSKAYLPHELLGKEGFDALDPFVPILVSNYNLK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + ++ Y WLQ T EG++E+ FL+ P ++ C++
Sbjct: 351 EFESCIHYYLENSWLQHEKAPTEEGKKELLFLSNANPAQLERLCAY 396
>gi|354478982|ref|XP_003501693.1| PREDICTED: LOW QUALITY PROTEIN: 28S ribosomal protein S29,
mitochondrial-like [Cricetulus griseus]
Length = 517
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 203/345 (58%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q K+Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 176 AKHGEQHEGKYYSIPLQDLKTVFPHGLPPR-YMMQVKTFGEACLMVRKPALELLGYLKN- 233
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + ++++L++HIP W +E+ S
Sbjct: 234 TNFSHPAVRYLLYGEKGTGKTLSLCHAVHFCAKHDWLILHIPDAHLWVKNCQELLQSTYN 293
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 294 KQRFDQPLEASTWLKNFKTTNKRFLS--QIKVEEKYVWNKRESTEKGSPLGEVVEQGITR 351
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E++ S+ G+ R V VDG N+ + T K ED++ + P + L
Sbjct: 352 VRNATDAVGIVLKELRTQSSSGLFRLLVAVDGINALWGRST-LKREDRTLIAPEELALVH 410
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
S+ +V+++W+ GAIVL+LS +L ++LP +L K GF+++DPF+PI + +
Sbjct: 411 SLRKMVKNNWHGGAIVLSLSQTGSLFKSSTAYLPHELLGKEGFDALDPFLPILISNYTPK 470
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P ++ C+
Sbjct: 471 EFESSFQYYLENNWLQHEKAATEEGRKELKFLSNCNPGQLERLCA 515
>gi|417410390|gb|JAA51669.1| Putative 28s ribosomal protein s29 mitochondrial, partial [Desmodus
rotundus]
Length = 398
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 202/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH ++ + Y+LP + IF G R F Q + FNE+ +++R LEL+ +LK+
Sbjct: 57 AKHEERHEGQHYSLPLQDVKTIFPQGLPPR-FVMQMKTFNEACLMVRKPALELLHHLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNFD P+ R+VLYGE G GK+++L + + + + ++L++HIP W ++ S
Sbjct: 115 TNFDHPAVRYVLYGEKGTGKTLSLCHIIHFCAKQDWLILHIPDGHLWVKNCHDLLQSTYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A++WL++F+ N ++L ++ + YVW+ RE +E L ++E GITR
Sbjct: 175 KQRFDQPLEASVWLKNFKTANERFLS--QIKIQETYVWNKRESTEKGSLLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSSGAFHLLVAVDGVNALWG-RTTLKREDKSPIAPEELALIY 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DWN GA+VL LS +L R ++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMVKNDWNGGAVVLTLSQTGSLFKPRTAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P ++ C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAHTEEGKKELLFLSNANPGQLERLCAY 397
>gi|395845195|ref|XP_003795327.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 3
[Otolemur garnettii]
Length = 356
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 202/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y +P + +F G R F Q + F E+ +++R +LEL+ LK+
Sbjct: 15 AKHGEQHEGQHYNIPLQDLKTVFPHGLPPR-FTMQVKTFGEACLMVRKPVLELLHCLKN- 72
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 73 TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPNAHLWVKNCQDLLQSTYN 132
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N +L ++ ++YVW+ R+ +E PL ++E GITR
Sbjct: 133 KERFDQPLEASAWLKNFKTTNEHFL--GQIKVQEKYVWNKRDSTEKGSPLGEVVEQGITR 190
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ R V VDG N+ + +T K EDKS + P + L
Sbjct: 191 VRNATDAVGIVLKELKRQSSLGIFRLLVAVDGINALWG-RTTLKKEDKSLMAPEELALIH 249
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIV LS +L R ++LP +L K GF+++DPF+PI V N +
Sbjct: 250 NLRKMVKNDWHGGAIVSTLSQTGSLFKPRRAYLPQELLGKEGFDALDPFIPIQVSNYNPK 309
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y KWLQ T EG++E+ FL+ P ++ C++
Sbjct: 310 EFESCIQYYLENKWLQHEKAHTEEGKKELLFLSNANPWQLERLCAY 355
>gi|395845191|ref|XP_003795325.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 1
[Otolemur garnettii]
Length = 397
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 202/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y +P + +F G R F Q + F E+ +++R +LEL+ LK+
Sbjct: 56 AKHGEQHEGQHYNIPLQDLKTVFPHGLPPR-FTMQVKTFGEACLMVRKPVLELLHCLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 114 TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPNAHLWVKNCQDLLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N +L ++ ++YVW+ R+ +E PL ++E GITR
Sbjct: 174 KERFDQPLEASAWLKNFKTTNEHFLG--QIKVQEKYVWNKRDSTEKGSPLGEVVEQGITR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ R V VDG N+ + +T K EDKS + P + L
Sbjct: 232 VRNATDAVGIVLKELKRQSSLGIFRLLVAVDGINALWG-RTTLKKEDKSLMAPEELALIH 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIV LS +L R ++LP +L K GF+++DPF+PI V N +
Sbjct: 291 NLRKMVKNDWHGGAIVSTLSQTGSLFKPRRAYLPQELLGKEGFDALDPFIPIQVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y KWLQ T EG++E+ FL+ P ++ C++
Sbjct: 351 EFESCIQYYLENKWLQHEKAHTEEGKKELLFLSNANPWQLERLCAY 396
>gi|345802602|ref|XP_003434936.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 1
[Canis lupus familiaris]
Length = 359
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 191/314 (60%), Gaps = 9/314 (2%)
Query: 33 NEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAH 92
++ + FNE+ +++R LEL+ YLK+ TNF P+ R+VLYGE G GK+++L + + +
Sbjct: 49 DDPVKTFNEACLMVRKPALELLHYLKN-TNFAHPAVRYVLYGEKGTGKTLSLCHVVHFCA 107
Query: 93 ENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTT 152
+ ++L++HIP W + + S + D ++A++WL++F+ N ++L ++
Sbjct: 108 KQDWLILHIPDAHLWVKNCRGLLQSSYNKQRFDQPVEASIWLKNFKTANERFLS--QIKV 165
Query: 153 SQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDG 212
++YVW+ RE +E PL A++E G+TRV+ A+D V ++ E+K S G V VDG
Sbjct: 166 QEKYVWNKRESTEKGSPLGAVVEQGLTRVRNATDAVGIVLKELKNQSCLGAFHLLVAVDG 225
Query: 213 YNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESH 272
N+ + +T+ K EDKS + P + L S+ +V++DW+ GAIVL LS +L R+++
Sbjct: 226 VNALWG-RTSLKREDKSLIAPEELALVCSLRKMVRNDWHGGAIVLTLSQTGSLFKPRKAY 284
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFL 327
LP +L K GF+++DPF+PI V N +EF + + Y KWLQ T EG++E+ FL
Sbjct: 285 LPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENKWLQHEKAHTEEGKKELLFL 344
Query: 328 TKRVPQKMYEFCSF 341
+ P ++ C++
Sbjct: 345 SDANPGQLERLCAY 358
>gi|338724963|ref|XP_003365050.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Equus
caballus]
Length = 363
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 191/314 (60%), Gaps = 9/314 (2%)
Query: 33 NEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAH 92
++ + FNE+ +++R LEL+ YLK+ TNF P+ R+VLYGE G GK+++L + + +
Sbjct: 53 SDPVKTFNEACLMVRKPALELLHYLKN-TNFAHPAVRYVLYGEKGTGKTLSLCHIIHFCA 111
Query: 93 ENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTT 152
+ ++L++HIP W + + S + +D ++A++WL++F+ N ++L ++
Sbjct: 112 KQDWLILHIPDAHLWVKNCRNLLQSTYNKQRLDQPLEASIWLKNFKTANERFLS--QIKV 169
Query: 153 SQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDG 212
++YVW+ RE +E PL ++E GITRV+ A+D V ++ E+K+ S+ G+ V VDG
Sbjct: 170 QEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSSGIFHLLVAVDG 229
Query: 213 YNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESH 272
N+ + +T K EDKS + P + L ++ +V++DW+ GAIVL LS ++ R++
Sbjct: 230 VNALWG-RTTLKREDKSPIAPEELALIYNLRKMVKNDWHGGAIVLTLSQTGSVFKPRKAF 288
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFL 327
LP +L K GF+++DPF+PI V N +EF + + Y WLQ T +G++E+ FL
Sbjct: 289 LPQELLGKEGFDTLDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAHTEDGKKELLFL 348
Query: 328 TKRVPQKMYEFCSF 341
+ P ++ C++
Sbjct: 349 SNTNPGQLERLCAY 362
>gi|197098438|ref|NP_001127473.1| 28S ribosomal protein S29, mitochondrial [Pongo abelii]
gi|55730281|emb|CAH91863.1| hypothetical protein [Pongo abelii]
Length = 398
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 200/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + ++L++HIP W +++ S
Sbjct: 115 TNFAYPAVRYLLYGEKGTGKTLSLCHVTHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|296229120|ref|XP_002760039.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 1
[Callithrix jacchus]
Length = 397
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 199/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 56 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTFSEAYLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP W +E+ S
Sbjct: 114 TNFSYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRELLQSNYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 174 KQRFDQPLEASSWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDK + P + L
Sbjct: 232 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINAVWG-RTTLKREDKRPIAPEELALVH 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ GAIVL LS +L R ++LP +L K GF+++DPF+PI V N +
Sbjct: 291 NLRKMVKNDWHGGAIVLTLSQTGSLFKPRNAYLPQELLGKEGFDALDPFIPILVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++++ FL+ P + C++
Sbjct: 351 EFESCIQYYLENNWLQHEKAHTEEGKKQLLFLSNANPSLLERHCAY 396
>gi|351696656|gb|EHA99574.1| 28S ribosomal protein S29, mitochondrial [Heterocephalus glaber]
Length = 397
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 205/347 (59%), Gaps = 12/347 (3%)
Query: 1 TKHSKQDLYKFYTLP-DEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKS 59
+H +Q + Y++P ++++A+ G+ F Q + F E+ ++IR LEL+ YLK+
Sbjct: 56 AQHREQHEGQHYSIPLQDLKTALPH--GLPPRFAMQVKTFGEACLMIRRPALELLHYLKN 113
Query: 60 MTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLT 119
TNF P+ R++LYGE G GK+++L + + + ++ +L++HIP W +E+ S
Sbjct: 114 -TNFAHPAVRYLLYGERGTGKTLSLCHVIHFCAKHGWLILHIPDAHLWVKNCRELLRSTY 172
Query: 120 KEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGIT 179
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GIT
Sbjct: 173 SKQRFDQPLEASTWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGIT 230
Query: 180 RVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLT 239
RVK A+D V ++ E+K+ S+ G+ V +DG N+ + +T K ED+S + + L
Sbjct: 231 RVKNATDAVGIVLKELKRQSSAGLFHLLVAMDGVNALWG-RTTLKREDQSLIAAEELALI 289
Query: 240 RSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELND 299
++ + ++DW+ GAIVLALS +L ++HLP +L K GF+++DPF+PI V
Sbjct: 290 HNLRKMTRNDWHGGAIVLALSQTGSLFKPSKAHLPQDLLGKEGFDALDPFLPILVSNYKP 349
Query: 300 EEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
+EF + ++ Y W+Q T EG++E+ FL+ P ++ C++
Sbjct: 350 KEFESCVHYYLENNWIQHEKAPTEEGKKELLFLSNANPGQLERLCAY 396
>gi|426332003|ref|XP_004026982.1| PREDICTED: 28S ribosomal protein S29, mitochondrial [Gorilla
gorilla gorilla]
Length = 398
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDMKTVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSFGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|348579795|ref|XP_003475664.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 2
[Cavia porcellus]
Length = 363
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 188/310 (60%), Gaps = 9/310 (2%)
Query: 37 QIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNY 96
+ F E+ +++R LEL+ YLK+ TNF P+ R+VLYGE G GK+++L +A+ + ++ +
Sbjct: 57 KTFGEACLMVRKPALELLHYLKN-TNFAYPAVRYVLYGERGTGKTLSLCHAIHFCAKHGW 115
Query: 97 LLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEY 156
L++HIP W +E+ S + D ++A+ WL++F+ N +L ++ ++Y
Sbjct: 116 LILHIPDAHLWVKNCRELLQSTYNKQRFDQPLEASTWLKNFKITNEHFLS--QIKVQEKY 173
Query: 157 VWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSF 216
+W+ RE +E PL ++E GITRVK A+D V ++ E+K+ S+ G+ V VDG N+
Sbjct: 174 IWNKRESTEKGSPLGEVVEQGITRVKNATDAVGIVLKELKRQSSSGLFHLLVAVDGVNAL 233
Query: 217 FAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLY 276
+ +T K EDKS + P + L ++ ++ +DW+ GAIVL LS +L R +++LP
Sbjct: 234 WG-RTTLKREDKSPIAPEELALIYNLRKMMWNDWHGGAIVLTLSQTGSLFKRSKAYLPHE 292
Query: 277 MLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRV 331
+L K GF+++DPFVPI V N +EF + ++ Y WLQ T EG++E+ FL+
Sbjct: 293 LLGKEGFDALDPFVPILVSNYNLKEFESCIHYYLENSWLQHEKAPTEEGKKELLFLSNAN 352
Query: 332 PQKMYEFCSF 341
P ++ C++
Sbjct: 353 PAQLERLCAY 362
>gi|54695856|gb|AAV38300.1| death associated protein 3 [synthetic construct]
gi|61367201|gb|AAX42965.1| death associated protein 3 [synthetic construct]
gi|61369407|gb|AAX43331.1| death associated protein 3 [synthetic construct]
Length = 399
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLETVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|4758118|ref|NP_004623.1| 28S ribosomal protein S29, mitochondrial isoform 1 [Homo sapiens]
gi|16905526|ref|NP_387506.1| 28S ribosomal protein S29, mitochondrial isoform 1 [Homo sapiens]
gi|315434212|ref|NP_001186778.1| 28S ribosomal protein S29, mitochondrial isoform 1 [Homo sapiens]
gi|1706299|sp|P51398.1|RT29_HUMAN RecName: Full=28S ribosomal protein S29, mitochondrial;
Short=MRP-S29; Short=S29mt; AltName:
Full=Death-associated protein 3; Short=DAP-3; AltName:
Full=Ionizing radiation resistance conferring protein;
Flags: Precursor
gi|1089850|emb|CAA58535.1| DAP-3 [Homo sapiens]
gi|51491170|emb|CAH18651.1| hypothetical protein [Homo sapiens]
gi|54695858|gb|AAV38301.1| death associated protein 3 [Homo sapiens]
gi|61357224|gb|AAX41354.1| death associated protein 3 [synthetic construct]
gi|61359294|gb|AAX41696.1| death associated protein 3 [synthetic construct]
gi|77567642|gb|AAI07489.1| Death associated protein 3 [Homo sapiens]
gi|77567819|gb|AAI07488.1| Death associated protein 3 [Homo sapiens]
gi|119573429|gb|EAW53044.1| death associated protein 3, isoform CRA_b [Homo sapiens]
gi|119573430|gb|EAW53045.1| death associated protein 3, isoform CRA_b [Homo sapiens]
gi|119573432|gb|EAW53047.1| death associated protein 3, isoform CRA_b [Homo sapiens]
gi|119573434|gb|EAW53049.1| death associated protein 3, isoform CRA_b [Homo sapiens]
gi|119573436|gb|EAW53051.1| death associated protein 3, isoform CRA_b [Homo sapiens]
gi|158259695|dbj|BAF85806.1| unnamed protein product [Homo sapiens]
gi|307685523|dbj|BAJ20692.1| death associated protein 3 [synthetic construct]
Length = 398
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLETVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|397500894|ref|XP_003821139.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 1 [Pan
paniscus]
gi|410219006|gb|JAA06722.1| death associated protein 3 [Pan troglodytes]
gi|410219008|gb|JAA06723.1| death associated protein 3 [Pan troglodytes]
gi|410219010|gb|JAA06724.1| death associated protein 3 [Pan troglodytes]
gi|410260694|gb|JAA18313.1| death associated protein 3 [Pan troglodytes]
gi|410260696|gb|JAA18314.1| death associated protein 3 [Pan troglodytes]
gi|410260698|gb|JAA18315.1| death associated protein 3 [Pan troglodytes]
gi|410260700|gb|JAA18316.1| death associated protein 3 [Pan troglodytes]
gi|410293150|gb|JAA25175.1| death associated protein 3 [Pan troglodytes]
gi|410293152|gb|JAA25176.1| death associated protein 3 [Pan troglodytes]
Length = 398
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|397500896|ref|XP_003821140.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 2 [Pan
paniscus]
gi|410260702|gb|JAA18317.1| death associated protein 3 [Pan troglodytes]
gi|410293154|gb|JAA25177.1| death associated protein 3 [Pan troglodytes]
Length = 357
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 16 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 73
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 74 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 133
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 134 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 191
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 192 VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 250
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 251 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 310
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 311 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 356
>gi|315434216|ref|NP_001186780.1| 28S ribosomal protein S29, mitochondrial isoform 3 [Homo sapiens]
gi|119573433|gb|EAW53048.1| death associated protein 3, isoform CRA_d [Homo sapiens]
gi|194389910|dbj|BAG60471.1| unnamed protein product [Homo sapiens]
Length = 357
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 201/346 (58%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 16 AKHGDQHEGQHYNISPQDLETVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 73
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 74 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 133
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 134 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 191
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 192 VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 250
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 251 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 310
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 311 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 356
>gi|410986942|ref|XP_003999767.1| PREDICTED: 28S ribosomal protein S29, mitochondrial [Felis catus]
Length = 627
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 198/345 (57%), Gaps = 10/345 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+H +Q Y +P + +F R F+ Q + F+E+ +++R LEL+ YLK+
Sbjct: 286 ARHGEQHEGLHYNIPLQDMRTLFPHSLPPR-FSMQVKTFSEACLMVRKPALELLHYLKN- 343
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++H+P W + + S
Sbjct: 344 TNFAHPAVRYVLYGEKGTGKTLSLCHVIHFCAKQDWLILHVPDAHLWVKSCRSLLPSTYN 403
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+D +A++WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GI R
Sbjct: 404 RQRLDQPAEASIWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGIMR 461
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
VK A+D V V+ E+K S+ G R V VDG N+ + KT K EDKS V P + L
Sbjct: 462 VKNATDAVGVVLRELKGQSSLGGFRLLVAVDGVNALWG-KTTLKREDKSLVAPEELALVH 520
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW+ G IVL LS +L R+++LP +L K GF+++DPF+PI V + +
Sbjct: 521 NLRKMVKNDWHGGTIVLTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYSPK 580
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + + Y WLQ T EG++E+ FL+ P ++ C+
Sbjct: 581 EFESCIQYYLENSWLQHEKAHTEEGKKELLFLSNANPGQLERLCA 625
>gi|442753659|gb|JAA68989.1| Putative mitochondrial ribosome small subunit component mediator of
apoptosis dap3 [Ixodes ricinus]
Length = 397
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 201/355 (56%), Gaps = 16/355 (4%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
T H+KQ FYT+P +++ +IF++ T+ ++F E +++R LE+ +L++
Sbjct: 46 TNHTKQHEGLFYTVPPDIQKSIFQIFRPTKKMEVMNEMFAEFCVMVRQPFLEVKAFLENY 105
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
N++ P+ R +LYG+ G GK++ + L YA NN+L++ W W PKE + +
Sbjct: 106 -NYNLPALRIMLYGKQGSGKAVTQAHLLHYAAVNNWLILSKDWAPMWVKRPKEHTANAAD 164
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
E ++D IDAA+WL+HF+ N++ L++ LT ++ Y WS RE +E PL +I+HG+ R
Sbjct: 165 ETLIDSPIDAAVWLQHFRVLNSQLLQELNLTATETYKWSEREVTEKGEPLTNIIDHGVER 224
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+K++ D + L EIK+ + G +T V + G N+F+ + + + D S + ++ R
Sbjct: 225 IKHSCDCLGALLREIKQYTNSGRVKTLVILRGVNTFWHD-SYLRRLDGSFIPAEDFSIVR 283
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRR--------ESHLPLYMLKKAGFESIDPFVPI 292
++++DW N AIV+ + P LP R S+ P Y+L GFE +PFVP+
Sbjct: 284 HFKEVLKNDWKNAAIVVTVDP-TGLPLRHLKMDQLDVPSYYPKYLLGLKGFEFFEPFVPV 342
Query: 293 HVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSFK 342
HVP +++E + L+ Y ++++Q T EGR E+ FL+ P ++ C +
Sbjct: 343 HVPGYSEKEIESCLDYYVDRRYIQNRRGWTEEGRMELKFLSGYNPHQLARICQAR 397
>gi|119573428|gb|EAW53043.1| death associated protein 3, isoform CRA_a [Homo sapiens]
Length = 395
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 200/343 (58%), Gaps = 7/343 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLETVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ--TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKEEGKKELLFLSNANPSLLERHCAY 394
>gi|348526874|ref|XP_003450944.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like
[Oreochromis niloticus]
Length = 395
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 196/346 (56%), Gaps = 12/346 (3%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
HS++ L ++YTLP +F G+ + +Q + FNE+ I++R LE++ YLK T+
Sbjct: 54 HSEKHLGQYYTLPSAHIRTLFP-SGLPWRYQQQVKTFNEACIMVRQPSLEVISYLKK-TD 111
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+ +P+ R++ YG+ G GK+++L + + + + +L++HIP +W KE+ S
Sbjct: 112 YSKPALRYLFYGQKGTGKTISLCHTVHFCYTQGWLVLHIPDAHQWVKNCKELLPSSYNAS 171
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D + A WLR+F+ N ++L ++ T Y+W+ RE +E L L++ GI+RVK
Sbjct: 172 RFDQPLQATTWLRNFRLTNERFLS--KIKTKHRYMWTKREFTEEGSLLGELVDQGISRVK 229
Query: 183 YASDVVDVLFTEIKKLSTEGVC--RTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+SDVV + E++ S + R V VDG N + T K EDKS V P +TL
Sbjct: 230 SSSDVVGAVMKELRLQSGQPGSDFRLAVAVDGVNGLWGRST-IKKEDKSAVDPEELTLIY 288
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ L+++DW GAI+ LS +L + ++LP +L + GF+S+DPF+P+ VP +++
Sbjct: 289 NLRKLMRNDWTGGAIIATLSQTGSLYTPKSAYLPQELLGERGFDSMDPFIPVSVPNYSEK 348
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y + WLQ T EG++E+ FL+ R P + C F
Sbjct: 349 EFESCYLYYMDRHWLQHPQSRTEEGKKELVFLSNRNPSMLDRICGF 394
>gi|427786679|gb|JAA58791.1| Putative mitochondrial ribosome small subunit component mediator of
apoptosis dap3 [Rhipicephalus pulchellus]
Length = 399
Score = 216 bits (551), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 203/358 (56%), Gaps = 22/358 (6%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
T H+ KFYT+P+ V+ ++FE+ + + F +++F E SI++R LE+ Y++S
Sbjct: 48 TNHTIDHEAKFYTVPEHVQKSLFEVYKVPKKFQTLSEMFAEMSIMVRQPYLEVKSYIESY 107
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
++ P+ R +LYG+ G GK++ + L YA NN+++V W W PK+ + +
Sbjct: 108 -DYSLPALRIMLYGQMGCGKAITQAHLLHYAAVNNWIIVPKEWAAHWVKRPKDHAQNAND 166
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
E ++D IDAA+WL+ F+ N L++ LTT+Q Y WS RE ++ PL +++HG+ R
Sbjct: 167 ETLIDSPIDAAVWLQQFRVLNAARLKELNLTTTQTYNWSEREATQKGEPLTNIVDHGVER 226
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+K+A + L EIK + G +T V V G NSF+ + T + DKS + + + R
Sbjct: 227 MKHACSCMGALLQEIKMHTDSGRMKTMVIVKGVNSFW-QDTYLRRLDKSYIPAKDLVIVR 285
Query: 241 SVINLVQSDWNNGAIVLALSPRA-----------NLPDRRESHLPLYMLKKAGFESIDPF 289
+ ++++DW N AIV+++ A N+P + P Y+L GFE +PF
Sbjct: 286 AFKEILKNDWRNAAIVVSVDQAALSLKHLGFTHENVP----CYYPKYLLGLEGFEFFEPF 341
Query: 290 VPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSFK 342
+P+HVP+ +++E + L+ Y + ++Q T EG+ E+ FL+ P+++ + C ++
Sbjct: 342 IPVHVPKYSEKEIDSCLDYYLDRGYIQNPNGWTDEGKAELKFLSGYNPRELCKVCRWR 399
>gi|432908637|ref|XP_004077959.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Oryzias
latipes]
Length = 395
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 195/346 (56%), Gaps = 12/346 (3%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
S++ + +FYTLP E +F G+ + + +Q + FNE+ +++R LE + YLK +
Sbjct: 54 QSEKQIGQFYTLPAEHIRLLFP-HGLPKRYQQQVKTFNEACMMVRQPALEAISYLKK-AD 111
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+ +P+ R++ YG G GK+M+L +++ + + ++++HIP W KE+ S K
Sbjct: 112 YSKPALRYLFYGVKGSGKTMSLCHSVHFCYTQGWVVLHIPDAHLWVKNCKELMPSSYKSS 171
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D + A WLR+F+ N +L ++ Q YVW+ RE +E PL L++ G +RVK
Sbjct: 172 RFDQPLQATSWLRNFKITNEPFLS--KIKIKQRYVWTKRESTEEGRPLGELVDQGTSRVK 229
Query: 183 YASDVVDVLFTEIKKLST--EGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+SDVV + E++ S E R V VDG N+ + K+ K EDKS V P +TL
Sbjct: 230 SSSDVVAAVMKELRLQSGHPESNFRLAVAVDGVNALWG-KSTIKKEDKSAVDPEELTLVY 288
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ L+++DW GAI+ LS +L + ++LP +L + GF+S+DPF+P+ VP +++
Sbjct: 289 NLRKLLKNDWXGGAIITTLSQTGSLYTPKSAYLPQELLGERGFDSMDPFIPLSVPNYSEK 348
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y + WLQ T EG++E+ FL+ R P C F
Sbjct: 349 EFESCYLYYTERNWLQHPQSRTEEGKKELIFLSNRNPTMFDRLCGF 394
>gi|344286874|ref|XP_003415181.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 3
[Loxodonta africana]
Length = 363
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 188/314 (59%), Gaps = 9/314 (2%)
Query: 33 NEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAH 92
++ + FNE+ +++R LEL+ YLK+ TNF P+ R++LYGE G GK+++L + + +
Sbjct: 53 SDPVKTFNEACLMVRKPALELLHYLKN-TNFAHPAVRYILYGEKGTGKTLSLCHVVHFCA 111
Query: 93 ENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTT 152
+ ++L++H+P RW +++ S + +D ++A+ WL++F+ N ++L ++
Sbjct: 112 KQDWLILHVPDAHRWVKNCRDLLQSTYNKQRLDQPLEASTWLKNFRTSNERFLS--QIKV 169
Query: 153 SQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDG 212
++YVW+ RE +E PL ++E GITRV+ A+D V ++ E+++ S+ G+ V VDG
Sbjct: 170 QEKYVWNKRESTEKGSPLGDVVEQGITRVRNATDAVGIVLKELRRQSSCGIFHLLVAVDG 229
Query: 213 YNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESH 272
N+ + +T K EDKS + P + ++ +V++DWN GAIVL LS +L R ++
Sbjct: 230 VNALWG-RTTLKREDKSPIAPEELAFIYNLRKMVKNDWNGGAIVLTLSQTGSLFKPRTAY 288
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFL 327
+P +L + GF ++DPF+PI V N +EF + + Y WLQ T G +E+ FL
Sbjct: 289 MPQELLGEEGFNALDPFIPILVSNYNPKEFQSCIQYYLENNWLQHEKAHTEGGMKELLFL 348
Query: 328 TKRVPQKMYEFCSF 341
+ P ++ C++
Sbjct: 349 SNANPGQLERLCAY 362
>gi|395532135|ref|XP_003768127.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 2
[Sarcophilus harrisii]
Length = 364
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 184/311 (59%), Gaps = 9/311 (2%)
Query: 36 TQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENN 95
+ FNE+ +++R LEL+ YLK+ TNF P+ R+VLYGE G GK++ L +A+ + + +
Sbjct: 57 VKTFNEACLMVREPALELLHYLKN-TNFANPAIRYVLYGEKGTGKTLTLCHAVHFCAKQD 115
Query: 96 YLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQE 155
+L++H+P W ++ S + D + A+ WL++F+ N ++L ++ Q+
Sbjct: 116 WLILHVPDAHSWMKNCPDLLQSTYNKERYDQPVKASTWLKNFKTSNEQFLN--QIKIQQK 173
Query: 156 YVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNS 215
Y+W+ R+ E PL ++E G+TRV+ ASD V ++ E+K+ S+ G R V VDG N+
Sbjct: 174 YIWNKRDSIEEGRPLGEVVEQGLTRVRNASDAVGIVMKELKRQSSSGSFRLLVAVDGVNA 233
Query: 216 FFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPL 275
+ KT K EDKS V +TL ++ ++ +DW+ GAIV++LS +L R ++LP
Sbjct: 234 LWG-KTTLKKEDKSLVAAEELTLVHNMKKMLSNDWHGGAIVMSLSQTGSLFKPRVAYLPQ 292
Query: 276 YMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKR 330
+L K GF+ +DPFVPI V +EF + + Y +WLQ T EG++E+ FL+
Sbjct: 293 DLLGKEGFDDLDPFVPIQVYNYTPKEFESCIQYYLENRWLQHEKAHTEEGKKELLFLSNS 352
Query: 331 VPQKMYEFCSF 341
P ++ C++
Sbjct: 353 NPWQLERLCAY 363
>gi|384943824|gb|AFI35517.1| 28S ribosomal protein S29, mitochondrial isoform 1 [Macaca mulatta]
Length = 398
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 199/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + +E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTLSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCQDLLQSNYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALIH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV LS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|194379316|dbj|BAG63624.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 191/314 (60%), Gaps = 9/314 (2%)
Query: 33 NEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAH 92
N+ + F+E+ +++R LEL+ YLK+ T+F P+ R++LYGE G GK+++L + + +
Sbjct: 54 NDPVKTFSEACLMVRKPALELLHYLKN-TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCA 112
Query: 93 ENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTT 152
+ ++L++HIP+ W +++ S + D ++A+ WL++F+ N ++L ++
Sbjct: 113 KQDWLILHIPYAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTNERFLN--QIKV 170
Query: 153 SQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDG 212
++YVW+ RE +E PL ++E GITRV+ A+D V ++ E+K+ S+ G+ V VDG
Sbjct: 171 QEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGMFHLLVAVDG 230
Query: 213 YNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESH 272
N+ + +T K EDKS + P + L ++ ++++DW+ GAIV ALS +L R+++
Sbjct: 231 INALWG-RTTLKREDKSPIAPEELALVHNLRKMMKNDWHGGAIVSALSQTGSLFKPRKAY 289
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFL 327
LP +L K GF+++DPF+PI V N +EF + + Y WLQ T EG++E+ FL
Sbjct: 290 LPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEGKKELLFL 349
Query: 328 TKRVPQKMYEFCSF 341
+ P + C++
Sbjct: 350 SNANPSLLERHCAY 363
>gi|109017499|ref|XP_001113361.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 1
[Macaca mulatta]
gi|297280241|ref|XP_002801886.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 2
[Macaca mulatta]
gi|297280243|ref|XP_002801887.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 3
[Macaca mulatta]
Length = 398
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 199/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + +E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTLSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCQDLLQSNYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALIH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV LS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|297280246|ref|XP_002801888.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 4
[Macaca mulatta]
Length = 357
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 199/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + +E+ +++R LEL+ YLK+
Sbjct: 16 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTLSEACLMVRKPALELLHYLKN- 73
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 74 TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCQDLLQSNYN 133
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 134 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 191
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 192 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALIH 250
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV LS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 251 NLRKMMKNDWHGGAIVSTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 310
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 311 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 356
>gi|291397819|ref|XP_002715461.1| PREDICTED: death-associated protein 3 [Oryctolagus cuniculus]
Length = 397
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 197/346 (56%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y +P + +F G R F +Q + F E+ +++R LEL+ YLK+
Sbjct: 56 AKHGEQHEGQHYRVPLQDVKTVFPHGLPPR-FVKQVKTFGEACLMVRKPALELLHYLKN- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L+VHIP W ++ S
Sbjct: 114 TNFAHPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLIVHIPDAHLWVKNCPDLLQSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
D ++A+ WL++F+ N ++L ++ ++Y+W+ RE E PL ++E GI R
Sbjct: 174 RQRFDQPLEASTWLKNFKTTNERFLS--QIKVQEKYLWNKRESIEKGSPLGEVVEQGIAR 231
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
VK A+D V ++ E+++ S+ G+ V VDG N+ + +T + E+KS V P + L
Sbjct: 232 VKNATDAVGIVLKELRRQSSLGLFHLLVAVDGVNALWG-RTTLRKEEKSPVAPEELALIH 290
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV LS +L R ++LP +L K GF+++DPFVPI V N +
Sbjct: 291 NLRKMMKNDWHGGAIVSTLSQTGSLFKPRNAYLPQELLGKEGFDALDPFVPILVSNYNPK 350
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T G++E+ FL+ P ++ C++
Sbjct: 351 EFESCIQYYLENSWLQHEKAHTEAGKKELLFLSSANPGQLERLCAY 396
>gi|296229122|ref|XP_002760040.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 2
[Callithrix jacchus]
Length = 363
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 188/314 (59%), Gaps = 9/314 (2%)
Query: 33 NEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAH 92
N+ + F+E+ +++R LEL+ YLK+ TNF P+ R++LYGE G GK+++L + + +
Sbjct: 53 NDPVKTFSEAYLMVRKPALELLHYLKN-TNFSYPAVRYLLYGEKGTGKTLSLCHVIHFCA 111
Query: 93 ENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTT 152
+ ++L++HIP W +E+ S + D ++A+ WL++F+ N ++L ++
Sbjct: 112 KQDWLILHIPDAHLWVKNCRELLQSNYNKQRFDQPLEASSWLKNFKTTNERFLN--QIKV 169
Query: 153 SQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDG 212
++YVW+ RE +E PL ++E GITRV+ A+D V ++ E+K+ S+ G+ V VDG
Sbjct: 170 QEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGIFHLLVAVDG 229
Query: 213 YNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESH 272
N+ + +T K EDK + P + L ++ +V++DW+ GAIVL LS +L R ++
Sbjct: 230 INAVWG-RTTLKREDKRPIAPEELALVHNLRKMVKNDWHGGAIVLTLSQTGSLFKPRNAY 288
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFL 327
LP +L K GF+++DPF+PI V N +EF + + Y WLQ T EG++++ FL
Sbjct: 289 LPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAHTEEGKKQLLFL 348
Query: 328 TKRVPQKMYEFCSF 341
+ P + C++
Sbjct: 349 SNANPSLLERHCAY 362
>gi|380790073|gb|AFE66912.1| 28S ribosomal protein S29, mitochondrial isoform 1 [Macaca mulatta]
gi|383411701|gb|AFH29064.1| 28S ribosomal protein S29, mitochondrial isoform 1 [Macaca mulatta]
Length = 398
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 199/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + +E+ +++R LEL+ +LK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTLSEACLMVRKPALELLHFLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCQDLLQSNYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALIH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV LS +L R+++LP +L K GF+++DPF+PI V N +
Sbjct: 292 NLRKMMKNDWHGGAIVSTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|395845193|ref|XP_003795326.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 2
[Otolemur garnettii]
Length = 363
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 189/314 (60%), Gaps = 9/314 (2%)
Query: 33 NEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAH 92
++ + F E+ +++R +LEL+ LK+ TNF P+ R++LYGE G GK+++L + + +
Sbjct: 53 SDPVKTFGEACLMVRKPVLELLHCLKN-TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCA 111
Query: 93 ENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTT 152
+ ++L++HIP W +++ S + D ++A+ WL++F+ N +L ++
Sbjct: 112 KQDWLILHIPNAHLWVKNCQDLLQSTYNKERFDQPLEASAWLKNFKTTNEHFL--GQIKV 169
Query: 153 SQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDG 212
++YVW+ R+ +E PL ++E GITRV+ A+D V ++ E+K+ S+ G+ R V VDG
Sbjct: 170 QEKYVWNKRDSTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGIFRLLVAVDG 229
Query: 213 YNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESH 272
N+ + +T K EDKS + P + L ++ +V++DW+ GAIV LS +L R ++
Sbjct: 230 INALWG-RTTLKKEDKSLMAPEELALIHNLRKMVKNDWHGGAIVSTLSQTGSLFKPRRAY 288
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFL 327
LP +L K GF+++DPF+PI V N +EF + + Y KWLQ T EG++E+ FL
Sbjct: 289 LPQELLGKEGFDALDPFIPIQVSNYNPKEFESCIQYYLENKWLQHEKAHTEEGKKELLFL 348
Query: 328 TKRVPQKMYEFCSF 341
+ P ++ C++
Sbjct: 349 SNANPWQLERLCAY 362
>gi|209149103|gb|ACI32969.1| Mitochondrial 28S ribosomal protein S29 [Salmo salar]
Length = 395
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 192/346 (55%), Gaps = 12/346 (3%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
S+Q L ++YT+P +F G R + +Q + FNE +++R LEL+ +LK +
Sbjct: 54 QSEQHLGQYYTVPPSHFHTVFPHGLPPR-YQQQVKTFNEGCVMVRQPALELISHLKR-AD 111
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+ +P+ R++LYG G GK+M+L + + Y +L++HIP W KE+ S
Sbjct: 112 YSKPTLRYLLYGVKGSGKTMSLCHTVHYCSTQGWLVLHIPDAHLWVKNCKELLPSSYHTS 171
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D I A+ WLR+F+ N +L +L Q YVW+ RE +E PL L++ G++RVK
Sbjct: 172 RFDQPIQASNWLRNFRTTNEHFLSKIKL--RQRYVWTKRESTEEGRPLGELVDMGVSRVK 229
Query: 183 YASDVVDVLFTEIK--KLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+SDVV + E++ TEG R V VDG N + +T K EDKS V P +TL
Sbjct: 230 SSSDVVGAVLKELRLQAGGTEGGFRLAVAVDGVNGLWG-RTTLKKEDKSPVAPEELTLVH 288
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++ +DW GA++ LS +L ++LP +L + GF+S+DPFVP+ V +++
Sbjct: 289 NLRKMINNDWCGGAVIATLSQTGSLYAPSSAYLPQELLGEEGFDSMDPFVPVPVSLYSEK 348
Query: 301 EFHNLLNLYESKKWL-----QTSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y + WL QT EG++E+ FL+ + P + C+F
Sbjct: 349 EFESSYLYYLDRHWLQHPHSQTEEGKKELIFLSNKNPSVLERLCAF 394
>gi|355558544|gb|EHH15324.1| hypothetical protein EGK_01397 [Macaca mulatta]
Length = 398
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 198/346 (57%), Gaps = 10/346 (2%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + +E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTLSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCQDLLQSNYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALIH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW+ GAIV LS +L R+++LP +L K GF+++DPF+PI V +
Sbjct: 292 NLRKMMKNDWHGGAIVSTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSSYKPK 351
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 352 EFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 397
>gi|315434214|ref|NP_001186779.1| 28S ribosomal protein S29, mitochondrial isoform 2 [Homo sapiens]
gi|397500898|ref|XP_003821141.1| PREDICTED: 28S ribosomal protein S29, mitochondrial isoform 3 [Pan
paniscus]
Length = 364
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 190/314 (60%), Gaps = 9/314 (2%)
Query: 33 NEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAH 92
N+ + F+E+ +++R LEL+ YLK+ T+F P+ R++LYGE G GK+++L + + +
Sbjct: 54 NDPVKTFSEACLMVRKPALELLHYLKN-TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCA 112
Query: 93 ENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTT 152
+ ++L++HIP W +++ S + D ++A+ WL++F+ N ++L ++
Sbjct: 113 KQDWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTNERFLN--QIKV 170
Query: 153 SQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDG 212
++YVW+ RE +E PL ++E GITRV+ A+D V ++ E+K+ S+ G+ V VDG
Sbjct: 171 QEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGMFHLLVAVDG 230
Query: 213 YNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESH 272
N+ + +T K EDKS + P + L ++ ++++DW+ GAIV ALS +L R+++
Sbjct: 231 INALWG-RTTLKREDKSPIAPEELALVHNLRKMMKNDWHGGAIVSALSQTGSLFKPRKAY 289
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFL 327
LP +L K GF+++DPF+PI V N +EF + + Y WLQ T EG++E+ FL
Sbjct: 290 LPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEGKKELLFL 349
Query: 328 TKRVPQKMYEFCSF 341
+ P + C++
Sbjct: 350 SNANPSLLERHCAY 363
>gi|119573435|gb|EAW53050.1| death associated protein 3, isoform CRA_e [Homo sapiens]
Length = 310
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 189/312 (60%), Gaps = 9/312 (2%)
Query: 35 QTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHEN 94
Q + F+E+ +++R LEL+ YLK+ T+F P+ R++LYGE G GK+++L + + + +
Sbjct: 2 QVKTFSEACLMVRKPALELLHYLKN-TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQ 60
Query: 95 NYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQ 154
++L++HIP W +++ S + D ++A+ WL++F+ N ++L ++ +
Sbjct: 61 DWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTNERFLN--QIKVQE 118
Query: 155 EYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYN 214
+YVW+ RE +E PL ++E GITRV+ A+D V ++ E+K+ S+ G+ V VDG N
Sbjct: 119 KYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGMFHLLVAVDGIN 178
Query: 215 SFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLP 274
+ + +T K EDKS + P + L ++ ++++DW+ GAIV ALS +L R+++LP
Sbjct: 179 ALWG-RTTLKREDKSPIAPEELALVHNLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLP 237
Query: 275 LYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTK 329
+L K GF+++DPF+PI V N +EF + + Y WLQ T EG++E+ FL+
Sbjct: 238 QELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEGKKELLFLSN 297
Query: 330 RVPQKMYEFCSF 341
P + C++
Sbjct: 298 ANPSLLERHCAY 309
>gi|281338718|gb|EFB14302.1| hypothetical protein PANDA_018254 [Ailuropoda melanoleuca]
Length = 355
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 185/316 (58%), Gaps = 5/316 (1%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+H +Q + Y +P + F G R F Q + FNE+ +++R LEL+ YLK+
Sbjct: 42 ARHGEQHEARHYCIPLQDLRTTFPHGLPPR-FGMQVRTFNEACLMVRRPALELLRYLKN- 99
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R+VLYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 100 TNFAHPAVRYVLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSTYN 159
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 160 KQRFDQPMEASSWLKNFKTVNERFLS--QIKVQEKYVWNKRESTEKGRPLGEVVEQGLTR 217
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K S G R V VDG N+ + +T K EDKS V P + L
Sbjct: 218 VRNATDAVGIVLKELKSQSRLGAFRLLVAVDGVNALWG-RTTLKREDKSPVAPEELALVH 276
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
S+ +V++DW+ GAIVL LS +L R+++LP +L K GF+++DPF+PI V + +
Sbjct: 277 SLRKMVRNDWHGGAIVLTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILVSNYSPK 336
Query: 301 EFHNLLNLYESKKWLQ 316
EF + + Y WLQ
Sbjct: 337 EFESCIQYYLENSWLQ 352
>gi|118102186|ref|XP_422859.2| PREDICTED: 28S ribosomal protein S29, mitochondrial [Gallus gallus]
Length = 420
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 194/363 (53%), Gaps = 33/363 (9%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+HS+Q + Y++P E A+F G R F +Q + F E+ +++R LEL YLK+
Sbjct: 56 AQHSEQHEGRHYSIPLEEVKAVFPHGLPYR-FQQQIKTFQEACVMVRKPALELFTYLKN- 113
Query: 61 TNFDRPSPRFVLY-----------------------GEHGVGKSMALVYALQYAHENNYL 97
+NF P R+V+ GE G GK+M L + + + +L
Sbjct: 114 SNFAHPVVRYVICIFCLSAWWWNTDGMQAGEYRVGDGERGTGKTMTLCHVVHFCARQGWL 173
Query: 98 LVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYV 157
++HIP W KE+ S + +D + A+ WLR+F+ N +L++ + T Q+YV
Sbjct: 174 VLHIPDAHLWVKNCKELMQSSYNKERLDQPLQASFWLRNFRTTNEHFLKE--IKTQQKYV 231
Query: 158 WSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFF 217
W R+ +E PL ++E G+TRVK ASD V V+ EIK+ G R V VDG N+ +
Sbjct: 232 WGKRDSTEQGRPLGEVVEQGLTRVKNASDAVGVVLKEIKQQCCLGSFRVLVAVDGVNALW 291
Query: 218 AEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYM 277
+T K EDKS V P +TL ++ +V ++W+ GA+V LS +L +HLP +
Sbjct: 292 G-RTTLKKEDKSPVSPEELTLVYNLRKMVMNNWSGGAVVTTLSQTGSLFKPSSAHLPHEL 350
Query: 278 LKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVP 332
L K GF+++DPFVPI VP + EF + + Y +WLQ T +G+EE+ FL+ P
Sbjct: 351 LGKEGFDALDPFVPILVPNYTEREFESCYHYYLHCRWLQHEKARTEDGKEELRFLSGCNP 410
Query: 333 QKM 335
++
Sbjct: 411 WQL 413
>gi|297280248|ref|XP_002801889.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 5
[Macaca mulatta]
gi|297280250|ref|XP_002801890.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like isoform 6
[Macaca mulatta]
Length = 364
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 191/321 (59%), Gaps = 10/321 (3%)
Query: 27 GITRVF-NEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALV 85
I+R N+ + +E+ +++R LEL+ YLK+ TNF P+ R++LYGE G GK+++L
Sbjct: 47 AISRTIENDPVKTLSEACLMVRKPALELLHYLKN-TNFAYPAVRYLLYGEKGTGKTLSLC 105
Query: 86 YALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWL 145
+ + + + ++L++HIP W +++ S + D ++A+ WL++F+ N ++L
Sbjct: 106 HVIHFCAKQDWLILHIPDAHLWVKNCQDLLQSNYNKQRFDQPLEASTWLKNFKTTNERFL 165
Query: 146 EDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCR 205
++ ++YVW+ RE +E PL ++E GITRV+ A+D V ++ E+K+ S+ G+
Sbjct: 166 N--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGIFH 223
Query: 206 TFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANL 265
V VDG N+ + +T K EDKS + P + L ++ ++++DW+ GAIV LS +L
Sbjct: 224 LLVAVDGINALWG-RTTLKREDKSPIAPEELALIHNLRKMMKNDWHGGAIVSTLSQTGSL 282
Query: 266 PDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEG 320
R+++LP +L K GF+++DPF+PI V N +EF + + Y WLQ T EG
Sbjct: 283 FKPRKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEG 342
Query: 321 REEIAFLTKRVPQKMYEFCSF 341
++E+ FL+ P + C++
Sbjct: 343 KKELLFLSNANPSLLERHCAY 363
>gi|339248563|ref|XP_003373269.1| hypothetical protein Tsp_10113 [Trichinella spiralis]
gi|316970668|gb|EFV54561.1| hypothetical protein Tsp_10113 [Trichinella spiralis]
Length = 539
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 193/337 (57%), Gaps = 7/337 (2%)
Query: 10 KFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPR 69
K+Y + + V A+ + + +Q F+E ++R+ +L+LV + M N P R
Sbjct: 59 KWYRIDNSVYDALALEKALPLGYLKQVDTFSECQFILRSQLLDLVNCMSCM-NPTAPVVR 117
Query: 70 FVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNID 129
+VL+G+ G GK+ L AL +A+ N++++ H+P+ +W KEVS S K G +D+ +D
Sbjct: 118 YVLFGKFGTGKTTTLCQALHWAYMNDFIVCHVPFARKWIHNFKEVSISTWKSGRIDMPLD 177
Query: 130 AAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVD 189
AA WL F+++N + + TS++YVW R+ ++ + PL +++E GI R K+A+D V
Sbjct: 178 AAAWLEVFKRRNEARIRALGMKTSKDYVWGARDSTKCDEPLMSVVELGIARPKFATDCVG 237
Query: 190 VLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSD 249
VL E+K +T C+ FV VD NSFF + K DK+ S ++L + ++++D
Sbjct: 238 VLLKELKLNATNEKCKLFVSVDCVNSFFT-LSRVKRADKTFAEASCLSLVHAFKKMLKND 296
Query: 250 WNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLY 309
WNNG +V+ + R L R S+LPL++L + GFE ++PFVPIH+ + + E + +
Sbjct: 297 WNNGIVVVTVDSRQYLYLERPSYLPLFLLGREGFELLEPFVPIHIEKYTEAEARSYIEYM 356
Query: 310 ESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
+K W+Q EG+ E+ L+ P + + C+F
Sbjct: 357 IAKNWIQHEKARREEGQLELMHLSDFNPLLLDKLCAF 393
>gi|148922922|ref|NP_001092207.1| 28S ribosomal protein S29, mitochondrial [Danio rerio]
gi|148744441|gb|AAI42901.1| Dap3 protein [Danio rerio]
Length = 402
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 194/351 (55%), Gaps = 15/351 (4%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
T HS+ ++YTLP +F G R F Q + FNE +++R LEL+ YLK
Sbjct: 56 TCHSETHTGQYYTLPPTHIQKLFPHGLPPR-FQMQVKTFNEGCVMVRPAALELISYLKK- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
++++P R+VLYG+ G GKS++L + L Y + +L++H+P W KE+ S
Sbjct: 114 ADYNKPPLRYVLYGQTGSGKSISLCHTLHYCYTQGWLILHVPDAHLWVKNCKEMLPSTYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
D + A WL+ F+ N +L ++ T++ YVW+ RE +E L LI+ G+ R
Sbjct: 174 PLRFDQPVQATQWLKDFKITNEHFLS--KIKTTRRYVWTKRESTEEGRTLGELIDQGVNR 231
Query: 181 VKYASDVVDVLFTEIK---KLSTEG--VCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSR 235
+K +SDVV + E++ +TEG V + V VDG N+ + T K ED++ P
Sbjct: 232 MKSSSDVVGAVLRELRLQAGATTEGEEVFKLAVAVDGVNALWG-NTTLKKEDRTMCEPEE 290
Query: 236 VTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVP 295
+TL ++ ++++DW GAI+ ALS +L R ++LP +L + GF+ ++PFVP+ V
Sbjct: 291 LTLIHNLRKMMKTDWRGGAILTALSQTGSLFKPRSAYLPSELLGEEGFDEMEPFVPVCVS 350
Query: 296 ELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
N++EF + Y + WLQ + EG++E+ FL+ R P + C+F
Sbjct: 351 GYNEKEFGSCYLYYLDRNWLQHPRSRSEEGKKELIFLSNRNPSILERLCAF 401
>gi|387017130|gb|AFJ50683.1| 28S ribosomal protein S29, mitochondrial-like [Crotalus adamanteus]
Length = 394
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 187/347 (53%), Gaps = 13/347 (3%)
Query: 1 TKHSKQDLYKFYTL-PDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKS 59
KH + + ++YTL +EVR+ + G+ F Q + FNE+ I+IR LEL+ YLK
Sbjct: 54 AKHGEDHIGRYYTLSAEEVRTMLPH--GLPARFKLQMKTFNEACIMIRQPALELISYLKH 111
Query: 60 MTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLT 119
TN P+ R++LYGE GK+M L +A+ Y N+++VHIP V W KE+ S
Sbjct: 112 -TNLAHPAVRYLLYGEKSTGKTMVLCHAVHYCARQNWVIVHIPDVHLWVKNCKELLPSSY 170
Query: 120 KEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGIT 179
+D ++AA WL++F+ N K L ++ T Q+YVW R+ +E L L + G+
Sbjct: 171 NPERLDQPMEAANWLKNFRITNEKIL--AQIKTQQKYVWGKRDVTEEGCSLIDLTDKGLA 228
Query: 180 RVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLT 239
VKYASD + V+ E+K+ S +G R V VDG NS + KT K +K V +TL
Sbjct: 229 WVKYASDTIGVILKELKQQSCQGSFRLLVAVDGINSLWG-KTALK-HNKQNVSVEELTLI 286
Query: 240 RSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELND 299
++ +V +DW GA+V LS R +LP +L + GF +++PFVPI V + D
Sbjct: 287 HNLRKMVANDWTGGAVVATLSQTGAPSTLRHFYLPHELLGRDGFTALEPFVPIQVRDYTD 346
Query: 300 EEFHNLLNLYESKKWL-----QTSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y +KWL T EGR E+ FL+ P +F
Sbjct: 347 LEFESCYQYYLERKWLGHEKAGTKEGRLELRFLSGCNPGLFERISAF 393
>gi|47225361|emb|CAG11844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 338
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 185/336 (55%), Gaps = 13/336 (3%)
Query: 13 TLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVL 72
+LP + S +F LG + R + Q + FNE+ I++R+ LE++ YLK N RP+ R++
Sbjct: 8 SLPAHIHS-LFPLG-LPRRYQRQIKTFNEACIMVRSPALEVISYLKKTDN-TRPAVRYLF 64
Query: 73 YGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAM 132
YG G GK+M+L + + + + +L++HIP W KE+ S D + A
Sbjct: 65 YGLKGSGKTMSLCHVVHFCYTQGWLVLHIPDAHIWVKNCKELLPSSYNRARFDQPLQANE 124
Query: 133 WLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLF 192
WLR+F+ N K+L + T YVW+ RE + L L++ GI R+K +SDVV +
Sbjct: 125 WLRNFKTTNEKFLST--IKTKHRYVWTKRESTNEGSTLGELVDQGINRMKSSSDVVAAVM 182
Query: 193 TEIKKLST--EGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDW 250
E++ S E R V VDG N+ + T K EDKS V P +TL ++ L+++DW
Sbjct: 183 KELRLQSGQPESNFRLAVAVDGVNALWGRST-IKKEDKSFVDPEELTLVYNLRKLMRNDW 241
Query: 251 NNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYE 310
GAI+ LS +L R +LP +L + GF+++DPFVP+ VP +++EF + Y
Sbjct: 242 AGGAIITTLSQTGSLYTSRAEYLPQELLGEMGFDNMDPFVPVSVPNYSEKEFESCYLYYT 301
Query: 311 SKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
+ WLQ T +G++E+ FL+ R P C+F
Sbjct: 302 DRHWLQHPQSLTEDGKKELIFLSNRNPSVFERLCAF 337
>gi|397776450|gb|AFO64923.1| mitochondrial 28S ribosomal protein S29 [Oplegnathus fasciatus]
Length = 395
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 194/346 (56%), Gaps = 12/346 (3%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
S++ + ++YTLP +F G R + +Q + FNE+ +++R LE++ LK T+
Sbjct: 54 QSEKHMGQYYTLPSAHIRTLFPHGLPWR-YQQQVKTFNEACVMVRPPALEVISCLKK-TD 111
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
+P+ R++ YG G GK+M+L + + + + +L++HIP W KE+ S
Sbjct: 112 TSKPAVRYLFYGLKGSGKTMSLCHTVHFCYTQGWLVLHIPDAHLWVKNCKELLPSSYNTS 171
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D + A WLR+F+ N +L ++ T Q YVW+ RE +E L L++ GI+RVK
Sbjct: 172 RFDQPLQATEWLRNFRITNEHFLS--KIKTKQRYVWTKREFTEEGSLLGELVDQGISRVK 229
Query: 183 YASDVVDVLFTEIKKLST--EGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+SDVV + E++ S E R V VDG N+ + T K E+KS V P +TL
Sbjct: 230 SSSDVVGAVMKELRLQSGQPESDFRLAVAVDGVNALWGRST-IKKENKSAVDPEELTLVY 288
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ L++++W GAI+ L+ +L + ++LP +L + GF+S+DPF+P+ VP +++
Sbjct: 289 NLRKLMKNNWTGGAIITTLAQTGSLYTSKSAYLPQELLGERGFDSMDPFIPVSVPNYSEK 348
Query: 301 EFHNLLNLYESKKWL-----QTSEGREEIAFLTKRVPQKMYEFCSF 341
EF + Y ++WL QT EG++E+ FL+ R P + C+F
Sbjct: 349 EFESCYLYYMDRRWLQHPQSQTEEGKKELIFLSNRNPSMLDRICAF 394
>gi|119573431|gb|EAW53046.1| death associated protein 3, isoform CRA_c [Homo sapiens]
Length = 386
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 201/375 (53%), Gaps = 39/375 (10%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 16 AKHGDQHEGQHYNISPQDLETVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 73
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 74 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 133
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 134 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 191
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 192 VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 250
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKA------------------- 281
++ ++++DW+ GAIV ALS +L R+++LP +L K
Sbjct: 251 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKGFTTWPRLVWNSWAQAICPS 310
Query: 282 ----------GFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAF 326
GF+++DPF+PI V N +EF + + Y WLQ T EG++E+ F
Sbjct: 311 QPPKVLGLQEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEGKKELLF 370
Query: 327 LTKRVPQKMYEFCSF 341
L+ P + C++
Sbjct: 371 LSNANPSLLERHCAY 385
>gi|410905697|ref|XP_003966328.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Takifugu
rubripes]
Length = 395
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 191/345 (55%), Gaps = 12/345 (3%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
S++ + ++YTLP +F G+ R + Q + FNE+ +++R+ LE++ YLK T+
Sbjct: 54 QSEKHIGQYYTLPSAHIHTMFP-HGLPRRYQLQIKTFNEACMMVRSPALEVISYLKK-TD 111
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
P+ R++ YG G GK+M+L + + + + +L++H+P W KE+ S
Sbjct: 112 DRNPAVRYLFYGLKGSGKTMSLCHVVHFCYTQGWLVLHVPDAHIWVKNCKELLPSSYNNA 171
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D + A WLR+F+ N +L ++ T YVW+ RE +E L L++ GI+R+K
Sbjct: 172 RFDQPLQATDWLRNFRTTNENFLS--KIKTKHRYVWTKRESTEEGSTLRELVDQGISRMK 229
Query: 183 YASDVVDVLFTEIKKLST--EGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+SDVV + E++ S E R V VDG N+ + T K EDKS V P +TL
Sbjct: 230 SSSDVVGAVMKELRLQSGQPESNFRLAVAVDGVNALWGRST-IKKEDKSFVDPEVLTLVY 288
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ L+++DW GAIV +S +L R+ +LP +L + GF+++DPF+P+ VP +++
Sbjct: 289 NLRKLMKNDWAGGAIVTTMSQTGSLYTSRDQYLPQELLGEKGFDNMDPFIPVSVPNYSEK 348
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y + WLQ T +G++E+ FL+ R P C+
Sbjct: 349 EFESCYLYYNDRHWLQHPQSLTEDGKKELIFLSNRNPYTFERICA 393
>gi|148683296|gb|EDL15243.1| death associated protein 3, isoform CRA_b [Mus musculus]
Length = 393
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 185/345 (53%), Gaps = 40/345 (11%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 82 AKHGEQHEGQHYSIPLQDLKTVFPHGLPPR-YMMQVKTFGEACLMVRKPALELLGYLKN- 139
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + +++L++HIP W +E+ S
Sbjct: 140 TNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCARHDWLILHIPDAHLWVKNCRELLQSTHN 199
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 200 KQRFDQPLEASTWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTR 257
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V V+ E+K S G+ V VDG N+ + +T K ED++ + P ++L
Sbjct: 258 VRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWG-RTTLKKEDRTLIAPEELSLVH 316
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW GF +++PF+PI +P N +
Sbjct: 317 NLRKMVKNDWE------------------------------GFNALEPFLPILIPNYNPK 346
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P+++ C+
Sbjct: 347 EFESSFQYYLENNWLQHEKASTEEGRKELRFLSNCNPEQLERLCA 391
>gi|256985205|ref|NP_001158005.1| 28S ribosomal protein S29, mitochondrial isoform 1 [Mus musculus]
gi|26354086|dbj|BAC40673.1| unnamed protein product [Mus musculus]
Length = 366
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 185/345 (53%), Gaps = 40/345 (11%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH +Q + Y++P + +F G R + Q + F E+ +++R LEL+GYLK+
Sbjct: 55 AKHGEQHEGQHYSIPLQDLKTVFPHGLPPR-YMMQVKTFGEACLMVRKPALELLGYLKN- 112
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L +A+ + +++L++HIP W +E+ S
Sbjct: 113 TNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCARHDWLILHIPDAHLWVKNCRELLQSTHN 172
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TR
Sbjct: 173 KQRFDQPLEASTWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTR 230
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V V+ E+K S G+ V VDG N+ + +T K ED++ + P ++L
Sbjct: 231 VRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWG-RTTLKKEDRTLIAPEELSLVH 289
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ +V++DW GF +++PF+PI +P N +
Sbjct: 290 NLRKMVKNDWE------------------------------GFNALEPFLPILIPNYNPK 319
Query: 301 EFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
EF + Y WLQ T EGR+E+ FL+ P+++ C+
Sbjct: 320 EFESSFQYYLENNWLQHEKASTEEGRKELRFLSNCNPEQLERLCA 364
>gi|603764|gb|AAA57443.1| ionizing radiation resistance conferring protein [Homo sapiens]
Length = 382
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 176/294 (59%), Gaps = 5/294 (1%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + F+E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLETVFPHGLPPR-FVMQVKTFSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
T+F P+ R++LYGE G GK+++L + + + + ++L++HIP W +++ S
Sbjct: 115 TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHLWVKNCRDLLQSSYN 174
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E GITR
Sbjct: 175 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITR 232
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 233 VRNATDAVGIVLKELKRQSSLGMFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVH 291
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHV 294
++ ++++DW+ GAIV ALS +L R+++LP +L K GF+++DPF+PI V
Sbjct: 292 NLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPILV 345
>gi|391340565|ref|XP_003744610.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like
[Metaseiulus occidentalis]
Length = 409
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 194/354 (54%), Gaps = 16/354 (4%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+KH +Q L KFYT+P + ++F + T+ + E +++R LE+ Y++S
Sbjct: 58 SKHQRQHLAKFYTVPKSIERSLFGIFQHTKQSRQLNSFMGEMGVMVREPFLEIREYIESY 117
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
++ +P+ R V+YG+ GVGKS L + L YA EN++L++ W+ W PK+ +
Sbjct: 118 -DYSQPALRMVVYGKLGVGKSFILGHTLHYAVENSWLVIANSWMPEWLKRPKDTQPNAED 176
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+++ ++ A+WL+HF+ N + LE +L T+ + +S E PL L+ HGI R
Sbjct: 177 PTILETPVEGAIWLQHFRAINERLLEKLQLKTTSTWKFSDTEVIAEGEPLIKLVAHGIDR 236
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSR-VTLT 239
+K+++ V L E+KK + EG +T V + G N + +T+ + K + +P+R L
Sbjct: 237 MKHSNQCVRSLLHEVKKQTNEGKTKTMVVLGGVNCLW--ETSYVKDPKKQFIPARNFHLL 294
Query: 240 RSVINLVQSDWNNG-AIVLALSPRANLPDRR------ESHLPLYMLKKAGFESIDPFVPI 292
+S ++++DW N A+V +P +L R S++P Y+L K GFE +PFVPI
Sbjct: 295 QSFKEILKNDWKNASAVVSVAAPALSLTHRNLELETVPSYMPQYLLGKEGFEFFEPFVPI 354
Query: 293 HVPELNDEEFHNLLNLYESKKWLQTSEGREEIA-----FLTKRVPQKMYEFCSF 341
V + +D+E ++L Y ++Q +GR E A FL+ R P+++ C +
Sbjct: 355 RVEKYSDKEAESVLEYYTDMNFIQHPKGRTEAARNELKFLSGRNPRELRGLCGW 408
>gi|443683309|gb|ELT87608.1| hypothetical protein CAPTEDRAFT_179880 [Capitella teleta]
Length = 417
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 175/310 (56%), Gaps = 10/310 (3%)
Query: 37 QIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNY 96
+ FNES +++R +E++ +++ ++ P+ R++LYG G GKS L + + + ++
Sbjct: 104 RAFNESCLMVRRPAIEIMECMRA-ADYSLPAIRYMLYGRAGSGKSSTLAHLMHFCGSQDW 162
Query: 97 LLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEY 156
++ H+PW Y KE S KEG +D DAA WL N L+ L T ++Y
Sbjct: 163 VITHVPWAPVLHRYSKERVPSTFKEGRIDQPADAAKWLSRLMTTNDPLLKTLNLKTHRKY 222
Query: 157 VWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSF 216
+WS RE +E L LI+ G+ RVKYA DV+ + E+K ++ G + V +DG N
Sbjct: 223 IWSRREVTEEGDALTELIDFGLQRVKYAPDVMGAVIRELKLHASSGNVKVLVAIDGVNGM 282
Query: 217 FAEKTNCKPEDKSKVLPSR-VTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRE---SH 272
+ + + E + K ++ +T+ + ++ +++DW GA V + A + + + S+
Sbjct: 283 WEQTRYIREESRHKFFHAQELTIVQHLMEFLKNDWTGGASVCTVDEGATIKEMNDPLTSY 342
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFL 327
+P ++L + GF+ +DPF+P+HVP+ +D+E ++ L+ Y +KW+Q T GR E+ FL
Sbjct: 343 MPRFLLGQKGFDFLDPFIPVHVPDYSDKEANSCLDYYTDRKWIQHPAGLTEAGRTEMFFL 402
Query: 328 TKRVPQKMYE 337
+ + P ++Y+
Sbjct: 403 SCKNPLELYK 412
>gi|449490015|ref|XP_002192580.2| PREDICTED: uncharacterized protein LOC100226911 [Taeniopygia
guttata]
Length = 830
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 160/280 (57%), Gaps = 5/280 (1%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH++Q + Y +P E A+F G + F +Q Q FNE+ +++R LE++ YLK
Sbjct: 53 AKHTEQHEGRLYNIPLEEVKAVFPHG-LPHRFQQQIQTFNEARVMVRKPALEILAYLKG- 110
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
+NF P+ R+V+YGE G GK+M L + + Y +L++H+P W KE+ S
Sbjct: 111 SNFAHPAVRYVIYGERGTGKTMTLCHVVHYCSRQGWLVLHVPDAHLWVKNCKELFQSSYN 170
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ +D + A++WL++F+ N ++L++ + T ++Y W RE +E PL ++E G+ R
Sbjct: 171 KDRLDQPLQASVWLKNFKTSNERFLQE--IKTQKKYTWGKRESTEEGRPLREVVEQGLAR 228
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ ASD V V+ E+K+ S G R V VDG N+ + +T EDKS V P +TL
Sbjct: 229 VRSASDAVGVVLRELKQQSHRGSFRLLVAVDGVNALWG-RTTLSREDKSPVSPEELTLVH 287
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKK 280
++ +V++DWN GAIV LS +L ++ P +L K
Sbjct: 288 NLRKMVKNDWNGGAIVTTLSQTGSLFKPSSAYTPQELLGK 327
>gi|390336393|ref|XP_786479.3| PREDICTED: 28S ribosomal protein S29, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 423
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 186/344 (54%), Gaps = 10/344 (2%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H+ + L ++YT+P +F +G R +++ + F E+SI+IR +E++ ++ +
Sbjct: 82 HTARHLGQYYTIPMADVPTVFPIGYSAR-WHKLLKPFQEASIMIRKPAVEIMDVMRH-AD 139
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPK-EVSHSLTKE 121
+ P ++++YG G GK+ L + L H L+VHIP W K + S++ E
Sbjct: 140 YTNPPIKYLMYGRKGSGKTTCLNHILHSCHNQGCLIVHIPCANSWNVNNKWDFLDSVSHE 199
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
GM D ++ WL+HF+ +N +L+ ++ TS+ Y WS RE++EA PL ++++ G+ R
Sbjct: 200 GMYDQPALSSEWLKHFRSRNEHFLK--KILTSKCYEWSKREQTEAGEPLLSVVDQGLNRP 257
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRS 241
K A+DV+ V+ E++ S+ G R + V N FAE TN + + + + +
Sbjct: 258 KNATDVIGVVLKELRDQSSSGKYRLILAVKAVNGLFAEMTNVRKPGGYLIPVNELRMAYH 317
Query: 242 VINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEE 301
+++ W NGAI++ + + PL++L+K GFE +DPFVP++V +D+E
Sbjct: 318 FKKMLKGQWTNGAIIMTVDQHNCHQAPKWDFKPLHLLQKQGFEWLDPFVPVYVENYSDKE 377
Query: 302 FHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
F + + Y SK+W+Q T EG+ + L++ P C+
Sbjct: 378 FESCMQYYISKQWIQMEQAKTEEGKLHLKLLSESNPGSFERICA 421
>gi|355682609|gb|AER96966.1| death associated protein 3 [Mustela putorius furo]
Length = 250
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 151/254 (59%), Gaps = 4/254 (1%)
Query: 35 QTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHEN 94
Q + F+E+ +L+R LEL+ +L TNF P+ R+VLYGE G GK+++L + + + +
Sbjct: 1 QVKTFHEACLLVRRPALELLRHLDG-TNFAHPAVRYVLYGEKGTGKTLSLCHVIHFCAKR 59
Query: 95 NYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQ 154
++L+VH+P W + + S D ++A+ WL+ F+ N ++L ++ +
Sbjct: 60 DWLVVHVPDAHLWVKSCRGLLRSAYNRQRFDQPVEASSWLKSFKTANERFLSQIKI--QE 117
Query: 155 EYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYN 214
Y+W+ RE +E PL ++E G+TRVK A+D V ++ E+K S G R V VDG N
Sbjct: 118 TYMWNKRESTEKGRPLGEVVEXGLTRVKNATDAVGIVLKELKSQSCSGAFRLLVAVDGVN 177
Query: 215 SFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLP 274
+ + KT K EDKS + P + L S+ +V++DW+ GA+VLALS +L R ++LP
Sbjct: 178 ALWG-KTTLKREDKSLMAPEELALVHSLRKMVRNDWHGGAVVLALSQTGSLFTPRMAYLP 236
Query: 275 LYMLKKAGFESIDP 288
+L K GF+++DP
Sbjct: 237 QELLGKEGFDALDP 250
>gi|355745723|gb|EHH50348.1| hypothetical protein EGM_01162 [Macaca fascicularis]
Length = 373
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 191/341 (56%), Gaps = 25/341 (7%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH Q + Y + + +F G R F Q + +E+ +++R LEL+ YLK+
Sbjct: 57 AKHGDQHEGQHYNISPQDLKTVFPHGLPPR-FVMQVKTLSEACLMVRKPALELLHYLKN- 114
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R++LYGE G GK+++L + + + + ++L++HIP L W +++ S
Sbjct: 115 TNFAYPAVRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPAHL-WVKNCQDLLQSNYN 173
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E R
Sbjct: 174 KQRFDQPLEASTWLKNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQ---R 228
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K EDKS + P + L
Sbjct: 229 VRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALIH 287
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
++ ++++DW AIV LS +L R+++LP +L K GF+++DPF+PI
Sbjct: 288 NLRKMMKNDW---AIVSTLSQTGSLFKPRKAYLPQELLGKEGFDALDPFIPI-------- 336
Query: 301 EFHNLLNLYESKKWLQTSEGREEIAFLTKRVPQKMYEFCSF 341
L++ Y+ K+ T EG++E+ FL+ P + C++
Sbjct: 337 ----LVSSYKPKE-APTEEGKKELLFLSNANPSLLERHCAY 372
>gi|322796241|gb|EFZ18817.1| hypothetical protein SINV_14388 [Solenopsis invicta]
Length = 193
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 122/192 (63%), Gaps = 3/192 (1%)
Query: 152 TSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVD 211
T+++Y W+ RE + + P+ I+ GI R+KYA VVD L E+K ST G C+T V +D
Sbjct: 2 TTKDYTWNQREMTSQDTPILEFIDFGINRMKYACGVVDALIRELKLASTAGKCKTMVVID 61
Query: 212 GYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRES 271
G+N+F + T ++K VLP +VTL R ++L + DW NGA+VL + RAN +RRES
Sbjct: 62 GFNAFTSNHTRIYDDNKVMVLPKQVTLARPFLDLTKDDWCNGAVVLTVDARAN-KERRES 120
Query: 272 HLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ--TSEGREEIAFLTK 329
HLP Y+L K GFE +DPF+P+ V N EF +++ Y+ +KW++ T G++E+ ++
Sbjct: 121 HLPRYLLGKEGFEHLDPFIPVLVENYNIAEFDSMIEYYKDRKWIRNITPSGQKELELISN 180
Query: 330 RVPQKMYEFCSF 341
+ P + E C F
Sbjct: 181 KNPLALLEQCKF 192
>gi|114560141|ref|XP_001143071.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like, partial
[Pan troglodytes]
Length = 294
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 152/246 (61%), Gaps = 4/246 (1%)
Query: 35 QTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHEN 94
Q + F+E+ +++R LEL+ YLK+ T+F P+ R++LYGE G GK+++L + + + +
Sbjct: 25 QVKTFSEACLMVRKPALELLHYLKN-TSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQ 83
Query: 95 NYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQ 154
++L++HIP W +++ S + D ++A+ WL++F+ N ++L ++ +
Sbjct: 84 DWLILHIPDAHLWVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTNERFLN--QIKVQE 141
Query: 155 EYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYN 214
+YVW+ RE +E PL ++E GITRV+ A+D V ++ E+K+ S+ G+ V VDG N
Sbjct: 142 KYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGMFHLLVAVDGIN 201
Query: 215 SFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLP 274
+ + +T K EDKS + P + L ++ ++++DW+ GAIV ALS +L R+++LP
Sbjct: 202 ALWG-RTTLKREDKSPIAPEELALVHNLRKMMKNDWHGGAIVSALSQTGSLFKPRKAYLP 260
Query: 275 LYMLKK 280
+L K
Sbjct: 261 QELLGK 266
>gi|402856531|ref|XP_003892841.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like, partial
[Papio anubis]
Length = 294
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 154/272 (56%), Gaps = 9/272 (3%)
Query: 76 HGVGKSMAL-VYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWL 134
HG+ A+ V L A ++L++HIP W +++ S + D ++A+ WL
Sbjct: 25 HGLPPRFAMQVKTLSEACLMDWLILHIPDAHLWVKNCQDLLQSNYNKQRFDQPLEASTWL 84
Query: 135 RHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTE 194
++F+ N ++L ++ ++YVW+ RE +E PL ++E GITRV+ A+D V ++ E
Sbjct: 85 KNFKTTNERFLN--QIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAVGIVLKE 142
Query: 195 IKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGA 254
+K+ S+ G+ V VDG N+ + +T K EDKS + P + L ++ + ++DW+ GA
Sbjct: 143 LKRQSSLGIFHLLVAVDGINALWG-RTTLKREDKSPIAPEELALVHNLRKMTKNDWHGGA 201
Query: 255 IVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKW 314
IV LS +L ++++LP +L K GF+++DPF+PI V N +EF + + Y W
Sbjct: 202 IVSTLSQTGSLFKPQKAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNW 261
Query: 315 LQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
LQ T EG++E+ FL+ P + C++
Sbjct: 262 LQHEKAPTEEGKKELLFLSNANPSLLERHCAY 293
>gi|198427977|ref|XP_002131160.1| PREDICTED: similar to death-associated protein 3 [Ciona
intestinalis]
Length = 429
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 182/360 (50%), Gaps = 29/360 (8%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFEL--GGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
H+ +D+ + +P E +S++ G + F + ++ I+IR LELV YLK
Sbjct: 74 HTLKDIGLMHEIPKEDQSSLVLKYDKGFRKKFLTEASAVDKLCIMIRKPGLELVNYLKH- 132
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHI--PWVLRWFAYP------- 111
N+ R+++YG G GK+M ++YA+ Y + +L+V + PW W Y
Sbjct: 133 ANYSTAVNRYLMYGPAGCGKTMTMMYAVDYCKKQGWLIVPVFNPWT--WIQYKNTYIVHQ 190
Query: 112 -KEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPL 170
+E+ SL + VD AA WL +F++ N+ LE+ + T++EY WS EK+++ +
Sbjct: 191 REEIVRSLWNKDRVDHPEIAARWLENFRQINSDLLEN--VFTTREYTWSKHEKTKSGVSF 248
Query: 171 AALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSK 230
+ L++ GI RV+ A+DV + EI + RT VD NSFF T K E
Sbjct: 249 STLVDLGIARVRIATDVAGCILREIINQDSPDFPRTLAAVDCANSFFGIST-LKIEPGVY 307
Query: 231 VLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRE------SHLPLYMLKKAGFE 284
+ P+ + L + ++ + W NGA+++ L+ + +P + + S P +L + GF+
Sbjct: 308 LEPNELALVHNFKKILSNKWKNGAVIVGLN-TSGIPSQTKRIAKVSSEHPYDILGQEGFD 366
Query: 285 SIDPFVPIHVPELNDEEFHNLLNLYESKKWL----QTSEGREEIAFLTKRVPQKMYEFCS 340
+DP +PIHVP D+E + L Y+ +KWL T G EI + P + +C
Sbjct: 367 ILDPHIPIHVPHYTDKEAISHLAYYQDRKWLVGRSTTEAGEAEILQICGNSPTDICVYCG 426
>gi|380026494|ref|XP_003696986.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Apis
florea]
Length = 233
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 131/229 (57%), Gaps = 3/229 (1%)
Query: 113 EVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAA 172
EVS S G +DL A WL++F+ N L L T++EY WS RE + L+
Sbjct: 3 EVSESPLIPGKLDLPQLTAAWLKYFKYLNEISLSQYNLKTTKEYKWSQREVIKCGETLSN 62
Query: 173 LIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVL 232
LIE GI R K+A VV+ L E+K S G C+T V +DG+N+F + T+ E+ V
Sbjct: 63 LIEFGIERNKFACGVVNALLDELKLSSIAGKCKTLVIIDGFNAFTSTITHVCDENHKYVP 122
Query: 233 PSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPI 292
P ++++T + N+V DW NGA +L + RAN DR++S P Y+L K GFE +DPF+PI
Sbjct: 123 PEKISITSAFYNIVNYDWCNGAAILTVDKRAN-KDRKDSDYPTYLLGKKGFEHLDPFLPI 181
Query: 293 HVPELNDEEFHNLLNLYESKKWLQTSE--GREEIAFLTKRVPQKMYEFC 339
V + EEF +L Y+ +KW++ G +E+ L+ R P ++ C
Sbjct: 182 CVENYSKEEFGTILEYYKDRKWIRNISPLGIKELELLSNRHPATLWRLC 230
>gi|324518724|gb|ADY47186.1| 28S ribosomal protein S29, partial [Ascaris suum]
Length = 382
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 171/346 (49%), Gaps = 14/346 (4%)
Query: 7 DLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRP 66
D+ + Y +P+ V + + F +Q F E L R LE+V LKS+ P
Sbjct: 39 DVGRLYEVPNSVVETLAFRKILPSKFAKQVDTFGECLWLCRRPFLEVVHCLKSVRK-TAP 97
Query: 67 SPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDL 126
+ R VL+G+ G GKSM + A+ YAH +++ + + + +E+ S + G +D+
Sbjct: 98 NLRVVLWGKFGTGKSMTMHQAVHYAHSQGWVIFTVRSAMDFTRAVREIQMSSYRTGRIDV 157
Query: 127 NIDAAMWLRHFQKQNTK-WLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYAS 185
A L+ F++ N W + L TS+ Y W+ EK+ P+ ++E G++ AS
Sbjct: 158 PEQAVALLQLFKQSNAPLWKKLSDLKTSKNYEWTKIEKTAVGRPITDIVEMGLSAPFVAS 217
Query: 186 DVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINL 245
D V L E+K ++ G R +D NS F KT + D++ L +TL + L
Sbjct: 218 DCVGGLLRELKGHASAGSIRVLFAIDDANSLFG-KTLVRRADRTFALADDLTLVHHMRKL 276
Query: 246 VQSDWNNGAIVLALSPRANLPDRRES-----HLPLYMLKKAGFESIDPFVPIHVPELNDE 300
+ W+NGA +L ++ + L D R+ + PL + + GFESIDPF+PI + E
Sbjct: 277 FNASWSNGACLL-VADKKELSDARDKLTIPLNTPLELFGEQGFESIDPFIPIETGLYSKE 335
Query: 301 EFHNLLNLYESKKWLQT-----SEGREEIAFLTKRVPQKMYEFCSF 341
E +L + Y++K W+ T GR+E+ FL+ P C+F
Sbjct: 336 EMDSLYDYYKAKGWITTENGRSERGRKELKFLSAFNPYMYERLCAF 381
>gi|441635399|ref|XP_003259125.2| PREDICTED: 28S ribosomal protein S29, mitochondrial [Nomascus
leucogenys]
Length = 250
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 138/240 (57%), Gaps = 8/240 (3%)
Query: 107 WFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEA 166
W +++ S + D ++A+ WL++F+ N +L ++ ++YVW+ RE +E
Sbjct: 13 WVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTNEHFLN--QIKVQEKYVWNKRESTEK 70
Query: 167 NIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPE 226
PL ++E GITRV+ A+D V ++ E+K+ S+ G+ V VDG N+ + +T K E
Sbjct: 71 GSPLGEVVEQGITRVRNATDAVGIVLKELKRQSSLGIFHLLVAVDGINALWG-RTTLKRE 129
Query: 227 DKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESI 286
DKS + P + L ++ ++++DW+ GAIV LS +L R+++LP +L K GF+++
Sbjct: 130 DKSPIAPEELALVHNLRKMMKNDWHGGAIVSTLSQTGSLFKPRKAYLPQELLGKEGFDAL 189
Query: 287 DPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCSF 341
DPF+PI V N +EF + + Y WLQ T EG++E+ FL+ P + C++
Sbjct: 190 DPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAY 249
>gi|341888925|gb|EGT44860.1| hypothetical protein CAEBREN_00467 [Caenorhabditis brenneri]
Length = 382
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 164/321 (51%), Gaps = 14/321 (4%)
Query: 32 FNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYA 91
++Q E LIR+ M+E+ ++ + + P+ R VL+G G GK++ L A+ +A
Sbjct: 64 LSKQMDTLGELVTLIRDPMMEIASCMR-VVDKTLPALRLVLWGAFGTGKTVTLNQAVHHA 122
Query: 92 HENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTK-WLEDPRL 150
+ NN+++VH+ + KE+ S G ++ +A L++F++QN W L
Sbjct: 123 YTNNWVIVHLRSAMDLTRRVKEIEMSSFVPGRINDPSNAVAVLQNFKQQNQHVWKTLGEL 182
Query: 151 TTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCV 210
T ++Y WS E++ P+ +IE GIT ASD V LF E+++ + +G + V V
Sbjct: 183 FTERDYEWSKSERTAQGKPITEIIEMGITAPFLASDCVGALFRELRRHAKDGKLKALVAV 242
Query: 211 DGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRE 270
D NS + KT K D++ PS +TL L+ +DW NG VL ++ + + D R+
Sbjct: 243 DDANSLWG-KTLVKRADRTYAPPSDLTLVVHFRRLIANDWTNGC-VLMVADKKEVADARD 300
Query: 271 S-----HLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWL-----QTSEG 320
H PL + + GFE ++PF+PI + E + L + Y K WL +T EG
Sbjct: 301 ELGVSRHTPLELFGEEGFEFVEPFLPIETTNYTESETNTLYDYYVRKNWLASKSARTEEG 360
Query: 321 REEIAFLTKRVPQKMYEFCSF 341
R+++ L+ P C+F
Sbjct: 361 RKQLMHLSAFNPYYYERLCAF 381
>gi|74140669|dbj|BAB29240.3| unnamed protein product [Mus musculus]
Length = 272
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 129/220 (58%), Gaps = 4/220 (1%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
KH +Q + Y++P + +F G R + Q + F E+ +++R LEL+GYLK+ T
Sbjct: 56 KHGEQHEGQHYSIPLQDLKTVFPHGLPPR-YMMQVKTFGEACLMVRKPALELLGYLKN-T 113
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
NF P+ R++LYGE G GK+++L +A+ + +++L++HIP W +E+ S +
Sbjct: 114 NFAHPAVRYLLYGEKGTGKTLSLCHAVHFCARHDWLILHIPDAHLWVKNCRELLQSTHNK 173
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
D ++A+ WL++F+ N ++L ++ ++YVW+ RE +E PL ++E G+TRV
Sbjct: 174 QRFDQPLEASTWLKNFKTTNERFLS--QIKVQEKYVWNKRESTEKGSPLGEVVEQGLTRV 231
Query: 182 KYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKT 221
+ A+D V V+ E+K S G+ V VDG N+ + T
Sbjct: 232 RNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWGRTT 271
>gi|17532723|ref|NP_496280.1| Protein DAP-3 [Caenorhabditis elegans]
gi|4433400|gb|AAD20727.1| unknown [Caenorhabditis elegans]
gi|6434250|emb|CAB60994.1| Protein DAP-3 [Caenorhabditis elegans]
Length = 375
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 161/321 (50%), Gaps = 14/321 (4%)
Query: 32 FNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYA 91
++Q E LIR M E+ ++ + + P+ R VL+G G GKS+ L A+ +A
Sbjct: 57 LSKQMDTLGEVVTLIREPMAEVASCMR-VVDKSLPALRLVLWGAFGTGKSVTLNQAVHHA 115
Query: 92 HENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTK-WLEDPRL 150
+ N + +VH+ + KE+ S +G ++ ++ L++F++QN W L
Sbjct: 116 YNNKWAIVHLRSAMELTRRVKEIEMSSFVQGRINDPSNSVSILQNFKQQNQHIWKILGEL 175
Query: 151 TTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCV 210
T ++Y WS E++ P+ +IE GI+ ASD V +F E+++ + + + V +
Sbjct: 176 LTERDYEWSKSERTLKGKPITEIIEMGISAPFLASDCVGAIFRELRRHAKDDKLKVLVAI 235
Query: 211 DGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRE 270
D NS + KT K D++ PS +TL ++++DW NG VL ++ + + D R+
Sbjct: 236 DDANSLWG-KTLVKRADRTYAPPSDLTLVVHYRRMIENDWTNGC-VLMVADKKEVADARD 293
Query: 271 -----SHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWL-----QTSEG 320
H PL + + GFE ++PFVPI + E + N Y +K WL ++ EG
Sbjct: 294 HLGVSRHTPLELFGEEGFEYVEPFVPIETSNYTEAETDAIYNYYVNKNWLASKAARSEEG 353
Query: 321 REEIAFLTKRVPQKMYEFCSF 341
R+++ L+ P C+F
Sbjct: 354 RKQLMHLSAFNPYYYERLCAF 374
>gi|156379706|ref|XP_001631597.1| predicted protein [Nematostella vectensis]
gi|156218640|gb|EDO39534.1| predicted protein [Nematostella vectensis]
Length = 457
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 13/323 (4%)
Query: 11 FYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRF 70
FY++P E I + + F +Q++I S +++RN L ++ LK N P+ RF
Sbjct: 129 FYSVPQESLDNILT-HVLPKRFLKQSEILGGSYLMVRNPALSVIKKLKKQGNSQAPT-RF 186
Query: 71 VLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDA 130
VL+G+ G GK++ L + + YA + ++ +P V W + + S ++E D +A
Sbjct: 187 VLHGDAGCGKTLTLSHIVHYATSAGWFVLLVPSVFSWVHSKRGIQMSKSREDRFDQPEEA 246
Query: 131 AMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDV 190
A WLR + N +L + + SQ+Y W + ++ PL ++I+ G+ R+ YA D V V
Sbjct: 247 ASWLRTIRAINGPFLAN--MQASQQYEWGKLDSTKKGEPLISVIDQGLKRINYAPDAVGV 304
Query: 191 LFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLV--QS 248
+ EIK+ E + D YN FF KT+ K + + P ++L L+ +
Sbjct: 305 VLKEIKQ---EPGLKILYAADEYNGFFG-KTSFKDSKQKWIQPQNLSLVHHFTKLIDPKD 360
Query: 249 DWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNL 308
+ A+V ALS +R +S +L + G + P+ IHVP + E N + L
Sbjct: 361 GLKSAAMVFALSRTGIEKNRNKSSDVKELLGEEGEDVTSPYTSIHVPAFSMSELENFVRL 420
Query: 309 YESKKWLQ---TSEGREEIAFLT 328
Y+ + Q TS EIA LT
Sbjct: 421 YQQRGGFQKDLTSSLLHEIALLT 443
>gi|268532260|ref|XP_002631258.1| C. briggsae CBR-DAP-3 protein [Caenorhabditis briggsae]
Length = 343
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 160/321 (49%), Gaps = 14/321 (4%)
Query: 32 FNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYA 91
++Q E LIR + E+ ++ + + + P+ R VL+G G GK++ L A+ +A
Sbjct: 25 LSKQMDTLGEIVTLIREPIAEIASCMR-IVDKNLPNLRLVLWGAFGTGKTVTLNQAVHHA 83
Query: 92 HENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTK-WLEDPRL 150
+ N + +VH+ + KE+ S G ++ +A L++F++QN W L
Sbjct: 84 YTNKWAIVHLRSAMELTRRVKEIEMSSFVSGRINDPSNAVAILQNFKQQNQHIWKILGVL 143
Query: 151 TTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCV 210
T ++Y WS E++ P+ +IE GI+ ASD V LF E+++ + + + V +
Sbjct: 144 LTEKDYEWSKSERTLKGKPITEIIEMGISAPFLASDCVGALFRELRRHAKDDKLKVLVAI 203
Query: 211 DGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRE 270
D NS + KT K D++ PS +TL ++ +DW NG VL ++ + + D R+
Sbjct: 204 DDANSLWG-KTLVKRADRTYAPPSDLTLVVHFRRMISNDWTNGC-VLMVADKKEVADARD 261
Query: 271 S-----HLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWL-----QTSEG 320
H PL + + GFE ++PFVPI + E L N Y +K WL ++ EG
Sbjct: 262 ELGVSRHTPLELFGEEGFEFVEPFVPIETTNYTESETDALYNYYVNKNWLASKAARSEEG 321
Query: 321 REEIAFLTKRVPQKMYEFCSF 341
R+++ L+ P C+F
Sbjct: 322 RKQLMHLSAFNPYYYERLCAF 342
>gi|290562265|gb|ADD38529.1| 28S ribosomal protein S29, mitochondrial [Lepeophtheirus salmonis]
Length = 396
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 42/373 (11%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
T H K Y +P EV S + T + + F E+ +LIR+ LE+ YL++
Sbjct: 33 TNHVSSHKGKLYKIPQEVVSGV----NPTSELKDYNKTFGETHLLIRSPALEVFHYLRA- 87
Query: 61 TNFDRPSP-RFVLYGEHGVGKSMALVYALQYAHENNYLL-VHIPWVLRWFA-YPKEVSHS 117
D P VLYG G GKS L + Y+ + L+ ++ W + E++ S
Sbjct: 88 ---DIPKKLGIVLYGPRGSGKSSTLSHVGHYSIADPKLISLNFGSFKSWLVDFSGEMAQS 144
Query: 118 LTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHG 177
K G +D + L+ F+ +N + + LTT +EY+WS RE + + PL ++ G
Sbjct: 145 NHKSGRIDHITKSLEVLQEFKLRNESKISE--LTTHREYIWSARETTPVDAPLIEVLLQG 202
Query: 178 ITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSK------- 230
+ R K+++DV++VL E++ STE C+ V DG N+ F + T C E ++
Sbjct: 203 LERPKFSADVLNVLMNELRLSSTENKCKIIVLGDGINAIFNKLTACHREKLTQERIHANL 262
Query: 231 -----VLPSRVTLTRSVINLVQSDWNNGAIVLALSPR---------ANLPDRR----ESH 272
+P +++ ++ L+++ NN IV ++ + P R+ +SH
Sbjct: 263 NREFLCVPDELSVIFNLKRLLRAKSNNVTIVTSVDSHDVVRERRVERHRPTRKRPNTDSH 322
Query: 273 LPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ----TSEGREEIAFLT 328
LP +L + G++++ PF+P+ V ++EE + +++ K +++ TS GR EI FLT
Sbjct: 323 LPFTLLGEEGWKTMGPFIPVEVEFYSEEELNIMIDFKLEKDYIRSVAGTSVGRAEINFLT 382
Query: 329 KRVPQKMYEFCSF 341
+ P +C +
Sbjct: 383 GKSPLDFANYCHY 395
>gi|7495955|pir||T19244 hypothetical protein C14A4.2 - Caenorhabditis elegans
Length = 774
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 157/308 (50%), Gaps = 14/308 (4%)
Query: 32 FNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYA 91
++Q E LIR M E+ ++ + + P+ R VL+G G GKS+ L A+ +A
Sbjct: 57 LSKQMDTLGEVVTLIREPMAEVASCMR-VVDKSLPALRLVLWGAFGTGKSVTLNQAVHHA 115
Query: 92 HENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTK-WLEDPRL 150
+ N + +VH+ + KE+ S +G ++ ++ L++F++QN W L
Sbjct: 116 YNNKWAIVHLRSAMELTRRVKEIEMSSFVQGRINDPSNSVSILQNFKQQNQHIWKILGEL 175
Query: 151 TTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCV 210
T ++Y WS E++ P+ +IE GI+ ASD V +F E+++ + + + V +
Sbjct: 176 LTERDYEWSKSERTLKGKPITEIIEMGISAPFLASDCVGAIFRELRRHAKDDKLKVLVAI 235
Query: 211 DGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRE 270
D NS + KT K D++ PS +TL ++++DW NG VL ++ + + D R+
Sbjct: 236 DDANSLWG-KTLVKRADRTYAPPSDLTLVVHYRRMIENDWTNGC-VLMVADKKEVADARD 293
Query: 271 -----SHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWL-----QTSEG 320
H PL + + GFE ++PFVPI + E + N Y +K WL ++ EG
Sbjct: 294 HLGVSRHTPLELFGEEGFEYVEPFVPIETSNYTEAETDAIYNYYVNKNWLASKAARSEEG 353
Query: 321 REEIAFLT 328
R+++ L+
Sbjct: 354 RKQLMHLS 361
>gi|225709846|gb|ACO10769.1| Mitochondrial 28S ribosomal protein S29 [Caligus rogercresseyi]
Length = 405
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 173/370 (46%), Gaps = 40/370 (10%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
T HS + Y +P +V I + + T+ E+ +LIR LE+ YL++
Sbjct: 42 TSHSSSHKGRLYQVPKDVSPGI----QLPSEIQDYTKALGETHLLIRRPALEVFHYLRAN 97
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHEN-NYLLVHIPWVLRWFA-YPKEVSHSL 118
+ +L+G G GK+ L + Y E+ N + ++ +W A + E+++S
Sbjct: 98 KS---KKLAVLLFGPRGSGKTSTLSHVAHYGIEDPNLICINFGCFKKWLADFSGEIAYSS 154
Query: 119 TKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGI 178
K+G +D A L F+ +N + + L T +EY+WS RE + PL ++ GI
Sbjct: 155 FKDGRIDHISQAVEVLEEFKFRNESKISN--LLTHREYIWSARESTGEGSPLLDVLNQGI 212
Query: 179 TRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSK-------- 230
R K+++D ++VL E+ E C+ + DG NS F + T C E +
Sbjct: 213 QRPKFSADALNVLMRELLLSCNENKCKVLILGDGINSIFGQLTACHREKLIQERIHKTLY 272
Query: 231 ----VLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRR-------------ESHL 273
+P+ +++ ++ L+++ +N IV ++ + L +RR ESHL
Sbjct: 273 RDLLCVPNELSVIYNLKKLLRAKADNLNIVSSVDSASVLQERRIERHRPTRKRPSTESHL 332
Query: 274 PLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ----TSEGREEIAFLTK 329
P +L + G+ + PF+P+ V + EE +++ K++++ T GR EI F+T
Sbjct: 333 PFALLGEEGWSVMGPFIPVEVDNYSKEELDTMIDFKLEKQYIKPVAGTEAGRAEIEFITG 392
Query: 330 RVPQKMYEFC 339
+ P +C
Sbjct: 393 KSPMDFANYC 402
>gi|242001220|ref|XP_002435253.1| hypothetical protein IscW_ISCW005445 [Ixodes scapularis]
gi|215498583|gb|EEC08077.1| hypothetical protein IscW_ISCW005445 [Ixodes scapularis]
Length = 317
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 127/235 (54%), Gaps = 23/235 (9%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
T H+KQ FYT+P +++ +IF++ T+ ++F E +++R LE+ +L++
Sbjct: 46 TNHTKQHEGLFYTVPPDIQKSIFQIFRPTKKMEVMNEMFAEFCVMVRQPFLEVKAFLENY 105
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
N++ P+ R +LYG+ G GK++ + L YA NN+L+V W W PKE + +
Sbjct: 106 -NYNLPALRIMLYGKQGSGKAVTQAHLLHYAAVNNWLIVSKDWAPMWVKRPKEHTANAAD 164
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEH---- 176
E ++D IDAA+WL+HF+ N++ L++ LT ++ Y WS RE +E PL +I+H
Sbjct: 165 ETLIDSPIDAAVWLQHFRVLNSQLLQELNLTATETYKWSEREVTEKGEPLTNIIDHVSIR 224
Query: 177 -----------------GITRVKYASDVVDVLFTEIKKLSTEGVCRTF-VCVDGY 213
G+ R+K++ D + L EIK+ + G + C+D Y
Sbjct: 225 KRPICTTTLASDHFFFQGVERIKHSCDCLGALLREIKQYTNSGSEKEIESCLDYY 279
>gi|308510262|ref|XP_003117314.1| CRE-DAP-3 protein [Caenorhabditis remanei]
gi|308242228|gb|EFO86180.1| CRE-DAP-3 protein [Caenorhabditis remanei]
Length = 399
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 147/294 (50%), Gaps = 9/294 (3%)
Query: 34 EQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHE 93
+Q E L+R E+ ++ + + P+ R VL+G G GK++ L A+ +A++
Sbjct: 66 KQMDTLGEIVTLVREPTAEVASCMR-VVDKHLPNLRLVLWGAFGTGKTVTLNQAVHHAYK 124
Query: 94 NNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTK-WLEDPRLTT 152
NN+ +V++ + KE+ S G ++ +A L++F++QN W L T
Sbjct: 125 NNWAIVNLRSAMELTRRVKEIEMSSFVAGRINDPSNAVAILQNFKQQNQHVWKTLTDLLT 184
Query: 153 SQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDG 212
++Y WS E++ P+ ++E GI+ ASD V +F E+++ + + V +D
Sbjct: 185 EKDYEWSKSERTLKEKPITEIVEMGISAPFLASDCVGAIFRELRRHAKNDKLKVLVAIDD 244
Query: 213 YNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRES- 271
NS + KT K D++ PS +TL ++ +DW NG VL ++ + + D R+
Sbjct: 245 ANSLWG-KTLVKRADRTYAPPSDLTLVVHFRRMIANDWTNGC-VLMVADKKEVADARDEL 302
Query: 272 ----HLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGR 321
H PL + + GFE I+PFVPI + E + N Y SK WL + G+
Sbjct: 303 EVSRHTPLELFGEEGFEFIEPFVPIETSNYTESEADTIYNYYVSKNWLASKSGK 356
>gi|239799231|dbj|BAH70548.1| ACYPI002770 [Acyrthosiphon pisum]
Length = 203
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 100/151 (66%), Gaps = 2/151 (1%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H QD+ KFYT+ + S IF+ GG+ + F EQT +F E++++IR LE++ LKS T+
Sbjct: 37 HDSQDVSKFYTIDPKTVSNIFQTGGLPKPFTEQTNMFAETALMIRQPALEVINSLKS-TD 95
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYP-KEVSHSLTKE 121
F +P+ R++LYG+ G GKS++L + L YA+ + ++L HIP+V W Y KEV+ S +K
Sbjct: 96 FQKPAVRYLLYGQTGSGKSLSLAHILHYAYSSKFILYHIPYVPIWLKYDRKEVNWSSSKN 155
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTT 152
GM D+ + AA WL+HF QN L + LTT
Sbjct: 156 GMADIPLIAAQWLKHFVHQNGALLNELNLTT 186
>gi|170596583|ref|XP_001902819.1| Mitochondrial 28S ribosomal protein S29 [Brugia malayi]
gi|158589269|gb|EDP28333.1| Mitochondrial 28S ribosomal protein S29, putative [Brugia malayi]
Length = 354
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 151/344 (43%), Gaps = 11/344 (3%)
Query: 7 DLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRP 66
DL + Y + +E ++ + F +Q + NE L R E LK + + P
Sbjct: 12 DLGRLYQVSNEDIDTLYYRYMLPPNFRKQVETLNECVWLYRQSTFEATACLK-LVGMNIP 70
Query: 67 SPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDL 126
+ R VL+G G GKSM + + + ++L IP V+ EV S EG +D
Sbjct: 71 NLRVVLWGRWGTGKSMTAYQIIYHVWKQGWVLFTIPNVITIMRDYDEVKPSTYHEGRIDF 130
Query: 127 NIDAAMWLRHFQKQNTK-WLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYAS 185
+ LR F+ NT+ W + + Y WS E+++ P+ +++ G++ +S
Sbjct: 131 PLLGHQILRRFKLMNTRNWEKLKGCKAQKHYKWSKVEETKEGEPITNIVDIGLSAPSLSS 190
Query: 186 DVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINL 245
D V L E+ + G V +D NS + KT K ++ V P TL + L
Sbjct: 191 DCVGGLLRELTHHCSAGRFPLLVTIDHANSLYG-KTTMKDKNHKLVDPKYFTLIHHLRKL 249
Query: 246 VQSDWNNGAIVLALSPRANLPDRRESHLPLYM---LKKAGFESIDPFVPIHVPELNDEEF 302
+++DW NGA +L R R +PL L E I+PF+PI P EE
Sbjct: 250 LRNDWRNGACLLVADKREVSEARDHLTVPLETPLELFGEDIEKIEPFIPIETPLYTFEEM 309
Query: 303 HNLLNLYESKKWLQTSEGR-----EEIAFLTKRVPQKMYEFCSF 341
L + Y K W+ + GR +E+ FL+ R P C+F
Sbjct: 310 DTLYDYYLEKNWIASESGRTERAKKELKFLSGRNPYYYERICAF 353
>gi|324524987|gb|ADY48494.1| 28S ribosomal protein S29, partial [Ascaris suum]
Length = 270
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 134/271 (49%), Gaps = 13/271 (4%)
Query: 82 MALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQN 141
M + A+ YAH +++ + + + +E+ S + G +D+ A L+ F++ N
Sbjct: 1 MTMHQAVHYAHSQGWVIFTVRSAMDFTRAVREIQMSSYRTGRIDVPEQAVALLQLFKQSN 60
Query: 142 TK-WLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLST 200
W + L TS+ Y W+ EK+ P+ ++E G++ ASD V L E+K ++
Sbjct: 61 APLWKKLSDLKTSKNYEWTKIEKTAVGRPITDIVEMGLSAPFVASDCVGGLLRELKGHAS 120
Query: 201 EGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALS 260
G R +D NS F KT + D++ L +TL + L + W+NGA +L ++
Sbjct: 121 AGSIRVLFAIDDANSLFG-KTLVRRADRTFALADDLTLVHHMRKLFNASWSNGACLL-VA 178
Query: 261 PRANLPDRRES-----HLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWL 315
+ L D R+ + PL + + GFESIDPF+PI + EE +L + Y++K W+
Sbjct: 179 DKKELSDARDKLTIPLNTPLELFGEQGFESIDPFIPIETGLYSKEEMDSLYDYYKAKGWI 238
Query: 316 QT-----SEGREEIAFLTKRVPQKMYEFCSF 341
T GR+E+ FL+ P C+F
Sbjct: 239 TTENGRSERGRKELKFLSAFNPYMYERLCAF 269
>gi|226467764|emb|CAX69758.1| Mitochondrial 28S ribosomal protein S29 [Schistosoma japonicum]
Length = 421
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 161/369 (43%), Gaps = 39/369 (10%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H + KF T P+ S E + E+ + F + S+LIR L ++ L ++
Sbjct: 49 HMSSVIGKFITYPENDFSLFIE-PFLKVESTEELRTFGDLSLLIREPALSVIKDLINIRT 107
Query: 63 FDRPS------------------PRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWV 104
+ S PRFVL+G+ G G S L ++ N +L+
Sbjct: 108 LQKNSFNEEPGSSNSVLLARYSAPRFVLHGQPGTGISTTLGQITCFSGNNKWLIFPFVSC 167
Query: 105 LRWFAYPKEVS---------HSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQE 155
+++ H + +D +A WL+ F K N LE+ R S++
Sbjct: 168 EDLLEPSTDIAPSNDYHLNQHHDSSGDTLDFPARSAEWLKFFLKINRALLEELRPVISRQ 227
Query: 156 YVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCR-TFVCVDGYN 214
W+ ++ LI I R KY++D + +L E++ +S+ + +DG N
Sbjct: 228 VEWTKKDLMPEGTSWVDLISFCIARTKYSTDCIGILLREMRAISSASDGPPCLLVIDGVN 287
Query: 215 SFFAEKTNCKPEDKS---KVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRES 271
+ T K DK+ +V P R+++ + ++ DW +GAIV + + RA P RE
Sbjct: 288 FMWCRGTLLK--DKTLAVRVTPDRLSIVHHLKRALKGDWRHGAIVTSTNIRAAWPTDREK 345
Query: 272 HLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAF 326
+ P Y+L K+GFE +DPFVP+ V E LL Y WL T +GR E+ F
Sbjct: 346 YTPGYLLGKSGFECMDPFVPVLVENYTPTEIEALLRFYAENNWLTNPAAFTPDGRAELIF 405
Query: 327 LTKRVPQKM 335
L+ P ++
Sbjct: 406 LSDHNPLEL 414
>gi|226467766|emb|CAX69759.1| Mitochondrial 28S ribosomal protein S29 [Schistosoma japonicum]
Length = 421
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 161/369 (43%), Gaps = 39/369 (10%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H + KF T P+ S E + E+ + F + S+LIR L ++ L ++
Sbjct: 49 HMSSVIGKFITYPENDFSLFIE-PFLKVESTEELRTFGDLSLLIREPALSVIKDLINIRT 107
Query: 63 FDRPS------------------PRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWV 104
+ S PRFVL+G+ G G S L ++ N +L+
Sbjct: 108 LQKNSFNEEPGSSNSVLLARYSAPRFVLHGQPGTGISTTLGQITCFSGNNKWLIFPFVSC 167
Query: 105 LRWFAYPKEVS---------HSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQE 155
+++ H + +D +A WL+ F K N LE+ R S++
Sbjct: 168 EDLLEPSTDIAPSNDYHFNQHHDSSGDTLDFPARSAEWLKFFLKINRALLEELRPVISRQ 227
Query: 156 YVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCR-TFVCVDGYN 214
W+ ++ LI I R KY++D + +L E++ +S+ + +DG N
Sbjct: 228 VEWTKKDLMPEGTSWVDLISFCIARTKYSTDCIGILLREMRAISSASDGPPCLLVIDGVN 287
Query: 215 SFFAEKTNCKPEDKS---KVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRES 271
+ T K DK+ +V P R+++ + ++ DW +GAIV + + RA P RE
Sbjct: 288 FMWCRGTLLK--DKTLAVRVTPDRLSIVHHLKRALKGDWRHGAIVTSTNIRAAWPTDREK 345
Query: 272 HLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAF 326
+ P Y+L K+GFE +DPFVP+ V E LL Y WL T +GR E+ F
Sbjct: 346 YTPGYLLGKSGFECMDPFVPVLVENYTPTEIEALLRFYAENNWLTNPAAFTPDGRAELIF 405
Query: 327 LTKRVPQKM 335
L+ P ++
Sbjct: 406 LSDHNPLEL 414
>gi|449674226|ref|XP_002169182.2| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Hydra
magnipapillata]
Length = 388
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 19/347 (5%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
KHS + + + Y++P + + I + F E ++ ++ +L+R L+++ L
Sbjct: 51 KHSLKHVSQIYSIPKSIATDALSTA-IPKRFGEVSRTIDDYGMLLRKPSLQIIDNLNRNK 109
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKE--VSHSLT 119
N +++LYG G GK+M+L++ + Y +N++++VH+P R+ + V S
Sbjct: 110 N---DVKKYLLYGHDGNGKAMSLLHIIHYCLQNDWIIVHVPNGFRFIDGQTKTIVQPSTW 166
Query: 120 KEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGIT 179
D I+AA WL F K N K+L D L T+Q Y W RE +E L ++
Sbjct: 167 NNTRYDQPIEAANWLNSFSKINYKFLHD--LKTTQTYKWGKRETTEEGKSLYDVVSQAAG 224
Query: 180 RVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLT 239
R YA+D V VL EI+ + V+G N+FF KT+ K K + + +
Sbjct: 225 RNIYATDAVGVLLKEIQ---NQNKVHVLYAVNGLNAFFG-KTSHKYNGKLVEVENLGLVN 280
Query: 240 RSV-INLVQSDWNNGAIVLALSPRANLPDRR--ESHLPLYMLKKAGFESIDPFVPIHVPE 296
V + ++ G V +++ + +R +LP+ +L + GF+ + F + +
Sbjct: 281 HFVKLLKDKNKLKKGTYVTSITQTSQFSQKRVDPQNLPM-LLGEKGFDFVQDFEKLEIDN 339
Query: 297 LNDEEFHNLLNLYESKKWLQ---TSEGREEIAFLTKRVPQKMYEFCS 340
NDEE+ ++N Y K WL + + REE+ F+++ P + + C+
Sbjct: 340 YNDEEYEIMMNYYRYKHWLTRDLSVKLREEVKFMSQMNPNLVAKICA 386
>gi|389613572|dbj|BAM20122.1| mitochondrial ribosomal protein S29, partial [Papilio xuthus]
Length = 121
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 78/121 (64%)
Query: 114 VSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAAL 173
+S+S T+EG VDL +DAA WL HF+ QN L++ L S+EYVWS RE + A PLA L
Sbjct: 1 MSNSQTREGFVDLPLDAAAWLLHFKTQNQVLLKNEDLKISKEYVWSKRETTPAGAPLADL 60
Query: 174 IEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLP 233
+E GI RVK+A DV+D L EIK+LS C+TFV +DGYN FF +T V P
Sbjct: 61 VEQGIARVKFACDVIDALVYEIKQLSNNNKCKTFVAIDGYNCFFYPRTRLSTPTXKVVTP 120
Query: 234 S 234
+
Sbjct: 121 A 121
>gi|393907979|gb|EJD74852.1| PBS lyase HEAT domain-containing protein repeat-containing protein
[Loa loa]
Length = 706
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 151/350 (43%), Gaps = 11/350 (3%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
T + DL + Y + +E ++ + F +Q + NE L R LE LK +
Sbjct: 358 TALTAGDLGRLYQVSNEDIDTLYYRYMLPPKFRKQVETLNECVWLYRQPTLEATTCLK-L 416
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
+ + P+ R VL+G G GKSM + + + +++ IP V+ EV S
Sbjct: 417 VDVNIPNLRVVLWGRWGTGKSMTVFQTIYHMWRQGWIIFTIPNVITIMRDYDEVKPSTYH 476
Query: 121 EGMVDLNIDAAMWLRHFQKQNT-KWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGIT 179
EG +D + LR F+ NT W + + Y WS E+++ P+ +++ G++
Sbjct: 477 EGRIDFPLLGHQILRRFKLMNTPNWEKLKECKAQKHYKWSKVEETKEGEPITNIVDIGLS 536
Query: 180 RVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLT 239
+SD V L E+ + G V +D NS + KT K + V P TL
Sbjct: 537 APSLSSDCVGGLLRELTHHCSAGRFPLLVTIDHANSLYG-KTTMKDRNHKFVDPKYFTLI 595
Query: 240 RSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYM---LKKAGFESIDPFVPIHVPE 296
+ L+++DW NGA +L R R +PL L E I+PF+PI
Sbjct: 596 HHLRKLLRNDWTNGACLLVADKREVSDARDHLTVPLETPLELFGEDIEKIEPFIPIETSL 655
Query: 297 LNDEEFHNLLNLYESKKWLQTSEGR-----EEIAFLTKRVPQKMYEFCSF 341
EE L Y K W+ + GR +E+ FL+ R P C+F
Sbjct: 656 YTAEEMDILYGYYLEKNWIASESGRTERAKKELKFLSGRNPYYYERICAF 705
>gi|353229398|emb|CCD75569.1| hypothetical protein Smp_210450 [Schistosoma mansoni]
Length = 373
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 35/342 (10%)
Query: 34 EQTQIFNESSILIRNCMLELVGYLKSMTNFDRPS------------------PRFVLYGE 75
E+ + F + S+LIR + ++ + ++ N + S PRFVL+G+
Sbjct: 30 EELKTFGDLSLLIRKPTINMIKDVINIRNLQKESFKKEPDSSKFVALARYCVPRFVLHGQ 89
Query: 76 HGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVS------HSLTKEGMV----D 125
G G S+ L +A +++ + +++ ++ +E V D
Sbjct: 90 PGTGVSVILGQITCFAGREKWIIFPFTSCENFLEPSNDIAPSNDYHYNQHRENFVGDAFD 149
Query: 126 LNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYAS 185
+ +A WL+ F + N LE + S++ W+ ++ LI G+ R KYA+
Sbjct: 150 FPVRSAEWLKVFLQLNRPLLEKIKPVVSRQVEWTKKDIMPEGTSWVDLINFGVARTKYAT 209
Query: 186 DVVDVLFTEIKKLSTE-GVCRTFVCVDGYNSFFAEKTNCKPEDKS-KVLPSRVTLTRSVI 243
D + +L E++ LS+ G + +DG NS + T K + S V R+ + +
Sbjct: 210 DCIGILLREMRLLSSNPGGPPCLLVIDGVNSLWCRGTLLKDKTLSVNVTTDRLAIVHHLK 269
Query: 244 NLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFH 303
++ DW +G IV + + RA P RE + P Y+L K+GFE +DPF+P+ E +
Sbjct: 270 RALRGDWRHGVIVTSTNIRAAWPTDREQYTPGYLLGKSGFEYMDPFIPVLAENYTPTEIN 329
Query: 304 NLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
LL Y WL T G+ E+ FL+ P ++ +
Sbjct: 330 ALLRFYAENNWLTNPAAFTPNGQAELIFLSDYNPLELSRLAA 371
>gi|256071779|ref|XP_002572216.1| hypothetical protein [Schistosoma mansoni]
Length = 911
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 152/337 (45%), Gaps = 35/337 (10%)
Query: 34 EQTQIFNESSILIRNCMLELVGYLKSMTNFDRPS------------------PRFVLYGE 75
E+ + F + S+LIR + ++ + ++ N + S PRFVL+G+
Sbjct: 30 EELKTFGDLSLLIRKPTINMIKDVINIRNLQKESFKKEPDSSKFVALARYCVPRFVLHGQ 89
Query: 76 HGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVS------HSLTKEGMV----D 125
G G S+ L +A +++ + +++ ++ +E V D
Sbjct: 90 PGTGVSVILGQITCFAGREKWIIFPFTSCENFLEPSNDIAPSNDYHYNQHRENFVGDAFD 149
Query: 126 LNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYAS 185
+ +A WL+ F + N LE + S++ W+ ++ LI G+ R KYA+
Sbjct: 150 FPVRSAEWLKVFLQLNRPLLEKIKPVVSRQVEWTKKDIMPEGTSWVDLINFGVARTKYAT 209
Query: 186 DVVDVLFTEIKKLSTE-GVCRTFVCVDGYNSFFAEKTNCKPEDKS-KVLPSRVTLTRSVI 243
D + +L E++ LS+ G + +DG NS + T K + S V R+ + +
Sbjct: 210 DCIGILLREMRLLSSNPGGPPCLLVIDGVNSLWCRGTLLKDKTLSVNVTTDRLAIVHHLK 269
Query: 244 NLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFH 303
++ DW +G IV + + RA P RE + P Y+L K+GFE +DPF+P+ E +
Sbjct: 270 RALRGDWRHGVIVTSTNIRAAWPTDREQYTPGYLLGKSGFEYMDPFIPVLAENYTPTEIN 329
Query: 304 NLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKM 335
LL Y WL T G+ E+ FL+ P ++
Sbjct: 330 ALLRFYAENNWLTNPAAFTPNGQAELIFLSDYNPLEL 366
>gi|444721696|gb|ELW62416.1| Protein misato like protein 1 [Tupaia chinensis]
Length = 749
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 86/320 (26%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
KH + + Y++P + +F G R F Q + F E+ ++IR LEL+ YLK
Sbjct: 56 AKHGEHHEGQHYSIPLQDLQTVFPHGLPPR-FVMQMKTFGEACLMIRRPALELLQYLKH- 113
Query: 61 TNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTK 120
TNF P+ R YLL H+ W +E+ S
Sbjct: 114 TNFAHPAVR--------------------------YLLSHL-----WVKNCRELLQSTYN 142
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
+ D ++A+ WL++F+ N ++L ++ ++Y+W+ RE +E PL ++E GITR
Sbjct: 143 KQRFDQPLEASTWLKNFRTANERFLN--QIKIQEKYIWNKRESTEKGSPLGEVVEQGITR 200
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
V+ A+D V ++ E+K+ S+ G V VDG N+ + +T K EDKS
Sbjct: 201 VRNATDAVGIVLKELKRQSSSGDFHLLVAVDGVNALWG-RTTLKREDKS----------- 248
Query: 241 SVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDE 300
GF+++DPF+PI V N +
Sbjct: 249 ---------------------------------------PEGFDALDPFIPILVSNYNPK 269
Query: 301 EFHNLLNLYESKKWLQTSEG 320
EF + + Y WLQ +G
Sbjct: 270 EFESCIQYYLENDWLQHEKG 289
>gi|345316931|ref|XP_001514739.2| PREDICTED: 28S ribosomal protein S29, mitochondrial-like, partial
[Ornithorhynchus anatinus]
Length = 164
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 47 RNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLR 106
R LEL+ YLK+ F P+ R++LYGE G GK+++L +A+ + +L++H+P R
Sbjct: 4 RRPALELLRYLKA-AEFTHPAVRYLLYGEKGTGKTLSLCHAVHFCARQGWLVLHVPDAHR 62
Query: 107 WFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEA 166
W +E+ S + +D ++A+ WLRHFQ N L ++ T Q+Y W+ E +EA
Sbjct: 63 WVKNCRELLPSTFRPHRLDQPLEASTWLRHFQTVNQTLLR--QIHTQQKYTWNRWESTEA 120
Query: 167 NIPLAALIEHGITRVKYASDVVDVLFTEIKKLS 199
PLA ++E GI RVK AS + F E+K S
Sbjct: 121 GRPLAEVVEQGINRVKMASHGLGAPFKEVKNPS 153
>gi|196001487|ref|XP_002110611.1| hypothetical protein TRIADDRAFT_54798 [Trichoplax adhaerens]
gi|190586562|gb|EDV26615.1| hypothetical protein TRIADDRAFT_54798 [Trichoplax adhaerens]
Length = 351
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 144/317 (45%), Gaps = 38/317 (11%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTN 62
H + + +FYT+ + A+ + R +++ + I+IR+ ++++ LK +
Sbjct: 55 HDIEHIGQFYTVRQDDMDAVLA-KALPRRLTSFSKVIGSADIMIRDPAIDIINQLKKRSP 113
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEG 122
++P +F++ G G GK++ L + + Y + +N+ ++H+P V +W + EV S ++
Sbjct: 114 DEQP-LKFIIGGRDGTGKTVTLAHVIHYCYRSNWFILHVPSVYKWISPNCEVKRSHRRKK 172
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVK 182
D A WL+ + N + + + + + + +K LA +IE G+ + +
Sbjct: 173 FWDQIDHACEWLKLCKSINKHLIGN--MFIKETFHYGRGDKFVKGDSLAKVIEQGLLKSE 230
Query: 183 YASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSV 242
++ DVV+ + E L+T+ VD YN+FF KS V
Sbjct: 231 FSVDVVECILQE---LATQNEIPVLYAVDEYNAFFG---------KSAV----------- 267
Query: 243 INLVQSDWN----NGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELN 298
DW+ NGA V+A+S R P R + +L G + +P+ P V L
Sbjct: 268 -----QDWDKKNRNGAYVMAIS-RTGAP-RTHCYTAKQLLPGVGMKRSEPYSPKVVSNLT 320
Query: 299 DEEFHNLLNLYESKKWL 315
EE ++ Y+ K WL
Sbjct: 321 KEEVKTFIHYYKMKSWL 337
>gi|358331561|dbj|GAA50354.1| aldehyde dehydrogenase family 9 member A1-B [Clonorchis sinensis]
Length = 623
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 207 FVCVDGYNSFFAEKTNCKPEDKSKVLP---SRVTLTRSVINLVQSDWNNGAIVLALSPRA 263
V VDG N + T K DK+ P R+ + + ++++DW +GAI+ +L+ RA
Sbjct: 14 LVIVDGVNFLWCRGTLLK--DKTLHCPVTVDRLAIVHHLRRVLRADWRHGAILTSLNIRA 71
Query: 264 NLPDRRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWL-----QTS 318
P RE + P Y+L K GFE +DPF+P+ V E L Y WL T
Sbjct: 72 AWPTDREKYTPGYLLGKDGFECMDPFIPVPVENYTSAEVDACLRFYAENHWLTNPAAHTP 131
Query: 319 EGREEIAFLTKRVPQKM 335
+GR EI FL P ++
Sbjct: 132 DGRAEIIFLADSNPLEL 148
>gi|402591195|gb|EJW85125.1| hypothetical protein WUBG_03961 [Wuchereria bancrofti]
Length = 192
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 162 EKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKT 221
E+++ P+ +++ G++ +SD V L E+ + G V +D NS + KT
Sbjct: 5 EETKEGEPITNIVDIGLSAPSLSSDCVGGLLRELTHHCSAGRFPLLVTIDHANSLYG-KT 63
Query: 222 NCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYM---L 278
K ++ V P TL + L++ DW NGA +L R R +PL L
Sbjct: 64 TMKDKNHKLVDPKYFTLIHHLRKLLRIDWTNGACLLVADKREVSDARDHLTVPLETPLEL 123
Query: 279 KKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGR-----EEIAFLTKRVPQ 333
E ++PF+PI P EE L + Y K W+ + GR +E+ FL+ R P
Sbjct: 124 FGEDIEKVEPFIPIETPLYTFEEMDTLYDYYLEKNWIASESGRTERAKKELKFLSGRNPY 183
Query: 334 KMYEFCSF 341
C+F
Sbjct: 184 YYERICAF 191
>gi|260830011|ref|XP_002609955.1| hypothetical protein BRAFLDRAFT_124381 [Branchiostoma floridae]
gi|229295317|gb|EEN65965.1| hypothetical protein BRAFLDRAFT_124381 [Branchiostoma floridae]
Length = 501
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 35/170 (20%)
Query: 205 RTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLALSPRAN 264
R V VDG NS F KP D+S S ++LT ++ LV++DW GAIV A+
Sbjct: 331 RLLVAVDGVNSLFGRTVVRKP-DRSMAYASELSLTYNLRKLVRNDWRGGAIVTAVKEAGF 389
Query: 265 L------------------PD-----------RRESHLPLYMLKKAGFESIDPFVPIHVP 295
L PD R ++ P +L K GFE +DP+VP+ V
Sbjct: 390 LGMEGEKKDHRRYTRHEDHPDIYHDILDHVSARPQTFTPEALLGKEGFEYMDPYVPVLVE 449
Query: 296 ELNDEEFHNLLNLYESKKWLQ-----TSEGREEIAFLTKRVPQKMYEFCS 340
+ ++E + L+ Y + W+Q T GR+++ FL+ P + C
Sbjct: 450 KYTEKEIESCLDYYTDRMWIQNEKCWTEAGRQQLKFLSGYEPADLERICG 499
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 18/137 (13%)
Query: 3 HSKQDLYKFYTLP-DEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
H + +FYT+P DE ++ + G+ F +Q + + + N +L L+ + +
Sbjct: 90 HGLEQEAQFYTIPPDEYKTMFPQDHGMPSRFKKQGRTY-----FLLNQVLCLILNINTTD 144
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
G G GK++ L + L Y + ++++ P V W KE+ S
Sbjct: 145 ------------GIRGTGKTLCLCHVLHYCTKQGWVVLFFPKVSNWVKNVKEIQPSFHNP 192
Query: 122 GMVDLNIDAAMWLRHFQ 138
D ++A WL+ F+
Sbjct: 193 ERYDQPLEAVAWLKTFK 209
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 268 RRESHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ 316
R ++ P +L K GFE IDP+VP+ V + ++E + L+ Y + W+Q
Sbjct: 265 RPQTFTPEALLGKEGFEYIDPYVPVLVEKYTEKEIESCLDYYTDRMWIQ 313
>gi|76155687|gb|AAX26972.2| SJCHGC05091 protein [Schistosoma japonicum]
Length = 219
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 116 HSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIE 175
H + +D +A WL+ F K N LE+ R S++ W+ ++ LI
Sbjct: 50 HHDSSGDTLDFPARSAEWLKFFLKINRALLEELRPVISRQVEWTKKDLMPEGTSWVDLIS 109
Query: 176 HGITRVKYASDVVDVLFTEIKKLSTEGVC-RTFVCVDGYNSFFAEKTNCKPEDKS---KV 231
I R KY++D + +L E++ +S+ + +DG N + T K DK+ +V
Sbjct: 110 FCIARTKYSTDCIGILLREMRAISSASDGPPCLLVIDGVNFMWCRGTLLK--DKTLAVRV 167
Query: 232 LPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGF 283
P R+++ + ++ DW +GAIV + + RA P RE + P Y+L K F
Sbjct: 168 TPDRLSIVHHLKRALKGDWRHGAIVTSTNIRAAWPTDREKYTPGYLLGKIRF 219
>gi|358256265|dbj|GAA57744.1| 28S ribosomal protein S29 mitochondrial, partial [Clonorchis
sinensis]
Length = 276
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 34 EQTQIFNESSILIRNCMLELVG------YLKSMTNFDRPS-----------PRFVLYGEH 76
E+ F + S+LIR L +V L++ ++ D P PRFV YG+
Sbjct: 67 EELTTFGDYSLLIRRPSLSIVKDLLRIRELQTQSSNDTPVSDDLSLQSHAVPRFVTYGQP 126
Query: 77 GVGKSMALVYALQYAHENNYLLVHIPWVLRWF------AYPKEVSHSLTKEGMVDLNID- 129
G G S+ L +A NN+L+ P +W E K +V D
Sbjct: 127 GTGISVTLAQISHFAATNNWLVFPFPDAEKWLYRCVDLTPSNEYHQDQHKPHLVGDAFDY 186
Query: 130 ---AAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASD 186
+A WL+ F K N +LE + T+++ W+ + + A P LI+ I R KY++D
Sbjct: 187 PSRSANWLQGFVKMNEGFLEKNKPLTTRDVHWTRVDSTPAGTPWTELIKFCIARTKYSTD 246
Query: 187 VVDVLFTEIKKLSTE-GVCRTFVCVDGYN 214
+ +L E++ L ++ V VDG N
Sbjct: 247 CIGILLREMRSLCSQPDGPPCLVIVDGVN 275
>gi|313232113|emb|CBY09224.1| unnamed protein product [Oikopleura dioica]
Length = 535
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 158/432 (36%), Gaps = 111/432 (25%)
Query: 10 KFYTLPD--------------------EVRSAIFELGGITRVFNEQTQIFNESSILIRNC 49
+FYT+PD R F T++FN E+ IL R
Sbjct: 109 RFYTIPDLDIDKLSPTHSRQPFKGDLRHTRRETFHNKNATKMFNAT----GETKILRRQQ 164
Query: 50 MLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLR--- 106
+++ ++ + T F+ PS R +++GE GVGK+M+L + N L++++ + R
Sbjct: 165 ADKIIKWIDNDT-FEEPSKRVLIHGEKGVGKTMSLHQIAHHGMAKNMLVLYVGNLWRVAT 223
Query: 107 --WFAYPKEVSHSLTKEGMV-------------------------------DLNIDAAMW 133
+ P V +T +G V D A +W
Sbjct: 224 KNYATEPLNVRKDVTTQGYVSVEKRDLWESRYDPLMQQGSHRPELKSVITYDQPEPAGIW 283
Query: 134 LRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFT 193
L H + N+ L+ + T++++ S +E A L + ++R D + +
Sbjct: 284 LEHLKALNSHILQ--KYKTTRDFQLSIKETLPAGSTLLQAVNEALSRSIKRCDGIKFIIE 341
Query: 194 EIKKLSTEGV---CRTFVCVDGYNSFFA----------EKTNCKPEDKSKVLP------- 233
EIK L+ E VC+D N EK PE + LP
Sbjct: 342 EIKTLAPEMAKIGNPVLVCMDQCNYLTQGCYVVVYDDPEKIRTHPEQRG--LPHWSIRAK 399
Query: 234 --------SRVTLTRSVINLVQSDWNNGAIVLALSP-------------RANLPDRRESH 272
R+ L + +L+ DW+ G +V A + R N R E+
Sbjct: 400 FDEVVTDSRRLNLMQHFKSLLDDDWSGGFVVGATTTYQTINGNHSWKLGRHNDRSRIETE 459
Query: 273 LPLYMLKKAGFE-SIDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIAFLTKRV 331
+L GF+ S PF+P+ + +LN +E SK + E L K++
Sbjct: 460 DLHDVLGDQGFQDSWHPFIPVKLDDLNQDELDAYTQYLYSKNIIYGRTENEMSQQLIKKM 519
Query: 332 ----PQKMYEFC 339
P K ++ C
Sbjct: 520 SGGNPDKFFKLC 531
>gi|167517959|ref|XP_001743320.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778419|gb|EDQ92034.1| predicted protein [Monosiga brevicollis MX1]
Length = 359
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+HS D Y + +E + + + Q Q + L+R +++ + L
Sbjct: 72 RHSLTDANSMYIMTEE-HQKLLCTKIMKPIRRRQVQEIKSCATLVRKDVMQALNQLNKAL 130
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKE 121
+ ++P R + YG G+GK+ AL + L + + +Y ++ +W+ P V S T+
Sbjct: 131 DANQPC-RVLFYGNDGLGKTSALGHILHHYYCKSYAILPAFRTAQWYFEPNTVDISTTRP 189
Query: 122 GMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRV 181
G +DLNIDA WL F N++ L ++TT++E+ S L+ L +
Sbjct: 190 GDIDLNIDARFWLHTFNALNSELLG--QMTTTKEHTLSQDIVLPQGTALSELSDMAQQNN 247
Query: 182 KYASDVVDVLFTEI 195
+ A+D+ + E+
Sbjct: 248 RIATDLALIAINEL 261
>gi|325190894|emb|CCA25379.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 789
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 158/353 (44%), Gaps = 44/353 (12%)
Query: 7 DLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF--- 63
D KF+ L E R+A F +T+ + + I++R E++ +K+ F
Sbjct: 69 DTNKFFALTQEDRTAFFP-EAVTKRLVRAFDLIGYNHIMLRKPTAEILSVMKNWNQFTQS 127
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW-FAYPKEVSHSLTKEG 122
DRP P ++L G G GKS+AL+ + +A NN++++++P W F P + ++T
Sbjct: 128 DRP-PAYILDGARGTGKSLALLQIVHFARANNWIVLYVPRARSWCFRAPYVIPSTITPSK 186
Query: 123 MVDLNIDAAMWLRHFQK-QNTKWLEDP-------RLTTSQEYVWSPR---EKSEANIPLA 171
D+++ L+ K + + LE P R ++++ P+ + ++A + LA
Sbjct: 187 F-DIDLYGQQMLKMLAKSHHHQLLEIPLRNEYGDRYYPTEKFEQRPKTGVKTNDAPLTLA 245
Query: 172 ALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKV 231
++E GI A V L E+ ++ V + +D ++S++ + D V
Sbjct: 246 DIVEVGIREEDLACPAVVDLRAELNQVEEFPV---LIAIDEFSSWYQD--TIFGFDGKPV 300
Query: 232 LPSRVTLTRSVINLVQSDW------NNGAIVLALSPRANLPDRRESHLPLYMLKKAGFES 285
PS +++ +++++ + + NG + A + DR S + L+ +K F+
Sbjct: 301 YPSDISVVDALLDVGPNGYLEDRKLKNGLFIGATT------DRYPSKVKLW--EKINFKE 352
Query: 286 IDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIA---FLTKRVPQKM 335
I + +E ++L Y + ++L EIA +TK P K
Sbjct: 353 IRKTFGAY----GSDEMESVLAYYTAIRFLVEEMTPAEIAHFQLMTKSNPAKF 401
>gi|325190896|emb|CCA25381.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 819
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 161/358 (44%), Gaps = 44/358 (12%)
Query: 7 DLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF--- 63
D KF+ L E R+A F +T+ + + I++R E++ +K+ F
Sbjct: 69 DTNKFFALTQEDRTAFFP-EAVTKRLVRAFDLIGYNHIMLRKPTAEILSVMKNWNQFTQS 127
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW-FAYPKEVSHSLTKEG 122
DRP P ++L G G GKS+AL+ + +A NN++++++P W F P + ++T
Sbjct: 128 DRP-PAYILDGARGTGKSLALLQIVHFARANNWIVLYVPRARSWCFRAPYVIPSTITPSK 186
Query: 123 MVDLNIDAAMWLRHFQK-QNTKWLEDP-------RLTTSQEYVWSPR---EKSEANIPLA 171
D+++ L+ K + + LE P R ++++ P+ + ++A + LA
Sbjct: 187 F-DIDLYGQQMLKMLAKSHHHQLLEIPLRNEYGDRYYPTEKFEQRPKTGVKTNDAPLTLA 245
Query: 172 ALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKV 231
++E GI A V L E+ ++ V + +D ++S++ + D V
Sbjct: 246 DIVEVGIREEDLACPAVVDLRAELNQVEEFPV---LIAIDEFSSWYQD--TIFGFDGKPV 300
Query: 232 LPSRVTLTRSVINLVQSDW------NNGAIVLALSPRANLPDRRESHLPLYMLKKAGFES 285
PS +++ +++++ + + NG + A + DR S + L+ +K F+
Sbjct: 301 YPSDISVVDALLDVGPNGYLEDRKLKNGLFIGATT------DRYPSKVKLW--EKINFKE 352
Query: 286 IDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIA---FLTKRVPQKMYEFCS 340
I + +E ++L Y + ++L EIA +TK P +++ S
Sbjct: 353 IRKTFGAY----GSDEMESVLAYYTAIRFLVEEMTPAEIAHFQLMTKSNPGLVFDRAS 406
>gi|290974452|ref|XP_002669959.1| predicted protein [Naegleria gruberi]
gi|284083513|gb|EFC37215.1| predicted protein [Naegleria gruberi]
Length = 1008
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 147/348 (42%), Gaps = 32/348 (9%)
Query: 7 DLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDR- 65
D+ K + + E F + G ++ + + +L+R +L +V ++S++ +
Sbjct: 677 DVGKIFIISPEHHKKYFGVTGTGGDLDKSFEQILQRGLLVREPVLPIVNEIQSLSKNKKK 736
Query: 66 --PSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGM 123
P ++L G G GKS L + A+ N L+VHIP W V S +G
Sbjct: 737 LTTDPGYLLMGIQGSGKSACLATCVFNAYTNGVLVVHIPSAYHWTQGIHFVEPSPVLQGY 796
Query: 124 VDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKY 183
D + +L+ F NT+ L+ +L S+EY + L L ++ +
Sbjct: 797 FDAPLPTRDFLKAFMTANTEILKGMKL--SREYTLPLESGQKVPTTLYELCDYALLSDGN 854
Query: 184 ASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNC----KPEDKSKVLPSRV--- 236
S V + E L + +D YN F C +D + +P +V
Sbjct: 855 ISVVFKFVLDE---LINDKTTPMLFAIDDYN--FLHDYTCYQYGNLDDFTTTVPQKVHAK 909
Query: 237 --TLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPIHV 294
TL R++ ++Q + N IV A + + P++ +Y++++ + +
Sbjct: 910 NYTLVRALSRIIQQNAPNKLIVAANTNKNKTPNK------VYLMEENVLDPVYVSSRYSY 963
Query: 295 PELNDEEFHNLLNLYESKKWLQTSEGR--EEIAFLTKRVPQKMYEFCS 340
PEL N++ Y+S ++ ++ E++ F++ VPQ++++ S
Sbjct: 964 PEL-----ENIVEYYQSSAFVFGNKENFMEDLLFMSGGVPQRVFKHMS 1006
>gi|348664942|gb|EGZ04779.1| hypothetical protein PHYSODRAFT_566722 [Phytophthora sojae]
gi|348678353|gb|EGZ18170.1| hypothetical protein PHYSODRAFT_360631 [Phytophthora sojae]
Length = 413
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 156/355 (43%), Gaps = 43/355 (12%)
Query: 10 KFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKS-MTNFDRPSP 68
KF+ E + +F G+ R +E + I++R+ L+++ +K T + +
Sbjct: 78 KFFAFAKEQQDELFP-EGVGRRMDETFDLVGHRHIMLRDTTLKIISAMKDWETAKNESAG 136
Query: 69 RFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNI 128
+++ GE G GKS AL +QYA E+N+++++IP W V S +E D+++
Sbjct: 137 AYLIDGERGTGKSFALHQIVQYARESNWVVLYIPNPRSWCHDAPYVMQSPYQEDKFDIDV 196
Query: 129 DAAMWLRHFQKQNTKWLED--------PRLTTSQEYVWSPREKSEANIPLAAL-----IE 175
L+HF + + L R + +Y P KSEA+ AAL +
Sbjct: 197 YGVELLQHFLHCHGEQLRSIPVRGKYADRYYPTDKYESKP--KSEADYKDAALTLRDVVV 254
Query: 176 HGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSR 235
GI + A V L E+ + + V + +D YN++F +KT E K V
Sbjct: 255 SGIRDEELACQAVCDLKEELAQTTEFSV---LIAIDDYNTWF-QKTVFGYEGKD-VEADD 309
Query: 236 VTLTRSVINLVQSDWN------NGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPF 289
+++ ++ ++ ++ NG V A++ N P + ++ ++ + I
Sbjct: 310 ISVIAALKDIGAKGYDESRKLKNGLFVAAVTE--NFPTK------VHFKQQVDYRKIRAT 361
Query: 290 VPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIAF---LTKRVPQKMYEFCSF 341
+ + + EE +++ Y +L ++A+ +TK +P +++ SF
Sbjct: 362 MHTY----SAEELATVVSYYNQVSFLHDKPTDSQLAYFRLMTKSLPLHVFDRASF 412
>gi|325190892|emb|CCA25377.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 779
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 7 DLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF--- 63
D KF+ L E R+A F +T+ + + I++R E++ +K+ F
Sbjct: 69 DTNKFFALTQEDRTAFFP-EAVTKRLVRAFDLIGYNHIMLRKPTAEILSVMKNWNQFTQS 127
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW-FAYPKEVSHSLTKEG 122
DRP P ++L G G GKS+AL+ + +A NN++++++P W F P + ++T
Sbjct: 128 DRP-PAYILDGARGTGKSLALLQIVHFARANNWIVLYVPRARSWCFRAPYVIPSTITPSK 186
Query: 123 MVDLNIDAAMWLRHFQK-QNTKWLEDP-------RLTTSQEYVWSPR---EKSEANIPLA 171
D+++ L+ K + + LE P R ++++ P+ + ++A + LA
Sbjct: 187 F-DIDLYGQQMLKMLAKSHHHQLLEIPLRNEYGDRYYPTEKFEQRPKTGVKTNDAPLTLA 245
Query: 172 ALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKV 231
++E GI A V L E+ ++ V + +D ++S++ + D V
Sbjct: 246 DIVEVGIREEDLACPAVVDLRAELNQVEEFPV---LIAIDEFSSWYQD--TIFGFDGKPV 300
Query: 232 LPSRVTLTRSVINLVQSDW------NNGAIVLALSPR 262
PS +++ +++++ + + NG + A + R
Sbjct: 301 YPSDISVVDALLDVGPNGYLEDRKLKNGLFIGATTDR 337
>gi|325190895|emb|CCA25380.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 814
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 44/350 (12%)
Query: 7 DLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF--- 63
D KF+ L E R+A F +T+ + + I++R E++ +K+ F
Sbjct: 69 DTNKFFALTQEDRTAFFP-EAVTKRLVRAFDLIGYNHIMLRKPTAEILSVMKNWNQFTQS 127
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW-FAYPKEVSHSLTKEG 122
DRP P ++L G G GKS+AL+ + +A NN++++++P W F P + ++T
Sbjct: 128 DRP-PAYILDGARGTGKSLALLQIVHFARANNWIVLYVPRARSWCFRAPYVIPSTITPSK 186
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREK-----------SEANIPLA 171
D+++ L+ K + L + L + P EK ++A + LA
Sbjct: 187 F-DIDLYGQQMLKMLAKSHHHQLLEIPLRNEYGDRYYPTEKFEQRPKTGVKTNDAPLTLA 245
Query: 172 ALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKV 231
++E GI A V L E+ ++ V + +D ++S++ + D V
Sbjct: 246 DIVEVGIREEDLACPAVVDLRAELNQVEEFPV---LIAIDEFSSWYQD--TIFGFDGKPV 300
Query: 232 LPSRVTLTRSVINLVQSDW------NNGAIVLALSPRANLPDRRESHLPLYMLKKAGFES 285
PS +++ +++++ + + NG + A + DR S + L+ +K F+
Sbjct: 301 YPSDISVVDALLDVGPNGYLEDRKLKNGLFIGATT------DRYPSKVKLW--EKINFKE 352
Query: 286 IDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIA---FLTKRVP 332
I + +E ++L Y + ++L EIA +TK P
Sbjct: 353 IRKTFGAY----GSDEMESVLAYYTAIRFLVEEMTPAEIAHFQLMTKSNP 398
>gi|326426746|gb|EGD72316.1| hypothetical protein PTSG_00334 [Salpingoeca sp. ATCC 50818]
Length = 444
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 43 SILIRNCMLELVGYLKSMTNFDRPS-PRFVLYGEHGVGKSMALVYALQYAH-ENNYLLVH 100
S L+R +++ + + D+ + P+ L G+ G GKS AL Y L Y + + ++++
Sbjct: 111 SFLLRQSTMKVASIIDAQK--DKAALPQVFLIGKDGHGKSTALAY-LSYRYWKEGWVVLP 167
Query: 101 IPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSP 160
+ RW P + S K G VD DA WL F K N+ + D L T+++Y W
Sbjct: 168 VSSGARWVLEPHYIDMSTYKPGRVDSTRDAITWLNSFFKLNSDRIAD--LKTTKKYTWLE 225
Query: 161 REKSEA-NIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAE 219
+ A PL L+ + ++D+V V+ E+ L+ + + VD N F
Sbjct: 226 GSHTTAVGTPLKELLSLIEEDDRSSADIVGVIVKEL--LAAKDRPNVLLAVDDMNGLFEP 283
Query: 220 KTNCKPEDKSKVLPSRVTLTRS 241
+T+ E+ V P ++L R+
Sbjct: 284 ETSVLDENFKPVNPEDMSLVRT 305
>gi|325190893|emb|CCA25378.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 809
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 129/277 (46%), Gaps = 29/277 (10%)
Query: 7 DLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF--- 63
D KF+ L E R+A F +T+ + + I++R E++ +K+ F
Sbjct: 69 DTNKFFALTQEDRTAFFP-EAVTKRLVRAFDLIGYNHIMLRKPTAEILSVMKNWNQFTQS 127
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW-FAYPKEVSHSLTKEG 122
DRP P ++L G G GKS+AL+ + +A NN++++++P W F P + ++T
Sbjct: 128 DRP-PAYILDGARGTGKSLALLQIVHFARANNWIVLYVPRARSWCFRAPYVIPSTITPSK 186
Query: 123 MVDLNIDAAMWLRHFQK-QNTKWLEDP-------RLTTSQEYVWSPR---EKSEANIPLA 171
D+++ L+ K + + LE P R ++++ P+ + ++A + LA
Sbjct: 187 F-DIDLYGQQMLKMLAKSHHHQLLEIPLRNEYGDRYYPTEKFEQRPKTGVKTNDAPLTLA 245
Query: 172 ALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKV 231
++E GI A V L E+ ++ V + +D ++S++ + D V
Sbjct: 246 DIVEVGIREEDLACPAVVDLRAELNQVEEFPV---LIAIDEFSSWYQD--TIFGFDGKPV 300
Query: 232 LPSRVTLTRSVINLVQSDW------NNGAIVLALSPR 262
PS +++ +++++ + + NG + A + R
Sbjct: 301 YPSDISVVDALLDVGPNGYLEDRKLKNGLFIGATTDR 337
>gi|401881580|gb|EJT45878.1| carrier protein [Trichosporon asahii var. asahii CBS 2479]
Length = 458
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 140/344 (40%), Gaps = 53/344 (15%)
Query: 6 QDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDR 65
++ K +P + I G +V + T + +IR L++V L++ + D
Sbjct: 88 ENTAKLSVIPRKTFDVIQTFGLPAKVDKDLT--LGAPATVIRQATLDIVKALENGKDGDS 145
Query: 66 PSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW------FAYPKEVSHSLT 119
R+++ GE G GKSM L+ A+ YA E+ +++ + P +W FAY +E
Sbjct: 146 KEARYMITGERGAGKSMLLLQAVSYALESGWIVFYQPRASKWVNSSSQFAYNEE------ 199
Query: 120 KEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGIT 179
+ M D A L+ N K L +LT + +K E L LI+HG+
Sbjct: 200 -KMMFDQPEAATDMLQKLLSVNRKTLSKVKLTEDVVLSDATVKKGEG---LDKLIDHGL- 254
Query: 180 RVKYASD-VVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPS-RVT 237
K SD V L + LST+ +D S F +P+ K+L + +
Sbjct: 255 --KEDSDTAVATLDAVLNVLSTQTQFPVLFAIDEVQSLFCTSKYRRPD--FKLLEAYNLG 310
Query: 238 LTRSVINLVQS--DWNNGAIVLA-------------LSPRANLPDRRESHL--PL----Y 276
+ R +++L+ + GA++ A L LP RR H P+ Y
Sbjct: 311 MPRVILDLLSGAREMKRGAVLTATALSQTDVLPSDSLIKGLGLPIRRTMHAYTPIDETYY 370
Query: 277 MLKKAGFESID-PFVPIHVPELNDEEFHNLLNLYESKKWLQTSE 319
+G + ID PF ++ E + L+ K W SE
Sbjct: 371 NYANSGIKRIDVPF------GMSGHEAVAMFELFARKGWTSNSE 408
>gi|389745386|gb|EIM86567.1| hypothetical protein STEHIDRAFT_147130 [Stereum hirsutum FP-91666
SS1]
Length = 462
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 22 IFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKS 81
I + G+ + + ++ ++ ++R+ L+LV L + ++ RFVL G G GKS
Sbjct: 126 IIQTFGVPKNLVLEWRLLSKPVSVVRDMTLDLVQKLDAASSKSSEGNRFVLGGPKGSGKS 185
Query: 82 MALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQN 141
+ L+ A++YA +N+L+++IP + + L + N A L+ F+ N
Sbjct: 186 LLLLQAVEYAAASNWLVLYIPRGIDLVNSSSNYVYDLRTQSYYQPNF-AFQTLQRFKIVN 244
Query: 142 TKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTE 201
K LE L ++ E + +PLA LIE G+ A V++ + ++ L +
Sbjct: 245 AKLLEG--LKVHRDVEIERHETVKGGVPLAELIEVGVQDKTVAPTVLEAM---LECLGAQ 299
Query: 202 GVCRTFVCVDGYNSFFAEKTNCKP 225
V VD + + F + P
Sbjct: 300 TELPVLVAVDDFQALFCKSAYRDP 323
>gi|388583203|gb|EIM23505.1| hypothetical protein WALSEDRAFT_56116 [Wallemia sebi CBS 633.66]
Length = 428
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 137/300 (45%), Gaps = 33/300 (11%)
Query: 22 IFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKS 81
I + GI + E+ +IR + + L S + R+VL+G+ G G+S
Sbjct: 100 ITKFTGIPPTLAREFATEREAHTVIRKSSINAINKLDSASKTSSKDNRYVLHGKIGSGRS 159
Query: 82 MALVYALQYAHENNYLLVHIP----WVLRWFAY--PKEVSHSLTKEGMVDLNIDAAMWLR 135
++L+ ++ YA ++N+L+ +IP V +AY P E T+ + +A LR
Sbjct: 160 ISLLQSVIYAQQSNWLVFYIPKSQHLVDSSYAYNPPSESGGIWTQPSL------SAEILR 213
Query: 136 HFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEI 195
F + N + L D ++ SQ+Y ++ +A + L H A + DV+ E+
Sbjct: 214 IFAETNKEKLNDVKI--SQDY-----DQFKAGDKIYDLCIHATKYENKAVETFDVVMNEL 266
Query: 196 KKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLV--QSDWNNG 253
K + V + +D + + + T K + +K+ P +++T +++ + + +N G
Sbjct: 267 SKQTAHPV---LLAMDSIQAMY-QPTLYKDQHFNKLHPYELSVTAKILDFLSGRQQFNRG 322
Query: 254 AIVLALSPRANLPDRRESHLPLYMLKKAGFE---SIDPFVPIHVPELNDEEFHNLLNLYE 310
AI+ A S + P + +P +L + G + I+PF + LN+ L+ + E
Sbjct: 323 AILGATS---STPTTMQ--IPSLLLAQLGLQPEKPINPFEKWNTKHLNNANGLKLIEMEE 377
>gi|301092510|ref|XP_002997110.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111606|gb|EEY69658.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 404
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 157/362 (43%), Gaps = 39/362 (10%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKS- 59
++ +K KF+ E + +F G+ R ++ + I++R+ L+++ +
Sbjct: 60 SQATKAHRLKFFAFAKEQQDELFP-EGVVRRMDDTFDLLGHRHIMLRDTTLQIMSAMNDW 118
Query: 60 MTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLT 119
T+ D +++ GE G GKS AL +QYA E+N+++++IP W V S
Sbjct: 119 ETDKDDSIGAYLIDGERGTGKSFALHQIVQYARESNWVVLYIPNPRSWTNEAPYVMQSPY 178
Query: 120 KEGMVDLNIDAAMWLRHFQKQNTKWLED--------PRLTTSQEYVWSPREKS---EANI 168
++G +D+++ L+ F + + L+ R + ++ P+ S +A +
Sbjct: 179 QQGKLDIDVYGVDLLQKFLHCHGEQLKSIPLRGKYADRYYHTDKFESKPKNASDYKDAAL 238
Query: 169 PLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDK 228
L ++ G+ + A V L E+ + + V + +D YN++F T E K
Sbjct: 239 TLRDVVVGGVRDEELACQAVCDLKKELAQTTEFPV---LIAIDDYNTWF-HSTVFGYEGK 294
Query: 229 SKVLPSRVTLTRSVINLVQSDWN------NGAIVLALSPRANLPDRRESHLPLYMLKKAG 282
V +++ S+ ++ ++ NG V A++ N P + H + +
Sbjct: 295 D-VEADDISVIASLKDIGAKGYDESRKLKNGLFVAAVT--ENFPTK--VHFKQQVDYRKI 349
Query: 283 FESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIAF---LTKRVPQKMYEFC 339
++ P+ P EE +++ Y +L ++A+ +TK +P +++
Sbjct: 350 RATMRPYTP--------EELVTVVSYYNQVSFLHDKPTDSQLAYFRLMTKSLPLHVFDRA 401
Query: 340 SF 341
SF
Sbjct: 402 SF 403
>gi|392589518|gb|EIW78848.1| hypothetical protein CONPUDRAFT_106866 [Coniophora puteana
RWD-64-598 SS2]
Length = 483
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 122/303 (40%), Gaps = 51/303 (16%)
Query: 20 SAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVG 79
SA F + G+ R + ++ + + ++R L++V L R VL G+ G G
Sbjct: 129 SAPFRVFGVQRRMVLEFRLLSRACSVVRGVTLDVVDRLDKAGQEGSKGNRLVLTGDEGCG 188
Query: 80 KSMALVYALQYAHENNYLLVHIP----WVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLR 135
KS AL+ A QYA ++L+++IP V Y + +G L L+
Sbjct: 189 KSFALLQATQYAAGRDWLVLYIPRGIDLVNSSTPYVYDARTQTYLQGAFALET-----LK 243
Query: 136 HFQKQNTKWLEDPRLTTSQEYVWSPR----------------EKSEANI-----PLAALI 174
F + N L D L TS PR SE + P+ LI
Sbjct: 244 RFARANAAKLND--LVTSTPVELEPRAVLLAGLQPQGQSTNPAASEGTVLPPGTPITQLI 301
Query: 175 EHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPS 234
E G A V+D L ++ + + V + VD + + + K+ K +++ P
Sbjct: 302 EIGTREASVAPAVLDSLLEQLGQQTKRPV---LLAVDDFQAVYG-KSAYKDPHFAQIRPW 357
Query: 235 RVTLTRSVINLVQSD--WNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVPI 292
+++ R ++ + + GA++ ALS + P LPL + ES++ P
Sbjct: 358 HLSMPRLILEYASGNKTFARGAVLGALSSSPHYP------LPLELA-----ESLN--TPS 404
Query: 293 HVP 295
H P
Sbjct: 405 HAP 407
>gi|58259043|ref|XP_566934.1| mitochondrial carrier protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134106931|ref|XP_777778.1| hypothetical protein CNBA4760 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260476|gb|EAL23131.1| hypothetical protein CNBA4760 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223071|gb|AAW41115.1| mitochondrial carrier protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 437
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 134/329 (40%), Gaps = 46/329 (13%)
Query: 6 QDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDR 65
QD K + LP ++ GG V +R L+LV +++
Sbjct: 99 QDKLKSFGLPSKIDKEFASAGGPASV--------------VREATLDLVKRVEAAKTGSS 144
Query: 66 PSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVD 125
R++L GE G GKS+ LV ++ YA E+ +++++ P +W + T + + D
Sbjct: 145 KLARYILTGEQGSGKSVLLVQSVAYAIESGWIVLYSPRASKWV--------NSTSQYIYD 196
Query: 126 LNIDAAMWLRHFQKQNTKWLEDPR-----LTTSQEYVWSPREKSEANIPLAALIEHGITR 180
Q + LE R + S++ + + EA +AAL + G
Sbjct: 197 PETKTYAQWESAQNILSVLLETNRDKLSAIELSEKVELTKGKSVEAGETVAALAQLGAKD 256
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTR 240
+ A ++ + ++K + V +D S F + + D + + P ++ R
Sbjct: 257 DRSAVKALEAVVGALEKQTQFPV---LWAIDEAQSLF-NTSKYRAADYTPIEPYHLSTPR 312
Query: 241 SVINLVQS--DWNNGAIV--LALSPRANLPDR--RESHLPLYMLKKAGFESIDPF----- 289
++ + + ++ GA+V L+LS +NLP R + + +I+P+
Sbjct: 313 LALDFIAARRSFSRGAVVTSLSLSDPSNLPSPAIRSALSISSSSPLTPYTAINPYHLAHA 372
Query: 290 ---VPIHVP-ELNDEEFHNLLNLYESKKW 314
PI+VP +N EE L L+ K W
Sbjct: 373 ENLTPINVPYGMNSEEAAGLFELFTKKGW 401
>gi|336366995|gb|EGN95341.1| hypothetical protein SERLA73DRAFT_95973 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379718|gb|EGO20873.1| hypothetical protein SERLADRAFT_358117 [Serpula lacrymans var.
lacrymans S7.9]
Length = 462
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 23 FELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSM 82
F G+ R + ++ + ++R +++V L S + R VL G G GKS
Sbjct: 128 FRRFGLPRKMLLEFRLLSRPCTVVRGITIDVVDKLDSASRASSSDTRLVLTGAPGCGKSF 187
Query: 83 ALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNT 142
L+ A+QY ++L+++IP + + + + + + A L+ F N+
Sbjct: 188 LLLQAVQYCASKDWLVLYIPRGVSLVNSTTAYVYDIRTQTYLQ-PVFAYQTLQRFLTVNS 246
Query: 143 KWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEG 202
L+ L+T Q R A PL LI G+ A V+ L E+ + +T
Sbjct: 247 AKLQS--LSTRQATELERRPPLPAGTPLIDLINVGLRDQIVAPTVLTALMNELGQQTTHP 304
Query: 203 VCRTFVCVDGYNSFFAEKTNCKP 225
V + VD + + F + T P
Sbjct: 305 V---LLAVDDFQALFCKSTYRDP 324
>gi|116180894|ref|XP_001220296.1| hypothetical protein CHGG_01075 [Chaetomium globosum CBS 148.51]
gi|88185372|gb|EAQ92840.1| hypothetical protein CHGG_01075 [Chaetomium globosum CBS 148.51]
Length = 480
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 4 SKQDLYKFYTLPDEVRSAIF--ELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMT 61
+ +++ + +LP EV+ + E T+ + +F + S+L+R ++L +++
Sbjct: 121 AAENIARVLSLPAEVQDQLRADEAFKTTQCWG----MFRKPSVLVRKETVDLTNQMQNSA 176
Query: 62 NFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
++ + R V+ G+ VGKSM L+ A+ YAH NN++++H+P
Sbjct: 177 E-NKKTLRLVVTGDKVVGKSMMLLQAMAYAHLNNWIVIHLP 216
>gi|410033876|ref|XP_001143154.2| PREDICTED: 28S ribosomal protein S29, mitochondrial-like, partial
[Pan troglodytes]
Length = 96
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 271 SHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKKWLQ-----TSEGREEIA 325
S P + + GF+++DPF+PI V N +EF + + Y WLQ T EG++E+
Sbjct: 20 SQPPKVLGLQEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEGKKELL 79
Query: 326 FLTKRVPQKMYEFCSF 341
FL+ P + C++
Sbjct: 80 FLSNANPSLLERHCAY 95
>gi|403415139|emb|CCM01839.1| predicted protein [Fibroporia radiculosa]
Length = 461
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 27 GITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVY 86
G+ + + ++ ++ ++R+ L+ V L + R ++ G G GKS L+
Sbjct: 120 GVPKNLLIEFRVLSKPCSVVRDVTLKAVDTLDAAGMTPSRDTRLIMTGPSGCGKSYLLLQ 179
Query: 87 ALQYAHENNYLLVHIPWVLRW------FAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQ 140
++YA NN+++++IP ++ + Y E L LR F
Sbjct: 180 TVEYATHNNWIVLYIPRAIQLVNSSTTYVYDPRTRTYHQPEYSYQL-------LRRFLSV 232
Query: 141 NTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLST 200
N+ L++ TS+E + A PL L+E GI AS V+ L +E+ + ST
Sbjct: 233 NSTALQN---ITSREDLPLGDHTIPAGSPLTELVEAGIHNKDLASVVLSALMSELSQQST 289
Query: 201 EGVCRTFVCVD------GYNSF 216
V + VD GY+S+
Sbjct: 290 YPV---LLAVDDAQALYGYSSY 308
>gi|321249675|ref|XP_003191533.1| mitochondrial carrier protein [Cryptococcus gattii WM276]
gi|317458000|gb|ADV19746.1| Mitochondrial carrier protein, putative [Cryptococcus gattii WM276]
Length = 437
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 133/331 (40%), Gaps = 50/331 (15%)
Query: 6 QDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDR 65
QD K + LP ++ GG V +R L LV ++
Sbjct: 99 QDKLKSFGLPSKIDKEYASAGGPASV--------------VREATLGLVKRVEGAKTGSS 144
Query: 66 PSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW------FAYPKEVSHSLT 119
R++L GE G GKS+ LV ++ YA E+ +++++ P +W + Y E
Sbjct: 145 KLARYILTGERGSGKSVLLVQSVAYAIESGWIVLYSPRASKWVNSTSQYIYDPETKTYAQ 204
Query: 120 KEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKS-EANIPLAALIEHGI 178
E ++ L + N L L+ E V + KS +A +A L + G+
Sbjct: 205 WESAQNI-------LSVLLETNKDKLSAIELS---ERVELTKGKSVKAGESVAVLAQLGV 254
Query: 179 TRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTL 238
+ A V++ + ++K + V +D + F + + D + + P ++
Sbjct: 255 KDDRSAVKVLEAVVDALEKQTKFPV---LWAIDEAQTLF-NTSKYRAADYTPIEPYHLST 310
Query: 239 TRSVINLV--QSDWNNGAIV--LALSPRANLPD--RRESHLPLYMLKKAGFESIDPF--- 289
R ++ + + ++ GA+V L+LS +NLP R + + I+P+
Sbjct: 311 PRLALDFITGRRSFSRGAVVTSLSLSDPSNLPSPALRSALSLSSSTPLTPYTPINPYHLA 370
Query: 290 -----VPIHVP-ELNDEEFHNLLNLYESKKW 314
PI+VP +N +E L L+ K W
Sbjct: 371 HAESLTPINVPCGMNSQEAAGLFELFARKGW 401
>gi|357458023|ref|XP_003599292.1| 28S ribosomal protein S29 [Medicago truncatula]
gi|355488340|gb|AES69543.1| 28S ribosomal protein S29 [Medicago truncatula]
Length = 446
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 126/313 (40%), Gaps = 38/313 (12%)
Query: 1 TKHSKQDLYKFYTLPDEVRSAIFELG---GITRVFNEQTQIFNESSILIRNCMLELVGYL 57
+K + D+ ++ L E A+ G G+ + F + + +++++R L+L
Sbjct: 95 SKLTNNDICTYFNLTKEGLDAVLPEGLPIGMEKEFKDSMR----TALMVRQSFLDLRDNF 150
Query: 58 KSMTNFDRPSP---------RFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWF 108
K + + SP + VL G GKS+AL +Q+A E +L++++P W
Sbjct: 151 KRVVDPRMWSPHGKGVKVRKQVVLDGPVSCGKSIALAMLVQWAREEGWLVLYVPSAKEWT 210
Query: 109 AYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLE-------DPRLTTSQEYVWSPR 161
H T G+ D + A L+ F K N +L+ DP V +
Sbjct: 211 HGGFFYKHPQT--GLWDTPVQAENVLKDFLKYNESYLKELPCQIFDPIPLGEGAGVGWLK 268
Query: 162 EKSEANIP----LAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFF 217
+ IP L L++ GI + A VV L E+ + V V YN++F
Sbjct: 269 DVDSMAIPEGTMLYELVKTGIEQTHAAVGVVVRLRKELSLVKNMPVLIAIDQVRNYNNWF 328
Query: 218 AEKTNCKPEDKSKVLP---SRVTLTRSVINLVQSDWNNGAIVLALSP---RANLPD---R 268
+P P +T+ ++ +++ D GA + + R +LPD
Sbjct: 329 TFSEYEEPVTIRSCRPIHAKELTMVKAFRSMMHDDMMVGAFSHSTAVGKLRKDLPDVPVD 388
Query: 269 RESHLPLYMLKKA 281
+ P Y L++A
Sbjct: 389 ARAMFPRYSLEEA 401
>gi|393240740|gb|EJD48265.1| hypothetical protein AURDEDRAFT_113093 [Auricularia delicata
TFB-10046 SS5]
Length = 444
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 27 GITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVY 86
G R + + + +IR C L+L L N D+ S R +L G G GKS L+
Sbjct: 131 GTPRSLEHDFALLSRPASVIRQCTLDLFQLLDGTHN-DQSSVRKILAGPGGCGKSYTLLQ 189
Query: 87 ALQYAHENNYLLVHIPWVL 105
A++YA N +++V++P +
Sbjct: 190 AVEYASRNGWMVVYVPRAI 208
>gi|405966543|gb|EKC31817.1| 28S ribosomal protein S29, mitochondrial [Crassostrea gigas]
Length = 971
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 27/122 (22%)
Query: 78 VGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHF 137
GK + + + Y N++L+ +PW W +VS + KE + DL + + + L F
Sbjct: 3 AGKKFTMTHIMHYCRSQNWVLLTVPWANEWNCKRLDVSFNHHKESLFDLPVHSKILLEDF 62
Query: 138 QKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKK 197
+N ++ +E+ GITR+K+A+DVV L E++
Sbjct: 63 LLKN--------MSLIKEFT-------------------GITRMKFANDVVGALLKELQI 95
Query: 198 LS 199
L+
Sbjct: 96 LA 97
>gi|392565221|gb|EIW58398.1| hypothetical protein TRAVEDRAFT_148525 [Trametes versicolor
FP-101664 SS1]
Length = 450
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 10/218 (4%)
Query: 45 LIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWV 104
+IR ++L+ L + R VL G+ G GKS L+ A+QY+ + +++ ++IP
Sbjct: 139 VIREATVDLLDQLDKASGSSSKDTRLVLTGKTGCGKSYLLLQAVQYSIQKDWISLYIPRA 198
Query: 105 LRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKS 164
+ ++ + A L+ F N + L T Y + RE S
Sbjct: 199 ISLVNSSSSYAYDARTQTYGQPAF-AQQLLKRFVDVNEALVRS--LATQAAYTFDEREFS 255
Query: 165 EANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCK 224
+ L LI G+ +A V+ L E+ K + V + +D + + F
Sbjct: 256 -SGAQLMDLINLGLENQNHAPAVLTALLDELAKQTKYPV---LLAIDDFQALFCMSQYRD 311
Query: 225 PEDKSKVLPSRVTLTRSVINLV--QSDWNNGAIVLALS 260
P KS + +T R+++ + + GA++ ALS
Sbjct: 312 PLFKS-IKAYHLTFPRTLLEFASGKKSFARGAVLGALS 348
>gi|340504782|gb|EGR31197.1| mitochondrial ribosomal protein s29, putative [Ichthyophthirius
multifiliis]
Length = 465
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 59 SMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWF--AYPKEVSH 116
S+ NF + +L+G+HG GKS L+Y +AH N +++V++P W ++P + H
Sbjct: 132 SLDNFVGFNSGCMLFGDHGSGKSGVLLYVTMWAHYNKWIVVNVPNAYDWTQKSHPYQ-RH 190
Query: 117 SLTKEGMVDLNIDAAMWLRHFQKQNTKWLE 146
LT G+ N A WL+ F+ N L+
Sbjct: 191 PLT--GIYIQNELANEWLKSFKHSNESLLK 218
>gi|66812820|ref|XP_640589.1| hypothetical protein DDB_G0281699 [Dictyostelium discoideum AX4]
gi|60468608|gb|EAL66611.1| hypothetical protein DDB_G0281699 [Dictyostelium discoideum AX4]
Length = 403
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 141/339 (41%), Gaps = 55/339 (16%)
Query: 9 YKFYTLPDEVRSAIFELGGITRVFNEQTQIF----NESSILIRNCMLELVGYLKSM--TN 62
Y+F TL +E +EL + + N+ T+ F + L+R E + +L M
Sbjct: 79 YQFLTLTNEQ----WELA-LGKEVNKNTKDFFDLTKSRTTLLRKPTFETIQWLSKMKEQR 133
Query: 63 FDRPSPR---FVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLT 119
F + SP+ VL G G GKS++L +A + ++L+V+IP S +
Sbjct: 134 FYKESPQDYCRVLDGVAGSGKSISLAQVAFWAQQQDWLVVYIP----------NASSFIN 183
Query: 120 KEGMVDLNIDAAM---------WLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPL 170
+ + NI+ + +++ F + N L + +L T + + S +S N L
Sbjct: 184 RGALTHFNINPLLFAQNNLCFNFIKQFVEVNHAKLREIKLKTKFK-IESTGWESSPNKTL 242
Query: 171 AALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSK 230
L ++ KY S ++ + ++L+T V +DG+N F+ D +
Sbjct: 243 FDL----LSSTKYDSS-SEIFYHFKRELNTIHEFPVLVAIDGFNHFYRPSDYGDMYDSAS 297
Query: 231 ---VLPSRVTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESID 287
LP+ + S+ + S + +VLA + N+ +RE FE I
Sbjct: 298 NLGTLPTDRLMASSLFKNITSHQISNGVVLAAT--TNVIPKREM-----------FEVIP 344
Query: 288 PFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIAF 326
++VP EF +N K+L+ S +E I +
Sbjct: 345 EESVLNVPIFTIYEFKLFINYLVETKYLEKSPNQETIEY 383
>gi|336265414|ref|XP_003347478.1| hypothetical protein SMAC_08045 [Sordaria macrospora k-hell]
gi|380087960|emb|CCC05178.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 472
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 136/310 (43%), Gaps = 45/310 (14%)
Query: 4 SKQD-LYKFYTLPDEVRSAIFELGGITRVFNEQTQ---IFNESSILIRNCMLELVGYLKS 59
SKQD + LP++V A+ + + TQ IF + ++L+R ++LV +K+
Sbjct: 113 SKQDNVGTIKALPEDVVDALRAMEAF-----KPTQCWGIFRQPAMLVRQETVDLVNKMKA 167
Query: 60 MTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLT 119
R R V+ G GKSM L+ A+ +A N+++++HIP +E++ ++T
Sbjct: 168 AEK-GRKMIRVVIEGNRITGKSMMLLQAMTHAFMNDWVVLHIPEA-------QELTTAVT 219
Query: 120 KEGMVDLNIDAAMW---------LRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPL 170
+ ++ + +W L+ F++ N K L R+ T + P+ IP+
Sbjct: 220 EYAPIE---SSPLWTQPTYTLKLLQAFKRANEKVLS--RMNTVYSHADLPQ-----IIPI 269
Query: 171 AALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCR--TFVCVDGYNSFFAEKTNCKPEDK 228
+ + I K A V ++L+ E R +DG K + +
Sbjct: 270 NSPLLQLINSAKEADGAWAVFQALWRELNAENAGRPPILFSLDGLAHIM--KVSDYRDPA 327
Query: 229 SKVLPSR-VTLTRSVINLVQSD--WNNGAIVLALSPRANLPDRRESHLPLYMLKKAGFES 285
K++ S +TL + +++ + NG VLA + R N P R + + L + ++ ++
Sbjct: 328 FKLIHSHDLTLVKLFTDILSGNQVMPNGGAVLAATTRGNSP--RSASMELAIAQREAEKA 385
Query: 286 IDPFVPIHVP 295
VP P
Sbjct: 386 KAEVVPQRDP 395
>gi|408397894|gb|EKJ77031.1| hypothetical protein FPSE_02675 [Fusarium pseudograminearum CS3096]
Length = 460
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 10 KFYTLPDEVRSAIFELGGITRVFNEQT-QIFNESSILIRNCMLELVGYLKSMTNFDRPSP 68
K + +PD+V + L + QT +F + +L+R LEL+ L+ ++ ++ +
Sbjct: 111 KVFAMPDQV---VDHLRALEAFKTTQTWNLFRKPHVLLRKETLELMKKLE-LSVKEKKAL 166
Query: 69 RFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+ VL G GKSMA++ A+ YA NN+++ HIP
Sbjct: 167 KCVLTGSKLSGKSMAMLQAMSYALLNNWVVFHIP 200
>gi|449455118|ref|XP_004145300.1| PREDICTED: uncharacterized protein LOC101220451 [Cucumis sativus]
Length = 454
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 42/241 (17%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELG---GITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+++D ++ L E + + G G+ + F E + S++L+R L+L + +
Sbjct: 111 TRKDAGTYFKLNMEGLNEVLPEGLPMGMVKEFEESIR----SAVLVRQSFLDLRDNFRRV 166
Query: 61 TNFDRPSP-------RFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW------ 107
+ SP + VL G GKS+AL +Q+A E +L++++P RW
Sbjct: 167 VDPSLLSPAGSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFF 226
Query: 108 FAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLE-------DPRLTTSQEYVWSP 160
F P + G+ D + A LR F K N L +P V
Sbjct: 227 FKNP--------QTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMA 278
Query: 161 REKSEANIP----LAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSF 216
+ +P L LI+ GI K+ V V+ K+LS + +D YN++
Sbjct: 279 KGADSMRMPEGSTLYDLIDTGI---KHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNW 335
Query: 217 F 217
F
Sbjct: 336 F 336
>gi|303270923|ref|XP_003054823.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462797|gb|EEH60075.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 699
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 41/235 (17%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF 63
+ +D+ KF++LP+ V + + + F+ + +L R C LE+ ++S +
Sbjct: 286 TAEDVGKFWSLPESVVAEAETPAALRKEFD----VTKTRRVLFRACDLEIKNAIESGVSV 341
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP---WVLRWFAYPKEVSHSLTK 120
+L G+ G GKS++L + +A YL++++P + + Y K+ +
Sbjct: 342 -------LLDGQAGSGKSVSLANVVSWARATGYLVLYVPSGKAMCTYSNYSKDEA----- 389
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITR 180
G+ + AA+ ++ Q+ + LE+ R+T + A L AL
Sbjct: 390 SGLWNTPDHAALLIKWLQEGSASALEEIRMTQT------------ARDGLEALEAEPTQT 437
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSR 235
V A +V+ + + + VD YN+ F P D +VL R
Sbjct: 438 VDAALAIVEAFKSAARDQGK----KVLFAVDEYNALFG------PSDMHEVLGPR 482
>gi|356539682|ref|XP_003538324.1| PREDICTED: 28S ribosomal protein S29, mitochondrial-like [Glycine
max]
Length = 436
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 44/296 (14%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF 63
S+ D+ ++ L + + + G + NE Q +++L+R L+L + +
Sbjct: 91 SRNDVCTYFKLTKDALNKVLPEGLPVGMVNE-FQDSLRTALLVRQSFLDLRDNFRRVV-- 147
Query: 64 DRP-----------SPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP----WVLRWF 108
D P + VL G GKS+AL +Q+A E +L++++P W F
Sbjct: 148 DPPMWSSNGKGVKVRKQVVLDGPVSCGKSIALAMLVQWAREEGWLVLYVPKGKDWTHGGF 207
Query: 109 AYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLE-------DPRLTTSQEYVWSPR 161
Y H T G+ D + A L+ F K N +L+ DP L V +
Sbjct: 208 FY----KHPQT--GLWDTPVQAEDVLKDFLKYNESYLKEMPCQIFDPILLGEGAGVGWLK 261
Query: 162 EKSEANIP----LAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFF 217
+ IP L L++ GI + A VV L E+ + V + VD YN++F
Sbjct: 262 DVDSLAIPEGTNLYELVKTGIEQTHAAIGVVVRLRKELSLVKDRPV---LIAVDQYNNWF 318
Query: 218 AEKTNCKPEDKSKVLP---SRVTLTRSVINLVQSDWNNGAIVLALSP---RANLPD 267
+P P + + ++ ++V D GA + + R +LPD
Sbjct: 319 TFSEYEEPVTIRSCRPIHARELAMVKAFRSMVHDDMMVGAFSHSTAVGKLRKDLPD 374
>gi|403160783|ref|XP_003321227.2| hypothetical protein PGTG_02269 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170395|gb|EFP76808.2| hypothetical protein PGTG_02269 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 457
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 46 IRNCMLELVGYL---KSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+R ++L+ L K T D+P+ L G+ G GKS+ L++ L YA +N +++++IP
Sbjct: 136 LRKASVDLISRLAQAKKSTTTDKPN-VLTLNGQAGTGKSVTLLHGLSYAVQNRWIVIYIP 194
Query: 103 ----WVLRWFAY---PK-------EVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDP 148
V ++Y P+ +S L ++ + +++ + + TK D
Sbjct: 195 DAKCVVDGQYSYEYCPRTETYHQNSLSAELIRKIIAINDLEGLTLTKGCKLFGTK---DD 251
Query: 149 RLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFV 208
R+ +E + A L L + GI A +V+ +LF E+ S + V F
Sbjct: 252 RMVDYEEEI-------PAGTGLKNLAQLGIQMTHLAPNVLQILFEELAAQSQKPV---FF 301
Query: 209 CVDGYNSFFAEKTNCKPED 227
+DG + F KP D
Sbjct: 302 AIDGAQNLF------KPSD 314
>gi|159490950|ref|XP_001703436.1| hypothetical protein CHLREDRAFT_143849 [Chlamydomonas reinhardtii]
gi|158280360|gb|EDP06118.1| hypothetical protein CHLREDRAFT_143849 [Chlamydomonas reinhardtii]
Length = 441
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 11 FYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRF 70
FYT R E G + ++ + +SIL R M L G + + PR
Sbjct: 44 FYT----PRDPGHERRGGCKALQQEMEATGRASILYRPIMAALNGAVAAGQQ-----PRL 94
Query: 71 VLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVL 105
+L G G GKS+AL+ +++A + +L+V++P L
Sbjct: 95 LLTGPAGCGKSLALLGLVEWARQQGWLVVYVPSCL 129
>gi|71666390|ref|XP_820154.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885488|gb|EAN98303.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 500
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 57 LKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSH 116
L S+TN +RP F++ G G GKS + + YA N L +++P W + +
Sbjct: 135 LSSLTN-NRPG--FIIDGPKGCGKSALMCQVVHYARSRNLLTLYVPNAKEW-THGEWCWP 190
Query: 117 SLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIP-LAALIE 175
S G D A +LR+F K N L RL + + P E+ E L L E
Sbjct: 191 STILPGFFDAPDAARFFLRYFAKANRSTLLSWRLKCTPNDL--PVEQGERQPQNLYELCE 248
Query: 176 HGITRVKYAS---DVVDVLFTEIKKLSTEGVCRTFVCVDGYNSF 216
G V AS V V F + +LS E + VDG+N F
Sbjct: 249 WGHQVVAPASIDRQSVCVKFL-MDELSAEKKLPIVIVVDGWNLF 291
>gi|407844516|gb|EKG01986.1| hypothetical protein TCSYLVIO_006998 [Trypanosoma cruzi]
Length = 500
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 57 LKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSH 116
L S+TN +RP F++ G G GKS + + YA N L +++P W + +
Sbjct: 135 LSSLTN-NRPG--FIIDGPKGCGKSALMCQVVHYARSRNLLTLYVPNAKEW-THGEWCWP 190
Query: 117 SLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIP-LAALIE 175
S G D A +LR+F K N L RL + + P E+ E L L E
Sbjct: 191 STILPGFFDAPDAARFFLRYFAKANRSTLLSWRLKCTPNDL--PVEQGERQPQNLYELCE 248
Query: 176 HGITRVKYAS---DVVDVLFTEIKKLSTEGVCRTFVCVDGYNSF 216
G V AS V V F + +LS E + VDG+N F
Sbjct: 249 WGHQVVAPASIDRQSVCVKFL-MDELSAEKKLPIVIVVDGWNLF 291
>gi|71663123|ref|XP_818558.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883817|gb|EAN96707.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 500
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 57 LKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSH 116
L S+TN +RP F++ G G GKS + + YA N L +++P W + +
Sbjct: 135 LSSLTN-NRPG--FIIDGPKGCGKSALMCQVVHYARSRNLLTLYVPNAKEW-THGEWCWP 190
Query: 117 SLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIP-LAALIE 175
S G D A +LR+F K N L RL + + P E+ E L L E
Sbjct: 191 STILPGFFDAPDAARFFLRYFAKANRSTLLSWRLKCTPNDL--PVEQGERQPQNLYELCE 248
Query: 176 HGITRVKYAS---DVVDVLFTEIKKLSTEGVCRTFVCVDGYNSF 216
G V AS V V F + +LS E + VDG+N F
Sbjct: 249 WGHQVVAPASIDRQSVCVKFL-MDELSAEKKLPIVIVVDGWNLF 291
>gi|393240885|gb|EJD48409.1| hypothetical protein AURDEDRAFT_122805 [Auricularia delicata
TFB-10046 SS5]
Length = 739
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 23 FELGGITR---VFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRF--VLYGEHG 77
FE GG TR I N S +L+RN L+L YL + P RF ++YG G
Sbjct: 42 FEDGGSTRSILCIKNSFDILNPSPLLVRNAYLDLWNYLSEVYLNASPPRRFGTLVYGHPG 101
Query: 78 VGKSMALVYALQYAHENNYLLV 99
+GKS++L + + A E+ V
Sbjct: 102 IGKSLSLFFLMCAAAEHRIPFV 123
>gi|356565942|ref|XP_003551194.1| PREDICTED: uncharacterized protein LOC100786442 [Glycine max]
Length = 437
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 50/299 (16%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELG---GITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
S+ D+ ++ L + + + G G+ F + + +++L+R L+L + +
Sbjct: 92 SRNDVCTYFKLTKDALNKVLPEGLPMGMVDEFQDSLR----TALLVRQSFLDLRDNFRRV 147
Query: 61 TNFDRP-----------SPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP----WVL 105
D P + VL G GKS+ L +Q+A E +L++++P W
Sbjct: 148 V--DPPMWSSNGKGVKVRKQVVLDGPVSCGKSIVLAMLVQWAREEGWLVLYVPKGKDWTH 205
Query: 106 RWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLE-------DPRLTTSQEYVW 158
F Y H T G+ D + A L+ F K N +L+ DP L V
Sbjct: 206 GGFFY----KHPQT--GLWDTPVQAENVLKDFLKYNESYLKEMPCQIFDPILLGEGAGVG 259
Query: 159 SPREKSEANIP----LAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYN 214
++ IP L L++ GI + A VV L E+ + V + VD YN
Sbjct: 260 WLKDVDSLAIPEGTNLYELVKAGIEQTHAAVGVVVRLRKELSLVKDRPV---LIAVDQYN 316
Query: 215 SFFAEKTNCKPEDKSKVLP---SRVTLTRSVINLVQSDWNNGAIVLALSP---RANLPD 267
++F +P P +T+ ++ ++V D GA + + R +LPD
Sbjct: 317 NWFTFSEYEEPVTIRSCRPIHARELTMVKAFRSMVHDDMMVGAFSHSTAVGKLRKDLPD 375
>gi|307106979|gb|EFN55223.1| hypothetical protein CHLNCDRAFT_134474 [Chlorella variabilis]
Length = 539
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 35/248 (14%)
Query: 43 SILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
S++ R CM +L ++ T + L G G GKS+AL + +A +L +++P
Sbjct: 237 SLMARECMQQLAAVVQERTRR-----QLYLDGWAGSGKSVALYSLVAWARAQGWLALYLP 291
Query: 103 WVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWL-RHFQKQNTKWLEDPRLTTSQEYVWSPR 161
F+ + + + ++G+ D +AA WL + + L D + + Q
Sbjct: 292 SA---FSLVQTGTFTRGEDGLWD-TPEAARWLLSSLRDSHAAQLPDVKAPSGQ------- 340
Query: 162 EKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKT 221
PL+ L+E G+ + VV + ++ T + VD YN ++
Sbjct: 341 -------PLSELVEEGLAAGAKPAAVVAAAIAAKEAVAASTELPTLIAVDDYNVLYSHTG 393
Query: 222 ---NCKPEDKSKVLPSRVTLTRSVINLVQSDWNNGAIVLA------LSPRANLPDRRES- 271
+ + ++ P + L R+ L Q NG +V A +S + +P R++
Sbjct: 394 YHESLHSFHRRQLAPDELRLVRAFRVLEQPPPANGVVVAAPTFGQLVSDKLRVPRARQAR 453
Query: 272 -HLPLYML 278
H+P Y L
Sbjct: 454 FHVPRYCL 461
>gi|367044194|ref|XP_003652477.1| hypothetical protein THITE_2114017 [Thielavia terrestris NRRL 8126]
gi|346999739|gb|AEO66141.1| hypothetical protein THITE_2114017 [Thielavia terrestris NRRL 8126]
Length = 484
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 6 QDLYKFYTLPDEVRSAI--FELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF 63
Q++ + +P+EV+ + E T+ + +F + S+L+R ++L +++ +
Sbjct: 125 QNIARVLAIPEEVQDQLRAAEAFKTTQCWG----MFRKPSVLVRKETVDLASQMQASADQ 180
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+ + R V+ G+ GKS+ L+ A+ YA NN++++H P
Sbjct: 181 QQ-TLRLVVTGDKVTGKSLMLLQAMTYAFLNNWIVIHFP 218
>gi|145511966|ref|XP_001441905.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409166|emb|CAK74508.1| unnamed protein product [Paramecium tetraurelia]
Length = 672
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 94/249 (37%), Gaps = 59/249 (23%)
Query: 67 SPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDL 126
S + YG+HG GKS L+ A+ +A + +++ +P W + E K G+
Sbjct: 348 SSNLLFYGDHGAGKSGVLMQAIIFAQQTGWIVAVVPSGYNWTSLKYEAKRHF-KTGLYMQ 406
Query: 127 NIDAAMWLRHFQKQNTKWL--------------------EDP------------------ 148
A WL F++ N + L +DP
Sbjct: 407 PKAAQEWLEQFKEANQEHLKTFQVDLSLYGKFNLSGVHDDDPDPCPNLYDERRGYHFKDF 466
Query: 149 -RLTT--------SQEYVWSPREKSEANIP--LAALIEHGITRVKYASDVVDVLFTEIKK 197
+ TT +Q+ + S R + P L +I++GI+ YA++ V + +++
Sbjct: 467 EKFTTQEERDFEEAQDQIMSARITLKIPKPQYLQEIIDYGISNAHYATNAV---YEVMEQ 523
Query: 198 LSTEGVCRTFVCVDGYNSFF------AEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWN 251
L + V VDG N F+ + + + + V P ++L R ++
Sbjct: 524 LYNTEKYKVLVAVDGINWFYRPSQIPSFRYESDKDLRGHVPPYHMSLPRLFMHFDGHKIK 583
Query: 252 NGAIVLALS 260
NG + A S
Sbjct: 584 NGTKITASS 592
>gi|449464748|ref|XP_004150091.1| PREDICTED: uncharacterized protein LOC101212097 [Cucumis sativus]
Length = 445
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 35/213 (16%)
Query: 27 GITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSP-------RFVLYGEHGVG 79
G+ + F E + S++L+R L+L + + + SP + VL G G
Sbjct: 138 GMVKEFEESIR----SAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKIRKQIVLDGPVNCG 193
Query: 80 KSMALVYALQYAHENNYLLVHIPWVLRW----FAYPKEVSHSLTKEGMVDLNIDAAMWLR 135
KS+AL +Q+A E +L++++P RW F + + G+ D + A LR
Sbjct: 194 KSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNH------QTGLWDTPVQAEDVLR 247
Query: 136 HFQKQNTKWLE-------DPRLTTSQEYVWSPREKSEANIP----LAALIEHGITRVKYA 184
F K N L +P V + +P L LI+ GI K+
Sbjct: 248 DFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTGI---KHT 304
Query: 185 SDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFF 217
V V+ K+LS + +D YN++F
Sbjct: 305 HVAVGVVVRLRKELSLVKDIPVLIAIDQYNNYF 337
>gi|85111317|ref|XP_963879.1| hypothetical protein NCU08120 [Neurospora crassa OR74A]
gi|28925624|gb|EAA34643.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 469
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 4 SKQD-LYKFYTLPDEVRSAIFELGGITRVFNEQTQ---IFNESSILIRNCMLELVGYLKS 59
+KQD + LP++V A+ + + TQ IF + S+LIR ++L +K+
Sbjct: 110 AKQDNVGSVKALPEDVVDALRAMEAF-----KPTQCWGIFRQPSVLIRQETVDLTKKMKA 164
Query: 60 MTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
D + R V+ G GKS+ L+ A+ +A N+++++HIP
Sbjct: 165 -AGADGKTIRMVIEGNRVTGKSLLLLQAMTHAFMNDWVVLHIP 206
>gi|449548060|gb|EMD39027.1| hypothetical protein CERSUDRAFT_104297 [Ceriporiopsis subvermispora
B]
Length = 453
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 103/235 (43%), Gaps = 12/235 (5%)
Query: 12 YTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFV 71
+TL D + + + G+ + + +I + ++R+ ++LV L + + + R V
Sbjct: 113 FTLAD---NEVIKAYGVPKNLLVEFRILSNPCTVVRSETVKLVDELDAAQSGPSSASRVV 169
Query: 72 LYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAA 131
L G G GKS L+ A++YA ++++++I + S+ ++
Sbjct: 170 LTGPSGCGKSTLLLQAVEYAVRRDWIVLYISRAIPLVTSSTPFSYDPRTRTYEQPDVSYE 229
Query: 132 MWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVL 191
+ LR FQ N + L P T +Y + R + + ++ L + G V+ S VL
Sbjct: 230 I-LRRFQSVNAQHLNIPVQT---DYPFETRTVRKGDT-ISQLAKAG---VEDPSIAAAVL 281
Query: 192 FTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLV 246
+++L+ + + VD + F P+ ++ V+P ++L R ++
Sbjct: 282 LAVMEELTKQTAFPVLLAVDDIQAMFRASLYRDPQMRA-VMPYHLSLPRKILEFA 335
>gi|406862480|gb|EKD15530.1| ribosomal protein DAP3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 490
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 115/273 (42%), Gaps = 37/273 (13%)
Query: 31 VFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQY 90
+F + S+++ M+E G +++ R VL G+ G GKS+ ++ A+
Sbjct: 167 IFRRPAVLIRGESVVMARRMMEAEGKAETI--------RMVLDGDKGTGKSLMMLSAMAT 218
Query: 91 AHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMV--------DLNIDAAMWLRHFQKQNT 142
A +++++IP +EV++++T + N A WL K N
Sbjct: 219 AFAKGWVVINIP-------EAQEVTNAMTAYAALPNTNPTLWSQNTYIANWLSQIAKANI 271
Query: 143 KWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEG 202
L+ T E + +P + L L E G + A + + ++E L+T G
Sbjct: 272 AVLQS---FTLPEELTAPITVPKGTT-LFRLCELGARDPEIAWPMFEAFWSE---LATPG 324
Query: 203 VCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWN--NGAIVLALS 260
+C+DG SF + + + +D S + + + R ++ + NG VLA +
Sbjct: 325 HPPVLMCLDGL-SFAMQDSLYRAQDFSLIHAHDLAVIRHFVDHLSGTKKLPNGGAVLAAT 383
Query: 261 PRANLPDRRESHLPLYML--KKAG--FESIDPF 289
R++ P + +L + ++AG DPF
Sbjct: 384 SRSHAPVSKSLNLAIKQAEDRQAGRNITPKDPF 416
>gi|302763717|ref|XP_002965280.1| hypothetical protein SELMODRAFT_82814 [Selaginella moellendorffii]
gi|300167513|gb|EFJ34118.1| hypothetical protein SELMODRAFT_82814 [Selaginella moellendorffii]
Length = 278
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 65 RPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP----WVLRWFAYPKEVSHSLTK 120
R S +L G G GKS AL +Q+A +L+ ++P W + Y E++
Sbjct: 3 RGSKHHILDGPVGCGKSFALAVIVQWARAQGWLVFYVPRGQEWTRGGYYYLNELT----- 57
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLE-------DPRL---TTSQEYVWSPREKS-EANIP 169
G+ D I A LR F + + LE DP T + + P+E + N
Sbjct: 58 -GLWDTPIQAQKVLREFLDSHGEMLEQIKCRVPDPIFLGETAALGRIPGPQEITMPENST 116
Query: 170 LAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFF 217
+ L+E G+ AS++V L E+ L TE + VD +NS+F
Sbjct: 117 VKDLVEKGLDVQAAASNIVVRLRQEL-DLVTE--FPVLIAVDEFNSWF 161
>gi|336463177|gb|EGO51417.1| hypothetical protein NEUTE1DRAFT_70140 [Neurospora tetrasperma FGSC
2508]
gi|350297632|gb|EGZ78609.1| mitochondrial ribosomal protein [Neurospora tetrasperma FGSC 2509]
Length = 470
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 4 SKQD-LYKFYTLPDEVRSAIFELGGITRVFNEQTQ---IFNESSILIRNCMLELVGYLKS 59
+KQD + LP++V A+ + + TQ IF + S+LIR ++L +K+
Sbjct: 110 AKQDNVGSVKALPEDVVDALRAMEAF-----KPTQCWGIFRQPSVLIRQETVDLTKKMKA 164
Query: 60 MTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
D + R V+ G GKS+ L+ A+ +A N+++++HIP
Sbjct: 165 -AGADGKTIRMVIEGNRITGKSLLLLQAMTHAFMNDWVVLHIP 206
>gi|118350012|ref|XP_001008287.1| hypothetical protein TTHERM_00013070 [Tetrahymena thermophila]
gi|89290054|gb|EAR88042.1| hypothetical protein TTHERM_00013070 [Tetrahymena thermophila
SB210]
Length = 755
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 65/248 (26%)
Query: 71 VLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYP-KEVSHSLTKEGMVDLNID 129
+LYG+ G GKS L+Y +AH ++++++P W K V H K G+ N
Sbjct: 434 LLYGDSGSGKSGTLLYVTMWAHYKKWIVLNVPSAFNWTQKEWKFVRHP--KTGLYIQNEL 491
Query: 130 AAMWLRHFQKQNTKWL---------------------------------------EDPRL 150
A W++ F+ N+ L E +
Sbjct: 492 AQDWMKSFKHANSDLLKQIPVNMDIYGFYNLSGQHDKECDAVPDLYYKDRKVNFEEHKKF 551
Query: 151 TTSQEYV--------WSPREKSEANIPLAAL--IEHGITRVKYASDVVDVLFTEIKKLST 200
T +E + + R K + PL L I++G+ +A++ + + +I+ +
Sbjct: 552 LTEEENIIDGETNKDFRVRLKEKLTNPLTVLDIIDYGLENEFFATNALYEVLEQIR--NQ 609
Query: 201 EGVCRTFVCVDGYNSFFAEKTNCKP--------EDKSKVLPSRVTLTRSVINLVQSDWNN 252
+ C +DGYN F K + P + +S V P +T+ R+ +N + N
Sbjct: 610 DKFC-VLKVIDGYN--FMYKRSIYPSFRYATDTQLRSTVPPYHLTVPRAFLNFDGHKFKN 666
Query: 253 GAIVLALS 260
G ++ A S
Sbjct: 667 GFVLCASS 674
>gi|346979347|gb|EGY22799.1| hypothetical protein VDAG_04237 [Verticillium dahliae VdLs.17]
Length = 496
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELGGITRVFNEQT-QIFNESSILIRNCMLELVGYLKSMTN 62
SK++L + ++PD++ I +L + Q +F + +L+R ++++ L
Sbjct: 115 SKENLGRIISMPDKL---IDQLRALESFKTTQNWGLFRKPHMLVRKETMQMMERLNEAA- 170
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
++ + R VL GE GKS+ L+ A+ +A NN++++HIP
Sbjct: 171 AEKQTLRAVLTGERVSGKSLLLMQAMSHALLNNWVVIHIP 210
>gi|213406143|ref|XP_002173843.1| mitochondrial ribosomal protein subunit S23 [Schizosaccharomyces
japonicus yFS275]
gi|212001890|gb|EEB07550.1| mitochondrial ribosomal protein subunit S23 [Schizosaccharomyces
japonicus yFS275]
Length = 431
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 94/221 (42%), Gaps = 10/221 (4%)
Query: 12 YTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFV 71
+++P + +G IT + F++ ++L RN +V L+ T F+ R++
Sbjct: 93 FSIPKSAYEKLDTMGSITTQ-KKPFSFFDKPALLQRNITSTIVDILQRRTEFNSRDARYI 151
Query: 72 LYGEHGVGKSMALVYALQYAHEN-NYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDA 130
+ GE G G+S+AL+ A YA + N LL+ + W + + N+ A
Sbjct: 152 IDGEPGSGRSVALIQAQLYAFQQPNILLLAVNNCDFWTNSTSAYEFEENSQQWIQPNLTA 211
Query: 131 AMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIP-LAALIEHGITRVKYASDVVD 189
+ +L+ + N L+ L+ + S + N+ L L+ G+ A V+
Sbjct: 212 S-FLKPILEVNGNLLKKMALSN----IPSDTPSALQNVSHLHDLLSIGVKNTTAAPAVLK 266
Query: 190 VLFTEIKKLS--TEGVCRTFVCVDGYNSFFAEKTNCKPEDK 228
+ F ++++L + + VD + F PE+K
Sbjct: 267 LFFQQLQQLHLVDNAPVQILLTVDNLSIFTVPTRYKDPENK 307
>gi|145534923|ref|XP_001453200.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420911|emb|CAK85803.1| unnamed protein product [Paramecium tetraurelia]
Length = 672
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 93/249 (37%), Gaps = 59/249 (23%)
Query: 67 SPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDL 126
S + +G+HG GKS L+ A+ +A + +++ +P W + E K G+
Sbjct: 348 SSNLLFHGDHGAGKSGVLMQAIMFAQQTGWIVAVVPSGYNWTSLKYETKRHF-KTGLYMQ 406
Query: 127 NIDAAMWLRHFQKQNTKWLE--------------------DP------------------ 148
A WL F++ N LE DP
Sbjct: 407 PKAAQEWLEQFKEANQVHLETFQVDLSLYGKFNLSGVHDDDPDPCPNLYDERRGYHFKDF 466
Query: 149 -RLTT--------SQEYVWSPREKSEANIP--LAALIEHGITRVKYASDVVDVLFTEIKK 197
+ TT +Q+ + S R + P L +I++GI+ YA++ V + +++
Sbjct: 467 EKFTTQEERDFEEAQDQIMSARITLKIPKPQYLHEIIDYGISNAHYATNAV---YEVMEQ 523
Query: 198 LSTEGVCRTFVCVDGYNSFF------AEKTNCKPEDKSKVLPSRVTLTRSVINLVQSDWN 251
L + V VDG N F+ + + + + V P ++L R ++
Sbjct: 524 LYNTDKYKVLVAVDGINWFYRPSQIPSFRYESDKDLRGHVPPYHMSLPRLFMHFDGHKIK 583
Query: 252 NGAIVLALS 260
NG + A S
Sbjct: 584 NGTKITASS 592
>gi|409040716|gb|EKM50203.1| hypothetical protein PHACADRAFT_264802 [Phanerochaete carnosa
HHB-10118-sp]
Length = 415
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 16/243 (6%)
Query: 26 GGITRVFNEQTQIFNESSIL------IRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVG 79
GGI + + T + E +L +R+ L + L++ ++ R V+ G G G
Sbjct: 79 GGIIQAYGLPTNMLLEFRVLSKPCSLVRDVTLSTIEKLETASSKSSVETRAVITGLTGSG 138
Query: 80 KSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQK 139
KS L+ A++Y +++++++P + E + + + L+ FQ+
Sbjct: 139 KSYLLLQAVEYCKSKDWIVLYVPRAINLVNSSTEYVYDARTRTYLQPEFSFQL-LQRFQQ 197
Query: 140 QNTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLS 199
N ++L +LT R P+ L+ + V++ L E+ +
Sbjct: 198 VNARFLGALQLTKQFNI---GRRALPIGTPINELLNVAQRDKALSPFVLETLLKEVSRQK 254
Query: 200 TEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPSRVTLTRSVINLVQSD--WNNGAIVL 257
T V + VD + + + T + + V P ++L R ++ + + GA+V
Sbjct: 255 THPV---LLAVDDFQALYC-NTYYRDQQFQGVKPYHLSLPRLLLEFISGKRYFERGAVVG 310
Query: 258 ALS 260
A+S
Sbjct: 311 AVS 313
>gi|340924198|gb|EGS19101.1| hypothetical protein CTHT_0057250 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 487
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 5 KQDLYKFYTLPDEVRSAIFELGGITRVFNEQT-QIFNESSILIRNCMLELVGYLKSMTNF 63
KQ+ K +LPD+V + +L I Q ++F + S+L+R ++LV +++
Sbjct: 126 KQNEAKVLSLPDDV---VDQLRAIEAFKPTQNWKMFRKPSVLVRKETVDLVNRMQNAAG- 181
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+R + + V+ G+ GKS+ ++ A +A N ++++H+P
Sbjct: 182 NRQTLKLVVTGDKVSGKSLLILEAQAHAFMNEWIVIHLP 220
>gi|169850292|ref|XP_001831843.1| mitochondrial carrier protein [Coprinopsis cinerea okayama7#130]
gi|116507131|gb|EAU90026.1| mitochondrial carrier protein [Coprinopsis cinerea okayama7#130]
Length = 468
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 1 TKHSKQDLYKFYTLPDEVRS-AIFELGGI--TRVFNEQTQIFNESSIL------IRNCML 51
+KH+ +L KF P + + A F+L +VF ++F E I+ IR+ +
Sbjct: 103 SKHA-LELPKFKPTPKNIGTVAGFDLTPTNPAKVFGLPKKMFLEFRIMSKPCSVIRDVTV 161
Query: 52 ELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+ + L+S N + R VL G G GKS L A+QYA E +++ +IP
Sbjct: 162 DTIQKLESARNSSSLNNRLVLSGRAGCGKSYLLHQAVQYATEKGWIVFYIP 212
>gi|407405473|gb|EKF30440.1| hypothetical protein MOQ_005746 [Trypanosoma cruzi marinkellei]
Length = 500
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 57 LKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSH 116
L S+TN +RP F++ G G GKS + + YA N L +++P W + +
Sbjct: 135 LSSLTN-NRPG--FIIDGPKGCGKSALMCQVVHYARSRNLLTLYVPNAKEW-THGEWCWP 190
Query: 117 SLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIP-LAALIE 175
S G D A +LR+F K N L +L + + P E+ E L L E
Sbjct: 191 STILPGFFDAPDAARSFLRYFAKANRSTLLSWQLKCTPSDL--PVEQGERQPQNLYELCE 248
Query: 176 HGITRVKYAS---DVVDVLFTEIKKLSTEGVCRTFVCVDGYNSF 216
G V AS V V F + +LS E + VDG+N F
Sbjct: 249 WGHQVVAPASIDRQSVCVKFL-MDELSAEKKIPIVIVVDGWNLF 291
>gi|402584685|gb|EJW78626.1| hypothetical protein WUBG_10464 [Wuchereria bancrofti]
Length = 148
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNF 63
+ DL + Y + +E ++ + F +Q + NE L R LE LK +
Sbjct: 47 TAGDLGRLYQVSNEDIDTLYYRYMLPPKFRKQVETLNECVWLYRQPTLEATACLK-LAGI 105
Query: 64 DRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+ P+ R VL+G G GKSM + + + + ++L IP
Sbjct: 106 NIPNLRVVLWGRWGTGKSMTVYQTIYHVWKQGWVLFTIP 144
>gi|326524470|dbj|BAK00618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 992
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 16/105 (15%)
Query: 3 HSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNE------SSILIRNCMLELVGY 56
H++ D+++++ + +V +T++ E + N+ + ++IR +V
Sbjct: 555 HTEADMFRYFPVSPDV---------LTKIGPEMNKPLNDEFKHAGNFLMIRPPAFNIVQK 605
Query: 57 LKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHI 101
LK++T D +GE G GKS L YA+QYA + +LLV +
Sbjct: 606 LKTVTKGD-AGLLLSAHGERGCGKSATLHYAMQYAIQEKWLLVAV 649
>gi|302809827|ref|XP_002986606.1| hypothetical protein SELMODRAFT_124131 [Selaginella moellendorffii]
gi|300145789|gb|EFJ12463.1| hypothetical protein SELMODRAFT_124131 [Selaginella moellendorffii]
Length = 278
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 24/168 (14%)
Query: 65 RPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP----WVLRWFAYPKEVSHSLTK 120
R S +L G G GKS AL +Q+A +L+ ++P W + Y E++
Sbjct: 3 RGSKHHILDGPVGCGKSFALAVIVQWARAQGWLVFYVPRGQEWTRGGYYYLNELT----- 57
Query: 121 EGMVDLNIDAAMWLRHFQKQNTKWLE-------DPRLTTSQEYVWSPREKSEANIP---- 169
G+ D I A LR F + + LE DP + E +P
Sbjct: 58 -GLWDTPIQAQKVLREFLDSHGEMLEQIKCRVPDPIFLGEAAALGRIPGPQEITMPENST 116
Query: 170 LAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFF 217
+ L+E G+ AS++V L E+ L TE + VD +NS+F
Sbjct: 117 VKDLVEKGLDVQAAASNIVVRLRQEL-DLVTE--FPVLIAVDEFNSWF 161
>gi|358391493|gb|EHK40897.1| hypothetical protein TRIATDRAFT_130544 [Trichoderma atroviride IMI
206040]
Length = 461
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 10 KFYTLPDEVRSAIFELGGITRVFNEQT-QIFNESSILIRNCMLELVGYLKSMTNFDRPSP 68
K + +PD+V + +L + QT +F + +L+R +EL+G L++ + +
Sbjct: 112 KMFAIPDQV---VDQLRALEAFKTTQTWNLFRKPHVLVRKETVELMGKLEASVE-KKEAL 167
Query: 69 RFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+ VL G GKS+ L+ A YA N +++++IP
Sbjct: 168 KIVLTGSRLSGKSLTLLQAQSYALLNEWVVINIP 201
>gi|367014981|ref|XP_003681990.1| mitochondrial 37S ribosomal protein RSM23 [Torulaspora delbrueckii]
gi|359749651|emb|CCE92779.1| hypothetical protein TDEL_0E05360 [Torulaspora delbrueckii]
Length = 440
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 139/344 (40%), Gaps = 67/344 (19%)
Query: 21 AIFELGGITRVFNEQTQIFNESSILIRN-CMLELVGYLKSMTNFDRPSPRFVLYGEHGVG 79
+++ LG + N+ ++F + LIRN ++L+ L+S +N + ++ GE GVG
Sbjct: 93 SLYHLGSFHK--NQFNELFPKPVSLIRNESTVKLIKLLQSASN-----KKVIITGEPGVG 145
Query: 80 KSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAA-------M 132
KS+ L +A E++ +L+HI +YP+ L G D D M
Sbjct: 146 KSVLLSQVHAFACESSNVLIHI-------SYPE-----LFLNGRNDFFYDEKLKQYVQPM 193
Query: 133 WLRHFQKQ-----NTKWLEDPRLTTSQEYVWSPREKSEANIPLAALIEHGI--------T 179
+L+ F ++ + L +LT+ ++ + + S ++ L + T
Sbjct: 194 YLKKFLRKILKSNDENVLRSIKLTSDYKFSNADPKDSAIKKQISLLKDQNSLYDLLSIKT 253
Query: 180 RVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEK-TNCKPEDKSKVLPSRVTL 238
+ ++ D+ + TE LS + F VD ++ T+ K D + L
Sbjct: 254 QGRHRGDLFKAVITE---LSGQKKYPVFFTVDNFSKILTSPFTSYKDADNKNIHLLDFQL 310
Query: 239 TRSVINLVQSDW----NNGAIVLALSPRANLPDRRESHLPLYMLKKAGFESIDP------ 288
+++ +V + N A VLA S DR LP+ + K +DP
Sbjct: 311 GATIMQIVGGELAFPHQNSATVLATSG----VDRTNRTLPVAVGKLPEDVYVDPHHYDPK 366
Query: 289 FVPI---------HVPELNDEEFHNLLNLYESKKWLQTSEGREE 323
F I VP+L EE L+ Y + L S+ + +
Sbjct: 367 FAKILQKGGVQEFEVPKLRKEEVRELIEFYFKSEILLNSDSQNK 410
>gi|171695934|ref|XP_001912891.1| hypothetical protein [Podospora anserina S mat+]
gi|170948209|emb|CAP60373.1| unnamed protein product [Podospora anserina S mat+]
Length = 482
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 IFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYL 97
+F + S LIR + L G ++ ++ + R VL GE GKS L+ A +A+ NN++
Sbjct: 148 LFRKPSTLIRKETVGLTGKMEKAVE-NKQTARIVLAGEKISGKSTMLLQAQSHAYLNNWI 206
Query: 98 LVHIP 102
++H P
Sbjct: 207 VIHFP 211
>gi|361130207|gb|EHL02061.1| putative 37S ribosomal protein S23, mitochondrial [Glarea
lozoyensis 74030]
Length = 373
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 IFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYL 97
+FN+ +LIR +EL L S + ++ + R+V+ G G GKSM L++A A ++
Sbjct: 51 LFNKPGLLIRQESVELTRALVSAED-EKSTLRYVIEGSKGSGKSMMLLHAQAVAVARGWV 109
Query: 98 LVHIP 102
++H P
Sbjct: 110 VLHFP 114
>gi|403343959|gb|EJY71316.1| hypothetical protein OXYTRI_07812 [Oxytricha trifallax]
Length = 702
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 59 SMTNFDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
S+ F + +L+G GVGKS L YA + HENN+++V IP
Sbjct: 371 SLPQFKGVNSGVLLWGNRGVGKSQILTYASAWGHENNWVVVTIP 414
>gi|168010875|ref|XP_001758129.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690585|gb|EDQ76951.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 38/217 (17%)
Query: 26 GGITRVFNEQTQIFNESSILIRNCMLELVGYLK---------SMTNFDRPSPRFVLY-GE 75
GG+ + F E T+ +S++IR +L+L +L+ + D + +L G
Sbjct: 5 GGLVKEF-EATKA---NSLMIRPNVLQLCNFLERHATGKDCFQLLAEDADGKKHILLDGP 60
Query: 76 HGVGKSMALVYALQYAHENNYLLVHIP----WVLRWFAYPKEVSHSLTKEGMVDLNIDAA 131
G GKS+AL +Q+A +L+ +IP W Y E + G+V+ A
Sbjct: 61 TGSGKSVALAMLVQWARARGWLVFYIPSGKGWTHGSLYYRNE------ETGLVETPQTAQ 114
Query: 132 MWLRHFQKQNTKWLE-------DPRLTTSQEYVWSPREKSEANIPLAA----LIEHGITR 180
M L F K +++ L+ DP V R E +P A L+E G++
Sbjct: 115 MALEGFLKSHSELLDTLPCNISDPVPLGEGAGVPRVRGPQEFTLPEGATLKQLVEKGLSM 174
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFF 217
V L K+LS + +D YNS+F
Sbjct: 175 SHAGVGAVVRLR---KELSLVKDVPVLIAIDDYNSWF 208
>gi|225434411|ref|XP_002271596.1| PREDICTED: 28S ribosomal protein S29, mitochondrial [Vitis
vinifera]
gi|297745805|emb|CBI15861.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 34/238 (14%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELG---GITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
S++D + E +A+ G G+ + F E + S++L+R L+L + +
Sbjct: 112 SRKDTCTYMKFSTEGLNAVLPEGLTAGMVKEFEESRR----SALLVRRSFLDLRDNFRRI 167
Query: 61 TN-----FDRPSPR----FVLYGEHGVGKSMALVYALQYAHENNYLLVHIP----WVLRW 107
+ D P+ +L G GKS+AL + +A + +L+ ++P W
Sbjct: 168 VDPPLRSSDGKGPKVLKQIILDGPVSSGKSIALAMLVHWARDEGWLVFYVPRGRDWTHGG 227
Query: 108 FAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQN-------TKWLEDP-RLTTSQEYVWS 159
F Y + G D + AA L+ F K+N T + DP L W
Sbjct: 228 FFYKN------PQTGFWDTPVQAANILQDFLKRNESHLKQLTCQISDPIPLGEGAGVGWM 281
Query: 160 PREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFF 217
S A + L + T + + V V+ K+LS + VD YNS+F
Sbjct: 282 KGVDSMAMPEGSTLYDLVQTGMSHTHAAVGVVVRLRKELSLVKDIPVLIAVDQYNSWF 339
>gi|322701085|gb|EFY92836.1| ribosomal protein DAP3, putative [Metarhizium acridum CQMa 102]
Length = 464
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 10 KFYTLPDEVRSAIFELGGITRVFNEQT-QIFNESSILIRNCMLELVGYLKSMTNFDRPSP 68
K + LPD+V + +L + QT +F L+R ++L+ ++ + +
Sbjct: 115 KMFALPDKV---VDQLRALEAFKTTQTWSLFRRPHFLVREETVQLMSKMEESVE-KKDAL 170
Query: 69 RFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+ VL G GKS+AL+ ++ YA N++++VHIP
Sbjct: 171 KCVLTGSKLSGKSLALLQSMSYALMNDWVVVHIP 204
>gi|449533044|ref|XP_004173487.1| PREDICTED: uncharacterized LOC101220451, partial [Cucumis sativus]
Length = 246
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELG---GITRVFNEQTQIFNESSILIRNCMLELVGYLKSM 60
+++D ++ L E + + G G+ + F E + S++L+R L+L + +
Sbjct: 111 TRKDAGTYFKLNMEGLNEVLPEGLPMGMVKEFEESIR----SAVLVRQSFLDLRDNFRRV 166
Query: 61 TNFDRPSP-------RFVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW 107
+ SP + VL G GKS+AL +Q+A E +L++++P RW
Sbjct: 167 VDPSLLSPAGSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRW 220
>gi|302414514|ref|XP_003005089.1| 37S ribosomal protein S23 [Verticillium albo-atrum VaMs.102]
gi|261356158|gb|EEY18586.1| 37S ribosomal protein S23 [Verticillium albo-atrum VaMs.102]
Length = 449
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 4 SKQDLYKFYTLPDEVRSAIFELGGITRVFNEQT-QIFNESSILIRNCMLELVGYLKSMTN 62
SK++L + +PD++ I +L + Q +F + +L+R ++++ L
Sbjct: 95 SKENLGRIIGMPDKL---IDQLRALESFKTTQNWGLFRKPHMLVRKETVQMMERLNEAA- 150
Query: 63 FDRPSPRFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
++ + VL GE GKS+ L+ A+ YA NN++++HIP
Sbjct: 151 AEKQTLSTVLTGERISGKSLLLMQAMSYALLNNWVVIHIP 190
>gi|428185590|gb|EKX54442.1| hypothetical protein GUITHDRAFT_150014 [Guillardia theta CCMP2712]
Length = 484
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 114/283 (40%), Gaps = 37/283 (13%)
Query: 41 ESSILIRNCMLELVGYLKSMTNFDRP-------SPRFVLYGEHGVGKSMALVYALQYAHE 93
+ I+IR ++++ LKS+ P +P F+L G G+GKS + + + +A
Sbjct: 164 KPGIVIRKESMQIISALKSLAKSGIPKGNPHIVTPGFLLDGVPGIGKSAIINHCVHWARA 223
Query: 94 NNYLLVHIPWVLRWFAYPKEVSHSLTK--EGMVDLNIDAAMWLRHFQKQNTKWLEDPRLT 151
+ W++ + + L K G D + + + F K+ + L +
Sbjct: 224 SKE------WIVVFIPEGSRLVRGLGKFERGGDDDELGSIIVQPEFGKEILQHL----IA 273
Query: 152 TSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTEIKKLSTEGVCRTFVCVD 211
+ + K +AN+ + I+ + K A D V LF ++ L + V VD
Sbjct: 274 AHRPMLDELPLKEDANVKCSEAIDKALAS-KVARDSVKALFQVMETLKEQTKFPVLVAVD 332
Query: 212 GYNSFFAEKTNCKPEDKSKVLPSR-VTLTRSVINLVQSDWNNGAIVLALSPRANLPDRRE 270
N+ + + + K +P++ V + + + + G +VL + R + +
Sbjct: 333 EINAL--QGISFYYDHNMKQIPAKNVVIAEFFGRFLDAGYKRG-LVLGAATRTGI--FQH 387
Query: 271 SHLPLYMLKKAGFESIDPFVPIHVPELNDEEFHNLLNLYESKK 313
LP + K PI VP + +E N+L +++K
Sbjct: 388 VRLPPFHKK-----------PIQVPGMTRDEIRNMLTFQQNQK 419
>gi|254567994|ref|XP_002491107.1| Mitochondrial ribosomal protein of the small subunit, has
similarity to mammalian apoptosis mediator [Komagataella
pastoris GS115]
gi|238030904|emb|CAY68827.1| Mitochondrial ribosomal protein of the small subunit, has
similarity to mammalian apoptosis mediator [Komagataella
pastoris GS115]
Length = 519
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 133/345 (38%), Gaps = 41/345 (11%)
Query: 14 LPDEVRSAIFELGGITR-VFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVL 72
P++ A+ LG + FNE F+ L+R+ + L L+ D + R +
Sbjct: 165 FPNDSVKALHHLGSFRKGQFNEA---FSRPVSLVRDATIRLEKILQKALTTDSTNTRIAI 221
Query: 73 YGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLT-----KEGMVDLN 127
GE GVGK+ L A + ++ I + + S ++ MV
Sbjct: 222 IGESGVGKTTTLAQFQSMAKSHKAIVFAINNADNFVDGSSDFGPSALDTVEYRQPMVTRK 281
Query: 128 IDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAA-------LIEHGITR 180
+ + + + N ED + T + + R+ + ++ A ++ H
Sbjct: 282 LIKKFFKANKDELNIPLTEDIKFATVKSF--GERKGKQQDLAFKAKENTLFDVLNHA--- 336
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDK-SKVLPSRVTLT 239
V Y D+ L +LS V F+ VD + +F + K +++ R +
Sbjct: 337 VHYRGDLSHCLHFTFSQLSASNVP-VFLTVDNFTAFTQNPITAYRDTKNNRIYFDRFEIP 395
Query: 240 RSVINLVQSD--WNNGAIVLALSPRANLPDR------RESHLPLYMLK------KAGFES 285
++ ++ D +N G ++++ S + D +S+ P A ++
Sbjct: 396 SLILRYIRGDDKFNKGGVLISSSGKHKSNDTLSVALGDKSYEPYAKFGDFDRKLAATLQN 455
Query: 286 IDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIAFLTKR 330
++ F VP LN EE +LL Y + + +E +EI F + R
Sbjct: 456 LEKF---EVPSLNKEEVGSLLQYYLDQGIIH-NEKTDEINFESFR 496
>gi|322706942|gb|EFY98521.1| ribosomal protein DAP3 [Metarhizium anisopliae ARSEF 23]
Length = 464
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 10 KFYTLPDEVRSAIFELGGITRVFNEQT-QIFNESSILIRNCMLELVGYLKSMTNFDRPSP 68
K + LPD+V + +L + QT +F L+R ++L+ ++ + +
Sbjct: 115 KMFALPDKV---VDQLRALEAFKTTQTWNLFRRPHFLVREETVQLMIKMEKSIE-KKEAL 170
Query: 69 RFVLYGEHGVGKSMALVYALQYAHENNYLLVHIP 102
+ VL G GKS+AL+ ++ YA N++++VHIP
Sbjct: 171 KCVLTGSKLSGKSLALLQSMSYALMNDWVVVHIP 204
>gi|328352366|emb|CCA38765.1| 37S ribosomal protein S23, mitochondrial [Komagataella pastoris CBS
7435]
Length = 430
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 131/341 (38%), Gaps = 41/341 (12%)
Query: 14 LPDEVRSAIFELGGITR-VFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVL 72
P++ A+ LG + FNE F+ L+R+ + L L+ D + R +
Sbjct: 76 FPNDSVKALHHLGSFRKGQFNEA---FSRPVSLVRDATIRLEKILQKALTTDSTNTRIAI 132
Query: 73 YGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRWFAYPKEVSHSLT-----KEGMVDLN 127
GE GVGK+ L A + ++ I + + S ++ MV
Sbjct: 133 IGESGVGKTTTLAQFQSMAKSHKAIVFAINNADNFVDGSSDFGPSALDTVEYRQPMVTRK 192
Query: 128 IDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAA-------LIEHGITR 180
+ + + + N ED + T + + R+ + ++ A ++ H
Sbjct: 193 LIKKFFKANKDELNIPLTEDIKFATVKSF--GERKGKQQDLAFKAKENTLFDVLNHA--- 247
Query: 181 VKYASDVVDVLFTEIKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDK-SKVLPSRVTLT 239
V Y D+ L +LS V F+ VD + +F + K +++ R +
Sbjct: 248 VHYRGDLSHCLHFTFSQLSASNVP-VFLTVDNFTAFTQNPITAYRDTKNNRIYFDRFEIP 306
Query: 240 RSVINLVQSD--WNNGAIVLALSPRANLPDR------RESHLPLYMLKK------AGFES 285
++ ++ D +N G ++++ S + D +S+ P A ++
Sbjct: 307 SLILRYIRGDDKFNKGGVLISSSGKHKSNDTLSVALGDKSYEPYAKFGDFDRKLAATLQN 366
Query: 286 IDPFVPIHVPELNDEEFHNLLNLYESKKWLQTSEGREEIAF 326
++ F VP LN EE +LL Y + + +E +EI F
Sbjct: 367 LEKF---EVPSLNKEEVGSLLQYYLDQGIIH-NEKTDEINF 403
>gi|380026385|ref|XP_003696932.1| PREDICTED: uncharacterized protein LOC100869645 [Apis florea]
Length = 106
Score = 39.3 bits (90), Expect = 2.9, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 KHSKQDLYKFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLK 58
+H + L K YT+P +++S + + +T +QT IF E IL+R +EL+ YL+
Sbjct: 34 EHDESCLSKIYTVPSDIKSLLMK--DMTIELKKQTTIFRELGILVRRPAIELISYLE 88
>gi|157865803|ref|XP_001681608.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68124906|emb|CAJ02363.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 467
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 23/195 (11%)
Query: 38 IFNESSILIRNCMLELVGY-------LKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQY 90
++ + S L+ NC ++ + + L+S+TN P F++ G G GKS L A+ Y
Sbjct: 79 LYRKQSHLL-NCFIDKLPFWQSKEKALRSLTN---GRPGFIMDGPTGCGKSALLCQAVHY 134
Query: 91 AHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRL 150
A + + ++I W + + S G D A +LR + N L+ L
Sbjct: 135 ARSRDIITLYIANAKAW-THGEWCWPSTILPGFFDAPDAAREFLRTVAEANGSLLQAWEL 193
Query: 151 TTSQEYVWSPREKSEANI-PLAALIEHGITRVKYASD-----VVDVLFTEIKKLSTEGVC 204
+ + + P E+ E L L E G V AS + F EI+ T+ +
Sbjct: 194 RVTPQDL--PLEQGEKQPRSLYDLCEWGHRAVAPASIDRQSVCIKFFFDEIRAEKTKPI- 250
Query: 205 RTFVCVDGYNSFFAE 219
+ VDG+N F E
Sbjct: 251 --IIAVDGWNLFSHE 263
>gi|398011839|ref|XP_003859114.1| unnamed protein product [Leishmania donovani]
gi|322497327|emb|CBZ32402.1| unnamed protein product [Leishmania donovani]
Length = 498
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 23/195 (11%)
Query: 38 IFNESSILIRNCMLELVGY-------LKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQY 90
++ + S L+ NC ++ + + L+S+TN P F++ G G GKS L A+ Y
Sbjct: 110 LYRKQSHLL-NCFIDKLPFWQSKERALRSLTN---GRPGFIMDGPTGCGKSALLCQAVHY 165
Query: 91 AHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRL 150
A + + ++I W + + S G D A +LR + N L+ L
Sbjct: 166 ARSRDIITLYIANAKAW-THGEWCWPSTILPGFFDAPDAAREFLRTVAEANRSLLQAWEL 224
Query: 151 TTSQEYVWSPREKSEANI-PLAALIEHGITRVKYASD-----VVDVLFTEIKKLSTEGVC 204
+ + + P E+ E L L E G V AS + F EI+ T+ +
Sbjct: 225 RVTPQDL--PLEQGEKQPRSLYDLCEWGHRAVSPASIDRQSVCIKFFFDEIRAEKTKPIV 282
Query: 205 RTFVCVDGYNSFFAE 219
+ VDG+N F E
Sbjct: 283 ---IAVDGWNLFSHE 294
>gi|339897078|ref|XP_001463939.2| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321399048|emb|CAM66313.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 498
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 23/195 (11%)
Query: 38 IFNESSILIRNCMLELVGY-------LKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQY 90
++ + S L+ NC ++ + + L+S+TN P F++ G G GKS L A+ Y
Sbjct: 110 LYRKQSHLL-NCFIDKLPFWQSKERALRSLTN---GRPGFIMDGPTGCGKSALLCQAVHY 165
Query: 91 AHENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNIDAAMWLRHFQKQNTKWLEDPRL 150
A + + ++I W + + S G D A +LR + N L+ L
Sbjct: 166 ARSRDIITLYIANAKAW-THGEWCWPSTILPGFFDAPDAAREFLRTVAEANRSLLQAWEL 224
Query: 151 TTSQEYVWSPREKSEANI-PLAALIEHGITRVKYASD-----VVDVLFTEIKKLSTEGVC 204
+ + + P E+ E L L E G V AS + F EI+ T+ +
Sbjct: 225 RVTPQDL--PLEQGEKQPRSLYDLCEWGHRAVAPASIDRQSVCIKFFFDEIRAEKTKPIV 282
Query: 205 RTFVCVDGYNSFFAE 219
+ VDG+N F E
Sbjct: 283 ---IAVDGWNLFSHE 294
>gi|323342137|ref|ZP_08082370.1| hypothetical protein HMPREF0357_10550 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|336066250|ref|YP_004561108.1| primosomal protein DnaI [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|322464562|gb|EFY09755.1| hypothetical protein HMPREF0357_10550 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|334296196|dbj|BAK32067.1| primosomal protein DnaI [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 306
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 42 SSILIRNCMLELVGYLKSMTNF-DRPSPRFVLYGEHGVGKS-MALVYALQYAHEN-NYLL 98
S I I N +G L+ M NF + P + LYG G+GKS ++ + +A N
Sbjct: 129 SKISIENENPNYLGVLEDMINFVENDKPGYYLYGNLGIGKSYLSACVSNDFAKSGRNVAF 188
Query: 99 VHIPWVL----RWFAYPKEVSHSLTK 120
+H+P ++ + F +P E+ ++L K
Sbjct: 189 IHVPKLMSHLKQLFTHPNEMEYTLRK 214
>gi|237829921|ref|XP_002364258.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211961922|gb|EEA97117.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221507126|gb|EEE32730.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 711
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 70 FVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW 107
F+L G GVGKS L Y + +A ENN+L+V+ P R+
Sbjct: 366 FLLDGHRGVGKSCVLNYLIPWARENNWLVVYEPLPSRY 403
>gi|221487329|gb|EEE25561.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 711
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 70 FVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW 107
F+L G GVGKS L Y + +A ENN+L+V+ P R+
Sbjct: 366 FLLDGHRGVGKSCVLNYLIPWARENNWLVVYEPLPSRY 403
>gi|401411151|ref|XP_003885023.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325119442|emb|CBZ54995.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 873
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 70 FVLYGEHGVGKSMALVYALQYAHENNYLLVHIPWVLRW 107
F+L G GVGKS L Y + +A ENN+L+V+ P R+
Sbjct: 524 FLLDGHRGVGKSCVLNYLVPWARENNWLVVYEPLPSRY 561
>gi|356568953|ref|XP_003552672.1| PREDICTED: beta-hexosaminidase subunit B2-like [Glycine max]
Length = 565
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 68 PRFVLYGEHGVG---KSMALVYALQYAHENNYLLVH--IPWVLRWFAYPKEVSHSLTKEG 122
P+ +++ G G K +A + Y+++ + L H +PW + A P + H+ +++
Sbjct: 418 PKTIVHNWLGPGVCPKVVAKGFRCIYSNQGVWYLDHLDVPWDEVYTAEPLQGIHTASEQE 477
Query: 123 MVDLNIDAAMWLRHFQKQNTKWLEDPRLTTSQEYVWSPREKSEANIPLAAL 173
+V + + MW N + PR + E +WS R+ + NI L AL
Sbjct: 478 LV-IGGEVCMWGETADTSNVQQTIWPRAAAAAERLWSQRDSTSQNITLIAL 527
>gi|19112635|ref|NP_595843.1| mitochondrial ribosomal protein subunit S23 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582205|sp|O59677.1|RT23_SCHPO RecName: Full=37S ribosomal protein S23, mitochondrial; Flags:
Precursor
gi|3006151|emb|CAA18392.1| mitochondrial ribosomal protein subunit S23 (predicted)
[Schizosaccharomyces pombe]
Length = 476
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 10 KFYTLPDEVRSAIFELGGITRVFNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPR 69
K + +P+E+ + + G + + + F +S+L R ELV L+ + R
Sbjct: 137 KMFKIPEELLNKLNGFGALEKQ-KKSFSFFTSASLLHRKITTELVNVLQRSKDQGTKDGR 195
Query: 70 FVLYGEHGVGKSMALVYALQYA 91
F+L G G G+S+AL+ A +A
Sbjct: 196 FLLDGAPGSGRSIALIQAELFA 217
>gi|365765806|gb|EHN07312.1| Rsm23p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 447
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 137/328 (41%), Gaps = 74/328 (22%)
Query: 32 FNEQTQIFNESSILIRNCMLELVGYLKSMTNFDRPSPRFVLYGEHGVGKSMALVYALQYA 91
FNE +F + L+R +LK + + P +F++ GE GVGK++ L A YA
Sbjct: 112 FNE---LFQKPVCLVREDATN--SFLKKLVS--HPVKKFIITGEPGVGKTVLLSQAHAYA 164
Query: 92 HENNYLLVHIPWVLRWFAYPKEVSHSLTKEGMVDLNID-------AAMWLRHFQKQNTKW 144
++ ++++I +YP+ L G D + D M+L+ ++ K
Sbjct: 165 VDSKQIIINI-------SYPE-----LFLNGRNDFSYDDDLKLFIQPMYLKKLIRKILKA 212
Query: 145 LEDPRLTTSQEYVWSPREKSEANIPLAALIEHGITRVKYASDVVDVLFTE---------- 194
DP L S E + + S AN P A ++ +T K + V+D+L
Sbjct: 213 -NDPALLKSIE-LSKDYKFSNAN-PKNASVKPFVTLNKTKNTVLDLLSVMTHPHNRGKLM 269
Query: 195 ---IKKLSTEGVCRTFVCVDGYNSFFAEKTNCKPEDKSKVLPS-RVTLTRSVINLV--QS 248
I +LS + VD ++ + ++K + S + + + +++++ ++
Sbjct: 270 KAIIDELSVQSKVPIMFTVDNFSKVLTTAYSAYRNTENKQIYSLDLQMGKLMMDIISGET 329
Query: 249 DWNNG--AIVLALSPRANLPDRRESHLPLYMLKKAGFESIDPFVP--------------- 291
+ NG + +LA+S DR LP+ + G +DP+V
Sbjct: 330 KFANGESSTILAISGV----DRTNKTLPVAL----GKXPVDPYVTRYHYEPKFVELLQKG 381
Query: 292 ----IHVPELNDEEFHNLLNLYESKKWL 315
VP+LN +E + L++ Y+ L
Sbjct: 382 NVTEFEVPKLNKQEVNELIDYYKQSNVL 409
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,368,077,422
Number of Sequences: 23463169
Number of extensions: 218904485
Number of successful extensions: 506711
Number of sequences better than 100.0: 252
Number of HSP's better than 100.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 505999
Number of HSP's gapped (non-prelim): 265
length of query: 342
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 199
effective length of database: 9,003,962,200
effective search space: 1791788477800
effective search space used: 1791788477800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)