Query psy3262
Match_columns 103
No_of_seqs 113 out of 1300
Neff 9.7
Searched_HMMs 46136
Date Fri Aug 16 20:33:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3262.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/3262hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03191 GST_C_Zeta GST_C famil 99.9 1.5E-21 3.3E-26 114.8 11.8 103 1-103 3-111 (121)
2 cd03189 GST_C_GTT1_like GST_C 99.9 1.8E-21 3.8E-26 114.1 9.0 101 1-103 7-119 (119)
3 cd03188 GST_C_Beta GST_C famil 99.9 4.3E-21 9.3E-26 111.4 9.5 101 1-103 2-108 (114)
4 cd03180 GST_C_2 GST_C family, 99.9 1E-20 2.2E-25 109.2 10.6 101 1-103 2-108 (110)
5 cd03178 GST_C_Ure2p_like GST_C 99.8 2.5E-20 5.5E-25 108.2 9.6 101 1-103 1-106 (113)
6 cd03186 GST_C_SspA GST_N famil 99.8 2.2E-20 4.8E-25 107.7 9.0 98 1-103 3-101 (107)
7 cd03196 GST_C_5 GST_C family, 99.8 1.1E-20 2.3E-25 110.7 7.3 101 1-103 6-109 (115)
8 cd03177 GST_C_Delta_Epsilon GS 99.8 1.6E-20 3.5E-25 110.1 7.6 101 1-103 2-104 (118)
9 cd03182 GST_C_GTT2_like GST_C 99.8 6.1E-20 1.3E-24 107.2 8.5 101 1-103 4-115 (117)
10 TIGR01262 maiA maleylacetoacet 99.8 4.8E-19 1E-23 112.7 11.0 103 1-103 88-196 (210)
11 cd03187 GST_C_Phi GST_C family 99.8 3.5E-19 7.5E-24 104.0 9.5 101 1-103 2-112 (118)
12 cd03206 GST_C_7 GST_C family, 99.8 2.8E-19 6.1E-24 102.1 8.2 97 5-103 1-98 (100)
13 cd03183 GST_C_Theta GST_C fami 99.8 7.1E-19 1.5E-23 104.0 9.9 102 1-103 1-114 (126)
14 cd03179 GST_C_1 GST_C family, 99.8 4.3E-19 9.4E-24 101.7 8.1 98 1-100 2-105 (105)
15 cd03181 GST_C_EFB1gamma GST_C 99.8 6.6E-19 1.4E-23 103.6 8.9 101 1-103 1-108 (123)
16 cd03185 GST_C_Tau GST_C family 99.8 7.1E-19 1.5E-23 103.9 8.3 98 1-103 3-107 (126)
17 cd03195 GST_C_4 GST_C family, 99.8 2.5E-19 5.5E-24 104.7 6.1 99 1-103 3-105 (114)
18 cd03184 GST_C_Omega GST_C fami 99.8 6.2E-19 1.4E-23 104.3 7.6 98 1-103 2-105 (124)
19 PRK10542 glutathionine S-trans 99.8 2.7E-18 5.8E-23 108.6 9.1 100 1-103 90-189 (201)
20 cd03190 GST_C_ECM4_like GST_C 99.8 4.7E-18 1E-22 102.8 9.3 98 2-103 5-110 (142)
21 PRK13972 GSH-dependent disulfi 99.8 5.2E-18 1.1E-22 108.5 8.5 101 1-103 93-197 (215)
22 cd03207 GST_C_8 GST_C family, 99.8 1.4E-18 3E-23 99.5 5.3 93 6-103 2-94 (103)
23 PF00043 GST_C: Glutathione S- 99.8 1E-17 2.3E-22 94.4 8.1 71 31-103 23-95 (95)
24 KOG0868|consensus 99.7 2.9E-17 6.2E-22 101.1 8.6 103 1-103 94-199 (217)
25 COG0625 Gst Glutathione S-tran 99.7 5.5E-17 1.2E-21 103.5 9.8 101 1-103 91-196 (211)
26 cd03209 GST_C_Mu GST_C family, 99.7 8.7E-17 1.9E-21 94.7 8.4 99 1-103 2-101 (121)
27 PRK09481 sspA stringent starva 99.7 9.7E-17 2.1E-21 102.5 8.9 98 1-103 95-194 (211)
28 cd03204 GST_C_GDAP1 GST_C fami 99.7 1.7E-16 3.6E-21 92.3 8.6 73 31-103 24-109 (111)
29 cd03210 GST_C_Pi GST_C family, 99.7 1.4E-16 3E-21 94.5 8.4 100 1-103 3-104 (126)
30 PLN02395 glutathione S-transfe 99.7 3.1E-16 6.7E-21 100.1 10.1 101 1-103 91-202 (215)
31 cd00299 GST_C_family Glutathio 99.7 4.3E-16 9.4E-21 87.9 7.8 93 5-99 1-100 (100)
32 cd03203 GST_C_Lambda GST_C fam 99.7 4.7E-16 1E-20 91.6 7.7 92 1-103 4-103 (120)
33 cd03194 GST_C_3 GST_C family, 99.7 3.7E-16 7.9E-21 91.4 7.1 97 4-103 2-106 (114)
34 cd03208 GST_C_Alpha GST_C fami 99.7 6.6E-16 1.4E-20 92.9 7.6 69 35-103 38-107 (137)
35 PLN02473 glutathione S-transfe 99.7 1.6E-15 3.4E-20 96.9 9.4 101 1-103 92-203 (214)
36 PRK15113 glutathione S-transfe 99.6 8.3E-16 1.8E-20 98.4 7.9 99 1-103 98-200 (214)
37 cd03192 GST_C_Sigma_like GST_C 99.6 1.1E-15 2.4E-20 87.5 7.4 98 1-99 2-104 (104)
38 PF14497 GST_C_3: Glutathione 99.6 6.1E-16 1.3E-20 88.2 6.0 93 1-101 5-99 (99)
39 cd03198 GST_C_CLIC GST_C famil 99.6 2.7E-15 5.9E-20 89.8 7.7 73 31-103 24-116 (134)
40 PRK11752 putative S-transferas 99.6 3.7E-15 8.1E-20 98.3 9.1 100 1-103 139-250 (264)
41 PF13410 GST_C_2: Glutathione 99.6 3.3E-15 7.2E-20 79.8 7.4 65 32-98 2-69 (69)
42 PTZ00057 glutathione s-transfe 99.6 4.2E-15 9E-20 94.6 8.1 69 35-103 122-191 (205)
43 cd03200 GST_C_JTV1 GST_C famil 99.6 4.6E-15 9.9E-20 84.3 6.7 60 38-102 37-96 (96)
44 cd03201 GST_C_DHAR GST_C famil 99.6 1.9E-14 4.2E-19 84.9 8.4 68 35-103 29-102 (121)
45 PRK10357 putative glutathione 99.6 2.1E-14 4.6E-19 90.9 8.2 98 2-103 87-192 (202)
46 cd03202 GST_C_etherase_LigE GS 99.5 4.7E-14 1E-18 83.5 7.8 67 34-102 56-124 (124)
47 PRK10387 glutaredoxin 2; Provi 99.5 2.1E-14 4.5E-19 91.3 6.6 63 36-103 142-205 (210)
48 cd03193 GST_C_Metaxin GST_C fa 99.5 7.2E-14 1.6E-18 77.9 7.7 66 33-100 16-88 (88)
49 KOG0867|consensus 99.5 7.9E-14 1.7E-18 90.2 7.8 101 1-103 92-201 (226)
50 cd03205 GST_C_6 GST_C family, 99.4 4.5E-13 9.7E-18 76.1 6.6 89 6-99 2-98 (98)
51 TIGR00862 O-ClC intracellular 99.4 8.8E-13 1.9E-17 85.7 8.5 70 34-103 121-212 (236)
52 PLN02378 glutathione S-transfe 99.4 9.6E-13 2.1E-17 84.3 7.4 67 37-103 119-191 (213)
53 KOG0406|consensus 99.4 2.9E-12 6.2E-17 82.5 8.3 100 1-103 96-203 (231)
54 TIGR02182 GRXB Glutaredoxin, G 99.4 7.7E-13 1.7E-17 84.5 5.5 63 36-103 141-204 (209)
55 PLN02817 glutathione dehydroge 99.4 3.9E-12 8.4E-17 84.0 7.9 64 39-103 174-243 (265)
56 PLN02907 glutamate-tRNA ligase 99.3 9E-12 1.9E-16 91.5 8.3 62 40-103 94-158 (722)
57 cd03197 GST_C_mPGES2 GST_C fam 99.3 8.7E-12 1.9E-16 75.6 6.6 62 39-101 82-145 (149)
58 cd03212 GST_C_Metaxin1_3 GST_C 99.3 1.9E-11 4.2E-16 73.6 7.0 67 33-101 61-134 (137)
59 cd03211 GST_C_Metaxin2 GST_C f 99.3 1.3E-11 2.9E-16 73.3 5.3 65 34-100 55-126 (126)
60 PF14834 GST_C_4: Glutathione 99.1 1.7E-10 3.6E-15 66.7 6.0 99 1-103 4-106 (117)
61 KOG4420|consensus 99.1 4.2E-10 9.1E-15 73.3 7.0 70 34-103 203-279 (325)
62 KOG1695|consensus 98.9 4.3E-09 9.3E-14 67.2 6.7 68 36-103 123-192 (206)
63 COG0435 ECM4 Predicted glutath 98.8 1.1E-08 2.4E-13 67.3 5.8 71 31-103 200-278 (324)
64 KOG2903|consensus 98.6 1.8E-08 4E-13 65.8 2.2 70 32-101 199-277 (319)
65 KOG1422|consensus 98.4 9.6E-07 2.1E-11 56.1 5.1 65 38-102 125-196 (221)
66 KOG4244|consensus 98.2 2.8E-06 6.1E-11 55.8 4.5 63 37-101 204-272 (281)
67 PF04399 Glutaredoxin2_C: Glut 97.7 0.00019 4.1E-09 43.0 5.9 62 35-101 58-120 (132)
68 KOG3027|consensus 97.7 0.0002 4.4E-09 45.8 6.0 65 35-101 176-247 (257)
69 cd03199 GST_C_GRX2 GST_C famil 97.6 0.00051 1.1E-08 40.9 6.7 61 37-102 61-122 (128)
70 KOG3028|consensus 97.2 0.0023 5.1E-08 43.2 7.2 63 37-101 164-233 (313)
71 KOG3029|consensus 97.2 0.001 2.2E-08 44.6 4.8 56 45-101 297-354 (370)
72 KOG1147|consensus 96.4 0.0041 8.9E-08 45.2 3.4 58 38-97 90-150 (712)
73 PF11801 Tom37_C: Tom37 C-term 92.1 0.98 2.1E-05 28.2 6.1 41 41-81 113-155 (168)
74 COG2999 GrxB Glutaredoxin 2 [P 91.3 0.82 1.8E-05 29.1 5.0 60 37-101 143-203 (215)
75 KOG1668|consensus 73.4 3.5 7.6E-05 27.1 2.3 52 42-101 10-63 (231)
76 PF07056 DUF1335: Protein of u 61.5 14 0.00031 22.0 3.0 32 38-72 42-73 (131)
77 cd06891 PX_Vps17p The phosphoi 47.5 14 0.00031 22.4 1.5 14 90-103 112-125 (140)
78 PF04827 Plant_tran: Plant tra 43.9 54 0.0012 21.3 3.8 46 32-77 148-193 (205)
79 PF10990 DUF2809: Protein of u 43.6 15 0.00033 20.5 1.2 18 57-74 70-87 (91)
80 PF00392 GntR: Bacterial regul 43.3 36 0.00078 17.1 2.6 29 43-73 4-33 (64)
81 cd07985 LPLAT_GPAT Lysophospho 40.9 47 0.001 22.1 3.3 35 44-78 10-44 (235)
82 cd08200 catalase_peroxidase_2 40.9 83 0.0018 21.8 4.5 40 40-79 73-112 (297)
83 COG3433 Aryl carrier domain [S 40.2 62 0.0013 17.4 3.5 33 70-102 32-69 (74)
84 COG5625 Predicted transcriptio 37.1 85 0.0019 18.1 3.7 27 29-55 84-110 (113)
85 PHA02776 E7 protein; Provision 37.1 12 0.00026 21.4 0.1 14 60-73 1-14 (101)
86 PF01553 Acyltransferase: Acyl 33.8 37 0.0008 19.3 1.8 21 57-77 15-35 (132)
87 PF12897 Aminotran_MocR: Alani 32.3 1.5E+02 0.0032 21.7 4.7 48 35-84 314-370 (425)
88 cd08533 SAM_PNT-ETS-1,2 Steril 30.0 47 0.001 17.7 1.7 16 2-17 9-24 (71)
89 cd08540 SAM_PNT-ERG Sterile al 29.8 44 0.00095 18.0 1.5 16 2-17 10-25 (75)
90 cd08535 SAM_PNT-Tel_Yan Steril 29.4 53 0.0011 17.3 1.8 16 2-17 8-23 (68)
91 cd08539 SAM_PNT-ESE-3-like Ste 29.2 79 0.0017 17.1 2.4 17 2-18 10-28 (74)
92 cd08542 SAM_PNT-ETS-1 Sterile 28.7 46 0.001 18.6 1.5 16 2-17 24-39 (88)
93 cd08531 SAM_PNT-ERG_FLI-1 Ster 28.5 53 0.0012 17.7 1.7 16 2-17 10-25 (75)
94 PF04405 ScdA_N: Domain of Unk 26.5 98 0.0021 15.6 2.8 14 58-71 25-38 (56)
95 PF04763 DUF562: Protein of un 26.0 48 0.001 20.2 1.4 16 58-73 102-117 (146)
96 PF00527 E7: E7 protein, Early 25.0 24 0.00052 19.8 0.0 12 62-73 1-12 (92)
97 PRK12276 putative heme peroxid 23.9 43 0.00094 22.4 1.0 23 50-73 223-245 (248)
98 cd08543 SAM_PNT-ETS-2 Sterile 23.4 66 0.0014 18.0 1.6 16 2-17 24-39 (89)
99 cd00649 catalase_peroxidase_1 22.8 2.9E+02 0.0063 20.2 4.9 38 38-81 109-146 (409)
100 cd08536 SAM_PNT-Mae Sterile al 22.5 84 0.0018 16.4 1.8 16 2-17 7-22 (66)
101 PF13677 MotB_plug: Membrane M 22.5 91 0.002 15.7 1.9 14 65-78 19-32 (58)
102 PF09849 DUF2076: Uncharacteri 22.4 1.8E+02 0.0039 19.6 3.7 20 33-52 52-71 (247)
103 COG0376 KatG Catalase (peroxid 22.3 98 0.0021 23.5 2.6 30 39-74 507-536 (730)
104 COG3253 ywfI Predicted heme pe 22.1 71 0.0015 21.2 1.7 21 50-71 206-226 (230)
105 PF00141 peroxidase: Peroxidas 22.0 1.8E+02 0.0039 19.1 3.6 17 63-79 72-88 (230)
106 PF09340 NuA4: Histone acetylt 22.0 39 0.00084 18.4 0.4 24 38-61 11-34 (80)
107 cd08541 SAM_PNT-FLI-1 Sterile 21.8 77 0.0017 17.8 1.6 16 2-17 22-37 (91)
108 PF10675 DUF2489: Protein of u 21.8 1.5E+02 0.0032 17.8 2.9 18 86-103 76-93 (131)
109 KOG3284|consensus 20.9 1.3E+02 0.0028 19.5 2.6 36 65-102 149-184 (213)
110 COG4041 Predicted membrane pro 20.6 2.2E+02 0.0047 17.4 3.4 33 48-80 48-80 (171)
111 PF13227 DUF4035: Protein of u 20.6 68 0.0015 16.1 1.1 12 62-73 30-41 (53)
112 cd00314 plant_peroxidase_like 20.3 1.8E+02 0.0038 19.2 3.4 31 42-76 61-91 (255)
113 PF12523 DUF3725: Protein of u 20.1 1.3E+02 0.0027 16.0 2.1 28 58-85 27-54 (74)
No 1
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=99.88 E-value=1.5e-21 Score=114.78 Aligned_cols=103 Identities=51% Similarity=0.974 Sum_probs=82.6
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhc----C--hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYV----G--EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIP 74 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~ 74 (103)
+|+++++|+.|+++++++.+...++... + .+...+...+.+.+.++.+|++|++++++|++|+++|+|||++++
T Consensus 3 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~ 82 (121)
T cd03191 3 KRARVRALALIIACDIHPLNNLRVLKYLTEELGLDEEAKNAWYRHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVP 82 (121)
T ss_pred hHHHHHHHHHHHHccCCccccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHH
Confidence 5899999999999999987433333221 2 223444556778999999999998532479999999999999999
Q ss_pred HHHHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 75 QVFNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 75 ~~~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
.+.+....+++++.+|+|++|++++.+||
T Consensus 83 ~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 111 (121)
T cd03191 83 QVYNARRFGVDLSPYPTIARINEACLELP 111 (121)
T ss_pred HHHHHHHhCCCcccCcHHHHHHHHHHhCh
Confidence 99988777777788999999999999987
No 2
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=99.87 E-value=1.8e-21 Score=114.10 Aligned_cols=101 Identities=18% Similarity=0.191 Sum_probs=81.6
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHH-hhhcCh-----------HHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchh
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTV-LIYVGE-----------EKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVA 68 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~-~~~~~~-----------~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~A 68 (103)
+|+++++|+.|.++++++.+...+ ....++ +...+.....+.+.++.||++|+++ +|++|+++|+|
T Consensus 7 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~Gd~~t~A 84 (119)
T cd03189 7 EYADYLYWLHFAEGSLMPPLLLKLVLSRIGSAPPPIANKIADKVLAGFINPELKKHLDFLEDRLAKK--GYFVGDKLTAA 84 (119)
T ss_pred HHHHHHHHHHHHhHhhhHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHhHHHHHHHHHHHHHHccC--CCCCCCCCCHH
Confidence 488999999999999998753222 222111 2344556778999999999999875 89999999999
Q ss_pred HHhhHHHHHHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 69 DCCLIPQVFNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 69 Di~l~~~~~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
||++++.+.|....+.+.+.+|+|++|+++|.+||
T Consensus 85 Di~l~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 119 (119)
T cd03189 85 DIMMSFPLEAALARGPLLEKYPNIAAYLERIEARP 119 (119)
T ss_pred HHHHHHHHHHHHHcCcccccCchHHHHHHHHhcCC
Confidence 99999999888766656788999999999999998
No 3
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=99.86 E-value=4.3e-21 Score=111.41 Aligned_cols=101 Identities=19% Similarity=0.210 Sum_probs=82.3
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhh--cC----hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIY--VG----EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIP 74 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~ 74 (103)
+|+++++|+.|.++++++.+...+... .. .+...+...+.+.+.++.+|+.|.++ +|++|+++|+|||++++
T Consensus 2 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~--~~l~G~~~t~aDi~~~~ 79 (114)
T cd03188 2 ERARLLEWLNFLSSELHKAFGPLFYPARWATDEAAQEEVKAAARERLAARLAYLDAQLAGG--PYLLGDRFSVADAYLFV 79 (114)
T ss_pred cHHHHHHHHHHHhhhhchhhhhcccccccccChhhHHHHHHHHHHHHHHHHHHHHHHhcCC--CeeeCCCcchHHHHHHH
Confidence 589999999999999998763222221 11 13445667788999999999999865 89999999999999999
Q ss_pred HHHHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 75 QVFNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 75 ~~~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
.+.++...+.+++++|++.+|+++|.++|
T Consensus 80 ~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 108 (114)
T cd03188 80 VLRWAPGVGLDLSDWPNLAAYLARVAARP 108 (114)
T ss_pred HHHHHhhcCCChhhChHHHHHHHHHHhCH
Confidence 99888766666678999999999999987
No 4
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.86 E-value=1e-20 Score=109.25 Aligned_cols=101 Identities=14% Similarity=0.140 Sum_probs=80.4
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhh-c-C----hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIY-V-G----EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIP 74 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~-~-~----~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~ 74 (103)
+|+++++|+.|.++.+++.+...+... . + .+...+...+.+.+.++.+|++|.++ +|++|+++|+|||++++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lE~~L~~~--~~l~g~~~t~aDi~~~~ 79 (110)
T cd03180 2 ARARADRWMDWQTSTLNPAFRYAFWGLVRTPPEQRDPAAIAASLAAWAKLMAILDAQLAGR--PYLAGDRFTLADIPLGC 79 (110)
T ss_pred chhHHHHHHHHHHhhcChHHHHHHHHHHcCCcccCCHHHHHHHHHHHHHHHHHHHHHhCCC--CcccCCCCCHHHHHHHH
Confidence 589999999999999998764322211 1 1 23445567788999999999999875 89999999999999998
Q ss_pred HHHHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 75 QVFNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 75 ~~~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
++......+.+...+|+|++|+++|.++|
T Consensus 80 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 108 (110)
T cd03180 80 SAYRWFELPIERPPLPHLERWYARLRARP 108 (110)
T ss_pred HHHHHHHcccccccCchHHHHHHHHHhCC
Confidence 87544444555688999999999999997
No 5
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=99.84 E-value=2.5e-20 Score=108.22 Aligned_cols=101 Identities=22% Similarity=0.210 Sum_probs=82.5
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHh-hhcC---hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVL-IYVG---EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQV 76 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~ 76 (103)
+|+++++|++|.++.+++.+...+. .... .+...+.....+.+.++.+|+.|+++ +|++|+++|+|||++++++
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~l~~~~ 78 (113)
T cd03178 1 ERYEVLQWLFFQMGGLGPMFGQAGHFSRYAPEKIPYAIERYTNEAKRLYGVLDKRLAGR--DYLAGDEYSIADIAIFPWV 78 (113)
T ss_pred ChHHHHHHHHHHHccCCCcchHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHHccC--CcccCCCCCeeeeeHHHHH
Confidence 6899999999999999987642222 2111 23455667788999999999999865 8999999999999999999
Q ss_pred HHHHhhcCC-CCCCchHHHHHHHhhcCC
Q psy3262 77 FNARRFHVD-LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 77 ~~~~~~~~~-~~~~p~l~~~~~ri~~~p 103 (103)
.+....+.+ .+.+|++.+|+++|.++|
T Consensus 79 ~~~~~~~~~~~~~~p~l~~w~~~~~~~p 106 (113)
T cd03178 79 RRLEWIGIDDLDDFPNVKRWLDRIAARP 106 (113)
T ss_pred HHHHhccccchhhchHHHHHHHHHhhCH
Confidence 888666655 578999999999999987
No 6
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.84 E-value=2.2e-20 Score=107.72 Aligned_cols=98 Identities=17% Similarity=0.275 Sum_probs=80.2
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+||++++|+.|+++++++.+. .+... .++..+...+.+.+.++.||++|+++ +|++|+++|+|||++++.+.+..
T Consensus 3 ~ra~~r~w~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~~~~~~~~~~ 77 (107)
T cd03186 3 ARARSRLLMHRIEQDWYPLVD-TIEKG--RKKEAEKARKELRESLLALAPVFAHK--PYFMSEEFSLVDCALAPLLWRLP 77 (107)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhC--cHHHHHHHHHHHHHHHHHHHHHHcCC--CcccCCCCcHHHHHHHHHHHHHH
Confidence 589999999999998888753 23221 23445667888999999999999864 99999999999999999986665
Q ss_pred hhcCCC-CCCchHHHHHHHhhcCC
Q psy3262 81 RFHVDL-RPFPIVLRIDRELENHP 103 (103)
Q Consensus 81 ~~~~~~-~~~p~l~~~~~ri~~~p 103 (103)
..+.++ ..+|++++|+++|.+||
T Consensus 78 ~~~~~~~~~~p~l~~w~~~~~~rp 101 (107)
T cd03186 78 ALGIELPKQAKPLKDYMERVFARD 101 (107)
T ss_pred HcCCCCcccchHHHHHHHHHHCCH
Confidence 566654 57999999999999997
No 7
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.84 E-value=1.1e-20 Score=110.71 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=79.9
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+|++|++|+++.++++.+.+...++....++...+...+.+.+.++.||++|+++ +|++|+++|+|||++++++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~le~~L~~~--~yl~Gd~~tlADi~l~~~l~~~~ 83 (115)
T cd03196 6 ALKEMLALIAENDNEFKHHLDRYKYADRYPEESEEEYRQQAEAFLKDLEARLQQH--SYLLGDKPSLADWAIFPFVRQFA 83 (115)
T ss_pred HHHHHHHHHHHcchhhHHHHHhccchhhcCcccHHHHHHHHHHHHHHHHHHHccC--CccCCCCccHHHHHHHHHHHHHH
Confidence 4799999999999998876543333221111245567889999999999999975 89999999999999999887764
Q ss_pred hh---cCCCCCCchHHHHHHHhhcCC
Q psy3262 81 RF---HVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 81 ~~---~~~~~~~p~l~~~~~ri~~~p 103 (103)
.. +.+++++|+|.+|+++|.+||
T Consensus 84 ~~~~~~~~~~~~P~L~~w~~r~~~rp 109 (115)
T cd03196 84 HVDPKWFDQSPYPRLRRWLNGFLASP 109 (115)
T ss_pred HhhhcccCcccCHHHHHHHHHHHcCh
Confidence 33 334588999999999999987
No 8
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.84 E-value=1.6e-20 Score=110.09 Aligned_cols=101 Identities=20% Similarity=0.224 Sum_probs=81.0
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhh-cChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIY-VGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNA 79 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~ 79 (103)
+|+++++|++|..+.+++.+...+... ...+...+...+.+.+.++.||++|+++ +|++|+++|+|||++++++.++
T Consensus 2 ~~a~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~s~aDi~l~~~~~~~ 79 (118)
T cd03177 2 KRAIVNQRLHFDSGTLYQRLRDYYYPILFGGAEPPEEKLDKLEEALDFLETFLEGS--DYVAGDQLTIADLSLVATVSTL 79 (118)
T ss_pred hHHHHHHHHHhhhchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHccC--CeeCCCCcCHHHHHHHHHHHHH
Confidence 589999999999988887653222221 1222344556778999999999999865 8999999999999999999988
Q ss_pred Hh-hcCCCCCCchHHHHHHHhhcCC
Q psy3262 80 RR-FHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 80 ~~-~~~~~~~~p~l~~~~~ri~~~p 103 (103)
.. .+++...+|+|.+|+++|+++|
T Consensus 80 ~~~~~~~~~~~p~l~~w~~~~~~~p 104 (118)
T cd03177 80 EALLPLDLSKYPNVRAWLERLKALP 104 (118)
T ss_pred HHhcCCChhhCchHHHHHHHHHccc
Confidence 76 5666678999999999999987
No 9
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=99.83 E-value=6.1e-20 Score=107.21 Aligned_cols=101 Identities=11% Similarity=-0.004 Sum_probs=81.9
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhh--c-C-------hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIY--V-G-------EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADC 70 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~--~-~-------~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi 70 (103)
+|+++++|+.|+++++++.....+... . + .+...+...+.+.+.++.||++|+++ +|++|+++|+|||
T Consensus 4 ~ra~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~--~~l~gd~~t~aDi 81 (117)
T cd03182 4 ERAQIEMWQRRAELQGLYPIGQAFRHATPGLKPPDREEQVPEWGERSKARAADFLAYLDTRLAGS--PYVAGDRFTIADI 81 (117)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccCHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCCCCCHHHH
Confidence 489999999999988887653222111 1 1 23456667788999999999999865 8999999999999
Q ss_pred hhHHHHHHHHhhcCCC-CCCchHHHHHHHhhcCC
Q psy3262 71 CLIPQVFNARRFHVDL-RPFPIVLRIDRELENHP 103 (103)
Q Consensus 71 ~l~~~~~~~~~~~~~~-~~~p~l~~~~~ri~~~p 103 (103)
++++.+.+....+.++ ..+|+|.+|++++.+||
T Consensus 82 ~l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 115 (117)
T cd03182 82 TAFVGLDFAKVVKLRVPEELTHLRAWYDRMAARP 115 (117)
T ss_pred HHHHHhHHHHhcCCCCccccHHHHHHHHHHHhcc
Confidence 9999999987777765 68999999999999997
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.81 E-value=4.8e-19 Score=112.68 Aligned_cols=103 Identities=49% Similarity=0.895 Sum_probs=80.9
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHh----hhcC--hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVL----IYVG--EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIP 74 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~ 74 (103)
+|+++++|+.++.+++++.....+. ...+ ++...+...+.+.+.|+.+|++|.+++|+|++|+++|+|||++++
T Consensus 88 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~ 167 (210)
T TIGR01262 88 KRARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVP 167 (210)
T ss_pred HHHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHH
Confidence 4789999999998888764321121 1111 233445566779999999999999754679999999999999999
Q ss_pred HHHHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 75 QVFNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 75 ~~~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
.+.+....+.++++||+|++|+++|.+||
T Consensus 168 ~l~~~~~~~~~~~~~p~l~~~~~~~~~rp 196 (210)
T TIGR01262 168 QVYNAERFGVDLTPYPTLRRIAAALAALP 196 (210)
T ss_pred HHHHHHHcCCCcccchHHHHHHHHHhcCH
Confidence 99988776767788999999999999987
No 11
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=99.81 E-value=3.5e-19 Score=103.99 Aligned_cols=101 Identities=22% Similarity=0.205 Sum_probs=79.1
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHH----hhh-cC---hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhh
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTV----LIY-VG---EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCL 72 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~----~~~-~~---~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l 72 (103)
+|+++++|+.|.++++++.+.... +.. .+ .+...+...+.+.+.++.+|++|+++ +|++|+++|+|||++
T Consensus 2 ~ra~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~l 79 (118)
T cd03187 2 ERAIVEQWLEVESHQFDPPASALAFELVFKPMLGLPTDEAVVEENEEKLKKVLDVYEARLSKS--KYLAGDSFTLADLSH 79 (118)
T ss_pred chHHHHHHHHHHHhhcchhHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHHcccC--cccCCCCccHHHHHH
Confidence 589999999999999988753321 111 11 23444556788999999999999875 899999999999999
Q ss_pred HHHHHHHHhhc--CCCCCCchHHHHHHHhhcCC
Q psy3262 73 IPQVFNARRFH--VDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 73 ~~~~~~~~~~~--~~~~~~p~l~~~~~ri~~~p 103 (103)
++++.++...+ ..++.+|++++|++++.++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~p 112 (118)
T cd03187 80 LPYLQYLMATPFAKLFDSRPHVKAWWEDISARP 112 (118)
T ss_pred HHHHHHHHHccchhhhhcCchHHHHHHHHHhCH
Confidence 99988775322 23578999999999999987
No 12
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.81 E-value=2.8e-19 Score=102.10 Aligned_cols=97 Identities=30% Similarity=0.332 Sum_probs=76.9
Q ss_pred HHHHHHHHHcCCCCCchHHHhhh-cChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhc
Q psy3262 5 VREICEVIASGIQPLQNLTVLIY-VGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFH 83 (103)
Q Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~ 83 (103)
+++|++|.++++.+......+.. ...+...+.....+.+.++.+|++|+++ +|++|+++|+|||++++++.+....+
T Consensus 1 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~aDi~~~~~~~~~~~~~ 78 (100)
T cd03206 1 VQRWLSVAAGEIANGPAAARLITLFGAPLDKETAIARAHRLLRLLEEHLAGR--DWLAGDRPTIADVAVYPYVALAPEGG 78 (100)
T ss_pred CceehhhhhhhcccchhHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHccC--CccCCCCCCHHHHHHHHHHHHHhccC
Confidence 36899999999987543333322 2222244566788999999999999876 89999999999999999988765555
Q ss_pred CCCCCCchHHHHHHHhhcCC
Q psy3262 84 VDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 84 ~~~~~~p~l~~~~~ri~~~p 103 (103)
.+++++|+|.+|+++|.++|
T Consensus 79 ~~~~~~p~l~~~~~~~~~~p 98 (100)
T cd03206 79 VDLEDYPAIRRWLARIEALP 98 (100)
T ss_pred CChhhCcHHHHHHHHHHhCc
Confidence 56688999999999999997
No 13
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=99.80 E-value=7.1e-19 Score=104.05 Aligned_cols=102 Identities=16% Similarity=0.214 Sum_probs=80.3
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhh-----hcC----hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHh
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLI-----YVG----EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCC 71 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~ 71 (103)
+|+++++|+.|..+++++.+...+.. ... ++...+...+.+.+.++.+|+++.+. ++|++|+++|+|||+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~-~~~l~Gd~~t~ADi~ 79 (126)
T cd03183 1 KRARVDEYLAWQHTNLRLGCAKYFWQKVLLPLLGGKPVSPEKVKKAEENLEESLDLLENYFLKD-KPFLAGDEISIADLS 79 (126)
T ss_pred CcccHHHHHHHHHhhhHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCCHHHHH
Confidence 58999999999999998765321111 111 34566667888999999999985432 389999999999999
Q ss_pred hHHHHHHHHhhcCC-CCCCchHHHHHHHhhc--CC
Q psy3262 72 LIPQVFNARRFHVD-LRPFPIVLRIDRELEN--HP 103 (103)
Q Consensus 72 l~~~~~~~~~~~~~-~~~~p~l~~~~~ri~~--~p 103 (103)
+++.+.+....+++ .+.+|+|.+|+++|.+ ||
T Consensus 80 l~~~~~~~~~~~~~~~~~~p~l~~w~~~~~~~~~p 114 (126)
T cd03183 80 AVCEIMQPEAAGYDVFEGRPKLAAWRKRVKEAGNP 114 (126)
T ss_pred HHHHHHHHHhcCCcccccCchHHHHHHHHHHhcch
Confidence 99988888766775 4889999999999999 77
No 14
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.80 E-value=4.3e-19 Score=101.66 Aligned_cols=98 Identities=17% Similarity=0.164 Sum_probs=79.0
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHh-hh----c-ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVL-IY----V-GEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIP 74 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~-~~----~-~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~ 74 (103)
+||++++|+.|.++++++.+..... .. . .+++..+...+.+.+.++.||+.|+++ +|++|+++|+|||++++
T Consensus 2 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~g~~~slaDi~~~~ 79 (105)
T cd03179 2 ERAQVLRWLFFEQYSHEPYIATLRFLRVYLGLGEADAEVLAFLRERGHAALAVLEAHLAGR--DFLVGDALTIADIALAA 79 (105)
T ss_pred cHHHHHHHHHHhhcccCccceeeeeeEeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccC--ccccCCCCCHHHHHHHH
Confidence 5899999999999999886532111 11 1 134566678889999999999999765 89999999999999999
Q ss_pred HHHHHHhhcCCCCCCchHHHHHHHhh
Q psy3262 75 QVFNARRFHVDLRPFPIVLRIDRELE 100 (103)
Q Consensus 75 ~~~~~~~~~~~~~~~p~l~~~~~ri~ 100 (103)
++.++...+.+...+|++.+|+++++
T Consensus 80 ~~~~~~~~~~~~~~~p~l~~~~~~~~ 105 (105)
T cd03179 80 YTHVADEGGFDLADYPAIRAWLARIE 105 (105)
T ss_pred HHHhccccCCChHhCccHHHHHHhhC
Confidence 99988666666678999999999974
No 15
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=99.80 E-value=6.6e-19 Score=103.61 Aligned_cols=101 Identities=22% Similarity=0.260 Sum_probs=80.9
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcC----hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVG----EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQV 76 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~ 76 (103)
+|+++++|+.|+++++++.+...+....+ ++...+...+.+.+.++.||+.|+.+ +|++|+++|+|||++++.+
T Consensus 1 ~ra~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~--~~l~G~~~siaDi~l~~~~ 78 (123)
T cd03181 1 EEAQVLQWVSFANTELLPAVAAWFLPLLGIAPYNKKSVEAALEELDRVLGVLEERLLKR--TYLVGERLTLADIFVAGAL 78 (123)
T ss_pred ChHHHHHHHHHHHhhhHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHHHHHHHHHccC--ceeccCCccHHHHHHHHHH
Confidence 58999999999999999876433322222 23456667888999999999999875 8999999999999999999
Q ss_pred HHHHhhcCC---CCCCchHHHHHHHhhcCC
Q psy3262 77 FNARRFHVD---LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 77 ~~~~~~~~~---~~~~p~l~~~~~ri~~~p 103 (103)
.+......+ ++.+|++.+|.+++.++|
T Consensus 79 ~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 108 (123)
T cd03181 79 LLGFTYVFDKEWRAKYPNVTRWFNTVVNQP 108 (123)
T ss_pred HHHHHHHcCHHHHHhChHHHHHHHHHHcCH
Confidence 887544333 367999999999999886
No 16
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.79 E-value=7.1e-19 Score=103.86 Aligned_cols=98 Identities=20% Similarity=0.184 Sum_probs=78.1
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+|+++++|+.|.++.+++.+. ..+.. .+...+...+.+.+.++.||++|.++ +|++|+++|+|||++++++.++.
T Consensus 3 ~ra~~~~w~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~t~ADi~l~~~~~~~~ 77 (126)
T cd03185 3 ERAVARFWAAFIDDKLFPAGR-KVLAA--KGEEREKAKEEALEALKVLEEELGGK--PFFGGDTIGYVDIALGSFLGWFR 77 (126)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHcc--chHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCcchHHHHHHHHHHHHH
Confidence 589999999999988887653 33321 23444556788899999999999864 99999999999999999988864
Q ss_pred hh----cC---CCCCCchHHHHHHHhhcCC
Q psy3262 81 RF----HV---DLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 81 ~~----~~---~~~~~p~l~~~~~ri~~~p 103 (103)
.. +. +.+.+|++.+|+++|.++|
T Consensus 78 ~~~~~~~~~~~~~~~~p~l~~w~~~~~~~p 107 (126)
T cd03185 78 AYEEVGGVKLLDEEKTPLLAAWAERFLELE 107 (126)
T ss_pred HHHHHcCccccCcccCchHHHHHHHHHhcc
Confidence 21 33 3477999999999999987
No 17
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.79 E-value=2.5e-19 Score=104.72 Aligned_cols=99 Identities=17% Similarity=0.113 Sum_probs=77.8
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhh-c-C--hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIY-V-G--EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQV 76 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~-~-~--~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~ 76 (103)
+|+++++|+.|+++++++......+.. + + .+...+...+.+.+.+..+|.++.+ +++|++| ++|+||+++++.+
T Consensus 3 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~-~~~~l~G-~fSiAD~~l~~~~ 80 (114)
T cd03195 3 QRARARQVQAWLRSDLLPIRVERSTEVVFAGAKAEPLSEAAQAAAEKLIAVAEALLPP-GAANLFG-EWCIADTDLALML 80 (114)
T ss_pred hhHHHHHHHHHHHhhHHHHHHhCCccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCcccC-CccHHHHHHHHHH
Confidence 589999999999999987521111011 1 1 1234456678889999999999963 2389999 5999999999999
Q ss_pred HHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 77 FNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 77 ~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
.|....|++++ |++.+|.+||.+||
T Consensus 81 ~~~~~~g~~l~--p~l~ay~~r~~~rP 105 (114)
T cd03195 81 NRLVLNGDPVP--ERLRDYARRQWQRP 105 (114)
T ss_pred HHHHHcCCCCC--HHHHHHHHHHHCCH
Confidence 99999999875 99999999999998
No 18
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.79 E-value=6.2e-19 Score=104.26 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=76.0
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+||+.|.|+.+++ .+.+.+. ..+.. ++..+...+.+.+.++.+|+.|.+.+++|++|+++|+|||++++++.++.
T Consensus 2 ~ra~~r~~~~~~~-~~~~~~~-~~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~ 76 (124)
T cd03184 2 EKAQQKLLLERFS-KVVSAFY-KLLGA---PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLE 76 (124)
T ss_pred hHHHHHHHHHHHh-hhhHHHH-HHHhc---cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHH
Confidence 5899999999997 4544332 23222 23344567788999999999998633589999999999999999988765
Q ss_pred hhc------CCCCCCchHHHHHHHhhcCC
Q psy3262 81 RFH------VDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 81 ~~~------~~~~~~p~l~~~~~ri~~~p 103 (103)
..+ .+++.+|+|++|+++|.++|
T Consensus 77 ~~~~~~~~~~~~~~~p~l~~w~~r~~~~p 105 (124)
T cd03184 77 ALKLLLGYEFPLDRFPKLKKWMDAMKEDP 105 (124)
T ss_pred HHHhhccccCCcccChHHHHHHHHhccCh
Confidence 432 34688999999999999987
No 19
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.77 E-value=2.7e-18 Score=108.60 Aligned_cols=100 Identities=13% Similarity=0.156 Sum_probs=80.0
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+|+++++|+.+..+++++.+. .++....++.......+.+.+.++.+|++|+++ +|++|+++|+|||++++.+.+..
T Consensus 90 ~ra~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~s~ADi~l~~~~~~~~ 166 (201)
T PRK10542 90 SRYHTIEWLNYIATELHKGFT-PLFRPDTPEEYKPTVRAQLEKKFQYVDEALADE--QWICGQRFTIADAYLFTVLRWAY 166 (201)
T ss_pred HHHHHHHHHHHHHhhhhhhhh-hccCCCChHHHHHHHHHHHHHHHHHHHHHhcCC--CeeeCCCCcHHhHHHHHHHHHhh
Confidence 478889999999888776542 222222233344556778899999999999875 89999999999999999998887
Q ss_pred hhcCCCCCCchHHHHHHHhhcCC
Q psy3262 81 RFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 81 ~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
..+.+++.+|+|.+|++++.++|
T Consensus 167 ~~~~~~~~~p~l~~w~~~~~~~p 189 (201)
T PRK10542 167 AVKLNLEGLEHIAAYMQRVAERP 189 (201)
T ss_pred ccCCCcccchHHHHHHHHHHcCH
Confidence 77777788999999999999987
No 20
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.77 E-value=4.7e-18 Score=102.81 Aligned_cols=98 Identities=21% Similarity=0.299 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh
Q psy3262 2 IGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR 81 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~ 81 (103)
|+++++|++|....+.+.+. .... ...++..+.....+.+.++.||++|.++ +|++|+++|+|||++++++.++..
T Consensus 5 ~a~i~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~l~~LE~~L~~~--~yl~Gd~~TlADi~l~~~l~~~~~ 80 (142)
T cd03190 5 RSEIDELNEWIYDNINNGVY-KAGF-ATTQEAYDEAVDELFEALDRLEELLSDR--RYLLGDRLTEADIRLFTTLIRFDA 80 (142)
T ss_pred HHHHHHHHHHHHHHHhhHHH-HHhh-ccCHHHHHHHHHHHHHHHHHHHHHHccC--CeeeCCCccHHHHHHHHHHHHHHH
Confidence 78999999999988877542 2222 2334556667788999999999999875 899999999999999998876532
Q ss_pred h-------cC-CCCCCchHHHHHHHhhcCC
Q psy3262 82 F-------HV-DLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 82 ~-------~~-~~~~~p~l~~~~~ri~~~p 103 (103)
. +. +++.||+|.+|++||.++|
T Consensus 81 ~~~~~~~~~~~~~~~~P~L~~w~~r~~~~P 110 (142)
T cd03190 81 VYVQHFKCNLKRIRDYPNLWNYLRRLYQNP 110 (142)
T ss_pred HhhhhcccccchhhhCchHHHHHHHHhcCc
Confidence 1 11 2468999999999999987
No 21
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.76 E-value=5.2e-18 Score=108.54 Aligned_cols=101 Identities=20% Similarity=0.170 Sum_probs=77.6
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHH-hhhc---ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTV-LIYV---GEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQV 76 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~ 76 (103)
+|+++++|+.|..+.+++.+.... +... ..+...+...+.+.+.++.||++|.++ +|++|+++|+|||++++++
T Consensus 93 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~Gd~~t~ADi~l~~~~ 170 (215)
T PRK13972 93 ERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENS--PWLGGENYSIADIACWPWV 170 (215)
T ss_pred HHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhccC--ccccCCCCCHHHHHHHHHH
Confidence 478999999999988887652211 1111 122344556677899999999999875 8999999999999998877
Q ss_pred HHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 77 FNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 77 ~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
......+++++.||+|.+|+++|.+||
T Consensus 171 ~~~~~~~~~~~~~P~l~~w~~r~~~rp 197 (215)
T PRK13972 171 NAWTRQRIDLAMYPAVKNWHERIRSRP 197 (215)
T ss_pred HHHhhcCCcchhCHHHHHHHHHHHhCH
Confidence 554445666788999999999999987
No 22
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.76 E-value=1.4e-18 Score=99.53 Aligned_cols=93 Identities=17% Similarity=0.124 Sum_probs=74.5
Q ss_pred HHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcCC
Q psy3262 6 REICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHVD 85 (103)
Q Consensus 6 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~ 85 (103)
++|+.|.++.+++.+.. .+.... +...+...+++.+.++.||++|+++ +|++|+++|+|||++++++.|....+.
T Consensus 2 ~~w~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~l~~le~~l~~~--~~l~g~~~t~aDi~~~~~~~~~~~~~~- 76 (103)
T cd03207 2 LRWLFFYAGVVEPALIA-KAMGIE-EPARMAGFGSYDDVLAALEQALAKG--PYLLGERFTAADVLVGSPLGWGLQFGL- 76 (103)
T ss_pred eeeeeeccccccHHHHH-HHcCCC-cchhhhhhhhHHHHHHHHHHHHccC--CcccCCccCHHHHHHHHHHHHHHHcCC-
Confidence 57888988888887532 222222 2334556678999999999999875 899999999999999999999876654
Q ss_pred CCCCchHHHHHHHhhcCC
Q psy3262 86 LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 86 ~~~~p~l~~~~~ri~~~p 103 (103)
...+|+|++|++++++||
T Consensus 77 ~~~~p~l~~w~~~~~~~p 94 (103)
T cd03207 77 LPERPAFDAYIARITDRP 94 (103)
T ss_pred CCCChHHHHHHHHHHcCH
Confidence 478999999999999987
No 23
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.75 E-value=1e-17 Score=94.44 Aligned_cols=71 Identities=30% Similarity=0.405 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcCCC--CCCchHHHHHHHhhcCC
Q psy3262 31 EKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHVDL--RPFPIVLRIDRELENHP 103 (103)
Q Consensus 31 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~--~~~p~l~~~~~ri~~~p 103 (103)
++..+.....+.+.|+.+|+.|.++ +|++|+++|+|||++++.+.++...+.+. ++||+|++|++||.+||
T Consensus 23 ~~~~~~~~~~~~~~l~~le~~l~~~--~~l~G~~~t~ADi~~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~P 95 (95)
T PF00043_consen 23 EEMVEEARAKVPRYLEVLEKRLKGG--PYLVGDKLTIADIALFPMLDWLERLGPDFLFEKFPKLKKWYERMFARP 95 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTS--SSSSBSS-CHHHHHHHHHHHHHHHHTTTTTHTTSHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC--CeeeccCCchhHHHHHHHHHHHHHhCCCcccccCHHHHHHHHHHHcCC
Confidence 4467777889999999999999964 99999999999999999999998887664 89999999999999998
No 24
>KOG0868|consensus
Probab=99.73 E-value=2.9e-17 Score=101.06 Aligned_cols=103 Identities=57% Similarity=0.998 Sum_probs=92.5
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHH---HHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEK---KREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVF 77 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~ 77 (103)
.||.+|+....+.+.|+|..+..++...+.+. -..++...+.++|..||+.|..+.|.|.+||++|+||+++.+.+.
T Consensus 94 KRA~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~ 173 (217)
T KOG0868|consen 94 KRAKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVY 173 (217)
T ss_pred HHHHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhh
Confidence 38999999999999999998777777765432 278899999999999999999888999999999999999999999
Q ss_pred HHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 78 NARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 78 ~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
.+.++.+|++.||-+.+..+.+.+.|
T Consensus 174 nA~rf~vdl~PYPti~ri~e~l~elp 199 (217)
T KOG0868|consen 174 NANRFHVDLTPYPTITRINEELAELP 199 (217)
T ss_pred hhhhccccCCcCchHHHHHHHHHhCH
Confidence 99999999999999999999987765
No 25
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=5.5e-17 Score=103.48 Aligned_cols=101 Identities=21% Similarity=0.216 Sum_probs=83.9
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhc----C-hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYV----G-EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQ 75 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~ 75 (103)
+|+++.+|+.+..+++++.+........ . .+...+...+.+.+.++.+|+.|+++ +|++|+++|+|||++++.
T Consensus 91 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~tiAD~~~~~~ 168 (211)
T COG0625 91 ARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLADG--PYLAGDRFTIADIALAPL 168 (211)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhccC--CcccCCCCCHHHHHHHHH
Confidence 3678889999999999987643222211 1 24566777889999999999999985 999999999999999999
Q ss_pred HHHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 76 VFNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 76 ~~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
+.++...+.+.+.+|++.+|++|+.+||
T Consensus 169 ~~~~~~~~~~~~~~p~l~~w~~r~~~rp 196 (211)
T COG0625 169 LWRLALLGEELADYPALKAWYERVLARP 196 (211)
T ss_pred HHHhhhcCcccccChHHHHHHHHHHcCC
Confidence 9998887777788999999999999887
No 26
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=99.71 E-value=8.7e-17 Score=94.71 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=74.9
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+++++++.+..+. +++..+...++.. ..+...+...+.+.+.++.||++|+++ +|++|+++|+||+++++.+.++.
T Consensus 2 e~~~id~~~~~~~-d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~T~aDi~l~~~~~~~~ 77 (121)
T cd03209 2 ERIRVDMLEQQAM-DLRMGLARICYSP-DFEKLKPDYLAKLPDKLKLFSDFLGDR--PWFAGDKITYVDFLLYEALDQHR 77 (121)
T ss_pred chHHHHHHHHHHH-HHHHHHHHhhcCc-chHHHHHHHHHHHHHHHHHHHHHhCCC--CCcCCCCccHHHHHHHHHHHHHH
Confidence 4678888888766 4554332111211 223455556788899999999999865 89999999999999999999987
Q ss_pred hhcC-CCCCCchHHHHHHHhhcCC
Q psy3262 81 RFHV-DLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 81 ~~~~-~~~~~p~l~~~~~ri~~~p 103 (103)
..+. .++.||+|.+|++|+.++|
T Consensus 78 ~~~~~~~~~~P~l~~~~~rv~~~p 101 (121)
T cd03209 78 IFEPDCLDAFPNLKDFLERFEALP 101 (121)
T ss_pred HhCccccccChHHHHHHHHHHHCH
Confidence 6533 3578999999999999987
No 27
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=99.71 E-value=9.7e-17 Score=102.48 Aligned_cols=98 Identities=15% Similarity=0.247 Sum_probs=75.2
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+|+++++|+.++.+.++... ... ..+.+...+...+.+.+.++.+|++|.++ +|++|+++|+|||++++.+.+..
T Consensus 95 ~ra~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~l~~~l~~le~~L~~~--~~l~G~~~t~AD~~l~~~~~~~~ 169 (211)
T PRK09481 95 ARGESRLMMHRIEKDWYSLM--NKI-VNGSASEADAARKQLREELLAIAPVFGEK--PYFMSEEFSLVDCYLAPLLWRLP 169 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HHH-hcCCHHHHHHHHHHHHHHHHHHHHHhccC--CcccCCCccHHHHHHHHHHHHHH
Confidence 36888999988776543321 111 11223444556778899999999999864 89999999999999999998877
Q ss_pred hhcCCC--CCCchHHHHHHHhhcCC
Q psy3262 81 RFHVDL--RPFPIVLRIDRELENHP 103 (103)
Q Consensus 81 ~~~~~~--~~~p~l~~~~~ri~~~p 103 (103)
..++++ +.+|+|++|++||.+||
T Consensus 170 ~~~~~~~~~~~p~l~~w~~~~~~rp 194 (211)
T PRK09481 170 VLGIELSGPGAKELKGYMTRVFERD 194 (211)
T ss_pred hcCCCCCCCCChhHHHHHHHHhccH
Confidence 667665 57999999999999987
No 28
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.70 E-value=1.7e-16 Score=92.31 Aligned_cols=73 Identities=14% Similarity=0.052 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCC--------CCeeecCCCchhHHhhHHHHHHHHhhcCCC-----CCCchHHHHHH
Q psy3262 31 EKKREWAQHWIHRGLRAVEKLLSSSA--------GKYCVGDDISVADCCLIPQVFNARRFHVDL-----RPFPIVLRIDR 97 (103)
Q Consensus 31 ~~~~~~~~~~~~~~l~~le~~l~~~~--------~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~-----~~~p~l~~~~~ 97 (103)
....+....++.+.++.||++|.++. ++|++|+++|+|||++++.+.|+...+++. .+||+|.+|++
T Consensus 24 ~~~i~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~P~l~~w~~ 103 (111)
T cd03204 24 VEYLKKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSRRYWGNGKRPNLEAYFE 103 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccccccccccChHHHHHHH
Confidence 34566788999999999999998642 159999999999999999999987666653 57999999999
Q ss_pred HhhcCC
Q psy3262 98 ELENHP 103 (103)
Q Consensus 98 ri~~~p 103 (103)
||.+||
T Consensus 104 rv~aRp 109 (111)
T cd03204 104 RVLQRE 109 (111)
T ss_pred HHHcCC
Confidence 999998
No 29
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=99.70 E-value=1.4e-16 Score=94.50 Aligned_cols=100 Identities=20% Similarity=0.199 Sum_probs=72.8
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcC-CCCeeecCCCchhHHhhHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSS-AGKYCVGDDISVADCCLIPQVFNA 79 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~-~~~~l~G~~~s~ADi~l~~~~~~~ 79 (103)
+++++++.+..++ +++..+...++. ..+...+...+.+.+.++.||+.|+++ +++|++|+++|+|||++++.+.|.
T Consensus 3 e~~~vd~~~~~~~-d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~ 79 (126)
T cd03210 3 EAALIDMVNDGVE-DLRLKYVRMIYQ--NYEAGKDDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIH 79 (126)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHH
Confidence 3567777777654 555433211111 123344556677899999999999863 358999999999999999999888
Q ss_pred Hhhc-CCCCCCchHHHHHHHhhcCC
Q psy3262 80 RRFH-VDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 80 ~~~~-~~~~~~p~l~~~~~ri~~~p 103 (103)
.... ..++.+|+|.+|++||.++|
T Consensus 80 ~~~~~~~~~~~P~l~~~~~rv~~~p 104 (126)
T cd03210 80 LVLAPGCLDAFPLLKAFVERLSARP 104 (126)
T ss_pred HHhChHhhhcChHHHHHHHHHHhCc
Confidence 6542 23588999999999999997
No 30
>PLN02395 glutathione S-transferase
Probab=99.69 E-value=3.1e-16 Score=100.10 Aligned_cols=101 Identities=23% Similarity=0.185 Sum_probs=77.1
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHh----hh---c-ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhh
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVL----IY---V-GEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCL 72 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~----~~---~-~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l 72 (103)
+|+++++|+.+.++.+++.+..... .. . ..+...+...+.+.+.++.+|++|+++ +|++|+++|+|||++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~G~~~s~ADi~l 168 (215)
T PLN02395 91 ERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLSKS--KYLAGDFVSLADLAH 168 (215)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhcCC--ccccCCCcCHHHHHH
Confidence 4789999999999888876432221 11 1 123445556788999999999999875 899999999999999
Q ss_pred HHHHHHHHh-hc--CCCCCCchHHHHHHHhhcCC
Q psy3262 73 IPQVFNARR-FH--VDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 73 ~~~~~~~~~-~~--~~~~~~p~l~~~~~ri~~~p 103 (103)
++++.+... .+ ..+..+|+|.+|++++.+||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~p~L~~w~~~~~~rp 202 (215)
T PLN02395 169 LPFTEYLVGPIGKAYLIKDRKHVSAWWDDISSRP 202 (215)
T ss_pred HHHHHHHhcccchhhhhccCchHHHHHHHHHcCh
Confidence 998877632 22 23578999999999999987
No 31
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=99.67 E-value=4.3e-16 Score=87.89 Aligned_cols=93 Identities=28% Similarity=0.314 Sum_probs=74.0
Q ss_pred HHHHHHHHHcCCCCCchHHHhhh-c---ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 5 VREICEVIASGIQPLQNLTVLIY-V---GEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+++|+.|...++++.+....... . ..+...+...+.+.+.++.||++|+++ +|++|+++|+||+++++++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~g~~~t~aDi~~~~~l~~~~ 78 (100)
T cd00299 1 VRAWEEWADTTLEPAARRLLLLAFVGPEVDEAALEEAREELAAALAALEKLLAGR--PYLAGDRFSLADIALAPVLARLD 78 (100)
T ss_pred ChHHHHHHHhhcCCcccceeeeeccCCCCCHHHHHHHHHHHHHHHHHHHHHHccC--CCCCCCCcCHHHHHHHHHHHHHH
Confidence 37899999999988764332221 1 124566667888999999999999875 89999999999999999999987
Q ss_pred hhcCC---CCCCchHHHHHHHh
Q psy3262 81 RFHVD---LRPFPIVLRIDREL 99 (103)
Q Consensus 81 ~~~~~---~~~~p~l~~~~~ri 99 (103)
..+.. .+.+|++.+|.++|
T Consensus 79 ~~~~~~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 79 LLGPLLGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HhhhhhhhhccCccHHHHHHhC
Confidence 65544 47899999999985
No 32
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.67 E-value=4.7e-16 Score=91.61 Aligned_cols=92 Identities=15% Similarity=0.177 Sum_probs=64.0
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhh-cChHHHHHHHHHHHHHHHHHHHHHhhc-CCCCeeecCCCchhHHhhHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIY-VGEEKKREWAQHWIHRGLRAVEKLLSS-SAGKYCVGDDISVADCCLIPQVFN 78 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~le~~l~~-~~~~~l~G~~~s~ADi~l~~~~~~ 78 (103)
+||++++|+.|.. .+...++.. +.+. ..+.+.+.++.||+.|++ .+++|++| ++|+|||++++++.+
T Consensus 4 ~ra~~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~ 72 (120)
T cd03203 4 KREFADELLAYTD-----AFTKALYSSLIKGD-----PSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIER 72 (120)
T ss_pred HHHHHHHHHHHHH-----HHHHHHHHHHhcCC-----chHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHH
Confidence 4889999999921 111112121 1110 123456778888888873 12489999 999999999999876
Q ss_pred HHh-----hcCCC-CCCchHHHHHHHhhcCC
Q psy3262 79 ARR-----FHVDL-RPFPIVLRIDRELENHP 103 (103)
Q Consensus 79 ~~~-----~~~~~-~~~p~l~~~~~ri~~~p 103 (103)
+.. .++++ +++|+|.+|+++|.+||
T Consensus 73 ~~~~~~~~~~~~~~~~~P~l~~W~~~~~~rp 103 (120)
T cd03203 73 FQIFLSELFNYDITEGRPNLAAWIEEMNKIE 103 (120)
T ss_pred HHHHHHHhcCccccccCcHHHHHHHHHhcch
Confidence 532 45665 68999999999999987
No 33
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.67 E-value=3.7e-16 Score=91.36 Aligned_cols=97 Identities=22% Similarity=0.165 Sum_probs=69.4
Q ss_pred HHHHHHHHHHcCCCCCchHHHhhh----c-C--hHHHHHHHHHHHHHHHHHHHHHhhcC-CCCeeecCCCchhHHhhHHH
Q psy3262 4 KVREICEVIASGIQPLQNLTVLIY----V-G--EEKKREWAQHWIHRGLRAVEKLLSSS-AGKYCVGDDISVADCCLIPQ 75 (103)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~~~~~~----~-~--~~~~~~~~~~~~~~~l~~le~~l~~~-~~~~l~G~~~s~ADi~l~~~ 75 (103)
.+|.|..+.++++++.+...+... . + .+...+...+.+.+.++.+|..+.+. +++|++|+ +|+|||+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~ 80 (114)
T cd03194 2 AARAWARSAAAEMHSGFAALRSECPMNLRARVPGFELSEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPV 80 (114)
T ss_pred chhHHHHHHHHHHHCcHHHHHHhCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHH
Confidence 356677788888887763222111 1 1 12344555666777777777777532 35899999 99999999999
Q ss_pred HHHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 76 VFNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 76 ~~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
+.|....+.+.. |+|++|++||.+||
T Consensus 81 ~~~~~~~~~~~~--P~l~~~~~rv~~rP 106 (114)
T cd03194 81 VTRFRTYGLPLS--PAAQAYVDALLAHP 106 (114)
T ss_pred HHHHHHcCCCCC--HHHHHHHHHHHCCH
Confidence 999876676643 99999999999987
No 34
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=99.65 E-value=6.6e-16 Score=92.93 Aligned_cols=69 Identities=23% Similarity=0.360 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcC-CCCCCchHHHHHHHhhcCC
Q psy3262 35 EWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHV-DLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 35 ~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~-~~~~~p~l~~~~~ri~~~p 103 (103)
....+.+.+.++.||++|.+++++|++|+++|+|||++++.+.++..... .++.||+|++|++||.++|
T Consensus 38 ~~~~~~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~~~l~~~P~l~~~~~rv~~~P 107 (137)
T cd03208 38 LIKEKAKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDPSLLSDFPLLQAFKTRISNLP 107 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhchhhhccChHHHHHHHHHHcCH
Confidence 44455678999999999984335899999999999999999998865433 3588999999999999987
No 35
>PLN02473 glutathione S-transferase
Probab=99.65 E-value=1.6e-15 Score=96.86 Aligned_cols=101 Identities=18% Similarity=0.138 Sum_probs=75.2
Q ss_pred ChhHHHHHHHHHHcCCCCCchH----HHhhh-cC---hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhh
Q psy3262 1 MIGKVREICEVIASGIQPLQNL----TVLIY-VG---EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCL 72 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~----~~~~~-~~---~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l 72 (103)
+|+++++|+.++.+.+.+.... ..+.. .+ ++...+.....+.+.++.||++|+++ +|++|+++|+|||++
T Consensus 92 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~l~Gd~~t~ADi~~ 169 (214)
T PLN02473 92 HRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLATN--RYLGGDEFTLADLTH 169 (214)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhccC--CcccCCCCCHHHHHH
Confidence 4789999999998777653211 11111 11 12344556678899999999999875 899999999999999
Q ss_pred HHHHHHHHhh-cC-C-CCCCchHHHHHHHhhcCC
Q psy3262 73 IPQVFNARRF-HV-D-LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 73 ~~~~~~~~~~-~~-~-~~~~p~l~~~~~ri~~~p 103 (103)
++.+.+.... .. + ++++|+|.+|++||.+||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~P~l~~w~~~~~~~p 203 (214)
T PLN02473 170 MPGMRYIMNETSLSGLVTSRENLNRWWNEISARP 203 (214)
T ss_pred HHHHHHHHhccccHHHHhcCHHHHHHHHHHhcCh
Confidence 9998876432 22 1 478999999999999987
No 36
>PRK15113 glutathione S-transferase; Provisional
Probab=99.65 E-value=8.3e-16 Score=98.37 Aligned_cols=99 Identities=14% Similarity=0.085 Sum_probs=74.0
Q ss_pred ChhHHHHHHHHHHcCCCCCchHH----HhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLT----VLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQV 76 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~ 76 (103)
+|+++++|+.|+.+++++..... ++.....+...+...+.+.+.++.+|++|++. ++|++|+ +|+|||++++.+
T Consensus 98 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~-~~~l~G~-~TlADi~l~~~l 175 (214)
T PRK15113 98 ARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPG-QPNLFGE-WCIADTDLALML 175 (214)
T ss_pred HHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcC-CCEeeCC-ccHHHHHHHHHH
Confidence 47899999999988876532111 11111122334556677899999999999853 3799996 999999999999
Q ss_pred HHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 77 FNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 77 ~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
.++...+.++. |+|.+|++||.+||
T Consensus 176 ~~~~~~~~~~~--p~l~~~~~r~~~rp 200 (214)
T PRK15113 176 NRLVLHGDEVP--ERLADYATFQWQRA 200 (214)
T ss_pred HHHHHcCCCCC--HHHHHHHHHHhcCH
Confidence 88876666543 99999999999987
No 37
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=99.64 E-value=1.1e-15 Score=87.51 Aligned_cols=98 Identities=21% Similarity=0.323 Sum_probs=74.7
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcC---hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVG---EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVF 77 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~ 77 (103)
+++++++|++.. .++...+...++...+ .+.......+.+.+.++.||++|.+.+++|++|+++|+|||++++++.
T Consensus 2 e~~~v~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~ 80 (104)
T cd03192 2 EAARVDALVDTI-ADLRAEFAKYFYEKDGEEKKEKKKEFLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLD 80 (104)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHhhcCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHH
Confidence 578899999985 4666544322322111 245666778889999999999998722389999999999999999999
Q ss_pred HHHhhcC-C-CCCCchHHHHHHHh
Q psy3262 78 NARRFHV-D-LRPFPIVLRIDREL 99 (103)
Q Consensus 78 ~~~~~~~-~-~~~~p~l~~~~~ri 99 (103)
+....+. + .+.+|++.+|++++
T Consensus 81 ~~~~~~~~~~~~~~p~l~~~~~~~ 104 (104)
T cd03192 81 YLLYLDPKLLLKKYPKLKALRERV 104 (104)
T ss_pred HHHhhCchhhHHhChhHHHHHHhC
Confidence 9876654 3 67899999999985
No 38
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.64 E-value=6.1e-16 Score=88.16 Aligned_cols=93 Identities=17% Similarity=0.272 Sum_probs=64.8
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHh-hhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVL-IYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNA 79 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~ 79 (103)
.++.+++|+.|.. .. .... .....+...+...+.+.+.++.+|++|++++|+|++|+++|+||+++++.+...
T Consensus 5 ~~a~i~~W~~f~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~ 78 (99)
T PF14497_consen 5 WRALIDRWLDFSV-----AF-RRRKARLEKDEASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASL 78 (99)
T ss_dssp THHHHHHHHH-GH-----CC-HCCHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc-----hh-hhHHHHHHHhhhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHH
Confidence 3677888998651 11 0000 001123456667889999999999999998555999999999999999988555
Q ss_pred HhhcCCC-CCCchHHHHHHHhhc
Q psy3262 80 RRFHVDL-RPFPIVLRIDRELEN 101 (103)
Q Consensus 80 ~~~~~~~-~~~p~l~~~~~ri~~ 101 (103)
... +. +.+|+|.+|++||++
T Consensus 79 ~~~--~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 79 RWA--DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp HCC--HHTTTCHHHHHHHHHHHT
T ss_pred hhc--ccccccHHHHHHHHhhcC
Confidence 522 22 589999999999974
No 39
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.62 E-value=2.7e-15 Score=89.77 Aligned_cols=73 Identities=19% Similarity=0.347 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc--------------CCCCeeecCCCchhHHhhHHHHHHHHh-----hcCCC-CCCc
Q psy3262 31 EKKREWAQHWIHRGLRAVEKLLSS--------------SAGKYCVGDDISVADCCLIPQVFNARR-----FHVDL-RPFP 90 (103)
Q Consensus 31 ~~~~~~~~~~~~~~l~~le~~l~~--------------~~~~~l~G~~~s~ADi~l~~~~~~~~~-----~~~~~-~~~p 90 (103)
++..+...+.+.+.|+.||++|++ .+++|++|+++|+|||++++.+.++.. .++++ +.+|
T Consensus 24 ~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~~i~~~~P 103 (134)
T cd03198 24 PALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFEIPADLT 103 (134)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCccccCH
Confidence 345566678889999999999986 224799999999999999999887643 25664 7899
Q ss_pred hHHHHHHHhhcCC
Q psy3262 91 IVLRIDRELENHP 103 (103)
Q Consensus 91 ~l~~~~~ri~~~p 103 (103)
+|.+|++||.+||
T Consensus 104 ~L~aw~~ri~aRP 116 (134)
T cd03198 104 GLWRYLKNAYQRE 116 (134)
T ss_pred HHHHHHHHHHCCH
Confidence 9999999999987
No 40
>PRK11752 putative S-transferase; Provisional
Probab=99.62 E-value=3.7e-15 Score=98.26 Aligned_cols=100 Identities=18% Similarity=0.143 Sum_probs=72.1
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHH---hhhcC--hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTV---LIYVG--EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQ 75 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~ 75 (103)
+|+++++|+.|..+.+.. ....+ +...+ .+...+...+++.+.|+.||++|.++ +|++|+++|+|||+++++
T Consensus 139 era~v~~wl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~~~--~fl~Gd~~TlADi~l~~~ 215 (264)
T PRK11752 139 ARTETLNWLFWQQGSAPF-LGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLAEH--EYIAGDEYTIADIAIWPW 215 (264)
T ss_pred HHHHHHHHHHHHhhhhhH-HHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhccC--CCCCCCccCHHHHHHHHH
Confidence 478999999998765421 11111 11111 12334455677889999999999875 899999999999999988
Q ss_pred HHHHHhh-------cCCCCCCchHHHHHHHhhcCC
Q psy3262 76 VFNARRF-------HVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 76 ~~~~~~~-------~~~~~~~p~l~~~~~ri~~~p 103 (103)
+.++... ..+++.||+|.+|+++|.+||
T Consensus 216 l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~rP 250 (264)
T PRK11752 216 YGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAERP 250 (264)
T ss_pred HHHHhhccccccccccCcccCHHHHHHHHHHHhCH
Confidence 7665321 124578999999999999987
No 41
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.62 E-value=3.3e-15 Score=79.81 Aligned_cols=65 Identities=26% Similarity=0.342 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcCC---CCCCchHHHHHHH
Q psy3262 32 KKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHVD---LRPFPIVLRIDRE 98 (103)
Q Consensus 32 ~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~---~~~~p~l~~~~~r 98 (103)
...+...+.+.+.++.||++|+++ +|++|+++|+|||++++++.++...+.+ .+.+|+|.+|++|
T Consensus 2 ~~~~~~~~~~~~~l~~le~~L~~~--~fl~G~~~s~aD~~l~~~l~~~~~~~~~~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 2 AAVERARAQLEAALDALEDHLADG--PFLFGDRPSLADIALAPFLWRLRFVGPDFDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTS--SBTTBSS--HHHHHHHHHHHHHHHCTHTCCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhC--CCCCCCCCCHHHHHHHHHHHHHHHhCcCcCccccCHHHHHHHhC
Confidence 345667888999999999999987 7999999999999999999998776543 3889999999987
No 42
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.61 E-value=4.2e-15 Score=94.63 Aligned_cols=69 Identities=19% Similarity=0.328 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh-hcCCCCCCchHHHHHHHhhcCC
Q psy3262 35 EWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR-FHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 35 ~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~-~~~~~~~~p~l~~~~~ri~~~p 103 (103)
+...+.+.+.+..||+.|.+++|+|++|+++|+||+++++.+.+... .+.+++.||+|++|.+|+.+||
T Consensus 122 ~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~~~~~l~~~P~l~~~~~r~~~~P 191 (205)
T PTZ00057 122 TFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETKYPNSLKNFPLLKAHNEFISNLP 191 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHhChhhhccChhHHHHHHHHHhCh
Confidence 44567889999999999987545899999999999999999888653 4666789999999999999997
No 43
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.60 E-value=4.6e-15 Score=84.34 Aligned_cols=60 Identities=23% Similarity=0.184 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcCCCCCCchHHHHHHHhhcC
Q psy3262 38 QHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHVDLRPFPIVLRIDRELENH 102 (103)
Q Consensus 38 ~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~p~l~~~~~ri~~~ 102 (103)
.+++.+.++.+|++|.++ +|++|+++|+|||++++.+.+. +.+.+.+|+|.+|++||.+.
T Consensus 37 ~~~~~~~l~~le~~L~~~--~fl~Gd~~tiADi~l~~~l~~~---~~~~~~~p~l~~w~~r~~~~ 96 (96)
T cd03200 37 SKEKAAVLRALNSALGRS--PWLVGSEFTVADIVSWCALLQT---GLASAAPANVQRWLKSCENL 96 (96)
T ss_pred HHHHHHHHHHHHHHHcCC--CccCCCCCCHHHHHHHHHHHHc---ccccccChHHHHHHHHHHhC
Confidence 345667888999999876 8999999999999999887653 44457899999999999863
No 44
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.58 E-value=1.9e-14 Score=84.90 Aligned_cols=68 Identities=19% Similarity=0.275 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh-----cCC-CCCCchHHHHHHHhhcCC
Q psy3262 35 EWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF-----HVD-LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 35 ~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~-----~~~-~~~~p~l~~~~~ri~~~p 103 (103)
+...+.+.+.++.||..|++. ++|++|+++|+|||++++++.++... +++ .+.+|+|.+|.+||.+||
T Consensus 29 ~~~~~~l~~~l~~Le~~L~~~-~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~P~l~~w~~rl~~rp 102 (121)
T cd03201 29 DGTEQALLDELEALEDHLKEN-GPFINGEKISAVDLSLAPKLYHLEIALGHYKNWSVPESLTSVKSYMKALFSRE 102 (121)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHCCc
Confidence 445577888999999999852 48999999999999999977665321 343 378999999999999997
No 45
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.57 E-value=2.1e-14 Score=90.93 Aligned_cols=98 Identities=16% Similarity=0.096 Sum_probs=71.6
Q ss_pred hhHHHHHHHHHHcCCCCCchHHHhhh-c-C---hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHH
Q psy3262 2 IGKVREICEVIASGIQPLQNLTVLIY-V-G---EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQV 76 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~~~~~~~~~~~-~-~---~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~ 76 (103)
++++++|+.|..+.+..... .+... . + .+...+...+.+.+.++.||++|.+. + ++|+++|+|||++++.+
T Consensus 87 ~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~~~--~-l~Gd~~t~ADi~l~~~l 162 (202)
T PRK10357 87 ALRVRQLEALADGIMDAALV-SVREQARPAAQQSEDELLRQREKINRSLDALEGYLVDG--T-LKTDTVNLATIAIACAV 162 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhccC--c-ccCCCcCHHHHHHHHHH
Confidence 67888998887765543321 11111 1 1 12344456778999999999999864 7 99999999999999999
Q ss_pred HHHHhhcC--C-CCCCchHHHHHHHhhcCC
Q psy3262 77 FNARRFHV--D-LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 77 ~~~~~~~~--~-~~~~p~l~~~~~ri~~~p 103 (103)
.++..... . ..++|++.+|++||.+||
T Consensus 163 ~~~~~~~~~~~~~~~~p~l~~~~~~i~~rp 192 (202)
T PRK10357 163 GYLNFRRVAPGWCVDRPHLVKLVENLFQRE 192 (202)
T ss_pred HHHHhcccCcchhhcChHHHHHHHHHhcCh
Confidence 88754332 2 367999999999999997
No 46
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.54 E-value=4.7e-14 Score=83.52 Aligned_cols=67 Identities=18% Similarity=0.041 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh-cCC-CCCCchHHHHHHHhhcC
Q psy3262 34 REWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF-HVD-LRPFPIVLRIDRELENH 102 (103)
Q Consensus 34 ~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~~~-~~~~p~l~~~~~ri~~~ 102 (103)
.+...+.+.+.++.+|++|+++ +|++|+++|+||+++++++.|.... +.+ ++.+|+|.+|++||.+.
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~--~fl~Gd~~t~AD~~l~~~l~~~~~~~~~~~~~~~p~l~~W~~r~~~~ 124 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQ--PFLGGAAPNYADYIVFGGFQWARIVSPFPLLEEDDPVYDWFERCLDL 124 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCC--CccCCCCCchhHHHHHHHHHHHHHcCcccccccCChHHHHHHHHhcC
Confidence 3455677889999999999875 8999999999999999999998764 566 47899999999999863
No 47
>PRK10387 glutaredoxin 2; Provisional
Probab=99.54 E-value=2.1e-14 Score=91.35 Aligned_cols=63 Identities=21% Similarity=0.231 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh-cCCCCCCchHHHHHHHhhcCC
Q psy3262 36 WAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF-HVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 36 ~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~~~~~~~p~l~~~~~ri~~~p 103 (103)
...+.+.+.|+.+|++|++ +|++|+++|+|||++++++.|+... +++ .+|+|.+|++||.+||
T Consensus 142 ~~~~~~~~~l~~le~~L~~---~~l~G~~~s~ADi~l~~~l~~~~~~~~~~--~~p~l~~w~~r~~~r~ 205 (210)
T PRK10387 142 GLIKEINADLRALDPLIVK---PNAVNGELSTDDIHLFPILRNLTLVKGIE--WPPRVADYRDNMSKKT 205 (210)
T ss_pred HHHHHHHHHHHHHHHHhcC---ccccCCCCCHHHHHHHHHHhcceeecCCC--CCHHHHHHHHHHHHHh
Confidence 4567889999999999963 8999999999999999999998664 433 4699999999999886
No 48
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.53 E-value=7.2e-14 Score=77.93 Aligned_cols=66 Identities=15% Similarity=0.240 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcC-------CCCCCchHHHHHHHhh
Q psy3262 33 KREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHV-------DLRPFPIVLRIDRELE 100 (103)
Q Consensus 33 ~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~-------~~~~~p~l~~~~~ri~ 100 (103)
......+.+.+.++.+|++|+++ +|++|+++|+|||++++++.++...+. +++.+|+|++|++|+.
T Consensus 16 ~~~~~~~~~~~~l~~le~~L~~~--~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 16 LTREIYSLAKKDLKALSDLLGDK--KFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC--CccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 34456788999999999999976 899999999999999999988764322 2367999999999974
No 49
>KOG0867|consensus
Probab=99.51 E-value=7.9e-14 Score=90.17 Aligned_cols=101 Identities=20% Similarity=0.297 Sum_probs=79.9
Q ss_pred ChhHHHHHHHHHHcCCCCCch-HHHhhh--cC---hHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHH
Q psy3262 1 MIGKVREICEVIASGIQPLQN-LTVLIY--VG---EEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIP 74 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~-~~~~~~--~~---~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~ 74 (103)
+||.+++|+.|.++.+.+... ...+.+ .+ ...........+.+.++.+|..|.++ .|++|+++|+||+.+.+
T Consensus 92 ~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~--~yl~g~~~tlADl~~~~ 169 (226)
T KOG0867|consen 92 ERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLKTQ--VYLAGDQLTLADLSLAS 169 (226)
T ss_pred HHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHccC--CcccCCcccHHHHHHhh
Confidence 489999999999998888631 112211 11 34566667889999999999999986 89999999999999999
Q ss_pred HHHHHH--hh-cCCCCCCchHHHHHHHhhcCC
Q psy3262 75 QVFNAR--RF-HVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 75 ~~~~~~--~~-~~~~~~~p~l~~~~~ri~~~p 103 (103)
.+..+. .. ..+..++|++.+|++++.++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~p~v~~W~~~~~~~P 201 (226)
T KOG0867|consen 170 TLSQFQGKFATEKDFEKYPKVARWYERIQKRP 201 (226)
T ss_pred HHHHHhHhhhhhhhhhhChHHHHHHHHHHhCc
Confidence 888873 33 334688999999999999876
No 50
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.45 E-value=4.5e-13 Score=76.14 Aligned_cols=89 Identities=13% Similarity=0.056 Sum_probs=64.7
Q ss_pred HHHHHHHHcCCCCCchHHHhhhc-----ChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 6 REICEVIASGIQPLQNLTVLIYV-----GEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 6 ~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
++|+.+.++-+...+........ ..+...+...+.+.+.++.+|++|+++ +| +++|+|||++++.+.|..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~--~~---d~~TlADi~l~~~l~~~~ 76 (98)
T cd03205 2 LRLEALADGILDAAVAIVYERRLRPEEKRSQPWLERQRGKIERALDALEAELAKL--PL---DPLDLADIAVACALGYLD 76 (98)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCcHhhhChHHHHHHHHHHHHHHHHHHHhhhhC--CC---CCCCHHHHHHHHHHHHHH
Confidence 56666666544443322222121 134567778899999999999999875 78 899999999999999886
Q ss_pred hh--cCC-CCCCchHHHHHHHh
Q psy3262 81 RF--HVD-LRPFPIVLRIDREL 99 (103)
Q Consensus 81 ~~--~~~-~~~~p~l~~~~~ri 99 (103)
.. +.+ .+++|+|.+|++||
T Consensus 77 ~~~~~~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 77 FRHPDLDWRAAHPALAAWYARF 98 (98)
T ss_pred hHccCcchhhhChHHHHHHHhC
Confidence 43 444 47899999999986
No 51
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=99.44 E-value=8.8e-13 Score=85.75 Aligned_cols=70 Identities=23% Similarity=0.369 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhc----------------CCCCeeecCCCchhHHhhHHHHHHHHh-----hcCC-CCCCch
Q psy3262 34 REWAQHWIHRGLRAVEKLLSS----------------SAGKYCVGDDISVADCCLIPQVFNARR-----FHVD-LRPFPI 91 (103)
Q Consensus 34 ~~~~~~~~~~~l~~le~~l~~----------------~~~~~l~G~~~s~ADi~l~~~~~~~~~-----~~~~-~~~~p~ 91 (103)
.+...+.+.+.++.||+.|.+ .+++|++|+++|+|||++++++.++.. .+++ .+.+|+
T Consensus 121 ~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~~~i~~~~p~ 200 (236)
T TIGR00862 121 NDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNFDIPAEFTG 200 (236)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhCcCccccCch
Confidence 344556688999999999973 124899999999999999999988863 2777 589999
Q ss_pred HHHHHHHhhcCC
Q psy3262 92 VLRIDRELENHP 103 (103)
Q Consensus 92 l~~~~~ri~~~p 103 (103)
|.+|++++.+||
T Consensus 201 l~~w~~~~~~~~ 212 (236)
T TIGR00862 201 VWRYLSNAYARE 212 (236)
T ss_pred HHHHHHHHhccc
Confidence 999999999886
No 52
>PLN02378 glutathione S-transferase DHAR1
Probab=99.42 E-value=9.6e-13 Score=84.29 Aligned_cols=67 Identities=25% Similarity=0.407 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh----h-cCC-CCCCchHHHHHHHhhcCC
Q psy3262 37 AQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR----F-HVD-LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 37 ~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~----~-~~~-~~~~p~l~~~~~ri~~~p 103 (103)
..+.+.+.++.+|++|.+.+|+|++|+++|+|||++++++.++.. + +++ .+.+|+|++|+++|.+||
T Consensus 119 ~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l~~w~~~~~~rp 191 (213)
T PLN02378 119 SEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHVHNYMKTLFSLD 191 (213)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHHHHHHHHHhcCC
Confidence 345677889999999985445899999999999999999876532 1 233 377999999999999987
No 53
>KOG0406|consensus
Probab=99.39 E-value=2.9e-12 Score=82.47 Aligned_cols=100 Identities=16% Similarity=0.187 Sum_probs=73.9
Q ss_pred ChhHHHHHHHHHHcCCCCCchHHHhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLTVLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+||+.+.|+.+++..++.+. ..+.... ..+.++.+.+++...|..+|+.|.+. .+|+.|++++++||++++++..+.
T Consensus 96 ~Ra~arfwa~~id~~~~~~~-~~~~~~~-~~e~~~~~~~e~~e~l~~lE~el~k~-k~~fgG~~~G~vDi~~~p~~~~~~ 172 (231)
T KOG0406|consen 96 ERAQARFWAEYIDKKVFFVG-RFVVAAK-GGEEQEAAKEELREALKVLEEELGKG-KDFFGGETIGFVDIAIGPSFERWL 172 (231)
T ss_pred HHHHHHHHHHHHHhHHHHHH-HHHHhhc-CchHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCcCHhhhhHHhhHHHHH
Confidence 48999999999997665543 2222221 22455566788999999999999932 389999999999999997665442
Q ss_pred ----hhc-CC---CCCCchHHHHHHHhhcCC
Q psy3262 81 ----RFH-VD---LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 81 ----~~~-~~---~~~~p~l~~~~~ri~~~p 103 (103)
..+ ++ .+.+|+|.+|.+||.++|
T Consensus 173 ~~~~~~~~~~~~~~~~~P~L~~W~~~~~~~~ 203 (231)
T KOG0406|consen 173 AVLEKFGGVKFIIEEETPKLIKWIKRMKEDE 203 (231)
T ss_pred HHHHHhcCcccCCCCCCccHHHHHHHHhcCh
Confidence 222 22 378999999999999875
No 54
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.39 E-value=7.7e-13 Score=84.53 Aligned_cols=63 Identities=16% Similarity=0.161 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcCCCCCCc-hHHHHHHHhhcCC
Q psy3262 36 WAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHVDLRPFP-IVLRIDRELENHP 103 (103)
Q Consensus 36 ~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~~~~~p-~l~~~~~ri~~~p 103 (103)
...+.+.+.|+.+|++|+++ +|++ +++|+|||++++++.|+...+. ..+| +|.+|++||.+|+
T Consensus 141 ~~~~~~~~~l~~le~~L~~~--~~l~-g~~TiADi~l~~~l~~~~~~~~--~~~p~~l~~w~~Ri~ar~ 204 (209)
T TIGR02182 141 GLLEEINADLEELDKLIDGP--NAVN-GELSEDDILVFPLLRNLTLVAG--INWPSRVADYLDNMSKKS 204 (209)
T ss_pred HHHHHHHHHHHHHHHHHhCc--cccC-CCCCHHHHHHHHHhcCeeeecC--CCCChHHHHHHHHHHHHh
Confidence 45577899999999999976 8985 5699999999999998865431 1256 9999999999875
No 55
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=99.36 E-value=3.9e-12 Score=84.05 Aligned_cols=64 Identities=17% Similarity=0.314 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh-----hcCCC-CCCchHHHHHHHhhcCC
Q psy3262 39 HWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR-----FHVDL-RPFPIVLRIDRELENHP 103 (103)
Q Consensus 39 ~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~-----~~~~~-~~~p~l~~~~~ri~~~p 103 (103)
+.+...++.||++|+++ |+|++|+++|+|||++++.+.++.. .++++ +.+|+|++|+++|.++|
T Consensus 174 ~~l~~~l~~LE~~L~~~-g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~~w~~ri~~rp 243 (265)
T PLN02817 174 QALLDELTSFDDYIKEN-GPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVKSYMKNIFSME 243 (265)
T ss_pred HHHHHHHHHHHHHHhcC-CCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHhcch
Confidence 56677899999999863 5899999999999999999876632 13443 78999999999999987
No 56
>PLN02907 glutamate-tRNA ligase
Probab=99.32 E-value=9e-12 Score=91.52 Aligned_cols=62 Identities=13% Similarity=0.183 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH--hhcC-CCCCCchHHHHHHHhhcCC
Q psy3262 40 WIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR--RFHV-DLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 40 ~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~--~~~~-~~~~~p~l~~~~~ri~~~p 103 (103)
.+...++.||++|+.+ +|++|+++|+|||++++.+.... .... ..+.||+|.+|+++|.++|
T Consensus 94 ~l~~~L~~LE~~L~~r--tYLvGd~lTLADIaL~~~L~~~~~~~~~~~~~~~yPnL~RW~erI~arP 158 (722)
T PLN02907 94 EFENACEYVDGYLASR--TFLVGYSLTIADIAIWSGLAGSGQRWESLRKSKKYQNLVRWFNSISAEY 158 (722)
T ss_pred HHHHHHHHHHHHhccC--CeecCCCCCHHHHHHHHHHHhhhhhhhcccccccCHHHHHHHHHHHhCC
Confidence 3567789999999876 89999999999999998875541 1222 2478999999999999987
No 57
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=99.31 E-value=8.7e-12 Score=75.59 Aligned_cols=62 Identities=11% Similarity=0.162 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh-cC-CCCCCchHHHHHHHhhc
Q psy3262 39 HWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF-HV-DLRPFPIVLRIDRELEN 101 (103)
Q Consensus 39 ~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~~-~~~~~p~l~~~~~ri~~ 101 (103)
+.+...++.+-+.+.++ ++|++|+++|||||++++.+..+... ++ |+.++|+|.+|++||.+
T Consensus 82 ~~L~~a~~~w~~~~~~~-~~FlaGd~ptIADisvyg~l~s~e~~~~~~Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 82 EWLYDALNTWVAALGKD-RQFHGGSKPNLADLAVYGVLRSVEGHPAFKDMVEETKIGEWYERMDA 145 (149)
T ss_pred HHHHHHHHHHHHHhcCC-CCccCCCCCCHHHHHHHHHHHHHHHhccccchhhCcCHHHHHHHHHH
Confidence 34444444433444443 47999999999999999999888776 77 88899999999999975
No 58
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.28 E-value=1.9e-11 Score=73.56 Aligned_cols=67 Identities=13% Similarity=0.126 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcC-------CCCCCchHHHHHHHhhc
Q psy3262 33 KREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHV-------DLRPFPIVLRIDRELEN 101 (103)
Q Consensus 33 ~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~-------~~~~~p~l~~~~~ri~~ 101 (103)
..+...+...+.++.||+.|+++ +|++|+++|.+|+++++++..+....+ .+.++|+|.+|++||.+
T Consensus 61 ~~~~~~~~a~~~l~~l~~~L~~~--~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~ 134 (137)
T cd03212 61 VEAEIYRDAKECLNLLSQRLGES--QFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILS 134 (137)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCC--CcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHH
Confidence 34555677788999999999986 999999999999999998876654332 24789999999999985
No 59
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.26 E-value=1.3e-11 Score=73.27 Aligned_cols=65 Identities=15% Similarity=0.270 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh-----cCC--CCCCchHHHHHHHhh
Q psy3262 34 REWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF-----HVD--LRPFPIVLRIDRELE 100 (103)
Q Consensus 34 ~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~-----~~~--~~~~p~l~~~~~ri~ 100 (103)
.+...+...+.++.|++.|+++ +|++|+++|.||+++++++.++... ... +..+|||.+|++||.
T Consensus 55 ~ee~~~~~~~~l~aLs~~Lg~~--~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 55 LDQVIEEVDQCCQALSQRLGTQ--PYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 4455677788999999999986 9999999999999999998776533 111 478999999999983
No 60
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=99.15 E-value=1.7e-10 Score=66.67 Aligned_cols=99 Identities=17% Similarity=0.146 Sum_probs=62.1
Q ss_pred ChhHHHHHHHHHHcCCCCCchHH----HhhhcChHHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHH
Q psy3262 1 MIGKVREICEVIASGIQPLQNLT----VLIYVGEEKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQV 76 (103)
Q Consensus 1 ~ra~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~ 76 (103)
+||+.|+...|+.+++.++-+-+ ++.........+.+...+++.+...++.+.. +++|+.|+ +||||..+++++
T Consensus 4 ~RArAR~vqAwlrSdf~~lR~Erpt~vvf~~~~~~pLs~~a~~~a~kL~~~a~~ll~~-g~~~LFGe-wsIAD~dlA~ml 81 (117)
T PF14834_consen 4 ERARARQVQAWLRSDFMALRQERPTNVVFRGARKPPLSEAAQAAAQKLIAVAERLLAD-GGPNLFGE-WSIADADLALML 81 (117)
T ss_dssp HHHHHHHHHHHHHHS-HHHHHHS-THHHHS--------HHHHHHHHHHHHHHHHHTTT---SSTTSS---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHhhCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHhcc-CCCCcccc-chHHHHHHHHHH
Confidence 48999999999999997642110 1111111234555667778888888888886 47899997 999999999999
Q ss_pred HHHHhhcCCCCCCchHHHHHHHhhcCC
Q psy3262 77 FNARRFHVDLRPFPIVLRIDRELENHP 103 (103)
Q Consensus 77 ~~~~~~~~~~~~~p~l~~~~~ri~~~p 103 (103)
.++...|.++. +++..|.++.-+||
T Consensus 82 ~Rl~~~gd~vP--~~l~~Ya~~qwqrp 106 (117)
T PF14834_consen 82 NRLVTYGDPVP--ERLADYAERQWQRP 106 (117)
T ss_dssp HHHHTTT------HHHHHHHHHHHT-H
T ss_pred HHHHHcCCCCC--HHHHHHHHHHHCCH
Confidence 99988886543 35666666665554
No 61
>KOG4420|consensus
Probab=99.10 E-value=4.2e-10 Score=73.35 Aligned_cols=70 Identities=14% Similarity=0.073 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC--CCeeecCCCchhHHhhHHHHHHHHhhcCC---C--CCCchHHHHHHHhhcCC
Q psy3262 34 REWAQHWIHRGLRAVEKLLSSSA--GKYCVGDDISVADCCLIPQVFNARRFHVD---L--RPFPIVLRIDRELENHP 103 (103)
Q Consensus 34 ~~~~~~~~~~~l~~le~~l~~~~--~~~l~G~~~s~ADi~l~~~~~~~~~~~~~---~--~~~p~l~~~~~ri~~~p 103 (103)
.++....+...|+.+|+.|.++. .+|++|+.||+||+++.+.+.++...|+. + ...|||.+|++|+..||
T Consensus 203 lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw~~gsrpnle~Yf~rvrrR~ 279 (325)
T KOG4420|consen 203 LKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYWEDGSRPNLESYFERVRRRF 279 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhcccCCCccHHHHHHHHHhhh
Confidence 34456677888899999998721 37999999999999999999999877753 2 47799999999999875
No 62
>KOG1695|consensus
Probab=98.94 E-value=4.3e-09 Score=67.17 Aligned_cols=68 Identities=18% Similarity=0.284 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh-hcCC-CCCCchHHHHHHHhhcCC
Q psy3262 36 WAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR-FHVD-LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 36 ~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~-~~~~-~~~~p~l~~~~~ri~~~p 103 (103)
.......+.+..+++.|..++.+|++||++|+||++++..+..+.. ...+ .+.+|+|+++.+|+.++|
T Consensus 123 ~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~~~~~~~~~~P~L~a~~~kv~~~p 192 (206)
T KOG1695|consen 123 LYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEELLDPSALDHFPKLKAFKERVSSIP 192 (206)
T ss_pred hhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHhcCchhhccChHHHHHHHHHhcCc
Confidence 4456778889999999996656799999999999999999888876 3443 467899999999999987
No 63
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.82 E-value=1.1e-08 Score=67.31 Aligned_cols=71 Identities=25% Similarity=0.419 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh-----hcCC---CCCCchHHHHHHHhhcC
Q psy3262 31 EKKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR-----FHVD---LRPFPIVLRIDRELENH 102 (103)
Q Consensus 31 ~~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~-----~~~~---~~~~p~l~~~~~ri~~~ 102 (103)
.+..+.+...+-..|+.+|+.|+++ .|++|+++|-||+-|++.+.++.. +..+ +.+||+|..|...+-+.
T Consensus 200 q~aYeea~~~lF~~Ld~lE~~L~~~--ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN~~rI~dypnL~~yLr~LYq~ 277 (324)
T COG0435 200 QEAYEEAVKKLFEALDKLEQILSER--RYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCNLRRIRDYPNLWGYLRDLYQL 277 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC--eeeccccchHhhhhhhheeEeecceEEeeeecccchhhcCchHHHHHHHHhcC
Confidence 4566667777888899999999987 899999999999999999887632 2333 46799999999998776
Q ss_pred C
Q psy3262 103 P 103 (103)
Q Consensus 103 p 103 (103)
|
T Consensus 278 p 278 (324)
T COG0435 278 P 278 (324)
T ss_pred c
Confidence 5
No 64
>KOG2903|consensus
Probab=98.63 E-value=1.8e-08 Score=65.81 Aligned_cols=70 Identities=16% Similarity=0.251 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh-----hcCC---C-CCCchHHHHHHHhhc
Q psy3262 32 KKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR-----FHVD---L-RPFPIVLRIDRELEN 101 (103)
Q Consensus 32 ~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~-----~~~~---~-~~~p~l~~~~~ri~~ 101 (103)
+..+.....+-+.|+.+|+.|+++.+.|++|+++|-|||.|++.+.++.. +..+ + .+||+|..|..++-.
T Consensus 199 e~Ye~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk~iY~ 277 (319)
T KOG2903|consen 199 EAYEEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLKNIYW 277 (319)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHHHHHh
Confidence 45566667777888999999998855699999999999999998876532 2333 2 589999999998754
No 65
>KOG1422|consensus
Probab=98.37 E-value=9.6e-07 Score=56.13 Aligned_cols=65 Identities=22% Similarity=0.455 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHhhc-CCCCeeecCCCchhHHhhHHHHHHHHh----h-cCCC-CCCchHHHHHHHhhcC
Q psy3262 38 QHWIHRGLRAVEKLLSS-SAGKYCVGDDISVADCCLIPQVFNARR----F-HVDL-RPFPIVLRIDRELENH 102 (103)
Q Consensus 38 ~~~~~~~l~~le~~l~~-~~~~~l~G~~~s~ADi~l~~~~~~~~~----~-~~~~-~~~p~l~~~~~ri~~~ 102 (103)
...+-..|..|+.+|.. +.|+|+.||++|+|||.+.|=+..+.. + .+++ +.+++|.+|...+.++
T Consensus 125 e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~~lt~V~rYl~~~ya~ 196 (221)
T KOG1422|consen 125 EKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPASLTGVWRYLKNAYAR 196 (221)
T ss_pred HHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCchhhhHHHHHHHHHHhH
Confidence 34556667889999996 558999999999999999998877632 2 3443 6789999999887664
No 66
>KOG4244|consensus
Probab=98.20 E-value=2.8e-06 Score=55.78 Aligned_cols=63 Identities=30% Similarity=0.522 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh-h--cC-C--CCCCchHHHHHHHhhc
Q psy3262 37 AQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR-F--HV-D--LRPFPIVLRIDRELEN 101 (103)
Q Consensus 37 ~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~-~--~~-~--~~~~p~l~~~~~ri~~ 101 (103)
..+.+++-++.++..|+++ +|+.|+++|-+|+.++..+.-+.. + .+ | -+++|||.+|.+||.+
T Consensus 204 i~ell~rDlr~i~~~Lg~K--kflfGdkit~~DatvFgqLa~v~YP~~~~i~d~le~d~p~l~eYceRIr~ 272 (281)
T KOG4244|consen 204 IDELLHRDLRAISDYLGDK--KFLFGDKITPADATVFGQLAQVYYPFRSHISDLLEGDFPNLLEYCERIRK 272 (281)
T ss_pred HHHHHHHHHHHHHHHhCCC--ccccCCCCCcceeeehhhhhheeccCCCcHHHHHhhhchHHHHHHHHHHH
Confidence 5566788899999999998 999999999999999977765432 1 11 2 2789999999999975
No 67
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=97.70 E-value=0.00019 Score=43.00 Aligned_cols=62 Identities=19% Similarity=0.221 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh-cCCCCCCchHHHHHHHhhc
Q psy3262 35 EWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF-HVDLRPFPIVLRIDRELEN 101 (103)
Q Consensus 35 ~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~~~~~~~p~l~~~~~ri~~ 101 (103)
.....+++..|..+|..+... .. .++++|+-||.+++.+..+... |+.+. |+|.+|.++|.+
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~~--~~-~n~~LS~dDi~lFp~LR~Ltivkgi~~P--~~V~~Y~~~~s~ 120 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLASP--NA-VNGELSIDDIILFPILRSLTIVKGIQWP--PKVRAYMDRMSK 120 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SCT--TB-TTSS--HHHHHHHHHHHHHCTCTTS-----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccc--cc-cCCCCCHHHHHHHHHHhhhhhccCCcCC--HHHHHHHHHHHH
Confidence 445677888899999998853 34 4559999999999999988543 65433 789999999975
No 68
>KOG3027|consensus
Probab=97.68 E-value=0.0002 Score=45.83 Aligned_cols=65 Identities=18% Similarity=0.335 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcC---C----CCCCchHHHHHHHhhc
Q psy3262 35 EWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHV---D----LRPFPIVLRIDRELEN 101 (103)
Q Consensus 35 ~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~---~----~~~~p~l~~~~~ri~~ 101 (103)
+...+.+.+.++.|+.+|+.+ +|+.|+.+|=+|..++..+.-+..... . +.+||+|-++..||.+
T Consensus 176 DqVie~vdkc~~aLsa~L~~q--~yf~g~~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq 247 (257)
T KOG3027|consen 176 DQVIEQVDKCCRALSAQLGSQ--PYFTGDQPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQ 247 (257)
T ss_pred HHHHHHHHHHHHHHHHHhcCC--CccCCCCccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHH
Confidence 334567788899999999976 999999999999999987766543322 1 3689999999999975
No 69
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=97.60 E-value=0.00051 Score=40.91 Aligned_cols=61 Identities=20% Similarity=0.167 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh-cCCCCCCchHHHHHHHhhcC
Q psy3262 37 AQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF-HVDLRPFPIVLRIDRELENH 102 (103)
Q Consensus 37 ~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~~~~~~~p~l~~~~~ri~~~ 102 (103)
...+++..|..++..+... .. .++.+|+-||.+++.+..+... |+.+. |+|..|.++|.+.
T Consensus 61 ~i~~l~~~L~~l~~ll~~~--~~-~n~~ls~DDi~lFp~LR~Lt~vkgi~~P--~~V~~Y~~~~s~~ 122 (128)
T cd03199 61 YIAALNALLEELDPLILSS--EA-VNGQLSTDDIILFPILRNLTLVKGLVFP--PKVKAYLERMSAL 122 (128)
T ss_pred HHHHHHHHHHHHHHHHcCc--cc-cCCcCCHHHHHHHHHHhhhhhhcCCCCC--HHHHHHHHHHHHH
Confidence 4566777888888888653 33 5678999999999999987543 65433 7899999999863
No 70
>KOG3028|consensus
Probab=97.24 E-value=0.0023 Score=43.19 Aligned_cols=63 Identities=19% Similarity=0.212 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcC-------CCCCCchHHHHHHHhhc
Q psy3262 37 AQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHV-------DLRPFPIVLRIDRELEN 101 (103)
Q Consensus 37 ~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~-------~~~~~p~l~~~~~ri~~ 101 (103)
......+.+..+++.|+.+ +|+.||++|--|+.++.++..+.+... .+..+|||.++.+++.+
T Consensus 164 i~~~Aska~~~LS~~Lgs~--kffFgd~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s 233 (313)
T KOG3028|consen 164 IYKDASKALNLLSTLLGSK--KFFFGDKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRS 233 (313)
T ss_pred HHHHHHHHHHHHHHHhcCc--eEeeCCCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHH
Confidence 3444566788899999987 999999999999999999888644432 13458999999999875
No 71
>KOG3029|consensus
Probab=97.17 E-value=0.001 Score=44.63 Aligned_cols=56 Identities=11% Similarity=-0.003 Sum_probs=38.9
Q ss_pred HHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh--cCCCCCCchHHHHHHHhhc
Q psy3262 45 LRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF--HVDLRPFPIVLRIDRELEN 101 (103)
Q Consensus 45 l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~--~~~~~~~p~l~~~~~ri~~ 101 (103)
.+..-..++. +++|+.|+++++||++++..+.-+... .-|.-+..++..|+-||++
T Consensus 297 ~d~Wvaalgk-nr~flGG~kPnLaDLsvfGvl~sm~gc~afkd~~q~t~I~eW~~rmea 354 (370)
T KOG3029|consen 297 ADQWVAALGK-NRPFLGGKKPNLADLSVFGVLRSMEGCQAFKDCLQNTSIGEWYYRMEA 354 (370)
T ss_pred HHHHHHHhCC-CCCccCCCCCchhhhhhhhhhhHhhhhhHHHHHHhcchHHHHHHHHHH
Confidence 3333344544 369999999999999999888766432 1233334689999999874
No 72
>KOG1147|consensus
Probab=96.39 E-value=0.0041 Score=45.17 Aligned_cols=58 Identities=21% Similarity=0.289 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHH-Hhhc-CC-CCCCchHHHHHH
Q psy3262 38 QHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNA-RRFH-VD-LRPFPIVLRIDR 97 (103)
Q Consensus 38 ~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~-~~~~-~~-~~~~p~l~~~~~ 97 (103)
...+...+..+++.|.-. .|++|.++|+||++++..+.-- .... .- ...+-++.+|++
T Consensus 90 ~~~~s~~~~~ld~~l~~~--t~lvg~sls~Ad~aiw~~l~~n~~~~~~lk~~k~~~~v~Rw~~ 150 (712)
T KOG1147|consen 90 FDEISSSLSELDKFLVLR--TFLVGNSLSIADFAIWGALHSNGMRQEQLKAKKDYQNVERWYD 150 (712)
T ss_pred hHHHHHHHHHHHhhhhHH--HHhhccchhHHHHHHHHHHhcccchHHHHHhhCCchhhhhhcC
Confidence 445777888888888876 8999999999999999877542 1111 11 134456777765
No 73
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=92.13 E-value=0.98 Score=28.17 Aligned_cols=41 Identities=24% Similarity=0.282 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhhcC-CCCeeecCC-CchhHHhhHHHHHHHHh
Q psy3262 41 IHRGLRAVEKLLSSS-AGKYCVGDD-ISVADCCLIPQVFNARR 81 (103)
Q Consensus 41 ~~~~l~~le~~l~~~-~~~~l~G~~-~s~ADi~l~~~~~~~~~ 81 (103)
-.+.+..|++.|+.. ...|+.|+. +|-+||.++..+..+..
T Consensus 113 a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~ 155 (168)
T PF11801_consen 113 AMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLV 155 (168)
T ss_pred HHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhc
Confidence 456788889998863 236888877 99999999988877654
No 74
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=91.29 E-value=0.82 Score=29.08 Aligned_cols=60 Identities=20% Similarity=0.277 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhh-cCCCCCCchHHHHHHHhhc
Q psy3262 37 AQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRF-HVDLRPFPIVLRIDRELEN 101 (103)
Q Consensus 37 ~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~~~~~~~p~l~~~~~ri~~ 101 (103)
...+++..++.++..+.+. . -..+.+|.=||.++|.+..+... |+.+. .++..|..+|.+
T Consensus 143 ~~~~i~~dl~~l~~Li~~~--s-~~n~~l~~ddi~vFplLRnlt~v~gi~wp--s~v~dy~~~mse 203 (215)
T COG2999 143 YLKRIQADLRALDKLIVGP--S-AVNGELSEDDILVFPLLRNLTLVAGIQWP--SRVADYRDNMSE 203 (215)
T ss_pred HHHHHHHHHHHHHHHhcCc--c-hhccccchhhhhhhHHhccceecccCCCc--HHHHHHHHHHHH
Confidence 4567788888888888864 2 33566999999999999987543 65443 369999998875
No 75
>KOG1668|consensus
Probab=73.42 E-value=3.5 Score=27.13 Aligned_cols=52 Identities=23% Similarity=0.302 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHhhcCC--CCCCchHHHHHHHhhc
Q psy3262 42 HRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARRFHVD--LRPFPIVLRIDRELEN 101 (103)
Q Consensus 42 ~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~~--~~~~p~l~~~~~ri~~ 101 (103)
.+.++.++..|..+ .|+.|..+|-+|+.++..+ +.. -..+++..+|+..+.+
T Consensus 10 ~~glk~l~~sLA~k--s~~~g~~~s~edv~vf~al------~~ep~s~~~v~~~~w~~~l~a 63 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEK--SYIEGYQLSKEDVVVFAAL------GVEPQSARLVNAERWYSKLEA 63 (231)
T ss_pred hhhhhhhhHhhhcc--cCCCCCCcccccceeehhc------ccCcchhhhhHHHHHHHHHHH
Confidence 56788889999987 8999999999999877443 222 2456777788777654
No 76
>PF07056 DUF1335: Protein of unknown function (DUF1335); InterPro: IPR009766 This family represents a conserved region approximately 130 residues long within a number of proteins of unknown function that seem to be specific to the white spot syndrome virus (WSSV).
Probab=61.50 E-value=14 Score=21.97 Aligned_cols=32 Identities=28% Similarity=0.536 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhh
Q psy3262 38 QHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCL 72 (103)
Q Consensus 38 ~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l 72 (103)
...+.+.|..+|+.+.+++|++ ..++++||+-
T Consensus 42 ~~~v~~~L~~me~~l~~~g~~~---~~v~v~dICh 73 (131)
T PF07056_consen 42 PRNVTKKLKSMEQNLVKHGGKY---SMVPVVDICH 73 (131)
T ss_pred hHHHHHHHHHHHHHHHHccCCc---ceeeHHHHHH
Confidence 4667888889999998875544 5688888853
No 77
>cd06891 PX_Vps17p The phosphoinositide binding Phox Homology domain of yeast sorting nexin Vps17p. The PX domain is a phosphoinositide (PI) binding module present in many proteins with diverse functions. Sorting nexins (SNXs) make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity, and the presence of other protein-protein interaction domains, which help determine subcellular localization and specific function in the endocytic pathway. Vsp17p forms a dimer with Vps5p, the yeast counterpart of human SNX1, and is part of the retromer complex that mediates the transport of the carboxypeptidase Y receptor Vps10p from endosomes to Golgi. Similar to Vps5p and SNX1, Vps17p harbors a Bin/Amphiphysin/Rvs (BAR) domain, which detects membrane curvatur
Probab=47.52 E-value=14 Score=22.45 Aligned_cols=14 Identities=14% Similarity=0.109 Sum_probs=12.5
Q ss_pred chHHHHHHHhhcCC
Q psy3262 90 PIVLRIDRELENHP 103 (103)
Q Consensus 90 p~l~~~~~ri~~~p 103 (103)
-+|++|++||.++|
T Consensus 112 ~~LqrfL~RV~~hP 125 (140)
T cd06891 112 ANLQRWFNRVCSDP 125 (140)
T ss_pred HHHHHHHHHHhCCh
Confidence 57999999999987
No 78
>PF04827 Plant_tran: Plant transposon protein; InterPro: IPR006912 This entry represents a putative Harbinger transposase-derived nuclease, which is thought to have nuclease activity. However it does not have transposase activity [, ]. ; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=43.88 E-value=54 Score=21.33 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHH
Q psy3262 32 KKREWAQHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVF 77 (103)
Q Consensus 32 ~~~~~~~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~ 77 (103)
..++.+++-+++.+.+|..+.+--.+|--.=+.-++++|+.++++.
T Consensus 148 ~~QE~~RKDVErAFGVLQaRfaIi~~p~r~w~~~~l~~Im~aCiIL 193 (205)
T PF04827_consen 148 KHQESARKDVERAFGVLQARFAIIRGPARLWDREDLANIMRACIIL 193 (205)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHhcCchhccCHHHHHHHHHHHHHh
Confidence 3567788999999999999976322355555778999998887653
No 79
>PF10990 DUF2809: Protein of unknown function (DUF2809); InterPro: IPR021257 Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.
Probab=43.60 E-value=15 Score=20.53 Aligned_cols=18 Identities=17% Similarity=0.253 Sum_probs=15.0
Q ss_pred CCeeecCCCchhHHhhHH
Q psy3262 57 GKYCVGDDISVADCCLIP 74 (103)
Q Consensus 57 ~~~l~G~~~s~ADi~l~~ 74 (103)
|..+.|..|+..|+..+.
T Consensus 70 g~lvLG~~F~w~Dll~Y~ 87 (91)
T PF10990_consen 70 GRLVLGSTFDWWDLLAYA 87 (91)
T ss_pred hHhhcCCCCCHHHHHHHH
Confidence 346899999999998774
No 80
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=43.34 E-value=36 Score=17.15 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=19.4
Q ss_pred HHHHHHHHHhhcCCCCeeecCCC-chhHHhhH
Q psy3262 43 RGLRAVEKLLSSSAGKYCVGDDI-SVADCCLI 73 (103)
Q Consensus 43 ~~l~~le~~l~~~~~~~l~G~~~-s~ADi~l~ 73 (103)
...+.|.+.+... .|-.|+.+ |..+++--
T Consensus 4 ~i~~~l~~~I~~g--~~~~g~~lps~~~la~~ 33 (64)
T PF00392_consen 4 QIYDQLRQAILSG--RLPPGDRLPSERELAER 33 (64)
T ss_dssp HHHHHHHHHHHTT--SS-TTSBE--HHHHHHH
T ss_pred HHHHHHHHHHHcC--CCCCCCEeCCHHHHHHH
Confidence 4456666777764 89999999 99888644
No 81
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT. Lysophospholipid acyltransferase (LPLAT) superfamily member: glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB). LPLATs are acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. This subgroup includes glycerol-3-phosphate 1-acyltransferase (GPAT, PlsB).
Probab=40.92 E-value=47 Score=22.10 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=25.4
Q ss_pred HHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHH
Q psy3262 44 GLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFN 78 (103)
Q Consensus 44 ~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~ 78 (103)
.++.+++++.+.++--++.||.|.+|-.+...+..
T Consensus 10 ~~~~~~e~ip~~~~vIl~sNH~S~~Dp~ii~~~~~ 44 (235)
T cd07985 10 RFDRIEEQLAQGHNVVLLANHQTEADPAVISLLLE 44 (235)
T ss_pred HHHHHHHhccCCCCEEEEECCcccccHHHHHHHhc
Confidence 47778888886533356689999999977766543
No 82
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=40.89 E-value=83 Score=21.75 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHH
Q psy3262 40 WIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNA 79 (103)
Q Consensus 40 ~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~ 79 (103)
.+.+.+..||..-.+....--.|..+|+||+++..-..-+
T Consensus 73 ~L~~~~~~Le~ik~~~~~~~~~~~~vS~ADLivLaG~vAi 112 (297)
T cd08200 73 ELAKVLAVLEGIQKEFNESQSGGKKVSLADLIVLGGCAAV 112 (297)
T ss_pred HHHHHHHHHHHHHHHhcccccCCccccHHHHHHHHhHHHH
Confidence 3566666666554432001113457999999776544433
No 83
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=40.17 E-value=62 Score=17.44 Aligned_cols=33 Identities=15% Similarity=0.078 Sum_probs=21.3
Q ss_pred HhhHHHHHHHHhhcCC-----CCCCchHHHHHHHhhcC
Q psy3262 70 CCLIPQVFNARRFHVD-----LRPFPIVLRIDRELENH 102 (103)
Q Consensus 70 i~l~~~~~~~~~~~~~-----~~~~p~l~~~~~ri~~~ 102 (103)
|-+...+.+..+.|.+ +...|-|.+|.+-+..+
T Consensus 32 iR~M~L~~~wR~~G~~i~F~~La~~PTl~aW~qLl~~~ 69 (74)
T COG3433 32 IRMMALLERWRKRGADIDFAQLAANPTLAAWWQLLSTR 69 (74)
T ss_pred HHHHHHHHHHHHcCCcccHHHHHhCccHHHHHHHHHhc
Confidence 3444455556555543 35779999999988754
No 84
>COG5625 Predicted transcription regulator containing HTH domain [Transcription]
Probab=37.13 E-value=85 Score=18.14 Aligned_cols=27 Identities=19% Similarity=0.137 Sum_probs=22.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy3262 29 GEEKKREWAQHWIHRGLRAVEKLLSSS 55 (103)
Q Consensus 29 ~~~~~~~~~~~~~~~~l~~le~~l~~~ 55 (103)
.|++..+...+.+.+.+..+|+.+.+.
T Consensus 84 ~P~k~leei~~~i~keiEelEk~~k~e 110 (113)
T COG5625 84 PPPKPLEEIEEEIMKEIEELEKEFKNE 110 (113)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 356788888999999999999998764
No 85
>PHA02776 E7 protein; Provisional
Probab=37.12 E-value=12 Score=21.45 Aligned_cols=14 Identities=21% Similarity=0.209 Sum_probs=11.7
Q ss_pred eecCCCchhHHhhH
Q psy3262 60 CVGDDISVADCCLI 73 (103)
Q Consensus 60 l~G~~~s~ADi~l~ 73 (103)
+.|.++|+-||.+-
T Consensus 1 M~G~~pTl~DIvL~ 14 (101)
T PHA02776 1 MHGKHPTLKDIVLD 14 (101)
T ss_pred CCCCCCcHhHeeee
Confidence 46999999999873
No 86
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function []. This domain is found in tafazzins, defects in which are the cause of Barth syndrome; a severe inherited disorder which is often fatal in childhood and is characterised by cardiac and skeletal abnormalities. Phospholipid/glycerol acyltransferase is not found in the viruses or the archaea and is under represented in the bacteria. Bacterial glycerol-phosphate acyltransferases are involved in membrane biogenesis since they use fatty acid chains to form the first membrane phospholipids [].; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1IUQ_A 1K30_A.
Probab=33.77 E-value=37 Score=19.30 Aligned_cols=21 Identities=19% Similarity=0.176 Sum_probs=13.1
Q ss_pred CCeeecCCCchhHHhhHHHHH
Q psy3262 57 GKYCVGDDISVADCCLIPQVF 77 (103)
Q Consensus 57 ~~~l~G~~~s~ADi~l~~~~~ 77 (103)
+--++++|.|..|..+...+.
T Consensus 15 ~~i~v~NH~s~~D~~~l~~~~ 35 (132)
T PF01553_consen 15 GVIFVSNHQSWLDGFALMALL 35 (132)
T ss_dssp EEEEEE----TTHHHHHHHHH
T ss_pred CEEEEecCCCCCcchheeehh
Confidence 346679999999998887766
No 87
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=32.28 E-value=1.5e+02 Score=21.66 Aligned_cols=48 Identities=21% Similarity=0.153 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHhh-cCC--------CCeeecCCCchhHHhhHHHHHHHHhhcC
Q psy3262 35 EWAQHWIHRGLRAVEKLLS-SSA--------GKYCVGDDISVADCCLIPQVFNARRFHV 84 (103)
Q Consensus 35 ~~~~~~~~~~l~~le~~l~-~~~--------~~~l~G~~~s~ADi~l~~~~~~~~~~~~ 84 (103)
+..+.++..+++.||++|+ ..+ |+||+. +...|=+.--.+..++..|+
T Consensus 314 ~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIs--ld~~~G~AkrvV~lakeAGV 370 (425)
T PF12897_consen 314 AILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFIS--LDVLDGTAKRVVELAKEAGV 370 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EE--EEESTT-HHHHHHHHHHTTE
T ss_pred HHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEE--EecCCChHHHHHHHHHHhCc
Confidence 3346777888999999999 322 678876 66666565556666655543
No 88
>cd08533 SAM_PNT-ETS-1,2 Sterile alpha motif (SAM)/Pointed domain of ETS-1,2 family. SAM Pointed domain of ETS-1,2 family of transcriptional activators is a protein-protein interaction domain. It carries a kinase docking site and mediates interaction between ETS transcriptional activators and protein kinases. This group of transcriptional factors is involved in the Ras/MAP kinase signaling pathway. MAP kinases phosphorylate the transcription factors. Phosphorylated factors then recruit coactivators and enhance transactivation. Members of this group play a role in regulation of different embryonic developmental processes. ETS-1,2 transcriptional activators are proto-oncogenes involved in malignant transformation and tumor progression. They are potential molecular targets for selective cancer therapy.
Probab=30.05 E-value=47 Score=17.70 Aligned_cols=16 Identities=13% Similarity=-0.029 Sum_probs=13.3
Q ss_pred hhHHHHHHHHHHcCCC
Q psy3262 2 IGKVREICEVIASGIQ 17 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~ 17 (103)
+.+|.+|+.|...++.
T Consensus 9 ~~~V~~WL~Wa~~ef~ 24 (71)
T cd08533 9 ETHVRQWLLWAVNEFS 24 (71)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 5789999999998754
No 89
>cd08540 SAM_PNT-ERG Sterile alpha motif (SAM)/Pointed domain of ERG transcription factor. SAM Pointed domain of ERG subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It may participate in formation of homodimers or heterodimers with ETS-2, Fli-1, ER81, and Pu-1. However, dimeric forms are inactive and SAM Pointed domain is not essential for dimerization, since ER81 and Pu-1 do not have it. In mouse, a regulator of this type binds the ESET histone H3-specific methyltransferase (human homolog is SETDB1), followed by modification of local chromatin structure through histone methylation. ERG regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. The Erg gene is a proto-oncogene. It is a target of chromosomal translocations resulting in fusions with new neighboring genes. Chimeric proteins were found in solid tumors such as myeloid leukemia or Ewing's sarcoma. Members of this subfamily are po
Probab=29.77 E-value=44 Score=18.02 Aligned_cols=16 Identities=19% Similarity=0.096 Sum_probs=13.3
Q ss_pred hhHHHHHHHHHHcCCC
Q psy3262 2 IGKVREICEVIASGIQ 17 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~ 17 (103)
+.+|.+|+.|+..++.
T Consensus 10 ~~~V~~WL~Wa~~ef~ 25 (75)
T cd08540 10 TDHVRQWLEWAVKEYG 25 (75)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 5789999999998753
No 90
>cd08535 SAM_PNT-Tel_Yan Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein. SAM Pointed domain of Tel (Translocation, Ets, Leukemia)/Yan subfamily of ETS transcriptional repressors is a protein-protein interaction domain. SAM Pointed domains of this type of regulators can interact with each other, forming head-to-tail homodimers or homooligomers, and/or interact with SAM Pointed domains of another subfamily of ETS factors forming heterodimers. The oligomeric form is able to block transcription of target genesand is involved in MAPK signaling. They participate in regulation of different processes during embryo development including hematopoietic differentiation and eye development. Tel/Yan transcriptional factors are frequent targets of chromosomal translocations resulting in fusions of SAM domain with new neighboring genes. Such chimeric proteins were found in different tumors. Members of this subfamily are potential targets for cancer therapy.
Probab=29.42 E-value=53 Score=17.31 Aligned_cols=16 Identities=6% Similarity=-0.078 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHcCCC
Q psy3262 2 IGKVREICEVIASGIQ 17 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~ 17 (103)
+.+|.+|+.|...++.
T Consensus 8 ~~~V~~WL~wa~~ef~ 23 (68)
T cd08535 8 RDDVLQWLRWAENEFS 23 (68)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5789999999998754
No 91
>cd08539 SAM_PNT-ESE-3-like Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators. SAM Pointed domain of ESE-3-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. The ESE-3 transcriptional activator is involved in regulation of glandular epithelium differentiation through the MAP kinase signaling cascade. It is found to be expressed in glandular epithelium of prostate, pancreas, salivary gland, and trachea. Additionally, ESE-3 is differentially expressed during monocyte-derived dendritic cells development. DNA binding consensus motif for ESE-3 consists of purine-rich GGAA/T core sequence. The expression profiles of these factors are altered in epithelial cancers. Members of this subfamily are potential targets for cancer therapy.
Probab=29.17 E-value=79 Score=17.07 Aligned_cols=17 Identities=12% Similarity=0.091 Sum_probs=13.7
Q ss_pred hhHHHHHHHHH--HcCCCC
Q psy3262 2 IGKVREICEVI--ASGIQP 18 (103)
Q Consensus 2 ra~~~~~~~~~--~~~l~~ 18 (103)
+.+|.+|+.|. .+.+..
T Consensus 10 k~~V~~WL~~~~~~~~~~~ 28 (74)
T cd08539 10 KYQVWEWLQHLLDTNQLDA 28 (74)
T ss_pred HHHHHHHHHHHHHHcCCCc
Confidence 67899999999 666654
No 92
>cd08542 SAM_PNT-ETS-1 Sterile alpha motif (SAM)/Pointed domain of ETS-1. SAM Pointed domain of ETS-1 subfamily of ETS transcriptional activators is a protein-protein interaction domain. The ETS-1 activator is regulated by phosphorylation. It contains a docking site for the ERK2 MAP (Mitogen Activated Protein) kinase, while the ERK2 phosphorylation site is located in the N-terminal disordered region upstream of the SAM Pointed domain. Mutations of the kinase docking site residues inhibit phosphorylation. ETS-1 activators play role in a number of different physiological processes, and they are expressed during embryonic development, including blood vessel formation, hematopoietic, lymphoid, neuronal and osteogenic differentiation. The Ets-1 gene is a proto-oncogene involved in progression of different tumors (including breast cancer, meningioma, and prostate cancer). Members of this subfamily are potential molecular targets for selective cancer therapy.
Probab=28.72 E-value=46 Score=18.59 Aligned_cols=16 Identities=13% Similarity=0.040 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHcCCC
Q psy3262 2 IGKVREICEVIASGIQ 17 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~ 17 (103)
+.+|.+|+.|...++.
T Consensus 24 ~~~V~~WL~Wa~~ef~ 39 (88)
T cd08542 24 ETHVRDWVMWAVNEFS 39 (88)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 5789999999998764
No 93
>cd08531 SAM_PNT-ERG_FLI-1 Sterile alpha motif (SAM)/Pointed domain of ERG (Ets related gene) and FLI-1 (Friend leukemia integration 1) transcription factors. SAM Pointed domain of ERG/FLI-1 subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The ERG and FLI regulators are involved in endothelial cell differentiation, bone morphogenesis and neural crest development. They are proto-oncogenes implicated in cancer development such as myeloid leukemia, Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.
Probab=28.50 E-value=53 Score=17.66 Aligned_cols=16 Identities=19% Similarity=0.040 Sum_probs=13.4
Q ss_pred hhHHHHHHHHHHcCCC
Q psy3262 2 IGKVREICEVIASGIQ 17 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~ 17 (103)
+.+|.+|+.|+..++.
T Consensus 10 ~~~V~~WL~Wa~~ef~ 25 (75)
T cd08531 10 REHVRQWLEWAVKEYG 25 (75)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 5789999999998754
No 94
>PF04405 ScdA_N: Domain of Unknown function (DUF542) ; InterPro: IPR007500 This is a domain of unknown function found at the N terminus of genes involved in cell wall development and nitrous oxide protection. ScdA is required for normal cell growth and development; mutants have an increased level of peptidoglycan cross-linking and aberrant cellular morphology suggesting a role for ScdA in cell wall metabolism []. NorA1, NorA2, and YtfE are involved in the nitrous oxide response. NorA1 and NorA2, which are similar to YtfE, are co-transcribed with the membrane-bound nitrous oxide (NO) reductases. The genes appear to be involved in NO protection but their function is unknown [, ].
Probab=26.55 E-value=98 Score=15.56 Aligned_cols=14 Identities=29% Similarity=1.006 Sum_probs=11.3
Q ss_pred CeeecCCCchhHHh
Q psy3262 58 KYCVGDDISVADCC 71 (103)
Q Consensus 58 ~~l~G~~~s~ADi~ 71 (103)
.|.+|+..|+++.+
T Consensus 25 DfCCgG~~~L~eA~ 38 (56)
T PF04405_consen 25 DFCCGGNRSLEEAC 38 (56)
T ss_pred cccCCCCchHHHHH
Confidence 58888888888765
No 95
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=25.96 E-value=48 Score=20.22 Aligned_cols=16 Identities=19% Similarity=0.216 Sum_probs=10.8
Q ss_pred CeeecCCCchhHHhhH
Q psy3262 58 KYCVGDDISVADCCLI 73 (103)
Q Consensus 58 ~~l~G~~~s~ADi~l~ 73 (103)
.-+++..+..||++..
T Consensus 102 rilvs~~~~aaDa~AS 117 (146)
T PF04763_consen 102 RILVSRECDAADAYAS 117 (146)
T ss_pred cceecccccHHHHHhc
Confidence 4566777777777655
No 96
>PF00527 E7: E7 protein, Early protein; InterPro: IPR000148 This family includes the E7 oncoprotein from various papillomaviruses []. Along with E5 and E6 their activities seem to be especially important for viral oncogenesis. E5 is located at the cell surface and reduces cell gap-gap junction communication. In cervical cancer E5 is expressed in earlier stages of neoplastic transformation of the cervical epithelium during viral infection. The role of E7 is less well understood but it has been shown to impede growth arrest signals in both NIH 3T3 cells and HFKs and that this correlates with elevated cdc25A gene expression. This deregulation of cdc25A is linked to disruption of cell cycle arrest [].; GO: 0003677 DNA binding, 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2F8B_A 2EWL_A 2B9D_A.
Probab=24.97 E-value=24 Score=19.75 Aligned_cols=12 Identities=25% Similarity=0.418 Sum_probs=0.0
Q ss_pred cCCCchhHHhhH
Q psy3262 62 GDDISVADCCLI 73 (103)
Q Consensus 62 G~~~s~ADi~l~ 73 (103)
|+++|+-||.+-
T Consensus 1 G~~ptl~DIvL~ 12 (92)
T PF00527_consen 1 GKEPTLKDIVLE 12 (92)
T ss_dssp ------------
T ss_pred CCCCccccEEee
Confidence 788999999875
No 97
>PRK12276 putative heme peroxidase; Provisional
Probab=23.93 E-value=43 Score=22.44 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=17.4
Q ss_pred HHhhcCCCCeeecCCCchhHHhhH
Q psy3262 50 KLLSSSAGKYCVGDDISVADCCLI 73 (103)
Q Consensus 50 ~~l~~~~~~~l~G~~~s~ADi~l~ 73 (103)
.+.... |||++|..++.+|+.-.
T Consensus 223 a~~~ef-gpFy~G~r~~~~~l~~~ 245 (248)
T PRK12276 223 ARYGEF-GSFFVGNILPAEELLQF 245 (248)
T ss_pred HHhhcc-cCceeeeeCCHHHHHHH
Confidence 344443 79999999999998643
No 98
>cd08543 SAM_PNT-ETS-2 Sterile alpha motif (SAM)/Pointed domain of ETS-2. SAM Pointed domain of ETS-2 subfamily of ETS transcriptional regulators is a protein-protein interaction domain. It contains a docking site for Cdk10 (cyclin-dependent kinase 10), a member of the Cdc2 kinase family. The interaction between ETS-2 and Cdk10 kinase inhibits ETS-2 transactivation activity in mammals. ETS-2 is also regulated by ERK2 MAP kinase. ETS-2, which is phosphorylated by ERK2, can interact with coactivators and enhance transactivation. ETS-2 transcriptional activators are involved in embryonic development and cell cycle control. The Ets-2 gene is a proto-oncogene. It is overexpressed in breast and prostate cancer cells and its overexpression is necessary for transformation of such cells. Members of ETS-2 subfamily are potential molecular targets for selective cancer therapy.
Probab=23.40 E-value=66 Score=18.00 Aligned_cols=16 Identities=6% Similarity=-0.141 Sum_probs=13.2
Q ss_pred hhHHHHHHHHHHcCCC
Q psy3262 2 IGKVREICEVIASGIQ 17 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~ 17 (103)
+.+|.+|+.|...++.
T Consensus 24 ~~~V~~WL~Wa~~ef~ 39 (89)
T cd08543 24 EQQVCQWLLWATNEFS 39 (89)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 5789999999988754
No 99
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=22.75 E-value=2.9e+02 Score=20.16 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHHHHHHh
Q psy3262 38 QHWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQVFNARR 81 (103)
Q Consensus 38 ~~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~~ 81 (103)
...+.+.+..||..-.+ | +..+|+||++...-..-+..
T Consensus 109 N~gL~~a~~~L~pik~k----~--~~~iS~ADL~~LaG~~AiE~ 146 (409)
T cd00649 109 NVNLDKARRLLWPIKQK----Y--GNKISWADLMILAGNVALES 146 (409)
T ss_pred hhhHHHHHHHHHHHHHH----c--CCCccHHHHHHHHHHHHHHH
Confidence 34667777777765554 4 35799999977755544433
No 100
>cd08536 SAM_PNT-Mae Sterile alpha motif (SAM)/Pointed domain of Mae protein homolog. Mae (Modulator of the Activity of ETS) subfamily represents a group of SAM Pointed monodomain proteins. SAM Pointed domain is a protein-protein interaction domain. It can interact with other SAM pointed domains forming head-to-tail heterodimers and also provides a kinase docking site. For example, in Drosophila Mae is required for facilitating phosphorylation of the Yan factor and for blocking phosphorylation of the ETS-2 regulator. Mae interacts with the SAM Pointed domains of Yan and ETS-2. Binding enhances access of the kinase to the Yan phosphorylation site by providing a kinase docking site, or inhibits phosphorylation of ETS-2 by blocking its docking site. This type of factors participates in regulation of kinase signaling particularly during embryogenesis.
Probab=22.53 E-value=84 Score=16.40 Aligned_cols=16 Identities=19% Similarity=0.131 Sum_probs=13.3
Q ss_pred hhHHHHHHHHHHcCCC
Q psy3262 2 IGKVREICEVIASGIQ 17 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~ 17 (103)
+.+|.+|+.|+..++.
T Consensus 7 ~~~V~~WL~w~~~ef~ 22 (66)
T cd08536 7 REHVRTWLRWVSARYQ 22 (66)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 5789999999988754
No 101
>PF13677 MotB_plug: Membrane MotB of proton-channel complex MotA/MotB
Probab=22.51 E-value=91 Score=15.70 Aligned_cols=14 Identities=21% Similarity=0.235 Sum_probs=9.5
Q ss_pred CchhHHhhHHHHHH
Q psy3262 65 ISVADCCLIPQVFN 78 (103)
Q Consensus 65 ~s~ADi~l~~~~~~ 78 (103)
+|+||++..-++.+
T Consensus 19 vtyaDlmTLLl~fF 32 (58)
T PF13677_consen 19 VTYADLMTLLLAFF 32 (58)
T ss_pred HHHHHHHHHHHHHH
Confidence 79999966544433
No 102
>PF09849 DUF2076: Uncharacterized protein conserved in bacteria (DUF2076); InterPro: IPR018648 This family of hypothetical prokaryotic proteins has no known function but includes putative perimplasmic ligand-binding sensor proteins.
Probab=22.39 E-value=1.8e+02 Score=19.55 Aligned_cols=20 Identities=20% Similarity=0.167 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy3262 33 KREWAQHWIHRGLRAVEKLL 52 (103)
Q Consensus 33 ~~~~~~~~~~~~l~~le~~l 52 (103)
+++.+.++.+...+.||.+|
T Consensus 52 vQE~AL~~a~~ri~eLe~ql 71 (247)
T PF09849_consen 52 VQEQALKQAQARIQELEAQL 71 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56777888888899999997
No 103
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=22.33 E-value=98 Score=23.55 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhhcCCCCeeecCCCchhHHhhHH
Q psy3262 39 HWIHRGLRAVEKLLSSSAGKYCVGDDISVADCCLIP 74 (103)
Q Consensus 39 ~~~~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~ 74 (103)
.++.++|..+|..-... +.++|+||+.+..
T Consensus 507 ~~l~kvl~~le~iq~~f------nkkvSlADlIVL~ 536 (730)
T COG0376 507 AELAKVLAVLEKIQKEF------NKKVSLADLIVLG 536 (730)
T ss_pred HHHHHHHHHHHHHHHHh------cCccchhHheeec
Confidence 56788888888876653 2779999997653
No 104
>COG3253 ywfI Predicted heme peroxidase involved in anaerobic stress response [General function prediction only]
Probab=22.08 E-value=71 Score=21.21 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=16.6
Q ss_pred HHhhcCCCCeeecCCCchhHHh
Q psy3262 50 KLLSSSAGKYCVGDDISVADCC 71 (103)
Q Consensus 50 ~~l~~~~~~~l~G~~~s~ADi~ 71 (103)
++..+. |||++|..+.++|+.
T Consensus 206 ~~~~~e-~pff~G~~~~~~~l~ 226 (230)
T COG3253 206 KWIGEE-TPFFVGRRVPLEDLP 226 (230)
T ss_pred HHHhcc-CCeeeecccCHHHhh
Confidence 445553 799999999999985
No 105
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=22.01 E-value=1.8e+02 Score=19.06 Aligned_cols=17 Identities=18% Similarity=0.049 Sum_probs=10.8
Q ss_pred CCCchhHHhhHHHHHHH
Q psy3262 63 DDISVADCCLIPQVFNA 79 (103)
Q Consensus 63 ~~~s~ADi~l~~~~~~~ 79 (103)
+.+|.|||..+.-..-+
T Consensus 72 ~~VS~ADiialAa~~av 88 (230)
T PF00141_consen 72 GVVSCADIIALAARDAV 88 (230)
T ss_dssp TTS-HHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhhhcc
Confidence 36999999776544433
No 106
>PF09340 NuA4: Histone acetyltransferase subunit NuA4; InterPro: IPR015418 The NuA4 histone acetyltransferase (HAT) multisubunit complex is responsible for acetylation of histone H4 and H2A N-terminal tails in yeast []. NuA4 complexes are highly conserved in eukaryotes and play primary roles in transcription, cellular response to DNA damage, and cell cycle control [].
Probab=21.96 E-value=39 Score=18.39 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHhhcCCCCeee
Q psy3262 38 QHWIHRGLRAVEKLLSSSAGKYCV 61 (103)
Q Consensus 38 ~~~~~~~l~~le~~l~~~~~~~l~ 61 (103)
++.+.+.|..||+++-+.++.||-
T Consensus 11 k~~Le~~L~~lE~qIy~~Et~YL~ 34 (80)
T PF09340_consen 11 KKKLEKDLAALEKQIYDKETSYLE 34 (80)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778888888887654455654
No 107
>cd08541 SAM_PNT-FLI-1 Sterile alpha motif (SAM)/Pointed domain of friend leukemia integration 1 transcription activator. SAM Pointed domain of FLI-1 (Friend Leukemia Integration) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. The FLI-1 protein participates in regulation of cellular differentiation, proliferation, and survival. The Fli-1 gene was initially described in Friend virus-induced erythroleukemias as a site for virus integration. It is highly expressed in hematopoietic tissues and at lower level in lungs, heart, and ovaries. Fli-1 is a proto-oncogene implicated in Ewing's sarcoma and erythroleukemia. Members of this subfamily are potential targets for cancer therapy.
Probab=21.85 E-value=77 Score=17.82 Aligned_cols=16 Identities=19% Similarity=0.032 Sum_probs=13.3
Q ss_pred hhHHHHHHHHHHcCCC
Q psy3262 2 IGKVREICEVIASGIQ 17 (103)
Q Consensus 2 ra~~~~~~~~~~~~l~ 17 (103)
+.+|.+|+.|+..++.
T Consensus 22 ~~hV~~WL~Wa~~ef~ 37 (91)
T cd08541 22 QEHVRQWLEWAIKEYG 37 (91)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 5689999999998754
No 108
>PF10675 DUF2489: Protein of unknown function (DUF2489); InterPro: IPR019617 This entry represents bacterial uncharacterised proteins.
Probab=21.77 E-value=1.5e+02 Score=17.77 Aligned_cols=18 Identities=11% Similarity=0.307 Sum_probs=16.2
Q ss_pred CCCCchHHHHHHHhhcCC
Q psy3262 86 LRPFPIVLRIDRELENHP 103 (103)
Q Consensus 86 ~~~~p~l~~~~~ri~~~p 103 (103)
.++||.+...++.+...|
T Consensus 76 ~~~y~a~~~ly~~v~~mP 93 (131)
T PF10675_consen 76 DSDYPAFYELYEVVKHMP 93 (131)
T ss_pred ccCChHHHHHHHHHccCC
Confidence 478999999999999887
No 109
>KOG3284|consensus
Probab=20.87 E-value=1.3e+02 Score=19.52 Aligned_cols=36 Identities=14% Similarity=-0.010 Sum_probs=21.9
Q ss_pred CchhHHhhHHHHHHHHhhcCCCCCCchHHHHHHHhhcC
Q psy3262 65 ISVADCCLIPQVFNARRFHVDLRPFPIVLRIDRELENH 102 (103)
Q Consensus 65 ~s~ADi~l~~~~~~~~~~~~~~~~~p~l~~~~~ri~~~ 102 (103)
+-+.|++.. +..+...+.|.+.--++.+|..|+.+.
T Consensus 149 PlL~dL~~s--mnrls~~p~dfe~r~Kv~~Wl~rls~M 184 (213)
T KOG3284|consen 149 PLLSDLSAS--MNRLSRLPPDFEGRTKVKQWLIRLSKM 184 (213)
T ss_pred chHHHHHHH--HHhhccCCccchhHHHHHHHHHHHhcc
Confidence 445555443 334444455666667899999998753
No 110
>COG4041 Predicted membrane protein [Function unknown]
Probab=20.62 E-value=2.2e+02 Score=17.40 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=24.2
Q ss_pred HHHHhhcCCCCeeecCCCchhHHhhHHHHHHHH
Q psy3262 48 VEKLLSSSAGKYCVGDDISVADCCLIPQVFNAR 80 (103)
Q Consensus 48 le~~l~~~~~~~l~G~~~s~ADi~l~~~~~~~~ 80 (103)
+|++-.+-.|+||.|+-.+--|.+....+.-..
T Consensus 48 ie~rggdlaggyfmgnivcspdasagtllasig 80 (171)
T COG4041 48 IEDRGGDLAGGYFMGNIVCSPDASAGTLLASIG 80 (171)
T ss_pred HHHhCCccccceeecceeeCCCccchhHHHHhh
Confidence 455555444789999999999988887776543
No 111
>PF13227 DUF4035: Protein of unknown function (DUF4035)
Probab=20.59 E-value=68 Score=16.15 Aligned_cols=12 Identities=17% Similarity=0.271 Sum_probs=9.3
Q ss_pred cCCCchhHHhhH
Q psy3262 62 GDDISVADCCLI 73 (103)
Q Consensus 62 G~~~s~ADi~l~ 73 (103)
|.++++.|+++.
T Consensus 30 g~k~~l~D~mp~ 41 (53)
T PF13227_consen 30 GKKPKLSDFMPF 41 (53)
T ss_pred CCCCcHHHHHhh
Confidence 456999998765
No 112
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=20.29 E-value=1.8e+02 Score=19.23 Aligned_cols=31 Identities=32% Similarity=0.483 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhhcCCCCeeecCCCchhHHhhHHHH
Q psy3262 42 HRGLRAVEKLLSSSAGKYCVGDDISVADCCLIPQV 76 (103)
Q Consensus 42 ~~~l~~le~~l~~~~~~~l~G~~~s~ADi~l~~~~ 76 (103)
.+.++.||..-.+.++ .+.+|.|||..+.-.
T Consensus 61 ~~~~~~l~~ik~~~~~----~~~vS~ADlialAa~ 91 (255)
T cd00314 61 DKALRALEPIKSAYDG----GNPVSRADLIALAGA 91 (255)
T ss_pred HHHHHHHHHHHHHcCC----CCcccHHHHHHHHHH
Confidence 4677777776555422 678999999655433
No 113
>PF12523 DUF3725: Protein of unknown function (DUF3725); InterPro: IPR022199 This domain family is found in viruses, and is approximately 70 amino acids in length. The family is found in association with PF01577 from PFAM. There is a conserved FLE sequence motif.
Probab=20.12 E-value=1.3e+02 Score=16.04 Aligned_cols=28 Identities=21% Similarity=0.205 Sum_probs=18.2
Q ss_pred CeeecCCCchhHHhhHHHHHHHHhhcCC
Q psy3262 58 KYCVGDDISVADCCLIPQVFNARRFHVD 85 (103)
Q Consensus 58 ~~l~G~~~s~ADi~l~~~~~~~~~~~~~ 85 (103)
.|+-|++.+-|||.=..-=.+....+.|
T Consensus 27 ~FLEg~~~~Ra~ifeivrktmvg~LgYd 54 (74)
T PF12523_consen 27 TFLEGNRFRRADIFEIVRKTMVGRLGYD 54 (74)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHhcCC
Confidence 6888999999988655433334444444
Done!