BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3264
(156 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332375054|gb|AEE62668.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/168 (69%), Positives = 127/168 (75%), Gaps = 29/168 (17%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MPK+ D KPRGRMTAYAFFVQ CREEHKKKHPEENVVFAEFSKKCAERWKTM +KEKKRF
Sbjct: 111 MPKKGDSKPRGRMTAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKTMLDKEKKRF 170
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK-----------------------------RGKIKQ 91
HEMA+ DKKRYDTEMQSYTPP GEK RGK+K
Sbjct: 171 HEMAETDKKRYDTEMQSYTPPKGEKQRGKKRKQIKDPNAPKRSLSAFFWFSNDERGKVKA 230
Query: 92 DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
NPEYGVGDIAKELG++WAD DP V++K+E +A+KDK RYEKEMTAYK
Sbjct: 231 QNPEYGVGDIAKELGRRWADADPEVRSKFEALADKDKIRYEKEMTAYK 278
>gi|193664382|ref|XP_001944154.1| PREDICTED: hypothetical protein LOC100167132 [Acyrthosiphon pisum]
Length = 410
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/173 (68%), Positives = 128/173 (73%), Gaps = 31/173 (17%)
Query: 1 MPKEK--DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKK 58
MP+ K D KPRGRMTAYAFFVQ CREEHKKKHP+ENV+FAEFSKKCAERWKTM+EKEKK
Sbjct: 186 MPRGKGTDAKPRGRMTAYAFFVQTCREEHKKKHPDENVIFAEFSKKCAERWKTMNEKEKK 245
Query: 59 RFHEMADKDKKRYDTEMQSYTPPAGEK-----------------------------RGKI 89
RFHEMADKDK RYDTEMQSY PP GEK RGK+
Sbjct: 246 RFHEMADKDKLRYDTEMQSYIPPKGEKVRGKKRKQIKDPNAPKRSLSAFFWFCNDERGKV 305
Query: 90 KQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K NPEYGVGD+AKELGKKW+D D +VK KYE MAEKDKARYE+EMT YKN+
Sbjct: 306 KAVNPEYGVGDVAKELGKKWSDADITVKQKYEAMAEKDKARYEREMTEYKNKG 358
>gi|307192728|gb|EFN75836.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 445
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 135/200 (67%), Gaps = 44/200 (22%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP+ KD KPRGRMTAYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWKTMS+KEKKRF
Sbjct: 246 MPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRF 305
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------------RGKIK 90
HEMA+KDKKRYD EMQ+YTPP GE RGK+K
Sbjct: 306 HEMAEKDKKRYDAEMQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVK 365
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR--------S 142
NPEYGVGDIAKELGKKW+D DP K+KYE MAEKDKARYE+EMTAYK +
Sbjct: 366 MLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMQDGAPVVG 425
Query: 143 VAPVN------EEADEEDDE 156
AP N EE +EDDE
Sbjct: 426 GAPANTVKSDSEEEWKEDDE 445
>gi|332025497|gb|EGI65660.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 305
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/169 (67%), Positives = 124/169 (73%), Gaps = 30/169 (17%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP+ KD KPRGRMTAYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWKTMS+ EKKRF
Sbjct: 103 MPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRF 162
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------------RGKIK 90
HEMA+KDKKRYDTEMQ+YTPP GE RGK+K
Sbjct: 163 HEMAEKDKKRYDTEMQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVK 222
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
NPEYGVGDIAKELGKKW+D DP K+KYE MAEKDKARYE+EMTAYK
Sbjct: 223 MLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYK 271
>gi|350402647|ref|XP_003486555.1| PREDICTED: high mobility group protein DSP1-like [Bombus impatiens]
Length = 456
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 136/199 (68%), Gaps = 43/199 (21%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP+ KD KPRGRMTAYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWKTMS+KEKKRF
Sbjct: 258 MPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRF 317
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------------RGKIK 90
HEMA+KDKKRYD EMQ+YTPP GE RGK+K
Sbjct: 318 HEMAEKDKKRYDAEMQNYTPPKGESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVK 377
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN--RSVAPV-- 146
NPE+GVGDIAKELGKKW+D DP K+KYE MAEKDKARYE+EMTAYK + APV
Sbjct: 378 MLNPEFGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMKDGAPVVG 437
Query: 147 ---------NEEADEEDDE 156
+EE +EDDE
Sbjct: 438 VPANTVKSDSEEEYKEDDE 456
>gi|380025638|ref|XP_003696576.1| PREDICTED: high mobility group protein DSP1-like [Apis florea]
Length = 420
Score = 224 bits (572), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 136/199 (68%), Gaps = 43/199 (21%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP+ KD KPRGRMTAYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWKTMS+KEKKRF
Sbjct: 222 MPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRF 281
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------------RGKIK 90
HEMA+KDKKRYD EMQ+YTPP GE RGK+K
Sbjct: 282 HEMAEKDKKRYDAEMQNYTPPKGESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVK 341
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN--RSVAPV-- 146
NPE+GVGDIAKELGKKW+D DP K+KYE MAEKDKARYE+EMTAYK + APV
Sbjct: 342 MLNPEFGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKMKDGAPVVG 401
Query: 147 ---------NEEADEEDDE 156
+EE +EDDE
Sbjct: 402 VPANTVKSDSEEEYKEDDE 420
>gi|322797840|gb|EFZ19748.1| hypothetical protein SINV_09636 [Solenopsis invicta]
Length = 203
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 125/171 (73%), Gaps = 30/171 (17%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP+ KD KPRGRMTAYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWKTMS+ EKKRF
Sbjct: 1 MPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------------RGKIK 90
HEMA+KDKKRYDTEMQ+YTPP GE RGK+K
Sbjct: 61 HEMAEKDKKRYDTEMQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVK 120
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
NPEYGVGDIAKELGKKW+D DP K+KYE MAEKDKARYE+EMTAYK +
Sbjct: 121 MLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKK 171
>gi|307191141|gb|EFN74839.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 305
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/202 (59%), Positives = 135/202 (66%), Gaps = 46/202 (22%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP+ KD KPRGRMTAYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWKTMS+ EKKRF
Sbjct: 104 MPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDIEKKRF 163
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------------RGKIK 90
HEMA+KDKKRYD EMQ+YTPP GE RGK+K
Sbjct: 164 HEMAEKDKKRYDAEMQNYTPPKGENKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVK 223
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK----------- 139
NPEYGVGDIAKELGKKW+D DP K+KYE MAEKDKARYE+EMTAYK
Sbjct: 224 MLNPEYGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYKKKIQNDGAPMM 283
Query: 140 -----NRSVAPVNEEADEEDDE 156
N++V +EE +EDDE
Sbjct: 284 GGAPANQTVKSDSEEEWKEDDE 305
>gi|156552179|ref|XP_001605958.1| PREDICTED: high mobility group protein DSP1 [Nasonia vitripennis]
Length = 433
Score = 222 bits (565), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 121/166 (72%), Gaps = 31/166 (18%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K KPRGRMTAYAFFVQ CR+EHKKKHP+EN+VF EFSKKCA RWKTMS+KEKKRFHEMA
Sbjct: 236 KSTKPRGRMTAYAFFVQTCRQEHKKKHPDENIVFQEFSKKCALRWKTMSDKEKKRFHEMA 295
Query: 65 DKDKKRYDTEMQSYTPPAGEK-------------------------------RGKIKQDN 93
+KDKKRYDTEMQSY PP GEK RGK+K N
Sbjct: 296 EKDKKRYDTEMQSYIPPKGEKVTGRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKMLN 355
Query: 94 PEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
PEYGVGDIAKELGKKW+D P +K KYE MAEKDKARYE+EMTAYK
Sbjct: 356 PEYGVGDIAKELGKKWSDAGPELKGKYEAMAEKDKARYEREMTAYK 401
>gi|189236107|ref|XP_973934.2| PREDICTED: similar to High mobility group protein DSP1 (Protein
dorsal switch 1) [Tribolium castaneum]
Length = 505
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 111/173 (64%), Positives = 129/173 (74%), Gaps = 30/173 (17%)
Query: 1 MPKEK-DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
MP+ K D +PRGRMTAYAFFVQ CREEHKKKHPEENVVFAEFSKKCAERWKTM +KEKKR
Sbjct: 298 MPRAKADSRPRGRMTAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKTMLDKEKKR 357
Query: 60 FHEMADKDKKRYDTEMQSYTPPAGEK-----------------------------RGKIK 90
FHEMA+ DKKRYD EM++YTPP GEK R K+K
Sbjct: 358 FHEMAENDKKRYDDEMKNYTPPKGEKQRGKKRKQVKDPNAPKRSLSAFFWFSNDERAKVK 417
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
NPE+GVGDIAKELG++WAD +P +K+KYE +A+KDKARYEKEMTAYK +++
Sbjct: 418 SQNPEFGVGDIAKELGRRWADAEPEMKSKYEALADKDKARYEKEMTAYKKKNM 470
>gi|383858172|ref|XP_003704576.1| PREDICTED: high mobility group protein DSP1-like [Megachile
rotundata]
Length = 433
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 123/169 (72%), Gaps = 30/169 (17%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP+ KD KPRGRMTAYAFFVQ CR+E+KKKHPEE +VF EFSKKCA WKTMS+KEKKRF
Sbjct: 235 MPRGKDSKPRGRMTAYAFFVQTCRQEYKKKHPEEKIVFREFSKKCAMSWKTMSDKEKKRF 294
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------------RGKIK 90
HEMA+KDKKRYD EMQ+YTPP GE RGK+K
Sbjct: 295 HEMAEKDKKRYDAEMQNYTPPKGESKGRGKKRKHIKDLNAPKRSLSAFFWFCSDERGKVK 354
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
NPE+GVGDIAKELGKKW+D DP K+KYE MAEKDKARYE+EMTAYK
Sbjct: 355 MLNPEFGVGDIAKELGKKWSDADPETKSKYEAMAEKDKARYEREMTAYK 403
>gi|195393910|ref|XP_002055595.1| GJ19445 [Drosophila virilis]
gi|194150105|gb|EDW65796.1| GJ19445 [Drosophila virilis]
Length = 403
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 121/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 183 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 242
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+TEMQ+Y PP G ++R K+K NPE
Sbjct: 243 KDKQRYETEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 302
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
YGVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 303 YGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 346
>gi|195448286|ref|XP_002071591.1| GK25058 [Drosophila willistoni]
gi|194167676|gb|EDW82577.1| GK25058 [Drosophila willistoni]
Length = 406
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/164 (64%), Positives = 121/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 184 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 243
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+TEMQ+Y PP G ++R K+K NPE
Sbjct: 244 KDKQRYETEMQNYVPPKGAVVGRGKKRKQMKDPNAPKRSLSAFFWFCNDERNKVKALNPE 303
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
YGVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 304 YGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 347
>gi|170056683|ref|XP_001864141.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876428|gb|EDS39811.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 372
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 120/165 (72%), Gaps = 30/165 (18%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
KD KPRGRMTAYAFFVQ CREEHKKKHPEE V+FAEFS+KCAERWKTM +KEK+RFHEMA
Sbjct: 136 KDNKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMA 195
Query: 65 DKDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNP 94
+KDK RY+ EMQSY PP G E+R K+K NP
Sbjct: 196 EKDKARYELEMQSYVPPKGTVVGKGKKRKAFKDPNAPKRSLSAFFWFCHEERNKVKALNP 255
Query: 95 EYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
EYGVGDIAKELG+KW+D+D VK++YEQMAEKDKARYE EMT YK
Sbjct: 256 EYGVGDIAKELGRKWSDMDAEVKSRYEQMAEKDKARYEAEMTEYK 300
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/165 (64%), Positives = 122/165 (73%), Gaps = 30/165 (18%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
KD KPRGRMTAYAFFVQ CREEHKKKHPEE V+FAEFS+KCAERWKTM +KEK+RFHEMA
Sbjct: 36 KDNKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHEMA 95
Query: 65 DKDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNP 94
+KDK+RY+ EMQ+Y PP G ++R K+K NP
Sbjct: 96 EKDKQRYELEMQNYVPPKGTVVGRGKKRKAFKDPNAPKRSLSAFFWFCHDERNKVKALNP 155
Query: 95 EYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
EYGVGDIAKELG+KW+D+D VK+KYEQMAEKDKARYE+EMT YK
Sbjct: 156 EYGVGDIAKELGRKWSDMDAEVKSKYEQMAEKDKARYEQEMTEYK 200
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F R + K +PE V + +K+ +W M + K ++ +MA+KDK
Sbjct: 132 PKRSLSAFFWFCHDERNKVKALNPEYGV--GDIAKELGRKWSDMDAEVKSKYEQMAEKDK 189
Query: 69 KRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELG 106
RY+ EM Y K+K N + G G LG
Sbjct: 190 ARYEQEMTEY---------KLKCKNEQGGGGGTPLNLG 218
>gi|312378819|gb|EFR25283.1| hypothetical protein AND_09522 [Anopheles darlingi]
Length = 527
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/167 (63%), Positives = 121/167 (72%), Gaps = 30/167 (17%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
K KD KPRGRMTAYAFFVQ CREEHKKKHPEE V+FAEFS+KCAERWKTM +KEK+RFHE
Sbjct: 264 KVKDNKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHE 323
Query: 63 MADKDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQD 92
MA+KDK+RY+ EMQSY PP G ++R K+K
Sbjct: 324 MAEKDKQRYELEMQSYVPPKGAVVGRGKKRKQFKDPNAPKRSLSAFFWFCHDERNKVKAL 383
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
NPEYGVGDIAKELG+KW+D+D +K KYEQMAEKDK RYE+EMT YK
Sbjct: 384 NPEYGVGDIAKELGRKWSDMDAEIKQKYEQMAEKDKQRYEQEMTEYK 430
>gi|198469582|ref|XP_001355062.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
gi|198146939|gb|EAL32118.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
Length = 393
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 175 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 234
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 235 KDKQRYEAEMQNYVPPKGTVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 294
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
YGVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 295 YGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 338
>gi|260166759|gb|ACX32991.1| RE09522p [Drosophila melanogaster]
Length = 411
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/165 (62%), Positives = 120/165 (72%), Gaps = 30/165 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 194 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 253
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 254 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 313
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 314 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKT 358
>gi|347962987|ref|XP_311155.4| AGAP000005-PA [Anopheles gambiae str. PEST]
gi|333467412|gb|EAA06432.5| AGAP000005-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/167 (63%), Positives = 120/167 (71%), Gaps = 30/167 (17%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
K KD KPRGRMTAYAFFVQ CREEHKKKHPEE V+FAEFS+KCAERWKTM +KEK+RFHE
Sbjct: 213 KVKDNKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKTMLDKEKQRFHE 272
Query: 63 MADKDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQD 92
MA+KDK RY+ EMQSY PP G ++R K+K
Sbjct: 273 MAEKDKARYELEMQSYVPPKGAVVGRGKKRKQFKDPNAPKRSLSAFFWFCHDERNKVKAL 332
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
NPEYGVGDIAKELG+KW+D+D +K KYEQMAEKDK RYE+EMT YK
Sbjct: 333 NPEYGVGDIAKELGRKWSDMDAEIKQKYEQMAEKDKQRYEQEMTEYK 379
>gi|195134440|ref|XP_002011645.1| GI10980 [Drosophila mojavensis]
gi|193906768|gb|EDW05635.1| GI10980 [Drosophila mojavensis]
Length = 402
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 180 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 239
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 240 KDKQRYEQEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 299
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
YGVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 300 YGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 343
>gi|221329973|ref|NP_001138203.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
gi|220901792|gb|ACL82935.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
Length = 397
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 180 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 239
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 240 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 299
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 300 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 343
>gi|45551469|ref|NP_727959.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|45447020|gb|AAN09394.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|327180774|gb|AEA30996.1| RE44118p [Drosophila melanogaster]
Length = 386
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 169 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 228
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 229 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 288
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 289 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 332
>gi|24642472|ref|NP_727960.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|24642474|ref|NP_727961.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|24642476|ref|NP_542446.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|16768340|gb|AAL28389.1| GM02110p [Drosophila melanogaster]
gi|22832356|gb|AAN09395.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|22832357|gb|AAN09396.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|22832358|gb|AAF48594.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|220943192|gb|ACL84139.1| Dsp1-PA [synthetic construct]
gi|220953466|gb|ACL89276.1| Dsp1-PA [synthetic construct]
Length = 385
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 168 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 227
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 228 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 287
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 288 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 331
>gi|551090|gb|AAA50238.1| DNA-binding protein [Drosophila melanogaster]
Length = 393
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 176 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 235
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 236 KDKQRYEAEMQNYVPPKGALWDRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 295
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 296 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 339
>gi|45555716|ref|NP_996485.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
gi|17366497|sp|Q24537.1|HMG2_DROME RecName: Full=High mobility group protein DSP1; AltName:
Full=Protein dorsal switch 1
gi|1150375|emb|CAA61938.1| ssrp2 [Drosophila melanogaster]
gi|45447019|gb|AAS65386.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
Length = 393
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 176 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 235
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 236 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 295
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 296 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 339
>gi|195479189|ref|XP_002100798.1| GE17263 [Drosophila yakuba]
gi|194188322|gb|EDX01906.1| GE17263 [Drosophila yakuba]
Length = 394
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 177 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 236
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 237 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 296
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 297 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 340
>gi|194893856|ref|XP_001977954.1| GG17955 [Drosophila erecta]
gi|195567092|ref|XP_002107106.1| GD17278 [Drosophila simulans]
gi|190649603|gb|EDV46881.1| GG17955 [Drosophila erecta]
gi|194204505|gb|EDX18081.1| GD17278 [Drosophila simulans]
Length = 393
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 176 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 235
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 236 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 295
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 296 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 339
>gi|194770156|ref|XP_001967163.1| GF19115 [Drosophila ananassae]
gi|190619283|gb|EDV34807.1| GF19115 [Drosophila ananassae]
Length = 387
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 170 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 229
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 230 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 289
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 290 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 333
>gi|587104|emb|CAA57212.1| unnamed protein product [Drosophila melanogaster]
Length = 328
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 111 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 170
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 171 KDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 230
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 231 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 274
>gi|195040353|ref|XP_001991052.1| GH12282 [Drosophila grimshawi]
gi|193900810|gb|EDV99676.1| GH12282 [Drosophila grimshawi]
Length = 402
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 120/164 (73%), Gaps = 30/164 (18%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KPRGRMTAYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWKTM +KEKKRFHEMA+
Sbjct: 182 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAE 241
Query: 66 KDKKRYDTEMQSYTPPAG------------------------------EKRGKIKQDNPE 95
KDK+RY+ EMQ+Y PP G ++R K+K NPE
Sbjct: 242 KDKQRYEQEMQNYVPPKGTVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPE 301
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 302 FGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK 345
>gi|328790284|ref|XP_001121384.2| PREDICTED: high mobility group protein DSP1, partial [Apis
mellifera]
Length = 379
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 113/158 (71%), Gaps = 30/158 (18%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP+ KD KPRGRMTAYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWKTMS+KEKKRF
Sbjct: 222 MPRGKDSKPRGRMTAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKTMSDKEKKRF 281
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------------RGKIK 90
HEMA+KDKKRYD EMQ+YTPP GE RGK+K
Sbjct: 282 HEMAEKDKKRYDAEMQNYTPPKGESKGRGKKRKHIKDHNAPKRSLSAFFWFCNDERGKVK 341
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDK 128
NPE+GVGDIAKELGKKW+D DP K+KYE MAEKDK
Sbjct: 342 MLNPEFGVGDIAKELGKKWSDADPETKSKYEAMAEKDK 379
>gi|242003301|ref|XP_002422686.1| High mobility group protein B2, putative [Pediculus humanus
corporis]
gi|212505508|gb|EEB09948.1| High mobility group protein B2, putative [Pediculus humanus
corporis]
Length = 187
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/162 (63%), Positives = 118/162 (72%), Gaps = 29/162 (17%)
Query: 1 MPKEK-DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
MP+ K D KPRGRMTAYAFFVQ CREEHKKKHP+ENVVFAEFSKKCAERWKTM +KEK+R
Sbjct: 1 MPRGKNDNKPRGRMTAYAFFVQTCREEHKKKHPDENVVFAEFSKKCAERWKTMLDKEKRR 60
Query: 60 FHEMADKDKKRYDTEMQSYTPPAGEKRG----------------------------KIKQ 91
FHEMA+KDK RYD+EMQ+Y P EKRG K+K
Sbjct: 61 FHEMAEKDKLRYDSEMQNYVPSKAEKRGKKRKHIKDPNAPKRSLSAFFWFCNDERPKVKA 120
Query: 92 DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
NPEYGVGD+AKELG++WA+ DP K+KYE MAEKDKARY++
Sbjct: 121 INPEYGVGDVAKELGRRWAEADPDTKSKYEAMAEKDKARYDR 162
>gi|270005614|gb|EFA02062.1| hypothetical protein TcasGA2_TC007692 [Tribolium castaneum]
Length = 557
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 129/225 (57%), Gaps = 82/225 (36%)
Query: 1 MPKEK-DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK--------- 50
MP+ K D +PRGRMTAYAFFVQ CREEHKKKHPEENVVFAEFSKKCAERWK
Sbjct: 298 MPRAKADSRPRGRMTAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKPPEESYITI 357
Query: 51 -------------------------------------------TMSEKEKKRFHEMADKD 67
TM +KEKKRFHEMA+ D
Sbjct: 358 SFLGEGKQVSGPHLHQRRVVAGLLAPSISNLFKCDGRIRQTESTMLDKEKKRFHEMAEND 417
Query: 68 KKRYDTEMQSYTPPAGEK-----------------------------RGKIKQDNPEYGV 98
KKRYD EM++YTPP GEK R K+K NPE+GV
Sbjct: 418 KKRYDDEMKNYTPPKGEKQRGKKRKQVKDPNAPKRSLSAFFWFSNDERAKVKSQNPEFGV 477
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
GDIAKELG++WAD +P +K+KYE +A+KDKARYEKEMTAYK +++
Sbjct: 478 GDIAKELGRRWADAEPEMKSKYEALADKDKARYEKEMTAYKKKNM 522
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/163 (60%), Positives = 115/163 (70%), Gaps = 27/163 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWKTMSE EKKRFH+MADKD
Sbjct: 6 KPRGRMSAYAFFVQTCREEHKKKHPSENVVFAEFSKKCAERWKTMSEGEKKRFHQMADKD 65
Query: 68 KKRYDTEMQSYTPPAGEK---------------------------RGKIKQDNPEYGVGD 100
KKR+D+EM Y PP GEK R ++Q++P+ VG+
Sbjct: 66 KKRFDSEMADYKPPKGEKSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGE 125
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
+AKELG++W DV K+KYE +A KDKARYEKE+ AYKN+
Sbjct: 126 VAKELGRRWNDVGDDTKSKYEGLAAKDKARYEKELKAYKNKKT 168
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/163 (59%), Positives = 115/163 (70%), Gaps = 27/163 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWKTMS+ EKKRFH+MADKD
Sbjct: 6 KPRGRMSAYAFFVQTCREEHKKKHPTENVVFAEFSKKCAERWKTMSDGEKKRFHQMADKD 65
Query: 68 KKRYDTEMQSYTPPAGEK---------------------------RGKIKQDNPEYGVGD 100
KKR+D+EM Y PP GEK R ++Q++P+ VG+
Sbjct: 66 KKRFDSEMADYKPPKGEKSKKRKRTKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGE 125
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
+AKELG++W DV K+KYE +A KDKARYEKE+ AYKN+
Sbjct: 126 VAKELGRRWNDVGDDTKSKYEGLAAKDKARYEKELKAYKNKKT 168
>gi|29825377|gb|AAO92280.1| putative HMG-like protein [Dermacentor variabilis]
Length = 208
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 115/161 (71%), Gaps = 27/161 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWKTMSE EKKRFH+MADKD
Sbjct: 6 KPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSESEKKRFHQMADKD 65
Query: 68 KKRYDTEMQSYTPPAGEK---------------------------RGKIKQDNPEYGVGD 100
KKR+DTEM Y PP G+K R ++Q++P+ VG+
Sbjct: 66 KKRFDTEMADYKPPKGDKSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQESPDASVGE 125
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+AKELG++W +V VK+KYE +A KDKARYEKE+ AYK +
Sbjct: 126 VAKELGRRWNEVGDDVKSKYEGLAAKDKARYEKELKAYKGK 166
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 114/161 (70%), Gaps = 27/161 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWKTMS+ EKKRFH+MADKD
Sbjct: 6 KPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSDGEKKRFHQMADKD 65
Query: 68 KKRYDTEMQSYTPPAGEK---------------------------RGKIKQDNPEYGVGD 100
KKR+DTEM Y PP G+K R ++Q+NP+ VG+
Sbjct: 66 KKRFDTEMADYKPPKGDKSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPDSSVGE 125
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+AKELG++W +V VK KYE +A KDKARYEKE+ AYK +
Sbjct: 126 VAKELGRRWNEVGDDVKAKYEGLAAKDKARYEKELKAYKGK 166
>gi|321478856|gb|EFX89813.1| hypothetical protein DAPPUDRAFT_232871 [Daphnia pulex]
Length = 190
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/161 (60%), Positives = 113/161 (70%), Gaps = 29/161 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRMTAYAFFVQ CREEHKKKHP+ENVVF+EFSKKCAERWKTMS+KEKKRF EMA++D
Sbjct: 10 KPRGRMTAYAFFVQTCREEHKKKHPDENVVFSEFSKKCAERWKTMSDKEKKRFQEMAERD 69
Query: 68 KKRYDTEMQSYTPP-----------------------------AGEKRGKIKQDNPEYGV 98
K R+D EM+ Y P ++RG +K +PEY V
Sbjct: 70 KVRFDDEMRHYEPADKGAGRGRKRKQVKDPNAPKRSLSAFFWFCNDERGNVKAAHPEYTV 129
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
GDIAK+LGK+W +VD S K+KYE MAEKDKARYE+E AYK
Sbjct: 130 GDIAKDLGKQWGEVDESTKSKYEAMAEKDKARYERENNAYK 170
>gi|312190937|gb|ADQ43367.1| HMGBb [Litopenaeus vannamei]
Length = 206
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 113/169 (66%), Gaps = 30/169 (17%)
Query: 1 MPKEK--DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKK 58
MP+ K D KPRGRM+AYAFFVQ CREEHKKKHP+ENVVF+EFS+KCAERWKTM++KEK
Sbjct: 1 MPRAKLVDSKPRGRMSAYAFFVQTCREEHKKKHPDENVVFSEFSRKCAERWKTMTDKEKD 60
Query: 59 RFHEMADKDKKRYDTEMQSYTPP----------------------------AGEKRGKIK 90
RF++MADKDK RYDTEM+ Y P ++R K++
Sbjct: 61 RFYDMADKDKARYDTEMKGYRGPRTPRVSRKRRNRKDPNAPKRALSAFFWFCNDERAKVR 120
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
NP+ GVGD+AK+LG W++ P K KYE +A DK RYEKEM A+K
Sbjct: 121 AANPDMGVGDVAKQLGAAWSNTPPEAKAKYEALAASDKERYEKEMKAFK 169
>gi|391344136|ref|XP_003746359.1| PREDICTED: high mobility group protein DSP1-like isoform 3
[Metaseiulus occidentalis]
Length = 202
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 108/169 (63%), Gaps = 27/169 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYA+FVQ CREEHKKKHP ENVVFAEFSKKCAERWKTM+E EK+RFH MA KD
Sbjct: 21 KPRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHLMAAKD 80
Query: 68 KKRYDTEMQSYTPPAG---------------------------EKRGKIKQDNPEYGVGD 100
KKRY+ EM +Y P G ++R K+K E V +
Sbjct: 81 KKRYENEMSTYVPKEGPRGKAARKKKDPNAPKRALSAFFHFCQDERPKVKATLGESTVAE 140
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEE 149
+AKELG+KW D K KYEQ+A KDK RYE+EMTAYK V P E
Sbjct: 141 VAKELGRKWQDCTDEQKGKYEQLAAKDKQRYEREMTAYKKGGVVPAAPE 189
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQ 122
MA DK R +Y + K K N + +K+ ++W ++ K ++
Sbjct: 16 MAKGDKPRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHL 75
Query: 123 MAEKDKARYEKEMTAY 138
MA KDK RYE EM+ Y
Sbjct: 76 MAAKDKKRYENEMSTY 91
>gi|391344132|ref|XP_003746357.1| PREDICTED: high mobility group protein DSP1-like isoform 1
[Metaseiulus occidentalis]
gi|391344134|ref|XP_003746358.1| PREDICTED: high mobility group protein DSP1-like isoform 2
[Metaseiulus occidentalis]
Length = 187
Score = 174 bits (442), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 107/169 (63%), Gaps = 27/169 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYA+FVQ CREEHKKKHP ENVVFAEFSKKCAERWKTM+E EK+RFH MA KD
Sbjct: 6 KPRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHLMAAKD 65
Query: 68 KKRYDTEMQSYTPPAGEK---------------------------RGKIKQDNPEYGVGD 100
KKRY+ EM +Y P G + R K+K E V +
Sbjct: 66 KKRYENEMSTYVPKEGPRGKAARKKKDPNAPKRALSAFFHFCQDERPKVKATLGESTVAE 125
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEE 149
+AKELG+KW D K KYEQ+A KDK RYE+EMTAYK V P E
Sbjct: 126 VAKELGRKWQDCTDEQKGKYEQLAAKDKQRYEREMTAYKKGGVVPAAPE 174
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQ 122
MA DK R +Y + K K N + +K+ ++W ++ K ++
Sbjct: 1 MAKGDKPRGRMSAYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMNEPEKQRFHL 60
Query: 123 MAEKDKARYEKEMTAY 138
MA KDK RYE EM+ Y
Sbjct: 61 MAAKDKKRYENEMSTY 76
>gi|312190935|gb|ADQ43366.1| HMGBa [Litopenaeus vannamei]
Length = 222
Score = 171 bits (434), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 114/169 (67%), Gaps = 31/169 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRMTAYAFFVQ CR EHKK HP+ENV FAEFS++C+ERWKTMS+KEKK+FH+MA+ D
Sbjct: 13 KPRGRMTAYAFFVQTCRTEHKKLHPDENVQFAEFSRQCSERWKTMSDKEKKKFHDMAEDD 72
Query: 68 KKRYDTEMQSYTPP-------------------------------AGEKRGKIKQDNPEY 96
KKRYD EM+ + P A ++R K++ NP++
Sbjct: 73 KKRYDEEMKDFVPSPGAGRRGRRARGRRPKDPNKPKRALSAFFYYANDERPKVRAANPDF 132
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
VG++AKELG++W ++ K KYE++AE+D+ARY++EMTAYK +P
Sbjct: 133 SVGEVAKELGRQWNELGEDEKVKYEKLAEEDRARYDREMTAYKFGGASP 181
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 27/158 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+GRM+AYAFFVQ CR+EHKK+HP E+VVFAEFSKKCAERWK M++KEKK FH+MADKD
Sbjct: 35 KPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFHDMADKD 94
Query: 68 KKRYDTEMQSYTPP---------------------------AGEKRGKIKQDNPEYGVGD 100
K+RY+TEM+ YTPP KR ++K+ +P +GVGD
Sbjct: 95 KERYNTEMEKYTPPKGEKKGKKRKRKDPDAPKRNLSPFFLFCNVKRAEVKKVHPNWGVGD 154
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+AK LG++W +V + K KYE+ A K+K RYEK+M AY
Sbjct: 155 VAKALGEQWKNVSAADKAKYEKEAAKEKIRYEKDMEAY 192
>gi|296317265|ref|NP_001171733.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 215
Score = 169 bits (427), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 27/158 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+GRM+AYAFFVQ CR+EHKK+HP E+VVFAEFSKKCAERWK M++KEKK FH+MADKD
Sbjct: 9 KPKGRMSAYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWKKMTDKEKKVFHDMADKD 68
Query: 68 KKRYDTEMQSYTPP---------------------------AGEKRGKIKQDNPEYGVGD 100
K+RY+TEM+ YTPP KR ++K+ +P +GVGD
Sbjct: 69 KERYNTEMEKYTPPKGEKKGKKRKRKDPDAPKRNLSPFFLFCNVKRAEVKKVHPNWGVGD 128
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+AK LG++W +V + K KYE+ A K+K RYEK+M AY
Sbjct: 129 VAKALGEQWKNVSAADKAKYEKEAAKEKIRYEKDMEAY 166
>gi|391345046|ref|XP_003746804.1| PREDICTED: high mobility group protein DSP1-like [Metaseiulus
occidentalis]
Length = 186
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 114/177 (64%), Gaps = 28/177 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGR +AYA+FVQ CREE+KK HP ENVVFAEFSKKCAERWKTM+E EK+RF MA KD
Sbjct: 6 KPRGRTSAYAYFVQTCREEYKKMHPNENVVFAEFSKKCAERWKTMNEPEKQRFQLMAAKD 65
Query: 68 KKRYDTEMQSYTP---PAG------------------------EKRGKIKQDNPEYGVGD 100
KKRY+ EM +Y P P G ++R K++ + + VG+
Sbjct: 66 KKRYEDEMSTYVPKEAPRGKAARKEKDPNAPKRALSAFFHFCQDERPKVRAELGQSTVGE 125
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA-PVNEEADEEDDE 156
+AK+LGKKW + K+KYEQ+A KDK RYE EM AYKN VA P + DE +DE
Sbjct: 126 VAKQLGKKWQECTGEQKSKYEQLAAKDKQRYELEMAAYKNGGVAPPAPPKRDENNDE 182
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQ 122
MA DK R T +Y + K N + +K+ ++W ++ K +++
Sbjct: 1 MAKGDKPRGRTSAYAYFVQTCREEYKKMHPNENVVFAEFSKKCAERWKTMNEPEKQRFQL 60
Query: 123 MAEKDKARYEKEMTAYKNRSVAPVNEEADEEDD 155
MA KDK RYE EM+ Y + AP + A +E D
Sbjct: 61 MAAKDKKRYEDEMSTYVPKE-APRGKAARKEKD 92
>gi|325303836|tpg|DAA34592.1| TPA_exp: putative HMG-like protein [Amblyomma variegatum]
Length = 145
Score = 162 bits (411), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 97/140 (69%), Gaps = 27/140 (19%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWKTMSE EKKRFH+MADKD
Sbjct: 6 KPRGRMSAYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKTMSEGEKKRFHQMADKD 65
Query: 68 KKRYDTEMQSYTPPAGEK---------------------------RGKIKQDNPEYGVGD 100
KKR+D+EM Y PP G+K R ++Q+NP+ VG+
Sbjct: 66 KKRFDSEMADYKPPKGDKSKKRKRAKDPNAPKRPLSAFFWFCNDERPNVRQENPDASVGE 125
Query: 101 IAKELGKKWADVDPSVKTKY 120
+AKELG++W + V++KY
Sbjct: 126 VAKELGRRWNEGGDDVQSKY 145
>gi|443726517|gb|ELU13637.1| hypothetical protein CAPTEDRAFT_158220 [Capitella teleta]
Length = 198
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 106/165 (64%), Gaps = 27/165 (16%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
KD KPRG+M++YAFFVQ CREEHKKKHP E+VVFAEFSKKCAERWKTMS KEKKRF EMA
Sbjct: 4 KDGKPRGKMSSYAFFVQTCREEHKKKHPGESVVFAEFSKKCAERWKTMSAKEKKRFEEMA 63
Query: 65 DKDKKRYDTEMQSYTPPAG-------------------------EKRGKIKQDNPEYGVG 99
+KDK RY+ +M YTP G +R +K+ P VG
Sbjct: 64 EKDKARYEKDMAGYTPAKGAVKRKRTKDPNAPKRALSAFFFFCHHERPSVKKTMPNSSVG 123
Query: 100 DIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
++AKELGK+W V + +T++E MA DK RYEK+M YK V
Sbjct: 124 EVAKELGKRWEGV--TDRTRFEVMARDDKKRYEKDMAIYKKGGVV 166
>gi|321476548|gb|EFX87508.1| hypothetical protein DAPPUDRAFT_306496 [Daphnia pulex]
Length = 191
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 111/176 (63%), Gaps = 31/176 (17%)
Query: 1 MPKEK--DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKK 58
MP+ K KPRGRMTAYA+F+Q CREEHK K+P+ENVVF EFS++CA +WK M+E +KK
Sbjct: 1 MPRAKGDSNKPRGRMTAYAYFMQTCREEHKNKYPDENVVFLEFSRRCAGQWKLMTENDKK 60
Query: 59 RFHEMADKDKKRYDTEMQSYTPPAG-----------------------------EKRGKI 89
RF MA++DK R++ EM+ Y PP G + RG +
Sbjct: 61 RFQGMAERDKLRFENEMRHYQPPQGATGRGTKRKQVKDPNAPKRSLSAFFWFCHDLRGHV 120
Query: 90 KQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
K+ +PEY +G+IAKELG++W D + K +Y AE+D+ARYE++M AYK + P
Sbjct: 121 KEQHPEYTLGEIAKELGRRWGVSDDATKAQYAAKAEQDRARYERDMNAYKKSKLEP 176
>gi|118343822|ref|NP_001071733.1| transcription factor protein [Ciona intestinalis]
gi|70569841|dbj|BAE06487.1| transcription factor protein [Ciona intestinalis]
Length = 204
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 110/171 (64%), Gaps = 27/171 (15%)
Query: 1 MPKEKDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
MP +KD KPRGRMT YA+FVQ CREEHK+KHP E VVFAEFS+KCA+RWK M++KEKK
Sbjct: 1 MPTKKDPNKPRGRMTGYAYFVQTCREEHKRKHPNEQVVFAEFSRKCAKRWKPMTDKEKKT 60
Query: 60 FHEMADKDKKRYDTEMQSYTPPAGE--------------------------KRGKIKQDN 93
F +MA+KD++RY+ EM+ Y P AGE +R +K +N
Sbjct: 61 FTDMAEKDRQRYEREMKDYVPAAGEAKKKKKKKDPNAPKRPQSAFFLFCADRRAPLKAEN 120
Query: 94 PEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
P + VG+IAK LGKKWA P K KY + E +K++Y KEM Y+++ A
Sbjct: 121 PGWTVGEIAKALGKKWAAASPDTKKKYAEQGEVEKSKYNKEMEKYRSQQEA 171
>gi|405975742|gb|EKC40290.1| High mobility group protein DSP1 [Crassostrea gigas]
Length = 201
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 109/169 (64%), Gaps = 30/169 (17%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
KD KPRGRM++YAFFVQ CREEHKKK P+ENVVFAEF+KKCA++WK MS KEK+RF EMA
Sbjct: 4 KDGKPRGRMSSYAFFVQTCREEHKKKCPDENVVFAEFTKKCAQKWKEMSAKEKRRFEEMA 63
Query: 65 DKDKKRYDTEMQSYTPPAGEKRGK----------------------------IKQDNPEY 96
++DK RY+ +M +Y PPAG GK ++ +PE+
Sbjct: 64 ERDKSRYEKDMANYDPPAGGATGKRKKRAKDPNAPKRALSAFFFFCGDERPDVRAAHPEW 123
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
V ++AKELGK+W V + ++K+E AE DKARY KEM AY+ P
Sbjct: 124 SVAEVAKELGKRWEKV--TNRSKFEARAEADKARYAKEMEAYRGGGSVP 170
>gi|338815383|gb|AEJ08754.1| HMGB-like protein [Crassostrea ariakensis]
Length = 202
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 108/169 (63%), Gaps = 30/169 (17%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
KD KPRG M++YAFFVQ CREEHKKK P+ENVVFAEF+KKCA++WK MS KEK+RF EMA
Sbjct: 4 KDGKPRGCMSSYAFFVQTCREEHKKKCPDENVVFAEFTKKCAQKWKEMSAKEKRRFEEMA 63
Query: 65 DKDKKRYDTEMQSYTPPAGEKRGK----------------------------IKQDNPEY 96
++DK RY+ EM +Y PPAG GK ++ +PE+
Sbjct: 64 ERDKSRYEKEMANYDPPAGGAGGKRKKRAKDPSAPKRALSAFFFFCADERPDVRAAHPEW 123
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
V ++AKELGK+W V + ++K+E AE DKARY KEM AY+ P
Sbjct: 124 SVAEVAKELGKRWEKV--TNRSKFEARAEADKARYAKEMEAYRGGGSVP 170
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 108/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A K K +YEK++TAY+N+ PV+
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKASKLKEKYEKDITAYRNKGKVPVS 170
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|335892930|gb|AEH59760.1| high mobility group box 2 [Lethenteron camtschaticum]
Length = 194
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 110/172 (63%), Gaps = 22/172 (12%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K + KPRG+M++YA+FVQ CREEHKKKHPE +V FAEFSKKC+ERWKTMS KEK RF
Sbjct: 1 MGKGEPGKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSPKEKARF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAG----------------------EKRGKIKQDNPEYGV 98
EMA DK RYD EM++Y PP G E R K+K D+P G+
Sbjct: 61 EEMAKADKARYDREMKNYVPPKGKRKTKDPNAPKRPPSAFFVFCSEHRPKVKADHPGLGI 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
G+IAK LG+ W + P K+ YE+ A K K +YEK++ AY+ + A ++ A
Sbjct: 121 GEIAKRLGEMWGLLTPETKSPYEKKAAKLKEKYEKDVAAYRGKGKAAPSKAA 172
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 108/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW+TMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KMRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A + K +YEK++TAY+N+ PV+
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKAARLKEKYEKDITAYRNKGKVPVS 170
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKMRYEREMRSY 77
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 155 bits (392), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 107/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CR EHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCRIEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A K K +YEK++TAY+N+ PV+
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKASKLKEKYEKDITAYRNKGKVPVS 170
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ ++YAFFVQ CREEHKKK+P +V F+EFSKKC+ERW+TMS KEK +F EMA D
Sbjct: 7 KPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEMAKTD 66
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RYD EM++Y PP + R K+K DNP +GDIA
Sbjct: 67 KVRYDREMKNYVPPKGAKGGKKKKDPNAPKRPPSAFFVFCSDHRPKVKGDNPGISIGDIA 126
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
K+LG+ W+ + P K+ YEQ A K K +YEK++ AY+ + V P
Sbjct: 127 KKLGEMWSKLSPKEKSPYEQKAMKLKEKYEKDVAAYRAKGVKP 169
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 108/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 149 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLAKLD 208
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 209 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 268
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A K K +YEK++TAY+N+ PV+
Sbjct: 269 KLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYRNKGKVPVS 312
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 145 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 204
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 205 AKLDKVRYEREMRSY 219
>gi|213514690|ref|NP_001133170.1| high-mobility group box 2 [Salmo salar]
gi|197632301|gb|ACH70874.1| high-mobility group box 2 [Salmo salar]
gi|221219834|gb|ACM08578.1| High mobility group protein B2 [Salmo salar]
gi|221220870|gb|ACM09096.1| High mobility group protein B2 [Salmo salar]
gi|223646276|gb|ACN09896.1| High mobility group protein B2 [Salmo salar]
gi|223646962|gb|ACN10239.1| High mobility group protein B2 [Salmo salar]
gi|223672123|gb|ACN12243.1| High mobility group protein B2 [Salmo salar]
gi|223672825|gb|ACN12594.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 101/170 (59%), Gaps = 26/170 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP + KP+G+ ++YAFFV CREEHKKKHP +V F+EFSKKC+ERW+TMS KEK +F
Sbjct: 1 MPGKDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK--------------------------RGKIKQDNP 94
+MA DK RYD +M+ Y PP G K RG+IK DNP
Sbjct: 61 EDMAKGDKVRYDKDMKGYVPPKGSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNP 120
Query: 95 EYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
G+GDIAK+LG W P K +E A K K +YEK++ AYK + A
Sbjct: 121 GMGIGDIAKQLGLLWGKQTPKDKLPHEAKAAKLKEKYEKDVAAYKAKGGA 170
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T; AltName:
Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 107/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ REEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A + K +YEK++TAY+N+ PV+
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKASRLKEKYEKDITAYRNKGKVPVS 170
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY +R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|225709792|gb|ACO10742.1| High mobility group protein B2 [Caligus rogercresseyi]
Length = 215
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 101/170 (59%), Gaps = 26/170 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP + KP+G+ ++YAFFV CREEHKKKHP +V F+EFSKKC+ERW+TMS KEK +F
Sbjct: 1 MPGKDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK--------------------------RGKIKQDNP 94
+MA DK RYD +M+ Y PP G K RG+IK DNP
Sbjct: 61 EDMAKGDKVRYDKDMKGYVPPKGSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNP 120
Query: 95 EYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
G+GDIAK+LG W P K +E A K K +YEK++ AYK + A
Sbjct: 121 GMGIGDIAKQLGLLWGKQTPKDKLPHEAKATKLKEKYEKDVAAYKAKGGA 170
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFS+KC+ERWKTMS KEK +F EMA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP E R KIK D+P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W++ K YEQ A K K +YEK++ AY+ +S
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKS 166
>gi|609553|gb|AAA74556.1| HMG-T2 [Oncorhynchus mykiss]
Length = 215
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 101/170 (59%), Gaps = 26/170 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP + KP+G+ ++YAFFV CREEHKKKHP +V F+EFSKKC+ERW+TMS KEK +F
Sbjct: 1 MPGKDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK--------------------------RGKIKQDNP 94
+MA DK RYD +M+ Y PP G K RG+IK DNP
Sbjct: 61 EDMAKGDKVRYDKDMKGYVPPKGSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNP 120
Query: 95 EYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
G+GDIAK+LG W P K +E A K K +YEK++ AYK + A
Sbjct: 121 GMGIGDIAKQLGLLWGKQTPKDKQPHEAKAAKLKEKYEKDVAAYKAKGGA 170
>gi|221221606|gb|ACM09464.1| High mobility group protein B2 [Salmo salar]
gi|223646184|gb|ACN09850.1| High mobility group protein B2 [Salmo salar]
gi|223646756|gb|ACN10136.1| High mobility group protein B2 [Salmo salar]
gi|223672031|gb|ACN12197.1| High mobility group protein B2 [Salmo salar]
gi|223672611|gb|ACN12487.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 151 bits (381), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 101/170 (59%), Gaps = 26/170 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP + KP+G+ ++YAFFV CREEHKKKHP +V F+EFSKKC+ERW+TMS KEK +F
Sbjct: 1 MPGKDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK--------------------------RGKIKQDNP 94
+MA DK RYD +M+ Y PP G K RG+IK DNP
Sbjct: 61 EDMAKGDKVRYDKDMKGYVPPKGSKAAGKRKKDPNAPKRPPSAFFVFCAEHRGRIKADNP 120
Query: 95 EYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
G+GDIAK+LG W P K +E A K K +YEK++ AYK + A
Sbjct: 121 GMGIGDIAKQLGLLWGKQTPKDKQPHEAKAAKLKEKYEKDVAAYKAKGGA 170
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 214
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 100/167 (59%), Gaps = 26/167 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+G+M++YAFFV CR+EHKKKHP V F+EFSKKC+ERWK MS KEK +F E+A D
Sbjct: 6 RPKGKMSSYAFFVTTCRDEHKKKHPGTPVNFSEFSKKCSERWKNMSSKEKSKFEELAKTD 65
Query: 68 KKRYDTEMQSYTPPAGEK--------------------------RGKIKQDNPEYGVGDI 101
K RYD EMQSY PP G K R KIK+DNP +GDI
Sbjct: 66 KIRYDQEMQSYVPPKGSKVSRKKKKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDI 125
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNE 148
AK+LG+ W+ P K YE A K K +YEK++ AYK + N+
Sbjct: 126 AKKLGELWSTQGPKDKAPYEARAAKLKEKYEKDVAAYKAKGGVSKND 172
>gi|223646906|gb|ACN10211.1| High mobility group-T protein [Salmo salar]
gi|223672769|gb|ACN12566.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 108/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A K K +YEK++TAY+N+ PV+
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYRNKGKVPVS 170
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|221220042|gb|ACM08682.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 108/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKVETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A K K +YEK++TAY+N+ PV+
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYRNKGKVPVS 170
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 109/167 (65%), Gaps = 24/167 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW+TMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
+LG+KW ++ K YE+ A K K +YEK++TAY+N+ PV+ A
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYRNKGKVPVSVPA 173
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|45382755|ref|NP_990817.1| high mobility group protein B2 [Gallus gallus]
gi|123373|sp|P26584.2|HMGB2_CHICK RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|211927|gb|AAA48818.1| non-histone chromosomal protein [Gallus gallus]
Length = 207
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFS+KC+ERWKTMS KEK +F EMA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP E R KIK D+P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W++ K YEQ A K K +YEK++ AY+ +S
Sbjct: 128 KLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYRAKS 166
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 103/165 (62%), Gaps = 25/165 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F EMA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEEMAKND 67
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RY+ EM++Y PP E R +IK ++P +GD A
Sbjct: 68 KVRYEREMKTYIPPKGEKKGKKKKDPNAPKRPPSAFFLFCSEHRPQIKSESPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
K+LG+ W++ P K YEQ A K K +YEK++ AYK + + V
Sbjct: 128 KKLGEMWSEQTPKDKLPYEQKAAKLKEKYEKDVAAYKAKGKSDVG 172
>gi|221221148|gb|ACM09235.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 108/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW+TMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A K K +YEK++TAY+N+ PV+
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYRNKGKVPVS 170
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|221221758|gb|ACM09540.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 108/164 (65%), Gaps = 24/164 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW+TMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKVETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
+LG+KW ++ K YE+ A K K +YEK++TAY+N+ PV+
Sbjct: 127 KLGEKWNNLTAEDKVPYEKKAAKLKEKYEKDITAYRNKGKVPVS 170
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 99/157 (63%), Gaps = 25/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RYD EM++Y PP E R KIK ++P +GD A
Sbjct: 68 KARYDREMKNYVPPKGGDKRGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
K+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 164
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 103/169 (60%), Gaps = 25/169 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP + KPRG+ ++YAFFVQ CREEHKKKHP +V F+EFSKKC+ERWKTMS KEK +F
Sbjct: 1 MPGKDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEKRGK-------------------------IKQDNPE 95
++A DK R+D EM+ Y PP G K GK IK ++P
Sbjct: 61 EDLAKGDKVRFDREMKGYVPPKGTKVGKRKKDPNAPKRPPSAFFVFCSDHRARIKGEHPG 120
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+GDIAK+LG+ W+ P K YE A K K +YEK++ AY+ +S A
Sbjct: 121 ISIGDIAKKLGELWSKQTPKDKVPYEAKAGKLKEKYEKDVAAYRAKSGA 169
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGR+T+YA FVQ CREEHKKKHPE+ V F EFSKKC+ERWKTMS KEK +F E++ +D
Sbjct: 23 KPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEELSKED 82
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
KKRY++EM+ Y PP + R KI+++ P +GDIA
Sbjct: 83 KKRYESEMKDYVPPKGAKKQKKKKDPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIA 142
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+KW + K YEQ A+K K +Y+K++ AY+ ++
Sbjct: 143 KKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYRAKT 182
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGR+T+YA FVQ CREEHKKKHPE+ V F EFSKKC+ERWKTMS KEK +F E++ +D
Sbjct: 23 KPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEELSKED 82
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
KKRY++EM+ Y PP + R KI+++ P +GDIA
Sbjct: 83 KKRYESEMKDYVPPKGAKKQKKKKDPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIA 142
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+KW + K YEQ A+K K +Y+K++ AY+ ++
Sbjct: 143 KKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYRAKT 182
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 103/160 (64%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGR+T+YA FVQ CREEHKKKHPE+ V F EFSKKC+ERWKTMS KEK +F E++ +D
Sbjct: 23 KPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEELSKED 82
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
KKRY++EM+ Y PP + R KI+++ P +GDIA
Sbjct: 83 KKRYESEMKDYVPPKGAKKQKKKKDPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIA 142
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+KW + K YEQ A+K K +Y+K++ AY+ ++
Sbjct: 143 KKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYRAKT 182
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 99/157 (63%), Gaps = 24/157 (15%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+M++YA+FVQ CREEHKKKHP+ +V FAEFS+KC+ERWKTMS KEK +F EMA DK
Sbjct: 48 RGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKA 107
Query: 70 RYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAKEL 105
RYD EM++Y PP E R KIK D+P +GD AK+L
Sbjct: 108 RYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKL 167
Query: 106 GKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
G+ W++ K YEQ A K K +YEK++ AY+ +S
Sbjct: 168 GEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKS 204
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 104/165 (63%), Gaps = 25/165 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+MS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKSMSAKEKGKFEDLAKGD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGK-------------------------IKQDNPEYGVGDIA 102
K RY+ EM++Y PP GE +GK IK + P +GD A
Sbjct: 68 KARYEREMKTYIPPKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
K+LG+ WA+ P K +EQ A K K +YEK++ AY+ + + V
Sbjct: 128 KKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYRAKGKSDVG 172
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 102/169 (60%), Gaps = 25/169 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP + KPRG+ ++YAFFVQ CREEHKKKHP +V F+EFSKKC+ERWKTMS KEK +F
Sbjct: 1 MPGKDPNKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKTMSAKEKVKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPE 95
++A DK RYD EM+ Y PP + R +IK +NP
Sbjct: 61 EDLAKGDKVRYDREMKGYVPPKGTKGGKRKKDPNAPKRPPSAFFVFCSDHRARIKGENPG 120
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+GDIAK+LG+ W+ P K YE A K K +YEK++ AY+ +S A
Sbjct: 121 ISIGDIAKKLGELWSKQTPKDKQPYEAKAGKLKEKYEKDVAAYRAKSGA 169
>gi|992639|gb|AAB08831.1| high mobility group protein-2 (HMG-2) [Ambystoma mexicanum]
Length = 216
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 105/169 (62%), Gaps = 26/169 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTM+ KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMNAKEKGKFEDMAKGD 67
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RYD EM+SY PP E R KIK D P +GD A
Sbjct: 68 KVRYDREMKSYVPPKGETKGKKKKDPNAPKRLPSAFFLFCSEHRLKIKADCPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKT-KYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
K+LG+KW++ P K +EQ A K K +YEK++ AY+ + V ++A
Sbjct: 128 KKLGEKWSEQTPKDKIPSFEQKAAKLKEKYEKDIAAYRAKGKVDVGKKA 176
>gi|355778495|gb|EHH63531.1| hypothetical protein EGM_16518 [Macaca fascicularis]
Length = 210
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHPE +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|148922135|gb|AAI46745.1| Zgc:165618 protein [Danio rerio]
Length = 165
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 98/137 (71%), Gaps = 8/137 (5%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKD 127
K RY+ EM++Y PP GE NP +GDIAK+LG+ W VK YE+ A K
Sbjct: 67 KVRYEREMKNYIPPKGE--------NPGLSIGDIAKKLGEMWNSSSAEVKQPYEKKAAKL 118
Query: 128 KARYEKEMTAYKNRSVA 144
K +Y+K++ Y+ + +A
Sbjct: 119 KEKYDKDIALYRTKGIA 135
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E M
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 103/160 (64%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGR+T+YA FVQ CREEHKKKHPE+ V F EFSKKC+ERW+TMS KEK +F E++ +D
Sbjct: 23 KPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWETMSAKEKSKFEELSKED 82
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
KKRY++EM+ Y PP + R KI+++ P +GDIA
Sbjct: 83 KKRYESEMKDYVPPKGAKKQKKKKDPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIA 142
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+KW + K YEQ A+K K +Y+K++ AY+ ++
Sbjct: 143 KKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYRAKT 182
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 104/161 (64%), Gaps = 24/161 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GEK R KIK +NP +GDIAK
Sbjct: 67 KVRYEREMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGLSIGDIAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+LG+ W VK YE+ A K K +Y+K++ Y+ + +A
Sbjct: 127 KLGEMWNSSSAEVKQPYEKKAAKLKEKYDKDIALYRTKGIA 167
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E M
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 103/160 (64%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGR+T++A FVQ CREEHKKKHPE+ V F EFSKKC+ERWKTMS KEK +F E++ +D
Sbjct: 23 KPRGRLTSHALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKTMSAKEKSKFEELSKED 82
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
KKRY++EM+ Y PP + R KI+++ P +GDIA
Sbjct: 83 KKRYESEMKDYVPPKGAKKQKKKKDPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIA 142
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+KW + K YEQ A+K K +Y+K++ AY+ ++
Sbjct: 143 KKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYRAKT 182
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 97/160 (60%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ +AYA+FV CREEHKKKHP +V FAEFSKKC+ERWKTMS KEK +F E+A D
Sbjct: 30 KPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSSKEKVKFDELAKTD 89
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RYD EM++Y PP + R KIK+DNP +GDIA
Sbjct: 90 KARYDREMKTYVPPKGAKKVKKKKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIA 149
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ WA K YE A K K +YEK++ AY+ +
Sbjct: 150 KKLGELWATQSAKDKAPYEAKAAKLKEKYEKDVAAYRAKG 189
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 50 KTMSEKEKKRFHEMADKD--KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGK 107
++++EK + R E KD K R T +Y + K K + +K+ +
Sbjct: 10 RSVAEKARLRQIEAMTKDPNKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSE 69
Query: 108 KWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+W + K K++++A+ DKARY++EM Y
Sbjct: 70 RWKTMSSKEKVKFDELAKTDKARYDREMKTY 100
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ C EHKKKHP+ +V FAEFS+KC+ERWKTMS KEK +F EMA D
Sbjct: 8 KPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP E R KIK D+P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W++ K YEQ A K K +YEK++ AY+ +S
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKS 166
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 104/165 (63%), Gaps = 25/165 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V F++FSKKC+ERWK+MS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKSMSAKEKGKFEDLAKGD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGK-------------------------IKQDNPEYGVGDIA 102
K RY+ EM++Y PP GE +GK IK + P +GD A
Sbjct: 68 KARYEREMKTYIPPKGETKGKRKKDPNAPKRPPSAFFIFCSEHRPQIKSETPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
K+LG+ WA+ P K +EQ A K K +YEK++ AY+ + + V
Sbjct: 128 KKLGELWAEQTPKDKLPHEQKAAKLKEKYEKDVAAYRAKGKSDVG 172
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 122 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 181
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 182 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 241
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 242 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 277
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 99/154 (64%), Gaps = 22/154 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERW+TMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRTMSAKEKGKFEDMAKGD 67
Query: 68 KKRYDTEMQSYTPPAG----------------------EKRGKIKQDNPEYGVGDIAKEL 105
K RYD EM++Y PP G E R KIK D+P +GD AK+L
Sbjct: 68 KARYDREMKNYIPPKGVKKRKDPNAPKRPPSAFFLFCSEHRPKIKSDHPGLSIGDTAKKL 127
Query: 106 GKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
G+ W+ K +EQ A K K +Y+K++ AY+
Sbjct: 128 GEMWSLQTAKDKLPFEQKALKLKEKYDKDIAAYR 161
>gi|386783903|gb|AFJ24846.1| high mobility group-1 [Schmidtea mediterranea]
Length = 192
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 110/176 (62%), Gaps = 29/176 (16%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D KP+G T YA FVQV REEHKKKHP+E +VF+EFSK+C+E+WK MS KEK+RF ++A
Sbjct: 3 DKKPKGAKTPYACFVQVVREEHKKKHPDEQIVFSEFSKRCSEKWKEMSPKEKQRFMDIAA 62
Query: 66 KDKKRYDTEMQSYTPPAG-------------------------EKRGKIKQDNPEYGVGD 100
KDK+RY EM +Y PPAG E R KIK++NPEY VGD
Sbjct: 63 KDKERYLKEMDNYQPPAGTKNKRKIKDPNKPKGAWTAFFFFSDEHRKKIKEENPEYKVGD 122
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEADEEDDE 156
+AK LGK W K+KYE+ A++DK RY KE+ YK S PV+++ D+
Sbjct: 123 VAKVLGKMWEACKD--KSKYEEQAKRDKERYNKELEEYK--SGTPVSKKTKGAGDQ 174
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKXAAKLKEKYEKDIAAYRAKG 166
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 108/167 (64%), Gaps = 28/167 (16%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP + KP+G+M+AYA FVQ CR+EH+KK+P++ VVF EFSKKCAERWKTM++ EKKRF
Sbjct: 1 MPPKDKNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKTMNDGEKKRF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEKRG----------------------------KIKQD 92
++A+ DK+RY+ EM Y PP G + G K++
Sbjct: 61 QDLAETDKRRYEREMAKYVPPKGAEGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAA 120
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+P++ VG+IAK LG++W ++ S K KYE+ A+ +KARY+KE+ YK
Sbjct: 121 HPDFQVGEIAKILGRQWKEISDSDKAKYEKKAQTEKARYQKELAEYK 167
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 101/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ+CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 107/167 (64%), Gaps = 29/167 (17%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MPK+K+ KP+G+M+AYA FVQ CR EH+KK+P + VVF EFS+KCA RWKTM++ EKKRF
Sbjct: 1 MPKDKN-KPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRF 59
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEKRG----------------------------KIKQD 92
+A+ DK+RY+ +M Y PP G + G K++
Sbjct: 60 QALAEADKRRYEQDMAKYVPPKGAEGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAA 119
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+P++ VGDIAK LGK+W ++ S K KYE+ A+ +KARY+KE+ YK
Sbjct: 120 HPDFQVGDIAKILGKQWKEISDSDKAKYEKKAQTEKARYQKELAEYK 166
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|395840000|ref|XP_003792858.1| PREDICTED: high mobility group protein B2 [Otolemur garnettii]
Length = 209
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKND 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 97/160 (60%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ ++YAFFV CREEHKKKHP +V FAEFSKKC+ERWKTMS KEK +F EMA D
Sbjct: 7 KPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEMAKND 66
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RYD EM++Y PP + R KIK+DNP +GDIA
Sbjct: 67 KVRYDREMKTYVPPKGAKKGKKKKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIA 126
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ WA K YE A + K +YEK++ AY+ +
Sbjct: 127 KKLGEMWATQSAKDKAPYEAKAARLKEKYEKDVAAYRAKG 166
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 65 DKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMA 124
D +K R T ++ + K K + +K+ ++W + P K K+E+MA
Sbjct: 4 DPNKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSPKEKGKFEEMA 63
Query: 125 EKDKARYEKEMTAY 138
+ DK RY++EM Y
Sbjct: 64 KNDKVRYDREMKTY 77
>gi|431918327|gb|ELK17554.1| High mobility group protein B2 [Pteropus alecto]
Length = 209
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|426220609|ref|XP_004004507.1| PREDICTED: high mobility group protein B2 [Ovis aries]
Length = 205
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|296195168|ref|XP_002745261.1| PREDICTED: high mobility group protein B2-like isoform 2
[Callithrix jacchus]
Length = 205
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta africana]
Length = 210
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2 isoform 1 [Pongo abelii]
gi|297674680|ref|XP_002815341.1| PREDICTED: high mobility group protein B2 isoform 2 [Pongo abelii]
gi|395735499|ref|XP_003776594.1| PREDICTED: high mobility group protein B2 [Pongo abelii]
gi|402870856|ref|XP_003899415.1| PREDICTED: high mobility group protein B2 isoform 1 [Papio anubis]
gi|402870858|ref|XP_003899416.1| PREDICTED: high mobility group protein B2 isoform 2 [Papio anubis]
gi|402871219|ref|XP_003899573.1| PREDICTED: high mobility group protein B2-like [Papio anubis]
gi|90086209|dbj|BAE91657.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 101/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ+CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 32 KPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKPKFEDMAKSD 91
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 92 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 151
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 152 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 187
>gi|410955200|ref|XP_003984245.1| PREDICTED: high mobility group protein B2-like [Felis catus]
Length = 329
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMSEKEK +F
Sbjct: 1 MGKGDPSKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSEKEKSKF 60
Query: 61 HEMADKDKKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEY 96
+MA DK RYD EM++ PP+ E R KIK ++P
Sbjct: 61 EDMAKSDKARYDREMKNCVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
+GDIAK+LG+ W++ K YEQ A K K +Y K++ AY+ + + V ++
Sbjct: 121 PIGDIAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYGKDIAAYRTKGKSEVGKKG 174
>gi|355687725|gb|EHH26309.1| hypothetical protein EGK_16239 [Macaca mulatta]
Length = 209
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 99/156 (63%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHPE +V FAEFSKKC+ERWKTMS KEK +F MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEGMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KVRYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 102/160 (63%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGR+T+YA FVQ CREEHKKKHPE+ V F EFSKKC+E WKTMS KEK +F E++ +D
Sbjct: 23 KPRGRLTSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSEGWKTMSAKEKSKFEELSKED 82
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
KKRY++EM+ Y PP + R KI+++ P +GDIA
Sbjct: 83 KKRYESEMKDYVPPKGAKKQKKKKDPNAPKRPPSGFFIFSAHLRPKIREECPGLSIGDIA 142
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+KW + K YEQ A+K K +Y+K++ AY+ ++
Sbjct: 143 KKLGEKWNAMGSEEKLPYEQQADKLKEKYKKDVAAYRAKT 182
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 145 bits (367), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 105/167 (62%), Gaps = 24/167 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
+LG+ W++ K YEQ A K K +YEK++ AY+ + + V ++
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKG 174
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 24/174 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F
Sbjct: 1 MAKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKTMSAKEKSKF 60
Query: 61 HEMADKDKKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEY 96
+MA DK RYD EM++Y PP+ E R KIK ++P
Sbjct: 61 EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
+GD AK+LG+ W++ K YEQ A K K +YEK++ AY+ + + V ++
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKG 174
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 100/157 (63%), Gaps = 25/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT-------------------PPAG------EKRGKIKQDNPEYGVGDIA 102
K RYD EM++Y PP+ E R KIK ++P +GD A
Sbjct: 68 KARYDREMKNYVPPKGGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
K+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 164
>gi|226372550|gb|ACO51900.1| High mobility group protein B2 [Rana catesbeiana]
Length = 212
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 101/165 (61%), Gaps = 25/165 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS K K +F ++A D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVSFAEFSKKCSERWKTMSAKGKGKFEDLAKGD 67
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RY+ EM++Y PP E R +IK D P +GD A
Sbjct: 68 KVRYEREMKTYIPPKGEKGGKRKKDPNAPKRPPSAFFLFCSENRPQIKNDTPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
K+LG+ W++ P K +EQ A K K +YEK++ AY+ + + V
Sbjct: 128 KKLGELWSEQTPKDKQPFEQKAAKLKEKYEKDVAAYRAKGSSDVG 172
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKK+HP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK+ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYERKAAKLKGKYEKDTAAYRAKG 166
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEHSVKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|62660600|ref|XP_573625.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|392333089|ref|XP_003752789.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 104/167 (62%), Gaps = 24/167 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M+ YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSLYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGNKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
+LG+ W++ K YEQ A K K +YEK++ AY+ + + V ++
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKG 174
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 144 bits (364), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GDIAK
Sbjct: 68 KVRYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGSTIGDIAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTATDDKLPYERKAAKLKEKYEKDVAAYRAKG 166
>gi|74153177|dbj|BAB27638.3| unnamed protein product [Mus musculus]
Length = 191
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|6680229|ref|NP_032278.1| high mobility group protein B2 [Mus musculus]
gi|1708259|sp|P30681.3|HMGB2_MOUSE RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|609169|emb|CAA86727.1| high mobility group 2 protein [Mus musculus]
gi|12834643|dbj|BAB22988.1| unnamed protein product [Mus musculus]
gi|12842629|dbj|BAB25672.1| unnamed protein product [Mus musculus]
gi|12849395|dbj|BAB28323.1| unnamed protein product [Mus musculus]
gi|52789313|gb|AAH83108.1| High mobility group box 2 [Mus musculus]
gi|55777186|gb|AAH46759.1| High mobility group box 2 [Mus musculus]
gi|74179666|dbj|BAE22481.1| unnamed protein product [Mus musculus]
gi|74179668|dbj|BAE22482.1| unnamed protein product [Mus musculus]
gi|74226660|dbj|BAE26982.1| unnamed protein product [Mus musculus]
Length = 210
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|11527222|gb|AAG36939.1|AF267733_1 high mobility group protein B2 [Mus musculus]
gi|12805183|gb|AAH02050.1| High mobility group box 2 [Mus musculus]
gi|74150328|dbj|BAE32214.1| unnamed protein product [Mus musculus]
gi|148672860|gb|EDL04807.1| mCG4647 [Mus musculus]
Length = 210
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 25/165 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFEDMAKGD 67
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RY+ EM++Y PP E+R +IK + P +GD A
Sbjct: 68 KVRYEREMKTYIPPKGETKGKKKKDPNAPKRPPSAFFLFCSEQRPQIKSETPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
K+LG++W++ K +EQ A K K +YEK++ AY+ + + V
Sbjct: 128 KKLGERWSEQTSKDKLPFEQKAAKLKEKYEKDVAAYRAKGKSDVG 172
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 103/165 (62%), Gaps = 25/165 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKGKFEDMAKGD 67
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RY+ EM++Y PP E+R +IK + P +GD A
Sbjct: 68 KVRYEREMKTYIPPKGETKGKKKKDPNAPKRPPSAFFLFCSEQRPQIKSETPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
K+LG++W++ K +EQ A K K +YEK++ AY+ + + V
Sbjct: 128 KKLGERWSEQTSKDKLPFEQKAAKLKEKYEKDVAAYRAKGKSDVG 172
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 97/155 (62%), Gaps = 24/155 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPR +M++YAFFVQ+CREEHKKKHP+ ++ FAEFSKKC+ERWKTMS KEK +F MA D
Sbjct: 32 KPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFENMAKSD 91
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP E R +IK ++P +GD AK
Sbjct: 92 KARYDREMKNYVPPKGAKKGKKKDPNAPKRPPSAFFLFCSEHRPEIKSEHPGLSIGDTAK 151
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W++ K YEQ A K K +YEK++ AY
Sbjct: 152 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAY 186
>gi|74185387|dbj|BAE30167.1| unnamed protein product [Mus musculus]
Length = 181
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENRPKIKIEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 96/156 (61%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHK+KHP+ +V FAEFSKKC+ERWKTMS KEK +F MA
Sbjct: 43 KPRGKMSSYAFFVQTCREEHKEKHPDSSVGFAEFSKKCSERWKTMSAKEKSKFEGMAKSG 102
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP E R KIK ++P +GD AK
Sbjct: 103 KVRYDREMKNYVPPKGDKKGKEKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 162
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W+ K YEQ A K K +YEK++ AY+
Sbjct: 163 KLGEMWSQQSAKDKQPYEQKAAKLKEKYEKDIAAYR 198
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GDIAK
Sbjct: 68 KVRYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGSTIGDIAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K +E+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTATDDKLPFERKAAKLKEKYEKDVAAYRAKG 166
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMARAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KVRYEREMKTYVPPKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K +E+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTSSEDKQPFEKKAGKLKEKYEKDIAAYRAKG 166
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 101/168 (60%), Gaps = 24/168 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYA+FVQ CREEHKKK+PE V F+EFSKKCA RWKTMS KEK +F + A++D
Sbjct: 8 KPKGKMSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKTMSPKEKSKFEDQANQD 67
Query: 68 KKRYDTEMQSYTPPA------------------------GEKRGKIKQDNPEYGVGDIAK 103
K RY++EM SY PP E+R KIK +P +G+GD+AK
Sbjct: 68 KARYESEMTSYGPPGKRGKKAKKDPNAPKRPPSGFFVFCAEQRPKIKAQHPSFGIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEAD 151
+LG+ W ++ S K Y A K K +Y K++ YK + P A
Sbjct: 128 KLGEAWNNLTDSSKQPYLAKANKLKEKYRKDVADYKRGTGKPGGAGAS 175
>gi|62638360|ref|XP_574279.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
gi|109460525|ref|XP_001074365.1| PREDICTED: high mobility group protein B2-like [Rattus norvegicus]
Length = 209
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 103/167 (61%), Gaps = 24/167 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHK KHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
+LG+ W++ K YEQ A K K YEK++ AY+ + + V ++
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEEYEKDIAAYRAKGKSEVGKKG 174
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri boliviensis
boliviensis]
Length = 202
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 100/157 (63%), Gaps = 22/157 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA D
Sbjct: 8 KPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKAD 67
Query: 68 KKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKEL 105
K RYD EM+ Y PP+G E R KIK NP +GD+AK+L
Sbjct: 68 KVRYDREMKDYGPAKGGKKKKDPNASKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKL 127
Query: 106 GKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
G+ W +++ S K Y A K K +YEK++ YK++
Sbjct: 128 GEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|256070479|ref|XP_002571570.1| high mobility group protein [Schistosoma mansoni]
gi|97976778|tpe|CAJ29301.1| TPA: putative high mobility group B2 protein [Schistosoma mansoni]
gi|353230496|emb|CCD76667.1| high mobility group protein [Schistosoma mansoni]
Length = 226
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 105/174 (60%), Gaps = 31/174 (17%)
Query: 1 MPKEKD-VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
M K KD KP+G M+AYA FVQV REEHKKKHP E +VF++FSKKCAERWK M+ KEKKR
Sbjct: 1 MNKTKDKNKPKGPMSAYACFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKR 60
Query: 60 FHEMADKDKKRYDTEMQSYTPP----------------------------AGEKRGKIKQ 91
F ++A D++R++ EM Y PP E R K+++
Sbjct: 61 FEDLAVLDRERFNREMCDYVPPDGMKKGKKRKGPKDPTVPARAWSAFFFFCDEFRSKVRE 120
Query: 92 DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
NP++ V DIAKELG++W K KYE +A+KDK RYE++M Y+ + P
Sbjct: 121 SNPDWKVADIAKELGRQWETCQD--KAKYELLAQKDKQRYEEDMIKYRAGTYVP 172
>gi|226486704|emb|CAX74429.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 226
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 31/174 (17%)
Query: 1 MPKEKD-VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
M K KD KP+G M+AY+ FVQV REEHKKKHP E +VF++FSKKCAERWK M+ KEKKR
Sbjct: 1 MNKTKDKNKPKGPMSAYSCFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKR 60
Query: 60 FHEMADKDKKRYDTEMQSYTPP----------------------------AGEKRGKIKQ 91
F ++A D++R++ EM Y PP E R K+++
Sbjct: 61 FEDLAVLDRERFNREMCDYVPPDGIKKGKKRKGPKDPSVPARAWSAFFFFCDEFRAKVRE 120
Query: 92 DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
NP++ V DIAKELG++W K KYE +A+KDK RYE++M Y+ + P
Sbjct: 121 SNPDWKVADIAKELGRQWESCQD--KAKYELLAQKDKQRYEEDMIKYRAGTYVP 172
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 99/156 (63%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KARGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|56758270|gb|AAW27275.1| SJCHGC02538 protein [Schistosoma japonicum]
gi|226486700|emb|CAX74427.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226486702|emb|CAX74428.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 226
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 105/174 (60%), Gaps = 31/174 (17%)
Query: 1 MPKEKD-VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
M K KD KP+G M+AY+ FVQV REEHKKKHP E +VF++FSKKCAERWK M+ KEKKR
Sbjct: 1 MNKTKDKNKPKGPMSAYSCFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKR 60
Query: 60 FHEMADKDKKRYDTEMQSYTPP----------------------------AGEKRGKIKQ 91
F ++A D++R++ EM Y PP E R K+++
Sbjct: 61 FEDLAVLDRERFNREMCDYVPPDGIKKGKKRKGPKDPSVPARAWSAFFFFCDEFRAKVRE 120
Query: 92 DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
NP++ V DIAKELG++W K KYE +A+KDK RYE++M Y+ + P
Sbjct: 121 SNPDWKVADIAKELGRQWESCQD--KAKYELLAQKDKQRYEEDMIKYRAGTYVP 172
>gi|109469081|ref|XP_001074673.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|293346414|ref|XP_002726304.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392346830|ref|XP_003749644.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 98/158 (62%), Gaps = 23/158 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK MS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK-----------------------RGKIKQDNPEYGVGDIAKE 104
K RY+ EM++Y PP GE R KIK ++P +GD+ K+
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFLFCSEYRPKIKGEHPALSIGDVTKK 127
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG+ W + K E+MA K K +YEK+ AY+ +
Sbjct: 128 LGEVWTNTASDDKQPCEKMAAKLKEKYEKDTAAYRAKG 165
>gi|296227498|ref|XP_002759405.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 215
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 102/159 (64%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LGK W++ K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGKMWSNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K Y + A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAVYDKQPYGKKAAKLKEKYEKDIAAYRAKG 166
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFQDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K Y+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KVHYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAILKEKYEKDIAAYRTKG 166
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 101/160 (63%), Gaps = 24/160 (15%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KPRG+M++YA+FVQ CREEHKKKHPE V F+EFSKKC+ERWKTMS KEK +F +MA
Sbjct: 6 TKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKL 65
Query: 67 DKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIA 102
DK RY+ EM++Y PP GEK R K+K++ P +GD+A
Sbjct: 66 DKARYEREMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVA 125
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K LG+ W + K YE+ A K K +YEK++ AY+++
Sbjct: 126 KRLGEMWNKISSEEKQPYEKKAAKLKEKYEKDIAAYRSKG 165
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD + +M SY R + K+ +PE V + +K+ ++W + K K+E M
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DKARYE+EM Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 101/160 (63%), Gaps = 24/160 (15%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KPRG+M++YA+FVQ CREEHKKKHPE V F+EFSKKC+ERWKTMS KEK +F +MA
Sbjct: 6 TKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKL 65
Query: 67 DKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIA 102
DK RY+ EM++Y PP GEK R K+K++ P +GD+A
Sbjct: 66 DKARYEREMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVA 125
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K LG+ W + K YE+ A K K +YEK++ AY+++
Sbjct: 126 KRLGEMWNKISSEEKQPYEKKAAKLKEKYEKDIAAYRSKG 165
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD + +M SY R + K+ +PE V + +K+ ++W + K K+E M
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DKARYE+EM Y
Sbjct: 63 AKLDKARYEREMKNY 77
>gi|395542387|ref|XP_003773114.1| PREDICTED: high mobility group protein B2 isoform 1 [Sarcophilus
harrisii]
gi|395542389|ref|XP_003773115.1| PREDICTED: high mobility group protein B2 isoform 2 [Sarcophilus
harrisii]
Length = 207
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 98/156 (62%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFEDLAKGD 67
Query: 68 KKRYDTEMQSYT------------------PPA------GEKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCAEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ K K +YEK++ AY+
Sbjct: 128 KLGELWSEQSAKDKLPYEQKVAKLKEKYEKDIAAYR 163
>gi|126331239|ref|XP_001365344.1| PREDICTED: high mobility group protein B2-like [Monodelphis
domestica]
Length = 207
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 98/156 (62%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKTMSAKEKSKFEDLAKGD 67
Query: 68 KKRYDTEMQSYT------------------PPA------GEKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCAEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ K K +YEK++ AY+
Sbjct: 128 KLGELWSEQSAKDKLPYEQKVAKLKEKYEKDIAAYR 163
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KVRYEREMKTYIPPKGETKKKFKDPSAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKASKLKEKYEKDIAAYQAKG 166
>gi|27466905|gb|AAO12859.1| high mobility group protein [Branchiostoma belcheri tsingtauense]
Length = 164
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 104/164 (63%), Gaps = 29/164 (17%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MPK+K+ KP+G+M+AYA FVQ CR EH+KK+P + VVF EFS+KCA RWKTM++ EKKRF
Sbjct: 1 MPKDKN-KPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKTMNDDEKKRF 59
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEKRG----------------------------KIKQD 92
+A+ DK+RY+ M Y PP G + G K++
Sbjct: 60 QVLAEADKRRYEQNMAKYVPPKGAEGGRRKRKKKDPNAPKRAMSAFFMYCADARPKVRAA 119
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
+P++ VGDIAK LGK+W ++ S K KYE+ A+ ++ARY+KE+
Sbjct: 120 HPDFQVGDIAKILGKQWKEISDSDKAKYEKKAQTERARYQKELA 163
>gi|291413749|ref|XP_002723129.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 219
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 97/155 (62%), Gaps = 24/155 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHK+KHP+ +V F EFSKKC+ERWKTMS KE +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKRKHPDSSVNFVEFSKKCSERWKTMSAKENSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W++ K YEQ A K K +YEK++ AY
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAY 162
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 101/161 (62%), Gaps = 24/161 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M++YA+FVQ CREEHKKKHPE +V FAEFSKKC+ERWKTMS+KEK +F +MA D
Sbjct: 7 KPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKEKGKFEDMAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ +M++Y PP G+K R K+K ++P +GD AK
Sbjct: 67 KVRYERDMKNYDPPKGQKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+LG+ W K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 KLGEMWNSSSAENKQPYERKAAKLKEKYDKDIVAYRTKGTV 167
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 211
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y P GE R KIK ++P +GD+ K
Sbjct: 68 KARYEREMKTYISPKGETKKKFKDPNAPKTPPSAFFLFCSEYRPKIKGEHPGLSIGDVVK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+MA K K +YEK++ AY+ +
Sbjct: 128 KLGEMWTNTAADDKQPYEKMAAKLKEKYEKDIAAYRAKG 166
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 25/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFEDMAKAD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GE R KIK ++P +GDIAK
Sbjct: 67 KVRYEREMKSYIPPKGETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGSTIGDIAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 127 KLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAYRAKG 165
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 141 bits (356), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 25/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMS-KEKTKFEDMAKAD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GE R KIK ++P +GDIAK
Sbjct: 67 KVRYEREMKSYIPPKGETKKRFKDPNAPKRPPSAFFLFCSDFRPKIKGEHPGSTIGDIAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 127 KLGEMWNNTATDDKLPYERRAAKLKEKYEKDVAAYRAKG 165
>gi|348543652|ref|XP_003459297.1| PREDICTED: high mobility group protein B2-like isoform 2
[Oreochromis niloticus]
Length = 187
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 102/150 (68%), Gaps = 14/150 (9%)
Query: 5 KDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KD+ KP+G+ +AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK +S +KK F +M
Sbjct: 4 KDINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDM 63
Query: 64 ADKDKKRYDTEMQSYTPPAG-EKRGK------------IKQDNPEYGVGDIAKELGKKWA 110
A DK RY+ EM+ Y PP G KRG+ +KQ P +GD AK+LG+ W+
Sbjct: 64 AKADKVRYNREMKDYVPPKGFGKRGRKRKDPNAPKRPPVKQQYPGLSIGDCAKKLGEMWS 123
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+ S K YE+ A+K + +Y+++M AY+
Sbjct: 124 KLSQSEKQPYEEKAQKLREKYDRDMVAYRG 153
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 104/166 (62%), Gaps = 24/166 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K + KPRGRM++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F
Sbjct: 1 MGKGEPKKPRGRMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEY 96
+MA DK RY+ EM++Y PP GE R KIK ++P
Sbjct: 61 EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GD+AK+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 98/157 (62%), Gaps = 22/157 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK MS KEK +F EMA D
Sbjct: 5 KPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKNMSGKEKSKFDEMAKAD 64
Query: 68 KKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKEL 105
K RYD EM+ Y PP+G E R KIK NP +GD+AK+L
Sbjct: 65 KLRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKL 124
Query: 106 GKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
G+ W ++ + K Y A K K +YEK++ YK++
Sbjct: 125 GEMWNNLSDNEKQPYNNKAAKLKEKYEKDVADYKSKG 161
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W + K YE+ A K K +YEKE+ AY+
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKEIAAYR 163
>gi|291414887|ref|XP_002723687.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 209
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 99/156 (63%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ ++ K YEQ A K K +YEK++ AY+
Sbjct: 128 KLGEMRSEHSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|348525340|ref|XP_003450180.1| PREDICTED: high mobility group-T protein-like isoform 2
[Oreochromis niloticus]
Length = 184
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 101/143 (70%), Gaps = 8/143 (5%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN-----PEY---GVGDIAKELGKKWADVDPSVKTK 119
K RY+ EM++Y PP G+K+ + K N PEY +GD AK+LG+ W K
Sbjct: 67 KLRYEREMKNYVPPKGQKKKRFKDPNAPKRPPEYPGLSIGDTAKKLGEMWNSSSAEEKQP 126
Query: 120 YEQMAEKDKARYEKEMTAYKNRS 142
YE+ A K K +Y+K++ AY+ +
Sbjct: 127 YEKKAAKLKEKYDKDIVAYRTKG 149
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD K+ +M SY R + K+ +P+ V + +K+ ++W + P K K+E M
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKLRYEREMKNY 77
>gi|432953331|ref|XP_004085353.1| PREDICTED: high mobility group protein B2-like isoform 2 [Oryzias
latipes]
Length = 187
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 101/150 (67%), Gaps = 14/150 (9%)
Query: 5 KDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KDV KP+G+ +AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK +S +KK F +M
Sbjct: 4 KDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDM 63
Query: 64 ADKDKKRYDTEMQSYTPPAG-EKRGK------------IKQDNPEYGVGDIAKELGKKWA 110
A DK RY+ EM Y PP G KRG+ +KQ P +GD AK+LG+ W+
Sbjct: 64 AKADKVRYNREMCDYVPPKGFGKRGRKRKDPNAPKRPPVKQQYPGLSIGDCAKKLGEMWS 123
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+ S K YE+ A+K + +Y+++M AY+
Sbjct: 124 KLSQSEKQPYEEKAQKLREKYDRDMVAYRG 153
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 25/154 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YA+FVQ CREEHKKK+PE +V FAEFSKKC+ERWKTMSEKEK RF +MA DK RYD
Sbjct: 13 MSSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYD 72
Query: 73 TEMQSYTPPAGEK-------------------------RGKIKQDNPEYGVGDIAKELGK 107
EM++Y PP GE+ R K++ +NP +G IAK+LG+
Sbjct: 73 REMKTYVPPKGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGE 132
Query: 108 KWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
W + K+ YE+ K K +Y+K+M +Y+++
Sbjct: 133 MWNNAPADEKSIYERKTAKLKEKYDKDMASYRSK 166
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 25/154 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YA+FVQ CREEHKKK+PE +V FAEFSKKC+ERWKTMSEKEK RF +MA DK RYD
Sbjct: 13 MSSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYD 72
Query: 73 TEMQSYTPPAGEK-------------------------RGKIKQDNPEYGVGDIAKELGK 107
EM++Y PP GE+ R K++ +NP +G IAK+LG+
Sbjct: 73 REMKTYVPPKGERGSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGE 132
Query: 108 KWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
W + K+ YE+ K K +Y+K+M +Y+++
Sbjct: 133 MWNNAPADEKSIYERKTAKLKEKYDKDMASYRSK 166
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 215
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK++F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE + KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K Y + A K K ++EK + AY+ +
Sbjct: 128 KLGELWNNTAAEDKQPYGKKAAKLKEKHEKGIAAYRAKG 166
>gi|444726589|gb|ELW67113.1| High mobility group protein B1, partial [Tupaia chinensis]
Length = 219
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 97/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAF VQ CREEHKKKHP+ +V F+E SKKC+ERWKTMS KEK +F +MA D
Sbjct: 14 KPRGKMSSYAFSVQTCREEHKKKHPDASVSFSELSKKCSERWKTMSAKEKGKFEDMAKAD 73
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 74 KARYEREMKTYIPPKGETKKEVRGSQCTQEASFGLFLFCSEYRPKIKGEHPGLSIGDVAK 133
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + YE A K K +YEK++ AY+ +
Sbjct: 134 KLGEMWNNTAAGDTQPYENKAAKLKEKYEKDIAAYQAKG 172
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|297297620|ref|XP_001106417.2| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 210
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 97/156 (62%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHPE +V FAEFSKKC+ERWKTMS KEK +F MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKTMSAKEKSKFEGMAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K YD EM++Y PP+ E R KIK ++P GD AK
Sbjct: 68 KVCYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSTGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W++ K YEQ A K K +Y+K++ AY+
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLKEKYQKDIAAYR 163
>gi|221221710|gb|ACM09516.1| High mobility group protein B1 [Salmo salar]
Length = 179
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 95/141 (67%), Gaps = 8/141 (5%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK MS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEKR--------GKIKQDNPEYGVGDIAKELGKKWADVDPSVKTK 119
K RY+ EM++Y PP G+K+ KIK ++P +GD AK+LG W K
Sbjct: 67 KVRYEREMKNYIPPNGQKKKRFKDPNAPKIKSEHPGLSIGDTAKKLGVMWNSSAAEEKKP 126
Query: 120 YEQMAEKDKARYEKEMTAYKN 140
YE+ A K +Y+K++ Y+
Sbjct: 127 YEKKAATLKEKYDKDIAPYRT 147
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + P K K+E M
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK + +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y P GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPHKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K Y +MA K K +YEK++ AY+ +
Sbjct: 128 KLGEMWTNTAADDKQPYGKMAAKLKEKYEKDIAAYRAKG 166
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|291415373|ref|XP_002723927.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 99/156 (63%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA +
Sbjct: 32 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSE 91
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 92 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 151
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ ++ K YEQ A K K +YEK++ AY+
Sbjct: 152 KLGEMRSEHSAKDKQPYEQKAAKLKEKYEKDIAAYR 187
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|146218567|gb|AAI40014.1| High-mobility group box 1 [synthetic construct]
gi|146218571|gb|AAI40019.1| High-mobility group box 1 [synthetic construct]
gi|146327050|gb|AAI41845.1| High-mobility group box 1 [Homo sapiens]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQHYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|296224352|ref|XP_002758030.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390474708|ref|XP_003734829.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRTPSVFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|26342222|dbj|BAC34773.1| unnamed protein product [Mus musculus]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|291410693|ref|XP_002721624.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRTPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 33 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 92
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 93 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 152
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 153 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 191
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1 [Nomascus
leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3 [Nomascus
leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5 [Nomascus
leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6 [Nomascus
leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7 [Nomascus
leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8 [Nomascus
leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 213
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 97/163 (59%), Gaps = 26/163 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ ++YAFF+ CREEHK+KHP +V FAEFSKKC+ERWKTMS KEK +F E+A D
Sbjct: 2 KPRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKTMSAKEKAKFEELAKTD 61
Query: 68 KKRYDTEMQSYTPP--------------------------AGEKRGKIKQDNPEYGVGDI 101
K RYD EM++Y PP E R +IK++ P +GD
Sbjct: 62 KIRYDREMKTYIPPKGAKGKGKKKKDPNAPKRPPSAFFVFCSEHRPRIKEECPGISIGDT 121
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
AK+LG+ W+ K YE A K K +YEKE+ AY+ + V+
Sbjct: 122 AKKLGELWSTQSSKEKAPYEAKAAKLKEKYEKEVAAYRAKGVS 164
>gi|40352857|gb|AAH64790.1| Hmgb1 protein [Mus musculus]
Length = 215
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|410910284|ref|XP_003968620.1| PREDICTED: high mobility group-T protein-like isoform 2 [Takifugu
rubripes]
Length = 184
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 100/147 (68%), Gaps = 12/147 (8%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEKRGK------------IKQDNPEYGVGDIAKELGKKWADVDPS 115
K RY+ EM++Y PP G K+ + +K +NP +GD AK+LG+ W
Sbjct: 67 KVRYEREMKNYVPPKGHKKKRFKDPNAPKRPPYVKSENPGLTIGDTAKKLGEMWNSKTAE 126
Query: 116 VKTKYEQMAEKDKARYEKEMTAYKNRS 142
K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 EKQPYEKKAAKLKEKYDKDIVAYRTKG 153
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD K+ +M SY R + K+ +P+ V + +K+ ++W + P K K+E M
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 97/154 (62%), Gaps = 24/154 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YA+FVQ CREEHKKKHPE V F+EFSKKC+ERWKTMS KEK +F +MA DK RY+
Sbjct: 1 MSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKLDKARYE 60
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP GEK R K+K++ P +GD+AK+LG+
Sbjct: 61 REMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGLSIGDVAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W K YE+ A + K +YEK++TAY+++
Sbjct: 121 WNKTSSEEKQPYEKKAARLKEKYEKDITAYRSKG 154
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 100/161 (62%), Gaps = 24/161 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M++YA+FVQ CREEHKKKHPE +V FAEFSKKC+ERWKTMS+K K +F +MA D
Sbjct: 7 KPKGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSQKGKGKFEDMAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ +M++Y PP G+K R K+K ++P +GD AK
Sbjct: 67 KVRYERDMKNYDPPKGQKKKRFKDPNAPKRPPSAFFLFCGDFRPKVKSEHPGLTIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+LG+ W K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 KLGEMWNSSSAENKQPYERKAAKLKEKYDKDIVAYRTKGTV 167
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From Human
High Mobility Group Protein B1
Length = 173
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 15 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 74
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 75 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 134
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 135 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 173
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|291395415|ref|XP_002714100.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 96/155 (61%), Gaps = 24/155 (15%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
PRG+M++YAFFVQ CREEHKKKHP+ ++ FAEFSKKC+ERWKTMS KEK +F +MA DK
Sbjct: 9 PRGKMSSYAFFVQTCREEHKKKHPDSSINFAEFSKKCSERWKTMSAKEKSKFEDMAKSDK 68
Query: 69 KRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAKE 104
YD EM++Y PP E R KI+ ++ +GD AK+
Sbjct: 69 ACYDREMKNYVPPKGAKKGKKKDPNAPKRPPSAFFLFCSEHRPKIRSEHSGLSIGDTAKK 128
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
LG+ W++ + YEQ A K K +YEK++ AY+
Sbjct: 129 LGEMWSEQSAKDEQPYEQKAAKLKEKYEKDIAAYR 163
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|221220618|gb|ACM08970.1| High mobility group protein B3 [Salmo salar]
gi|223646914|gb|ACN10215.1| High mobility group protein B3 [Salmo salar]
gi|223672777|gb|ACN12570.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 96/155 (61%), Gaps = 24/155 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYA+FVQ CREEHK K+PE V F+EFSKKC+ RWKTMS KEK +F + A +D
Sbjct: 8 KPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFEDQAKQD 67
Query: 68 KKRYDTEMQSYTPPA------------------------GEKRGKIKQDNPEYGVGDIAK 103
K RYD+EM SY PP E+R KIK +P +G+GD+AK
Sbjct: 68 KARYDSEMTSYGPPGKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNFGIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W ++ S K Y A K K +Y+K++ Y
Sbjct: 128 KLGEMWNNLTDSNKQPYLAKANKLKEKYQKDVADY 162
>gi|221219912|gb|ACM08617.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 96/155 (61%), Gaps = 24/155 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYA+FVQ CREEHK K+PE V F+EFSKKC+ RWKTMS KEK +F + A +D
Sbjct: 8 KPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFEDQAKQD 67
Query: 68 KKRYDTEMQSYTPPA------------------------GEKRGKIKQDNPEYGVGDIAK 103
K RYD+EM SY PP E+R KIK +P +G+GD+AK
Sbjct: 68 KARYDSEMTSYGPPGKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNFGIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W ++ S K Y A K K +Y+K++ Y
Sbjct: 128 KLGEMWNNLTDSNKQPYLAKANKLKEKYQKDVADY 162
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIPAYRAKG 166
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKHPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 22 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 81
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 82 KVRYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 141
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 142 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 180
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KVRYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 98/154 (63%), Gaps = 24/154 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YA+FVQ CREEHKKKHPE V F+EFSKKC+ERWKTMS KEK +F +MA +DK RY+
Sbjct: 1 MSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFEDMAKQDKVRYE 60
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP GEK R K+K++ P +GD+AK+LG+
Sbjct: 61 REMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLSIGDVAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W K +E+ A + K +YEK++TAY+++
Sbjct: 121 WNKTSAEEKQPFEKKAARLKEKYEKDITAYRSKG 154
>gi|296202119|ref|XP_002748265.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390463329|ref|XP_003733013.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYKKEMKTYIPPKGETKKKFEDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEIWNNTAADDKQHYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHK+KHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK +P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGKHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|300677966|gb|ADK27290.1| high-mobility-group B1a [Gekko japonicus]
Length = 215
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F EMA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEEMAKGD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KVRYEREMKNYIPPKGESKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K +E+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAGDDKQPFEKKAAKLKEKYEKDIAAYRAKG 166
>gi|221220328|gb|ACM08825.1| High mobility group protein B3 [Salmo salar]
Length = 203
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 95/155 (61%), Gaps = 24/155 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYA+FVQ CREEHK K+PE V F+EFSKKC+ RWKTMS KEK +F + A +D
Sbjct: 8 KPKGKMSAYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKTMSPKEKSKFEDQAKQD 67
Query: 68 KKRYDTEMQSYTPPA------------------------GEKRGKIKQDNPEYGVGDIAK 103
K RYD EM SY PP E+R KIK +P +G+GD+AK
Sbjct: 68 KARYDLEMTSYGPPGKRGKKALKDPNAPKRPPSGFFVFCAEQRPKIKAQHPNFGIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W ++ S K Y A K K +Y+K++ Y
Sbjct: 128 KLGEMWNNLTDSNKQPYLAKANKLKEKYQKDVADY 162
>gi|444722008|gb|ELW62714.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 103/166 (62%), Gaps = 24/166 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKT+S KEK +F
Sbjct: 1 MDKGNPTKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTVSAKEKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEY 96
+MA DK RY+ EM++Y P GE R KIK ++P
Sbjct: 61 EDMAKADKARYEREMKTYIPLKGETKKKFKDPNAPKRPPSAFFFFCSEYRPKIKGEHPGL 120
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GD+AK+LG+ W++ K YE+ A K K +YEK++ AY+ +
Sbjct: 121 SIGDVAKKLGEMWSNTAADAKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|444730527|gb|ELW70909.1| High mobility group protein B1 [Tupaia chinensis]
Length = 238
Score = 138 bits (347), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ C EEHKKKHP+ +V F+EFSKKC+ERWK MS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKAMSAKEKGKFEDMAKVD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KI+ ++P +GD AK
Sbjct: 68 KTRYEREMKTYIPPKGETKKKFKDPNAPKRPPLAFFLFCSEYRPKIEGEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGELWNNTAANDKQPYEKEAAKLKEKYEKDIAAYRAKG 166
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +G++AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGNVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS +EK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDAAVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KVRYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|225706046|gb|ACO08869.1| High mobility group-T protein [Osmerus mordax]
Length = 204
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 103/168 (61%), Gaps = 24/168 (14%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A
Sbjct: 6 TKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLAKL 65
Query: 67 DKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIA 102
DK RY+ EM++Y PP GEK R K+K + P +GD+A
Sbjct: 66 DKVRYEREMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCADFRAKVKGETPGLTIGDVA 125
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
K+LG+ W K YE+ A K K +YEK++ AY+ + V+ A
Sbjct: 126 KKLGEMWNGTCAEDKQPYEKKAAKLKEKYEKDIAAYRAKGKVGVSVPA 173
>gi|225704132|gb|ACO07912.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 24/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK MS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G+K R KIK ++P +GD AK
Sbjct: 67 KVRYEGEMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+LG W K YE+ A K +Y+K++ +Y+
Sbjct: 127 KLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRT 163
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + P K K+E M
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE EM Y
Sbjct: 63 AKQDKVRYEGEMKNY 77
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 100/160 (62%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFS+KC+ERWKTMS KEK +F ++A +D
Sbjct: 11 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGKFEDLAKQD 70
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RYD EM Y P E R K+K ++P +G++A
Sbjct: 71 KVRYDREMMDYVPAKGGKKKKKFKDPNAPKRPPSAFFIFCSEFRPKVKGEHPGLTIGEVA 130
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ W + + K YE+ A K K +YEK++ AY+ ++
Sbjct: 131 KKLGELWNNTNSEDKQPYEKKASKLKEKYEKDVAAYRQKT 170
>gi|225703866|gb|ACO07779.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 24/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK MS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G+K R KIK ++P +GD AK
Sbjct: 67 KVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+LG W K YE+ A K +Y+K++ +Y+
Sbjct: 127 KLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRT 163
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + P K K+E M
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|221221922|gb|ACM09622.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 24/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK MS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G+K R KIK ++P +GD AK
Sbjct: 67 KVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+LG W K YE+ A K +Y+K++ +Y+
Sbjct: 127 KLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRT 163
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + P K K+E M
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|221219434|gb|ACM08378.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 24/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK MS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G+K R KIK ++P +GD AK
Sbjct: 67 KVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+LG W K YE+ A K +Y+K++ +Y+
Sbjct: 127 KLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRT 163
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + P K K+E M
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWKPMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 65 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 124
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 125 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 184
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 185 NLSDSEKQPYNNKAAKLKEKYEKDVADYKSKG 216
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP E R KIK ++P VGD+AK
Sbjct: 68 KARYEREMKTYIPPKEETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSVGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNAAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 103/166 (62%), Gaps = 24/166 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K + KPRG+M++YAFFVQ CREE KKKHP+ +V F+EFSKKC+ERWKTMS KEK +F
Sbjct: 1 MGKGEPKKPRGKMSSYAFFVQTCREERKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEY 96
+MA DK RY+ EM++Y PP GE R KIK ++P
Sbjct: 61 EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
VGD+AK+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 121 SVGDVAKKLGQMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CRE HKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREGHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 214
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YE ++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEMDIAAYRAKG 166
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 100/162 (61%), Gaps = 22/162 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KP+G+M+AYA+FVQ CREEHKKK PE V FAEFSKKC+ RWKTMS KEK +F
Sbjct: 1 MAKGTPGKPKGKMSAYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKTMSGKEKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+MA +DK RYD EM + PP+G + R KIK +P G+
Sbjct: 61 EDMAKQDKVRYDNEMMHFAPGGKKGRKKDPNAPKRPPSGFFIFCADHRPKIKAQHPSLGI 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
GD+AK+LG++W ++ + K Y A K K +Y+K++ YK+
Sbjct: 121 GDVAKKLGEQWNNLTDATKQPYLIKANKLKDKYQKDVADYKS 162
>gi|410910282|ref|XP_003968619.1| PREDICTED: high mobility group-T protein-like isoform 1 [Takifugu
rubripes]
Length = 196
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G K R K+K +NP +GD AK
Sbjct: 67 KVRYEREMKNYVPPKGHKKKRFKDPNAPKRPPSAFFLFCAELRPKVKSENPGLTIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 KLGEMWNSKTAEEKQPYEKKAAKLKEKYDKDIVAYRTKG 165
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD K+ +M SY R + K+ +P+ V + +K+ ++W + P K K+E M
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFS++C+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|478813|pir||S29857 nonhistone chromosomal protein HMG-1 - human
gi|184251|gb|AAA64970.1| HMG-1 [Homo sapiens]
Length = 216
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP G+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|119584724|gb|EAW64320.1| hCG26831 [Homo sapiens]
Length = 212
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP G+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPTGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRLPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|47227840|emb|CAG09003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G K R K+K +NP +GD AK
Sbjct: 67 KVRYEREMKNYVPPKGHKKKRFKDPNAPKRPPSAFFLFCAEFRPKVKSENPGLTIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 KLGEMWNSKTAEDKQPYEKKAAKLKEKYDKDIVAYRTKG 165
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD K+ +M SY R + K+ +P+ V + +K+ ++W + P K K+E M
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G+K R KIK ++P +GD AK
Sbjct: 67 KVRYEREMKNYVPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSESPGLSIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 KLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYRTKG 165
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD K+ +M SY R + K+ +P+ V + +K+ ++W + P K K+E M
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 102/163 (62%), Gaps = 27/163 (16%)
Query: 5 KDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KDV KP+G+ +AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK +S +KK F +M
Sbjct: 7 KDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFEDM 66
Query: 64 ADKDKKRYDTEMQSYTPPAG-EKRGK-------------------------IKQDNPEYG 97
A DK RY+ EM+ Y PP G KRG+ +KQ P
Sbjct: 67 AKADKVRYNREMRDYVPPKGFGKRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQFPGLS 126
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+GD AK+LG+ W+ + S K YE+ A+K + +Y+++M AY+
Sbjct: 127 IGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAYRG 169
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEH KKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKVD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAVDDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|51858856|gb|AAH81424.1| Hmgb3b protein [Danio rerio]
Length = 166
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 98/162 (60%), Gaps = 23/162 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KP+G+M+AYA+FV+ CREEH KK+P V F+EFSKKC+ERWKTMS KEK +F
Sbjct: 1 MAKGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A +DK RYD EM Y PP+G E+R IK NP G
Sbjct: 61 EDLAKQDKARYDQEMMHYNPGKKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSLG 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GD+AK+LG W ++ S K + A+K K +Y+K+M YK
Sbjct: 121 IGDVAKKLGGMWNNLSDSEKQPFLSNADKLKDKYQKDMAFYK 162
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 100/162 (61%), Gaps = 24/162 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A DK RYD
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDKARYD 60
Query: 73 TEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP+ E R KIK ++P +GD AK+LG+
Sbjct: 61 REMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
W++ K YEQ A K K +YEK++ AY+ + + V ++
Sbjct: 121 WSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEVGKKG 162
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 94/151 (62%), Gaps = 22/151 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 87 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 146
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 147 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 206
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
++ S K Y A K K +YEK++ YK++
Sbjct: 207 NLSDSEKQPYINKAAKLKEKYEKDVADYKSK 237
>gi|358337868|dbj|GAA37121.2| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 378
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 104/167 (62%), Gaps = 31/167 (18%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+K+ +P+ M+AYA FVQV REEH+KKHP ENV+F+EFSKKCAE+WK MS ++++ F
Sbjct: 8 MVKDKN-RPKHPMSAYACFVQVIREEHRKKHPNENVIFSEFSKKCAEKWKQMSNEQRRCF 66
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK----------------------------RGKIKQD 92
EMA D R++ EM Y PPAG + R KI+ +
Sbjct: 67 EEMAKLDLDRFNREMAHYVPPAGMRRGRRRRRTKDPAMPKRSWSAFFFFCDAFRSKIRNE 126
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+P++ V DIAKELG++W + + K KYE+ A+ DK RYE++M YK
Sbjct: 127 HPDWKVSDIAKELGRRWEEC--TDKEKYERHAQNDKLRYEQDMQKYK 171
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 102/163 (62%), Gaps = 27/163 (16%)
Query: 5 KDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KD+ KP+G+ +AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK +S +KK F +M
Sbjct: 4 KDINKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDM 63
Query: 64 ADKDKKRYDTEMQSYTPPAG-EKRGK-------------------------IKQDNPEYG 97
A DK RY+ EM+ Y PP G KRG+ +KQ P
Sbjct: 64 AKADKVRYNREMKDYVPPKGFGKRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLS 123
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+GD AK+LG+ W+ + S K YE+ A+K + +Y+++M AY+
Sbjct: 124 IGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAYRG 166
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP VGD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISVGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKT S KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTKSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|148709727|gb|EDL41673.1| mCG9102 [Mus musculus]
Length = 215
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y P GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPTKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu rubripes]
Length = 201
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 102/163 (62%), Gaps = 27/163 (16%)
Query: 5 KDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KDV KP+G+ +AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK +S +KK F +M
Sbjct: 4 KDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKGLSASDKKCFEDM 63
Query: 64 ADKDKKRYDTEMQSYTPPAG-EKRGK-------------------------IKQDNPEYG 97
A DK RY+ EM+ Y PP G KRG+ +KQ P
Sbjct: 64 AKADKVRYNREMRDYVPPKGFGKRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLS 123
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+GD AK+LG+ W+ + S K YE+ A+K + +Y+++M AY+
Sbjct: 124 IGDCAKKLGEMWSKLTQSEKQPYEEKAQKLREKYDRDMVAYRG 166
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 100/164 (60%), Gaps = 22/164 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KP+G+M+AYA+FVQ CREEHKKK+PE V FAEFSKKC+ERW++MS KEK +F
Sbjct: 1 MAKRDPKKPKGKMSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRSMSGKEKSKF 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
++A DK RYD EM+ + PP+G E R KIK NP +
Sbjct: 61 EDLAKADKVRYDREMKDFGPVKKGKRNKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
GDIAK+LG+ W ++ K Y A K K +YEK++ YK++
Sbjct: 121 GDIAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K Y+ EM+++ PP GE R KIK ++P +GD+AK
Sbjct: 68 KAHYEREMKTFIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|417397281|gb|JAA45674.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 216
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 101/160 (63%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQ-SYTPPAGEK------------------------RGKIKQDNPEYGVGDIA 102
K RY+ EM+ SY PP GE R KIK ++P +GD+A
Sbjct: 68 KARYEREMKTSYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 167
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 94/151 (62%), Gaps = 22/151 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 49 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 108
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 109 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 168
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
++ S K Y A K K +YEK++ YK++
Sbjct: 169 NLSDSEKQPYINKAAKLKEKYEKDVADYKSK 199
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 99/161 (61%), Gaps = 26/161 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ ++YAFFV CREEHKKKHP +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 7 KPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDLAKND 66
Query: 68 KKRYDTEMQSYT--------------------PPAG------EKRGKIKQDNPEYGVGDI 101
K RY+ EM++Y PP+ + R +IK++NP +GDI
Sbjct: 67 KVRYEREMKTYIPPKGAPGKGKKKKDPNAPKRPPSAFFVFCSDHRPRIKEENPGISIGDI 126
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
AK+LG+ W+ K YE A K K +YEK++ AYK +S
Sbjct: 127 AKKLGEFWSTQTSKDKVPYEARAGKLKEKYEKDVAAYKAKS 167
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 65 DKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMA 124
D +K R T ++ + K K G + +K+ ++W + K K+E +A
Sbjct: 4 DPNKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKTMSAKEKVKFEDLA 63
Query: 125 EKDKARYEKEMTAY 138
+ DK RYE+EM Y
Sbjct: 64 KNDKVRYEREMKTY 77
>gi|149726074|ref|XP_001503141.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 215
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 100/156 (64%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KE+ +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEEGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE + KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W + K YE+ A K K +YEK++ AY+
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 94/151 (62%), Gaps = 22/151 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 49 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 108
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 109 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 168
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
++ S K Y A K K +YEK++ YK++
Sbjct: 169 NLSDSEKQPYINKAAKLKEKYEKDVADYKSK 199
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 98/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V FAEFSK+C+ERWKTMS KEK +F +MA D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKRCSERWKTMSPKEKGKFEDMAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G K R K+K D P +GD AK
Sbjct: 67 KVRYEREMKNYIPPKGHKKKRFKDPNAPKRPPSAFFLFCADFRPKVKGDYPGLSIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 KLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYRTKG 165
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD K+ +M SY R + K+ +PE V + +K ++W + P K K+E M
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKRCSERWKTMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM Y
Sbjct: 63 AKLDKVRYEREMKNY 77
>gi|62955511|ref|NP_001017769.1| high mobility group protein B3 [Danio rerio]
gi|62202670|gb|AAH93186.1| High-mobility group box 3b [Danio rerio]
gi|182890656|gb|AAI64996.1| Hmgb3b protein [Danio rerio]
Length = 198
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 98/162 (60%), Gaps = 23/162 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KP+G+M+AYA+FV+ CREEH KK+P V F+EFSKKC+ERWKTMS KEK +F
Sbjct: 1 MAKGDPGKPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A +DK RYD EM Y PP+G E+R IK NP G
Sbjct: 61 EDLAKQDKARYDQEMMHYNPGKKGRKQKKDPNAPRRPPSGFFLFCAEQRPIIKAQNPSLG 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GD+AK+LG W ++ S K + A+K K +Y+K+M Y+
Sbjct: 121 IGDVAKKLGGMWNNLSDSEKQPFLSNADKLKDKYQKDMAFYR 162
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 33 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 92
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 93 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 152
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 153 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 184
>gi|348525338|ref|XP_003450179.1| PREDICTED: high mobility group-T protein-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G+K R KIK + P +GD AK
Sbjct: 67 KLRYEREMKNYVPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSEYPGLSIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 KLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYRTKG 165
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD K+ +M SY R + K+ +P+ V + +K+ ++W + P K K+E M
Sbjct: 3 KDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKLRYEREMKNY 77
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo abelii]
Length = 199
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|256090348|ref|XP_002581158.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|350646061|emb|CCD59339.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 293
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 103/167 (61%), Gaps = 31/167 (18%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+K+ +P+ MT YA FVQV REEH+KKHP ENV+F+EFSKKCAE+WK M+ +++K F
Sbjct: 2 MVKDKN-RPKPPMTPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWKLMNMEQRKCF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK----------------------------RGKIKQD 92
EMA D +R++ EM Y PP G K R KI+ +
Sbjct: 61 EEMAKLDTERFNREMAHYIPPVGMKRGRRRRRIKDPSMPKRSWSAFFFFCDAFRSKIRSE 120
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+P++ V DIAKELG++W + S K KYE+ A+ DK RYE++M YK
Sbjct: 121 HPDWKVSDIAKELGRRWEEC--SDKEKYERRAQNDKLRYEQDMEKYK 165
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 214
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+E SKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK+ AY+ +
Sbjct: 128 KLGEMWNNTASDDKQPYEKKAAKLKEKYEKDTAAYRAKG 166
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYMTKAAKLKEKYEKDVADYKSKG 164
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 101/163 (61%), Gaps = 27/163 (16%)
Query: 5 KDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KDV KP+G+ +AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK +S +KK F +M
Sbjct: 4 KDVNKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSPSDKKCFEDM 63
Query: 64 ADKDKKRYDTEMQSYTPPAG-EKRGK-------------------------IKQDNPEYG 97
A DK RY+ EM Y PP G KRG+ +KQ P
Sbjct: 64 AKADKVRYNREMCDYVPPKGFGKRGRKRKDPNAPKRPPSAFFVFCSEYRPSVKQQYPGLS 123
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+GD AK+LG+ W+ + S K YE+ A+K + +Y+++M AY+
Sbjct: 124 IGDCAKKLGEMWSKLSQSEKQPYEEKAQKLREKYDRDMVAYRG 166
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 54 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 113
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 114 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 173
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 174 NLSDSEKQPYMTKAAKLKEKYEKDVADYKSKG 205
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix jacchus]
Length = 203
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio anubis]
Length = 201
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 84 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 143
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 144 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 203
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 204 NLSDSEKQPYINKAAKLKEKYEKDVADYKSKG 235
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri boliviensis
boliviensis]
Length = 215
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++ AFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSCAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKVD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K Y+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KACYEREMKTYIPPKGETKKKLKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LGK W + + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGKMWNNTAANDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|395753165|ref|XP_003779555.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
Length = 215
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 98/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ C+EE KKKHP+ +V F+EFSK C+ERWKT+S KEK +F +M D
Sbjct: 8 KPRGKMSSYAFFVQTCQEEKKKKHPDASVNFSEFSKTCSERWKTISAKEKGKFEDMVKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDLNAPKRTPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAVKLKEKYEKDIAAYRAKG 166
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYINKAAKLKEKYEKDVADYKSKG 164
>gi|432895946|ref|XP_004076239.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 206
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 97/160 (60%), Gaps = 24/160 (15%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA +
Sbjct: 6 TKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFEDMARQ 65
Query: 67 DKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIA 102
DK RYD EM SY P G K R K+K ++P +GD+A
Sbjct: 66 DKVRYDREMMSYVPAKGAKTKKFKDPNAPKRPPSAFFIFCSEFRPKVKGESPGLTIGDVA 125
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K LG+ W K YE+ A K K +Y K++ AY+ +
Sbjct: 126 KRLGEMWNSTSAEDKQPYEKKAAKLKEKYGKDIAAYRAKG 165
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 28 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 87
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 88 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 147
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 148 NLSDSEKQPYITKAAKLKEKYEKDVADYKSKG 179
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 93/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYTPP----------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y P E R KIK NP +GD+AK+LG+ W
Sbjct: 73 WEMKDYGPAKGGKKKKDPNAPKRPPSRFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K +Y A K K +YEK++T YK++
Sbjct: 133 NLSDSDKQQYITKAAKLKEKYEKDVTDYKSKG 164
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 135 bits (340), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYINKAAKLKEKYEKDVADYKSKG 164
>gi|97976795|tpe|CAJ29302.1| TPA: putative high mobility group B3 protein [Schistosoma mansoni]
Length = 246
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 103/167 (61%), Gaps = 31/167 (18%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+K+ +P+ MT YA FVQV REEH+KKHP ENV+F+EFSKKCAE+WK M+ +++K F
Sbjct: 2 MVKDKN-RPKPPMTPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWKLMNMEQRKCF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK----------------------------RGKIKQD 92
EMA D +R++ EM Y PP G K R KI+ +
Sbjct: 61 EEMAKLDTERFNREMAHYIPPVGMKRGRRRRRIKDPSMPKRSWSAFFFFCDAFRSKIRSE 120
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+P++ V DIAKELG++W + S K KYE+ A+ DK RYE++M YK
Sbjct: 121 HPDWKVSDIAKELGRRWEEC--SDKEKYERRAQNDKLRYEQDMEKYK 165
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 33 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 92
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 93 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 152
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ + K Y A K K +YEK++ YK++
Sbjct: 153 NLSDNEKQPYVTKAAKLKEKYEKDVADYKSKG 184
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +M+ D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMSKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y P GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYISPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|351698366|gb|EHB01285.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 211
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 95/157 (60%), Gaps = 25/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +M
Sbjct: 8 KPRGKMSSYAFFVQNCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMPKSY 67
Query: 68 KKRYDTEMQSYT-------------------PPAG------EKRGKIKQDNPEYGVGDIA 102
K RYD EM++Y P + E R KIK ++P +GD A
Sbjct: 68 KTRYDREMKNYVPPKGGDKKGKKKDPNAPKRPSSAFFLFCCEHRPKIKSEHPGLSIGDTA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
KELGK W++ K YEQ K K +YEK++ Y+
Sbjct: 128 KELGKMWSEQSAKDKQPYEQKVAKLKEKYEKDIAPYR 164
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 93/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ K Y A K K +YEK++ YK++
Sbjct: 133 NLSDGEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta africana]
Length = 200
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ + K Y A K K +YEK++ YK++
Sbjct: 133 NLSDNEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 93/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ K Y A K K +YEK++ YK++
Sbjct: 133 NLSDGEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|339242839|ref|XP_003377345.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316973861|gb|EFV57410.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 229
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 103/168 (61%), Gaps = 25/168 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ T Y FFV++C EEHKKK+P ENV E SKKC+ +WKTM+++EK RF+E+A KD
Sbjct: 36 KPRGKTTPYGFFVKMCYEEHKKKYPNENVQVTEVSKKCSAKWKTMTQEEKHRFYELAAKD 95
Query: 68 KKRYDTEMQSYT-------------PPA------------GEKRGKIKQDNPEYGVGDIA 102
+ RYD E+++Y P A KR +I+Q +P++ VG +A
Sbjct: 96 RVRYDAELEAYGGDGLRKRKRSKKDPNAPKRALSAFFFFSNSKRAEIQQAHPDWKVGQVA 155
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
+ELG+ W +D K K+E MA KD+ RYE++M YK+ + V + A
Sbjct: 156 QELGRMWKAIDEDEKRKFEDMAAKDRTRYEEDMKNYKSGGKSDVGKRA 203
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 93/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 15 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 74
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 75 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 134
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ K Y A K K +YEK++ YK++
Sbjct: 135 NLSDGEKQPYNNKAAKLKEKYEKDVADYKSKG 166
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 95/152 (62%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R K+K NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKLKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|348541671|ref|XP_003458310.1| PREDICTED: high mobility group-T protein-like [Oreochromis
niloticus]
Length = 206
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 97/158 (61%), Gaps = 25/158 (15%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KPRG+M++YA+FVQ CREEHKKKHPE +V FAEFSKKC+ERWKTMS KEK +F +MA +
Sbjct: 6 TKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFEDMARQ 65
Query: 67 DKKRYDTEMQSYTPPAG-------------------------EKRGKIKQDNPEYGVGDI 101
DK RY+ EM +Y P G E R K+K ++P +GD+
Sbjct: 66 DKARYEREMMNYVPARGGKKKKKYKDPNAPKRPPSAFFIFCSEFRPKVKGESPGLSIGDV 125
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
AK LG+ W K YE+ A K K +YEK++ AY+
Sbjct: 126 AKRLGEMWNSTAAEDKQPYEKKAAKLKEKYEKDIAAYR 163
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD + +M SY R + K+ +PE V + +K+ ++W + K K+E M
Sbjct: 3 KDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A +DKARYE+EM Y
Sbjct: 63 ARQDKARYEREMMNY 77
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ + K Y A K K +YEK++ YK++
Sbjct: 133 NLSDNEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 92/160 (57%), Gaps = 28/160 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM++YA+FVQ CREEHKKKHP ++V F +FS+KC+ERWK +S KEK RF ++A D
Sbjct: 8 KPRGRMSSYAYFVQTCREEHKKKHPNDSVAFTDFSRKCSERWKGLSPKEKLRFEDLARAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRG----------------------------KIKQDNPEYGVG 99
K RYDTEM+ Y P G + G +IK DNP +G
Sbjct: 68 KTRYDTEMKDYAPARGGRGGPAQRKKKDPNAPKRPPSAFFIFCADFRPQIKADNPGMVIG 127
Query: 100 DIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
IAK LG+ W K YE A K +Y+K++ AY+
Sbjct: 128 TIAKRLGEMWGRQTNENKAPYEHKANILKEKYKKDVAAYQ 167
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ + K Y A K K +YEK++ YK++
Sbjct: 133 NLSDNEKQPYVTKAAKLKEKYEKDVADYKSKG 164
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 93/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ K Y A K K +YEK++ YK++
Sbjct: 133 NLSDGEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 19 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 78
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 79 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 138
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ + K Y A K K +YEK++ YK++
Sbjct: 139 NLSDNEKQPYVTKAAKLKEKYEKDVADYKSKG 170
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ + K Y A K K +YEK++ YK++
Sbjct: 133 NLSDNEKQPYVTKAAKLKEKYEKDVADYKSKG 164
>gi|239791505|dbj|BAH72208.1| ACYPI007949 [Acyrthosiphon pisum]
Length = 172
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 80/120 (66%), Gaps = 29/120 (24%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEK-------------------------- 85
M+EKEKKRFHEMADKDK RYDTEMQSY PP GEK
Sbjct: 1 MNEKEKKRFHEMADKDKLRYDTEMQSYIPPKGEKVRGKKRKQIKDPNAPKRSLSAFFWFC 60
Query: 86 ---RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
RGK+K NPEYGVGD+AKELGKKW+D D +VK KYE MAEKDKARYE+EMT YKN+
Sbjct: 61 NDERGKVKAVNPEYGVGDVAKELGKKWSDADITVKQKYEAMAEKDKARYEREMTEYKNKG 120
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F R + K +PE V + +K+ ++W K+++ MA+KDK
Sbjct: 49 PKRSLSAFFWFCNDERGKVKAVNPEYGV--GDVAKELGKKWSDADITVKQKYEAMAEKDK 106
Query: 69 KRYDTEMQSY 78
RY+ EM Y
Sbjct: 107 ARYEREMTEY 116
>gi|62087576|dbj|BAD92235.1| high-mobility group box 1 variant [Homo sapiens]
Length = 176
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 95/150 (63%), Gaps = 24/150 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 10 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 69
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 70 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 129
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+LG+ W + K YE+ A K K +YEK
Sbjct: 130 KLGEMWNNTAADDKQPYEKKAAKLKEKYEK 159
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 3 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 62
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 63 EDMAKADKARYEREMKTY 80
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 99/164 (60%), Gaps = 26/164 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KP+G+M++YA+FVQ CREEHKKK PE V FAEFSKKC+ RWKTMS KEK +F
Sbjct: 1 MAKGTPGKPKGKMSSYAYFVQTCREEHKKKTPEIPVNFAEFSKKCSGRWKTMSGKEKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEKRG------------------------KIKQDNPEY 96
+MA +DK RYD EM + P G K+G KIK +P
Sbjct: 61 DDMAKQDKVRYDNEMMHFAP--GGKKGRKKDPNAPKRPSSGFFIFCADHRPKIKAQHPSL 118
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
G+GD+AK+LG++W ++ + K Y A K K +Y+K++ YK+
Sbjct: 119 GIGDVAKKLGEQWNNLTDATKQPYLIKANKLKDKYQKDVADYKS 162
>gi|449269673|gb|EMC80424.1| High mobility group protein B1 [Columba livia]
Length = 209
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 95/150 (63%), Gaps = 24/150 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KLRYEKEMKNYVPPKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+LG+ W + K YE+ A K K +YEK
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEK 157
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSSKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DK RYEKEM Y
Sbjct: 61 EDMAKADKLRYEKEMKNY 78
>gi|354468511|ref|XP_003496696.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
gi|344237248|gb|EGV93351.1| High mobility group protein B1 [Cricetulus griseus]
Length = 220
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 97/154 (62%), Gaps = 24/154 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
+LG+ W + K +E+ A K K +YEK++
Sbjct: 128 KLGEMWNNTAADDKQPFEKKAAKLKEKYEKDIAG 161
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTM KEK +F ++A D
Sbjct: 8 KPRGKMYSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMYAKEKGKFEDIAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|392351997|ref|XP_003751090.1| PREDICTED: high mobility group protein B2-like, partial [Rattus
norvegicus]
Length = 154
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 91/145 (62%), Gaps = 24/145 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F ++A D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSD 67
Query: 68 KKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP+ E R KIK ++P +GD AK
Sbjct: 68 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDK 128
+LG+ W++ K YEQ A K K
Sbjct: 128 KLGEMWSEQSAKDKQPYEQKAAKLK 152
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D + +M SY R + K+ +P+ V + +K+ ++W + K+K+
Sbjct: 1 MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E +A+ DKARY++EM Y
Sbjct: 61 EDLAKSDKARYDREMKNY 78
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 97/158 (61%), Gaps = 21/158 (13%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYA+FVQ CREEHKKK PE V F+EFSK+C+ RWK M++KEK RF +MA +D
Sbjct: 8 KPKGKMSAYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKAMTDKEKSRFEDMAKQD 67
Query: 68 KKRYDTEMQSYT---------------PPAG------EKRGKIKQDNPEYGVGDIAKELG 106
K RYD EM Y PP+G E R +IK P G+GD+AK+LG
Sbjct: 68 KVRYDQEMMHYMPGKRGKKKDPNAPKRPPSGFFLFCSEHRPQIKAQYPSLGIGDVAKKLG 127
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+ W + + K + A K K +Y+K++ YK +S A
Sbjct: 128 EMWNGLTDANKQPFLMKANKLKDKYQKDVADYKTKSKA 165
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 225
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 93/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK MS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKAMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP VGD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISVGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|225703820|gb|ACO07756.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 193
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 94/157 (59%), Gaps = 24/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CR EHKKK PE +V FAEFSKKC+ERWK MS KEK F +MA +D
Sbjct: 7 KPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWKPMSPKEKGTFEDMAKQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP G+K R KIK ++P +GD AK
Sbjct: 67 KVRYEREMKNYIPPNGQKKKRFKDPNALKRPPSAFFIFCADFRAKIKSEHPGLSIGDTAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+LG W K YE+ A K +Y+K++ +Y+
Sbjct: 127 KLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRT 163
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ PE V + +K+ ++W + P K +E M
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWKPMSPKEKGTFEDM 62
Query: 124 AEKDKARYEKEMTAY 138
A++DK RYE+EM Y
Sbjct: 63 AKQDKVRYEREMKNY 77
>gi|353351504|emb|CBX36444.1| high-mobility-group-1 protein [Plecoglossus altivelis]
Length = 204
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 99/160 (61%), Gaps = 24/160 (15%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KPRG+ ++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A
Sbjct: 6 TKPRGKTSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFEDLAKL 65
Query: 67 DKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIA 102
DK RY+ EM++Y PP GEK R K+K + P +GD+A
Sbjct: 66 DKVRYEREMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCADFRAKVKGETPGPTIGDVA 125
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ W K YE+ A K K +YEK++ AY+ +
Sbjct: 126 KKLGEMWNGTCAEDKQPYEKKAAKLKEKYEKDIAAYRAKG 165
>gi|355700906|gb|EHH28927.1| hypothetical protein EGK_09214, partial [Macaca mulatta]
Length = 263
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 95/150 (63%), Gaps = 24/150 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+LG+ W + K YE+ A K K +YEK
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEK 157
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
M SY R + K+ +P+ V + +K+ ++W + K K+E MA+ DKARYE
Sbjct: 13 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 72
Query: 133 KEMTAY 138
+EM Y
Sbjct: 73 REMKTY 78
>gi|355754606|gb|EHH58507.1| hypothetical protein EGM_08375 [Macaca fascicularis]
Length = 263
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 95/150 (63%), Gaps = 24/150 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+LG+ W + K YE+ A K K +YEK
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEK 157
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+ K+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVPKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|221045048|dbj|BAH14201.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 95/150 (63%), Gaps = 24/150 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+LG+ W + K YE+ A K K +YEK
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEK 157
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|351702997|gb|EHB05916.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 204
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 97/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKH + +V F+E+SKKC+ERWKTMS KEK F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHSDASVKFSEYSKKCSERWKTMSAKEKGTFEDMAKVD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RY+ +M++Y PP E R KIK ++P GD+AK
Sbjct: 68 KARYERKMKTYIPPKEETKKKFKDPNAPKRAPSTFFLFCSEYRPKIKGEHPGLSTGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A + K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAAGDKQPYEKKAAELKEKYEKDIAAYRAKG 166
>gi|392352276|ref|XP_003751165.1| PREDICTED: high mobility group protein B1 [Rattus norvegicus]
Length = 187
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 95/150 (63%), Gaps = 24/150 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+LG+ W + K YE+ A K K +YEK
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEK 157
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 103/173 (59%), Gaps = 29/173 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AY+FFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F E+A DK RYD
Sbjct: 13 MSAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKN-------RSVAPVNEEADEEDDE 156
++ S K Y A K K +YEK++ YK+ + A V ++ EE+DE
Sbjct: 133 NLSDSEKQPYINKAAKLKEKYEKDVADYKSKGKFDGAKGAAKVAQKKVEEEDE 185
>gi|229368114|gb|ACQ59037.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 206
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWKTMS KEK +F ++A +D
Sbjct: 7 KPKGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSLKEKGKFEDLARQD 66
Query: 68 KKRYDTEMQSYTPPAG------------------------EKRGKIKQDNPEYGVGDIAK 103
K RY+ EM SY PP G E R K+K + P +GD+AK
Sbjct: 67 KARYEREMMSYIPPRGIKKKKFKDPNAPKRPPSAFFIFCAEYRPKVKGETPGATIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG+ W + +E+ A K K +YEKE+ AY+ ++
Sbjct: 127 RLGEMWNGTASEDRQPFEKKAAKLKEKYEKEVAAYRAKT 165
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 90/152 (59%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 72
Query: 73 TEMQSYTPP----------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y P E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ K Y A K K +YEK++ YK++
Sbjct: 133 NLSDGEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 90/152 (59%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 28 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 87
Query: 73 TEMQSYTPP----------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y P E R KIK NP +GD+AK+LG+ W
Sbjct: 88 REMKDYGPAKGGKKKKDPNAPKRPPSAFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 147
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ K Y A K K +YEK++ YK++
Sbjct: 148 NLSDGEKQPYNNKAAKLKEKYEKDVADYKSKG 179
>gi|402865885|ref|XP_003897133.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 221
Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 101/165 (61%), Gaps = 30/165 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEM------QSYTPPAGEK------------------------RGKIKQDNPEYG 97
K RY+ EM ++Y PP GE R KIK ++P
Sbjct: 68 KARYEREMKTWPGAKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS 127
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GD+AK+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 IGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 172
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 97/164 (59%), Gaps = 22/164 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KPRG+M++YA+FVQ CREEHKKK+P+ V F++FSK+C+ERWKTMS KEK +F
Sbjct: 1 MAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK----------------------RGKIKQDNPEYGV 98
++A DK RYD EM++Y PP G K R KIK +P +
Sbjct: 61 EDLAKVDKVRYDREMKTYIPPKGSKKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLTI 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
GD+AK+LG+ W K Y A K K +YEK++ Y+ +
Sbjct: 121 GDVAKKLGELWNGCTDEEKKPYNAKAAKLKEKYEKDVADYRTKG 164
>gi|379698916|ref|NP_001243929.1| HMGB protein [Bombyx mori]
gi|337729569|gb|AEI70325.1| HMGB protein [Bombyx mori]
Length = 195
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/93 (68%), Positives = 77/93 (82%), Gaps = 2/93 (2%)
Query: 1 MPKEKDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
MP+ + KPRGRMTAYAFFVQ CREEHKKK+P+ +V+FA FSKKCAERW TMSEKEK+R
Sbjct: 98 MPRSRPYNKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNTMSEKEKQR 157
Query: 60 FHEMADKDKKRYDTEMQSYTPPAGEK-RGKIKQ 91
FHEMA++DK R+D EMQ+Y PP K RG+ +Q
Sbjct: 158 FHEMAEQDKHRFDLEMQNYVPPKDMKVRGRKRQ 190
>gi|89475586|gb|ABD73318.1| high-mobility group box 1 [Oncorhynchus mykiss]
Length = 154
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 88/137 (64%), Gaps = 24/137 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW+TMS KEK +F ++A D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDLAKLD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+SY PP GEK R ++K + P +GD+AK
Sbjct: 67 KVRYEREMRSYIPPKGEKKKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLSIGDVAK 126
Query: 104 ELGKKWADVDPSVKTKY 120
+LG+KW ++ K Y
Sbjct: 127 KLGEKWNNLTAEDKVPY 143
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQM 123
KD ++ +M SY R + K+ +PE V + +K+ ++W + K K+E +
Sbjct: 3 KDPRKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRTMSAKEKGKFEDL 62
Query: 124 AEKDKARYEKEMTAY 138
A+ DK RYE+EM +Y
Sbjct: 63 AKLDKVRYEREMRSY 77
>gi|440900657|gb|ELR51738.1| High mobility group protein B1 [Bos grunniens mutus]
Length = 224
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 84/129 (65%), Gaps = 24/129 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADV 112
+LG+ W +
Sbjct: 128 KLGEMWNNT 136
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 96/162 (59%), Gaps = 22/162 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KPRG+M++YA+FVQ CREEHKKK+P+ V F++FSK+C+ERWKTMS KEK +F
Sbjct: 8 MAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKEKSKF 67
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK----------------------RGKIKQDNPEYGV 98
++A DK RYD EM++Y PP G K R KIK +P +
Sbjct: 68 EDLAKVDKVRYDREMKTYIPPKGSKKKKDPNAPKRPPSGFFLFCSDHRPKIKAGSPGLTI 127
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
GD+AK+LG+ W K Y A K K +YEK++ Y+
Sbjct: 128 GDVAKKLGELWNGCTDEEKKPYNAKAAKLKEKYEKDVADYRT 169
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 59 RFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSV 116
+ +MA +D K+ +M SY R + K+ NP+ V D +K ++W +
Sbjct: 4 KITKMAKRDPKKPRGKMSSYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKTMSGKE 63
Query: 117 KTKYEQMAEKDKARYEKEMTAY 138
K+K+E +A+ DK RY++EM Y
Sbjct: 64 KSKFEDLAKVDKVRYDREMKTY 85
>gi|444712566|gb|ELW53487.1| High mobility group protein B1 [Tupaia chinensis]
Length = 162
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 98/155 (63%), Gaps = 24/155 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ER KTM+ KEK +F +MA +
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERGKTMTAKEKGKFEDMAKVE 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K RY+ EMQ+Y PP GE + KIK ++P +GD+AK
Sbjct: 68 KARYEREMQTYIPPKGEAKKKFKDPNASMRSPLAFFLFCSEYHPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W + K YE+ A K K +YEK++ AY
Sbjct: 128 KLGEMWNNTAADGKQPYEKKAAKLKEKYEKDIAAY 162
>gi|47551063|ref|NP_999708.1| high mobility group protein 1 homolog [Strongylocentrotus
purpuratus]
gi|729735|sp|P40644.1|HMGH_STRPU RecName: Full=High mobility group protein 1 homolog
gi|161521|gb|AAA91277.1| high mobility group 1 protein [Strongylocentrotus purpuratus]
Length = 200
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 89/162 (54%), Gaps = 27/162 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYA+FVQ R EH K HP V FAEFSK C+ RWK + EK K FHE + +D
Sbjct: 10 KPRGRMSAYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKALEEKGKGVFHEKSMRD 69
Query: 68 KKRYDTEMQSYTPPAGEK---------------------------RGKIKQDNPEYGVGD 100
K RYD EMQSY PP GEK R IK +P + VGD
Sbjct: 70 KVRYDREMQSYKPPKGEKNKRRRRRKDPDAPKRNLSAFFIFSGENRAAIKSVHPNWSVGD 129
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
IAKEL +W + K +++ A KDK RY K M YK ++
Sbjct: 130 IAKELAVRWRAMTAGEKIPFDKGAAKDKERYIKAMAEYKAKA 171
>gi|291392907|ref|XP_002712835.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 208
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 96/159 (60%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++Y FFVQ C E+HKK+HP+ +V F+EFSKKC+ERWKTMS K+K +F +MA D
Sbjct: 8 KPRGKMSSYTFFVQTCPEKHKKRHPDASVNFSEFSKKCSERWKTMSAKKKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K RY+ EM+ Y PP GE + KIK ++P +GD+AK
Sbjct: 68 KARYEREMKIYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K E+ A K K +YEK + AY+ +
Sbjct: 128 KLGEMWNNTAAGDKQPCERKAAKLKVKYEKGIAAYQAKG 166
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 94/151 (62%), Gaps = 22/151 (14%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKT+S KEK +F EMA DK RYD
Sbjct: 14 SAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVRYDR 73
Query: 74 EMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W +
Sbjct: 74 EMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNN 133
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 134 LNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 93/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK F EMA DK YD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSEFDEMAKADKVCYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|407263446|ref|XP_003084790.3| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 424
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 97/157 (61%), Gaps = 25/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 16 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 75
Query: 68 KKRYDTEMQSYTPPA-------------------------GEKRGKIKQDNPEYGVGDIA 102
K Y+ +M++Y PP E KIK ++P +GD+A
Sbjct: 76 KAHYERKMKTYIPPPKGEIKKKFKDPNAPKRPPLAFFLFYSEYYPKIKGEHPGLSIGDVA 135
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
K+LG+ W + K YE+ A K K +YEK++ AY+
Sbjct: 136 KKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 172
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 95/154 (61%), Gaps = 24/154 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK++F +MA DK RY+
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKRKFEDMAKADKARYE 60
Query: 73 TEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP GE + KIK ++P +GD+AK+LG+
Sbjct: 61 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAKKLGEL 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W + K Y + A K K ++EK + AY+ +
Sbjct: 121 WNNTAAEDKQPYGKKAAKLKEKHEKGIAAYRAKG 154
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 93/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AY+FFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F E+A DK RYD
Sbjct: 13 MSAYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEIAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYINKAAKLXEKYEKDVADYKSKG 164
>gi|403267260|ref|XP_003925762.1| PREDICTED: uncharacterized protein LOC101050525 [Saimiri
boliviensis boliviensis]
Length = 645
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 75/160 (46%), Positives = 94/160 (58%), Gaps = 19/160 (11%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M + KP+G+++AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK F
Sbjct: 157 MARGDPKKPKGKVSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSRKEKSTF 216
Query: 61 HEMADKDKKRYDTEMQSYT-------------PPAG------EKRGKIKQDNPEYGVGDI 101
EM DK RYD EM+ PP+G E R KIK NP +GD+
Sbjct: 217 DEMTKVDKVRYDQEMKGAAKGGKKKDPDAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDV 276
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
AK LG++ ++ S K A K K R E++ YK++
Sbjct: 277 AKRLGERRNNLSDSGKQPSITKAAKLKERNEEDGAEYKSK 316
>gi|56756178|gb|AAW26264.1| SJCHGC08557 protein [Schistosoma japonicum]
Length = 177
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 102/172 (59%), Gaps = 31/172 (18%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+K+ +P+ M YA FVQV REEH+KKHP ENV+F+EFSKKCAE+WK M+ +++K F
Sbjct: 2 MVKDKN-RPKPPMKPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWKLMNMEQRKCF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK----------------------------RGKIKQD 92
EMA D +R++ EM Y PP + R KI+ +
Sbjct: 61 EEMAKLDTERFNREMAHYIPPVRMRRGRRRKRIKDPSMPKRSWSAFFFFCDAFRSKIRSE 120
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+P++ V DIAKELG++W + S K KYEQ A+ DK RYE++M YK V
Sbjct: 121 HPDWKVSDIAKELGRRWEEC--SDKEKYEQRAQNDKLRYEQDMQKYKGWLVC 170
>gi|392340368|ref|XP_003754052.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|392347889|ref|XP_003749961.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 215
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE + KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K E+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPCEKKAAKLKEKYEKDIAAYRAKG 166
>gi|351715817|gb|EHB18736.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 165
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 94/151 (62%), Gaps = 24/151 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M+ YAFFVQ CREEHKKKHP+ ++ F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSLYAFFVQTCREEHKKKHPDASINFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGK------------------------IKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE K IK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETEKKFKDPNAPKRPPSAFFLFYSEYCPQIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+LG+ W + K YE+ A K K +YEKE
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKE 158
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M Y R + K+ +P+ + + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSLYAFFVQTCREEHKKKHPDASINFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|332260744|ref|XP_003279440.1| PREDICTED: uncharacterized protein LOC100604184 [Nomascus
leucogenys]
Length = 414
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 100/168 (59%), Gaps = 26/168 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KP+G+M+AYAFFVQ CREEHKKK+P+ V FAEFSKKC+ERWKT+SEK+K F
Sbjct: 1 MAKGDPTKPKGKMSAYAFFVQTCREEHKKKNPKVPVNFAEFSKKCSERWKTISEKKKSEF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK----------------------RGKIKQDNPE--- 95
+E+A DK YD +++ Y P G K R KIK NP
Sbjct: 61 NELAKADKVHYDQKIKDYGPATGGKKKKDPNAPQRPLSGFFLFCSEFRPKIKSTNPGKTG 120
Query: 96 -YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+G GD+AK+LG+ W +++ S K + A K K +YEK++ K++
Sbjct: 121 IFGFGDVAKKLGEMWKNLNDSEKQPHITQAAKLKEKYEKDVAVCKSKG 168
>gi|148701877|gb|EDL33824.1| mCG140646 [Mus musculus]
Length = 207
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 98/160 (61%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK + +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKCEDMAKAD 67
Query: 68 KKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGDIA 102
K RY+ EM++Y PP E KIK ++P VGD+A
Sbjct: 68 KARYEREMKTYIPPPQEETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLCVGDVA 127
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KKLGELWNNTAGDDKQPYEKKAAKLKEKYEKDIAAYRAKG 167
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 94/152 (61%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYA+FVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F ++A DK RYD
Sbjct: 13 MSAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSAKEKSKFDDLAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ + PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDFGPVKKGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ K Y A K K +YEK++ YK++
Sbjct: 133 NLNDGEKQPYNNKAAKLKEKYEKDVADYKSKG 164
>gi|51339|emb|CAA47900.1| high mobility group 2 protein [Mus musculus]
Length = 205
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 95/163 (58%), Gaps = 24/163 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +KP G+M++YAFFVQ CREEHKKKHP +V FAE SKKC++RWKTMS KE +F
Sbjct: 1 MGKGDPIKPLGKMSSYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKTMSAKENSKF 60
Query: 61 HEMADKDKKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEY 96
++A DK Y EM++Y PP+ E R KIK + P
Sbjct: 61 EDLAKSDKACYYREMKNYVSPKGDKKGKKKDPNAPKRPPSAFCLFCSENRPKIKIEYPGL 120
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GD AK+LG+ W++ K YEQ A K K +YEK+ AY+
Sbjct: 121 SIGDTAKKLGEMWSEQSAKEKQPYEQKAAKLKEKYEKDFAAYR 163
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 96/154 (62%), Gaps = 24/154 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA DK RY+
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 60
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP GE R KIK ++P +GD+AK+LG+
Sbjct: 61 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W + K YE+ A K K +YEK++ AY+ +
Sbjct: 121 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 154
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 96/154 (62%), Gaps = 24/154 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA DK RY+
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 60
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP GE R KIK ++P +GD+AK+LG+
Sbjct: 61 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W + K YE+ A K K +YEK++ AY+ +
Sbjct: 121 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 154
>gi|62647362|ref|XP_575506.1| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
gi|293346835|ref|XP_001060814.2| PREDICTED: high mobility group protein B1-like isoform 1 [Rattus
norvegicus]
Length = 214
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M+++AFFVQ CREEHKKKH +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSHAFFVQTCREEHKKKHLNASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNALKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K E+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWTNTAVDDKQPCEKKAAKLKEKYEKDIAAYRAKG 166
>gi|351698285|gb|EHB01204.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 215
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 100/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ C E+HKKKHP+ +V F+EFSKK +ERWKT+S +EK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCGEDHKKKHPDASVNFSEFSKKGSERWKTISAEEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++TAY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDITAYRAKG 166
>gi|221219844|gb|ACM08583.1| High mobility group protein B2 [Salmo salar]
Length = 211
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 95/159 (59%), Gaps = 26/159 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+ +AYAFFVQ CREEHK+KHPE++V FAEFSK+C+ERW+ + +++RF +MA D
Sbjct: 8 KPKGKTSAYAFFVQTCREEHKRKHPEQSVNFAEFSKQCSERWRASTATDRRRFEDMAKND 67
Query: 68 KKRYDTEMQSYTPPAG--------------------------EKRGKIKQDNPEYGVGDI 101
K RY+ +M+ Y PP G E R +KQ+ P +G
Sbjct: 68 KVRYERDMRGYVPPKGMAKSGRKKKDPNAPKRPPSAFFVFSAEFRPTVKQEFPGCSIGQC 127
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
AK+LG W P+ K +E+ A + + +Y+K+M AY++
Sbjct: 128 AKKLGIMWGQQTPTQKQPFEEKALRLREKYDKDMAAYRS 166
>gi|281350894|gb|EFB26478.1| hypothetical protein PANDA_002732 [Ailuropoda melanoleuca]
Length = 157
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 94/150 (62%), Gaps = 24/150 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+LG+ W + K YE+ A K K +YEK
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEK 157
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|403255365|ref|XP_003920409.1| PREDICTED: high mobility group protein B1-like, partial [Saimiri
boliviensis boliviensis]
Length = 159
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 92/135 (68%), Gaps = 4/135 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKD 127
K RY+ EM++Y PP GE + K K N +LG+ W + K YE+ A K
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPN----APKRPPKLGEMWNNTAADDKQPYEKKAAKL 123
Query: 128 KARYEKEMTAYKNRS 142
K +YEK++ AY+ +
Sbjct: 124 KEKYEKDIAAYRAKG 138
>gi|322517988|gb|ADX06860.1| high mobility group protein B1 [Sciaenops ocellatus]
Length = 206
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ RWKTMS KEK +F ++A +D
Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSGRWKTMSSKEKGKFEDLARQD 66
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM SY P G K R K+K + P +G++AK
Sbjct: 67 KARYEREMMSYVPARGGKKKKYKDPNAPKRPPSAFFIFCSEFRPKVKGEAPGLTIGEVAK 126
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG+ W K +E+ A K K +YEKE+ AY+ ++
Sbjct: 127 RLGEMWNGTASEDKQPFEKKAAKLKEKYEKEVAAYRQKT 165
>gi|968888|dbj|BAA09924.1| HMG-1 [Homo sapiens]
Length = 215
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 101/159 (63%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPR +M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRRKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ AEK K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAEKLKEKYEKDIAAYRAKG 166
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 92/151 (60%), Gaps = 22/151 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAF VQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFLVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKLRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGVGGKDSNAPKHPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
++ + K Y A K K +YEK++ K++
Sbjct: 133 NLSDNEKQPYNNKAAKLKEKYEKDVADNKSK 163
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 92/152 (60%), Gaps = 23/152 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKK +PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMAKADKVRYD 71
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 72 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 131
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ K Y A K K +YEK++ YK++
Sbjct: 132 NLSDGEKQPYNNKAAKLKEKYEKDVADYKSKG 163
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 92/152 (60%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+P+ V FAEFSKKC+ERWKT+S KEK +F EMA DK YD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPDVPVNFAEFSKKCSERWKTVSGKEKSKFDEMAKADKVHYD 72
Query: 73 TEMQSYTPPAGEKR----------------------GKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y P G K+ KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGSKKKKDPNATKRPPSGFFLFCSEFHPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y A K K +YEK++ A K++
Sbjct: 133 NLNDSEKQPYITKAAKLKEKYEKDVAASKSKG 164
>gi|444706336|gb|ELW47678.1| Leiomodin-1 [Tupaia chinensis]
Length = 823
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 82/129 (63%), Gaps = 24/129 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ C+EEH+KKHPE V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCKEEHRKKHPEAPVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K RY+ EMQ+Y P GE + KIK ++P +GD+AK
Sbjct: 68 KARYEREMQTYIPLKGETKKKFKDPKAPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADV 112
+LG+ W +
Sbjct: 128 KLGEMWTNT 136
>gi|309265997|ref|XP_003086707.1| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 433
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 100/157 (63%), Gaps = 25/157 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFF+Q CR+EHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 6 KPRGKMSSYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 65
Query: 68 KKRYDTEMQSYTPPA-GEKR------------------------GKIKQDNPEYGVGDIA 102
K RY ++++Y PP GE + KIK ++P+ +GD+A
Sbjct: 66 KARYKRKIKTYIPPPKGEIKKKFKDPNAPKRPPSAFFLFYSVYYPKIKGEHPDLSIGDVA 125
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
K+LG+ W + K YE+ A K K +YEK++ AY+
Sbjct: 126 KKLGEMWNNAAADDKQPYEKKAAKLKEKYEKDIAAYR 162
>gi|392883890|gb|AFM90777.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPRRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|444515932|gb|ELV11007.1| High mobility group protein B3 [Tupaia chinensis]
Length = 212
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 96/163 (58%), Gaps = 22/163 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KP+G+++ YAFFVQ CREEHKKK+PE + F EFSKKC++RWKTMS KEK +F
Sbjct: 1 MAKSDPKKPKGKVSTYAFFVQTCREEHKKKNPEVPINFTEFSKKCSKRWKTMSGKEKSKF 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
EMA DK RYD EM+ Y PP+G E KIK NP +
Sbjct: 61 DEMAKADKIRYDWEMKDYGPAKGGKKKKDPNAPERPPSGFLLFCSEFHLKIKSTNPGISI 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
GD+AK+L + W + S K Y A K K +Y+K++ YK++
Sbjct: 121 GDVAKKLVEMWNNFSDSEKQPYITKAAKLKEKYKKDVANYKSK 163
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAIAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP E R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKRETKKKFKDPNAPKRPPSAFFLFCSGYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ G+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KRGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|444732719|gb|ELW72994.1| High mobility group protein B1 [Tupaia chinensis]
Length = 289
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 99/159 (62%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS +EK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP E R KIK ++P VGD+ K
Sbjct: 68 KARYEREMKTYIPPKGKTKKKFKDPNSPKRPPSAFFLFCSEYRPKIKGEHPGLSVGDVTK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +Y+K++ AY+ +
Sbjct: 128 KLGEMWNNTAADEKQPYEKKAAKLKEKYKKDIAAYRAKG 166
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M + D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGEGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAEEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|432117313|gb|ELK37700.1| Putative high mobility group protein B3-like protein [Myotis
davidii]
Length = 147
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 82/136 (60%), Gaps = 21/136 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KP+G+M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS K+K +F
Sbjct: 1 MAKSDPKKPQGKMSAYAFFVQTCREEHKKKNPEVPVSFAEFSKKCSERWKTMSAKKKSKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK---------------------RGKIKQDNPEYGVG 99
EMA DK YD EM Y P G K R KIK NP +G
Sbjct: 61 DEMAKADKVHYDQEMTDYGPAKGGKKKEPNVPKRPTSGFFLFCSEFRPKIKSTNPGSSIG 120
Query: 100 DIAKELGKKWADVDPS 115
D+AK+LG+ W ++ S
Sbjct: 121 DVAKKLGEMWNNLSDS 136
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
MA D K+ +M +Y R + K+ NPE V + +K+ ++W + K+K+
Sbjct: 1 MAKSDPKKPQGKMSAYAFFVQTCREEHKKKNPEVPVSFAEFSKKCSERWKTMSAKKKSKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
++MA+ DK Y++EMT Y
Sbjct: 61 DEMAKADKVHYDQEMTDY 78
>gi|392881066|gb|AFM89365.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|392884250|gb|AFM90957.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|392878084|gb|AFM87874.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|392877754|gb|AFM87709.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|387913840|gb|AFK10529.1| high mobility group protein B1-like protein [Callorhinchus milii]
gi|392873522|gb|AFM85593.1| high mobility group protein [Callorhinchus milii]
gi|392873780|gb|AFM85722.1| high mobility group protein [Callorhinchus milii]
gi|392873902|gb|AFM85783.1| high mobility group protein [Callorhinchus milii]
gi|392873908|gb|AFM85786.1| high mobility group protein [Callorhinchus milii]
gi|392873950|gb|AFM85807.1| high mobility group protein [Callorhinchus milii]
gi|392873998|gb|AFM85831.1| high mobility group protein [Callorhinchus milii]
gi|392874244|gb|AFM85954.1| high mobility group protein [Callorhinchus milii]
gi|392874940|gb|AFM86302.1| high mobility group protein [Callorhinchus milii]
gi|392876248|gb|AFM86956.1| high mobility group protein [Callorhinchus milii]
gi|392876254|gb|AFM86959.1| high mobility group protein [Callorhinchus milii]
gi|392876362|gb|AFM87013.1| high mobility group protein [Callorhinchus milii]
gi|392876946|gb|AFM87305.1| high mobility group protein [Callorhinchus milii]
gi|392877468|gb|AFM87566.1| high mobility group protein [Callorhinchus milii]
gi|392877522|gb|AFM87593.1| high mobility group protein [Callorhinchus milii]
gi|392877744|gb|AFM87704.1| high mobility group protein [Callorhinchus milii]
gi|392879776|gb|AFM88720.1| high mobility group protein [Callorhinchus milii]
gi|392880382|gb|AFM89023.1| high mobility group protein [Callorhinchus milii]
gi|392880776|gb|AFM89220.1| high mobility group protein [Callorhinchus milii]
gi|392881032|gb|AFM89348.1| high mobility group protein [Callorhinchus milii]
gi|392881292|gb|AFM89478.1| high mobility group protein [Callorhinchus milii]
gi|392881318|gb|AFM89491.1| high mobility group protein [Callorhinchus milii]
gi|392883640|gb|AFM90652.1| high mobility group protein [Callorhinchus milii]
gi|392883646|gb|AFM90655.1| high mobility group protein [Callorhinchus milii]
gi|392883680|gb|AFM90672.1| high mobility group protein [Callorhinchus milii]
gi|392883988|gb|AFM90826.1| high mobility group protein [Callorhinchus milii]
gi|392884098|gb|AFM90881.1| high mobility group protein [Callorhinchus milii]
gi|392884156|gb|AFM90910.1| high mobility group protein [Callorhinchus milii]
gi|392884178|gb|AFM90921.1| high mobility group protein [Callorhinchus milii]
gi|392884306|gb|AFM90985.1| high mobility group protein [Callorhinchus milii]
gi|392884308|gb|AFM90986.1| high mobility group protein [Callorhinchus milii]
gi|392884314|gb|AFM90989.1| high mobility group protein [Callorhinchus milii]
gi|392884420|gb|AFM91042.1| high mobility group protein [Callorhinchus milii]
gi|392884450|gb|AFM91057.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|392883682|gb|AFM90673.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|392873666|gb|AFM85665.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|29841393|gb|AAP06425.1| SJCHGC00614 protein [Schistosoma japonicum]
gi|66275794|gb|AAY44044.1| high mobility group B1 [Schistosoma japonicum]
gi|226472340|emb|CAX77206.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472342|emb|CAX77207.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472344|emb|CAX77208.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472346|emb|CAX77209.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472348|emb|CAX77210.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472350|emb|CAX77211.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472352|emb|CAX77212.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472354|emb|CAX77213.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472356|emb|CAX77214.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472358|emb|CAX77215.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472360|emb|CAX77216.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472362|emb|CAX77217.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472364|emb|CAX77218.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472366|emb|CAX77219.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472368|emb|CAX77220.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472370|emb|CAX77221.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 176
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 28/158 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+GRM AYA F+Q R +HKKKHP + F FSK+C+E+WK +S KEKK+F ++A+KD
Sbjct: 7 KPKGRMNAYALFLQSMRADHKKKHPNATLDFKSFSKECSEQWKNLSAKEKKKFKDLAEKD 66
Query: 68 KKRYDTEMQSYTPPAGEKRG--------------------------KIKQDNPEYGVGDI 101
K+RY EM+ Y PPA E R K+K +NP++ V ++
Sbjct: 67 KERYRCEMEHYEPPADEGRSKKRKRDPDAPKKGLSAFFLFCNDERPKVKSENPDWKVSEV 126
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
AKELG++W K KYE +A+ +K RYEK M YK
Sbjct: 127 AKELGRRWEHC--KNKAKYESLAQVEKERYEKAMEKYK 162
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 91/152 (59%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AY FFVQ CREEHKKK+PE V FAEFSKKC+ERWK S KEK +F EMA DK RYD
Sbjct: 13 MSAYDFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKPTSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYINKAAKLKEKYEKDVADYKSKG 164
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like protein
Length = 187
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 21/151 (13%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+P+ + FAEFSKKC+ERWKTMS+KEK +F+E+A DK YD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKFNELAKADKVHYD 72
Query: 73 TEMQSYTPPAGEKR---------------------GKIKQDNPEYGVGDIAKELGKKWAD 111
E++ Y P G K+ K K NP +GD+AK+LG+ W +
Sbjct: 73 QEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLGEMWKN 132
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 LNDSEKQPYITQAAKLKEKYEKDVAVYKSKG 163
>gi|392876742|gb|AFM87203.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEEGGAQLKEKYEKEVAAYRAR 164
>gi|403286915|ref|XP_003934714.1| PREDICTED: high mobility group protein B1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286917|ref|XP_003934715.1| PREDICTED: high mobility group protein B1-like isoform 2 [Saimiri
boliviensis boliviensis]
gi|403286919|ref|XP_003934716.1| PREDICTED: high mobility group protein B1-like isoform 3 [Saimiri
boliviensis boliviensis]
gi|403286921|ref|XP_003934717.1| PREDICTED: high mobility group protein B1-like isoform 4 [Saimiri
boliviensis boliviensis]
Length = 206
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 97/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++ AFFVQ CREEHKK+HP+ +V F+EFSKKC+ERWKTMS KEK + +MA D
Sbjct: 8 KLRGKMSSCAFFVQTCREEHKKQHPDSSVNFSEFSKKCSERWKTMSAKEKGKVEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK + P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEYPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|392876906|gb|AFM87285.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 101/165 (61%), Gaps = 23/165 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCFDHRLRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRARC 165
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 91/151 (60%), Gaps = 22/151 (14%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AYAFFVQ CREEHKKK+PE V FAEFSKKC ERWK MS KEK +F EMA DK RYD
Sbjct: 14 SAYAFFVQTCREEHKKKNPEAPVNFAEFSKKCPERWKIMSGKEKSKFDEMAKADKVRYDQ 73
Query: 74 EMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
EM+ Y PP+G E R KIK N +GD+AK+LG+ W +
Sbjct: 74 EMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNLGISIGDVAKKLGEMWNN 133
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 134 LNDSKKQPYITKAAKLKEKYEKDVADYKSKG 164
>gi|256089447|ref|XP_002580821.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|40365359|gb|AAR85353.1| high mobility group B1 protein [Schistosoma mansoni]
gi|66275796|gb|AAY44045.1| high mobility group B1 [Schistosoma mansoni]
gi|360043524|emb|CCD78937.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 176
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 93/158 (58%), Gaps = 28/158 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G M AYA F+Q R +HKKKHP + F FSK+C+E+WK +S KEKK+F ++ADKD
Sbjct: 7 KPKGAMNAYAAFLQSMRADHKKKHPNVTLDFKSFSKECSEQWKNLSAKEKKKFKDLADKD 66
Query: 68 KKRYDTEMQSYTPPAGEKRG--------------------------KIKQDNPEYGVGDI 101
K+RY EM+ Y PPA E R K+K +NP++ V +I
Sbjct: 67 KERYRCEMEHYEPPADEGRSKKRKRDPDAPKKALSAFFLFCNDERPKVKSENPDWKVSEI 126
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
AKELGK+W K KYE +A+ +K RYEK M YK
Sbjct: 127 AKELGKRWEHC--KNKAKYESLAQVEKQRYEKAMQKYK 162
>gi|444510699|gb|ELV09703.1| High mobility group protein B2 [Tupaia chinensis]
Length = 233
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 97/164 (59%), Gaps = 25/164 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KPRG+M++YAFFVQ C EEHKKKHP+ +V FAEFSKKC+E+WK MS KEK +F
Sbjct: 1 MGKGDHNKPRGKMSSYAFFVQTCGEEHKKKHPDSSVNFAEFSKKCSEKWKAMSAKEKSKF 60
Query: 61 HEMADKDKKRYDTEMQSYT------------------PPAG------EKRGKIKQDNPEY 96
+MA DK RYD EM++Y PP+ E KIK ++P
Sbjct: 61 EDMAKSDKARYDREMKNYVPPKGDKKGKKNDPNVPKRPPSAFFLFCSEHHPKIKSEHPGL 120
Query: 97 GVGDI-AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+GD K+LG+ W++ K EQ A K K +YEK++ AY+
Sbjct: 121 SIGDTEKKKLGEMWSEQSAKDKQPCEQKAAKLKKKYEKDIAAYR 164
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 89/152 (58%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+ E V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNLEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYTPP----------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWA 110
E + Y P + E R KIK NP +GD+AK+LG W
Sbjct: 73 RETKDYGPAKGGKKKKDPNAPKRPLSGFFLFSSEFRPKIKSTNPGISIGDVAKKLGDMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYITKAAKLKEKYEKDVANYKSKG 164
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 29/161 (18%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+K KP+G +T YA F+Q + KKKHP + F FSK+C+E+WK ++ KEKK+F
Sbjct: 541 MAKDKS-KPKGALTPYALFLQSMHADQKKKHPSVTLDFKTFSKECSEQWKNLTAKEKKKF 599
Query: 61 HEMADKDKKRYDTEMQSYTPPAGE--------------------------KRGKIKQDNP 94
++A KDK+RY EMQSY PPA E +R K+K D+P
Sbjct: 600 EDLAAKDKERYRKEMQSYEPPADEGKSRKRKKDPNAPKKALSAFFLFCNDERPKVKADHP 659
Query: 95 EYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEM 135
++ V +IAKELGK+W K+KYE A+ +K RYEK +
Sbjct: 660 DWKVSEIAKELGKRWETCKN--KSKYESQAQVEKQRYEKAL 698
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 57 KKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVG--DIAKELGKKWADVDP 114
++ H MA KDK + + Y K+ +P + +KE ++W ++
Sbjct: 535 RRLLHTMA-KDKSKPKGALTPYALFLQSMHADQKKKHPSVTLDFKTFSKECSEQWKNLTA 593
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYK 139
K K+E +A KDK RY KEM +Y+
Sbjct: 594 KEKKKFEDLAAKDKERYRKEMQSYE 618
>gi|148684659|gb|EDL16606.1| mCG50402 [Mus musculus]
Length = 214
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 101/160 (63%), Gaps = 25/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFF+Q CR+EHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 6 KPRGKMSSYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 65
Query: 68 KKRYDTEMQSYTPPA-GEKR------------------------GKIKQDNPEYGVGDIA 102
K RY ++++Y PP GE + KIK ++P+ +GD+A
Sbjct: 66 KARYKRKIKTYIPPPKGEIKKKFKDPNAPKRPPSAFFLFYSVYYPKIKGEHPDLSIGDVA 125
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 126 KKLGEMWNNAAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 165
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 92/152 (60%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYA+FVQ CREEHKKK+PE V F+EFSKKC+ERW+ MS KEK +F ++A DK RYD
Sbjct: 13 MSAYAYFVQTCREEHKKKNPEIPVNFSEFSKKCSERWRGMSGKEKSKFDDLAKADKVRYD 72
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EMQ + PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 73 REMQDFGPVKKGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGITIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y K K +YEK++ YK++
Sbjct: 133 NLSDSEKQPYNNKGAKLKEKYEKDVADYKSKG 164
>gi|392883584|gb|AFM90624.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 100/165 (60%), Gaps = 23/165 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCPERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRARC 165
>gi|444721192|gb|ELW61941.1| High mobility group protein B1 [Tupaia chinensis]
Length = 300
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 24/129 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ C EEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA +
Sbjct: 8 KPRGKMSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFKDMAKVN 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADV 112
+LG+ W +
Sbjct: 128 KLGEMWNNT 136
>gi|354485801|ref|XP_003505070.1| PREDICTED: high mobility group protein B1-like [Cricetulus griseus]
Length = 198
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 24/156 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKH + +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHLDFSVNFSEFSKKCSERWKTMSAKEKGKFEDMAKTD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y P GE R +IK + P +GD+AK
Sbjct: 68 KARYEREMKTYIPSKGETKRKFKDPNAPKRRPSAFFLFCSEYRPRIKGERPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W + + YE+ A K K ++EK + AY+
Sbjct: 128 KLGEMWNNTAAEDRQPYEKKAAKLKEKHEKGIAAYR 163
>gi|205780950|sp|B2RPK0.1|HGB1A_HUMAN RecName: Full=Putative high mobility group protein B1-like 1;
AltName: Full=High mobility group protein B1 pseudogene
1; AltName: Full=Putative high mobility group protein
1-like 1; Short=HMG-1L1
gi|187950665|gb|AAI37483.1| High-mobility group box 1-like 1 [Homo sapiens]
gi|187953577|gb|AAI37484.1| High-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 97/159 (61%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKH + +V F+EFS KC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K Y+ +M++Y PP GE + KIK ++P +GD+AK
Sbjct: 68 KTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K E+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKG 166
>gi|392883678|gb|AFM90671.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 100/165 (60%), Gaps = 23/165 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M +YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMFSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRARC 165
>gi|392881260|gb|AFM89462.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+ K++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVTKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|444721179|gb|ELW61931.1| High mobility group protein B1 [Tupaia chinensis]
Length = 212
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 24/166 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K + KPRG+M++YAFFVQ CREE KKKHP+ +V F+EFSK C+ER KTMS KEK +F
Sbjct: 1 MGKGEPKKPRGKMSSYAFFVQTCREEPKKKHPDASVNFSEFSKTCSERGKTMSAKEKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEY 96
+MA DK Y+ EM++Y PP GE R KIK ++P
Sbjct: 61 EDMAKVDKAGYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GDIAK+LG+ W + K YE+ A K K +YEK + AY+ +
Sbjct: 121 SMGDIAKKLGELWNNTAADGKQPYEKKAAKLKEKYEKNIAAYRAKG 166
>gi|444716453|gb|ELW57303.1| High mobility group protein B1 [Tupaia chinensis]
Length = 213
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 24/161 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKK HP+ +V F+EFSKKC+E WKTMS KEK +F +MA DK Y+
Sbjct: 1 MSSYAFFVQTCREEHKKMHPDASVNFSEFSKKCSESWKTMSAKEKGKFEDMAKVDKALYE 60
Query: 73 TEMQSYTPPAGEK-----------------------RGKIKQDNPEYGVGDIAKELGKKW 109
EM++Y PP GE R KI++ +P +GD+AK+L + W
Sbjct: 61 REMKTYIPPKGETKKFKDPNAPKRPPSAFFLFCSEYRPKIRE-HPGLSIGDVAKKLEEMW 119
Query: 110 ADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEA 150
++ K YE+ A K K +Y K++TA++ + A E+
Sbjct: 120 NNIAADGKQSYEKKAAKLKGKYRKDITAFQGKGTANAAEKG 160
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 26/158 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+ +AYAFFVQ CR+EHK+K P+ V F+EFSKKC+ERWK+++ +K +F +MA D
Sbjct: 8 KPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAG--------------------------EKRGKIKQDNPEYGVGDI 101
K RYD EM++Y PP G E R +K ++P +G+I
Sbjct: 68 KVRYDREMKTYVPPKGVGKTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEI 127
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
AK+LG+ W+ + +EQ A K + +YEKE+ AY+
Sbjct: 128 AKKLGELWSKQSSKDRAPFEQKAGKLREKYEKEVAAYR 165
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 95/158 (60%), Gaps = 26/158 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+ +AYAFFVQ CR+EHK+K P+ V F+EFSKKC+ERWK+++ +K +F +MA D
Sbjct: 8 KPKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAG--------------------------EKRGKIKQDNPEYGVGDI 101
K RYD EM++Y PP G E R +K ++P +G+I
Sbjct: 68 KVRYDREMKTYVPPKGVGKTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEI 127
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
AK+LG+ W+ + +EQ A K + +YEKE+ AY+
Sbjct: 128 AKKLGELWSKQSSKDRAPFEQKAGKLREKYEKEVAAYR 165
>gi|392876068|gb|AFM86866.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RY EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYGREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|20138433|sp|Q9UGV6.1|HMGLX_HUMAN RecName: Full=Putative high mobility group protein 1-like 10;
Short=HMG-1L10
Length = 211
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 96/159 (60%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M+++AFF Q CRE HKKKHP+ +V +EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSHAFFGQTCREAHKKKHPDASVNLSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K Y+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 68 KAHYEREMKTYIPPKGETKKKFKDPNAPKRTPSAFFLFCSAYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 166
>gi|444510285|gb|ELV09567.1| High mobility group protein B3 [Tupaia chinensis]
Length = 197
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 84/138 (60%), Gaps = 22/138 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 1 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 60
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP +GD+AK+LG+ W
Sbjct: 61 REMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWN 120
Query: 111 DVDPSVKTKYEQMAEKDK 128
++ S K Y A K K
Sbjct: 121 NLSDSEKQPYITKAAKLK 138
>gi|201066437|gb|ACH92570.1| high-mobility group protein 1-like 1 (predicted) [Otolemur
garnettii]
Length = 210
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 97/158 (61%), Gaps = 23/158 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM++ AFFVQ C EEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA +
Sbjct: 8 KPRGRMSSSAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAE 67
Query: 68 KKRYDTEMQSYTPPAGEKR-----------------------GKIKQDNPEYGVGDIAKE 104
K Y+ EM++Y PP GE + KIK+++P +G++AK+
Sbjct: 68 KAIYEREMKTYIPPKGETKKNFKDPNASKPPSAFFLFCSEYLPKIKREHPGLSIGEVAKK 127
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG W + K E+ A K K +YEK++ AY+ +
Sbjct: 128 LGMMWTNTAVGDKQPEEKKAAKLKEKYEKDIAAYRAKG 165
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus norvegicus]
Length = 212
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 89/150 (59%), Gaps = 22/150 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHK K+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RY
Sbjct: 27 MSAYAFFVQTCREEHKTKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYG 86
Query: 73 TEMQSY----------------TPPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y PP+G E R KIK NP + D+ K+LG+ W
Sbjct: 87 REMKDYESAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIEDVVKKLGEMWN 146
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
++ S K Y A K K +YEK++ YK+
Sbjct: 147 NLSDSEKQPYMTKAAKLKEKYEKDVADYKS 176
>gi|392873904|gb|AFM85784.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 100/165 (60%), Gaps = 23/165 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GD+AK++G+ W+ + K YE+ + K + EKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKCEKEVAAYRARC 165
>gi|392878832|gb|AFM88248.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+ ++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKTSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
+A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EGLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|392876622|gb|AFM87143.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V +EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDSSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|392883818|gb|AFM90741.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 100/165 (60%), Gaps = 23/165 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM+ Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRIYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIF 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+GD+AK++G+ W+ + + YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDEKPYEERGAQLKEKYEKEVAAYRARC 165
>gi|444732714|gb|ELW72989.1| Enkurin [Tupaia chinensis]
Length = 362
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 94/155 (60%), Gaps = 24/155 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ C EE KKKH + +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCWEEPKKKHADASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE R KIK ++P +GD AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKSKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDAAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W + K YE+ A K K +YEK++ AY
Sbjct: 128 KLGEMWNNTAADEKQPYEKKAAKLKEKYEKDIAAY 162
>gi|339250984|ref|XP_003372975.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316969210|gb|EFV53345.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 599
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 26/151 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTM+++EK+RF+E+A KD
Sbjct: 7 KPRGKTSPYGFFVKMCYEEHKKKYPSENVQVTEISKKCSEKWKTMTQQEKQRFYELAQKD 66
Query: 68 KKRYDTEMQSYTP-------------PAGEKRG-------------KIKQDNPEYGVGDI 101
++RY E+ ++ P KR ++++ +P++ VG +
Sbjct: 67 RERYQAEVAAFGGEDALRKRKRNKKDPNAPKRALSAFFFFSHAERPEVQKSHPDWKVGQL 126
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
A+ELG+ W ++ K KYE+MA KDKARYE
Sbjct: 127 AQELGRMWKALNDEQKRKYEEMAIKDKARYE 157
>gi|444516994|gb|ELV11325.1| High mobility group protein B1 [Tupaia chinensis]
Length = 201
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 92/151 (60%), Gaps = 24/151 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA DK R +
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARNE 60
Query: 73 TEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP GE R KIK ++P +GD+AK+L
Sbjct: 61 REMKTYVPPKGETRKKFKDPNASKRPPLAFFLFCSEYHPKIKGEHPGLSIGDVAKKLRDM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
W + K YE+ A K K +YEK++ AY+
Sbjct: 121 WNNTAADDKQPYEKKAAKLKEKYEKDIAAYR 151
>gi|351708060|gb|EHB10979.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 241
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 93/158 (58%), Gaps = 23/158 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M+++AFFVQ CREEHKKKHP V F+EFSKKC+ERWKTM KEK +F +M D
Sbjct: 8 KLRGKMSSHAFFVQTCREEHKKKHPNAFVNFSEFSKKCSERWKTMFAKEKGKFEDMTKAD 67
Query: 68 KKRYDTEMQSYTPP-----------------------AGEKRGKIKQDNPEYGVGDIAKE 104
K Y+ EM++Y PP E KIK + P +GD+AK+
Sbjct: 68 KAHYEREMKTYIPPKEETKKFKDPNAPKRLPSAFFLFCSEYHPKIKGEYPGLSIGDVAKK 127
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG+ W + K Y++ A K K +YEK++TAY+ +
Sbjct: 128 LGEIWNNTAADDKQPYKKKAAKLKEKYEKDITAYQAKG 165
>gi|444513275|gb|ELV10301.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 98/162 (60%), Gaps = 25/162 (15%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K KPRG+M++ AFFVQ +EEHKK HP+ +V F+EFSKKC+ERWKTMS KEK +F
Sbjct: 1 MGKGNPEKPRGKMSSNAFFVQTFQEEHKK-HPDASVNFSEFSKKCSERWKTMSAKEKGKF 59
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEY 96
+MA DK RY+ EM++Y PP GE R +IK ++P
Sbjct: 60 EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPLLAFFLFCSEYRPQIKGEHPGL 119
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+GD+AK+LG+ W + K YE+ A K K +YEK++ AY
Sbjct: 120 SIGDVAKKLGEMWNNTAADGKQPYEKKAAKLKEKYEKDIAAY 161
>gi|444708344|gb|ELW49421.1| High mobility group protein B1 [Tupaia chinensis]
Length = 302
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 95/158 (60%), Gaps = 23/158 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ C+EEHKK+HP +V F+EFSKKC+ERWK MS K+K +F + A D
Sbjct: 8 KPRGKMSSYAFFVQTCQEEHKKEHPGVSVNFSEFSKKCSERWKIMSAKKKGKFEDTAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN-----------------------PEYGVGDIAKE 104
K Y+ E+++Y PP GE + K K N P +GD+AK+
Sbjct: 68 KVHYEREIKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSDYRPKIKEHPGLSIGDVAKK 127
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 LGEMWNNTATDDKQPYEKKAAKLKEKYEKDIAAYQAKG 165
>gi|392876202|gb|AFM86933.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 23/164 (14%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +PRG+M++YAFFVQ REEHKKKHP+ +V F+EFSK+ +ERWK M+ K+K +F
Sbjct: 1 MGKRDPRQPRGKMSSYAFFVQNSREEHKKKHPDSSVDFSEFSKQRSERWKAMTPKDKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYT-----------------PPAG------EKRGKIKQDNPEYG 97
++A DK RYD EM++Y PP+ + R +I+ +NP
Sbjct: 61 EDLAKNDKVRYDREMRNYNPPKGDKKKKKDPNAPKRPPSAFFIFCSDHRPRIRGENPGIS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+GD+AK++G+ W+ + K YE+ + K +YEKE+ AY+ R
Sbjct: 121 IGDVAKKMGELWSGLTAKDKKPYEERGAQLKEKYEKEVAAYRAR 164
>gi|440911425|gb|ELR61099.1| High mobility group protein B3, partial [Bos grunniens mutus]
Length = 192
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 93/156 (59%), Gaps = 22/156 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M AYAFFVQ+CREEHKKK+ E V FAEFSKKC+ERWKTMS KEK +F EMA
Sbjct: 10 KPKGKMCAYAFFVQMCREEHKKKNSEVPVNFAEFSKKCSERWKTMSRKEKSKFDEMAKVY 69
Query: 68 KKRYDTEMQSYTPPAGEKR---------------------GKIKQDNPEYGVGDIAKELG 106
K YD EM+ Y P G K+ KIK +P + D+AK+LG
Sbjct: 70 KMHYDQEMKDYGPARGGKKKDPKAPKRLPSGCLLFCSEFHPKIKSTHPGISIRDVAKKLG 129
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ W ++ S K Y A K K +YEK++ +K+R
Sbjct: 130 EMWNNLSDSEKQPYINKAAKLK-KYEKDVADHKSRG 164
>gi|444722397|gb|ELW63094.1| High mobility group protein B1 [Tupaia chinensis]
Length = 178
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 98/160 (61%), Gaps = 26/160 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVV-FAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KPRG+M++YAFFVQ C+EEHKK HP+ +V F+EFSKKC+ERWKTMS KEK +F +MA
Sbjct: 8 KPRGKMSSYAFFVQTCQEEHKK-HPDASVNNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 66
Query: 67 DKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIA 102
DK Y+ EM++Y PP GE R KIK + P +GD+A
Sbjct: 67 DKAPYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEPPGLSIGDVA 126
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ W + K YE+ A K K +Y+K++ AY+ +
Sbjct: 127 KKLGEMWNNTAADDKQPYEKKAAKLKEKYDKDIAAYRAKG 166
>gi|440896783|gb|ELR48616.1| High mobility group protein B1, partial [Bos grunniens mutus]
Length = 165
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 92/151 (60%), Gaps = 23/151 (15%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+M +YAFFVQ C+EEH+KKH + +V F+EFSKKC+ERWKTMS K++F EM DK
Sbjct: 1 RGKMLSYAFFVQTCQEEHRKKHRDVSVNFSEFSKKCSERWKTMSATAKRKFEEMKKADKA 60
Query: 70 RYDTEMQSYTPPAGEKR-----------------------GKIKQDNPEYGVGDIAKELG 106
RY+ EM++Y PP GE + K+K D+P +GD+AK+LG
Sbjct: 61 RYEREMKTYIPPKGETKKFKDPSTPKRDPSAFFLFCSEYCPKVKHDHPGLSIGDVAKKLG 120
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
+ W + K YE+ A K K +YEK++ A
Sbjct: 121 ETWNNTAADDKQPYEKKAAKLKEKYEKDIAA 151
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+ +K+ ++W + + K K+E+M + DKARYE+EM Y
Sbjct: 28 NFSEFSKKCSERWKTMSATAKRKFEEMKKADKARYEREMKTY 69
>gi|195167323|ref|XP_002024483.1| GL15829 [Drosophila persimilis]
gi|194107881|gb|EDW29924.1| GL15829 [Drosophila persimilis]
Length = 173
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 77/119 (64%), Gaps = 30/119 (25%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAG---------------------------- 83
M +KEKKRFHEMA+KDK+RY+ EMQ+Y PP G
Sbjct: 1 MVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGTVVGRGKKRKQIKDPNAPKRSLSAFFWF 60
Query: 84 --EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
++R K+K NPEYGVGDIAKELG+KW+DVDP VK KYE MAE+DKARYE+EMT YK
Sbjct: 61 CNDERNKVKALNPEYGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKT 119
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F R + K +PE V + +K+ +W + + K+++ MA++DK
Sbjct: 50 PKRSLSAFFWFCNDERNKVKALNPEYGV--GDIAKELGRKWSDVDPEVKQKYESMAERDK 107
Query: 69 KRYDTEMQSYTPPAGEKRGKIKQDNP 94
RY+ EM Y + GKI P
Sbjct: 108 ARYEREMTEY-----KTSGKIAMSAP 128
>gi|395821450|ref|XP_003784053.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 221
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 83/129 (64%), Gaps = 24/129 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAF VQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFSVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM+++ PP GE R KIK ++P +G++AK
Sbjct: 68 KARYEREMKTHIPPKGETKKKFKDPNVPKRPPSAFFLFCSEYRPKIKGEHPGLSIGEVAK 127
Query: 104 ELGKKWADV 112
+LG+ W++
Sbjct: 128 KLGEMWSNT 136
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGGPKKLRGKMSSYAFSVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM +
Sbjct: 61 EDMAKADKARYEREMKTH 78
>gi|332847763|ref|XP_003315517.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan troglodytes]
gi|397485725|ref|XP_003813991.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 207
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 21/151 (13%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+P+ V FAEFSKKC+ERWKTMS+KEK +F+E+A DK YD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPKVPVNFAEFSKKCSERWKTMSKKEKSKFNELAKADKVHYD 72
Query: 73 TEMQSYTPPAGEKR---------------------GKIKQDNPEYGVGDIAKELGKKWAD 111
E++ Y P G K+ K K NP +GD+AK+L + W +
Sbjct: 73 QEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIGDVAKKLSEMWKN 132
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y A K K +YEK++ K++
Sbjct: 133 LNDSEKQPYITQAAKLKEKYEKDVAVCKSKG 163
>gi|444729656|gb|ELW70065.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ C+EEHKKKHP+ +V F+E KKC+ERWKTMS KEK +F +MA DK RY+
Sbjct: 13 MSSYAFFVQTCQEEHKKKHPDASVNFSECVKKCSERWKTMSAKEKVKFEDMAKADKSRYE 72
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
EM++ PP GE KIK+++P+ +GD+AK+LG+
Sbjct: 73 REMKTNIPPKGETEKKFKDPNVPKRPPLAFFLFCSEYHPKIKEEHPDLSIGDVAKKLGEM 132
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
W + K YE+ A K K +YEK++ AY
Sbjct: 133 WNNTAADDKQPYEKAA-KLKEKYEKDIAAY 161
>gi|444725503|gb|ELW66067.1| Trem-like transcript 1 protein [Tupaia chinensis]
Length = 668
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/143 (46%), Positives = 81/143 (56%), Gaps = 22/143 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AY FFVQ CRE+HKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 510 MSAYTFFVQTCREKHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 569
Query: 73 TEMQSYTPP----------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y P E R KIK NP +GD+AK+LG+ W
Sbjct: 570 REMKDYGPAKGGKKKKDPNAPKRRPSVFFLFCSEFRLKIKSTNPGISIGDVAKKLGEMWN 629
Query: 111 DVDPSVKTKYEQMAEKDKARYEK 133
++ S K Y K A+ +
Sbjct: 630 NLSDSEKQPYITNGAKGPAKVAR 652
>gi|194666188|ref|XP_875720.3| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|297473608|ref|XP_002686711.1| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|296488702|tpg|DAA30815.1| TPA: high-mobility group box 2-like [Bos taurus]
Length = 283
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 88/147 (59%), Gaps = 24/147 (16%)
Query: 20 VQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYT 79
+ CREEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA DK RYD EM++Y
Sbjct: 94 INTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYV 153
Query: 80 ------------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWADVDPS 115
PP+ E R KIK ++P +GD AK+LG+ W++
Sbjct: 154 PPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAK 213
Query: 116 VKTKYEQMAEKDKARYEKEMTAYKNRS 142
K YEQ A K K +YEK++ AY+ +
Sbjct: 214 DKQPYEQKAAKLKEKYEKDIAAYRAKG 240
>gi|444729655|gb|ELW70064.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/150 (44%), Positives = 91/150 (60%), Gaps = 25/150 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ C+EEHKKKHP+ +V F+E KKC+ERWKTMS KEK +F +MA DK RY+
Sbjct: 13 MSSYAFFVQTCQEEHKKKHPDASVNFSECLKKCSERWKTMSAKEKVKFEDMAKADKSRYE 72
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
EM++ PP GE KIK+++P+ +GD+AK LG+
Sbjct: 73 REMKTNIPPKGETEKKFKDPNVPKRPPLAFFLFCSEYHPKIKEEHPDLSIGDVAKILGEM 132
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
W + K YE+ A K K +YEK++ AY
Sbjct: 133 WNNTAADDKQPYEKAA-KLKEKYEKDIAAY 161
>gi|90076282|dbj|BAE87821.1| unnamed protein product [Macaca fascicularis]
Length = 123
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 69/86 (80%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN 93
K RY+ EM++Y PP GE + K K N
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDPN 93
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|444518100|gb|ELV11958.1| High mobility group protein B1 [Tupaia chinensis]
Length = 162
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 94/155 (60%), Gaps = 24/155 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEH+KKHP+ V F+EFS+KC+ERWKTMS +EK + +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHRKKHPDALVDFSEFSQKCSERWKTMSAEEKGKLEDMAKVD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y P E R KIK ++P+ +GD+ K
Sbjct: 68 KARYEREMRTYIPSKGKTKGKFKGPNVPKRPPSAFFLFCSEYRPKIKGEHPDLSIGDVEK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W + K E+ A K K +YEK++ AY
Sbjct: 128 KLGEVWNNAAADDKQPCEKKAAKLKEKYEKDIAAY 162
>gi|148668459|gb|EDL00778.1| mCG116117 [Mus musculus]
Length = 244
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 81/129 (62%), Gaps = 24/129 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAIAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP E R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKRETKKKFKDPNAPKRPPSAFFLFCSGYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADV 112
+ G+ W +
Sbjct: 128 KRGEMWNNT 136
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA DKARYE+EM Y
Sbjct: 61 EDMAIADKARYEREMKTY 78
>gi|403267258|ref|XP_003925761.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Saimiri boliviensis boliviensis]
Length = 227
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 92/153 (60%), Gaps = 19/153 (12%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+++AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK + EM D
Sbjct: 61 KPKGKVSAYAFFVQTCREEHKKKNPEVPVSFAEFSKKCSERWKTMSRKEKSKSDEMMKVD 120
Query: 68 KKRYDTEMQSYT-------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKK 108
K RYD EM+ PP+G E KIK NP +GD+AK LG++
Sbjct: 121 KVRYDQEMKGAAKGGKKKDPDAPKRPPSGFFLFCSEFCPKIKSTNPGISIGDVAKRLGER 180
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
++ S K A K K R+E++ YK++
Sbjct: 181 RNNLSDSGKRPSITKAAKLKERHEEDGAEYKSK 213
>gi|32527711|gb|AAP86257.1| Ac2-008 [Rattus norvegicus]
Length = 234
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 68/83 (81%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 136 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 195
Query: 68 KKRYDTEMQSYTPPAGEKRGKIK 90
K RY+ EM++Y PP GE + K K
Sbjct: 196 KARYEREMKTYIPPKGETKKKFK 218
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 49 WKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELG 106
W T+ E+ + + M D K+ +M SY R + K+ +P+ V + +K+
Sbjct: 116 WATLCLAEENQLN-MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCS 174
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
++W + K K+E MA+ DKARYE+EM Y
Sbjct: 175 ERWKTMSAKEKGKFEDMAKADKARYEREMKTY 206
>gi|407262070|ref|XP_003945989.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 81/129 (62%), Gaps = 24/129 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAIAD 67
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP E R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIPPKRETKKKFKDPNAPKRPPSAFFLFCSGYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADV 112
+ G+ W +
Sbjct: 128 KRGEMWNNT 136
>gi|444707796|gb|ELW48970.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 93/159 (58%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ C E HKKK + +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSSYAFFVQTCWEGHKKKQLDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN------------------------PEYGVGDIAK 103
K RY+ EM++Y PP GE + K K N P + D+AK
Sbjct: 68 KARYEREMKTYIPPKGETKKKFKDSNAPKRPPLAFVLFCSEYCPKIKGEHPGLSISDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 KLGEMWNNTAADDKKPYEKKAAKVKEKYEKDIAAYRAKG 166
>gi|444706988|gb|ELW48300.1| High mobility group protein B2 [Tupaia chinensis]
Length = 154
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 88/150 (58%), Gaps = 24/150 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ C EEHKKKHP+ +V F EFSKKC+ERWKTMS K + +F + D+ RYD
Sbjct: 1 MSSYAFFVQTCWEEHKKKHPDSSVTFTEFSKKCSERWKTMSAKVRSKFEDSTKSDEARYD 60
Query: 73 TEMQSY--------------TPPAG----------EKRGKIKQDNPEYGVGDIAKELGKK 108
EM++Y P G E R KIK ++P +GD AK+LG+
Sbjct: 61 REMKNYFPPKGDKKGKKKDPNAPKGSLSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
W++ K YEQ A K K +Y+K++ AY
Sbjct: 121 WSEQSAKDKQPYEQKAAKLKEKYKKDIAAY 150
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 91/156 (58%), Gaps = 21/156 (13%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M AYAFFVQ CREEHKKK+PE V AEFSKKC+ERWK S KEK + EMA D
Sbjct: 175 KPKGKMPAYAFFVQTCREEHKKKNPEVPVNLAEFSKKCSERWKATSGKEKSKSDEMAKAD 234
Query: 68 KKRYDTEMQSY---------------TPPAG------EKRGKIKQDNPEYGVGDIAKELG 106
K D E++ Y TPP+G E R KIK NP +GD+AK+LG
Sbjct: 235 KVCCDREVKDYGPAKGGKKKDPNAPKTPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLG 294
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ W + S K Y A + K + EK++ YK++
Sbjct: 295 EMWNSLSDSEKQPYITKAAQLKEKDEKDVADYKSKG 330
>gi|351696237|gb|EHA99155.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 201
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 23/153 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK MS KEK +F +M DK RY+
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKIMSAKEKGKFEDMVKADKARYE 60
Query: 73 TEMQSYTPPAGEK-----------------------RGKIKQDNPEYGVGDIAKELGKKW 109
EM++Y PP GE R KIK ++P +GD+ K+LG+
Sbjct: 61 REMKTYIPPKGETKKKFKDPNAPKRPPSAFLFCSEYRPKIKGEHPGLSIGDVVKKLGEMR 120
Query: 110 ADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ K YE+ A K K +YE+++ AY+ +
Sbjct: 121 NNTAADDKQPYEKKAAKLKEKYEEDIAAYRAKG 153
>gi|341879743|gb|EGT35678.1| CBN-HMG-1.2 protein [Caenorhabditis brenneri]
Length = 235
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 91/157 (57%), Gaps = 26/157 (16%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTM + EK+RF+E+A KD +
Sbjct: 48 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAE 107
Query: 70 RYDTEMQSYT--------------PPA------------GEKRGKIKQDNPEYGVGDIAK 103
RY E+ +Y P A +KR +I+ +P++ VG +A+
Sbjct: 108 RYQAEVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQSAHPDWKVGQVAQ 167
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
ELGK W V +K YE A+ DK RY EM YK+
Sbjct: 168 ELGKMWKQVSQELKDSYEAKAQADKDRYADEMRNYKS 204
>gi|444730910|gb|ELW71281.1| High mobility group protein B2 [Tupaia chinensis]
Length = 153
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 81/142 (57%), Gaps = 23/142 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ ++YAFFVQ CREEHKKK P +V F EF KKC+ERWKTMS KEK +F MA
Sbjct: 8 KPRGKTSSYAFFVQTCREEHKKKDPNSSVNFTEFFKKCSERWKTMSAKEKSKFEGMAKSG 67
Query: 68 KKRYDTEMQSYT------------------PPA-----GEKRGKIKQDNPEYGVGDIAKE 104
K YD E +Y PP+ E R KIK D+P +GDIAK+
Sbjct: 68 KAPYDREKNNYVPPKGDKKGKKKDPNALNRPPSDFLLCSEHRPKIKSDHPVLSIGDIAKK 127
Query: 105 LGKKWADVDPSVKTKYEQMAEK 126
LG+ W++ K YEQ A K
Sbjct: 128 LGEMWSEQSAKDKQPYEQKAAK 149
>gi|119623033|gb|EAX02628.1| hCG1644442 [Homo sapiens]
Length = 201
Score = 118 bits (296), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 89/156 (57%), Gaps = 21/156 (13%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYAFF Q CREEHKKK+PE V F EFSKKC+E+ KTMS KEK +F EMA D
Sbjct: 8 KPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMAKVD 67
Query: 68 KKRYDTEMQSYTPPAGEKR---------------------GKIKQDNPEYGVGDIAKELG 106
K YD EM+ P G K+ KIK NP +GD+AK+LG
Sbjct: 68 KVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLG 127
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ W + K Y A K +YEK++ YK++
Sbjct: 128 EMWINYSDREKQPYITKAADLKEKYEKDVADYKSKG 163
>gi|344253440|gb|EGW09544.1| High mobility group protein B1 [Cricetulus griseus]
Length = 169
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 94/158 (59%), Gaps = 23/158 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ C EEHKKKHP+ +V F+E KKC+ERWKTMS KEK +F +MA
Sbjct: 8 KLRGKMSSYAFFVQTCWEEHKKKHPDASVNFSELLKKCSERWKTMSAKEKGKFEDMAKAG 67
Query: 68 KKRYDTEMQSYTPPAGEKR-----------------------GKIKQDNPEYGVGDIAKE 104
K Y+ EM++Y P K+ KIK ++P +GD+AK+
Sbjct: 68 KAHYEREMKTYIPKGETKKKFKDSNAPKRPPSAFFLFCSEYCPKIKGEHPGLSLGDVAKK 127
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG+KW + K YE+ A K K +YEK++ AY+ +
Sbjct: 128 LGEKWNNTAAGDKQPYEKKAAKLKEKYEKDIVAYRAKG 165
>gi|432104603|gb|ELK31215.1| High mobility group protein B1 [Myotis davidii]
Length = 201
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+ ++ AFFVQ +EHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKTSSCAFFVQTYWDEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRG------------------------KIKQDNPEYGVGDIAK 103
K RY EM++Y PP GE + KIK ++P +GDIA+
Sbjct: 68 KARYKREMKTYIPPKGETKNTFKDPNEPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDIAE 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K +E+ A K K +YEK++ A++ +
Sbjct: 128 KLGEMWNNTAADDKQPHEKKAAKLKEKYEKDIAAHRAKG 166
>gi|397502952|ref|XP_003822100.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
gi|410056873|ref|XP_003317692.2| PREDICTED: high mobility group protein B3-like [Pan troglodytes]
Length = 221
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 89/156 (57%), Gaps = 21/156 (13%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYAFF Q CREEHKKK+PE V F EFSKKC+E+ KTMS KEK +F EMA D
Sbjct: 28 KPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKFDEMAKVD 87
Query: 68 KKRYDTEMQSYTPPAGEKR---------------------GKIKQDNPEYGVGDIAKELG 106
K YD EM+ P G K+ KIK NP +GD+AK+LG
Sbjct: 88 KVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIGDMAKKLG 147
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ W + K Y A K +YEK++ YK++
Sbjct: 148 EMWINYSDREKQPYITKAADLKEKYEKDVADYKSKG 183
>gi|148680808|gb|EDL12755.1| mCG1036273 [Mus musculus]
Length = 105
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 68/86 (79%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKTD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN 93
K Y+ EM++Y PP GE + K K N
Sbjct: 68 KAHYEREMKTYIPPKGEIKKKFKDPN 93
>gi|71986275|ref|NP_001022600.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
gi|373219054|emb|CCD83371.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
Length = 233
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 26/156 (16%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTM + EK+RF+E+A KD +
Sbjct: 46 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAE 105
Query: 70 RYDTEMQSYT--------------PPA------------GEKRGKIKQDNPEYGVGDIAK 103
RY E+ +Y P A +KR +I+ +P++ VG +A+
Sbjct: 106 RYQAEVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQ 165
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
ELGK W V K YEQ A+ DK RY EM YK
Sbjct: 166 ELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 201
>gi|170591488|ref|XP_001900502.1| High mobility group protein 1.2 [Brugia malayi]
gi|158592114|gb|EDP30716.1| High mobility group protein 1.2, putative [Brugia malayi]
Length = 235
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 26/164 (15%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTMS+ EK+RF E+A KD +
Sbjct: 28 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAE 87
Query: 70 RYDTEMQSYT--------------PPA------------GEKRGKIKQDNPEYGVGDIAK 103
RY E+ +Y P A +KR +++Q +PE+ VG +A+
Sbjct: 88 RYQAEVAAYGGEDALRKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQ 147
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
ELG+ W + + YE+ A +DK RY +EM YK V +
Sbjct: 148 ELGRFWKALGEEERAVYERKALEDKERYAEEMRNYKGTPVQTIT 191
>gi|344254860|gb|EGW10964.1| High mobility group protein B1 [Cricetulus griseus]
Length = 186
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 91/151 (60%), Gaps = 24/151 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKKKH + +V F+EFSKKC+ERWKTMS KEK +F +MA DK RY+
Sbjct: 1 MSSYAFFVQTCREEHKKKHLDFSVNFSEFSKKCSERWKTMSAKEKGKFEDMAKTDKARYE 60
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
EM++Y P GE R +IK + P +GD+AK+LG+
Sbjct: 61 REMKTYIPSKGETKRKFKDPNAPKRRPSAFFLFCSEYRPRIKGERPGLSIGDVAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
W + + YE+ A K K ++EK + AY+
Sbjct: 121 WNNTAAEDRQPYEKKAAKLKEKHEKGIAAYR 151
>gi|410562530|pdb|2LY4|A Chain A, Hmgb1-Facilitated P53 Dna Binding Occurs Via Hmg-BoxP53
Transactivation Domain Interaction And Is Regulated By
The Acidic Tail
Length = 83
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 65/77 (84%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 7 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66
Query: 68 KKRYDTEMQSYTPPAGE 84
K RY+ EM++Y PP GE
Sbjct: 67 KARYEREMKTYIPPKGE 83
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 67 DKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQMA 124
D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+E MA
Sbjct: 4 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
Query: 125 EKDKARYEKEMTAY 138
+ DKARYE+EM Y
Sbjct: 64 KADKARYEREMKTY 77
>gi|25395797|pir||E88479 protein F47D12.4 [imported] - Caenorhabditis elegans
Length = 202
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 26/156 (16%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTM + EK+RF+E+A KD +
Sbjct: 15 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAE 74
Query: 70 RYDTEMQSYT--------------PPA------------GEKRGKIKQDNPEYGVGDIAK 103
RY E+ +Y P A +KR +I+ +P++ VG +A+
Sbjct: 75 RYQAEVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQ 134
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
ELGK W V K YEQ A+ DK RY EM YK
Sbjct: 135 ELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 170
>gi|312075672|ref|XP_003140521.1| high mobility group protein 1.2 [Loa loa]
gi|307764316|gb|EFO23550.1| high mobility group protein 1.2 [Loa loa]
Length = 211
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 26/164 (15%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTMS+ EK+RF E+A KD +
Sbjct: 10 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAE 69
Query: 70 RYDTEMQSYT--------------PPA------------GEKRGKIKQDNPEYGVGDIAK 103
RY E+ +Y P A +KR +++Q +PE+ VG +A+
Sbjct: 70 RYQAEVAAYGGEDALRKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQ 129
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
ELG+ W + + YE+ A +DK RY +EM YK V +
Sbjct: 130 ELGRFWKALGEEERAVYERKALEDKERYAEEMRNYKGTPVQTIT 173
>gi|332245567|ref|XP_003271930.1| PREDICTED: high mobility group protein B3 [Nomascus leucogenys]
Length = 177
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
EM+ Y PA + K + P+ K+LG+ W +++ S K Y A K K +YE
Sbjct: 73 REMKDYG-PAKGGKKKKDPNAPKRPPWRRGKKLGEMWNNLNDSEKQPYITKAAKLKEKYE 131
Query: 133 KEMTAYKNRS 142
K++ YK++
Sbjct: 132 KDVADYKSKG 141
>gi|268571579|ref|XP_002641089.1| C. briggsae CBR-HMG-1.2 protein [Caenorhabditis briggsae]
Length = 239
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 94/174 (54%), Gaps = 28/174 (16%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTM + EK+RF+E+A KD +
Sbjct: 48 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAE 107
Query: 70 RYDTE----------------------------MQSYTPPAGEKRGKIKQDNPEYGVGDI 101
RY E + ++ + +KR +I+ +P++ VG +
Sbjct: 108 RYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQGQHPDWKVGQV 167
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEADEEDD 155
A+ELGK W V K YE A+ DK RY +EM YK AD EDD
Sbjct: 168 AQELGKMWKLVPQETKDAYETKAQADKDRYAEEMRHYKQEMTKMSGGIADYEDD 221
>gi|195977121|gb|ACG63669.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
Length = 227
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/159 (43%), Positives = 96/159 (60%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCR-EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KPRG+M++ AFFVQ CR EE +KKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA
Sbjct: 8 KPRGKMSSCAFFVQTCRGEEREKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 67
Query: 67 DKKRYDTEMQSYTPPAGEKRGKIKQDN-------------PEY----------GVGDIAK 103
DK RY+ EM++Y PP GE + K K N EY GD+AK
Sbjct: 68 DKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHHLSTGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W++ K E+ A K + + +K++ AY+ +
Sbjct: 128 KLGEMWSNPAAGDKQPEEKKAAKLEEKDKKDIAAYRAKG 166
>gi|355757722|gb|EHH61247.1| hypothetical protein EGM_19210, partial [Macaca fascicularis]
Length = 185
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 91/157 (57%), Gaps = 29/157 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K +G+++AYAFFVQ+CREEHKKK+PE V FAEFSKKC+ RWKTMS KEK +F E+A D
Sbjct: 8 KLKGKVSAYAFFVQMCREEHKKKYPEVPVNFAEFSKKCSRRWKTMSRKEKSKFDELAKTD 67
Query: 68 KKRYDTEMQSYTPPAGEKR----------------------GKIKQDNPEYGVGDIAKEL 105
K YD EM+ Y P G K+ KIK NP +GD+ K+L
Sbjct: 68 KVHYDQEMKDYGPAKGGKKKNDSNTFKRPPSGFFLFCSEFHPKIKSTNPGISIGDVTKKL 127
Query: 106 GKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
G +++ K Y A K K YEK++ YK++
Sbjct: 128 G----EIE---KQPYIIKAAKLKEEYEKDVAEYKSKG 157
>gi|440912073|gb|ELR61675.1| Putative high mobility group protein B3-like protein, partial [Bos
grunniens mutus]
Length = 190
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 92/154 (59%), Gaps = 23/154 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+A+AFFVQ+CR++HKK P+ V FAEFSKKC+ERWKTMS KEK F EMA D
Sbjct: 8 KPKGKMSAHAFFVQMCRKKHKK-TPKVPVNFAEFSKKCSERWKTMSGKEKSTFDEMAKAD 66
Query: 68 KKRYDTEMQSYT---------------PPAG------EKRGKIKQDNPEYGVGDIAKELG 106
K Y+ EM+ Y PP+G E KIK NP +GD+AK+LG
Sbjct: 67 KVHYNQEMKDYGSAKGGKKKDPNAPKRPPSGFFLFFSEFCSKIKSTNPGISIGDVAKKLG 126
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+ W ++ S K Y K K +YEK++ YK
Sbjct: 127 EMWNNLSDSKKQLYINKDAKLK-KYEKDVADYKG 159
>gi|324526583|gb|ADY48692.1| High mobility group protein 1.2, partial [Ascaris suum]
Length = 248
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 92/156 (58%), Gaps = 26/156 (16%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTMS+ EK+RF E+A KD +
Sbjct: 50 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAE 109
Query: 70 RYDTEMQSYT--------------PPA------------GEKRGKIKQDNPEYGVGDIAK 103
RY E+ +Y P A +KR +++Q +PE+ VG +A+
Sbjct: 110 RYQAEVAAYGGEDMLRKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQ 169
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
ELG+ W + + YE+ A +DK RY +EM YK
Sbjct: 170 ELGRYWKALSDEERMVYERKALEDKERYAEEMRNYK 205
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ FF R E +++HPE V + +++ WK +S++E+ + A +DK
Sbjct: 137 PKRALSAFFFFSHDKRPEVQQQHPEWKV--GQVAQELGRYWKALSDEERMVYERKALEDK 194
Query: 69 KRYDTEMQSYTPP 81
+RY EM++Y P
Sbjct: 195 ERYAEEMRNYKQP 207
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 90/152 (59%), Gaps = 22/152 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ C+EEHKKK+P+ V FAEFSKKC+ERWKTMS KEK +F EMA DK +D
Sbjct: 32 MSAYAFFVQTCKEEHKKKNPKVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKVDKVCHD 91
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ PP+G E R KIK P +GD+AK+LG+ W
Sbjct: 92 QEMKDCGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTKPGITIGDVAKKLGEMWN 151
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ S K Y K K ++EK++ YK++
Sbjct: 152 NLSDSEKQPYITKVAKLKEKHEKDVADYKSKG 183
>gi|90103305|gb|ABD85497.1| high mobility group box 1-like [Ictalurus punctatus]
Length = 182
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 88/148 (59%), Gaps = 24/148 (16%)
Query: 21 QVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTP 80
Q CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA DK RY+ EM++Y P
Sbjct: 1 QTCREEHKKKHPDTSVNFSEFSKKCSERWKTMSAKEKGKFEDMARLDKARYEREMKNYVP 60
Query: 81 PAGEK------------------------RGKIKQDNPEYGVGDIAKELGKKWADVDPSV 116
P GEK R K+K++ P +GD+AK+LG+ W
Sbjct: 61 PRGEKKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLSIGDVAKKLGEMWNKTSAEE 120
Query: 117 KTKYEQMAEKDKARYEKEMTAYKNRSVA 144
K YE+ A K K +YEK++ AY+ V
Sbjct: 121 KQPYEKKAAKLKEKYEKDIAAYRKGKVV 148
>gi|308499102|ref|XP_003111737.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
gi|308239646|gb|EFO83598.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
Length = 238
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 28/159 (17%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTM + EK+RF+E+A KD +
Sbjct: 48 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAE 107
Query: 70 RYDTE----------------------------MQSYTPPAGEKRGKIKQDNPEYGVGDI 101
RY E + ++ + +KR +I+ +P++ VG +
Sbjct: 108 RYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQSAHPDWKVGQV 167
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
A+ELGK W V K YEQ A+ DK RY +EM YK+
Sbjct: 168 AQELGKMWKLVPQETKDLYEQKAQADKDRYAEEMRHYKS 206
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ F+ Q R E + HP+ V + +++ + WK + ++ K + + A DK
Sbjct: 137 PKRALSAFFFYSQDKRPEIQSAHPDWKV--GQVAQELGKMWKLVPQETKDLYEQKAQADK 194
Query: 69 KRYDTEMQSY 78
RY EM+ Y
Sbjct: 195 DRYAEEMRHY 204
>gi|355782652|gb|EHH64573.1| hypothetical protein EGM_17820, partial [Macaca fascicularis]
Length = 159
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 83/135 (61%), Gaps = 19/135 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYAFFVQ CRE HKKK+PE +V FAEFSKKC+ERW TM KEK +F +
Sbjct: 8 KPKGKMSAYAFFVQTCREAHKKKNPEVSVNFAEFSKKCSERWTTMPGKEKSKFLFCS--- 64
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKD 127
E R KIK NP +GD+AK+LG+ W +++ S K Y A K
Sbjct: 65 ----------------EFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKL 108
Query: 128 KARYEKEMTAYKNRS 142
K +YEK++ YK++
Sbjct: 109 KEKYEKDVADYKSKG 123
>gi|148703464|gb|EDL35411.1| mCG50005 [Mus musculus]
Length = 206
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 94/159 (59%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA FV+ C EEHKKKHP+ +V F+ FSKKC+ERW TMS KEK +F MA D
Sbjct: 8 KPRGKMSSYALFVKTCWEEHKKKHPDASVNFSGFSKKCSERWNTMSAKEKGKFEGMAKAD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RY+ EM++Y P E R KIK ++P +GD+AK
Sbjct: 68 KARYEREMKTYIAPKGKTKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +Y+K++ AY+ +
Sbjct: 128 KLGEMWNNTAAKDKQPYEKKAAKLKEKYKKDIAAYRAKG 166
>gi|444518140|gb|ELV11977.1| High mobility group protein B3 [Tupaia chinensis]
Length = 198
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 88/154 (57%), Gaps = 25/154 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKK +ERWKT+S KEK + EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKRSERWKTVSGKEKWKLDEMAKADKVRYD 72
Query: 73 TEMQSYTPPAG------------------------EKRGKIKQDNPEYGVGDIAKELGKK 108
EM+ Y P G E R KIK NP +GD+AK+LG
Sbjct: 73 REMKDYGPAKGGEEEKGKDPNAPKRRPSVFFLFCSEFRLKIKSTNPGISIGDVAKKLGDV 132
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W ++ S K Y A K K +YEK++ K++
Sbjct: 133 WNNLSDSEKQPYITKAAKLK-KYEKDVADSKSKG 165
>gi|296470699|tpg|DAA12814.1| TPA: high mobility group box 3-like [Bos taurus]
Length = 197
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 92/153 (60%), Gaps = 22/153 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+A+AFFVQ+CR++HKK P+ V FAEFSKKC+ERWKTMS KEK F EMA D
Sbjct: 8 KPKGKMSAHAFFVQMCRKKHKKT-PKVPVNFAEFSKKCSERWKTMSGKEKSTFDEMAKAD 66
Query: 68 KKRYDTEMQSYT--------------PPAG------EKRGKIKQDNPEYGVGDIAKELGK 107
K Y+ EM+ Y PP+G E +IK NP +GD+AK+LG+
Sbjct: 67 KVHYNQEMKDYGSAKGGKKDPNAPKRPPSGFFLFFSEFCSEIKSTNPGISIGDVAKKLGE 126
Query: 108 KWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
W ++ S K Y K K +YEK++ YK
Sbjct: 127 MWNNLSDSKKQLYVNKDAKLK-KYEKDVADYKG 158
>gi|349804477|gb|AEQ17711.1| putative high mobility group protein-1 [Hymenochirus curtipes]
Length = 143
Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 82/127 (64%), Gaps = 24/127 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKK HP+ +V F+EFSKKC+ERWKTMSE K +F +MA D
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKK-HPDASVNFSEFSKKCSERWKTMSEG-KSKFEDMAKAD 65
Query: 68 KKRYDTEMQSYTPPAGEKRGK----------------------IKQDNPEYGVGDIAKEL 105
K RY+ EM++Y PP GE + K IK ++P +GD+AK+L
Sbjct: 66 KVRYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSDFRIKGEHPGLTIGDVAKKL 125
Query: 106 GKKWADV 112
G+ W +
Sbjct: 126 GEMWNNT 132
>gi|296221849|ref|XP_002756934.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 203
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 94/160 (58%), Gaps = 28/160 (17%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+ PRG+M++YAF VQ C+EEHKK+ P+ + EFSK C+ERWKTMS KEK +F +MA
Sbjct: 8 ILPRGKMSSYAFLVQTCQEEHKKQQPDAS----EFSKTCSERWKTMSAKEKGKFEDMAKA 63
Query: 67 DKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIA 102
DK Y+ EM++Y PP GE R KIK ++P +GD+A
Sbjct: 64 DKAHYEREMKTYIPPKGETKKKFKDRNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVA 123
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
K+LG+ W++ K YE+ A K K + EK++ AY+ +
Sbjct: 124 KKLGEMWSNTAADDKQPYEKKAAKLKEKCEKDIAAYRAKG 163
>gi|17553928|ref|NP_498375.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
gi|21903502|sp|Q09390.2|HMG12_CAEEL RecName: Full=High mobility group protein 1.2
gi|3702828|gb|AAC78599.1| high mobility group protein 1.2 [Caenorhabditis elegans]
gi|373219052|emb|CCD83369.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
Length = 235
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 28/158 (17%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTM + EK+RF+E+A KD +
Sbjct: 46 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAE 105
Query: 70 RYDTE----------------------------MQSYTPPAGEKRGKIKQDNPEYGVGDI 101
RY E + ++ + +KR +I+ +P++ VG +
Sbjct: 106 RYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQV 165
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
A+ELGK W V K YEQ A+ DK RY EM YK
Sbjct: 166 AQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 203
>gi|71986268|ref|NP_001022599.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
gi|373219053|emb|CCD83370.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
Length = 234
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 89/158 (56%), Gaps = 28/158 (17%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTM + EK+RF+E+A KD +
Sbjct: 45 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAE 104
Query: 70 RYDTE----------------------------MQSYTPPAGEKRGKIKQDNPEYGVGDI 101
RY E + ++ + +KR +I+ +P++ VG +
Sbjct: 105 RYQAEVSVAAYGGEDAMRKRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQV 164
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
A+ELGK W V K YEQ A+ DK RY EM YK
Sbjct: 165 AQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 202
>gi|1083056|pir||B61611 nonhistone chromosomal protein HMG-2 - bovine (fragments)
Length = 186
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 86/150 (57%), Gaps = 31/150 (20%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ REEHKKKHP+ +V F+E RWKTMS KEK +F +MA D
Sbjct: 7 KPRGKMSSYAFFVQTSREEHKKKHPDASVNFSE-------RWKTMSAKEKSKFEDMAKSD 59
Query: 68 KKRYDTEMQSYT------------------PP------AGEKRGKIKQDNPEYGVGDIAK 103
K RYD EM++Y PP + E R KIK ++P +GD AK
Sbjct: 60 KARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFSAEHRPKIKAEHPGLSIGDTAK 119
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+LG+ W+ K YEQ A K K +YEK
Sbjct: 120 KLGEMWSQQSAKDKQPYEQKASKLKEKYEK 149
>gi|444518919|gb|ELV12461.1| High mobility group protein B3 [Tupaia chinensis]
Length = 185
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 88/152 (57%), Gaps = 24/152 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AY FFVQ CRE+HKKK+PE V FAEFSKK +ERWKTMS KEK +F EMA +K YD
Sbjct: 13 MSAYTFFVQTCREKHKKKNPEVPVKFAEFSKKGSERWKTMSGKEKSKFDEMAKVNKVHYD 72
Query: 73 TEMQSYTPPAGEKR----------------------GKIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y P G K+ KI+ +NP +GD+AK+LG+ W
Sbjct: 73 REMKDYGPAKGGKKKRDPNAPKRPPSGFFLFCSEFCPKIRSNNPGISIGDVAKKLGEMWN 132
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ S K Y A K +YEK++ YK++
Sbjct: 133 NKSDSEKQPYNTKAT--KLKYEKDVADYKSKG 162
>gi|6624099|gb|AAF19244.1|AC007277_1 similar to nonhistone chromosomal protein HMG-1 [Homo sapiens];
probable pseudogene; similar to P09429 (PID:g123369)
[Homo sapiens]
Length = 191
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 80/129 (62%), Gaps = 24/129 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREE KKKHP+ +V F+EFSKKC+ERWK MS K+K +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREECKKKHPDASVNFSEFSKKCSERWKAMSAKDKGKFEDMAKVD 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K RY+ EM++Y PP GE + KIK ++P + D+AK
Sbjct: 68 KDRYEREMKTYIPPKGETKKKFEDSNAPKRPPSAFLLFCSEYCPKIKGEHPGLPISDVAK 127
Query: 104 ELGKKWADV 112
+L + W +
Sbjct: 128 KLVEMWNNT 136
>gi|183212219|gb|ACC54772.1| high mobility group box 3 [Xenopus borealis]
Length = 152
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 79/132 (59%), Gaps = 22/132 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYA+FVQ CREEHKKK PE V F+EFSKKC+ERW+TMS KEK +F ++A DK RYD
Sbjct: 21 MSAYAYFVQTCREEHKKKDPEIPVNFSEFSKKCSERWRTMSGKEKSKFDDLAKVDKVRYD 80
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWA 110
EM+ + PP+G E R IK NP +GD+AK+LG+ W
Sbjct: 81 NEMKDFGPVKKGKKKKDPNAPKRPPSGFFLFCSEFRPNIKSTNPGITIGDVAKKLGEMWN 140
Query: 111 DVDPSVKTKYEQ 122
++ S K Y
Sbjct: 141 NLGDSEKQPYNN 152
>gi|32335|emb|CAA78938.1| HMG2B [Homo sapiens]
Length = 186
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 24/139 (17%)
Query: 24 REEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYT---- 79
REEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA DK RYD EM++Y
Sbjct: 1 REEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKG 60
Query: 80 --------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTK 119
PP+ E R KIK ++P +GD AK+LG+ W++ K
Sbjct: 61 DKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQP 120
Query: 120 YEQMAEKDKARYEKEMTAY 138
YEQ A K K +YEK++ AY
Sbjct: 121 YEQKAAKLKEKYEKDIAAY 139
>gi|56757397|gb|AAW26868.1| unknown [Schistosoma japonicum]
Length = 252
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 91/162 (56%), Gaps = 38/162 (23%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKT----------MSEKEK 57
KP+GRM AYA F+Q R +HKKKHP + F FSK+C+E+WK +S KEK
Sbjct: 7 KPKGRMNAYALFLQSMRADHKKKHPNATLDFKSFSKECSEQWKVSYVLVYYFSNLSAKEK 66
Query: 58 KRFHEMADKDKKRYDTEMQSYTPPAGEKRG--------------------------KIKQ 91
K+F ++A+KDK+RY EM+ Y PPA E R K+K
Sbjct: 67 KKFKDLAEKDKERYRCEMEHYEPPADEGRSKKRKRDPDAPKKGLSAFFLFCNDERPKVKS 126
Query: 92 DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
+NP++ V ++AKELG++W K KYE +A+ +K RYEK
Sbjct: 127 ENPDWKVSEVAKELGRRWEHCKN--KAKYESLAQVEKERYEK 166
>gi|426392256|ref|XP_004062472.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Gorilla gorilla gorilla]
Length = 198
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 25/154 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YA+FVQ C+EEHKK HP+ +V F+EFSKKC+ERWKTM KEK +F +MA DK Y+
Sbjct: 1 MSSYAYFVQTCQEEHKK-HPDASVNFSEFSKKCSERWKTMPAKEKGKFEDMAKADKTHYE 59
Query: 73 TEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAKELGKK 108
+M++Y PP GE + KIK ++P +GD+ K+LG+
Sbjct: 60 RQMKTYIPPKGETKKKFKDPSAPKRPPSAFFLFCSEYHPKIKGEHPGLSIGDVVKKLGEM 119
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W D K YE+ A K K +YEK++ AY+ +
Sbjct: 120 WNDTAADDKQPYEKKAAKLKEKYEKDIAAYQAKG 153
>gi|444728659|gb|ELW69107.1| High mobility group protein B1 [Tupaia chinensis]
Length = 182
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/100 (56%), Positives = 72/100 (72%), Gaps = 5/100 (5%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
PRG+M++ AFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F ++A DK
Sbjct: 9 PRGKMSSQAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDVAKADK 68
Query: 69 KRYDTEMQSYTPPAGEKRGKIKQDN-----PEYGVGDIAK 103
R + EM++Y PP GE + K K N P V +IA+
Sbjct: 69 ARSEREMKTYIPPKGETKKKFKDPNAPKRPPSCSVLNIAQ 108
>gi|355705177|gb|EHH31102.1| hypothetical protein EGK_20957, partial [Macaca mulatta]
Length = 185
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/157 (44%), Positives = 91/157 (57%), Gaps = 29/157 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K +G+++AYAFFVQ+CREEHKKK+PE V FAEFSKKC+ RWKTMS KEK +F E+A D
Sbjct: 8 KLKGKVSAYAFFVQMCREEHKKKYPEVPVNFAEFSKKCSRRWKTMSRKEKSKFDELAKTD 67
Query: 68 KKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKEL 105
K YD EM+ Y PP+G E KIK NP +GD+ K+L
Sbjct: 68 KVHYDQEMKDYGPAKGGKKKKDSNTFKRPPSGFFLFCSEFHPKIKSTNPGISIGDVKKKL 127
Query: 106 GKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
G +++ K Y K K YEK++ YK++
Sbjct: 128 G----EIE---KQPYIIKVAKLKEEYEKDVAEYKSKG 157
>gi|444727522|gb|ELW68010.1| High mobility group protein B1 [Tupaia chinensis]
Length = 132
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 63/76 (82%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+PRG+M++YAFFVQ+CREEHKKKHP +V F EFSKKC++RWKTMS KEK +F +MA D
Sbjct: 8 RPRGKMSSYAFFVQICREEHKKKHPYASVNFPEFSKKCSDRWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAG 83
K RY+ EM++Y PP G
Sbjct: 68 KARYEREMKTYIPPNG 83
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVG--DIAKELGKKWADVDPSVKTKY 120
M D KR +M SY R + K+ +P V + +K+ +W + K K+
Sbjct: 1 MDKGDPKRPRGKMSSYAFFVQICREEHKKKHPYASVNFPEFSKKCSDRWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|159162034|pdb|1AAB|A Chain A, Nmr Structure Of Rat Hmg1 Hmga Fragment
Length = 83
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 64/77 (83%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ REEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 7 KPRGKMSSYAFFVQTSREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 66
Query: 68 KKRYDTEMQSYTPPAGE 84
K RY+ EM++Y PP GE
Sbjct: 67 KARYEREMKTYIPPKGE 83
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 67 DKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQMA 124
D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+E MA
Sbjct: 4 DPKKPRGKMSSYAFFVQTSREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMA 63
Query: 125 EKDKARYEKEMTAY 138
+ DKARYE+EM Y
Sbjct: 64 KADKARYEREMKTY 77
>gi|444729048|gb|ELW69479.1| High mobility group protein B1 [Tupaia chinensis]
Length = 172
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 75/117 (64%), Gaps = 24/117 (20%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFV+ C+EEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F ++A DK RY+
Sbjct: 1 MSSYAFFVKTCQEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFGDVAKADKARYE 60
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKEL 105
EM++Y PP GE R KIK D+P +GD+AK+L
Sbjct: 61 REMKTYIPPKGETKKKSKDPNAPKRPPSAFFLFSSEYRPKIKGDHPGLSIGDVAKKL 117
>gi|444732758|gb|ELW73033.1| High mobility group protein B2 [Tupaia chinensis]
Length = 234
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 84/139 (60%), Gaps = 24/139 (17%)
Query: 25 EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYT----- 79
EEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA DK RYD EM+SY
Sbjct: 59 EEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKVRYDREMKSYVPPKGD 118
Query: 80 -------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKY 120
PP+ E R KIK ++P +GD AK+LG+ W++ K Y
Sbjct: 119 KKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPY 178
Query: 121 EQMAEKDKARYEKEMTAYK 139
EQ A K K +YEK++ AY+
Sbjct: 179 EQKAAKLKEKYEKDIAAYR 197
>gi|426397135|ref|XP_004064781.1| PREDICTED: high mobility group protein B3-like [Gorilla gorilla
gorilla]
Length = 221
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 87/156 (55%), Gaps = 21/156 (13%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYAFF Q CREEHKKK+ E V F EFSKKC+E+ KTMS KEK + EMA D
Sbjct: 28 KPKGKMSAYAFFAQTCREEHKKKNSEVPVNFVEFSKKCSEKRKTMSGKEKTKSDEMAKVD 87
Query: 68 KKRYDTEMQSYTPPAGEK---------------------RGKIKQDNPEYGVGDIAKELG 106
K YD EM+ P G K R KIK NP +GD+AK+LG
Sbjct: 88 KVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFRPKIKSTNPGISIGDMAKKLG 147
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ W + K Y A K +YEK++ YK++
Sbjct: 148 EMWINYSDREKQPYITKAADLKEKYEKDVADYKSKG 183
>gi|441618163|ref|XP_003271355.2| PREDICTED: high mobility group protein B3-like [Nomascus
leucogenys]
Length = 206
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 90/152 (59%), Gaps = 24/152 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
++AYAFFVQ CREEHKKK+PE V FAEFSKK +ER KTMS KEK +F EMA DK RYD
Sbjct: 19 ISAYAFFVQTCREEHKKKNPEVPVNFAEFSKKWSERCKTMSGKEKSKFDEMAKADKVRYD 78
Query: 73 TEMQSYTP------------PAGEKRG----------KIKQDNPEYGVGDIAKELGKKWA 110
EM+ Y P P + G KIK P +GD+AK+LG+ W
Sbjct: 79 REMKDYGPAKGGKKKKDPNAPKMPQSGFFLFCSEFCLKIKSTKPGISIGDVAKKLGEMWN 138
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+++ S K Y + + K +YEK++ YK++
Sbjct: 139 NLNDSEKQPY--ITKAAKLKYEKDVADYKSKG 168
>gi|148697258|gb|EDL29205.1| mCG50622 [Mus musculus]
Length = 102
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 66/79 (83%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKR 86
K Y+ EM++YTP G+++
Sbjct: 68 KAGYEREMKTYTPQRGDQK 86
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKA YE+EM Y
Sbjct: 61 EDMAKADKAGYEREMKTY 78
>gi|444726552|gb|ELW67081.1| High mobility group protein B1 [Tupaia chinensis]
Length = 126
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 66/86 (76%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ C EE KKKHP+ +V F+EFSKKC+ERWKTMS KEK +F + A D
Sbjct: 8 KPRGKMSSYAFFVQTCWEEDKKKHPDASVSFSEFSKKCSERWKTMSAKEKGKFEDTAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN 93
K RY+ EM++Y PP GE + K K N
Sbjct: 68 KVRYEREMKTYIPPKGETKEKFKDPN 93
>gi|395850653|ref|XP_003797893.1| PREDICTED: uncharacterized protein LOC100942737 [Otolemur
garnettii]
Length = 633
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 68/154 (44%), Positives = 93/154 (60%), Gaps = 25/154 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M+++AFFVQ CREEHKK HP+ +V F+EFSKKC ER KTMS KEK +F + A D
Sbjct: 432 KPRGKMSSFAFFVQTCREEHKK-HPDASVNFSEFSKKCLERCKTMSAKEKGKFEDTAKAD 490
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K Y+ EM++Y PP GE R KIK ++P +GD+A+
Sbjct: 491 KAHYEREMETYIPPKGETKKKFKDPNAPKRPPSAFFWFCSEYRPKIKGEHPGLSIGDVAE 550
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
+LG+ W++ K E+ A K K +YEK++ A
Sbjct: 551 KLGEMWSNTAEGDKQPEEKKAAKLKEKYEKDIAA 584
>gi|441595508|ref|XP_004087247.1| PREDICTED: uncharacterized protein LOC101177382, partial [Nomascus
leucogenys]
Length = 276
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/116 (53%), Positives = 72/116 (62%), Gaps = 22/116 (18%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK + EMA D+ RYD
Sbjct: 159 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSRKEKSKSDEMAKADEVRYD 218
Query: 73 TEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELG 106
EM+ Y PP+G E KIK NP +GD+AK+LG
Sbjct: 219 QEMKDYGPAKGGKKKKDPNAPKRPPSGFSLFCSEFHPKIKSTNPGISIGDVAKKLG 274
>gi|355562304|gb|EHH18898.1| hypothetical protein EGK_19468, partial [Macaca mulatta]
Length = 159
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 80/129 (62%), Gaps = 19/129 (14%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE +V FAEFSKKC+ERWKTM KEK +F +
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVSVNFAEFSKKCSERWKTMPGKEKSKFLFCS-------- 64
Query: 73 TEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
E R KIK NP +GD+AK+LG+ W +++ S K Y A K K +YE
Sbjct: 65 -----------EFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYE 113
Query: 133 KEMTAYKNR 141
K++ YK++
Sbjct: 114 KDVADYKSK 122
>gi|432091911|gb|ELK24758.1| High mobility group protein B1 [Myotis davidii]
Length = 224
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 73/119 (61%), Gaps = 24/119 (20%)
Query: 12 RMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRY 71
+M++YAFF+Q CREEHKKKH + +V F+EFSKKC ERWKT S KEK +F +MA+ DK RY
Sbjct: 106 KMSSYAFFMQTCREEHKKKHSDSSVNFSEFSKKCLERWKTRSAKEKSKFEDMANSDKARY 165
Query: 72 DTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAKELG 106
D EM++Y PP E R KIK ++P +GD AK++G
Sbjct: 166 DREMKNYVPPKGDKEGKKKDPNAPKKLPFAFFLFCSEHRQKIKSEHPGLSIGDTAKKIG 224
>gi|27450225|gb|AAO14565.1|AF462604_2 HMG-L6 [Mus musculus]
Length = 199
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 92/156 (58%), Gaps = 27/156 (17%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
R + ++YAFFVQ C EEHKKKHP+ +V F+EFSKKC+ERW+TMS KEK + +MA DK
Sbjct: 17 RDKTSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWETMSAKEKGKCEDMAKADKA 76
Query: 70 RYDTEMQS--YTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
Y+ EM++ + PP E R KIK ++P +GD+AK
Sbjct: 77 HYEREMKTTFHHPPKAETKKKFKDRNAPKRPSSAFFLFCSEYRPKIKGESPGLSIGDVAK 136
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W + K YE+ A K K +Y+K++ AY+
Sbjct: 137 KLGEMWNNTAADDKQLYEKAA-KLKEKYKKDIAAYR 171
>gi|148669729|gb|EDL01676.1| mCG1025710 [Mus musculus]
Length = 178
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 92/156 (58%), Gaps = 27/156 (17%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
R + ++YAFFVQ C EEHKKKHP+ +V F+EFSKKC+ERW+TMS KEK + +MA DK
Sbjct: 17 RDKTSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWETMSAKEKGKCEDMAKADKA 76
Query: 70 RYDTEMQS--YTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
Y+ EM++ + PP E R KIK ++P +GD+AK
Sbjct: 77 HYEREMKTTFHHPPKAETKKKFKDRNAPKRPSSAFFLFCSEYRPKIKGESPGLSIGDVAK 136
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W + K YE+ A K K +Y+K++ AY+
Sbjct: 137 KLGEMWNNTAADDKQLYEKAA-KLKEKYKKDIAAYR 171
>gi|355694838|gb|AER99802.1| high-mobility group box 2 [Mustela putorius furo]
Length = 100
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CR EHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 9 KPRGKMSSYAFFVQTCRGEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 68
Query: 68 KKRYDTEMQSYT 79
K RYD EM++Y
Sbjct: 69 KARYDREMKNYV 80
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D + +M SY RG+ K+ +P+ V + +K+ ++W + K+K+
Sbjct: 2 MGKGDPNKPRGKMSSYAFFVQTCRGEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 61
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARY++EM Y
Sbjct: 62 EDMAKSDKARYDREMKNY 79
>gi|296199401|ref|XP_002747150.1| PREDICTED: high mobility group protein B1-like [Callithrix jacchus]
Length = 209
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 31/168 (18%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K K RG+M++YAFFVQ C EE KKKHP+ + F+EFSKKC+ERWKTMS KE +
Sbjct: 1 MAKGDPKKLRGKMSSYAFFVQTCCEEPKKKHPDASASFSEFSKKCSERWKTMSAKEGGKS 60
Query: 61 HEMADKDKKRYDTE------MQSYTPPAGEKRG------------------------KIK 90
MA DK Y E M++Y PP GE + KIK
Sbjct: 61 EAMAKTDKAHYKREMKAGRRMKTYIPPKGETKKKFKDPNAPKRFPSAFFLFCSECYPKIK 120
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
++P VGD+ K+LG+ W++ K YE+ A K + +Y +E+ AY
Sbjct: 121 GEHPGLSVGDV-KKLGEMWSNTAAGDKQPYEKKAAKLRKKYGRELAAY 167
>gi|148682424|gb|EDL14371.1| mCG8587 [Mus musculus]
Length = 130
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 61/72 (84%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYT 79
K RY+ EM++Y
Sbjct: 68 KARYEREMKTYI 79
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + +K+ ++W + K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|444706991|gb|ELW48303.1| High mobility group protein B1 [Tupaia chinensis]
Length = 103
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 64/81 (79%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ C+EEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA DK RY+
Sbjct: 1 MSSYAFFVQTCQEEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 60
Query: 73 TEMQSYTPPAGEKRGKIKQDN 93
EM++Y PP GE + K K N
Sbjct: 61 REMKTYIPPKGETKKKFKDPN 81
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 90 KQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
K+ +P+ V + +K+ ++W + K K+E MA+ DKARYE+EM Y
Sbjct: 16 KKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY 66
>gi|392339776|ref|XP_002726360.2| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 253
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 93/170 (54%), Gaps = 29/170 (17%)
Query: 1 MPKEKDV-----KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEK 55
+P EKD P+G++++Y FFVQ EEHKK+HP+ +V F+EFSKKC+ERWKTM K
Sbjct: 54 VPLEKDAGPDPQNPKGKVSSYTFFVQTW-EEHKKQHPDASVNFSEFSKKCSERWKTMCAK 112
Query: 56 EKKRFHEMADKDKKRYDTEMQSYTPPAGEK-----------------------RGKIKQD 92
E ++ +MA DK ++ EM++Y P GE R KIK
Sbjct: 113 ENGKYEDMAKADKAHHEREMKTYILPKGETKKRFKDPNALKRPPSAFLFCSDHRPKIKGK 172
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+P +GD+AK LG+ W K E+ A K K YEK++ AY+ +
Sbjct: 173 HPGLSIGDVAKNLGEMWNSTVMDDKQPSEKKATKLKETYEKDIAAYRAKG 222
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur garnettii]
Length = 255
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 21/151 (13%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
++A AFFVQ CR+EHKKK+PE V FAEFSKKC+ RW+ S KEK +F EM DK YD
Sbjct: 37 LSACAFFVQTCRKEHKKKNPEVPVNFAEFSKKCSLRWEAKSGKEKSKFDEMEKADKVCYD 96
Query: 73 TEMQSYT---------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
EM+ Y PP+G E KIK NP +GD+AK+L + W++
Sbjct: 97 REMKDYGLAKGGKKKDPNAPTRPPSGFCLFCSEFHPKIKSTNPGISIGDVAKKLSEMWSN 156
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ S K Y A + + +YEK++ YK++
Sbjct: 157 LSGSEKQPYITKAAQLREKYEKDVADYKSKG 187
>gi|402583047|gb|EJW76991.1| hypothetical protein WUBG_12099 [Wuchereria bancrofti]
Length = 170
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 87/148 (58%), Gaps = 26/148 (17%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y FFV++C EEHKKK+P ENV E SKKC+E+WKTMS+ EK+RF E+A KD +
Sbjct: 10 RGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMSDDEKRRFFELAQKDAE 69
Query: 70 RYDTEMQSYT--------------PPA------------GEKRGKIKQDNPEYGVGDIAK 103
RY E+ +Y P A +KR +++Q +PE+ VG +A+
Sbjct: 70 RYQAEVAAYGGEDALRKRKRVKKDPNAPKRALSAFFFFSHDKRPEVQQQHPEWKVGQVAQ 129
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARY 131
ELG+ W + + YE+ A +DK RY
Sbjct: 130 ELGRFWKALGEEERAVYERKALEDKERY 157
>gi|402889604|ref|XP_003908101.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 198
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 92/158 (58%), Gaps = 23/158 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K R M++YAFFVQ C+EEH+KK+P+ +V F+EF KKC E WKT+ KE+ +F +MA D
Sbjct: 8 KLRSEMSSYAFFVQTCQEEHEKKNPDASVDFSEFVKKCLEMWKTIFAKERGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK-----------------------RGKIKQDNPEYGVGDIAKE 104
K Y+ EM++ PP GEK R KIK ++P + D+ K+
Sbjct: 68 KAGYEREMKTCIPPKGEKKKFKDPSAPRRPPLAFFVFCSKNRPKIKGEHPGLSIDDVVKK 127
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
L + W + + K Y+++A K K +Y+K++ AY+ +
Sbjct: 128 LAEMWNNTAVADKQFYKKVAAKLKEKYKKDIAAYRTKG 165
>gi|209734090|gb|ACI67914.1| High mobility group protein B2 [Salmo salar]
Length = 136
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MP + KP+G+ ++YAFFV CREEHKKKHP +V F+EFSKKC+ERW+TMS KEK +F
Sbjct: 1 MPGKDPNKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRTMSAKEKVKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGE 84
+MA DK RYD M+ Y PP G
Sbjct: 61 EDMAKGDKVRYDKNMKGYVPPRGH 84
>gi|444526057|gb|ELV14266.1| High mobility group protein B1 [Tupaia chinensis]
Length = 166
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 88/154 (57%), Gaps = 24/154 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFF Q CRE +KKKH + +V F+EFSKKC ERWKTMS KEK +F + A D+ R
Sbjct: 1 MSSYAFFGQTCREAYKKKHSDASVNFSEFSKKCPERWKTMSAKEKGKFEDKAKADEARCG 60
Query: 73 TEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP GE + KIK ++P +GD+ K+LG+
Sbjct: 61 REMKTYIPPKGETKKKFKDPNTPKRPPSAFFLFCSEYSPKIKGEHPGLPIGDVTKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W + K YE+ A K K +YEK++ AY+ R
Sbjct: 121 WNNTGADEKQPYEKKAAKLKEKYEKDIAAYRARG 154
>gi|344239055|gb|EGV95158.1| High mobility group protein B1 [Cricetulus griseus]
Length = 107
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EF KKC+E WKT+S KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFLKKCSENWKTVSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPP 81
K RY+ EM++Y PP
Sbjct: 68 KARYEREMKTYIPP 81
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ +M SY R + K+ +P+ V + K+ + W V K K+
Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFLKKCSENWKTVSAKEKGKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MA+ DKARYE+EM Y
Sbjct: 61 EDMAKADKARYEREMKTY 78
>gi|148704837|gb|EDL36784.1| mCG125662 [Mus musculus]
Length = 154
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 60/71 (84%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++ AFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK RF +MA D
Sbjct: 32 KPRGKMSSNAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGRFEDMAKAD 91
Query: 68 KKRYDTEMQSY 78
K RY+ EM++Y
Sbjct: 92 KARYEREMKTY 102
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 49 WKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELG 106
W T+ E+ + + M D K+ +M S R + K+ +P+ V + +K+
Sbjct: 12 WATLCLAEENQLN-MGKGDPKKPRGKMSSNAFFVQTCREEHKKKHPDASVNFSEFSKKCS 70
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
++W + K ++E MA+ DKARYE+EM Y
Sbjct: 71 ERWKTMSAKEKGRFEDMAKADKARYEREMKTY 102
>gi|5542190|pdb|1CKT|A Chain A, Crystal Structure Of Hmg1 Domain A Bound To A
Cisplatin-modified Dna Duplex
Length = 71
Score = 108 bits (269), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 61/71 (85%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 1 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 60
Query: 68 KKRYDTEMQSY 78
K RY+ EM++Y
Sbjct: 61 KARYEREMKTY 71
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
M SY R + K+ +P+ V + +K+ ++W + K K+E MA+ DKARYE
Sbjct: 6 MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYE 65
Query: 133 KEMTAY 138
+EM Y
Sbjct: 66 REMKTY 71
>gi|47227049|emb|CAG00411.1| unnamed protein product [Tetraodon nigroviridis]
Length = 179
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 62/74 (83%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA+FVQ CREEHKKKHP+ +V F+EFS+KC+ERWKTMS KEK +F +MA +D
Sbjct: 11 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSRKCSERWKTMSVKEKGKFEDMAKQD 70
Query: 68 KKRYDTEMQSYTPP 81
K RYD EM + + P
Sbjct: 71 KVRYDQEMMNTSQP 84
>gi|444727550|gb|ELW68036.1| High mobility group protein B1 [Tupaia chinensis]
Length = 149
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 25/139 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M+++AFFVQ CRE+HKK HP+ +V F+EF+KKC+ RWK MS KEK++F +MA
Sbjct: 8 KPRGKMSSHAFFVQTCREKHKK-HPDASVNFSEFAKKCSGRWKIMSAKEKEKFEDMAKAG 66
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K RY EM++Y PP E R KIK ++P + D AK
Sbjct: 67 KARYGREMKTYIPPKVETKEKFKNPSAPKRPPSAFFLFCSEYRPKIKGEHPGLSIDDAAK 126
Query: 104 ELGKKWADVDPSVKTKYEQ 122
+LG+ W + K YE+
Sbjct: 127 KLGEMWNNTAADDKQPYEK 145
>gi|444523921|gb|ELV13661.1| High mobility group protein B1 [Tupaia chinensis]
Length = 226
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 86/152 (56%), Gaps = 23/152 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++ A FVQ CREEH+K HP+ ++ F+EFSK+C+ERWKT+S KEK +F MA DK RY+
Sbjct: 1 MSSDASFVQTCREEHRKTHPDASINFSEFSKECSERWKTVSAKEKGKFGGMAKVDKARYE 60
Query: 73 TEMQSYTPPAGEK-----------------------RGKIKQDNPEYGVGDIAKELGKKW 109
E +++ P GE R KIK +P +GD+AK+LG+
Sbjct: 61 RETKTHIPSKGETKKFKDPNVSKKPPSAFCLYCSEYRPKIKGGHPGLSIGDVAKKLGELQ 120
Query: 110 ADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
YE+ A K K +YEK++ AY+ +
Sbjct: 121 NSTAADDTQPYEKKASKLKEKYEKDIAAYRAK 152
>gi|444730109|gb|ELW70504.1| High mobility group protein B1 [Tupaia chinensis]
Length = 208
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 24/154 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHKKKHP+ +V F+ FSKK +E+WKTMS KEK +F +MA DK R +
Sbjct: 1 MSSYAFFVQTCREEHKKKHPDASVNFSGFSKKRSEKWKTMSAKEKGKFEDMAKADKARDE 60
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
EM++Y PP GE R KIK + +GD+AK+LG+
Sbjct: 61 REMKTYIPPKGETKKKFKDPSAPKRPPLAFFLFCSEYRPKIKGEQSGLSIGDVAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W + K YE+ A K K +Y+K++ AY+ +
Sbjct: 121 WNNTAADDKQPYEKKAAKLKEKYKKDIAAYRAKG 154
>gi|148694629|gb|EDL26576.1| mCG10155, isoform CRA_c [Mus musculus]
Length = 101
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/77 (68%), Positives = 59/77 (76%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYTPPAGEKRGKI 89
EM+ Y P G GK+
Sbjct: 73 REMKDYGPAKGGCEGKM 89
>gi|47198174|emb|CAF88344.1| unnamed protein product [Tetraodon nigroviridis]
Length = 102
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Query: 5 KDV-KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KDV KP+G+ AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK +S +KK F +M
Sbjct: 4 KDVNKPKGKTFAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKALSAGDKKCFEDM 63
Query: 64 ADKDKKRYDTEMQSYTPPAG-EKRGKIKQD 92
A DK RY+ E++ Y PP G KRG+ ++D
Sbjct: 64 AKADKVRYNREIEDYVPPKGFGKRGRKRKD 93
>gi|50513251|pdb|1J3X|A Chain A, Solution Structure Of The N-Terminal Domain Of The Hmgb2
Length = 77
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 59/70 (84%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ REEHKKKHP+ +V FAEFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFVQTSREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD 67
Query: 68 KKRYDTEMQS 77
K RYD EM++
Sbjct: 68 KARYDREMKN 77
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
M SY R + K+ +P+ V + +K+ ++W + K+K+E MA+ DKARY+
Sbjct: 13 MSSYAFFVQTSREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYD 72
Query: 133 KEM 135
+EM
Sbjct: 73 REM 75
>gi|395859165|ref|XP_003801914.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 220
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 66/86 (76%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREE+KKKHP+ +V F+EFSKKC+ERWKTMS K+K + +MA D
Sbjct: 29 KPRGKMSSYAFFVQTCREEYKKKHPDASVSFSEFSKKCSERWKTMSPKKKGKCEDMAKAD 88
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN 93
K Y+ EM++Y P GE + K K N
Sbjct: 89 KACYEREMKTYVLPKGETKKKSKDLN 114
>gi|156369656|ref|XP_001628091.1| predicted protein [Nematostella vectensis]
gi|156215058|gb|EDO36028.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 98/180 (54%), Gaps = 33/180 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G +AY FF+Q RE K + E A+FSK AE+WK MSE+EK+ F + A KD
Sbjct: 2 KPKGAKSAYNFFLQDQRE--KLQREEGKFSLADFSKVSAEKWKNMSEEEKETFVQKAGKD 59
Query: 68 KKRYDTEMQSYTPPAGE------------------------------KRGKIKQDNPEYG 97
K+R+ EMQSYTPP E KR +K+DNP
Sbjct: 60 KERFKEEMQSYTPPPSEESGKKKRKKQTKDPNKPKRCLSAYFHFINLKRDDVKKDNPNAS 119
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV-APVNEEADEEDDE 156
G ++K LG+ W+ + KT+Y+ MA+KDK RYE EM A+K+ + A N+ + E+DE
Sbjct: 120 GGALSKVLGEMWSKMTDDDKTQYQDMAKKDKVRYESEMKAFKDGKLPAKQNKTKEVEEDE 179
>gi|355565174|gb|EHH21663.1| hypothetical protein EGK_04785, partial [Macaca mulatta]
Length = 201
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 35/156 (22%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M+A+AFFVQ C +EHK++HP +V F+EFS+KC ERWK M+ KEK +F +M D
Sbjct: 8 KLRGKMSAHAFFVQTCWKEHKQQHPAASVNFSEFSQKCLERWKIMTAKEKGKFEDMPKAD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K Y+ EM++Y PP E R KIK ++P +GD+ K
Sbjct: 68 KAHYEREMKTYIPPKRETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVGK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+ G+ W D A DK YEK++ K
Sbjct: 128 KPGEMWNDT-----------AADDKHPYEKDIVHIK 152
>gi|444732125|gb|ELW72437.1| High mobility group protein B1 [Tupaia chinensis]
Length = 106
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 65/86 (75%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG++++YAFF+Q CREEHKKKHP+ +V+F+EF KK +ERW+ MS KEK +F +MA D
Sbjct: 8 KSRGKISSYAFFLQTCREEHKKKHPDASVIFSEFPKKYSERWEAMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN 93
K Y+ EM++Y PP GE + K K N
Sbjct: 68 KAHYEREMKTYIPPKGETKKKFKDPN 93
>gi|351706098|gb|EHB09017.1| E3 ubiquitin-protein ligase RFWD2 [Heterocephalus glaber]
Length = 734
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 63/83 (75%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RGRM++ AFFVQ CREEHKKKHP+ +V F+E KKC+ERWKTMS KEK F +MA+ D
Sbjct: 8 KLRGRMSSCAFFVQTCREEHKKKHPDTSVNFSELPKKCSERWKTMSAKEKGTFEDMAEVD 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIK 90
K RY+ EM++Y P EK+ ++
Sbjct: 68 KARYEREMKTYIPKGEEKKRSLR 90
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
M D K+ M S R + K+ +P+ V ++ K+ ++W + K +
Sbjct: 1 MGKGDPKKLRGRMSSCAFFVQTCREEHKKKHPDTSVNFSELPKKCSERWKTMSAKEKGTF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
E MAE DKARYE+EM Y
Sbjct: 61 EDMAEVDKARYEREMKTY 78
>gi|395526464|ref|XP_003765383.1| PREDICTED: high mobility group protein B4 [Sarcophilus harrisii]
Length = 207
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 85/159 (53%), Gaps = 26/159 (16%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
VKP+ +++Y F+ CR +HK++ P + F EFSK+C+E+WKT+S+ EK ++ +A
Sbjct: 6 VKPKVNLSSYVHFLLNCRNKHKEQQPNAYINFKEFSKRCSEKWKTISKHEKSKYEAIARL 65
Query: 67 DKKRYDTEMQSYTPPAG--------------------------EKRGKIKQDNPEYGVGD 100
DK RY EM++Y PP G E KIK DNP + V
Sbjct: 66 DKARYQKEMKNYVPPVGMKKRKRRKKDPKAPKRPPSSFFLFSREHYTKIKSDNPHWSVVQ 125
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK LG+ W+ K YE+ A + +A+Y +E+ Y+
Sbjct: 126 VAKLLGEMWSKKSEQDKQPYEEKAARLRAKYHQELMTYR 164
>gi|281339988|gb|EFB15572.1| hypothetical protein PANDA_018974 [Ailuropoda melanoleuca]
Length = 212
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 37/171 (21%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ C+EEHKKK P+ +V F+EFSKKC+E WKTMS K+K +F + A D
Sbjct: 8 KLRGKMSSYAFFVQTCQEEHKKKQPDASVNFSEFSKKCSEMWKTMSAKDKGKFEDTAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK-------------------------------------RGKIK 90
K + EM++Y P GE R KIK
Sbjct: 68 KAHNEREMKTYIPSKGETKKEFQGSQCTLCAHFSSTYTSVPKSPPSAFFLFCSEYRPKIK 127
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
++P + D+A +LG+ W K + + A K + ++EK++ AY+ +
Sbjct: 128 GEHPSLLINDVATKLGEMWDKTASDNKQLHGKKAAKLQEKWEKDIAAYRAK 178
>gi|301786997|ref|XP_002928914.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 228
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 37/171 (21%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++YAFFVQ C+EEHKKK P+ +V F+EFSKKC+E WKTMS K+K +F + A D
Sbjct: 8 KLRGKMSSYAFFVQTCQEEHKKKQPDASVNFSEFSKKCSEMWKTMSAKDKGKFEDTAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEK-------------------------------------RGKIK 90
K + EM++Y P GE R KIK
Sbjct: 68 KAHNEREMKTYIPSKGETKKEFQGSQCTLCAHFSSTYTSVPKSPPSAFFLFCSEYRPKIK 127
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
++P + D+A +LG+ W K + + A K + ++EK++ AY+ +
Sbjct: 128 GEHPSLLINDVATKLGEMWDKTASDNKQLHGKKAAKLQEKWEKDIAAYRAK 178
>gi|444705868|gb|ELW47253.1| High mobility group protein B1 [Tupaia chinensis]
Length = 182
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 92/154 (59%), Gaps = 24/154 (15%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++ +FF Q CR+EHKKKHP+ +V F+EFSKK +ERWKTMS K+K +F + A DK RY+
Sbjct: 1 MSSNSFFEQTCRKEHKKKHPDASVNFSEFSKKGSERWKTMSAKQKGKFEDRAKVDKARYE 60
Query: 73 TEMQSYTPPAGEKRGKIKQDN-------------PEYG-----------VGDIAKELGKK 108
EM++Y PP GE + K K N PEY +GD+AK+LG+
Sbjct: 61 REMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCPEYHPKLKEGHPGLIIGDVAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
W + K YE+ A K K +Y++++ AY+ +
Sbjct: 121 WGNAAADGKQPYEKKAAKLKEKYKEDIAAYRAKG 154
>gi|392340076|ref|XP_003753981.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein C-like 1-like [Rattus norvegicus]
gi|392347426|ref|XP_003749828.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein C-like 1-like [Rattus norvegicus]
Length = 484
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 20/152 (13%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG++ +Y FFVQ C+EEHKKKHP+ +V F+EFSKKC+ERWKT+S KEK +F +MA D
Sbjct: 8 KLRGKIWSYTFFVQTCQEEHKKKHPDASVNFSEFSKKCSERWKTISAKEKWKFEDMAKVD 67
Query: 68 KKRYDTEMQSYTPPAGEK-----------RGKIKQDNPEYGVGDIAKE---------LGK 107
K Y+ EM++YT P E+ RG ++ +K LG+
Sbjct: 68 KAHYEREMKTYTHPLKERPKRSSRTLVHPRGLLQTCCSVLSTIQKSKARILAYPLVILGE 127
Query: 108 KWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
W + K YE+ A K K + EK++ AY+
Sbjct: 128 MWNNTAVDHKQPYEKEAAKLKEKNEKDIAAYR 159
>gi|395857418|ref|XP_003801091.1| PREDICTED: high mobility group protein B1-like [Otolemur garnettii]
Length = 197
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 24/145 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M++ AFFVQ EEHKKKHP +V F+EFSKKC+ERWKTMS KE+ +F +MA D
Sbjct: 50 KLRGKMSSCAFFVQTSWEEHKKKHPGASVTFSEFSKKCSERWKTMSGKERGKFEDMAKAD 109
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN------------------------PEYGVGDIAK 103
K Y+ EM++Y GE + K K N P +G++AK
Sbjct: 110 KAPYEREMKTYILRKGETKKKFKDPNAPKRPLSAFFLFCSEYCPKSKGEHPGLSIGEVAK 169
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDK 128
+LG W + K YE+ A K K
Sbjct: 170 KLGVMWNNTAADDKQPYEKKAAKLK 194
>gi|444520312|gb|ELV12956.1| High mobility group protein B1 [Tupaia chinensis]
Length = 150
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 83/150 (55%), Gaps = 24/150 (16%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+ Y FFVQ REEHKK+H + +V F+EFSKKC+ERWKTMS KEK +F +MA D Y+
Sbjct: 1 MSPYTFFVQTFREEHKKEHSDVSVNFSEFSKKCSERWKTMSAKEKGKFEDMAKTDMALYE 60
Query: 73 TEMQSYTPPAGEKRGKIKQDN------------------------PEYGVGDIAKELGKK 108
EM++Y PP GE + K K N P G AK+LG+
Sbjct: 61 REMKTYIPPKGETKKKFKDPNVPKRPPLAFFLFCFEYCPKIKGKHPGLSTGVAAKKLGEL 120
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
W + K YE+ A K K +YEK++ AY
Sbjct: 121 WNNTAADDKQPYEKKAAKLKEKYEKDIAAY 150
>gi|444517137|gb|ELV11379.1| High mobility group protein B1 [Tupaia chinensis]
Length = 204
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 87/154 (56%), Gaps = 24/154 (15%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
R M++YAFFVQ +EEHKK+HP+ +V F+EF KKC+E+WK MS KEK +F + A DK
Sbjct: 10 RSIMSSYAFFVQTFQEEHKKQHPDASVSFSEFPKKCSEKWKAMSAKEKGKFEDRAKADKA 69
Query: 70 RYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAKEL 105
Y+ +M++ PP E KIK ++P +GD+AK L
Sbjct: 70 SYERDMKTDIPPKKETKKKFKDPNAPKRPPSAFFLFCSEYCPKIKGEHPGLSIGDVAKRL 129
Query: 106 GKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
G+ W + K YE+ A K K +YEK++ AY+
Sbjct: 130 GELWNNTAADGKQPYEKKAAKLKEKYEKDIAAYR 163
>gi|386783721|gb|AFJ24755.1| high mobility group-2 [Schmidtea mediterranea]
Length = 192
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 32/163 (19%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP G +AY + Q REE+KKK+P+ V F E SK +E+WK +S+KEK++++ +A D
Sbjct: 5 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQAD 64
Query: 68 KKRYDTEMQSYTPP------------------------------AGEKRGKIKQDNPEYG 97
KKRY EM+ Y P + E R +K+ NPE+
Sbjct: 65 KKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFK 124
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
VGDIAK LGK W++ K+KYE+M ++ K +Y M YKN
Sbjct: 125 VGDIAKVLGKMWSECKD--KSKYEEMNKEAKEKYNLAMLEYKN 165
>gi|31873563|emb|CAD97768.1| hypothetical protein [Homo sapiens]
Length = 127
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 55/68 (80%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 43 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 102
Query: 73 TEMQSYTP 80
EM+ Y P
Sbjct: 103 REMKDYGP 110
>gi|72051831|ref|XP_792040.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
gi|115767180|ref|XP_001176807.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
Length = 204
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 35/162 (21%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRGRM+AYA+FVQ ++ E V F FSK+CA+RWK M + +K+ F++ + D
Sbjct: 10 KPRGRMSAYAYFVQ-----DRRSKAEGQVNFTAFSKECADRWKHMDDGDKRPFNDKSASD 64
Query: 68 KKRYDTEMQSYTPPAGEK------------------------------RGKIKQDNPEYG 97
K RYD EM Y PP EK RG IKQ++ ++
Sbjct: 65 KIRYDREMSGYVPPMKEKNAKGGRRRAKKDPDAPKRNLSAFFLFSRDERGAIKQEHKDWS 124
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
VG IA+ L W + P+ K KY+ A +K RY +EM A+K
Sbjct: 125 VGKIAQALAAIWKTITPADKAKYDAEAALEKQRYMREMAAFK 166
>gi|345318648|ref|XP_001512288.2| PREDICTED: high mobility group protein B3-like [Ornithorhynchus
anatinus]
Length = 97
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 55/68 (80%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYTP 80
EM+ Y P
Sbjct: 73 REMKDYGP 80
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
MA D K+ +M +Y R + K+ NPE V + +K+ ++W + K+K+
Sbjct: 1 MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
++MA+ DK RY++EM Y
Sbjct: 61 DEMAKADKVRYDREMKDY 78
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 80/139 (57%), Gaps = 22/139 (15%)
Query: 26 EHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYT------ 79
EHKKK+PE V FAEFSKKC+ERWK MS KEK +F ++A DK RYD E + Y
Sbjct: 1 EHKKKNPEIPVNFAEFSKKCSERWKIMSAKEKSKFEDLAKADKVRYDREKKDYGPVKGGK 60
Query: 80 ----------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQM 123
PP+G E R KIK NP +GD+AK+LG+ W +++ K Y
Sbjct: 61 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNEGEKQPYNNK 120
Query: 124 AEKDKARYEKEMTAYKNRS 142
A K K +YEK++ YK++
Sbjct: 121 AAKLKEKYEKDVADYKSKG 139
>gi|351700697|gb|EHB03616.1| High mobility group protein B1, partial [Heterocephalus glaber]
Length = 178
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 26/151 (17%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
R +++YAFFVQ C EHKKK P+ +V F+ FS+K +ERWK +S EK + +MA DK
Sbjct: 1 RSLLSSYAFFVQPCPVEHKKKRPDASVNFSAFSRKFSERWKILSANEKGKLEDMAKADKA 60
Query: 70 RYDTEMQSYTPP---------------------AGEKRGKIKQDNPEYGVGDIAKELGKK 108
Y+ EM++Y PP +GE R KIK + P +GD+AK+LG+
Sbjct: 61 HYEREMKTYIPPKGETKKKDPNAPQTTPLAFLFSGEYRPKIKGEPPGLFIGDVAKKLGEM 120
Query: 109 WA----DVDPSVK-TKYEQMAEKDKARYEKE 134
W D P K K ++ EKD A Y+ E
Sbjct: 121 WTNTADDKQPYGKAAKLQEKCEKDIANYQAE 151
>gi|112419177|gb|AAI22328.1| Hmgb3a protein [Danio rerio]
Length = 86
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G+M+AYA+FVQ CREEHKKK PE V +EFSK+C+ RWK M++KEK RF +MA +D
Sbjct: 8 KPKGKMSAYAYFVQTCREEHKKKSPEIPVSLSEFSKRCSGRWKAMTDKEKSRFEDMAKQD 67
Query: 68 KKRYDTEMQSYTP 80
K RYD EM Y P
Sbjct: 68 KVRYDQEMMHYMP 80
>gi|332815636|ref|XP_003309551.1| PREDICTED: nuclear autoantigen Sp-100-like [Pan troglodytes]
Length = 205
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG M +YAFFVQ C+EEHKKK+P+ +V F+EF KKC+E WKT+ KEK F +MA D
Sbjct: 8 KLRGEMLSYAFFVQTCQEEHKKKNPDASVKFSEFLKKCSEMWKTIFAKEKGNFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K Y+ EM++Y PP E R KIK ++P + D+ K
Sbjct: 68 KAHYEREMKTYIPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVK 127
Query: 104 ELGKKWADVDPSVKTKY 120
+L W + + K Y
Sbjct: 128 KLAGMWNNTAAADKQFY 144
>gi|444732604|gb|ELW72891.1| High mobility group protein B2 [Tupaia chinensis]
Length = 139
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 56/71 (78%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPR +M++YAFFVQ CREEHKKK P+ +V F EFSKKC ERWKTMS KEK +F +MA D
Sbjct: 8 KPRDKMSSYAFFVQTCREEHKKKLPDSSVNFTEFSKKCWERWKTMSAKEKLKFEDMAKSD 67
Query: 68 KKRYDTEMQSY 78
+ YD EM+SY
Sbjct: 68 RGLYDREMKSY 78
>gi|426338818|ref|XP_004033369.1| PREDICTED: nuclear autoantigen Sp-100-like [Gorilla gorilla
gorilla]
Length = 205
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 24/160 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K R M +YAFFVQ C+EEHKKK+P+ +V F+EF KKC+E WKT+ KEK +F +MA D
Sbjct: 8 KLRVEMLSYAFFVQTCQEEHKKKNPDASVKFSEFLKKCSEMWKTIFAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGVGDIAK 103
K Y+ EM++Y PP E R KIK ++P + D+ K
Sbjct: 68 KAHYEREMKTYIPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
+L W + + K YE+ A K K +Y+K++ AY+ + +
Sbjct: 128 KLAGMWNNTAAADKQFYEKKAAKLKEKYKKDIAAYRAKGM 167
>gi|171848741|pdb|2EQZ|A Chain A, Solution Structure Of The First Hmg-Box Domain From High
Mobility Group Protein B3
Length = 86
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 54/66 (81%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 20 MSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 79
Query: 73 TEMQSY 78
EM+ Y
Sbjct: 80 REMKDY 85
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
MA D K+ +M +Y R + K+ NPE V + +K+ ++W + K+K+
Sbjct: 8 MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 67
Query: 121 EQMAEKDKARYEKEMTAY 138
++MA+ DK RY++EM Y
Sbjct: 68 DEMAKADKVRYDREMKDY 85
>gi|189256|gb|AAC15850.1| non-histone chromosomal protein [Homo sapiens]
Length = 109
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 54/68 (79%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AYAFFVQ CREEHKK +PE V FAEFSKKC+ERWKTMS KEK +F EMA DK RYD
Sbjct: 13 MSAYAFFVQTCREEHKKXNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKADKVRYD 72
Query: 73 TEMQSYTP 80
EM+ Y P
Sbjct: 73 REMKDYGP 80
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV--GDIAKELGKKWADVDPSVKTKY 120
MA D K+ +M +Y R + K+ NPE V + +K+ ++W + K+K+
Sbjct: 1 MAKGDPKKPKGKMSAYAFFVQTCREEHKKXNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60
Query: 121 EQMAEKDKARYEKEMTAY 138
++MA+ DK RY++EM Y
Sbjct: 61 DEMAKADKVRYDREMKDY 78
>gi|313217945|emb|CBY41316.1| unnamed protein product [Oikopleura dioica]
gi|313245828|emb|CBY34818.1| unnamed protein product [Oikopleura dioica]
Length = 200
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 28/166 (16%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MPK+++ KPRGR TAY +FV +E+H K +P + F EFSK C ++W+T SE+++ F
Sbjct: 1 MPKDRN-KPRGRTTAYGYFVVDEKEKHAKANPGVKINFGEFSKLCGQKWQTKSEEDRIEF 59
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNP-------------------------E 95
+ A +DK RY+ EM SY PPAG K+ K ++ +P E
Sbjct: 60 EKKASEDKIRYEEEMASYEPPAGTKKTKKRKKDPNAPKRPATAFFLFSTANREKAKAQLE 119
Query: 96 YG--VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
G VGD+AK+LG+ W V K + ++A++ KA+Y+K M Y+
Sbjct: 120 EGAKVGDVAKKLGEMWKLVSAEEKENFAKIAKESKAKYDKAMEEYR 165
>gi|148699412|gb|EDL31359.1| mCG48752 [Mus musculus]
Length = 240
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 78/137 (56%), Gaps = 23/137 (16%)
Query: 25 EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGE 84
EEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK F +MA DK RY+ EM++Y P GE
Sbjct: 57 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGNFEDMAKADKARYEREMKTYIPHKGE 116
Query: 85 KRGKIKQDN-----------------------PEYGVGDIAKELGKKWADVDPSVKTKYE 121
+ K K N P +GD+AK+LGK W + K YE
Sbjct: 117 TKKKFKDPNAPKRPPLAFLFCSEYCPKITGKHPGLSIGDLAKKLGKMWHNTAADDKQPYE 176
Query: 122 QMAEKDKARYEKEMTAY 138
+ A K K +YEK + A+
Sbjct: 177 KKAAKLKEKYEKGIAAH 193
>gi|340370076|ref|XP_003383572.1| PREDICTED: high mobility group protein 1.2-like [Amphimedon
queenslandica]
Length = 211
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 93/177 (52%), Gaps = 36/177 (20%)
Query: 1 MPKEKD---VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEK 57
MP++ D KP+GR +AYAFFVQ +E + K ++ F EFSK C+E+WK M + +K
Sbjct: 1 MPRKSDKDPNKPKGRTSAYAFFVQDMKETPEGK----SLKFTEFSKYCSEQWKKMDDDDK 56
Query: 58 KRFHEMADKDKKRYDTEMQSY--TPP---------------------------AGEKRGK 88
+RF +++ +D+ RY EM Y T P + KR K
Sbjct: 57 QRFIDLSQEDRTRYKKEMAVYQKTAPAGGRGAGGRKKKDASLPKRNLSAFMFFSNAKRPK 116
Query: 89 IKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
IK NPE +G+IAK+LG W + P K YE+ A++DK RY++EM K P
Sbjct: 117 IKSQNPEASIGEIAKQLGAAWNVMTPEQKKPYEEQAKEDKLRYQEEMERIKEGGKVP 173
>gi|83004259|ref|XP_915281.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 188
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 78/137 (56%), Gaps = 23/137 (16%)
Query: 25 EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGE 84
EEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK F +MA DK RY+ EM++Y P GE
Sbjct: 5 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGNFEDMAKADKARYEREMKTYIPHKGE 64
Query: 85 KRGKIKQDN-----------------------PEYGVGDIAKELGKKWADVDPSVKTKYE 121
+ K K N P +GD+AK+LGK W + K YE
Sbjct: 65 TKKKFKDPNAPKRPPLAFLFCSEYCPKITGKHPGLSIGDLAKKLGKMWHNTAADDKQPYE 124
Query: 122 QMAEKDKARYEKEMTAY 138
+ A K K +YEK + A+
Sbjct: 125 KKAAKLKEKYEKGIAAH 141
>gi|444723313|gb|ELW63971.1| High mobility group protein B1 [Tupaia chinensis]
Length = 171
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 27/127 (21%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVV---FAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
M++YAFFVQ C EEHKKK PE + F+EFSKKC+ERWKTMS KEK + + A DK
Sbjct: 1 MSSYAFFVQTCWEEHKKKPPEASTSCFNFSEFSKKCSERWKTMSAKEKGKLEDTAKADKA 60
Query: 70 RYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKEL 105
RY+ EM++Y P GE R KIK++ P + D+AK+L
Sbjct: 61 RYEREMKTYIPSRGETKKKFKDPNAPKRPPLVFFLFCSEYRPKIKREQPGLTIDDVAKKL 120
Query: 106 GKKWADV 112
G+ W +
Sbjct: 121 GEMWNNT 127
>gi|441669023|ref|XP_004092092.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
Length = 204
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 91/165 (55%), Gaps = 23/165 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K K RG M++YAFFVQ C+ HKKK+P+ +V +EF KKC+E WKT+ KEK +F
Sbjct: 1 MGKGDSKKLRGEMSSYAFFVQTCQAVHKKKNPDASVNLSEFLKKCSEMWKTIFAKEKGKF 60
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEK-----------------------RGKIKQDNPEYG 97
MA DK Y+ EM++Y P GEK R KIK ++P
Sbjct: 61 EAMAKADKAHYEREMKTYIPSKGEKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLS 120
Query: 98 VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ D+ K+L + W + + K YE+ A K K +Y+K++ AY+ +
Sbjct: 121 IDDVVKKLAEMWNNTAAADKQFYEKKAAKLKEKYKKDIAAYRAKG 165
>gi|444731734|gb|ELW72082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 30/159 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFV H ++ + +EFS+KC+ERWKTMS KEK +F +MA D
Sbjct: 8 KPRGKMSSYAFFV------HTRRSTQMLQSTSEFSEKCSERWKTMSAKEKGKFEDMAKVD 61
Query: 68 KKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAK 103
K Y+ EM++Y PP GE R KIK ++P +GD+AK
Sbjct: 62 KACYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLPIGDVAK 121
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 122 KLGEMWINTAADEKQPYEKKAAKLKEKYEKDIAAYQAKG 160
>gi|444727982|gb|ELW68448.1| High mobility group protein B1 [Tupaia chinensis]
Length = 165
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 77/138 (55%), Gaps = 24/138 (17%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ E+HK+KHP+ +V F+EFSKK ERWKTMS KEK +F MA DK
Sbjct: 1 MSSYAFFVQTFWEKHKEKHPDASVDFSEFSKKFLERWKTMSAKEKGKFEAMAKVDKACDK 60
Query: 73 TEMQSYTPPAGEK------------------------RGKIKQDNPEYGVGDIAKELGKK 108
E+++Y PP GE R KIK ++P +GD+AK+LG+
Sbjct: 61 REVKTYIPPKGETKEKFTDPNAPKRPPSAFSLFCSEYRPKIKGEHPGLSIGDVAKKLGEM 120
Query: 109 WADVDPSVKTKYEQMAEK 126
W + K YE+ A K
Sbjct: 121 WNNTAADDKQPYEKKAAK 138
>gi|38018014|gb|AAR08136.1| high mobility group box protein HMGB2 [Suberites domuncula]
Length = 183
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 82/156 (52%), Gaps = 31/156 (19%)
Query: 11 GRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKR 70
GR +AYAF+VQ R+ ++K + VVFA FS++CAE WK + K+KK + +MA DK+R
Sbjct: 12 GRTSAYAFYVQERRDIYRKNG--DTVVFAPFSQECAELWKNV--KDKKAYQDMAAVDKER 67
Query: 71 YDTEMQSYTPP---------------------------AGEKRGKIKQDNPEYGVGDIAK 103
YD EM Y PP E+R K+K+ NP VGD+AK
Sbjct: 68 YDREMAEYVPPDDGEKSKKKKQKDKTKPKRSLTAFLFFCSEERPKMKEKNPGSSVGDLAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
LG KW + K + MA+ DK RY EM +K
Sbjct: 128 LLGAKWKGMSEDDKQPFSDMAQDDKDRYNDEMALWK 163
>gi|410980460|ref|XP_003996595.1| PREDICTED: high mobility group protein B1-like, partial [Felis
catus]
Length = 165
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 18/131 (13%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YA FVQ CREEH+KKHP+ +V F+ FSK+C+ERW+TMS KE+ +F + A D
Sbjct: 10 KPRGKMSSYALFVQTCREEHEKKHPDASVDFSGFSKRCSERWRTMSAKERGKFEDRAKTD 69
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTK-YEQMAEK 126
K IK ++P + D+AK+LG+ W + + + YE+ +
Sbjct: 70 KG-----------------ADIKGEHPGLSIDDVAKKLGEMWNNTTAADDQQPYEKRTPR 112
Query: 127 DKARYEKEMTA 137
K EK + A
Sbjct: 113 PKEECEKHIAA 123
>gi|407264363|ref|XP_358238.4| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 164
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 23/122 (18%)
Query: 25 EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGE 84
EEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK F +MA DK RY+ EM++Y P GE
Sbjct: 5 EEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGNFEDMAKADKARYEREMKTYIPHKGE 64
Query: 85 KRGKIKQDN-----------------------PEYGVGDIAKELGKKWADVDPSVKTKYE 121
+ K K N P +GD+AK+LGK W + K YE
Sbjct: 65 TKKKFKDPNAPKRPPLAFLFCSEYCPKITGKHPGLSIGDLAKKLGKMWHNTAADDKQPYE 124
Query: 122 QM 123
++
Sbjct: 125 KI 126
>gi|46326208|gb|AAS88235.1| high mobility group B1 protein [Schistosoma haematobium]
Length = 107
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 64/88 (72%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G M AYA F+Q R +HKKKHP + F FSK+C+E+WK +S KEKK+F ++A+KD
Sbjct: 7 KPKGAMNAYAAFLQSMRADHKKKHPNVTLDFKAFSKECSEQWKNLSAKEKKKFKDIAEKD 66
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPE 95
K+RY EM+ Y PPA E R K ++ +P+
Sbjct: 67 KERYRCEMEHYEPPADEGRSKKRKRDPD 94
>gi|355691926|gb|EHH27111.1| hypothetical protein EGK_17228 [Macaca mulatta]
Length = 196
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 83/155 (53%), Gaps = 35/155 (22%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+G+M+AY FFVQ CREE +FSKKC+ERWKTMS KEK + EMA DK
Sbjct: 9 PKGKMSAYVFFVQTCREE-------------QFSKKCSERWKTMSGKEKSKSDEMAKADK 55
Query: 69 KRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKELG 106
R D EM+ Y PP+G E K+K NP +GD+ K+LG
Sbjct: 56 VRCDQEMKGYGPAKGGKKKKDSNAPKRPPSGFFLFSSEFCPKMKSTNPGISIGDMVKKLG 115
Query: 107 KKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+ W +++ S K Y A K K +YEK++ K++
Sbjct: 116 EMWKNLNDSEKQPYITKAAKLKEKYEKDVADCKSK 150
>gi|340370210|ref|XP_003383639.1| PREDICTED: hypothetical protein LOC100632823 [Amphimedon
queenslandica]
Length = 436
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 91/182 (50%), Gaps = 35/182 (19%)
Query: 1 MPKEKD-VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
+P KD +PRGRMT YAFFVQ R E+ ++H V F FSK+C+ WK + + EK R
Sbjct: 113 VPPGKDRSRPRGRMTPYAFFVQE-RREYYRRH-GVPVEFTAFSKECSSLWKELKDDEKSR 170
Query: 60 FHEMADKDKKRYDTEMQSYTPPAG--------------------------------EKRG 87
F +M++ DK+R+ E SY G EKR
Sbjct: 171 FQKMSEDDKERFRKESASYHASLGQPYRDSNSKRGRKRKEPGQPKRNMCAFLHFCAEKRP 230
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVN 147
K++ ++P +G +AK+L W + P K YE MA +DK RYE++ AY+ A V
Sbjct: 231 KLRVESPAASIGALAKQLSLAWKVMTPDQKRPYEDMAMRDKLRYEQQKQAYEAGYSAAVT 290
Query: 148 EE 149
++
Sbjct: 291 QQ 292
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
KR ++ N VG +A+ L +W + PS K +++ MA KDK RYE ++ AY+
Sbjct: 361 KRPHLRAQNMTLRVGQLAQILAAQWKIMSPSEKKQFDDMARKDKERYEMQLKAYRKGEYI 420
Query: 145 PVNEEAD 151
P++++ D
Sbjct: 421 PMSDQHD 427
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+A+ F+ + R + ++ + + ++ A +WK MS EKK+F +MA KDK
Sbjct: 347 PKRNMSAFMFYSKAKRPHLRAQN--MTLRVGQLAQILAAQWKIMSPSEKKQFDDMARKDK 404
Query: 69 KRYDTEMQSY 78
+RY+ ++++Y
Sbjct: 405 ERYEMQLKAY 414
>gi|444714927|gb|ELW55801.1| High mobility group protein B1 [Tupaia chinensis]
Length = 167
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 63/86 (73%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ C+EEHKKKH + +V F+EFS++ +ERWKTMS KEK + +MA
Sbjct: 8 KPRGKMSSYAFFVQTCQEEHKKKHLDASVNFSEFSEELSERWKTMSAKEKGKLEDMAKAV 67
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN 93
K Y+ E+++Y P GE + K+ +
Sbjct: 68 KALYEREIKTYILPKGETKKMFKEPS 93
>gi|29290594|emb|CAD83017.1| bM168F16.1 (novel protein similar to high-mobility group box 1
(Hmgb1)) [Mus musculus]
gi|148699130|gb|EDL31077.1| mCG49535 [Mus musculus]
Length = 208
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 24/159 (15%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K RG+M+ EHK + + +V F+EFSKKC+ERWKTMS KEK +F +MA D
Sbjct: 8 KLRGKMSCICILYANLPGEHKTTYLDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKAD 67
Query: 68 KKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGVGDIAK 103
K Y+ EM++Y P GE + KIK ++P +G +AK
Sbjct: 68 KACYEREMKTYIPHKGETKKKFKDPNAPKRSPSAFFLFCSEYCHKIKGEHPGLSIGVVAK 127
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+LG+ W + K E+ A K K +YEK++ A + +
Sbjct: 128 KLGEMWINTAVYDKQPCEKKATKLKEKYEKDIAACRAKG 166
>gi|355766483|gb|EHH62519.1| hypothetical protein EGM_20887 [Macaca fascicularis]
Length = 198
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 35/157 (22%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ +M+AY FFVQ CREE +FSKKC+ERWKTMS KEK + EMA D
Sbjct: 8 KPKRKMSAYVFFVQTCREE-------------QFSKKCSERWKTMSGKEKSKSDEMAKAD 54
Query: 68 KKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGDIAKEL 105
K R D EM+ Y PP+G + K+K NP +GD+ K+L
Sbjct: 55 KVRCDQEMKGYGPAKGGKKKKDSNAPKRPPSGFFLFSSKFCPKMKSTNPGISIGDMVKKL 114
Query: 106 GKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
G+ W +++ S K Y A K K +YEK++ K++
Sbjct: 115 GEMWKNLNDSEKQPYITKAAKLKDKYEKDVADCKSKG 151
>gi|123368|sp|P07156.1|HMGB1_CRIGR RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|49483|emb|CAA68441.1| high mobility group protein [Cricetulus griseus]
Length = 180
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 24/131 (18%)
Query: 36 VVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEK---------- 85
V F+EFSKKC+ERWKTMS KEK +F +MA DK RY+ EM++Y PP GE
Sbjct: 1 VNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAP 60
Query: 86 --------------RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARY 131
R KIK ++P +GD+AK+LG+ W + K YE+ A K K +Y
Sbjct: 61 KRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKY 120
Query: 132 EKEMTAYKNRS 142
EK++ AY+ +
Sbjct: 121 EKDIAAYRAKG 131
>gi|397482786|ref|XP_003812597.1| PREDICTED: high mobility group protein B4 [Pan paniscus]
Length = 177
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ V K YEQ A +A+Y +E+ Y+ + A
Sbjct: 121 VQVAKATGKMWSTVTDLEKHPYEQRAALLRAKYFEELELYRKQCNA 166
>gi|332808386|ref|XP_513298.3| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4 [Pan
troglodytes]
Length = 186
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ V K YEQ A +A+Y +E+ Y+ + A
Sbjct: 121 VQVAKATGKMWSTVTDLEKHPYEQRAALLRAKYFEELELYRKQCNA 166
>gi|12838247|dbj|BAB24141.1| unnamed protein product [Mus musculus]
Length = 181
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 23/161 (14%)
Query: 4 EKD-VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
EKD ++P+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 EKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 63 MADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGD 100
+A+ DK RY EM +Y PP+ + +KQ+NP++ V
Sbjct: 63 LAEHDKARYQQEMMNYIGKRRKRRKRDPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVVQ 122
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+AK GK W+ D + K YEQ A +A+Y +E AY+N+
Sbjct: 123 VAKAAGKMWSTTDEAEKKPYEQKAALMRAKYFEEQEAYRNQ 163
>gi|444707322|gb|ELW48604.1| High mobility group protein B4 [Tupaia chinensis]
Length = 189
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE V+P+ +++Y F+ R + K++ P + F EFS+KC+E+WK++S+ EK ++
Sbjct: 3 MGKEIQVRPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWKSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 63 EALAKLDKARYQEEMMNYVGRRRKRRKRDPQAPRRPPSSFILFCQDHYAQLKRENPSWTV 122
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK GK W + K YEQ A +ARY++E+ Y+
Sbjct: 123 VQVAKASGKMWTVMTAVEKQPYEQRAALLRARYQEELEVYR 163
>gi|148277100|ref|NP_081312.2| high mobility group protein B4 [Mus musculus]
gi|81892334|sp|Q6P8W9.1|HMGB4_MOUSE RecName: Full=High mobility group protein B4
gi|38174595|gb|AAH61030.1| High-mobility group box 4 [Mus musculus]
gi|148698295|gb|EDL30242.1| high-mobility group box 4 [Mus musculus]
Length = 181
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 23/161 (14%)
Query: 4 EKD-VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
EKD ++P+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 EKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKYEA 62
Query: 63 MADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGVGD 100
+A+ DK RY EM +Y PP+ + +KQ+NP++ V
Sbjct: 63 LAELDKARYQQEMMNYIGKRRKRRKRDPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVVQ 122
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+AK GK W+ D + K YEQ A +A+Y +E AY+N+
Sbjct: 123 VAKAAGKMWSTTDEAEKKPYEQKAALMRAKYFEEQEAYRNQ 163
>gi|301763549|ref|XP_002917185.1| PREDICTED: high mobility group protein B4-like [Ailuropoda
melanoleuca]
Length = 193
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE ++P+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 MGKEIQLRPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 63 EALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 122
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ + K YEQ A +A+Y++E+ Y+ + +A
Sbjct: 123 VQVAKASGKMWSATTDAEKQPYEQRAALLRAKYQEELEIYRKQRIA 168
>gi|344244771|gb|EGW00875.1| High mobility group protein B1 [Cricetulus griseus]
Length = 109
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 52/68 (76%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE KPRG+M++YAFFVQ CREEHKKKHP+ +V +EFS KC+ER KTM KEK +F
Sbjct: 1 MGKEDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNLSEFSNKCSERRKTMPAKEKGKF 60
Query: 61 HEMADKDK 68
+MA DK
Sbjct: 61 EDMAKADK 68
>gi|148693352|gb|EDL25299.1| mCG18380 [Mus musculus]
Length = 83
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWKTM KE+ +F ++ +
Sbjct: 15 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMFAKERGKFEDICQQR 74
Query: 68 KKRY 71
R
Sbjct: 75 LTRL 78
>gi|281349442|gb|EFB25026.1| hypothetical protein PANDA_005395 [Ailuropoda melanoleuca]
Length = 181
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE ++P+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEIQLRPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ + K YEQ A +A+Y++E+ Y+ + +A
Sbjct: 121 VQVAKASGKMWSATTDAEKQPYEQRAALLRAKYQEELEIYRKQRIA 166
>gi|426215132|ref|XP_004001831.1| PREDICTED: high mobility group protein B4 [Ovis aries]
Length = 196
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 28/166 (16%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +KP+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 MGKRDHLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K +NP + V
Sbjct: 63 EALAKLDKARYQEEMMNYLGRRKKRRKRDPHAPRRPPSSFLLFCQDHYAQLKSENPSWSV 122
Query: 99 GDIAKELGKKWA---DVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+AK GK W+ DVD K YEQ A +A+Y +E++ Y+N+
Sbjct: 123 VQVAKASGKMWSAKTDVD---KQPYEQRAALLRAKYREELSVYRNQ 165
>gi|67968790|dbj|BAE00752.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R E K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 MGKEIQLKPKANVSSYIHFLLNYRNEFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 63 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSV 122
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK GK W+ K YEQ A +A+Y +E+ Y+
Sbjct: 123 VQVAKATGKMWSATADLEKHPYEQRAALLRAKYFEELELYR 163
>gi|94966915|ref|NP_001035652.1| high mobility group protein B4 [Bos taurus]
gi|119370723|sp|Q32L34.1|HMGB4_BOVIN RecName: Full=High mobility group protein B4
gi|81673105|gb|AAI09791.1| High-mobility group box 4 [Bos taurus]
gi|296488916|tpg|DAA31029.1| TPA: high mobility group protein B4 [Bos taurus]
Length = 194
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 28/166 (16%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K +KP+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKRDQLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K +NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYFGRRKKRRKRDPHAPRRPPSSFLLFCQDHYAQLKSENPSWSV 120
Query: 99 GDIAKELGKKWA---DVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+AK GK W+ DVD K YEQ A +A+Y +E++ Y+N+
Sbjct: 121 VQVAKASGKMWSAKTDVD---KQPYEQRAALLRAKYREELSVYRNQ 163
>gi|345780695|ref|XP_851529.2| PREDICTED: high mobility group protein B4 [Canis lupus familiaris]
Length = 193
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE ++P+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 MGKEIQLRPKVNVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 63 EALAKLDKARYQEEMMNYVGKKKKRRKRDPQAPRRPPSSFLIFCQDHYAQLKRENPTWSV 122
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK G+ W+ + K YEQ A +ARY++E+ Y+
Sbjct: 123 VQVAKASGRMWSVTSGAEKQPYEQRAAVLRARYQEELEVYR 163
>gi|148701926|gb|EDL33873.1| mCG1037808 [Mus musculus]
Length = 72
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 46/53 (86%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
K RG+M+ YAFFVQ+CREEHKKKHP+ +V F+EFSKKC+ERWKTMS KEK F
Sbjct: 8 KLRGKMSLYAFFVQICREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGEF 60
>gi|403293162|ref|XP_003937591.1| PREDICTED: high mobility group protein B4 [Saimiri boliviensis
boliviensis]
Length = 254
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 64 MGKEIQLKPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 123
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 124 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 183
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK GK W+ K YEQ A +A+Y +E+ Y+
Sbjct: 184 VQVAKATGKMWSATTDLEKQPYEQRAALLRAKYFEELELYR 224
>gi|444725105|gb|ELW65684.1| High mobility group protein B1 [Tupaia chinensis]
Length = 166
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 76/127 (59%), Gaps = 12/127 (9%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++Y FFVQ C EEHKK+HP+ +V F+EFSKKC+ERWKTMS EK +F + A
Sbjct: 1 MSSYTFFVQTCWEEHKKQHPDASVNFSEFSKKCSERWKTMSANEKAKFEDTA-------- 52
Query: 73 TEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
+S++ K K + + D+AK+LG+ W + K YE+ A K K +YE
Sbjct: 53 ---KSFSCYVLNITQKPKSTSWTFHC-DVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 108
Query: 133 KEMTAYK 139
K++ AY+
Sbjct: 109 KDIAAYR 115
>gi|157822723|ref|NP_001102933.1| high mobility group protein B4 [Rattus norvegicus]
gi|149023997|gb|EDL80494.1| rCG31445 [Rattus norvegicus]
Length = 181
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 22/160 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+ ++P+ +++Y F+ R + K++ P + F EFS++C+E+W+++S+ EK +F
Sbjct: 1 MGKKVQLRPKVNVSSYIHFMINFRNKFKEQQPNTYLTFNEFSRRCSEKWRSISKNEKAKF 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + K+KQ+NP + V
Sbjct: 61 EAIAKLDKARYQEEMMNYVGKRRKRRKRDPLAPRKPPSSFLLFSLDHFAKLKQENPNWTV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+AK GK W+ + K YEQ A +A+Y +E AY
Sbjct: 121 VQVAKAAGKMWSMITDVDKRPYEQKAAIMRAKYFQEREAY 160
>gi|410966739|ref|XP_003989887.1| PREDICTED: high mobility group protein B4 [Felis catus]
Length = 193
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +++P+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 MGKEIELRPKANVSSYIHFLLNYRNKFKEQQPNTYLSFKEFSRKCSEKWRSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 63 EALAKLDKARYQEEMMNYGGKKKKRRKRDPYAPRRPPSSFLLFCQDHYAQLKRENPNWSV 122
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK GK W+ + K YEQ A +A+Y++++ Y+
Sbjct: 123 VQVAKASGKMWSATTGAEKQPYEQRAALLRAKYQEDLEIYR 163
>gi|109001746|ref|XP_001107984.1| PREDICTED: high mobility group protein B4-like [Macaca mulatta]
gi|67968844|dbj|BAE00779.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 MGKEIQLKPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 63 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSV 122
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK GK W+ K YEQ A +A+Y +E+ Y+
Sbjct: 123 VQVAKATGKMWSATTDLEKHPYEQRAALLRAKYFEELELYR 163
>gi|444524683|gb|ELV13903.1| High mobility group protein B2 [Tupaia chinensis]
Length = 104
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
RG++ +YAFF+Q CREEHKKKHP+ +V F +FSKKC+ERWKTMS KEK +F +MA
Sbjct: 10 RGKVPSYAFFMQTCREEHKKKHPDSSVNFVKFSKKCSERWKTMSAKEKSKFEDMA 64
>gi|297665615|ref|XP_002811141.1| PREDICTED: high mobility group protein B4 [Pongo abelii]
Length = 189
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFEEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYVGKTKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK GK W+ K YEQ A +A+Y +E+ Y+
Sbjct: 121 VQVAKATGKMWSAATDLEKHPYEQRAALLRAKYFEELELYR 161
>gi|57232750|ref|NP_660206.2| high mobility group protein B4 [Homo sapiens]
gi|387912835|sp|Q8WW32.2|HMGB4_HUMAN RecName: Full=High mobility group protein B4
gi|189065201|dbj|BAG34924.1| unnamed protein product [Homo sapiens]
gi|208968483|dbj|BAG74080.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ K YEQ +A+Y +E+ Y+ + A
Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNA 166
>gi|18088957|gb|AAH21180.1| High-mobility group box 4 [Homo sapiens]
gi|312150396|gb|ADQ31710.1| high-mobility group box 4 [synthetic construct]
Length = 186
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPSTYVGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ K YEQ +A+Y +E+ Y+ + A
Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNA 166
>gi|110808604|gb|ABB22048.1| HMBG4 [Homo sapiens]
gi|119627858|gb|EAX07453.1| high-mobility group box 4 [Homo sapiens]
Length = 186
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ K YEQ +A+Y +E+ Y+ + A
Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNA 166
>gi|426328852|ref|XP_004065350.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B4
[Gorilla gorilla gorilla]
Length = 186
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ K YEQ +A+Y +E+ Y+ + A
Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNA 166
>gi|402853838|ref|XP_003891595.1| PREDICTED: high mobility group protein B4 [Papio anubis]
Length = 191
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R + K++ P V F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 MGKEIQLKPKANVSSYIHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 63 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPSWSV 122
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK GK W+ K YEQ A +A+Y +E+ Y+
Sbjct: 123 VQVAKATGKMWSATTDLEKHPYEQRAALLRAKYFEELERYR 163
>gi|297265082|ref|XP_001112681.2| PREDICTED: nuclear autoantigen Sp-100 isoform 9 [Macaca mulatta]
Length = 838
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 24/144 (16%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
V C EEH+KK+P+ +V F+EF KKC+E WKT+ KE+ +F + A DK RY+ EM++
Sbjct: 660 LVDPC-EEHEKKNPDASVDFSEFVKKCSEMWKTIFAKERGKFEDTAKADKARYEREMKTR 718
Query: 79 TPPAGEK-----------------------RGKIKQDNPEYGVGDIAKELGKKWADVDPS 115
PP GEK R KIK ++P + + K+L + W + +
Sbjct: 719 IPPKGEKKKFKDPSAPRRPPLAFFMFCSKNRPKIKGEHPGLSIDGVVKKLAEMWNNTAVA 778
Query: 116 VKTKYEQMAEKDKARYEKEMTAYK 139
K Y+++A K K +Y+K++ AY+
Sbjct: 779 DKQFYKKVAAKLKEKYKKDIAAYR 802
>gi|444727393|gb|ELW67891.1| High mobility group protein B3 [Tupaia chinensis]
Length = 102
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPR +M+AYAFFVQ CREE KKK PE V FAEFSK ++RWKTMS K+K +F EMA D
Sbjct: 8 KPRVKMSAYAFFVQTCREEDKKKDPEILVNFAEFSKS-SKRWKTMSGKKKLKFDEMAKVD 66
Query: 68 KKRYDTEMQSYTP 80
K R D +M+ Y P
Sbjct: 67 KVRCDWKMKDYGP 79
>gi|395732940|ref|XP_002813012.2| PREDICTED: nuclear autoantigen Sp-100-like [Pongo abelii]
Length = 263
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 25/148 (16%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
V C EEHKKK+P+ +V F+EF KKC+E WKT+ KEK +F +MA DK Y+ EM++Y
Sbjct: 79 LVDPC-EEHKKKNPDASVKFSEFLKKCSEIWKTIFAKEKGKFEDMAKADKAHYEREMKTY 137
Query: 79 TPP------------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
P E R KIK ++P + D+ K+L W +
Sbjct: 138 IPLKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAA 197
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ K YE A + K +Y+K++ AY+ +
Sbjct: 198 ADKQFYENKAARLKEKYKKDIAAYRAKG 225
>gi|332254661|ref|XP_003276450.1| PREDICTED: high mobility group protein B4 [Nomascus leucogenys]
Length = 189
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ R K++ P V F EFS+KC+E W+++S+ EK ++
Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNTFKEQQPNTYVGFKEFSRKCSEEWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K++NP + V
Sbjct: 61 EALAKVDKARYQEEMMNYVGKRKKRRKRDPQAPRRPPSSFLLFCQDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK G+ W+ K YEQ A +A+Y +E+ Y+
Sbjct: 121 VQVAKATGEMWSTTTDLEKHPYEQRAALLRAKYFEELELYR 161
>gi|335308835|ref|XP_003361389.1| PREDICTED: high mobility group protein B4-like [Sus scrofa]
Length = 198
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE +KP+ +++Y F+ + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 3 MGKEIQLKPKANVSSYIHFLLNYSNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKY 62
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM++Y PP+ + ++K++NP + V
Sbjct: 63 EALAKLDKARYQEEMRNYVGGKRKRRKRDPQAPRRPPSSFLLFCQDNYAQLKRENPNWSV 122
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK + W+ K YEQ A +A+Y +E++ Y+
Sbjct: 123 AQVAKASARMWSTTTDVDKQPYEQRAALLRAKYHEELSVYQ 163
>gi|351707903|gb|EHB10822.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 157
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 2 PKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
PKE P GR ++ AF VQ CREEHKKKHP+ + F+E SKKC+ERWKTMS KEK
Sbjct: 14 PKE----PGGRTSSRAFLVQTCREEHKKKHPDSSANFSELSKKCSERWKTMSAKEKGTLE 69
Query: 62 EMADKDKKRYDTEMQSY 78
+MA DK + E ++
Sbjct: 70 DMAKADKAQSAKEKGTF 86
>gi|354476918|ref|XP_003500670.1| PREDICTED: high mobility group protein B4-like [Cricetulus griseus]
Length = 180
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 22/161 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M KE ++P+ +++Y F+ R + K++ P + F EFS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKEVQLRPKVNVSSYIHFMLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM +Y PP+ + ++K DNP + V
Sbjct: 61 EALAKLDKARYQEEMMNYMGKRRKRRKRDPHAPRQPPSSFLLFSLDHYAQLKHDNPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+AK GK W+ K YEQ A +A+Y +++ Y+
Sbjct: 121 VQVAKATGKMWSMTSNVDKQPYEQKAALLRAKYFEDVENYR 161
>gi|444730956|gb|ELW71325.1| High mobility group protein B2 [Tupaia chinensis]
Length = 273
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 71/142 (50%), Gaps = 29/142 (20%)
Query: 21 QVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYT- 79
+ C EEHKKKHP+ +V F EFSKKC+ERWKTMS KEK +F +M DK R D EM++Y
Sbjct: 92 KACLEEHKKKHPDSSVNFPEFSKKCSERWKTMSAKEKLKFEDMTKSDKVRCDREMKNYVP 151
Query: 80 -----------------PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSV 116
PP+ E KIK + P + D AK W +
Sbjct: 152 PKGDKKGKKKDPSAPKRPPSAFFLFCSEHCPKIKSEYPGLSIEDTAKN----WVTCGLNS 207
Query: 117 KTKYEQMAEKDKARYEKEMTAY 138
++ EQ K K +Y K + AY
Sbjct: 208 QS-CEQKVAKLKEKYVKNIAAY 228
>gi|444729826|gb|ELW70229.1| High mobility group protein B3 [Tupaia chinensis]
Length = 108
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 50/72 (69%)
Query: 12 RMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRY 71
RM+ F + CREEHKKK E V FAEFSKKC+ERWKT+SEKEK +F +MA DK RY
Sbjct: 13 RMSMKNLFDETCREEHKKKDLEVPVNFAEFSKKCSERWKTVSEKEKSKFDKMAKADKVRY 72
Query: 72 DTEMQSYTPPAG 83
D EM+ Y G
Sbjct: 73 DREMKDYGLAKG 84
>gi|351699672|gb|EHB02591.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 104
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 44/50 (88%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEK 57
KPRG+M++Y F VQ CREEHKKKHP+ +V F+EFSKKC+ERWKTMS ++K
Sbjct: 8 KPRGKMSSYTFLVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSLEKK 57
>gi|397475678|ref|XP_003809257.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
Length = 165
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 68/122 (55%), Gaps = 20/122 (16%)
Query: 40 EFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYT--------------PPAG-- 83
EFSKKC+ERWKTMS KEK +F EMA DK D EM+ PP+G
Sbjct: 19 EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHRDREMKGPAKGGKKKKDPSAPKRPPSGFF 78
Query: 84 ----EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
E R KIK NP VGD+AK+LG+ W +++ S K Y A K K +YEK++ K
Sbjct: 79 LFSSEIRPKIKSTNPGISVGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADSK 138
Query: 140 NR 141
++
Sbjct: 139 SK 140
>gi|256082821|ref|XP_002577651.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|350644470|emb|CCD60807.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 116
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ M AYA F+Q R HKKKHP + F FSK+C+E+WK S KEKK F ++A+KD
Sbjct: 7 RPKSAMNAYAAFLQSMRANHKKKHPNVTLDFKSFSKECSEQWKNQSAKEKK-FKDLAEKD 65
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPE 95
K+RY EM+ Y PP E K ++ +P+
Sbjct: 66 KERYRCEMEHYEPPTDEGCSKKRKRDPD 93
>gi|119601131|gb|EAW80725.1| hCG22229 [Homo sapiens]
Length = 212
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 25/146 (17%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M++YAFFVQ CREEHK H + +V F++ +WKTMS KEK +F MA DK Y+
Sbjct: 1 MSSYAFFVQSCREEHKHHHSDASVNFSK------RKWKTMSAKEKGKFENMAKADKVHYE 54
Query: 73 TEMQSYTPPAGEKRGKIKQDN-------------------PEYGVGDIAKELGKKWADVD 113
EM++Y PP E + K K N P GD+AK+LG+ +
Sbjct: 55 REMKTYIPPKQETKKKFKDPNAPKRPPFSLSTAQKSKGEHPGQSTGDVAKKLGEMRTNSA 114
Query: 114 PSVKTKYEQMAEKDKARYEKEMTAYK 139
K YE+ A K K +Y K+ Y+
Sbjct: 115 ADDKWPYEKKAAKLKEKYRKDTAVYR 140
>gi|444730059|gb|ELW70455.1| High mobility group protein B1 [Tupaia chinensis]
gi|444730060|gb|ELW70456.1| High mobility group protein B1 [Tupaia chinensis]
Length = 177
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 24/128 (18%)
Query: 39 AEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKR------------ 86
++FSKKC+ERWKTMS KEK +F +MA DK Y+ EM++Y PP GE +
Sbjct: 6 SQFSKKCSERWKTMSAKEKGKFEDMAKADKTYYEREMKTYIPPKGETKKKFKDPNAPKRP 65
Query: 87 ------------GKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
KIK ++P +GD+AK+LG+ W + K YE+ A K K +YE++
Sbjct: 66 PLAFFFFCSEYCPKIKGEHPGLSIGDVAKKLGEMWNNTAAGDKQPYEKKAAKLKEKYERD 125
Query: 135 MTAYKNRS 142
+ AY+ +
Sbjct: 126 IAAYRAKG 133
>gi|444723820|gb|ELW64450.1| MKL/myocardin-like protein 1 [Tupaia chinensis]
Length = 1207
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+++AFFVQ C EEHKK + + +V +EFSKKC+ERWKT S KE +F +MA DK Y+
Sbjct: 1 MSSFAFFVQSCWEEHKK-NLDASVNLSEFSKKCSERWKTKSAKENGKFEDMAKADKVHYE 59
Query: 73 TEMQSYTPPAGEKRGKIK 90
EM++Y PP GE K
Sbjct: 60 REMKTYIPPNGETVATTK 77
>gi|221120410|ref|XP_002166637.1| PREDICTED: high mobility group-T protein-like [Hydra
magnipapillata]
gi|388594888|gb|AFK74879.1| transcription factor HMG-B3b [Hydra vulgaris]
Length = 177
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 37/169 (21%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G T++ F + R + +K E EF+K+ WK MS++EKK + ++A +D
Sbjct: 10 KPKGAKTSFIIFGEKTRADRLEKG-ETIPTQTEFAKELGNLWKEMSKEEKKPYLDLAAED 68
Query: 68 KKRYDTEMQSYTPP------------------------------------AGEKRGKIKQ 91
KKR+ EM+ Y PP A R K+K
Sbjct: 69 KKRFQKEMEGYNPPSDSESDDEDKEPKKKKKRAKKDPNAPKRNVSAYFHFASAIRPKLKA 128
Query: 92 DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
DNP GV ++AK +G++W + S K YE +A KD+ RY++E++ Y +
Sbjct: 129 DNPTLGVTELAKMIGERWQKLTDSDKKPYENLAAKDRDRYQRELSEYNS 177
>gi|226372116|gb|ACO51683.1| High mobility group protein B1 [Rana catesbeiana]
Length = 61
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 41/45 (91%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTM 52
KPRG+M++YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK M
Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKVM 52
>gi|358336016|dbj|GAA37866.2| high mobility group protein B1 [Clonorchis sinensis]
Length = 174
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 30/123 (24%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAG---------------------------- 83
M+ KEKKRF ++A DK+R++ EM Y PP G
Sbjct: 1 MTPKEKKRFEDLAALDKERFNREMSDYVPPEGMKKGKKRKVPRDPGLPRRAWSAFFFFCD 60
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
E RGK+K++NPE+ V D+AKELG++W K KYE +A++DK RYE++M Y+
Sbjct: 61 EHRGKVKENNPEFKVADVAKELGRQWEAC--QDKAKYELLAQQDKQRYEEDMVKYRAGVY 118
Query: 144 APV 146
PV
Sbjct: 119 VPV 121
>gi|392332176|ref|XP_003752498.1| PREDICTED: uncharacterized protein LOC686084 [Rattus norvegicus]
Length = 1769
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 32/155 (20%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G ++ AFF Q CR+EHK+ V F EF KK ERWKT+S KE+ +F ++A +
Sbjct: 7 KPQGAKSSKAFFPQTCRKEHKR-LASSPVNFREFXKKSPERWKTISAKEESKFEDLAKSN 65
Query: 68 KKRYDTEMQSYTPPAGEKRGK------------------------IKQDNPEYGVGDIAK 103
RYD E G+K+GK IK + P +GD A+
Sbjct: 66 XARYDRE-------KGDKKGKEEDPNARKGPPTAFFLFCSEHLPEIKSERPGLSIGDTAR 118
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+LG+ W++ K YE+ A K + EK++ AY
Sbjct: 119 KLGEMWSEQSVKDKQPYERRAAKLREACEKDIAAY 153
>gi|308153455|sp|Q3SYE8.2|HMG3L_HUMAN RecName: Full=Putative high mobility group protein B3-like-1;
AltName: Full=High mobility group protein 4-like;
AltName: Full=High mobility group protein B3 pseudogene
1
Length = 73
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M + K RG+M+A+AFFVQ CREEHKK +PE V FAEFSKKC+ERWKTMS KEK R
Sbjct: 1 MARSDPRKLRGKMSAFAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKTMSGKEKSRL 59
Query: 61 HEMA 64
A
Sbjct: 60 GTAA 63
>gi|392343469|ref|XP_003754892.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|392351669|ref|XP_003750991.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|392356176|ref|XP_003752256.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 22/160 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+ V+P+ ++ Y F+ R + +++ P F EFS+KC+E+WKT+S+KEKK++
Sbjct: 1 MGKDSKVRPKVNVSPYVHFMMDFRNQMREQQPNIYYDFTEFSRKCSEKWKTISKKEKKKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A +DK RY EM++Y+ PP+ + +IK+ +P + V
Sbjct: 61 EALAKRDKDRYQREMRNYSGPRRERRRRDADAPRKPPSSFLLFSQDHFDEIKEQHPNWTV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
G +AK G+ WA + K YE+ A +A+Y +E AY
Sbjct: 121 GQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY 160
>gi|395857899|ref|XP_003801318.1| PREDICTED: high mobility group protein B4 [Otolemur garnettii]
Length = 187
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 22/166 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K ++P+ +++Y F+ R + K++ P V F +FS+KC+E+W+++S+ EK ++
Sbjct: 1 MGKGVQLRPKVNVSSYIHFLLNYRNKFKEQQPNTYVGFKDFSRKCSEKWRSISKHEKAKY 60
Query: 61 HEMADKDKKRYDTEMQSY----------------TPPAG------EKRGKIKQDNPEYGV 98
+A DK RY EM Y PP+ + ++K++NP + V
Sbjct: 61 EALAKLDKARYQEEMMHYDGKRKKRRKKDPQAPRRPPSSFLLFCKDHYAQLKRENPNWSV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+AK GK W+ + K YE+ A +A+Y++E+ Y+ + A
Sbjct: 121 VQVAKASGKMWSLSTNAEKQPYEERAALLRAKYQEELQIYRRQCNA 166
>gi|109510329|ref|XP_001076590.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|293351208|ref|XP_002727725.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 22/160 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+ V+P+ ++ Y F+ R + +++ P F EFS+KC+E+WKT+S+KEKK++
Sbjct: 1 MGKDSKVRPKVNVSPYVHFMMDFRNQMREQQPNIYYDFTEFSRKCSEKWKTISKKEKKKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A +DK RY EM++Y+ PP+ + +IK+ +P + V
Sbjct: 61 EALAKRDKDRYQREMRNYSGPRRERRRRDADAPRKPPSSFLLFSQDHFDEIKEQHPNWTV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
G +AK G+ WA + K YE+ A +A+Y +E AY
Sbjct: 121 GQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY 160
>gi|293351259|ref|XP_002727736.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 22/160 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+ V+P+ ++ Y F+ R + +++ P F EFS+KC+E+WKT+S+KEKK++
Sbjct: 1 MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A +DK RY EM++YT PP+ + +IK+ +P + V
Sbjct: 61 EALAKRDKDRYQREMRNYTGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+AK G+ WA + K YE+ A +A+Y +E AY
Sbjct: 121 AQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY 160
>gi|119591335|gb|EAW70929.1| SP100 nuclear antigen, isoform CRA_c [Homo sapiens]
Length = 844
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 25/145 (17%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
V C EEHKKK+P+ +V F+EF KKC+E WKT+ KEK +F +MA DK Y+ EM++Y
Sbjct: 659 LVDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTY 717
Query: 79 TPP------------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
PP E R KIK ++P + D+ K+L W +
Sbjct: 718 IPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAA 777
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYK 139
+ K YE+ A K K +Y+K++ AY+
Sbjct: 778 ADKQFYEKKAAKLKEKYKKDIAAYR 802
>gi|355691554|gb|EHH26739.1| hypothetical protein EGK_16793, partial [Macaca mulatta]
Length = 136
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++Y FFVQ C+E+HK++ +N + AE + + K K++ +MA
Sbjct: 8 KPRGKMSSYIFFVQTCQEQHKRR-TSQNFLSAEMN------GRPCLPKRKEKCEDMAMTY 60
Query: 68 KKRYDTEMQSYTPPAGE-----KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQ 122
+ Y EM++Y PP GE R KIK ++P GD+A +LG+ + K Y +
Sbjct: 61 EAYYKREMKTYIPPEGETKKFKNRSKIKGEHPGLSTGDVATKLGEMYNSTAADDKQPYGK 120
Query: 123 MAEKDKARYEKEMTAY 138
A K +YEK TAY
Sbjct: 121 KAAKLLGKYEKHTTAY 136
>gi|62822330|gb|AAY14879.1| unknown [Homo sapiens]
Length = 843
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 25/145 (17%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
V C EEHKKK+P+ +V F+EF KKC+E WKT+ KEK +F +MA DK Y+ EM++Y
Sbjct: 658 LVDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTY 716
Query: 79 TPP------------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
PP E R KIK ++P + D+ K+L W +
Sbjct: 717 IPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAA 776
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYK 139
+ K YE+ A K K +Y+K++ AY+
Sbjct: 777 ADKQFYEKKAAKLKEKYKKDIAAYR 801
>gi|444732357|gb|ELW72657.1| High mobility group protein B1 [Tupaia chinensis]
Length = 88
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
M++YAFF Q C+EEHKKKHP+ +V F+EFSKKC+ERWKTM KEK +F +MA
Sbjct: 1 MSSYAFFAQACQEEHKKKHPDASVNFSEFSKKCSERWKTMFAKEKGKFEDMA 52
>gi|345307490|ref|XP_001507075.2| PREDICTED: high mobility group protein B2-like [Ornithorhynchus
anatinus]
Length = 141
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 39/44 (88%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKT 51
KPRG+M++YAFFVQ CREEHKKKHP+ V FA+FS+KC+ERWK
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDSLVNFADFSRKCSERWKV 51
>gi|19923236|ref|NP_003104.2| nuclear autoantigen Sp-100 isoform 2 [Homo sapiens]
gi|13878931|sp|P23497.3|SP100_HUMAN RecName: Full=Nuclear autoantigen Sp-100; AltName: Full=Lysp100b;
AltName: Full=Nuclear dot-associated Sp100 protein;
AltName: Full=Speckled 100 kDa
gi|3252911|gb|AAC39790.1| SP100-HMG nuclear autoantigen [Homo sapiens]
gi|119591334|gb|EAW70928.1| SP100 nuclear antigen, isoform CRA_b [Homo sapiens]
Length = 879
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 25/145 (17%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
V C EEHKKK+P+ +V F+EF KKC+E WKT+ KEK +F +MA DK Y+ EM++Y
Sbjct: 694 LVDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTY 752
Query: 79 TPP------------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
PP E R KIK ++P + D+ K+L W +
Sbjct: 753 IPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAA 812
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYK 139
+ K YE+ A K K +Y+K++ AY+
Sbjct: 813 ADKQFYEKKAAKLKEKYKKDIAAYR 837
>gi|167536391|ref|XP_001749867.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771582|gb|EDQ85246.1| predicted protein [Monosiga brevicollis MX1]
Length = 197
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 30/160 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ +AY FF Q R + K +P++ + + SK W+ MS+ KK + EMA +D
Sbjct: 37 KPKNAQSAYMFFSQKVRPQFSKDNPDKKMT--DVSKLIGAAWREMSDAAKKPYEEMARRD 94
Query: 68 KKRYDTEMQSYTPPAGE---KRGKIKQD-------------------------NPEYGVG 99
K+RY +M +Y PP KRGK ++D N V
Sbjct: 95 KQRYQHQMATYVPPPTRELGKRGKRRKDPDAPKKPLTAYFLYAADRRAALRAQNRNATVA 154
Query: 100 DIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
DIAK +G +W D+ +VK Y+ A++ K++Y+KE+ YK
Sbjct: 155 DIAKIIGAEWKDLSDAVKKPYQDRADRLKSQYQKEVELYK 194
>gi|23396868|sp|Q9N1Q6.1|SP100_GORGO RecName: Full=Nuclear autoantigen Sp-100; AltName: Full=Nuclear
dot-associated Sp100 protein; AltName: Full=Speckled 100
kDa
gi|7239185|gb|AAF43109.1|AF169947_1 SP100-HMG nuclear autoantigen, partial [Gorilla gorilla]
Length = 225
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 25/149 (16%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
V C EEHKKK+P+ +V F+EF KKC+E WKT+ KEK +F +MA DK Y+ EM++Y
Sbjct: 43 LVDPC-EEHKKKNPDASVKFSEFLKKCSEMWKTIFAKEKGKFEDMAKADKAHYEREMKTY 101
Query: 79 TPP------------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
PP E R KIK ++P + D+ K+L W +
Sbjct: 102 IPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAA 161
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
+ K YE+ A K K +Y+K++ AY+ + +
Sbjct: 162 ADKQFYEKKAAKLKEKYKKDIAAYRAKGM 190
>gi|392343504|ref|XP_003754904.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|392356039|ref|XP_003752197.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 22/160 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+ V+P+ ++ Y F+ R + +++ P F EFS+KC+E+W+T+SE+EK+++
Sbjct: 1 MGKDSKVRPKVNVSPYVHFMMDFRNQMREQQPNSYYDFTEFSRKCSEKWRTISEQEKRKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A +D+ RY EM++YT PP+ + +IK+ +P + V
Sbjct: 61 EALAKRDRDRYQREMRNYTGPRRERRRRDPNAPRKPPSSFLLFSMDHFDEIKEQHPNWTV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+AK + W+ K+ Y + A +A+Y +E AY
Sbjct: 121 AQVAKAAKRMWSRCSEVDKSHYVEKAAILRAKYLEEREAY 160
>gi|73975362|ref|XP_854557.1| PREDICTED: uncharacterized protein LOC611752 [Canis lupus
familiaris]
Length = 347
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 24/98 (24%)
Query: 33 EENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYT------------- 79
+ +V FAEFSKKC+ERWKTMS KEK +F +MA DK RYD EM++Y
Sbjct: 240 DSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDP 299
Query: 80 -----PPAG------EKRGKIKQDNPEYGVGDIAKELG 106
PP+ E R KIK ++P +GD AK+LG
Sbjct: 300 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLG 337
>gi|18653894|gb|AAL77438.1|L79988_1 nuclear autoantigen, partial [Homo sapiens]
Length = 403
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 25/145 (17%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
V C EEHKKK+P+ +V F+EF KKC+E WKT+ KEK +F +MA DK Y+ EM++Y
Sbjct: 218 LVDPC-EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTY 276
Query: 79 TPP------------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
PP E R KIK ++P + D+ K+L W +
Sbjct: 277 IPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAA 336
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYK 139
+ K YE+ A K K +Y+K++ AY+
Sbjct: 337 ADKQFYEKKAAKLKEKYKKDIAAYR 361
>gi|14522874|gb|AAK64599.1|AF281043_1 high mobility group 1 protein [Homo sapiens]
gi|7960300|gb|AAF71287.1| high mobility group protein HMG1 [Homo sapiens]
Length = 50
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 40/43 (93%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 50
KPRG+M++YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK
Sbjct: 8 KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 50
>gi|109511234|ref|XP_228669.3| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|109514134|ref|XP_001066357.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
gi|392356064|ref|XP_003752207.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 22/160 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+ V+P+ ++ Y F+ R + +++ P F EFS+KC+E+WKT+S+KEKK++
Sbjct: 1 MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A +DK RY EM++Y+ PP+ + +IK+ +P + V
Sbjct: 61 EALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+AK G+ WA + K YE+ A +A+Y +E AY
Sbjct: 121 AQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY 160
>gi|225716456|gb|ACO14074.1| High mobility group-T protein [Esox lucius]
Length = 56
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 41/45 (91%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTM 52
KPRG+M++YA+FVQ CR+EHKKKHPE +V F+EFSKKC+ERWK +
Sbjct: 7 KPRGKMSSYAYFVQTCRQEHKKKHPEASVNFSEFSKKCSERWKVV 51
>gi|225718512|gb|ACO15102.1| High mobility group protein B2 [Caligus clemensi]
Length = 200
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 52/192 (27%)
Query: 1 MPKEKDVK-PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
MPK+ K P G + + FF C EE++++HPEE + KC ERW MS +EKKR
Sbjct: 1 MPKKAIPKGPEGPRSPFQFFTDTCLEEYRRRHPEEEDYLSRVRNKCQERWVLMSAEEKKR 60
Query: 60 FHEMADKDKKRYDTE--------------------------------------MQSYTPP 81
F +MA +DK R+ E ++ + P
Sbjct: 61 FIQMASEDKTRFKVEKDIVQIVELRRDMAGVKKLASGCSKKKREKPKKKQKKKQKASSEP 120
Query: 82 AGEKRGK-------------IKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDK 128
KR K + NP++ GD+++EL + WA++ P K + + + DK
Sbjct: 121 GKPKRFKSCFFMFCSEHRKRVWTANPDFTPGDVSRELARMWAELSPEEKQVFVEKSNVDK 180
Query: 129 ARYEKEMTAYKN 140
RY++E ++N
Sbjct: 181 ERYQREKFVFEN 192
>gi|410044942|ref|XP_001169551.3| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 269
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 71/139 (51%), Gaps = 31/139 (22%)
Query: 35 NVVFAEFSKKCAERWKTMSEKEKKRF-------HEMADKDKKRYDTEMQSYTPPAGEKRG 87
+V F EFSKK +ERWK MS KEK +F +MA DK RY EM++Y PP GE +
Sbjct: 55 SVNFPEFSKKSSERWKNMSAKEKGKFGRARGKFEDMAKVDKSRYKREMKTYIPPKGETKK 114
Query: 88 KIKQDN-------------PEYG-----------VGDIAKELGKKWADVDPSVKTKYEQM 123
K K N EYG +GD AK+LG+ W + K YE+
Sbjct: 115 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSIGDAAKKLGEMWNNTAADDKQPYEKR 174
Query: 124 AEKDKARYEKEMTAYKNRS 142
+ K K +YEK++ AY+ +
Sbjct: 175 SAKLKEKYEKDIAAYRAKG 193
>gi|355757371|gb|EHH60896.1| hypothetical protein EGM_18788, partial [Macaca fascicularis]
Length = 189
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 27/158 (17%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
K +G+M+++ +Q EEHKK+ P+ +V F+EF KKC ERWKTMS ++ + + D
Sbjct: 8 KLKGKMSSH--HMQTSWEEHKKQQPDASVNFSEFPKKCLERWKTMSAQKLSKGED--SMD 63
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDN-----------------------PEYGVGDIAKE 104
Y+ EM+ Y PP E + K K N P V D+AK+
Sbjct: 64 MAHYEREMKIYIPPKAETKMKFKDPNAPKRPPLAFFMFSSEDCPKIKEHPGLSVSDVAKK 123
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG+ W K YE+ A K K +YEK++ A+ +
Sbjct: 124 LGEMWNYTAEDDKHPYEKKAVKLKEKYEKDIAAFGGKG 161
>gi|355750138|gb|EHH54476.1| hypothetical protein EGM_15325, partial [Macaca fascicularis]
Length = 136
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 12/136 (8%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG+M++Y FFVQ C+E+HK++ +N + AE + + K K++ +MA
Sbjct: 8 KPRGKMSSYIFFVQTCQEQHKRRT-SQNFLSAEMN------GRPCLPKRKEKCEDMAMTY 60
Query: 68 KKRYDTEMQSYTPPAGE-----KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQ 122
+ Y EM++Y PP GE R KIK ++P GD+A +LG+ + K Y +
Sbjct: 61 EAYYKREMKTYIPPKGETKKFKNRPKIKGEHPGLSTGDVATKLGEMYNSSAADDKQPYGK 120
Query: 123 MAEKDKARYEKEMTAY 138
A K +YEK TAY
Sbjct: 121 KAAKLLGKYEKHTTAY 136
>gi|7206622|gb|AAF39781.1| SP100-HMG [Homo sapiens]
Length = 181
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 24/142 (16%)
Query: 25 EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPP--- 81
EEHKKK+P+ +V F+EF KKC+E WKT+ KEK +F +MA DK Y+ EM++Y PP
Sbjct: 1 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 60
Query: 82 ---------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKY 120
E R KIK ++P + D+ K+L W + + K Y
Sbjct: 61 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 120
Query: 121 EQMAEKDKARYEKEMTAYKNRS 142
E+ A K K +Y+K++ AY+ +
Sbjct: 121 EKKAAKLKEKYKKDIAAYRAKG 142
>gi|392343502|ref|XP_003754903.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 22/160 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+ V+P+ ++ Y F+ R + +++ P F EFS+KC+E+WKT+S+KEKK++
Sbjct: 1 MGKDSKVRPKVNVSPYVHFMMDFRNQMREQQPNIYYDFTEFSRKCSEKWKTISKKEKKKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A +DK RY EM++Y+ PP+ + +IK+ +P + V
Sbjct: 61 EALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFEEIKEQHPNWTV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+AK G+ WA + K YE+ A +A+Y +E AY
Sbjct: 121 AQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY 160
>gi|392351679|ref|XP_003750994.1| PREDICTED: high mobility group protein B2-like, partial [Rattus
norvegicus]
Length = 159
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 32/160 (20%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G ++ AFF Q CR+EHK+ V F EF KK ERWKT+S KE+ +F ++A +
Sbjct: 7 KPQGAKSSKAFFPQTCRKEHKR-LASSPVNFREFXKKSPERWKTISAKEESKFEDLAKSN 65
Query: 68 KKRYDTEMQSYTPPAGEKRGK------------------------IKQDNPEYGVGDIAK 103
RYD E G+K+GK IK + P +GD A+
Sbjct: 66 XARYDRE-------KGDKKGKEEDPNARKGPPTAFFLFCSEHLPEIKSERPGLSIGDTAR 118
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
+LG+ W++ K YE+ A K + EK++ S+
Sbjct: 119 KLGEMWSEQSVKDKQPYERRAAKLREACEKDIAVRTVLSI 158
>gi|444732467|gb|ELW72759.1| High mobility group protein B2 [Tupaia chinensis]
Length = 175
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 70/135 (51%), Gaps = 24/135 (17%)
Query: 25 EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTP---- 80
EEHK+KHP+ +V FAEFSKK ERWKTMS K K F +MA DK D +M++Y P
Sbjct: 21 EEHKRKHPDSSVNFAEFSKKYWERWKTMSAKGKLEFEDMAKCDKTHDDRKMKNYVPRKGD 80
Query: 81 -------PAGEKRG-------------KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKY 120
P KR KIK ++P +G+ AK++G+ W++ K
Sbjct: 81 KKGKKKDPNALKRPPSAFFLFCSGHLLKIKSEHPGLSIGNTAKKMGEMWSEQSAKEKRPC 140
Query: 121 EQMAEKDKARYEKEM 135
EQ A K +YE +
Sbjct: 141 EQKAAKLTEKYEIRL 155
>gi|392356036|ref|XP_003752196.1| PREDICTED: high mobility group protein B4-like [Rattus norvegicus]
Length = 168
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 86/160 (53%), Gaps = 22/160 (13%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M K+ V+P+ ++ Y F+ R + +++ P F EFS+KC+E+WKT+S+KEKK++
Sbjct: 1 MGKDSKVRPKVNVSPYVHFMMDFRNQMREQQPNIYYDFTEFSRKCSEKWKTISKKEKKKY 60
Query: 61 HEMADKDKKRYDTEMQSYT----------------PPAG------EKRGKIKQDNPEYGV 98
+A +DK RY EM++Y+ PP+ + +IK+ +P + V
Sbjct: 61 EALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFEEIKEQHPNWPV 120
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+AK G+ WA + K YE+ A +A+Y +E AY
Sbjct: 121 AQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY 160
>gi|224002190|ref|XP_002290767.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
gi|220974189|gb|EED92519.1| structure specific recognition protein 1 [Thalassiosira pseudonana
CCMP1335]
Length = 765
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 41/169 (24%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ FF R + K +P+ + FAE +K +K +S EK ++ E+A DK
Sbjct: 541 PKRGLSAFNFFTSAKRGDIKAANPDAS--FAELAKLVGAEFKGLSASEKAKYEELAANDK 598
Query: 69 KRYDTEMQSYTPP---------------------------------------AGEKRGKI 89
KRY+ EM+SY PP A R ++
Sbjct: 599 KRYEKEMESYVPPEEDSDDESDGEKTTKKPSAKKAKKDPNAPKRPMNPYMLFANSVRAQV 658
Query: 90 KQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+++NP+ +GD++KE+G ++ +D K K++ A+ K Y+KEM Y
Sbjct: 659 REENPDMSMGDVSKEIGIRYKAIDEKEKAKWQSKADAAKEVYKKEMAQY 707
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
KRG IK NP+ ++AK +G ++ + S K KYE++A DK RYEKEM +Y
Sbjct: 555 KRGDIKAANPDASFAELAKLVGAEFKGLSASEKAKYEELAANDKKRYEKEMESY-----V 609
Query: 145 PVNEEADEEDD 155
P E++D+E D
Sbjct: 610 PPEEDSDDESD 620
>gi|7439867|pir||S68823 HMG1 protein homolog, 6K - mouse
Length = 54
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 40/46 (86%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMS 53
KPRG+M +YAFFVQ C EE KKKHP+ +V F+EFSKKC+ERWKT+S
Sbjct: 8 KPRGKMASYAFFVQTCPEELKKKHPDASVNFSEFSKKCSERWKTIS 53
>gi|194767497|ref|XP_001965852.1| GF20527 [Drosophila ananassae]
gi|190618452|gb|EDV33976.1| GF20527 [Drosophila ananassae]
Length = 93
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 89 IKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+K NPE+ VGDIAKELG+KW+DVDP VK KYE MAE+D RYE+EMT YK
Sbjct: 1 MKALNPEFDVGDIAKELGRKWSDVDPEVKQKYESMAERDMDRYEREMTEYKT 52
>gi|444707107|gb|ELW48409.1| High mobility group protein B1 [Tupaia chinensis]
Length = 134
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 23/100 (23%)
Query: 30 KHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKI 89
+HP+ V F+EFSKKC+ER + MS KEK +F ++A DK RY+ EM++Y PP GE + K
Sbjct: 14 QHPDAPVSFSEFSKKCSERGEAMSAKEKGKFEDVAKADKARYEGEMRTYIPPTGETKKKF 73
Query: 90 K-----------------------QDNPEYGVGDIAKELG 106
K +D+P GD+AK+LG
Sbjct: 74 KDPSAPKRPPSAFFSFCSEYHCKAKDHPGLSAGDVAKKLG 113
>gi|221220244|gb|ACM08783.1| High mobility group protein B3 [Salmo salar]
Length = 69
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 40/54 (74%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSE 54
M K KP+G+M+AYA+FVQ CREEHKKK PE V FAEFSKKC+ RWK E
Sbjct: 1 MAKGTPGKPKGKMSAYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKVRIE 54
>gi|326437876|gb|EGD83446.1| hypothetical protein PTSG_04053 [Salpingoeca sp. ATCC 50818]
Length = 797
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 32/161 (19%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ TAYA + R + K++HP ++ F E SKK + W+ +++++K ++E A +D+
Sbjct: 577 PKKAKTAYALWSSSARSKLKEQHP--DLSFGELSKKLGQAWQDLADEDKAEWNEKAKEDR 634
Query: 69 KRYDTEMQSY--------------------TPPAG----------EKRGKIKQDNPEYGV 98
+RY E + + P G E R KIK++ P+ +
Sbjct: 635 QRYLKEKKKFDAENPDAAKPAKKMRKKKDPNAPKGAKSAYIYFSTEMREKIKEEKPDLTL 694
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
G I++E G W + K KYE+MA +DK RYE EM YK
Sbjct: 695 GQISQECGTLWRGLSDEEKKKYEKMAAEDKKRYEAEMAEYK 735
>gi|348680492|gb|EGZ20308.1| hypothetical protein PHYSODRAFT_285400 [Phytophthora sojae]
Length = 211
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 30/166 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ FF RE KK+ PE + F + S + RWK +S++E++ + E+A DK
Sbjct: 25 PKRALSAFMFFSNDIRETVKKEMPE--LAFLQISSEIGRRWKKISDEERRPYDELAAADK 82
Query: 69 KRYDTEMQSYTP---------------PAGEKRG-------------KIKQDNPEYGVGD 100
+RY E + Y P P KR +++ +NP + +
Sbjct: 83 RRYQEEKEDYVPDPSFETTKGSRKKKDPNAPKRALSAYFFFCNDIRQEVRDENPNKKITE 142
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPV 146
IA L ++W + + KY++M E+ K +Y+++M AY + A V
Sbjct: 143 IATLLAERWRALPDKKRAKYQKMHEEAKVKYQQQMDAYNAQGSAAV 188
>gi|23396869|sp|Q9N1Q7.1|SP100_PANTR RecName: Full=Nuclear autoantigen Sp-100; AltName: Full=Nuclear
dot-associated Sp100 protein; AltName: Full=Speckled 100
kDa
gi|7239183|gb|AAF43108.1|AF169946_1 SP100-HMG nuclear autoantigen, partial [Pan troglodytes]
Length = 215
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 25/126 (19%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
V C EEHKKK+P+ +V F+EF KK +E WKT+ KEK +F +MA DK Y+ EM++Y
Sbjct: 49 LVDPC-EEHKKKNPDASVKFSEFLKKRSEMWKTIFAKEKGKFEDMAKADKAHYEREMKTY 107
Query: 79 TPP------------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
PP E R KIK ++P + D+ K+L W +
Sbjct: 108 IPPKGEKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAA 167
Query: 115 SVKTKY 120
S K Y
Sbjct: 168 SDKQFY 173
>gi|449500530|ref|XP_002187513.2| PREDICTED: high mobility group protein B2 [Taeniopygia guttata]
Length = 145
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 61/115 (53%), Gaps = 24/115 (20%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAG------------------------EKRG 87
MS KEK +F EMA DK RYD EM++Y PP G E R
Sbjct: 1 MSSKEKGKFEEMAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEHRP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
KIK ++P +GD AK+LG+ W++ K YEQ A K K +YEK++ AY+ +S
Sbjct: 61 KIKNEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKS 115
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +A+ F R + K +HP + + +KK E W S K+K+ + + A K K
Sbjct: 44 PKRPPSAFFLFCSEHRPKIKNEHP--GLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 101
Query: 69 KRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYE 121
++Y+ ++ +Y R K K D + G G A G K D+ + +T +E
Sbjct: 102 EKYEKDIAAY-------RAKSKSDARKKGPGRPA---GSKRRDITLAQETSFE 144
>gi|383858168|ref|XP_003704574.1| PREDICTED: putative high mobility group protein 1-like 10-like
[Megachile rotundata]
Length = 202
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E RGK+++ +PE GVGDIAKELGK W D K+KY +AE+D+ARYE+E+ AY R
Sbjct: 133 ELRGKMRELHPEMGVGDIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYNKR 190
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F Q R + ++ HPE V + +K+ + W + + K ++ +A++D+
Sbjct: 120 PKRALSAFFYFCQELRGKMRELHPEMGV--GDIAKELGKLWMSTDLQTKSKYMAIAEEDR 177
Query: 69 KRYDTEMQSY 78
RY+ E+ +Y
Sbjct: 178 ARYEREIIAY 187
>gi|412986109|emb|CCO17309.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 725
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 28/157 (17%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+G +AY F + R K +P N+ E + +RWK +S+KEKK + + A+ D+
Sbjct: 567 PKGAKSAYICFCEKERANIAKDNP--NLAATEIMTELGKRWKALSDKEKKPYEKQAETDR 624
Query: 69 KRYDTEMQSYTPPAG---EKRGKIKQDNP-----------------------EYGVGDIA 102
R++ M++Y PP EK+GK ++ +P E D+
Sbjct: 625 ARFNEAMKNYEPPETDDDEKQGKRRKKDPDAPKNAKSAYIIFCAAKRSTIPKETAPKDVM 684
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+LG+ W+ + K YE ++ KDK RYEKEM YK
Sbjct: 685 SKLGQMWSATSVADKKPYEDLSRKDKVRYEKEMAKYK 721
>gi|380025634|ref|XP_003696574.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Apis florea]
Length = 202
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E RGK+++ +PE GVGDIAKELGK W D K+KY +AE+D+ARYE+E+ AY R
Sbjct: 133 ELRGKMRELHPEMGVGDIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYNKR 190
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F Q R + ++ HPE V + +K+ + W + + K ++ +A++D+
Sbjct: 120 PKRALSAFFYFCQELRGKMRELHPEMGV--GDIAKELGKLWMSTDLQTKSKYMAIAEEDR 177
Query: 69 KRYDTEMQSY 78
RY+ E+ +Y
Sbjct: 178 ARYEREIIAY 187
>gi|328790254|ref|XP_624266.2| PREDICTED: putative high mobility group protein B1-like 1-like
[Apis mellifera]
Length = 202
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E RGK+++ +PE GVGDIAKELGK W D K+KY +AE+D+ARYE+E+ AY R
Sbjct: 133 ELRGKMRELHPEMGVGDIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYNKR 190
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F Q R + ++ HPE V + +K+ + W + + K ++ +A++D+
Sbjct: 120 PKRALSAFFYFCQELRGKMRELHPEMGV--GDIAKELGKLWMSTDLQTKSKYMAIAEEDR 177
Query: 69 KRYDTEMQSYT 79
RY+ E+ +Y
Sbjct: 178 ARYEREIIAYN 188
>gi|307191139|gb|EFN74837.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 205
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E RGK+++ +PE GVGDIAKELGK W D K+KY +AE+D+ARYE+E+ AY R
Sbjct: 136 ELRGKMRELHPEMGVGDIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYNKR 193
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F Q R + ++ HPE V + +K+ + W + + K ++ +A++D+
Sbjct: 123 PKRALSAFFYFCQELRGKMRELHPEMGV--GDIAKELGKLWMSTDLQTKSKYMAIAEEDR 180
Query: 69 KRYDTEMQSY 78
RY+ E+ +Y
Sbjct: 181 ARYEREIIAY 190
>gi|322797845|gb|EFZ19753.1| hypothetical protein SINV_15148 [Solenopsis invicta]
Length = 220
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E RGK+++ +PE GVGDIAKELGK W D K+KY +AE+D+ARYE+E+ AY R
Sbjct: 151 ELRGKMRELHPEMGVGDIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYNKR 208
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F Q R + ++ HPE V + +K+ + W + + K ++ +A++D+
Sbjct: 138 PKRALSAFFYFCQELRGKMRELHPEMGV--GDIAKELGKLWMSTDLQTKSKYMAIAEEDR 195
Query: 69 KRYDTEMQSY 78
RY+ E+ +Y
Sbjct: 196 ARYEREIIAY 205
>gi|340711910|ref|XP_003394509.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Bombus terrestris]
gi|350402612|ref|XP_003486543.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Bombus impatiens]
Length = 202
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E RGK+++ +PE GVGDIAKELGK W D K+KY +AE+D+ARYE+E+ AY R
Sbjct: 133 ELRGKMRELHPEMGVGDIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYNKR 190
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F Q R + ++ HPE V + +K+ + W + + K ++ +A++D+
Sbjct: 120 PKRALSAFFYFCQELRGKMRELHPEMGV--GDIAKELGKLWMSTDLQTKSKYMAIAEEDR 177
Query: 69 KRYDTEMQSYT 79
RY+ E+ +Y
Sbjct: 178 ARYEREIIAYN 188
>gi|440804471|gb|ELR25348.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 205
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ MTAY F Q R + K HP V F + K E W + + +K++++E+A KDK
Sbjct: 12 PKRAMTAYMLFSQEKRTQIKTDHP--TVGFGQVGKLLGEAWAALPDGDKRKYNELAAKDK 69
Query: 69 KRYDTEMQSYT---------------------PPAGEK------------RGKIKQDNPE 95
RY E Y P A +K R +IK +NP+
Sbjct: 70 IRYQKEAAQYKEDHPESSDEEERPAKKRKKKDPNAPKKPCSAFFHFSKKMRPRIKDENPD 129
Query: 96 YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
G + K +G++W+ + + ++E +A DK RY KEM Y+
Sbjct: 130 ASFGQLGKIIGEQWSKLGADERKEFETLAAADKERYAKEMKDYQ 173
>gi|332025495|gb|EGI65658.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 204
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E R K+++ +PE GVGDIAKELGK W D K+KY +AE+D+ARYE+E+ AY R
Sbjct: 135 ELRSKMRELHPEMGVGDIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYNKR 192
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F Q R + ++ HPE V + +K+ + W + + K ++ +A++D+
Sbjct: 122 PKRALSAFFYFCQELRSKMRELHPEMGV--GDIAKELGKLWMSTDLQTKSKYMAIAEEDR 179
Query: 69 KRYDTEMQSY 78
RY+ E+ +Y
Sbjct: 180 ARYEREIIAY 189
>gi|351715334|gb|EHB18253.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 151
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 60/115 (52%), Gaps = 22/115 (19%)
Query: 50 KTMSEKEKKRFHEMADKDKKRYDTEMQSYTP----------------PAG------EKRG 87
+TMS KEK +F EMA DK RYD EM+ Y P P G E R
Sbjct: 1 QTMSGKEKSKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPPGFFLFFSEFRP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
KIK NP +GD+AK+LG+ W ++ S K Y A K K +YEK++ YK++
Sbjct: 61 KIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYITKAAKLKEKYEKDVADYKSKG 115
>gi|354484377|ref|XP_003504365.1| PREDICTED: high mobility group protein B2-like [Cricetulus griseus]
Length = 264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 24/116 (20%)
Query: 51 TMSEKEKKRFHEMADKDKKRYDTEMQSYT------------------PPAG------EKR 86
TMS KEK +F ++A DK RYD EM++Y PP+ E R
Sbjct: 105 TMSAKEKSKFEDLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHR 164
Query: 87 GKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
KIK ++P +GD AK+LG+ W++ K YEQ A K K +YEK++ AY+ +
Sbjct: 165 PKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKG 220
>gi|325181980|emb|CCA16434.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 204
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 30/158 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ FF R++ KK+ PE + F + S + +RWK ++++ + E+A+ DK
Sbjct: 25 PKRALSAFMFFSNDIRDQVKKEMPE--LEFLQISTEIGKRWKQCKPEDRRPYEELAEADK 82
Query: 69 KRYDTEMQSYTP-PA---------------------------GEKRGKIKQDNPEYGVGD 100
KRY E + Y P P+ E R ++Q+NP+ + +
Sbjct: 83 KRYQEEKEDYVPDPSFETTRSTRKKKDPDAPKRALSAYFFFCNEARDALRQENPDKKITE 142
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
IA L +KW ++ + KY +M E K +Y+++M Y
Sbjct: 143 IASLLAEKWRNLPEKKRVKYHKMHEGAKVKYQEQMDVY 180
>gi|23396867|sp|Q9N1Q5.1|SP100_HYLLA RecName: Full=Nuclear autoantigen Sp-100; AltName: Full=Nuclear
dot-associated Sp100 protein; AltName: Full=Speckled 100
kDa
gi|7239187|gb|AAF43110.1|AF169948_1 SP100-HMG nuclear autoantigen, partial [Hylobates lar]
Length = 242
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 24/118 (20%)
Query: 27 HKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPP----- 81
HKKK+P+ +V +EF KKC+E WKT+ KEK +F +MA DK Y+ EM++Y P
Sbjct: 75 HKKKNPDASVNLSEFLKKCSEMWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPSKGEKK 134
Query: 82 -------------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKY 120
E R KIK ++P + D+ K+L + W + + K Y
Sbjct: 135 KKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAEMWNNTAAADKQFY 192
>gi|307192730|gb|EFN75838.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 205
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E R K+++ +PE GVG+IAKELGK W D K+KY +AE+D+ARYE+E+ AY R
Sbjct: 136 ELRSKMRELHPEMGVGEIAKELGKLWMSTDLQTKSKYMAIAEEDRARYEREIIAYNKR 193
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F Q R + ++ HPE V E +K+ + W + + K ++ +A++D+
Sbjct: 123 PKRALSAFFYFCQELRSKMRELHPEMGV--GEIAKELGKLWMSTDLQTKSKYMAIAEEDR 180
Query: 69 KRYDTEMQSY 78
RY+ E+ +Y
Sbjct: 181 ARYEREIIAY 190
>gi|148696675|gb|EDL28622.1| mCG11166 [Mus musculus]
Length = 160
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 24/113 (21%)
Query: 51 TMSEKEKKRFHEMADKDKKRYDTEMQSYT------------------PPAG------EKR 86
TMS KEK +F ++A DK RYD EM++Y PP+ E R
Sbjct: 1 TMSAKEKSKFEDLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSENR 60
Query: 87 GKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
KIK ++P +GD AK+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 61 PKIKIEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 113
>gi|397640346|gb|EJK74071.1| hypothetical protein THAOC_04277 [Thalassiosira oceanica]
Length = 337
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 41/172 (23%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
PR ++AY FF R E ++P + F E ++ + + ++ ++E+K + E A +DK
Sbjct: 111 PRKNISAYLFFQNEKRSEFAAENP--GMEFGELTRFTSRMYHSLPKEERKVWEEKAKQDK 168
Query: 69 KRYDTEMQSYTPPAG-------------------------------------EKRGKIKQ 91
RY++E Y PP G E+R KI +
Sbjct: 169 VRYESEKGKYVPPEGHDSNGWLLESSRSRKQKKRKDPNLPKRPRSSYVFFTSEERPKILK 228
Query: 92 --DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
++P DI LG++W ++ P + KYE MAE DK R+E+EM YK R
Sbjct: 229 EFNDPPLKFTDIGYILGERWRELKPERRKKYEGMAEGDKLRHEREMKEYKKR 280
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 42/170 (24%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY F RE ++ ++P ++ E +K + + + +K + AD D+
Sbjct: 11 PKKSLSAYMLFQSAHREAYRIQNPTWSI--GEIAKHASAEYSKLPADQKDAWDRRADADR 68
Query: 69 KRYDTEMQSYTPPAG----------------------------------------EKRGK 88
+RY EM++Y PP G EKR +
Sbjct: 69 QRYADEMKTYIPPPGYDSRGNSMAGSFSNRARRSKADRDPRAPRKNISAYLFFQNEKRSE 128
Query: 89 IKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+NP G++ + + + + + +E+ A++DK RYE E Y
Sbjct: 129 FAAENPGMEFGELTRFTSRMYHSLPKEERKVWEEKAKQDKVRYESEKGKY 178
>gi|444511434|gb|ELV09880.1| High mobility group protein B1 [Tupaia chinensis]
Length = 165
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 24/100 (24%)
Query: 45 CAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGK---------------- 88
C+ERWKTMS KEK +F +MA DK RY+ EM++Y PP GE + K
Sbjct: 2 CSERWKTMSAKEKGKFEDMAKVDKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL 61
Query: 89 --------IKQDNPEYGVGDIAKELGKKWADVDPSVKTKY 120
IK D P + DIAK+LG+ W + K Y
Sbjct: 62 FCSEYCPEIKGDYPGLSISDIAKKLGEMWNNTAADGKQPY 101
>gi|301097589|ref|XP_002897889.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106637|gb|EEY64689.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 210
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 30/158 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ FF R+ KK+ P+ + F E S + RWK +S+++++ + E+A DK
Sbjct: 29 PKRALSAFMFFSNDIRDTVKKEMPD--LQFLEISSEIGRRWKQISDEDRRPYDELAAADK 86
Query: 69 KRYDTEMQSYTP---------------PAGEKRG-------------KIKQDNPEYGVGD 100
+RY E + Y P P KR +++ +NP + +
Sbjct: 87 RRYQEEKEDYVPDPSFESTKGSRKKKDPNAPKRALSAYFFFCNDIRQEVRDENPNKKITE 146
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
IA L +KW + + KY++M E+ K +Y+++M Y
Sbjct: 147 IATLLAEKWRALPDKKRAKYQKMNEEAKVKYQQQMDVY 184
>gi|403295709|ref|XP_003938773.1| PREDICTED: high mobility group protein B2 [Saimiri boliviensis
boliviensis]
Length = 158
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 24/112 (21%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYT------------------PPAG------EKRG 87
MS KEK +F +MA DK RYD EM++Y PP+ E R
Sbjct: 1 MSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
KIK ++P +GD AK+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 61 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 112
>gi|148682766|gb|EDL14713.1| mCG116825 [Mus musculus]
Length = 162
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 24/117 (20%)
Query: 50 KTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEK------------------------ 85
KTMS KEK +F +MA DK RY+ EM++Y PP GE
Sbjct: 1 KTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEY 60
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
R KIK ++P +GD+AK+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 61 RPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 117
>gi|344235655|gb|EGV91758.1| High mobility group protein B2 [Cricetulus griseus]
Length = 159
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 24/112 (21%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYT------------------PPAG------EKRG 87
MS KEK +F ++A DK RYD EM++Y PP+ E R
Sbjct: 1 MSAKEKSKFEDLAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
KIK ++P +GD AK+LG+ W++ K YEQ A K K +YEK++ AY+
Sbjct: 61 KIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 112
>gi|403374052|gb|EJY86959.1| hypothetical protein OXYTRI_08650 [Oxytricha trifallax]
Length = 845
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
V P+ +AY F + REE KK+P V E K+ A W+++S+ ++ ++ E + +
Sbjct: 59 VPPKKSASAYIIFGKEKREEIIKKNPGLKV--TEVVKQIAATWQSLSKTDRLKYKEASKR 116
Query: 67 DKKRYDTEMQSYTPPAGE--------------KRGKIKQDNPEYGVGDIAKELGKKWADV 112
D+ RY+ E+++ + R KI Q NP+ G + +E+GK+W +
Sbjct: 117 DRDRYEKELKTLEDFSDNLKKPKKCLSAYMIFTRPKIVQKNPDMGALQVMQEVGKQWQAM 176
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAY 138
K ++Q A+KDK RY E AY
Sbjct: 177 TTDQKKYFKQKADKDKVRYLNEQKAY 202
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
++ D KP + FF Q R ++K+P N A+ K + RW +S+++K F
Sbjct: 313 QQFDGKPIKPQQSVGFFTQALRNALRQKYPFLND--AQICKAVSYRWNQLSDQQKSPFQS 370
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQ 91
+AD DK RY+ E+ G+ +GK KQ
Sbjct: 371 LADVDKIRYEKEVTDLK--NGQFKGKSKQ 397
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
EKR +I + NP V ++ K++ W + + + KY++ +++D+ RYEKE+ ++ S
Sbjct: 74 EKREEIIKKNPGLKVTEVVKQIAATWQSLSKTDRLKYKEASKRDRDRYEKELKTLEDFS 132
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
R ++Q P I K + +W + K+ ++ +A+ DK RYEKE+T KN
Sbjct: 334 RNALRQKYPFLNDAQICKAVSYRWNQLSDQQKSPFQSLADVDKIRYEKEVTDLKN 388
>gi|312373720|gb|EFR21413.1| hypothetical protein AND_17077 [Anopheles darlingi]
Length = 211
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 2 PKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
P +PR +AY F+++ E+ +H E + S CA RW+ M EK+ F
Sbjct: 18 PSSAKERPR---SAYTFYLKSFIGEYGAQHSEAPFDLGQLSSICAARWRKMPAAEKRVFE 74
Query: 62 EMADKDKKRYDTEMQSYT---PP----------AGEKRGKIKQDNPEYGVGDIAKELGKK 108
EMA KD++ + ++Q+ PP ++ K+ + +PEY D+ + +
Sbjct: 75 EMAMKDRQWFHAKIQAGIITHPPKRPLSAFRMFVRHEKAKVLEKHPEYRYLDMLRAVTNT 134
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
W +D +K Y+ A R+E E+ Y
Sbjct: 135 WHSLDNDIKAVYKVQASLANCRFENELKDY 164
>gi|196005089|ref|XP_002112411.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
gi|190584452|gb|EDV24521.1| hypothetical protein TRIADDRAFT_56397 [Trichoplax adhaerens]
Length = 253
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 16/143 (11%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AY FF R+ KK E E +K C W+ M+ +KK + E+A +DK+RY
Sbjct: 67 SAYIFFTTSLRQRLKKSGREMPKAH-EIAKMCGSEWRAMTASQKKPYDELAARDKQRYME 125
Query: 74 EMQSYTPPAGEKRGKIKQDNPEYGVGDIAKEL---------------GKKWADVDPSVKT 118
E+ + A + K Q Y + + K + G+KW + P+ K
Sbjct: 126 EISKFRKKADPDKPKRPQTAYFYFLAEFRKAMKAKGVIEGKKLTSLSGEKWRAMTPAEKA 185
Query: 119 KYEQMAEKDKARYEKEMTAYKNR 141
KYE M KDK RY++EM AY+ +
Sbjct: 186 KYEAMVTKDKERYQREMDAYRKK 208
>gi|219110207|ref|XP_002176855.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411390|gb|EEC51318.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 200
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ M+A+ F Q R K++ PE + F E ++ A ++K ++EKE +++ + A++D
Sbjct: 40 KPKRAMSAFFLFSQGNRVNVKEEFPEAS--FGEVARILARKYKELTEKEMRKWEKKAEQD 97
Query: 68 KKRYDTEMQSYTP----------------PAGEKRG-------------KIKQDNPEYGV 98
K RY EM+ Y P P KR +K DNPE
Sbjct: 98 KIRYQEEMKHYVPAEDPTGGGKRKKAKKDPNAPKRNMSAYFLYSIEVRPTVKADNPEATF 157
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
G IA+ + +K+ + P + ++ A DK RY EM YK
Sbjct: 158 GGIARLISEKFKALSPKERKVWDDKAIADKERYTSEMEIYK 198
>gi|427794389|gb|JAA62646.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 604
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ TAY F Q REE KK + +F K+CA +W TMS+++K+ F A +D+
Sbjct: 181 PKRATTAYITFTQWYREEMKKSG-RQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDR 239
Query: 69 KRYDTEMQSYTP---------PA-------GEKRGKIKQDNPEYGVGDIAKELGKKWADV 112
+RY EM Y P P G+ R ++ PE GV +AK G++W +
Sbjct: 240 ERYKREMAVYKPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSM 299
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAYK 139
K Y + ++K +YE+ M Y+
Sbjct: 300 SEEDKRPYVERQNEEKMKYEQNMEEYR 326
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ TA+ F+ R+E K PE V A +K ERW++MSE++K+ + E +++
Sbjct: 257 KPKRPGTAFMLFMGDFRKEMAGKEPEGGV--AALAKLGGERWRSMSEEDKRPYVERQNEE 314
Query: 68 KKRYDTEMQSY 78
K +Y+ M+ Y
Sbjct: 315 KMKYEQNMEEY 325
>gi|427793709|gb|JAA62306.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 640
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ TAY F Q REE KK + +F K+CA +W TMS+++K+ F A +D+
Sbjct: 217 PKRATTAYITFTQWYREEMKKSG-RQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDR 275
Query: 69 KRYDTEMQSYTPP----------------AGEKRGKIKQDNPEYGVGDIAKELGKKWADV 112
+RY EM Y P G+ R ++ PE GV +AK G++W +
Sbjct: 276 ERYKREMAVYKPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSM 335
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAYK 139
K Y + ++K +YE+ M Y+
Sbjct: 336 SEEDKRPYVERQNEEKMKYEQNMEEYR 362
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ TA+ F+ R+E K PE V A +K ERW++MSE++K+ + E +++
Sbjct: 293 KPKRPGTAFMLFMGDFRKEMAGKEPEGGV--AALAKLGGERWRSMSEEDKRPYVERQNEE 350
Query: 68 KKRYDTEMQSY 78
K +Y+ M+ Y
Sbjct: 351 KMKYEQNMEEY 361
>gi|403332110|gb|EJY65047.1| hypothetical protein OXYTRI_14805 [Oxytricha trifallax]
Length = 877
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 16/146 (10%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
V P+ +AY F + REE KK+P V E K+ A W+++S+ ++ ++ E + +
Sbjct: 91 VPPKKSASAYIIFGKEKREEIIKKNPGLKV--TEVVKQIAATWQSLSKTDRLKYKEASKR 148
Query: 67 DKKRYDTEMQSYTPPAGE--------------KRGKIKQDNPEYGVGDIAKELGKKWADV 112
D+ RY+ E+++ + R KI Q NP+ G + +E+GK+W +
Sbjct: 149 DRDRYEKELKTLEDFSDNLKKPKKCLSAYMIFTRPKIVQKNPDMGALQVMQEVGKQWQAM 208
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAY 138
K ++Q A+KDK RY E AY
Sbjct: 209 TTDQKKYFKQKADKDKVRYLNEQKAY 234
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
++ D KP + FF Q R ++K+P N A+ K + RW +S+++K F
Sbjct: 345 QQFDGKPIKPQQSVGFFTQALRNALRQKYPFLND--AQICKAVSYRWNQLSDQQKSPFQS 402
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQ 91
+AD DK RY+ E+ G+ +GK KQ
Sbjct: 403 LADVDKIRYEKEVTDLK--NGQFKGKSKQ 429
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
EKR +I + NP V ++ K++ W + + + KY++ +++D+ RYEKE+ ++ S
Sbjct: 106 EKREEIIKKNPGLKVTEVVKQIAATWQSLSKTDRLKYKEASKRDRDRYEKELKTLEDFS 164
>gi|427780835|gb|JAA55869.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 508
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ TAY F Q REE KK + +F K+CA +W TMS+++K+ F A +D+
Sbjct: 181 PKRATTAYITFTQWYREEMKKSG-RQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDR 239
Query: 69 KRYDTEMQSYTP---------PA-------GEKRGKIKQDNPEYGVGDIAKELGKKWADV 112
+RY EM Y P P G+ R ++ PE GV +AK G++W +
Sbjct: 240 ERYKREMAVYKPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSM 299
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAYK 139
K Y + ++K +YE+ M Y+
Sbjct: 300 SEEDKRPYVERQNEEKMKYEQNMEEYR 326
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 2 PKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
P KP+ TA+ F+ R+E K PE V A +K ERW++MSE++K+ +
Sbjct: 251 PARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGV--AALAKLGGERWRSMSEEDKRPYV 308
Query: 62 EMADKDKKRYDTEMQSY 78
E +++K +Y+ M+ Y
Sbjct: 309 ERQNEEKMKYEQNMEEY 325
>gi|427793707|gb|JAA62305.1| Putative dorsal switch protein 1, partial [Rhipicephalus
pulchellus]
Length = 529
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 17/147 (11%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ TAY F Q REE KK + +F K+CA +W TMS+++K+ F A +D+
Sbjct: 202 PKRATTAYITFTQWYREEMKKSG-RQIPRIGDFGKECAGKWNTMSDEDKQPFLSAAARDR 260
Query: 69 KRYDTEMQSYTP---------PA-------GEKRGKIKQDNPEYGVGDIAKELGKKWADV 112
+RY EM Y P P G+ R ++ PE GV +AK G++W +
Sbjct: 261 ERYKREMAVYKPARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGVAALAKLGGERWRSM 320
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAYK 139
K Y + ++K +YE+ M Y+
Sbjct: 321 SEEDKRPYVERQNEEKMKYEQNMEEYR 347
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 2 PKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
P KP+ TA+ F+ R+E K PE V A +K ERW++MSE++K+ +
Sbjct: 272 PARDANKPKRPGTAFMLFMGDFRKEMAGKEPEGGV--AALAKLGGERWRSMSEEDKRPYV 329
Query: 62 EMADKDKKRYDTEMQSY 78
E +++K +Y+ M+ Y
Sbjct: 330 ERQNEEKMKYEQNMEEY 346
>gi|444726553|gb|ELW67082.1| High mobility group protein B1 [Tupaia chinensis]
Length = 111
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 24/111 (21%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEK------------------------RG 87
MS KEK +F + A DK RY+ EM++Y PP GE R
Sbjct: 1 MSAKEKGKFEDTAKADKVRYEREMKTYIPPKGETKEKFKDPNASQRSPSAFFLFSSEYRP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
KIK ++P +GD+AK+LG+ W + K Y + A K K +YEK++ AY
Sbjct: 61 KIKGEHPGLSIGDVAKKLGEMWNNTAAGDKQPYGKKAAKLKEKYEKDIAAY 111
>gi|389593823|ref|XP_003722160.1| putative high mobility group protein homolog tdp-1 [Leishmania
major strain Friedlin]
gi|321438658|emb|CBZ12417.1| putative high mobility group protein homolog tdp-1 [Leishmania
major strain Friedlin]
Length = 299
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 29/164 (17%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+G ++ Y FV RE+ K KHP ++ + + WK +SE+EK R+ ++AD+DK
Sbjct: 116 PKGALSPYIIFVNENREKLKAKHP--DMKNTDLLSEMGNLWKKVSEEEKSRYQKLADEDK 173
Query: 69 KRYDTEMQSYTPPAGE--KRG------KIKQDNPEYGV--------------GDI----- 101
RYD EM +Y G KRG + P+ + +I
Sbjct: 174 LRYDREMAAYIARGGAVFKRGGKKAKKEKDPKAPKRALTAYFFFASDYRAKHANIPAKQQ 233
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
E G W + K YE++A KDK RYE E + ++ P
Sbjct: 234 MSEAGAAWGKMSAEEKKPYEELAAKDKKRYEAECSGRGSKPSQP 277
>gi|148668679|gb|EDL00993.1| mCG49874 [Mus musculus]
Length = 140
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 24/112 (21%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPP------------------------AGEKRG 87
MS KEK +F ++A DK RYD EM++Y P E R
Sbjct: 1 MSAKEKSKFEDLAKSDKARYDREMKNYVPSKGDKKGKKKDPNAPKRPPSAFFLFCSENRP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+IK D+P +GD +K+LG W++ K YEQ A K K +YEK++ A++
Sbjct: 61 EIKIDHPGLSIGDTSKKLGVMWSEQSAKDKQPYEQKAAKPKEKYEKDIAAFR 112
>gi|405977513|gb|EKC41956.1| High mobility group protein B3 [Crassostrea gigas]
Length = 202
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 17/148 (11%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ +AY FF+ RE+ KK + AEF+K+C+ +W M+EK+K+ F + A D
Sbjct: 19 RPKRATSAYFFFLSKMREDSKKAGKPITKI-AEFTKECSAKWAKMNEKDKEPFAKKALTD 77
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV----------------GDIAKELGKKWAD 111
K RYD EM Y GK K+ Y +I K G+ W +
Sbjct: 78 KNRYDAEMAIYKGKDPNDAGKPKRPQSAYFCFLADFRLKMKGKDIDHKEIIKMAGEAWRN 137
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+D + K +E++A+K++ +YE+ ++ ++
Sbjct: 138 LDDNEKKPFEKLAQKEQEKYEQALSDWR 165
>gi|40643040|emb|CAD91447.1| putative HMG-like protein [Crassostrea gigas]
Length = 135
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 30/109 (27%)
Query: 65 DKDKKRYDTEMQSYTPPAGEKRGK----------------------------IKQDNPEY 96
++DK RY+ +M +Y PPAG GK ++ +PE+
Sbjct: 13 ERDKSRYEKDMANYDPPAGGATGKRKKRAKDPNAPKRALSAFFFFCGDERPDVRAAHPEW 72
Query: 97 GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
V ++AKELGK+W V + ++K+E AE DKARY KEM AY+ P
Sbjct: 73 SVAEVAKELGKRWEKV--TNRSKFEARAEADKARYAKEMEAYRGGGSVP 119
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ FF R + + HPE +V AE +K+ +RW+ ++ + K F A+ DK
Sbjct: 47 PKRALSAFFFFCGDERPDVRAAHPEWSV--AEVAKELGKRWEKVTNRSK--FEARAEADK 102
Query: 69 KRYDTEMQSY 78
RY EM++Y
Sbjct: 103 ARYAKEMEAY 112
>gi|119616203|gb|EAW95797.1| hCG2038610 [Homo sapiens]
Length = 86
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG++ YAFF ++ R ++ ++FS+KC+ER KTMS KEK +F +MA +K
Sbjct: 12 RGKVLLYAFFGKLVRRRIRRSTQMVQST-SQFSRKCSERCKTMSAKEKGKFEDMAKANKA 70
Query: 70 RYDTEMQSYTPP 81
RY+ +M++Y PP
Sbjct: 71 RYERQMKTYIPP 82
>gi|412986017|emb|CCO17217.1| nucleosome binding protein [Bathycoccus prasinos]
Length = 346
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G Y FV RE+ K+ P + F E KK +RW+ +SEK K+ ++EMA+KD
Sbjct: 172 KPKGPQGPYMCFVSHNREKIVKEFP--GISFGECGKKLGQRWQNLSEKGKEMYNEMAEKD 229
Query: 68 KKRYDTEMQSYTP 80
KKRY+ EM+ Y P
Sbjct: 230 KKRYEKEMEKYVP 242
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%)
Query: 78 YTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
Y R KI ++ P G+ K+LG++W ++ K Y +MAEKDK RYEKEM
Sbjct: 180 YMCFVSHNREKIVKEFPGISFGECGKKLGQRWQNLSEKGKEMYNEMAEKDKKRYEKEMEK 239
Query: 138 YKNRSVAPVN 147
Y S +N
Sbjct: 240 YVPMSDTELN 249
>gi|23394916|gb|AAN31640.1|AF484963_1 high mobility group protein 1 [Biomphalaria glabrata]
Length = 215
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Query: 3 KEKDV-KPRGRMTAYAFFVQVCREEHKK--KHPEENVVFAEFSKKCAERWKTMSEKEKKR 59
K KDV KP+ +AY FF+ CR+E K K P + AEF+K+ +E+WK +S +KK
Sbjct: 15 KVKDVNKPKRATSAYFFFLAQCRKEAAKAGKAPTK---IAEFTKEASEKWKALSADKKKP 71
Query: 60 FHEMADKDKKRYDTEMQSY----TPPAGEKRG-----------KIKQDNPEYGVGDIAKE 104
F A DK+RY+TEM Y P KR +I+ N ++ K
Sbjct: 72 FEAAAADDKRRYETEMAVYKGKSVDPNKPKRPPTAYFLFLADYRIRMANKGIEHKELLKM 131
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
G++W + K YE+ A ++ +YE MT Y+
Sbjct: 132 AGEEWRSLSNEDKKPYEKKALEESKKYESAMTEYR 166
>gi|394337181|gb|AFN27605.1| high mobility group protein 1 [Azumapecten farreri]
Length = 215
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 22/150 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVV-FAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+P+ +AY FF+ CR E K NV A+F+K+ + +W++M+ +KK+F + A K
Sbjct: 21 RPKRATSAYFFFLAHCRAEAKTTG--RNVSKIADFTKEASAQWRSMTSSDKKQFDDRAAK 78
Query: 67 DKKRYDTEMQSY-------TPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKW 109
DK RYD EM + T P G+ R K+K N G DI K+ G +W
Sbjct: 79 DKARYDAEMAVFKGKVIDPTKPKRPQTAYFLFLGDFRKKMKNSN--IGHKDIIKQAGAEW 136
Query: 110 ADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+ K YE ++ + +Y++E+ ++
Sbjct: 137 RQLTDQDKKPYEDQSQILQKKYDEELKKWR 166
>gi|440794663|gb|ELR15820.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 405
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+ Y F Q R + K HP + + K +E W ++ EKK F A +
Sbjct: 241 PKRPMSTYMLFAQKKRTKVVKAHP--CLSGKQVVSKISELWHKATDAEKKLFLAKAKVKR 298
Query: 69 KRYDTE-----------------MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWAD 111
Y E M +Y A E+ + +P +G+G++ K+LG KW +
Sbjct: 299 AHYAKEATKYKKVADTKAPPKRPMSTYMQFAKERGAVLHSKHPSWGIGEVGKKLGAKWVN 358
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
V + K KY+ +A KD Y KE Y+++
Sbjct: 359 VTNTQKKKYKLLASKDATHYTKEKVIYEHK 388
>gi|391341410|ref|XP_003745023.1| PREDICTED: high mobility group protein DSP1-like [Metaseiulus
occidentalis]
Length = 192
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 26/150 (17%)
Query: 25 EEHKKKHPEENV--VFAEFSKKCAERWKTMSEKEKKRFHEMA------------DKDKKR 70
EE ++ +PE + V + + +C +RW + +EK F + + K + R
Sbjct: 19 EEFRRINPEVPLEEVREDLTSRCMDRWLILDRQEKIFFSKQSFSPRPPCRDGSTKKRRSR 78
Query: 71 YDTE------------MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKT 118
+++ M +Y E+R + Q + +GDI +E+ K+W V P +
Sbjct: 79 RNSDRPRRDPDRPKRAMTAYIYFCKEQRRLLSQSGLKLPLGDITREIAKRWKQVSPEQRQ 138
Query: 119 KYEQMAEKDKARYEKEMTAYKNRSVAPVNE 148
+EQ+A DK RY EM A++ R ++ V+E
Sbjct: 139 HFEQLAAADKQRYRDEMEAFRKRRISTVDE 168
>gi|146092993|ref|XP_001466608.1| putative high mobility group protein homolog tdp-1 [Leishmania
infantum JPCM5]
gi|398018683|ref|XP_003862506.1| high mobility group protein homolog tdp-1, putative [Leishmania
donovani]
gi|134070971|emb|CAM69647.1| putative high mobility group protein homolog tdp-1 [Leishmania
infantum JPCM5]
gi|322500736|emb|CBZ35813.1| high mobility group protein homolog tdp-1, putative [Leishmania
donovani]
Length = 302
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
K+ D P+G ++ Y FV RE+ K KHP ++ + + WK SE+EK R+ +
Sbjct: 110 KKPDDYPKGALSPYIIFVNENREKLKAKHP--DMKNTDLLSEMGNLWKKASEEEKSRYQK 167
Query: 63 MADKDKKRYDTEMQSYTPPAGE--KRG------KIKQDNPE----------YGVGDI--- 101
+AD+DK RYD EM +Y G KRG + K+ +P+ + D
Sbjct: 168 LADEDKLRYDREMAAYIARGGAVFKRGGKKAKREKKEKDPQAPKRALTAYFFFASDYRAK 227
Query: 102 ---------AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
E G W + K YE++A KDK RYE E + ++ P
Sbjct: 228 HANIPAKQQMSEAGAAWGKMSAEEKKPYEELAAKDKKRYEAECSGRGSKPSQP 280
>gi|149628522|ref|XP_001521757.1| PREDICTED: high mobility group protein B2-like, partial
[Ornithorhynchus anatinus]
Length = 106
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 55/106 (51%), Gaps = 24/106 (22%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAG------------------------EKRG 87
M+ KEK +F ++A DK RYD EM++Y PP G E+R
Sbjct: 1 MAPKEKAKFEDLAKGDKARYDREMKNYVPPKGEKKGKKKDPNAPKRPPSAFFLFCSEQRP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
KIK ++P +GD AK+LG+ W++ K YEQ A K K +YEK
Sbjct: 61 KIKSEHPGLSIGDTAKKLGELWSEQSAKDKLPYEQKAAKLKEKYEK 106
>gi|444707084|gb|ELW48390.1| High mobility group protein B1 [Tupaia chinensis]
Length = 99
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 39 AEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEK 85
++FSKKC+E WKTMS KEK +F +MA DK RY+ EM++Y PP EK
Sbjct: 6 SQFSKKCSESWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKAEK 52
>gi|300122042|emb|CBK22616.2| unnamed protein product [Blastocystis hominis]
Length = 224
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 25/155 (16%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ ++ Y + RE+ KK++PE + E SK E+WK +SE+EKK + + + D
Sbjct: 25 KPKKPLSGYMRYCNEQREQVKKENPE--LKLTEISKVLGEKWKELSEEEKKPYQDAYEAD 82
Query: 68 KKRYDTEMQSY--TPPAG---------------------EKRGKIKQDNPEYGVGDIAKE 104
K++YD +M+ Y T P G +KR ++K+ NP+ +I
Sbjct: 83 KEKYDLQMEEYKKTHPTGKKNADPNKPKRPLSSYIIFSNDKREEVKRKNPDMSNKEITTL 142
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
LGK W ++ K +YE+ ++K YE++M Y+
Sbjct: 143 LGKMWKELPEEEKQEYEKQHAEEKKAYEEKMGEYR 177
>gi|401415962|ref|XP_003872476.1| high mobility group protein homolog tdp-1,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322488700|emb|CBZ23947.1| high mobility group protein homolog tdp-1,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 300
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 32/173 (18%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
K+ D P+G ++ Y FV RE+ K KHP ++ E + WK ++E+EK R+ +
Sbjct: 108 KKPDDYPKGALSPYIIFVNENREKLKAKHP--DMKNTELLSEMGNLWKKVTEEEKSRYQK 165
Query: 63 MADKDKKRYDTEMQSYTP---------------------PAGEKRGKI---------KQD 92
+AD+DK RYD EM +Y P KR +
Sbjct: 166 LADEDKLRYDREMAAYIARGGAVFKRGGKKAKKASKEKDPKAPKRALTAYFFFASDYRAK 225
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
+ E G W + K YE++A KDK RYE E + + ++ P
Sbjct: 226 HANIPAKQQMTEAGAAWGKMSAEEKKPYEELAAKDKKRYEAECSGHGSKPSPP 278
>gi|119588737|gb|EAW68331.1| hCG1991922, isoform CRA_a [Homo sapiens]
gi|119588738|gb|EAW68332.1| hCG1991922, isoform CRA_a [Homo sapiens]
Length = 188
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 24/115 (20%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNP-------------EYG- 97
MS KEK +F +MA DK Y EM++Y PP GE + K K N EYG
Sbjct: 1 MSAKEKGKFEDMAKADKAHYKREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLYFSEYGP 60
Query: 98 ----------VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
GD+AK+LG+ W + K YE+ + K K +YEK++ AY+ +
Sbjct: 61 KIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRSAKLKEKYEKDIAAYRAKG 115
>gi|308811236|ref|XP_003082926.1| recombination signal sequence recognition pr (ISS) [Ostreococcus
tauri]
gi|116054804|emb|CAL56881.1| recombination signal sequence recognition pr (ISS) [Ostreococcus
tauri]
Length = 583
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + KR +I + NPE+G+ DIAK LG++W V K+ Y+Q AE+DKARYE+E
Sbjct: 483 LSAYMFFSAAKRAEIAEANPEFGITDIAKALGERWKTVSDE-KSVYQQQAEEDKARYERE 541
Query: 135 MTAYK 139
M Y
Sbjct: 542 MAEYN 546
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
+P+ + RG ++AY FF R E + +PE + + +K ERWKT+S+ EK +
Sbjct: 472 VPRRIRTRQRG-LSAYMFFSAAKRAEIAEANPEFGIT--DIAKALGERWKTVSD-EKSVY 527
Query: 61 HEMADKDKKRYDTEMQSY 78
+ A++DK RY+ EM Y
Sbjct: 528 QQQAEEDKARYEREMAEY 545
>gi|444726214|gb|ELW66754.1| High mobility group protein B1 [Tupaia chinensis]
Length = 160
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 24/115 (20%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEK------------------------RG 87
MS KEK +F +MA DK R++ EM++Y PP GE R
Sbjct: 1 MSAKEKGKFEDMAKADKARHEREMKTYIPPKGETEKKVKDPNAPKRPPSAFLLFCSEYRP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
KIK ++P +GD+AK+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 61 KIKGEHPGLFIGDVAKKLGEMWNNTAAGGKQPYEKKAAKLKEKYEKDIAAYRAKG 115
>gi|344239645|gb|EGV95748.1| High mobility group protein B1 [Cricetulus griseus]
Length = 119
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 32/35 (91%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAE 47
M++YAFFVQ C+EEHKKKHP+ +V F+EFSKKC+E
Sbjct: 1 MSSYAFFVQTCQEEHKKKHPDASVNFSEFSKKCSE 35
>gi|366994328|ref|XP_003676928.1| hypothetical protein NCAS_0F00880 [Naumovozyma castellii CBS 4309]
gi|342302796|emb|CCC70572.1| hypothetical protein NCAS_0F00880 [Naumovozyma castellii CBS 4309]
Length = 186
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 15/121 (12%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AY F+ Q RE+ + +P N+ + +K +E+W T+S +EK F + + ++Y
Sbjct: 51 MSAYLFYYQANREKLAEANP--NIHMKDIAKLASEKWNTLSNQEKLPFERKSSEQMEQYH 108
Query: 73 TEMQSY---TPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTK 119
+M + PP + E R I + +P +I+ +G+KW D+DP+VK +
Sbjct: 109 KQMNAIEAKLPPKKPLPAFLAFSKEVRPTIVEQDPSLTFAEISSIIGEKWRDLDPAVKDE 168
Query: 120 Y 120
Y
Sbjct: 169 Y 169
>gi|145356938|ref|XP_001422680.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582923|gb|ABP00997.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 622
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + KR +I NP +GV D+AK LG+KW + K+ Y+Q A++DK RYE+E
Sbjct: 527 LSAYMFFSAAKRAEITAANPSFGVTDVAKALGEKWKTITDEEKSVYQQQADEDKIRYERE 586
Query: 135 MTAYKNRSVAP 145
M AY+ P
Sbjct: 587 MEAYRAGGSQP 597
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R E +P V + +K E+WKT++++EK + + AD+DK
Sbjct: 523 PKRGLSAYMFFSAAKRAEITAANPSFGVT--DVAKALGEKWKTITDEEKSVYQQQADEDK 580
Query: 69 KRYDTEMQSYTPPAGEKRGKIK 90
RY+ EM++Y + + +IK
Sbjct: 581 IRYEREMEAYRAGGSQPKVEIK 602
>gi|440800724|gb|ELR21759.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 128
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 82 AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+ E+R K+K+DNP+ G GDI K++ KW D+ K Y +A+KDK RYEKEM+ YK
Sbjct: 43 SAEERVKVKEDNPDLGFGDITKQVSAKWKDMSEEEKEPYLTLAKKDKERYEKEMSKYKT 101
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ T Y FF R + K+ +P ++ F + +K+ + +WK MSE+EK+ + +A KDK
Sbjct: 32 PKRPKTGYIFFSAEERVKVKEDNP--DLGFGDITKQVSAKWKDMSEEEKEPYLTLAKKDK 89
Query: 69 KRYDTEMQSY 78
+RY+ EM Y
Sbjct: 90 ERYEKEMSKY 99
>gi|407404609|gb|EKF29994.1| high mobility group protein, putative [Trypanosoma cruzi
marinkellei]
Length = 361
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 28/155 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++ Y F R++ K+++PE + E ++ + W S+ K+++ ++A+ DK
Sbjct: 206 PKAALSPYILFGNDHRDKVKEQNPE--MKNTEILQRLGKMWAEASDAVKEKYKKLAEDDK 263
Query: 69 KRYDTEMQSYTPPAGE--KRG----KIKQDN--------------------PEYGVGDIA 102
KR+D E+ Y G KRG K+K +N P+ V + +
Sbjct: 264 KRFDRELNEYKKSGGTEYKRGGGKVKVKDENAPKRSMSAYFFFASDFRKKHPDLSVTETS 323
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
K G W ++ +K YE MA+KDK RY++EM A
Sbjct: 324 KAAGAAWKELSDEMKKPYEAMAQKDKERYQREMAA 358
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y + R K+K+ NPE +I + LGK WA+ +VK KY+++AE DK R+++E
Sbjct: 210 LSPYILFGNDHRDKVKEQNPEMKNTEILQRLGKMWAEASDAVKEKYKKLAEDDKKRFDRE 269
Query: 135 MTAYK 139
+ YK
Sbjct: 270 LNEYK 274
>gi|154340962|ref|XP_001566434.1| putative high mobility group protein homolog tdp-1 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063757|emb|CAM39944.1| putative high mobility group protein homolog tdp-1 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 299
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 31/164 (18%)
Query: 11 GRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKR 70
G ++ Y FV RE+ K ++P ++ E + WK +SE EK R+ +++D+DK R
Sbjct: 116 GALSPYIIFVNENREKLKAQNP--DMKNTELLAEMGNLWKKISEAEKSRYQKLSDEDKLR 173
Query: 71 YDTEMQSYTPPAGE--KRG-----KIKQDNPE----------YGVGDI------------ 101
YD EM +Y G KRG +K+ +P+ + D
Sbjct: 174 YDREMAAYIARGGAVFKRGGKKAKAVKEKDPKAPKRALTAYFFFASDYRSKHADVPAKQQ 233
Query: 102 AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
E G W + K YE++A KDK RYE E A ++ P
Sbjct: 234 MTEAGAAWGKMSADEKKPYEELAAKDKKRYEAECAARGSKPSLP 277
>gi|71416266|ref|XP_810170.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70874664|gb|EAN88319.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 28/155 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++ Y F R++ K+++PE + E + + W S+ K+++ ++A+ DK
Sbjct: 115 PKAALSPYILFGNDHRDKVKEQNPE--MKNTEILQSLGKMWAEASDAVKEKYKKLAEDDK 172
Query: 69 KRYDTEMQSYTPPAGE--KRG----KIKQDN--------------------PEYGVGDIA 102
KR+D E+ Y G KRG K K +N P+ V + +
Sbjct: 173 KRFDRELSEYKKSGGTEYKRGGGKVKAKDENAPKRSMSAYFFFVSDFRKKHPDLSVTETS 232
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
K G W ++ +K YE MA+KDK RY++EM A
Sbjct: 233 KAAGAAWKELSDEMKKPYEAMAQKDKERYQREMAA 267
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y + R K+K+ NPE +I + LGK WA+ +VK KY+++AE DK R+++E
Sbjct: 119 LSPYILFGNDHRDKVKEQNPEMKNTEILQSLGKMWAEASDAVKEKYKKLAEDDKKRFDRE 178
Query: 135 MTAYK 139
++ YK
Sbjct: 179 LSEYK 183
>gi|407850184|gb|EKG04681.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 28/155 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++ Y F R++ K+++P V E + + W S+ K+++ ++A+ DK
Sbjct: 115 PKAALSPYILFGNDHRDKVKEQNP--GVKNTEILQSLGKMWAEASDAVKEKYKKLAEDDK 172
Query: 69 KRYDTEMQSYTPPAGE--KRG----KIKQDN--------------------PEYGVGDIA 102
KR+D E+ Y G KRG K K +N P+ V + +
Sbjct: 173 KRFDRELSEYKKSGGTEYKRGGGKVKAKDENAPKRSMSAYFFFVGDFRKKHPDLSVTETS 232
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
K G W ++ +K YE MA+KDK RY++EM A
Sbjct: 233 KAAGAAWKELSDEMKKPYEAMAQKDKERYQREMAA 267
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y + R K+K+ NP +I + LGK WA+ +VK KY+++AE DK R+++E
Sbjct: 119 LSPYILFGNDHRDKVKEQNPGVKNTEILQSLGKMWAEASDAVKEKYKKLAEDDKKRFDRE 178
Query: 135 MTAYK 139
++ YK
Sbjct: 179 LSEYK 183
>gi|224141351|ref|XP_002324036.1| high mobility group family [Populus trichocarpa]
gi|222867038|gb|EEF04169.1| high mobility group family [Populus trichocarpa]
Length = 610
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AY FF Q+ RE +K +P +VF E +K A++W MS +EK+ + EMA DKKRY
Sbjct: 532 SAYMFFSQMERENVRKSNP--GIVFGEIAKALADKWNAMSAEEKEPYEEMARNDKKRYKL 589
Query: 74 EMQSYTPP 81
++ Y P
Sbjct: 590 QVNDYKNP 597
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
R +++ NP G+IAK L KW + K YE+MA DK RY+ ++ YKN
Sbjct: 542 RENVRKSNPGIVFGEIAKALADKWNAMSAEEKEPYEEMARNDKKRYKLQVNDYKN 596
>gi|403307003|ref|XP_003944004.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Saimiri boliviensis boliviensis]
Length = 94
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 21/91 (23%)
Query: 40 EFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKR------------- 86
+FSK C+ERWK S KEK +F EMA DK + EM+ Y P G K+
Sbjct: 2 KFSKTCSERWKITSGKEKSKFDEMAKADKVHCNWEMKGYGPAKGGKKDDPNAPKRPPSGL 61
Query: 87 --------GKIKQDNPEYGVGDIAKELGKKW 109
KIK NP +G +AK+LG+ W
Sbjct: 62 FLFCLEFCPKIKSTNPGISIGYVAKKLGEMW 92
>gi|145355189|ref|XP_001421849.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582088|gb|ABP00143.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+P+G AY FV R + K +P ++ F + +++ WKTMSE + R+ +MA+
Sbjct: 95 TRPKGPKGAYMCFVSARRSQIKDANP--DMTFPDIARELGVEWKTMSEASRHRYEQMAEL 152
Query: 67 DKKRYDTEMQSYTPPAGEKRGKIKQ 91
DK RY EM SY P + EK ++++
Sbjct: 153 DKDRYTREMLSYVPLSDEKMQELRE 177
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 77 SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
+Y +R +IK NP+ DIA+ELG +W + + + +YEQMAE DK RY +EM
Sbjct: 103 AYMCFVSARRSQIKDANPDMTFPDIARELGVEWKTMSEASRHRYEQMAELDKDRYTREML 162
Query: 137 AYKNRSVAPVNEEADEE 153
+Y P+++E +E
Sbjct: 163 SY-----VPLSDEKMQE 174
>gi|397517515|ref|XP_003828955.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 86
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 40/125 (32%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+ YA F+ C++EHKK+HP+ +V+F+E SKKC
Sbjct: 1 MSLYALFMHTCQKEHKKQHPDASVLFSECSKKC--------------------------- 33
Query: 73 TEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
+RG IK P + D AK+LG++W D K YE+ K K +YE
Sbjct: 34 ------------QRG-IKGKYPGLYIDDFAKKLGERWNDTVADDKQPYEKKPAKLKEKYE 80
Query: 133 KEMTA 137
K++ A
Sbjct: 81 KDIVA 85
>gi|194068385|dbj|BAG55013.1| high mobility group 1 protein [Saccostrea kegaki]
Length = 201
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ +AY +F+ RE+ K + AEF+K+ + +W M++K+K+ F++ A D
Sbjct: 18 KPKRSTSAYFYFLGKMREDAKSSGKPITKI-AEFTKESSAKWAKMTDKDKEPFNKKAAAD 76
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGV----------------GDIAKELGKKWAD 111
KKRYD EM Y + GK K+ Y +I K G+ W +
Sbjct: 77 KKRYDAEMAVYKGKDPSEAGKPKRPQSAYFCFLADFREKMKGKNIDHKEIIKMAGEAWRN 136
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYK--NRSVAPVNEEADEED 154
+D + K +E++A+K++ +YE+ + ++ +P + EE+
Sbjct: 137 LDDNEKKPFEKLAQKEQEKYEQALADWRRGGGGASPAKKSKQEEN 181
>gi|326437020|gb|EGD82590.1| hypothetical protein PTSG_03243 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 31/161 (19%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KPRG +T Y F + R ++HP N E +K +W+ +++++KK +++MA D
Sbjct: 48 KPRGALTPYMCFNKEVRPAIMQQHP--NASVTEVAKLIGAQWRQLTDEQKKPYNDMARTD 105
Query: 68 KKRYDTEMQSYTPPAG-----------------------------EKRGKIKQDNPEYGV 98
++RY M++Y P G +R ++ PE V
Sbjct: 106 RERYKEAMKNYVPTPGFEEGGRRRKKKKDPNAPKKPKSAYFVFAETRRDALRAQYPEDRV 165
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
D AK G++W + K ++ A++ K Y++ + YK
Sbjct: 166 SDTAKRTGEEWRGMTEEQKRPFQLKAQELKQEYDQAVAEYK 206
>gi|227115741|ref|ZP_03829397.1| hypothetical protein PcarbP_22434 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 40
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 31/40 (77%)
Query: 48 RWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRG 87
RWKTMS KEK +F EMA DK RYD EM++Y PP GEK+G
Sbjct: 1 RWKTMSSKEKGKFEEMAKGDKARYDREMKNYVPPKGEKKG 40
>gi|392575401|gb|EIW68534.1| hypothetical protein TREMEDRAFT_32029 [Tremella mesenterica DSM
1558]
Length = 116
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FFVQ R + K HP +V F E K E+WK MS EKK F ++A KDK
Sbjct: 31 PKRGLSAYMFFVQDYRPKIKNDHP--DVSFGETGKLLGEKWKAMSAAEKKPFEDLAAKDK 88
Query: 69 KRYDTEMQSYTPPAGEKRGKIKQDNP 94
R + + ++Y G ++ K+ P
Sbjct: 89 LRAEKDKKAYLATGGGEKKTSKKSKP 114
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
R KIK D+P+ G+ K LG+KW + + K +E +A KDK R EK+ AY
Sbjct: 46 RPKIKNDHPDVSFGETGKLLGEKWKAMSAAEKKPFEDLAAKDKLRAEKDKKAY 98
>gi|224077702|ref|XP_002305370.1| high mobility group family [Populus trichocarpa]
gi|222848334|gb|EEE85881.1| high mobility group family [Populus trichocarpa]
Length = 644
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AY FF Q+ RE KK +P +VF E +K A++W MS +EK+ + EMA DK+RY +
Sbjct: 564 SAYVFFSQMERENVKKSNP--GIVFGEITKALADKWNAMSAEEKEPYEEMARDDKQRYKS 621
Query: 74 EMQSY 78
++ Y
Sbjct: 622 QVNDY 626
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+R +K+ NP G+I K L KW + K YE+MA DK RY+ ++ YKN++
Sbjct: 573 ERENVKKSNPGIVFGEITKALADKWNAMSAEEKEPYEEMARDDKQRYKSQVNDYKNKNPQ 632
Query: 145 PVNEEADEEDD 155
P+ ++ E D
Sbjct: 633 PMMVDSGYESD 643
>gi|384247088|gb|EIE20576.1| hypothetical protein COCSUDRAFT_57721 [Coccomyxa subellipsoidea
C-169]
Length = 482
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AY FF R K ++P + F E +KK E WK +S+ EK + MA +DK R T
Sbjct: 165 SAYIFFGAEKRAAVKAENP--TLSFGELTKKLGEMWKGISDAEKAPYEAMASEDKNRAGT 222
Query: 74 EMQSYTPPA----GEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKA 129
E A R +IK +N + G G+I ++L W +++ E+DKA
Sbjct: 223 ERAEAKAEAKLFCDRHRQQIKDENADAGFGEITRKLAAAW-----------KEITEEDKA 271
Query: 130 RYEKEMTAYKNRSV 143
Y K+ A+ ++
Sbjct: 272 NYNKQHEAHPAETI 285
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 64 ADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQM 123
AD + +Y EKR +K +NP G++ K+LG+ W + + K YE M
Sbjct: 153 ADGSNTKVKRARSAYIFFGAEKRAAVKAENPTLSFGELTKKLGEMWKGISDAEKAPYEAM 212
Query: 124 AEKDKARYEKE 134
A +DK R E
Sbjct: 213 ASEDKNRAGTE 223
>gi|351698405|gb|EHB01324.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 63
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
+G+ + Y +Q+CRE+HK+K + V A FSKKC+ER KTMS KE +F EMA
Sbjct: 5 QGKTSPYPLLMQMCREKHKQKILDIPVNCAAFSKKCSERQKTMSGKENSKFDEMA 59
>gi|344245608|gb|EGW01712.1| High mobility group protein B1 [Cricetulus griseus]
Length = 162
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 24/115 (20%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDN------------------ 93
MS KEK +F +MA DK RY+ EM++Y P GE + K K N
Sbjct: 1 MSAKEKGKFEDMAKADKARYEREMKTYISPKGETKKKFKDPNAPKRPPSAFFLFCSEYHP 60
Query: 94 ------PEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
P +GD AK+LG+ W K YE A K K +YEK++ Y+ +
Sbjct: 61 KIKGERPGLSIGDAAKKLGETWNSTAAEDKQPYETKAAKLKEQYEKDIADYRAKG 115
>gi|299472000|emb|CBN80083.1| high mobility group protein [Ectocarpus siliculosus]
Length = 242
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMAD 65
D RGR +AY F REE K PE + V E K A +W+ +SE +K+ + A
Sbjct: 52 DAPRRGR-SAYVLFSMEAREEVKNALPEGSKV-TEVMKGIAAKWRELSETDKEEWTAKAA 109
Query: 66 KDKKRYDTEMQSYTPP-------------------------AGEKRGKIKQDNPEYGVGD 100
+DK RY+ E+ Y P + R ++++ PE D
Sbjct: 110 QDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMD 169
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
++K LG++W + K Y+ A D RY + MT +K+
Sbjct: 170 MSKMLGQEWNRMSDEEKLPYQTKAHDDTLRYREAMTVWKD 209
>gi|308813073|ref|XP_003083843.1| AmphiHMG1/2 (ISS) [Ostreococcus tauri]
gi|116055725|emb|CAL57810.1| AmphiHMG1/2 (ISS) [Ostreococcus tauri]
Length = 252
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 82 AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E+R KIK++ P DIA++LG +W + SV+ +YE MAE DK RY KE+ +
Sbjct: 91 CAERRPKIKKEKPNLSFQDIARQLGTEWRTMSDSVRAQYEHMAENDKTRYAKELAMWTPL 150
Query: 142 SVA 144
S A
Sbjct: 151 SSA 153
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+P+G Y F R + KK+ P N+ F + +++ W+TMS+ + ++ MA+
Sbjct: 78 TRPKGPKGPYMMFCAERRPKIKKEKP--NLSFQDIARQLGTEWRTMSDSVRAQYEHMAEN 135
Query: 67 DKKRYDTEMQSYTPPAGEKRGKIKQD 92
DK RY E+ +TP + + K++++
Sbjct: 136 DKTRYAKELAMWTPLSSAEMEKLREE 161
>gi|348678094|gb|EGZ17911.1| hypothetical protein PHYSODRAFT_300810 [Phytophthora sojae]
Length = 557
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 46/186 (24%)
Query: 2 PKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
P + P+ TA+ F+ RE N+ EF + ++ WK +S+ +K +H
Sbjct: 186 PLKDPFAPKPAKTAFQLFMSHNRESFMLL----NMTINEFRAEMSQLWKRLSDADKAEWH 241
Query: 62 EMADKDKKRYDTEMQSYTPPA--------------------------------------G 83
E+A +D++RYDTEM +Y PPA
Sbjct: 242 ELAKEDQRRYDTEMNAYKPPAYMDLVVQRSHKRMEELRRLAREDSAAPRLPMNAYNCYLS 301
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
KR ++ P +I +E+G W + + Y++ A++D R+ EM A+ +
Sbjct: 302 AKRQELVDRRPGRKNPEIMREIGVTWKALSDDERAVYQRKADEDVERFRAEMEAH----I 357
Query: 144 APVNEE 149
A NEE
Sbjct: 358 AKKNEE 363
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 33/154 (21%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
AY F R+E ++P +V + S + +WK +S E+K + E+A DK R+ T
Sbjct: 15 NAYLHFSHARRDELAAENPSWSV--QQVSAELGRQWKALSAAERKPWVELAQFDKARFHT 72
Query: 74 EMQSYT------------PPAGEK-------------------RGKIKQDNPEYGVGDIA 102
E + PP +K R ++ NP ++
Sbjct: 73 EAHHHVNQQQSDEQPEQAPPKRKKQSNEPRQPDTAYICFWKSQRPEVVAANPFLAAPLVS 132
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
KE+G++W + + +E +A KDK R+++E+
Sbjct: 133 KEVGRQWRALSDDERQVWEDLAAKDKLRFQEEIA 166
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
K K PR TAY R E + + E S C + W+ MSE E++ +
Sbjct: 408 KRKSGPPRRPKTAYNLMYMSKRTELLSTY---QMSHNECSALCGKLWRQMSEAEREPYKR 464
Query: 63 MADKDKKRYDTEMQSYTPPAGEKRGKIKQDN 93
MA +DK RY+ E+Q Y E K +D+
Sbjct: 465 MAAEDKHRYEAELQVYNAQQEEANNKTLRDS 495
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
K++ +PR TAY F + R E +P + SK+ +W+ +S+ E++ + +
Sbjct: 95 KKQSNEPRQPDTAYICFWKSQRPEVVAANP--FLAAPLVSKEVGRQWRALSDDERQVWED 152
Query: 63 MADKDKKRYDTEMQSYTP------------------------PAGEKRGKIKQDNPE--- 95
+A KDK R+ E+ P PA N E
Sbjct: 153 LAAKDKLRFQEEIARMQPTLAATTPDMLSALKTPLKDPFAPKPAKTAFQLFMSHNRESFM 212
Query: 96 ---YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+ + E+ + W + + K ++ ++A++D+ RY+ EM AYK
Sbjct: 213 LLNMTINEFRAEMSQLWKRLSDADKAEWHELAKEDQRRYDTEMNAYK 259
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 34/57 (59%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+R ++ +NP + V ++ ELG++W + + + + ++A+ DKAR+ E + N+
Sbjct: 24 RRDELAAENPSWSVQQVSAELGRQWKALSAAERKPWVELAQFDKARFHTEAHHHVNQ 80
>gi|256091012|ref|XP_002581447.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 59
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKT 51
KP+G M AYA F+Q R +HKKKHP + F FSK+C+E+WK
Sbjct: 16 KPKGAMNAYAAFLQSMRADHKKKHPNVTLDFKSFSKECSEQWKV 59
>gi|71662243|ref|XP_818131.1| high mobility group protein [Trypanosoma cruzi strain CL Brener]
gi|70883364|gb|EAN96280.1| high mobility group protein, putative [Trypanosoma cruzi]
Length = 270
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 28/155 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++ Y F R++ K+++P + E + + W S+ K+++ ++A+ DK
Sbjct: 115 PKAALSPYILFGNDHRDKVKEQNP--GMKNTEILQSLGKMWAEASDAVKEKYKKLAEDDK 172
Query: 69 KRYDTEMQSYTPPAGE--KRG----KIKQDN--------------------PEYGVGDIA 102
KR+D E+ Y G KRG K K +N P+ V + +
Sbjct: 173 KRFDRELSEYKKSGGTEYKRGGGKVKAKDENAPKRSMSAYFFFVSDFRKKHPDLSVTETS 232
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
K G W + +K YE MA+KDK RY++EM A
Sbjct: 233 KAAGAAWKALSDDMKKPYEAMAQKDKERYQREMAA 267
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y + R K+K+ NP +I + LGK WA+ +VK KY+++AE DK R+++E
Sbjct: 119 LSPYILFGNDHRDKVKEQNPGMKNTEILQSLGKMWAEASDAVKEKYKKLAEDDKKRFDRE 178
Query: 135 MTAYK 139
++ YK
Sbjct: 179 LSEYK 183
>gi|323454483|gb|EGB10353.1| hypothetical protein AURANDRAFT_17752, partial [Aureococcus
anophagefferens]
Length = 81
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
KP+GR +AY FV +E + K ++ + F E +KKC W+ M+ + K++ +AD+
Sbjct: 9 AKPKGRRSAYVIFV----DEQRPKLEKQGMSFPEIAKKCGRLWRKMTPEATKKYQALADE 64
Query: 67 DKKRYDTEMQSY 78
DK RY+ EM Y
Sbjct: 65 DKARYEKEMDLY 76
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 100 DIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
+IAK+ G+ W + P KY+ +A++DKARYEKEM Y+ +S
Sbjct: 38 EIAKKCGRLWRKMTPEATKKYQALADEDKARYEKEMDLYRAQSA 81
>gi|390336841|ref|XP_790476.2| PREDICTED: high mobility group protein 20A-like [Strongylocentrotus
purpuratus]
Length = 372
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
PR T Y F++ RE+ ++ +P N+ FAE +K A +W MS +K+RF + AD+DK
Sbjct: 119 PRAPHTGYVRFLKEGREKVREDNP--NMSFAEITKLLAGQWSKMSAVDKQRFLDEADRDK 176
Query: 69 KRYDTEMQSY 78
+RY E+Q Y
Sbjct: 177 ERYAKELQQY 186
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
E R K+++DNP +I K L +W+ + K ++ A++DK RY KE+ Y+
Sbjct: 132 EGREKVREDNPNMSFAEITKLLAGQWSKMSAVDKQRFLDEADRDKERYAKELQQYQ 187
>gi|325181279|emb|CCA15692.1| high mobility group protein putative [Albugo laibachii Nc14]
Length = 231
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 27/151 (17%)
Query: 10 RGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK 69
RG+ + Y F REE K P + V + + A+ W MSE EK+ + A+ DK+
Sbjct: 39 RGK-SPYILFSMDKREEIKSHMPADAKV-TDVMRAIADAWSKMSEDEKQPWKSAAEVDKQ 96
Query: 70 RYDTEMQSY-----TP-------PAGEKRG-------------KIKQDNPEYGVGDIAKE 104
RY+ EM SY P P+ KR ++K++NP+ DI+K
Sbjct: 97 RYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKR 156
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKEM 135
LG+ W+ K Y + +D++RY++EM
Sbjct: 157 LGEAWSKATDVQKAPYVEKEREDRSRYKREM 187
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +A+ F+ QV R + KK++P ++ + SK+ E W ++ +K + E +D+
Sbjct: 123 PKRASSAFLFYSQVMRPQLKKENP--DLKNTDISKRLGEAWSKATDVQKAPYVEKEREDR 180
Query: 69 KRYDTEMQSYT 79
RY EM+ +
Sbjct: 181 SRYKREMEEWN 191
>gi|403347115|gb|EJY72973.1| hypothetical protein OXYTRI_05897 [Oxytricha trifallax]
Length = 417
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 32/157 (20%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
+T Y FFV+ R ++ P N+ F E ++ RW +SE EK+ F E + +DK+R+
Sbjct: 165 LTPYMFFVKENRPRIMRESP--NMTFLEVMREVGVRWSKLSEVEKEPFKERSLEDKRRFL 222
Query: 73 TEMQSYT------------------------PPAG------EKRGKIKQDNPEYGVGDIA 102
E + + P G E R K K++NP+ +G+
Sbjct: 223 EEQEVFIRQRFAFPSNTFDQRLAQGQPQQKRPITGFQMYLRELREKTKKENPKLQMGEFM 282
Query: 103 KELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
K+ W + K Y+ M EKD+ RY+++ +K
Sbjct: 283 KQASMNWTRMSQKEKKMYDHMVEKDRNRYDEKYQDFK 319
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 6 DVKPRGRM-TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
D P R +AY F + REE ++ P N+ E +++ A+ W + +K RF E +
Sbjct: 71 DYTPPNRTKSAYQIFTEHKREELLEEKP--NMTLNELTREIAKHWARLDNDQKARFVEES 128
Query: 65 DKDKKRYDTEMQSYTPP--------------------------AGEKRGKIKQDNPEYGV 98
KDK+RY EM++ P E R +I +++P
Sbjct: 129 AKDKERYINEMRNLPVPLYRNKRPRRPRDRRKPKKVLTPYMFFVKENRPRIMRESPNMTF 188
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY-KNRSVAPVN 147
++ +E+G +W+ + K +++ + +DK R+ +E + + R P N
Sbjct: 189 LEVMREVGVRWSKLSEVEKEPFKERSLEDKRRFLEEQEVFIRQRFAFPSN 238
>gi|340052816|emb|CCC47102.1| putative high mobility group protein [Trypanosoma vivax Y486]
Length = 271
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 45/65 (69%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ SY + + R K+K +NP+ + +I ++LG+ W+D +VK KY+++A++DK R+E+E
Sbjct: 121 LSSYLIFSNDHREKLKAENPDAKITEILQKLGQMWSDASEAVKEKYKKLAQEDKERFERE 180
Query: 135 MTAYK 139
+ YK
Sbjct: 181 LNEYK 185
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 27/153 (17%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +++Y F RE+ K ++P+ + E +K + W SE K+++ ++A +DK
Sbjct: 117 PKKPLSSYLIFSNDHREKLKAENPDAKIT--EILQKLGQMWSDASEAVKEKYKKLAQEDK 174
Query: 69 KRYDTEMQSYTPPAG-----EKRGKIKQDN--------------------PEYGVGDIAK 103
+R++ E+ Y G + K K +N P + + +K
Sbjct: 175 ERFERELNEYKKSGGTEFSRSAKAKNKDENAPKRAVSAFMFFSKEFRSKHPNLSMTEGSK 234
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
G W ++ K YE MA+KDK RYEKE T
Sbjct: 235 AAGAAWRELSDEKKKPYEAMAQKDKERYEKEKT 267
>gi|344240731|gb|EGV96834.1| High mobility group protein B1 [Cricetulus griseus]
Length = 134
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 23/114 (20%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPE---------------- 95
MS KEK +F MA DK Y+ EM++YTPP GE + K+K N
Sbjct: 1 MSAKEKGKFENMAKADKACYEREMKTYTPPQGEIKKKLKDPNAPKMLSLTFFLFSSEYRP 60
Query: 96 -------YGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+ +GD+AK+LG+ W + K +E+ A K K +YEK++ AY+ +
Sbjct: 61 KIKEHSGFSLGDVAKKLGEMWNNTAADDKQPFEKKAAKLKEKYEKDIAAYRAKG 114
>gi|302309282|ref|XP_002999445.1| AGL073C-Ap [Ashbya gossypii ATCC 10895]
gi|299788284|gb|ADJ41738.1| AGL073C-Ap [Ashbya gossypii ATCC 10895]
gi|374109842|gb|AEY98747.1| FAGL073C-Ap [Ashbya gossypii FDAG1]
Length = 374
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 15/120 (12%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AY F REE +++P+ V E SK + RWK +SE++KK F+E + ++Y
Sbjct: 214 SAYFLFSMSIREELLRQYPDAKV--PELSKLSSARWKELSEEDKKPFYEQFKDNWEKYRV 271
Query: 74 ---EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKY 120
E ++ PP E R K+ +DNP+ + +I K +G++W + P K KY
Sbjct: 272 ARKEYEATLPPKRPSGPFIQFTSEMRPKLLKDNPDKSLIEITKLVGEQWRSLPPEEKQKY 331
>gi|255083979|ref|XP_002508564.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
gi|226523841|gb|ACO69822.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
Length = 288
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G AY FVQ+ R + +P+ + FAE +K E+WK M + + +MA++D
Sbjct: 117 KPKGPKGAYMCFVQIARPKINAANPD--LKFAEIAKMLGEQWKNMDTTTRAGYEKMAEQD 174
Query: 68 KKRYDTEMQSYTP 80
K+RY E+ +Y P
Sbjct: 175 KERYQREIAAYVP 187
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R KI NP+ +IAK LG++W ++D + + YE+MAE+DK RY++E+ AY P
Sbjct: 133 RPKINAANPDLKFAEIAKMLGEQWKNMDTTTRAGYEKMAEQDKERYQREIAAY-----VP 187
Query: 146 VNEEADEE 153
++E E+
Sbjct: 188 MSEAGLEQ 195
>gi|72387033|ref|XP_843941.1| high mobility group protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|123380|sp|P26586.1|HMGL_TRYBR RecName: Full=High mobility group protein homolog TDP-1
gi|162109|gb|AAA73081.1| unnamed protein product [Trypanosoma brucei]
gi|62175531|gb|AAX69670.1| high mobility group protein, putative [Trypanosoma brucei]
gi|70800473|gb|AAZ10382.1| high mobility group protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 271
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 28/155 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPE-ENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
P+ +++Y FV REE K K+P +N + K W S+ K+ + + A++D
Sbjct: 118 PKPAVSSYLLFVADQREELKAKNPGMQNTAILQTLGKM---WSDASDDVKEHYRKKAEED 174
Query: 68 KKRYDTEMQSYTPPAGE---KRGKIKQDN---------------------PEYGVGDIAK 103
K R+ E+ Y G+ + GKIK+D+ + + +++K
Sbjct: 175 KARFRREVDEYKRQGGKEYGRGGKIKKDSNAPKRAMTSFMFFSSDFRSKHSDLSIVEMSK 234
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
G W ++ P + YE+MAEKDK RY++EM A
Sbjct: 235 AAGAAWKELGPEERKVYEEMAEKDKERYKREMAAL 269
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 62 EMADKDKKRYD---TEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKT 118
EM +K KK D + SY ++R ++K NP I + LGK W+D VK
Sbjct: 106 EMTEKPKKPADYPKPAVSSYLLFVADQREELKAKNPGMQNTAILQTLGKMWSDASDDVKE 165
Query: 119 KYEQMAEKDKARYEKEMTAYKNRS 142
Y + AE+DKAR+ +E+ YK +
Sbjct: 166 HYRKKAEEDKARFRREVDEYKRQG 189
>gi|311109|gb|AAA02859.1| intrastrand crosslink recognition protein [Saccharomyces
cerevisiae]
Length = 591
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 351 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 408
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 409 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 468
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 469 LDPAKKAEYTETYKKRLKEWE 489
>gi|392333867|ref|XP_001055923.3| PREDICTED: sperm motility kinase X-like [Rattus norvegicus]
gi|392354221|ref|XP_577560.4| PREDICTED: sperm motility kinase X-like [Rattus norvegicus]
Length = 739
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 25 EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
EE+K+K+ + +V +EFSKKC+ERWKTM KEK +F +MA DK YD
Sbjct: 671 EENKRKYLDTSVNSSEFSKKCSERWKTMRAKEKGKFEDMAKADKAHYDC 719
>gi|398364635|ref|NP_012893.3| Ixr1p [Saccharomyces cerevisiae S288c]
gi|547746|sp|P33417.2|IXR1_YEAST RecName: Full=Intrastrand cross-link recognition protein; AltName:
Full=Structure-specific recognition protein; Short=SSRP
gi|486034|emb|CAA81867.1| IXR1 [Saccharomyces cerevisiae]
gi|4467991|emb|CAB37853.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285813227|tpg|DAA09124.1| TPA: Ixr1p [Saccharomyces cerevisiae S288c]
gi|392298106|gb|EIW09204.1| Ixr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 597
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 357 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 414
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 415 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 474
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 475 LDPAKKAEYTETYKKRLKEWE 495
>gi|349579530|dbj|GAA24692.1| K7_Ixr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 598
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 358 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 415
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 416 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 475
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 476 LDPAKKAEYTETYKKRLKEWE 496
>gi|259147804|emb|CAY81054.1| Ixr1p [Saccharomyces cerevisiae EC1118]
Length = 598
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 358 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 415
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 416 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 475
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 476 LDPAKKAEYTETYKKRLKEWE 496
>gi|323332798|gb|EGA74203.1| Ixr1p [Saccharomyces cerevisiae AWRI796]
Length = 588
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 351 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 408
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 409 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 468
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 469 LDPAKKAEYTETYKKRLKEWE 489
>gi|207343448|gb|EDZ70902.1| YKL032Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 589
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 351 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 408
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 409 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 468
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 469 LDPAKKAEYTETYKKRLKEWE 489
>gi|365764630|gb|EHN06152.1| Ixr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 591
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 351 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 408
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 409 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 468
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 469 LDPAKKAEYTETYKKRLKEWE 489
>gi|323347802|gb|EGA82066.1| Ixr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 592
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 352 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 409
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 410 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 469
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 470 LDPAKKAEYTETYKKRLKEWE 490
>gi|151941513|gb|EDN59876.1| intrastrand crosslink recognition protein [Saccharomyces cerevisiae
YJM789]
Length = 597
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 357 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 414
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 415 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 474
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 475 LDPAKKAEYTETYKKRLKEWE 495
>gi|256272450|gb|EEU07431.1| Ixr1p [Saccharomyces cerevisiae JAY291]
Length = 583
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 342 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 399
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 400 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 459
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 460 LDPAKKAEYTETYKKRLKEWE 480
>gi|298706788|emb|CBJ29711.1| ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription
factor [Ectocarpus siliculosus]
Length = 84
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
R +KQ+NP+ V +I+K LG +W ++D + K +++ A+KDKARY+KEM AY + A
Sbjct: 8 RAVVKQENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAA 66
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
F Q R K+++P+ V E SK RW+ M + +K F + ADKDK RY EM +Y
Sbjct: 3 FSQKERAVVKQENPDMKVT--EISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAY 60
Query: 79 T 79
Sbjct: 61 N 61
>gi|19570868|dbj|BAB86364.1| mitochondrial DNA packaging protein [Physarum polycephalum]
Length = 362
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 21/146 (14%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENV--VFAEFSKKCAERWKTMSEKEKKRFHEM 63
D P +AY F R K++P+ V V E +K RW + + +++++ ++
Sbjct: 211 DAMPSRPKSAYICFAVEARPTIVKENPQLPVTAVLGEIAK----RWTALPKDKRQKYDQL 266
Query: 64 ADKDKKRYDTEMQSYT-----PP----------AGEKRGKIKQDNPEYGVGDIAKELGKK 108
A++D+ R++ E++ + PP E IK+ P+ V +I K+L K+
Sbjct: 267 AEQDRARFERELKEFKKSYPDPPKRALSAFSIFVQENSAIIKKAQPKAKVTEIMKQLSKQ 326
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKE 134
W + K KYE A +D+ RY KE
Sbjct: 327 WNTISADKKKKYEDAAAQDRVRYLKE 352
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 77 SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
+Y A E R I ++NP+ V + E+ K+W + + KY+Q+AE+D+AR+E+E+
Sbjct: 220 AYICFAVEARPTIVKENPQLPVTAVLGEIAKRWTALPKDKRQKYDQLAEQDRARFERELK 279
Query: 137 AYK 139
+K
Sbjct: 280 EFK 282
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A++ FVQ KK P+ V E K+ +++W T+S +KK++ + A +D+
Sbjct: 289 PKRALSAFSIFVQENSAIIKKAQPKAKVT--EIMKQLSKQWNTISADKKKKYEDAAAQDR 346
Query: 69 KRYDTEMQSY 78
RY E + +
Sbjct: 347 VRYLKEKEEF 356
>gi|343471397|emb|CCD16178.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 266
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 77 SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
S+ A E R K+K NPE ++ +ELG+ W D VK KY+ +A++DKAR+++E++
Sbjct: 119 SFILFAAEHRDKVKAANPEMKTTELFQELGRMWNDASEKVKEKYKNLADEDKARFDREVS 178
Query: 137 AYK 139
YK
Sbjct: 179 EYK 181
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 26/150 (17%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +++ F R++ K +PE E ++ W SEK K+++ +AD+DK
Sbjct: 113 PKAARSSFILFAAEHRDKVKAANPEMKTT--ELFQELGRMWNDASEKVKEKYKNLADEDK 170
Query: 69 KRYDTEMQSYTPPAG---EKRGKIKQD---------------------NPEYGVGDIAKE 104
R+D E+ Y G + K+K+D N GV D+++
Sbjct: 171 ARFDREVSEYKMQGGKEYSRSAKVKKDEGAPKRPMTSFMHFSKEFRNKNKGGGVVDVSRA 230
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
G W ++ + Y+ MA++DK RY +E
Sbjct: 231 AGAAWNELSQEDRKPYQDMAQRDKERYHRE 260
>gi|255087726|ref|XP_002505786.1| histone chaperone [Micromonas sp. RCC299]
gi|226521056|gb|ACO67044.1| histone chaperone [Micromonas sp. RCC299]
Length = 643
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
E RG + + NP++ +GD+ KELG++W ++DP +K ++E A K YE M YK
Sbjct: 564 ETRGDVLEKNPDFALGDVGKELGRRWREIDPELKKEFEAKAADAKVAYEAAMKEYK 619
>gi|342180310|emb|CCC89787.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 266
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 77 SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
S+ A E R K+K NPE ++ +ELGK W D VK KY+ +A++DKAR+++E++
Sbjct: 119 SFILFAAEHRDKVKAANPEMKSTELFQELGKMWNDASEKVKEKYKNLADEDKARFDREVS 178
Query: 137 AYK 139
YK
Sbjct: 179 EYK 181
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +++ F R++ K +PE + E ++ + W SEK K+++ +AD+DK
Sbjct: 113 PKAARSSFILFAAEHRDKVKAANPE--MKSTELFQELGKMWNDASEKVKEKYKNLADEDK 170
Query: 69 KRYDTEMQSYTPPAG---EKRGKIKQD---------------------NPEYGVGDIAKE 104
R+D E+ Y G + K+K+D N GV D+++
Sbjct: 171 ARFDREVSEYKMQGGKEYSRSAKVKKDEGAPKRPMTSFMHFSKEFRNKNKGGGVVDVSRA 230
Query: 105 LGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
G W ++ + Y+ MA++DK RY++E
Sbjct: 231 AGAAWKELSEEERKPYQDMAQRDKERYDRE 260
>gi|323456782|gb|EGB12648.1| hypothetical protein AURANDRAFT_17678, partial [Aureococcus
anophagefferens]
Length = 82
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+GR +AY FF R E K+ HP+ ++ + ++ RWK +S+ +KK + +A D
Sbjct: 11 PKGRRSAYIFFGNAKRAEVKELHPDFSL--GDVGRELGARWKALSDDDKKPYAALATADA 68
Query: 69 KRYDTEMQSY 78
+RYD EM +Y
Sbjct: 69 ERYDREMAAY 78
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 76 QSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEM 135
+Y KR ++K+ +P++ +GD+ +ELG +W + K Y +A D RY++EM
Sbjct: 16 SAYIFFGNAKRAEVKELHPDFSLGDVGRELGARWKALSDDDKKPYAALATADAERYDREM 75
Query: 136 TAYK 139
AYK
Sbjct: 76 AAYK 79
>gi|344252572|gb|EGW08676.1| High mobility group protein B1 [Cricetulus griseus]
Length = 114
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 20 VQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
+Q CRE+ +KKH + +V F+EFSKK +ERWKTMS KEK +F ++A DK
Sbjct: 1 MQTCREK-RKKHQDASVNFSEFSKKVSERWKTMSAKEKGKFEDIAKADK 48
>gi|145354514|ref|XP_001421528.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581765|gb|ABO99821.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 338
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 45/181 (24%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+AY F+ R+ +KK+P +V + +K+ A +WKT+++ E+ ++D+DK RY
Sbjct: 27 MSAYLVFLNKHRDATQKKNPSWSVT--DVTKELAGKWKTVTQSERDECQRVSDEDKARYY 84
Query: 73 TEMQSYTPPAGE--------------KRGKIKQDNP------------EY---------- 96
EMQ+Y P E KR K ++ P EY
Sbjct: 85 REMQNYVPLPDEKEEPPLRFDKDGNRKRRKKDKNAPRKNRSSYIIWAQEYRDKTFRPKAN 144
Query: 97 -----GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK--NRSVAPVNEE 149
D A +LG W P + KY+ MAEK+ Y + AYK +++A E
Sbjct: 145 TPDAVSFRDQAAQLGAAWKACTPQQRKKYDDMAEKEAQAYAIKRDAYKAEQKAIALAARE 204
Query: 150 A 150
A
Sbjct: 205 A 205
>gi|444708492|gb|ELW49555.1| Golgi resident protein GCP60 [Tupaia chinensis]
Length = 597
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEF-------SKKCAERWKTMSEKEKKRF 60
KPRG+M++YAFF+Q CR+ ++ + + C +R K++S + F
Sbjct: 8 KPRGKMSSYAFFMQTCRKSTRRNTQTLRSILPNSPRNVQRDGRPCLQR-KSLSLE----F 62
Query: 61 HEMADKDKKRYDTEMQSYTPPAGEKRGK 88
+MA DK RYD EM++Y PP EK GK
Sbjct: 63 EDMAKSDKTRYDREMKNYVPPK-EKDGK 89
>gi|302828472|ref|XP_002945803.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
gi|300268618|gb|EFJ52798.1| hypothetical protein VOLCADRAFT_72419 [Volvox carteri f.
nagariensis]
Length = 199
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+R K+K DNP G++ K LG+KW + + K++YE+ A+KDK RY KEM AYK
Sbjct: 95 QRDKVKTDNPGVSFGEVGKLLGEKWKSLGANEKSEYEEKAKKDKERYAKEMEAYK 149
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +TA+ +F R++ K +P V F E K E+WK++ EK + E A KDK
Sbjct: 81 PKKNLTAFMYFSNAQRDKVKTDNP--GVSFGEVGKLLGEKWKSLGANEKSEYEEKAKKDK 138
Query: 69 KRYDTEMQSY 78
+RY EM++Y
Sbjct: 139 ERYAKEMEAY 148
>gi|261327057|emb|CBH10033.1| high mobility group protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 271
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 28/155 (18%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPE-ENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
P+ +++Y FV RE+ K K+P +N + K W S+ K+ + + A++D
Sbjct: 118 PKPAVSSYLLFVADQREDLKAKNPGMQNTAILQTLGKM---WSDASDDVKEHYRKKAEED 174
Query: 68 KKRYDTEMQSYTPPAGE---KRGKIKQDN---------------------PEYGVGDIAK 103
K R+ E+ Y G+ + GKIK+D+ + + +++K
Sbjct: 175 KARFRREVDEYKRQGGKEYGRGGKIKKDSNAPKRAMTSFMFFSSDFRSKHSDLSIVEMSK 234
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
G W ++ P + YE+MAEKDK RY++EM A
Sbjct: 235 AAGAAWKELGPEERKVYEEMAEKDKERYKREMAAL 269
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 62 EMADKDKKRYD---TEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKT 118
EM +K KK D + SY ++R +K NP I + LGK W+D VK
Sbjct: 106 EMTEKPKKPADYPKPAVSSYLLFVADQREDLKAKNPGMQNTAILQTLGKMWSDASDDVKE 165
Query: 119 KYEQMAEKDKARYEKEMTAYKNRS 142
Y + AE+DKAR+ +E+ YK +
Sbjct: 166 HYRKKAEEDKARFRREVDEYKRQG 189
>gi|401624856|gb|EJS42895.1| ixr1p [Saccharomyces arboricola H-6]
Length = 613
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ PE V E SK + RWK +++ +KK F+E
Sbjct: 373 KKQGPKRPSSAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEF 430
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +Y P+G E R + ++NP+ G+ +I K +G++W +
Sbjct: 431 RTNWEKYRVVRDAYEKTLPPKRPSGPFIQFTQEIRPTVVKENPDKGLIEITKIIGERWRE 490
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DP+ K +Y + +K +E
Sbjct: 491 LDPAKKAEYTETYKKRLKEWE 511
>gi|397640872|gb|EJK74364.1| hypothetical protein THAOC_03961 [Thalassiosira oceanica]
Length = 1104
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 29/152 (19%)
Query: 17 AFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQ 76
AFF+ ++ K + F + +K + +K +SE E+ ++ ++A +DK+RY EM+
Sbjct: 948 AFFLYSNANRNRVKAENPDAKFGDIAKLISVEFKALSEHERAKWDKLAAEDKERYQREME 1007
Query: 77 SYTPP-----------------------------AGEKRGKIKQDNPEYGVGDIAKELGK 107
Y PP + R +K+ NPE GDIAK +
Sbjct: 1008 DYEPPSDLEDDAPKRKAKKDPNAPKRNQSAFFLYSNATRNDVKEANPEAKFGDIAKIIST 1067
Query: 108 KWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+ + + ++ A +DKARY++++ YK
Sbjct: 1068 HFKALPVEERAYWDNKAAEDKARYQQQLQMYK 1099
>gi|85000895|ref|XP_955166.1| high-mobility-group (HMG) protein [Theileria annulata strain
Ankara]
gi|65303312|emb|CAI75690.1| high-mobility-group (HMG) protein, putative [Theileria annulata]
Length = 94
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYG--VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
+ SY A EKR ++ +DNP+ V + K +G W +D S K YE++AE D+ARYE
Sbjct: 27 LSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWNSLDESEKAPYEKLAEADRARYE 86
Query: 133 KEMTAY 138
KE AY
Sbjct: 87 KEKAAY 92
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +++Y FF + R E + +P+ A K W ++ E EK + ++A+ D+
Sbjct: 23 PKRALSSYMFFAKEKRAELVRDNPDLARDVAAVGKLVGAAWNSLDESEKAPYEKLAEADR 82
Query: 69 KRYDTEMQSYT 79
RY+ E +Y
Sbjct: 83 ARYEKEKAAYN 93
>gi|357134384|ref|XP_003568797.1| PREDICTED: FACT complex subunit SSRP1-B-like isoform 2
[Brachypodium distachyon]
Length = 655
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK-NRSV 143
+R +K NP G DIAK+LG+KW + K Y + DK RY++E AY+ N
Sbjct: 583 ERANLKSSNPVLGTTDIAKKLGEKWQKMSAEEKQPYVEQHLVDKKRYQEETAAYRDNAGA 642
Query: 144 APVNEEADEE 153
APV+ E+D++
Sbjct: 643 APVDVESDDQ 652
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
+ + +F + R K +P + +KK E+W+ MS +EK+ + E DKKRY
Sbjct: 573 LAPFMYFSKAERANLKSSNPVLGT--TDIAKKLGEKWQKMSAEEKQPYVEQHLVDKKRYQ 630
Query: 73 TEMQSYTPPAGEKRGKIKQDN 93
E +Y AG ++ D+
Sbjct: 631 EETAAYRDNAGAAPVDVESDD 651
>gi|159478601|ref|XP_001697391.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158274549|gb|EDP00331.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 99
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
M +Y E R ++K DNPE+ V DI + LG+ W + + K K++ +A+KDK RY KE
Sbjct: 26 MGAYMWFCKEMREQVKADNPEFSVTDIGRRLGELWKECEDDDKKKFQDLADKDKERYNKE 85
Query: 135 MTAYK 139
AY+
Sbjct: 86 NAAYQ 90
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M AY +F + RE+ K +PE +V + ++ E WK + +KK+F ++ADKDK
Sbjct: 22 PKKPMGAYMWFCKEMREQVKADNPEFSVT--DIGRRLGELWKECEDDDKKKFQDLADKDK 79
Query: 69 KRYDTEMQSY 78
+RY+ E +Y
Sbjct: 80 ERYNKENAAY 89
>gi|444717985|gb|ELW58803.1| High mobility group protein B1 [Tupaia chinensis]
Length = 111
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 24/111 (21%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDN------------------ 93
MS K+K +F +MA DK RY+ EM++Y PP GE K K N
Sbjct: 1 MSAKQKGKFEDMAKVDKARYEREMKTYIPPKGETEKKFKDPNAAKSPPSAFFLFCSEYHP 60
Query: 94 ------PEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
P +GD+AKEL + W + K YE+ A K K +Y K+ AY
Sbjct: 61 KIKGELPGLSIGDVAKELREMWNNTTADDKQPYEKKAAKLKKKYGKDTAAY 111
>gi|145233003|ref|XP_001399874.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|317026969|ref|XP_003188583.1| non-histone chromosomal protein 6 [Aspergillus niger CBS 513.88]
gi|134056796|emb|CAK37704.1| unnamed protein product [Aspergillus niger]
gi|350634700|gb|EHA23062.1| hypothetical protein ASPNIDRAFT_206990 [Aspergillus niger ATCC
1015]
Length = 103
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Query: 1 MPKEKDV---KPRGR-------------MTAYAFFVQVCREEHKKKHPEENVVFAEFSKK 44
MPKEK KPRG ++AY FF RE+ ++++P + F + K
Sbjct: 1 MPKEKTTRKTKPRGTERRKKDPNAPKRGLSAYMFFANDNREKVREENP--GISFGQVGKM 58
Query: 45 CAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGE 84
ERWK +S+ +++ + E A DKKRY+ E SY A E
Sbjct: 59 LGERWKALSDTDRRPYEEKAAADKKRYEDEKASYNAAAEE 98
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%)
Query: 53 SEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADV 112
+ K K R E KD + +Y A + R K++++NP G + K LG++W +
Sbjct: 7 TRKTKPRGTERRKKDPNAPKRGLSAYMFFANDNREKVREENPGISFGQVGKMLGERWKAL 66
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAY 138
+ + YE+ A DK RYE E +Y
Sbjct: 67 SDTDRRPYEEKAAADKKRYEDEKASY 92
>gi|302847869|ref|XP_002955468.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
gi|300259310|gb|EFJ43539.1| hypothetical protein VOLCADRAFT_76727 [Volvox carteri f.
nagariensis]
Length = 645
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
R K+K +NP G+I K LG++W + K YEQMA KDK RY + M AYK R
Sbjct: 570 REKVKAENPGIAFGEIGKMLGERWKGMGADEKAPYEQMAAKDKVRYAEAMKAYKER 625
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T + +F RE+ K ++P + F E K ERWK M EK + +MA KDK
Sbjct: 555 PKKNLTGFMYFSNANREKVKAENP--GIAFGEIGKMLGERWKGMGADEKAPYEQMAAKDK 612
Query: 69 KRYDTEMQSY 78
RY M++Y
Sbjct: 613 VRYAEAMKAY 622
>gi|303289769|ref|XP_003064172.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
gi|226454488|gb|EEH51794.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
Length = 258
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+G AY FVQ+ R + P + FAE +K+ E+WK+M + ++ ++A+ D
Sbjct: 86 KPKGPKGAYMCFVQIARPKINASQP--GLKFAEIAKQLGEQWKSMDAPTRAKYDKLAEDD 143
Query: 68 KKRYDTEMQSYTP 80
K RY ++ +Y P
Sbjct: 144 KLRYARDIAAYVP 156
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R KI P +IAK+LG++W +D + KY+++AE DK RY +++ AY A
Sbjct: 102 RPKINASQPGLKFAEIAKQLGEQWKSMDAPTRAKYDKLAEDDKLRYARDIAAYVPMDAAG 161
Query: 146 VNE 148
+++
Sbjct: 162 LDQ 164
>gi|219119941|ref|XP_002180721.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408194|gb|EEC48129.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 90
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 15 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTE 74
AY FF R + ++ P + F + K ERW+ ++ +EKKRF E+A +DK R+ E
Sbjct: 27 AYVFFTNEMRPKVLQEFP--GIKFVDLGKVLGERWRALTPEEKKRFEEVATEDKIRFQME 84
Query: 75 MQSYT 79
MQ YT
Sbjct: 85 MQQYT 89
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 77 SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
+Y E R K+ Q+ P D+ K LG++W + P K ++E++A +DK R++ EM
Sbjct: 27 AYVFFTNEMRPKVLQEFPGIKFVDLGKVLGERWRALTPEEKKRFEEVATEDKIRFQMEMQ 86
Query: 137 AY 138
Y
Sbjct: 87 QY 88
>gi|344241535|gb|EGV97638.1| High mobility group protein B1 [Cricetulus griseus]
gi|344241536|gb|EGV97639.1| High mobility group protein B1 [Cricetulus griseus]
Length = 154
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 23/114 (20%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKR-----------------------GK 88
MS KEK++F +MA DK Y+ EM++Y P GE + K
Sbjct: 1 MSAKEKEKFDDMAKADKTCYEREMKTYIPYKGEIKKFKDPNAPKRPPLAFFLFCCEYHPK 60
Query: 89 IKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
++ NP +GD+AK+LG+ W + K YE+ A + K +Y+K+ AY+ +
Sbjct: 61 NQRRNPGLSIGDVAKKLGEMWNNTAADDKQTYEKKAAELKEKYKKDTAAYRTKG 114
>gi|328856362|gb|EGG05484.1| hypothetical protein MELLADRAFT_31192 [Melampsora larici-populina
98AG31]
Length = 82
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF Q RE K ++PE V F E + +WK++ E+EKK + +MA +DK
Sbjct: 13 PKRPLSAYMFFSQDWRERIKTENPE--VSFGEIGRLLGLKWKSLGEEEKKPYEDMACRDK 70
Query: 69 KRYDTEMQSY 78
KR++TE Y
Sbjct: 71 KRHETEKAEY 80
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + + R +IK +NPE G+I + LG KW + K YE MA +DK R+E E
Sbjct: 17 LSAYMFFSQDWRERIKTENPEVSFGEIGRLLGLKWKSLGEEEKKPYEDMACRDKKRHETE 76
Query: 135 MTAY 138
Y
Sbjct: 77 KAEY 80
>gi|397610393|gb|EJK60806.1| hypothetical protein THAOC_18782, partial [Thalassiosira oceanica]
Length = 593
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 13/134 (9%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA- 64
D P + +AY FF R + K+ P N + +K +E+W+T+S +EK ++ +A
Sbjct: 27 DTTPGAKRSAYTFFTLEMRPKLAKQFP--NTSISMMAKLLSEKWRTISPEEKAKYASLAA 84
Query: 65 --DKDKKRYDTEMQ--------SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
DKD K + ++ ++ EK K+K P +G +AK +G+ W +
Sbjct: 85 DQDKDDKAVEGPVEVTVKRKANAFNLFTAEKIPKLKATYPNANLGHLAKLIGELWQLITA 144
Query: 115 SVKTKYEQMAEKDK 128
K ++ MA+K++
Sbjct: 145 EEKKRFVDMADKER 158
>gi|299741148|ref|XP_001834261.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
gi|298404577|gb|EAU87573.2| non-histone chromosomal protein 6 [Coprinopsis cinerea
okayama7#130]
Length = 184
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+KP+ ++AY FF Q RE K ++P+ F E K +WK + E+EKK + E+A+K
Sbjct: 94 LKPKRALSAYMFFSQDWRERIKAENPDAG--FGEVGKLLGAKWKELDEEEKKPYIELANK 151
Query: 67 DKKRYDTEMQSY 78
DK+R + E +Y
Sbjct: 152 DKERAENEKSAY 163
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 10/130 (7%)
Query: 35 NVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKK---RYDTEMQSYTPPAGEKRGKIKQ 91
++ + + K A+ + +EK +K A K KK + + +Y + + R +IK
Sbjct: 57 SIAYIQMPKDSAKPKRKAAEKAEKAPRAAASKSKKDPLKPKRALSAYMFFSQDWRERIKA 116
Query: 92 DNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY-----KNRSVAPV 146
+NP+ G G++ K LG KW ++D K Y ++A KDK R E E +AY K+R+ +
Sbjct: 117 ENPDAGFGEVGKLLGAKWKELDEEEKKPYIELANKDKERAENEKSAYDKGIKKSRANSGS 176
Query: 147 NEEADEEDDE 156
EE +EDDE
Sbjct: 177 GEE--DEDDE 184
>gi|323450291|gb|EGB06173.1| hypothetical protein AURANDRAFT_72060 [Aureococcus anophagefferens]
Length = 667
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 77 SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
+Y KR ++K+ +P++ +GDI +ELGK+W ++ K Y +A D RY++EM
Sbjct: 588 AYIMFGNAKRAEVKEQHPDFSLGDIGRELGKRWKELTDDDKKPYVDLATADAERYDREMA 647
Query: 137 AYK 139
AYK
Sbjct: 648 AYK 650
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+G+ +AY F R E K++HP+ ++ + ++ +RWK +++ +KK + ++A D
Sbjct: 582 PKGKSSAYIMFGNAKRAEVKEQHPDFSL--GDIGRELGKRWKELTDDDKKPYVDLATADA 639
Query: 69 KRYDTEMQSY 78
+RYD EM +Y
Sbjct: 640 ERYDREMAAY 649
>gi|320168039|gb|EFW44938.1| hypothetical protein CAOG_02944 [Capsaspora owczarzaki ATCC 30864]
Length = 193
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 29/160 (18%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ TA+ +F RE K ++P + + + + W + E +K ++ MA+ D
Sbjct: 14 KPKKPTTAFMYFSNAMRERVKTQNP--GLKMTDIASVLGKLWGQLPEADKDKYQTMANSD 71
Query: 68 KKRYDTEMQSYTPPA--GEKRGK-------------------------IKQDNPEYGVGD 100
K+RY M Y P G K GK +++ P +
Sbjct: 72 KERYAKAMDGYVAPVSTGGKSGKKSKDPNAPKRPPSAYICFANAVRPELRKTYPSDTMPA 131
Query: 101 IAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
I+ ++G+ W + K Y + AE K +++ EM AYK
Sbjct: 132 ISTKIGELWRQLTDDNKEPYNKQAEALKLKFQTEMAAYKG 171
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R ++K NP + DIA LGK W + + K KY+ MA DK RY K M Y VAP
Sbjct: 30 RERVKTQNPGLKMTDIASVLGKLWGQLPEADKDKYQTMANSDKERYAKAMDGY----VAP 85
Query: 146 VN 147
V+
Sbjct: 86 VS 87
>gi|397631195|gb|EJK70063.1| hypothetical protein THAOC_08612 [Thalassiosira oceanica]
Length = 827
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 76 QSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEM 135
+Y KR +IK+ NP+ G GDI+K LGK + ++ + K Y++MA KDKARY++EM
Sbjct: 604 SAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARYKREM 663
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 51/179 (28%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +AY FF R E K+ +P+ F + SK + +K +S+ EK+ + EMA KDK
Sbjct: 599 PKAPKSAYVFFTSAKRSEIKEANPDAG--FGDISKLLGKAYKELSDAEKEPYDEMARKDK 656
Query: 69 KRYDTEMQ----------------------------------------SYTPPAGEKRGK 88
RY EM+ ++ + R K
Sbjct: 657 ARYKREMEDYDPPSDDSDDDADDGKAKSKKPAKKRAKKDPNAPKKPMNAFMLYSNSIRQK 716
Query: 89 IKQDNPEYGVGDI---------AKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
IK++NP+ VGDI +KE G K+ ++ K K+ A+ K +Y+ E Y
Sbjct: 717 IKEENPDMKVGDITYADPFFLQSKECGIKYRALNEEEKKKWTAKADAAKEKYKVEFAQY 775
>gi|336272321|ref|XP_003350917.1| hypothetical protein SMAC_04223 [Sordaria macrospora k-hell]
gi|380090684|emb|CCC04854.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 103
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P V F + K ERWK +S+K++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GVTFGQVGKILGERWKALSDKQRAPYEAKAAADK 83
Query: 69 KRYDTEMQSYTPPAGE 84
KRY+ E Q+Y A E
Sbjct: 84 KRYEDEKQAYNAEADE 99
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 44 KCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAK 103
K A + KT + EK+R A KD + +Y A E+R ++++NP G + K
Sbjct: 3 KAAAKSKTTGKVEKRR----AKKDPNAPKRGLSAYMFFANEQRENVREENPGVTFGQVGK 58
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEADEED 154
LG++W + + YE A DK RYE E AY N EADEE+
Sbjct: 59 ILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY--------NAEADEEE 101
>gi|308812243|ref|XP_003083429.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116055309|emb|CAL57705.1| WD40 repeat-containing protein (ISS), partial [Ostreococcus tauri]
Length = 1235
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+AY F+ RE +KK P +V + +K+ A +WKT+S+ E+ ++D+DK
Sbjct: 26 PKRAMSAYLVFLNRHRERVQKKSPNASVT--DITKELALKWKTVSDAERAECQRVSDQDK 83
Query: 69 KRYDTEMQSYTPPAGEK 85
+RY EM+ Y P EK
Sbjct: 84 ERYYREMRDYVPLPDEK 100
>gi|298706803|emb|CBJ29726.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 645
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
M ++ + R ++K DNPE V +I+K LG+KW +D + K Y+ A++DKARY++E
Sbjct: 557 MSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRE 616
Query: 135 MTAYKNRSVA---PVNEEADEED 154
AY ++ A P ++++ D
Sbjct: 617 RDAYDSKKAATEPPQQSDSNDSD 639
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+G M+A+ F Q R + K +PE V E SK E+W + E +KK + + AD+DK
Sbjct: 553 PKGAMSAFMQFSQANRAQVKTDNPELKVT--EISKVLGEKWGKLDETQKKPYQDKADEDK 610
Query: 69 KRYDTEMQSY 78
RY E +Y
Sbjct: 611 ARYKRERDAY 620
>gi|384487819|gb|EIE79999.1| hypothetical protein RO3G_04704 [Rhizopus delemar RA 99-880]
Length = 99
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF Q RE+ K++PE F E K +WK M+E+EKK F E A+ DK
Sbjct: 30 PKRALSAYMFFSQANREKVIKENPEAK--FGEIGKILGAKWKEMTEEEKKPFVEKAEADK 87
Query: 69 KRYDTE 74
KRY+ E
Sbjct: 88 KRYEDE 93
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
R K+ ++NPE G+I K LG KW ++ K + + AE DK RYE E
Sbjct: 45 REKVIKENPEAKFGEIGKILGAKWKEMTEEEKKPFVEKAEADKKRYEDE 93
>gi|331220978|ref|XP_003323164.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302154|gb|EFP78745.1| high mobility group protein B1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 106
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 3 KEKDVK-PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
KEKD P+ ++AY +F Q RE K ++P +V F E + +WK +SE+EKK +
Sbjct: 29 KEKDPNAPKRPLSAYMYFSQDWRERIKTENP--DVSFGEIGRLLGLKWKGLSEEEKKPYE 86
Query: 62 EMADKDKKRYDTEMQSY 78
+MA +DKKR++ E Y
Sbjct: 87 DMASRDKKRHEAEKAEY 103
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
R +IK +NP+ G+I + LG KW + K YE MA +DK R+E E Y
Sbjct: 51 RERIKTENPDVSFGEIGRLLGLKWKGLSEEEKKPYEDMASRDKKRHEAEKAEY 103
>gi|428163656|gb|EKX32716.1| FACT complex subunit ssrp1 [Guillardia theta CCMP2712]
Length = 746
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 49/191 (25%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK-- 66
P+ +A+ F RE+ K++P+ + F E + K +E WK +S EKK F E A K
Sbjct: 552 PKRPKSAWLLFCDAKREDIVKENPD--IKFTEVNGKISEIWKNLSSDEKKPFEEEAAKLA 609
Query: 67 -----DKKRYDTEMQSYTPPAGEKRG---------------------------------- 87
DK +YD E S + AG+KR
Sbjct: 610 SKYKEDKAKYDKENPSSSGGAGKKRKGEDEKEGKAKKAKKDPNAPKRGQNAYMLWSQEAR 669
Query: 88 -KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPV 146
K+++ NP+ + + ++LG+KW ++D K ++E+ A +DK R+++E YK + P
Sbjct: 670 EKMRKANPDLPMKAVMQQLGEKWKEIDAEEKKEWEEKAREDKERFKRETEEYKKK--GPS 727
Query: 147 NEE---ADEED 154
EE A EED
Sbjct: 728 LEEFEKAGEED 738
>gi|145347793|ref|XP_001418346.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578575|gb|ABO96639.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 95
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A ++R I + NP +GV D+AK LG +WA + K+KYE A KDK RYE
Sbjct: 32 LSAYMFFAKDQRAAILKKNPSFGVTDVAKALGAQWAKT--TDKSKYEAEAAKDKKRYEAA 89
Query: 135 MTAYK 139
M YK
Sbjct: 90 MAKYK 94
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF + R KK+P V + +K +W ++K K + A KDK
Sbjct: 28 PKRPLSAYMFFAKDQRAAILKKNPSFGVT--DVAKALGAQWAKTTDKSK--YEAEAAKDK 83
Query: 69 KRYDTEMQSY 78
KRY+ M Y
Sbjct: 84 KRYEAAMAKY 93
>gi|312281655|dbj|BAJ33693.1| unnamed protein product [Thellungiella halophila]
Length = 646
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+ + FF Q+ R+ KK HP + F E K ++W+ MS +EK+ + A DK
Sbjct: 562 PKRAMSGFMFFSQMERDNIKKTHP--GIAFGEVGKVLGDKWRQMSAEEKEPYEAKAQVDK 619
Query: 69 KRYDTEMQSYTPP 81
KRY E+ Y P
Sbjct: 620 KRYKDEISDYKNP 632
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R IK+ +P G++ K LG KW + K YE A+ DK RY+ E++ YKN
Sbjct: 577 RDNIKKTHPGIAFGEVGKVLGDKWRQMSAEEKEPYEAKAQVDKKRYKDEISDYKNPQPML 636
Query: 146 VNEEADEEDD 155
V+ E + + +
Sbjct: 637 VDSENESDSN 646
>gi|326523557|dbj|BAJ92949.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 643
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+R +K NPE DIAK+LG+KW + K Y + ++ DK RY +E AY+ A
Sbjct: 572 ERANLKNINPELSTTDIAKKLGEKWQKMSAEEKQPYLEQSQVDKKRYAEETAAYRGAGAA 631
Query: 145 PVN-EEADEEDD 155
PV+ + AD D
Sbjct: 632 PVDVDSADGSSD 643
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ + + +F + R K +PE + + +KK E+W+ MS +EK+ + E + DK
Sbjct: 558 PKRAIAPFMYFSKAERANLKNINPELST--TDIAKKLGEKWQKMSAEEKQPYLEQSQVDK 615
Query: 69 KRYDTEMQSY 78
KRY E +Y
Sbjct: 616 KRYAEETAAY 625
>gi|367043490|ref|XP_003652125.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL
8126]
gi|346999387|gb|AEO65789.1| hypothetical protein THITE_126111 [Thielavia terrestris NRRL
8126]
Length = 103
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P V F + K ERWK +S+K++ + A DK
Sbjct: 24 PKRGLSAYMFFANEQRENVREENP--GVSFGQVGKILGERWKALSDKQRAPYEAKAAADK 81
Query: 69 KRYDTEMQSYTPPA 82
KRY+ E Q+Y A
Sbjct: 82 KRYEDEKQAYNAQA 95
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE A DK RYE E
Sbjct: 28 LSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRYEDE 87
Query: 135 MTAYKNRSVAPVNEEADEEDDE 156
AY N +AD +++E
Sbjct: 88 KQAY--------NAQADGDEEE 101
>gi|74628491|sp|Q7S045.1|NHP6_NEUCR RecName: Full=Non-histone chromosomal protein 6
gi|336464617|gb|EGO52857.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2508]
gi|350296712|gb|EGZ77689.1| Non-histone chromosomal protein 6 [Neurospora tetrasperma FGSC
2509]
Length = 103
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P V F + K ERWK +S+K++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GVSFGQVGKILGERWKALSDKQRAPYEAKAAADK 83
Query: 69 KRYDTEMQSYTPPAGE 84
KRY+ E Q+Y A E
Sbjct: 84 KRYEDEKQAYNAEADE 99
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 44 KCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAK 103
K A + KT + EK+R A KD + +Y A E+R ++++NP G + K
Sbjct: 3 KAAAKSKTTGKVEKRR----AKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGK 58
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEADEED 154
LG++W + + YE A DK RYE E AY N EADEE+
Sbjct: 59 ILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY--------NAEADEEE 101
>gi|444724258|gb|ELW64868.1| High mobility group protein B1 [Tupaia chinensis]
Length = 140
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 24/104 (23%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGV 98
MA DK RY+ EM++Y PP GE R KIK ++P +
Sbjct: 1 MAKADKVRYEREMKTYIPPKGETKKKFKGPNAAKRPPSAFFLFCSEYRPKIKGEHPGLSI 60
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
G +AK+LG+ W + K YE+ K K +YEK++ AY ++
Sbjct: 61 GGVAKKLGEVWNNTAADDKQPYEKKPAKLKEKYEKDIAAYPDKG 104
>gi|258563818|ref|XP_002582654.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
gi|237908161|gb|EEP82562.1| nonhistone chromosomal protein 6A [Uncinocarpus reesii 1704]
Length = 115
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +S+K++ + E A DK
Sbjct: 25 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALSDKQRAPYEEKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 83 KRYEDEKASYN 93
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE+ A DK RYE E
Sbjct: 29 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEEKAAADKKRYEDE 88
Query: 135 MTAYKNRSVAPVNEEADEEDDE 156
+Y +A EED+E
Sbjct: 89 KASYN---------QAPEEDEE 101
>gi|358372276|dbj|GAA88880.1| nucleosome binding protein (Nhp6a) [Aspergillus kawachii IFO
4308]
Length = 104
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE+ ++++P + F + K ERWK +S+ +++ + E A DK
Sbjct: 26 PKRGLSAYMFFANDNREKVREENP--GISFGQVGKMLGERWKALSDTDRRPYEEKAAADK 83
Query: 69 KRYDTEMQSYTPPAGE 84
KRY+ E SY A E
Sbjct: 84 KRYEDEKASYNAAAEE 99
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A + R K++++NP G + K LG++W + + + YE+ A DK RYE E
Sbjct: 30 LSAYMFFANDNREKVREENPGISFGQVGKMLGERWKALSDTDRRPYEEKAAADKKRYEDE 89
Query: 135 MTAY 138
+Y
Sbjct: 90 KASY 93
>gi|358060355|dbj|GAA93760.1| hypothetical protein E5Q_00406 [Mixia osmundae IAM 14324]
Length = 119
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + +KR ++K+DNP+ G++ K LG +W D+D S K +Y MA +DK RY
Sbjct: 51 LSAYMFYSQDKRTQVKEDNPDASFGELGKILGAQWKDLDESEKKQYNDMATRDKERYTNA 110
Query: 135 MTAYKNRS 142
AY+ ++
Sbjct: 111 KAAYEGKA 118
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 3 KEKDVK-PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
KEKD P+ ++AY F+ Q R + K+ +P + F E K +WK + E EKK+++
Sbjct: 40 KEKDPNAPKRPLSAYMFYSQDKRTQVKEDNP--DASFGELGKILGAQWKDLDESEKKQYN 97
Query: 62 EMADKDKKRYDTEMQSY 78
+MA +DK+RY +Y
Sbjct: 98 DMATRDKERYTNAKAAY 114
>gi|384247648|gb|EIE21134.1| SSrecog-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 659
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ ++ + KR ++K++NP+ G++ K LG KW ++ + K KY++MA+KDK RY K
Sbjct: 568 LSAFMFFSSAKRDEVKKENPDISFGEVGKALGDKWKNISATEKAKYDEMAKKDKVRYAKA 627
Query: 135 MTAY 138
AY
Sbjct: 628 KEAY 631
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ FF R+E KK++P+ + F E K ++WK +S EK ++ EMA KDK
Sbjct: 564 PKKALSAFMFFSSAKRDEVKKENPD--ISFGEVGKALGDKWKNISATEKAKYDEMAKKDK 621
Query: 69 KRYDTEMQSY 78
RY ++Y
Sbjct: 622 VRYAKAKEAY 631
>gi|223994915|ref|XP_002287141.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976257|gb|EED94584.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 85
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
K+ D R R ++ +F CR + K+ P + F E ERW+ ++ EKK++ +
Sbjct: 8 KDPDAPKRAR-GSFVYFTFECRPQIMKEQP--GIKFTELGTAMGERWRALTPDEKKKYED 64
Query: 63 MADKDKKRYDTEMQSYT 79
+A++DKKR+D EMQ Y
Sbjct: 65 LAEEDKKRFDDEMQEYN 81
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK-NRS 142
E R +I ++ P ++ +G++W + P K KYE +AE+DK R++ EM Y NR+
Sbjct: 26 ECRPQIMKEQPGIKFTELGTAMGERWRALTPDEKKKYEDLAEEDKKRFDDEMQEYNANRA 85
>gi|444729306|gb|ELW69730.1| High mobility group protein B1 [Tupaia chinensis]
Length = 160
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDN------------------ 93
MS KEK + +MA DK Y+ EM++Y PP GE + K K N
Sbjct: 1 MSAKEKGKLEDMAKADKTCYEREMKAYIPPKGETKKKFKDPNAPKRPPLAFFLFCSEYHP 60
Query: 94 ------PEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
P +GD+AK+LG+ W + YE+ A K K +YEK++ AY+ +
Sbjct: 61 KIRGEHPGLYIGDVAKKLGEMWTNTAADDTQPYEKKAAKLKEKYEKDIAAYRAKG 115
>gi|444511314|gb|ELV09851.1| YTH domain family protein 3 [Tupaia chinensis]
Length = 622
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKK 58
M K KPRG++++YAFFVQ C EEHKKKH + +V F+E + + K KK
Sbjct: 1 MGKRDSTKPRGKISSYAFFVQTCWEEHKKKHLDASVNFSELLRSAQRGGRPCLLKRKK 58
>gi|71027705|ref|XP_763496.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350449|gb|EAN31213.1| high mobility group protein, putative [Theileria parva]
Length = 94
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYG--VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
+ SY A EKR ++ ++NP+ V + K +G W +D S K YE++AE D+ARYE
Sbjct: 27 LSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWNSLDESEKAPYEKLAEADRARYE 86
Query: 133 KEMTAY 138
KE AY
Sbjct: 87 KEKAAY 92
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +++Y FF + R E +++P+ A K W ++ E EK + ++A+ D+
Sbjct: 23 PKRALSSYMFFAKEKRAELVRENPDLARDVAAVGKLVGAAWNSLDESEKAPYEKLAEADR 82
Query: 69 KRYDTEMQSYT 79
RY+ E +Y
Sbjct: 83 ARYEKEKAAYN 93
>gi|422294533|gb|EKU21833.1| nucleosome binding protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 195
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY F Q RE K + P V E SK ERW+ +S +EKK F + A K
Sbjct: 37 PKQALSAYMLFTQASREAVKAEQPGLKVT--EISKVMGERWRALSAEEKKVFEDQAASAK 94
Query: 69 KRYDTEMQSY 78
RY E+++Y
Sbjct: 95 VRYGEELRAY 104
>gi|440794204|gb|ELR15371.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 193
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A R K+K++NP+ G++ K LGK+W+ S K KYE A KDK RYEKE
Sbjct: 114 LSAYMFFAQANRDKVKKENPDATFGELGKLLGKQWSKASKSDKAKYEAKANKDKERYEKE 173
Query: 135 MTAY 138
Y
Sbjct: 174 KAKY 177
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF Q R++ KK++P + F E K ++W S+ +K ++ A+KDK
Sbjct: 110 PKKALSAYMFFAQANRDKVKKENP--DATFGELGKLLGKQWSKASKSDKAKYEAKANKDK 167
Query: 69 KRYDTEMQSY 78
+RY+ E Y
Sbjct: 168 ERYEKEKAKY 177
>gi|367020358|ref|XP_003659464.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila
ATCC 42464]
gi|347006731|gb|AEO54219.1| hypothetical protein MYCTH_2296547 [Myceliophthora thermophila
ATCC 42464]
Length = 101
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P V F + K ERWK +S+K++ + A DK
Sbjct: 24 PKRGLSAYMFFANEQRENVREENP--GVSFGQVGKILGERWKALSDKQRAPYEAKAAADK 81
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 82 KRYEDEKQAYN 92
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE A DK RYE E
Sbjct: 28 LSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRYEDE 87
Query: 135 MTAY 138
AY
Sbjct: 88 KQAY 91
>gi|347441690|emb|CCD34611.1| similar to transcription factor HMG [Botryotinia fuckeliana]
Length = 101
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P + F + K ERWK ++EK++ + E A KDK
Sbjct: 24 PKRGLSAYMFFANEQRDNVREENP--GISFGQVGKVLGERWKALNEKQRGPYEESAAKDK 81
Query: 69 KRYDTEMQSYT 79
KRY+ E +Y
Sbjct: 82 KRYEEEKANYN 92
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE+ A KDK RYE+E
Sbjct: 28 LSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRGPYEESAAKDKKRYEEE 87
Query: 135 MTAY 138
Y
Sbjct: 88 KANY 91
>gi|296418046|ref|XP_002838655.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634611|emb|CAZ82846.1| unnamed protein product [Tuber melanosporum]
Length = 103
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE + +P + F + K ERWK +SEK+++ + A DK
Sbjct: 23 PKRGLSAYMFFANEQRENVRNDNP--GIAFGQVGKVLGERWKALSEKQRQPYEAKAAADK 80
Query: 69 KRYDTEMQSYTPPAG 83
KRY+ E +Y G
Sbjct: 81 KRYEDEKAAYNAQGG 95
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++ DNP G + K LG++W + + YE A DK RYE E
Sbjct: 27 LSAYMFFANEQRENVRNDNPGIAFGQVGKVLGERWKALSEKQRQPYEAKAAADKKRYEDE 86
Query: 135 MTAY 138
AY
Sbjct: 87 KAAY 90
>gi|440631791|gb|ELR01710.1| non-histone chromosomal protein 6 [Geomyces destructans 20631-21]
Length = 101
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF Q R+ ++++P + F + K ERWK +++K++ + A +DK
Sbjct: 25 PKRGLSAYMFFAQEQRDNVREENP--GISFGQVGKVLGERWKALNDKQRTPYETKAQEDK 82
Query: 69 KRYDTEMQSYTPPAGEKRG 87
KRY+ E SY A E+ G
Sbjct: 83 KRYEDEKASYNADAEEESG 101
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ +T YE A++DK RYE E
Sbjct: 29 LSAYMFFAQEQRDNVREENPGISFGQVGKVLGERWKALNDKQRTPYETKAQEDKKRYEDE 88
Query: 135 MTAY 138
+Y
Sbjct: 89 KASY 92
>gi|119568092|gb|EAW47707.1| hCG1642266, isoform CRA_b [Homo sapiens]
Length = 121
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 39/130 (30%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENV-VFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRY 71
M+AYAFF Q+CREEHKKK+PE ++ + F +
Sbjct: 1 MSAYAFFGQMCREEHKKKNPEVSLSILQNFPR---------------------------- 32
Query: 72 DTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAK--ELGKKWADVDPSVKTKYEQMAEKDKA 129
+ ++ ++P KIK NP GD+AK +LG+ W ++ + K Y K K
Sbjct: 33 -SALREFSP-------KIKSTNPGNSFGDMAKKRKLGEMWNNLSDNEKQPYIPKMAKLKE 84
Query: 130 RYEKEMTAYK 139
+YEK YK
Sbjct: 85 KYEKNAADYK 94
>gi|351704050|gb|EHB06969.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 156
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 25/112 (22%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYT-------------------PPAG------EKR 86
MS KEK +F +M D+ RYD EM++Y PP+ + R
Sbjct: 1 MSAKEKSKFEDMVKSDQARYDKEMKNYVPPKGGDKKGKKKDPNAPKRPPSAFFLFCSKYR 60
Query: 87 GKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
KIK ++P GD AK+ G+ W++ K YEQ K +YEK++ AY
Sbjct: 61 PKIKSEHPGLSTGDTAKKSGEMWSEQSAKDKQPYEQKGAKLMEKYEKDIAAY 112
>gi|302926833|ref|XP_003054372.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
gi|256735313|gb|EEU48659.1| HMG box-containing protein [Nectria haematococca mpVI 77-13-4]
Length = 101
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 24 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALNEKQRAPYEAKAAADK 81
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 82 KRYEDEKQAYN 92
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 28 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRYEDE 87
Query: 135 MTAY 138
AY
Sbjct: 88 KQAY 91
>gi|395845994|ref|XP_003795701.1| PREDICTED: uncharacterized protein LOC100940533 [Otolemur
garnettii]
Length = 515
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 27/117 (23%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGK----------------------I 89
MS KEK ++ A+ DK RY+ EM++Y PP GE + K I
Sbjct: 1 MSAKEKGKYEATAEADKARYEREMKTYIPPKGETKRKFKDPKAPKWLSWPFSCSEYHQNI 60
Query: 90 KQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE-----KEMTAYKNR 141
K ++P +GD+AK+LG+ W + YE+ A K K + E KE +NR
Sbjct: 61 KGEHPGLSIGDVAKKLGEMWNNTAVGDNQPYEKEAAKLKEKSEEDAKLKESLMQQNR 117
>gi|342874398|gb|EGU76412.1| hypothetical protein FOXB_13090 [Fusarium oxysporum Fo5176]
Length = 102
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 25 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALNEKQRAPYEAKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 83 KRYEDEKQAYN 93
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 29 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRYEDE 88
Query: 135 MTAY 138
AY
Sbjct: 89 KQAY 92
>gi|380476672|emb|CCF44585.1| non-histone chromosomal protein 6 [Colletotrichum higginsianum]
Length = 96
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK ++EK+++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKILGERWKALNEKQRQPYEAKAATDK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 84 KRYEDEKQAYN 94
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 30 LSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNEKQRQPYEAKAATDKKRYEDE 89
Query: 135 MTAY 138
AY
Sbjct: 90 KQAY 93
>gi|403332939|gb|EJY65527.1| hypothetical protein OXYTRI_14318 [Oxytricha trifallax]
Length = 772
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 19/149 (12%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
V P+ +AY F + R E ++P V E K+ A+ W +S+++K+++ + A K
Sbjct: 69 VPPKKSASAYIIFGKEKRAEILSRNPTAKVT--EVVKEIAQSWGILSKEDKQKYKDAAKK 126
Query: 67 DKKRYDTEMQS-----------------YTPPAGEKRGKIKQDNPEYGVGDIAKELGKKW 109
DK+RYD E++S Y E R I ++PE G + +E+GK+W
Sbjct: 127 DKERYDKELRSLESFSEKLKKPKKCLSAYMIFVKETRPLIVDEHPEMGALQVMQEVGKQW 186
Query: 110 ADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+ K +++ A++DK RY E A+
Sbjct: 187 QALTEEQKNYFKEKADRDKLRYLNEQRAF 215
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 2 PKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
P + KP+ ++AY +F Q RE + ++P V+ + K + RW +S+++K F
Sbjct: 319 PINSENKPKKPLSAYIYFSQEFREIIRARYPTMTVI--QVMKAVSYRWGNLSKEQKYPFE 376
Query: 62 EMADKDKKRYDTEM 75
+MA +DK+RYD E+
Sbjct: 377 QMAVEDKQRYDKEI 390
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 4 EKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
EK KP+ ++AY FV+ R +HPE + + ++ ++W+ ++E++K F E
Sbjct: 143 EKLKKPKKCLSAYMIFVKETRPLIVDEHPEMGAL--QVMQEVGKQWQALTEEQKNYFKEK 200
Query: 64 ADKDKKRYDTEMQSY---TPPAGEKRGKI 89
AD+DK RY E +++ G+K G +
Sbjct: 201 ADRDKLRYLNEQRAFYDEVEKIGQKHGTV 229
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + E R I+ P V + K + +W ++ K +EQMA +DK RY+KE
Sbjct: 330 LSAYIYFSQEFREIIRARYPTMTVIQVMKAVSYRWGNLSKEQKYPFEQMAVEDKQRYDKE 389
Query: 135 MT-----AYKNRSVAP 145
+ ++ RS P
Sbjct: 390 INDCKKGTFQGRSATP 405
>gi|148707462|gb|EDL39409.1| mCG8212 [Mus musculus]
Length = 145
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 24/100 (24%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKR---------------------GKIK 90
MS KEK +F EMA DK YD EM+ Y P G K+ KIK
Sbjct: 1 MSSKEKSKFDEMAKADKVCYDWEMKDYRPAKGGKKKDPNAPKRPPSGFFLFCSEFHPKIK 60
Query: 91 QDNPEYGVGDIAKELGKKW---ADVDPSVKTKYEQMAEKD 127
NP +GD+AK+LG+ W +D + + TK ++ EKD
Sbjct: 61 FTNPGISIGDVAKKLGEMWKNLSDSEAAYVTKAAKLKEKD 100
>gi|363755396|ref|XP_003647913.1| hypothetical protein Ecym_7252 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891949|gb|AET41096.1| hypothetical protein Ecym_7252 [Eremothecium cymbalariae
DBVPG#7215]
Length = 464
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 15/125 (12%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +AY F REE +++P+ V E SK + RWK +SE++KK F+ +
Sbjct: 295 PKRPSSAYFLFSMSIREELLRQYPDAKV--PELSKLSSARWKELSEEDKKPFYGQFKDNW 352
Query: 69 KRYDT---EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPS 115
++Y E ++ PP E R K+ +DNP+ + +I K +G++W ++
Sbjct: 353 EKYRIAKKEYEATLPPKRPSGPFIQFTSELRPKLLKDNPDKSLIEITKLVGEQWRNLPSE 412
Query: 116 VKTKY 120
K KY
Sbjct: 413 EKQKY 417
>gi|449544041|gb|EMD35015.1| hypothetical protein CERSUDRAFT_85760 [Ceriporiopsis subvermispora
B]
Length = 118
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + + R +IK +NP+ G G+I K LG KW ++D S K Y + A +DKAR E+E
Sbjct: 36 LSAYMFFSQDWRERIKAENPDAGFGEIGKLLGAKWKELDESEKKPYIEQAARDKARAEQE 95
Query: 135 MTAYKNR 141
T Y R
Sbjct: 96 KTDYDGR 102
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
++AY FF Q RE K ++P+ F E K +WK + E EKK + E A +DK R +
Sbjct: 36 LSAYMFFSQDWRERIKAENPDAG--FGEIGKLLGAKWKELDESEKKPYIEQAARDKARAE 93
Query: 73 TEMQSY 78
E Y
Sbjct: 94 QEKTDY 99
>gi|444728196|gb|ELW68660.1| High mobility group protein B1 [Tupaia chinensis]
Length = 221
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 24/110 (21%)
Query: 57 KKRFHEMADKDKKRYDTEMQSYTPPAGEK------------------------RGKIKQD 92
K++F ++A DK RY+ EM++Y PP GE R KIK +
Sbjct: 72 KRKFEDVAKVDKARYEREMKTYIPPKGEMKKKFKDPNAPKRPPSAFFLFCSEYRSKIKGE 131
Query: 93 NPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
+P GD+AK+LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 132 HPGLSNGDVAKKLGEIWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKG 181
>gi|171680363|ref|XP_001905127.1| hypothetical protein [Podospora anserina S mat+]
gi|170939808|emb|CAP65034.1| unnamed protein product [Podospora anserina S mat+]
Length = 98
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P V F + K ERWK +S+K++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GVSFGQVGKILGERWKALSDKQRAPYEAKAAADK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 84 KRYEDEKQAYN 94
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE A DK RYE E
Sbjct: 30 LSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRYEDE 89
Query: 135 MTAYKNRSVA 144
AY N S+A
Sbjct: 90 KQAY-NVSLA 98
>gi|440800418|gb|ELR21457.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 135
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
TAY + Q R + K+++P + F E +K + +W MSE+EK F E A KDKKRY+
Sbjct: 53 TAYIIYAQSARAKVKEENP--SAGFGELTKLVSAQWNAMSEEEKAPFAEEAAKDKKRYER 110
Query: 74 EMQSYTP 80
E+++ P
Sbjct: 111 EVKAADP 117
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R K+K++NP G G++ K + +W + K + + A KDK RYE+E+ A S
Sbjct: 63 RAKVKEENPSAGFGELTKLVSAQWNAMSEEEKAPFAEEAAKDKKRYEREVKAADPGS--- 119
Query: 146 VNEEADEEDDE 156
EA +EDDE
Sbjct: 120 DEGEAAKEDDE 130
>gi|444708065|gb|ELW49184.1| High mobility group protein B1 [Tupaia chinensis]
Length = 160
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 23/109 (21%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEK-----------------------RGK 88
MS KEK +F +MA DK +Y+ ++++Y P GE R K
Sbjct: 1 MSAKEKGKFEDMAKVDKAQYERKLKTYISPKGETKKFKNPSAPKRPPWAFSLFSSEYRQK 60
Query: 89 IKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
IK + +GD+AK+LG+ W + K YE+ A + K +YEK++ A
Sbjct: 61 IKGVHLGLSIGDVAKKLGEIWNNTVADDKQPYEKKAARLKEKYEKDIAA 109
>gi|70999478|ref|XP_754458.1| nucleosome binding protein (Nhp6a) [Aspergillus fumigatus Af293]
gi|74674416|sp|Q4WY33.1|NHP6_ASPFU RecName: Full=Non-histone chromosomal protein 6
gi|66852095|gb|EAL92420.1| nucleosome binding protein (Nhp6a), putative [Aspergillus
fumigatus Af293]
gi|159127475|gb|EDP52590.1| nucleosome binding protein (Nhp6a), putative [Aspergillus
fumigatus A1163]
Length = 104
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ ++++P + F + K ERWK +S+ E++ + E A DK
Sbjct: 25 PKRGLSAYMFFANENRDKVREENP--GISFGQVGKMLGERWKALSDSERRPYEEKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 83 KRYEDEKASYN 93
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R K++++NP G + K LG++W + S + YE+ A DK RYE E
Sbjct: 29 LSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDSERRPYEEKAAADKKRYEDE 88
Query: 135 MTAY 138
+Y
Sbjct: 89 KASY 92
>gi|62321053|dbj|BAD94127.1| recombination signal sequence recognition protein [Arabidopsis
thaliana]
Length = 208
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+ + FF Q+ R+ KK+HP + F E K ++W+ MS +K+ + A DK+RY
Sbjct: 128 MSGFMFFSQMERDNIKKEHP--GIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYK 185
Query: 73 TEMQSYTPP 81
E+ Y P
Sbjct: 186 DEISDYKNP 194
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
R IK+++P G++ K LG KW + K YE A+ DK RY+ E++ YKN
Sbjct: 139 RDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDYKN 193
>gi|46105649|ref|XP_380561.1| hypothetical protein FG00385.1 [Gibberella zeae PH-1]
gi|110287687|sp|Q4IQX3.1|NHP6_GIBZE RecName: Full=Non-histone chromosomal protein 6
gi|408400690|gb|EKJ79767.1| hypothetical protein FPSE_00047 [Fusarium pseudograminearum
CS3096]
Length = 101
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 24 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALNEKQRAPYEAKAAADK 81
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 82 KRYEDEKQAYN 92
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 28 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRAPYEAKAAADKKRYEDE 87
Query: 135 MTAY 138
AY
Sbjct: 88 KQAY 91
>gi|164422576|ref|XP_957906.2| hypothetical protein NCU09995 [Neurospora crassa OR74A]
gi|157069727|gb|EAA28670.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 95
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P V F + K ERWK +S+K++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GVSFGQVGKILGERWKALSDKQRAPYEAKAAADK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 84 KRYEDEKQAYN 94
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 44 KCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAK 103
K A + KT + EK+R A KD + +Y A E+R ++++NP G + K
Sbjct: 3 KAAAKSKTTGKVEKRR----AKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGK 58
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
LG++W + + YE A DK RYE E AY
Sbjct: 59 ILGERWKALSDKQRAPYEAKAAADKKRYEDEKQAY 93
>gi|121705796|ref|XP_001271161.1| nucleosome binding protein (Nhp6a), putative [Aspergillus
clavatus NRRL 1]
gi|119399307|gb|EAW09735.1| nucleosome binding protein (Nhp6a), putative [Aspergillus
clavatus NRRL 1]
Length = 104
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ ++++P + F + K ERWK +S+ E++ + E A DK
Sbjct: 25 PKRGLSAYMFFANDNRDKVREENP--GISFGQVGKMLGERWKALSDSERRPYEEKAATDK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 83 KRYEDEKASYN 93
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A + R K++++NP G + K LG++W + S + YE+ A DK RYE E
Sbjct: 29 LSAYMFFANDNRDKVREENPGISFGQVGKMLGERWKALSDSERRPYEEKAATDKKRYEDE 88
Query: 135 MTAY 138
+Y
Sbjct: 89 KASY 92
>gi|453083241|gb|EMF11287.1| HMG_box-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 109
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ ++ +P + F E K ERWK ++EK+K + A DK
Sbjct: 30 PKRGLSAYMFFANDTRDKVREDNP--GIKFGEVGKLLGERWKALNEKQKAPYEAKAAADK 87
Query: 69 KRYDTEMQSYT 79
KRY+ E +YT
Sbjct: 88 KRYEEEKAAYT 98
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 64 ADKDKKRYDTEM-----QSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKT 118
AD K++ D M +Y A + R K+++DNP G++ K LG++W ++ K
Sbjct: 18 ADGGKRKKDPNMPKRGLSAYMFFANDTRDKVREDNPGIKFGEVGKLLGERWKALNEKQKA 77
Query: 119 KYEQMAEKDKARYEKEMTAY 138
YE A DK RYE+E AY
Sbjct: 78 PYEAKAAADKKRYEEEKAAY 97
>gi|115396468|ref|XP_001213873.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
gi|114193442|gb|EAU35142.1| nonhistone chromosomal protein 6A [Aspergillus terreus NIH2624]
Length = 101
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ ++++P + F + K E+WK +SE +++ + E A DK
Sbjct: 23 PKRGLSAYMFFANENRDKVREENP--GITFGQVGKMLGEKWKALSEDDRRPYEEKAAADK 80
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 81 KRYEDEKASYN 91
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R K++++NP G + K LG+KW + + YE+ A DK RYE E
Sbjct: 27 LSAYMFFANENRDKVREENPGITFGQVGKMLGEKWKALSEDDRRPYEEKAAADKKRYEDE 86
Query: 135 MTAY 138
+Y
Sbjct: 87 KASY 90
>gi|186911840|gb|ACC95135.1| high mobility group protein [Crassostrea virginica]
Length = 105
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AY FF+ RE+ KK + AEF+K C+ +W M++K+K+ F + A DKKRYD
Sbjct: 3 SAYFFFLSKMREDSKKAGKPITKI-AEFTKDCSAKWAKMNDKDKEPFSKKAAADKKRYDA 61
Query: 74 EMQSY 78
EM Y
Sbjct: 62 EMAVY 66
>gi|357134382|ref|XP_003568796.1| PREDICTED: FACT complex subunit SSRP1-B-like isoform 1
[Brachypodium distachyon]
Length = 643
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK-NRSVA 144
R +K NP G DIAK+LG+KW + K Y + DK RY++E AY+ N A
Sbjct: 572 RANLKSSNPVLGTTDIAKKLGEKWQKMSAEEKQPYVEQHLVDKKRYQEETAAYRDNAGAA 631
Query: 145 PVNEEADEE 153
PV+ E+D++
Sbjct: 632 PVDVESDDQ 640
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
+ + +F + R K +P + +KK E+W+ MS +EK+ + E DKKRY
Sbjct: 561 LAPFMYFSKAERANLKSSNPVLGT--TDIAKKLGEKWQKMSAEEKQPYVEQHLVDKKRYQ 618
Query: 73 TEMQSYTPPAG 83
E +Y AG
Sbjct: 619 EETAAYRDNAG 629
>gi|412985385|emb|CCO18831.1| CG4797 [Bathycoccus prasinos]
Length = 669
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKAR 130
+ +Y + E R K+K++NP++ + D+AKELG +W V K KYE++A+KDK R
Sbjct: 584 LSTYMIFSAEMRAKVKEENPDFSITDVAKELGVRWKSVTDEEKVKYEELAKKDKER 639
>gi|291231769|ref|XP_002735836.1| PREDICTED: high mobility group 20 B-like [Saccoglossus kowalevskii]
Length = 546
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
E+R K+K++NPE ++ K LG +W+ + K KY + AE DK RY E+ AY+
Sbjct: 273 EQRVKVKEENPEMAFTEVTKLLGSQWSSMSAEDKQKYVEEAENDKKRYIDELKAYQ 328
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ TAY ++ R + K+++PE + F E +K +W +MS ++K+++ E A+ DK
Sbjct: 260 PKAPTTAYVLYLNEQRVKVKEENPE--MAFTEVTKLLGSQWSSMSAEDKQKYVEEAENDK 317
Query: 69 KRYDTEMQSY 78
KRY E+++Y
Sbjct: 318 KRYIDELKAY 327
>gi|444722479|gb|ELW63171.1| High mobility group protein B2 [Tupaia chinensis]
Length = 147
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 24/104 (23%)
Query: 63 MADKDKKRYDTEMQSYTPP------------------------AGEKRGKIKQDNPEYGV 98
MA DK YD EM++Y PP E KIK ++P +
Sbjct: 1 MAKSDKAHYDREMKNYVPPRGDKKGKKKDPNTPKRPPSAFFLFCSEHLPKIKSEHPGLSI 60
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
GD AK+LG+ W++ K EQ A K K +YEK++ AY+ +
Sbjct: 61 GDTAKKLGEMWSEQSAKDKQPCEQKAAKLKEKYEKDIAAYRAKG 104
>gi|443724197|gb|ELU12309.1| hypothetical protein CAPTEDRAFT_56147, partial [Capitella teleta]
Length = 196
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 20/147 (13%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ +AY F+V CR E +K+ E A+++K+ ++ W+ M+ +++K F A D
Sbjct: 22 RPKRPTSAYFFYVAHCRAECEKRG-ERITRVAQWTKEISQVWREMTPEDRKGFDAKAVVD 80
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVG------------DIAKEL----GKKWAD 111
K RY+ +M Y G + + K+ Y + + KEL G+ W
Sbjct: 81 KARYEEQMNRYK---GRDKNRPKRPQSAYFLWLAGFRTRMKDKIPVNKELLRAAGEHWKR 137
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAY 138
+ K YEQMAE ++ +YE+ M Y
Sbjct: 138 LTEVEKAPYEQMAEGERRKYEEAMRQY 164
>gi|67524855|ref|XP_660489.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|74597086|sp|Q5B995.1|NHP6_EMENI RecName: Full=Non-histone chromosomal protein 6
gi|40744280|gb|EAA63456.1| hypothetical protein AN2885.2 [Aspergillus nidulans FGSC A4]
gi|259486178|tpe|CBF83812.1| TPA: Non-histone chromosomal protein 6
[Source:UniProtKB/Swiss-Prot;Acc:Q5B995] [Aspergillus
nidulans FGSC A4]
Length = 106
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ ++++P + F + K E+WK++S+KE+K + + A DK
Sbjct: 27 PKRGLSAYMFFANDNRDKVREENP--GISFGQVGKMLGEKWKSLSDKERKPYEDKAAADK 84
Query: 69 KRYDTEMQSY 78
KRY+ E +Y
Sbjct: 85 KRYEDEKAAY 94
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A + R K++++NP G + K LG+KW + + YE A DK RYE E
Sbjct: 31 LSAYMFFANDNRDKVREENPGISFGQVGKMLGEKWKSLSDKERKPYEDKAAADKKRYEDE 90
Query: 135 MTAYK 139
AYK
Sbjct: 91 KAAYK 95
>gi|403417437|emb|CCM04137.1| predicted protein [Fibroporia radiculosa]
Length = 117
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + + R +IK +NP+ G G+I K LG KW ++D S K Y + A +DKAR EKE
Sbjct: 36 LSAYMFFSQDWRERIKAENPDAGFGEIGKLLGAKWKELDESEKKPYIEQAARDKARAEKE 95
Query: 135 MTAY 138
T Y
Sbjct: 96 KTDY 99
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
++AY FF Q RE K ++P + F E K +WK + E EKK + E A +DK R +
Sbjct: 36 LSAYMFFSQDWRERIKAENP--DAGFGEIGKLLGAKWKELDESEKKPYIEQAARDKARAE 93
Query: 73 TEMQSY 78
E Y
Sbjct: 94 KEKTDY 99
>gi|403213858|emb|CCK68360.1| hypothetical protein KNAG_0A07060 [Kazachstania naganishii CBS
8797]
Length = 643
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R + +++P+ V E SK + RWK +++ +KK F++
Sbjct: 375 KKQGPKRPSSAYFLFSMSIRNDLLQQYPDAKV--PELSKLASARWKELTDDQKKPFYDEF 432
Query: 65 DKDKKRYDT---EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ +Y E ++ PP E R I ++NPE + +I K +G++W
Sbjct: 433 RTNWDKYRVLRDEYENTLPPKRPSGPFIQFTQEIRPTIVKENPEKNLIEITKLIGERWRS 492
Query: 112 VDPSVKTKYEQMAEKDKARYEK 133
+DP KT+Y + +EK
Sbjct: 493 LDPVEKTRYTDTYKLKLKEWEK 514
>gi|45198302|ref|NP_985331.1| AFL219Wp [Ashbya gossypii ATCC 10895]
gi|44984189|gb|AAS53155.1| AFL219Wp [Ashbya gossypii ATCC 10895]
gi|374108559|gb|AEY97465.1| FAFL219Wp [Ashbya gossypii FDAG1]
Length = 182
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K+ PR YA +++ + +HP N F E S+ +WK+MS+ +KK +++ +
Sbjct: 37 KEQSPRRPPAVYALYLKSIMPSVRSEHP--NATFVELSRLANNKWKSMSDHQKKPYYDES 94
Query: 65 DKDKKRYDT---EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ K Y + E++ PP + R + ++P DI + LG+KW
Sbjct: 95 HRLFKEYHSARAEIEKTLPPKRPSTGFILFCNDVRPHVAAEHPLLKTTDIVRLLGEKWKA 154
Query: 112 VDPSVKTKYEQMAEKDK 128
+ K +Y +A +++
Sbjct: 155 LPFDKKNRYLDLAARNR 171
>gi|242021451|ref|XP_002431158.1| High mobility group protein 20A, putative [Pediculus humanus
corporis]
gi|212516407|gb|EEB18420.1| High mobility group protein 20A, putative [Pediculus humanus
corporis]
Length = 299
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ + AY +FV+ RE+ + ++P N F E +KK A+ WK++S +EK+++ + A+ DK
Sbjct: 55 PQKPLNAYNWFVKENREKIRAQNPTWN--FTEITKKLAQDWKSLSCEEKQQYIDSAENDK 112
Query: 69 KRYDTEMQSY 78
+RY E+ +Y
Sbjct: 113 ERYAKELTAY 122
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y E R KI+ NP + +I K+L + W + K +Y AE DK RY KE
Sbjct: 59 LNAYNWFVKENREKIRAQNPTWNFTEITKKLAQDWKSLSCEEKQQYIDSAENDKERYAKE 118
Query: 135 MTAYK 139
+TAYK
Sbjct: 119 LTAYK 123
>gi|407926962|gb|EKG19868.1| High mobility group HMG1/HMG2 [Macrophomina phaseolina MS6]
Length = 106
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ ++++P + F E K ERWK +SEK++ + A DK
Sbjct: 27 PKRGLSAYMFFANDMRDKVREENP--GIKFGEVGKILGERWKALSEKQRAPYEAKAANDK 84
Query: 69 KRYDTEMQSYT 79
KRY+ E +Y
Sbjct: 85 KRYEDEKAAYN 95
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A + R K++++NP G++ K LG++W + + YE A DK RYE E
Sbjct: 31 LSAYMFFANDMRDKVREENPGIKFGEVGKILGERWKALSEKQRAPYEAKAANDKKRYEDE 90
Query: 135 MTAYKNRSVAPVNEEADEEDD 155
AY N D+ED+
Sbjct: 91 KAAY--------NAGGDDEDE 103
>gi|326520880|dbj|BAJ92803.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R +K NPE DIAK+LG+KW + K Y + ++ DK RY +E AY+ AP
Sbjct: 222 RANLKNINPELSTTDIAKKLGEKWQKMSAEEKQPYLEQSQVDKKRYAEETAAYRGAGAAP 281
Query: 146 VN-EEADEEDD 155
V+ + AD D
Sbjct: 282 VDVDSADGSSD 292
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ + + +F + R K +PE + + +KK E+W+ MS +EK+ + E + DK
Sbjct: 207 PKRAIAPFMYFSKAERANLKNINPELSTT--DIAKKLGEKWQKMSAEEKQPYLEQSQVDK 264
Query: 69 KRYDTEMQSY 78
KRY E +Y
Sbjct: 265 KRYAEETAAY 274
>gi|50548527|ref|XP_501733.1| YALI0C11671p [Yarrowia lipolytica]
gi|74635076|sp|Q6CC79.1|NHP6_YARLI RecName: Full=Non-histone chromosomal protein 6
gi|49647600|emb|CAG82043.1| YALI0C11671p [Yarrowia lipolytica CLIB122]
Length = 103
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + +P + F + K E+WKT+++ EK + E A DK
Sbjct: 25 PKRALSAYMFFANDNRDAIRADNP--GIAFGQVGKALGEKWKTLTDAEKVPYEEKATADK 82
Query: 69 KRYDTEMQSYTPPAGE 84
KRY+ E +Y A E
Sbjct: 83 KRYEDEKAAYKANAAE 98
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A + R I+ DNP G + K LG+KW + + K YE+ A DK RYE E
Sbjct: 29 LSAYMFFANDNRDAIRADNPGIAFGQVGKALGEKWKTLTDAEKVPYEEKATADKKRYEDE 88
Query: 135 MTAYKNRSV 143
AYK +
Sbjct: 89 KAAYKANAA 97
>gi|365982187|ref|XP_003667927.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS
421]
gi|343766693|emb|CCD22684.1| hypothetical protein NDAI_0A05290 [Naumovozyma dairenensis CBS
421]
Length = 93
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ K ++P N+ F + K +WK ++++EK+ + + AD DK
Sbjct: 21 PKRGLSAYMFFANDNRDIVKAENP--NITFGQIGKVLGAKWKELNDEEKQPYQDKADADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A + R +K +NP G I K LG KW +++ K Y+ A+ DK RYE E
Sbjct: 25 LSAYMFFANDNRDIVKAENPNITFGQIGKVLGAKWKELNDEEKQPYQDKADADKKRYESE 84
Query: 135 MTAY 138
Y
Sbjct: 85 KELY 88
>gi|170097113|ref|XP_001879776.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645179|gb|EDR09427.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 114
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY-KNRSVA 144
R +IK +NP+ G G++ K LG KW ++D K Y + A KDK R E+ AY N+ A
Sbjct: 46 RDRIKAENPDAGFGEVGKLLGAKWKELDEEEKKPYVEQASKDKTRAEEAKAAYDSNKKSA 105
Query: 145 PVNEEADEE 153
+EE DEE
Sbjct: 106 SGDEEEDEE 114
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ ++AY FF Q R+ K ++P + F E K +WK + E+EKK + E A KD
Sbjct: 30 KPKRALSAYMFFSQDWRDRIKAENP--DAGFGEVGKLLGAKWKELDEEEKKPYVEQASKD 87
Query: 68 KKRYDTEMQSY 78
K R + +Y
Sbjct: 88 KTRAEEAKAAY 98
>gi|358379174|gb|EHK16855.1| hypothetical protein TRIVIDRAFT_217092 [Trichoderma virens
Gv29-8]
Length = 102
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +++K++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALNDKQRAPYEAKAAADK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 84 KRYEDEKQAYN 94
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 30 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAPYEAKAAADKKRYEDE 89
Query: 135 MTAY 138
AY
Sbjct: 90 KQAY 93
>gi|406862701|gb|EKD15750.1| nucleosome binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 102
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +++K++ + A +DK
Sbjct: 25 PKRGLSAYMFFANEQRENVREENP--GITFGQVGKVLGERWKALNDKQRTPYEAKAAQDK 82
Query: 69 KRYDTEMQSYTPPAGE 84
KRY+ E SY A E
Sbjct: 83 KRYEDEKASYNADAEE 98
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ +T YE A +DK RYE E
Sbjct: 29 LSAYMFFANEQRENVREENPGITFGQVGKVLGERWKALNDKQRTPYEAKAAQDKKRYEDE 88
Query: 135 MTAY 138
+Y
Sbjct: 89 KASY 92
>gi|384493812|gb|EIE84303.1| hypothetical protein RO3G_09013 [Rhizopus delemar RA 99-880]
Length = 252
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ + Y F+ R + K+ P + F E SK ERWK +S+ EKK ++EMA K+K
Sbjct: 61 PKQPTSNYLFYCNSIRADVDKEFP--SASFVEKSKIYGERWKKLSDAEKKPYNEMAQKEK 118
Query: 69 KRYDTEMQSYTPPAGE-KRGKIKQDNPE 95
+RY+ E+++Y G K+ K ++ PE
Sbjct: 119 ERYNRELETYEKNHGVIKKAKTEKAKPE 146
>gi|119187239|ref|XP_001244226.1| hypothetical protein CIMG_03667 [Coccidioides immitis RS]
gi|303317166|ref|XP_003068585.1| Nonhistone chromosomal protein 6B, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240108266|gb|EER26440.1| Nonhistone chromosomal protein 6B, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320038503|gb|EFW20438.1| nucleosome binding protein Nhp6a [Coccidioides posadasii str.
Silveira]
gi|392870942|gb|EAS32789.2| non-histone chromosomal protein 6 [Coccidioides immitis RS]
Length = 102
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +S+K++ + E A DK
Sbjct: 25 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALSDKQRAPYEEKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E +Y
Sbjct: 83 KRYEDEKANYN 93
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE+ A DK RYE E
Sbjct: 29 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALSDKQRAPYEEKAAADKKRYEDE 88
Query: 135 MTAY 138
Y
Sbjct: 89 KANY 92
>gi|358391632|gb|EHK41036.1| hypothetical protein TRIATDRAFT_259074 [Trichoderma atroviride
IMI 206040]
Length = 101
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +++K++ + A DK
Sbjct: 25 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALNDKQRAPYEAKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 83 KRYEDEKQAYN 93
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 29 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAPYEAKAAADKKRYEDE 88
Query: 135 MTAY 138
AY
Sbjct: 89 KQAY 92
>gi|429860623|gb|ELA35353.1| nucleosome binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 103
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +++K++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKILGERWKALNDKQRAPYEAKAAADK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 84 KRYEDEKQAYN 94
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 30 LSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQRAPYEAKAAADKKRYEDE 89
Query: 135 MTAYKNRSVAPVNEEADEEDDE 156
AY AD+E+DE
Sbjct: 90 KQAY----------NADQEEDE 101
>gi|351700745|gb|EHB03664.1| High mobility group protein 20A [Heterocephalus glaber]
Length = 570
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
PR T Y F+ R + + K+P+ + F E +K A +W +S++ K+R+ AD+DK
Sbjct: 231 PRAPTTGYVIFLNEQRSQLRAKYPD--LPFTEITKILAAQWAQLSQERKQRYIYEADEDK 288
Query: 69 KRYDTEMQSY 78
+RY E+Q+Y
Sbjct: 289 QRYIRELQAY 298
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
E+R +++ P+ +I K L +WA + K +Y A++DK RY +E+ AY++
Sbjct: 244 EQRSQLRAKYPDLPFTEITKILAAQWAQLSQERKQRYIYEADEDKQRYIRELQAYQS 300
>gi|440797991|gb|ELR19065.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 309
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +AY +F R E K ++PE + F + +KK AE WK +S ++K+++ EMA +D+
Sbjct: 167 PKRARSAYIYFTSDKRAEVKAQNPE--LKFGDVTKKLAEAWKALSPEDKQKYEEMARQDR 224
Query: 69 KRYDTEMQSYT 79
+R+D E T
Sbjct: 225 ERFDDEKNGNT 235
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+KR ++K NPE GD+ K+L + W + P K KYE+MA +D+ R++ E
Sbjct: 180 DKRAEVKAQNPELKFGDVTKKLAEAWKALSPEDKQKYEEMARQDRERFDDE 230
>gi|334261581|gb|AEG74031.1| HMGbox protein [Pellia endiviifolia (species B)]
gi|334261589|gb|AEG74035.1| HMGbox protein [Pellia endiviifolia (species B)]
Length = 120
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 55 KEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP 114
KE+KR ++ KDK+R + Y ++R +I++ NP GDI + LG +W ++
Sbjct: 35 KEEKRIRKV--KDKRRPKRALGPYMYFCKDQRKEIQEQNPTMSFGDIGRVLGSQWGKLNE 92
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYKNR 141
K KY + A+ DK RY KEM YK R
Sbjct: 93 KEKQKYIRKAQTDKRRYVKEMKRYKPR 119
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ + Y +F + R+E ++++P + F + + +W ++EKEK+++ A D
Sbjct: 48 RPKRALGPYMYFCKDQRKEIQEQNP--TMSFGDIGRVLGSQWGKLNEKEKQKYIRKAQTD 105
Query: 68 KKRYDTEMQSYTP 80
K+RY EM+ Y P
Sbjct: 106 KRRYVKEMKRYKP 118
>gi|444729825|gb|ELW70228.1| High mobility group protein B1 [Tupaia chinensis]
Length = 141
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 24/104 (23%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEK------------------------RGKIKQDNPEYGV 98
MA +K RY++EM++ PP GE R +IK + P +
Sbjct: 1 MAKANKTRYESEMKTDIPPKGETKKKFKDPSAPKRPPSAFFLFCSEYRPEIKGERPGRFI 60
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
GD+AK LG+ W + K YE+ A K K +YEK++ AY+ +
Sbjct: 61 GDVAKRLGEMWNNTAADGKQPYEKNAAKLKGKYEKDIAAYRAKG 104
>gi|452839855|gb|EME41794.1| hypothetical protein DOTSEDRAFT_74007 [Dothistroma septosporum
NZE10]
Length = 108
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ + +P + F E K+ E+WK +SEK+K + A DK
Sbjct: 30 PKRGLSAYMFFANEQRDKVRDDNP--GIKFGEVGKQLGEKWKGLSEKQKAPYEAKAAADK 87
Query: 69 KRYDTEMQSYT 79
KRY+ E +YT
Sbjct: 88 KRYEEEKAAYT 98
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R K++ DNP G++ K+LG+KW + K YE A DK RYE+E
Sbjct: 34 LSAYMFFANEQRDKVRDDNPGIKFGEVGKQLGEKWKGLSEKQKAPYEAKAAADKKRYEEE 93
Query: 135 MTAY 138
AY
Sbjct: 94 KAAY 97
>gi|336366372|gb|EGN94719.1| hypothetical protein SERLA73DRAFT_187779 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379042|gb|EGO20198.1| hypothetical protein SERLADRAFT_477580 [Serpula lacrymans var.
lacrymans S7.9]
Length = 119
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR--SV 143
R +IK +NP+ G G++ K LG KW ++D S K Y ++A KDKAR E+E A
Sbjct: 48 RERIKAENPDAGFGEVGKLLGAKWKELDESEKKPYVELAAKDKARAEEEKAALAQSKSGG 107
Query: 144 APVNEEADEEDD 155
EADE+DD
Sbjct: 108 GSGEGEADEDDD 119
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ ++AY FF Q RE K ++P + F E K +WK + E EKK + E+A
Sbjct: 29 KGTGPKRALSAYMFFSQDWRERIKAENP--DAGFGEVGKLLGAKWKELDESEKKPYVELA 86
Query: 65 DKDKKRYDTE 74
KDK R + E
Sbjct: 87 AKDKARAEEE 96
>gi|169610541|ref|XP_001798689.1| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
gi|160702095|gb|EAT84650.2| hypothetical protein SNOG_08374 [Phaeosphaeria nodorum SN15]
Length = 106
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R K+++DNP G++ K LG+KW ++ +T YE A DK RYE+E
Sbjct: 32 LSAYMFFANEQRDKVREDNPGIKFGEVGKMLGEKWKALNEKQRTPYEAKAAADKKRYEEE 91
Query: 135 MTAYK 139
AY+
Sbjct: 92 KAAYQ 96
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 21/97 (21%)
Query: 1 MPKEKDVKPRGR-------------------MTAYAFFVQVCREEHKKKHPEENVVFAEF 41
MPKEK + +GR ++AY FF R++ ++ +P + F E
Sbjct: 1 MPKEKVTRGKGRATKADGGKKKKDPNAPKRGLSAYMFFANEQRDKVREDNP--GIKFGEV 58
Query: 42 SKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
K E+WK ++EK++ + A DKKRY+ E +Y
Sbjct: 59 GKMLGEKWKALNEKQRTPYEAKAAADKKRYEEEKAAY 95
>gi|194767499|ref|XP_001965853.1| GF20526 [Drosophila ananassae]
gi|190618453|gb|EDV33977.1| GF20526 [Drosophila ananassae]
Length = 98
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/24 (83%), Positives = 23/24 (95%)
Query: 19 FVQVCREEHKKKHPEENVVFAEFS 42
FVQ+CREEHKKKHP+E V+FAEFS
Sbjct: 75 FVQICREEHKKKHPDETVIFAEFS 98
>gi|340520749|gb|EGR50985.1| predicted protein [Trichoderma reesei QM6a]
Length = 83
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +++K++ + A DK
Sbjct: 7 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALNDKQRAPYEAKAAADK 64
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 65 KRYEDEKQAYN 75
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 11 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNDKQRAPYEAKAAADKKRYEDE 70
Query: 135 MTAY 138
AY
Sbjct: 71 KQAY 74
>gi|260828085|ref|XP_002608994.1| hypothetical protein BRAFLDRAFT_124005 [Branchiostoma floridae]
gi|229294348|gb|EEN65004.1| hypothetical protein BRAFLDRAFT_124005 [Branchiostoma floridae]
Length = 410
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y ++ RE+ K +HPE + F E ++ RW +S+++K+++ + A+ DK
Sbjct: 144 PKAPVTGYVLYLTEQREKLKVEHPE--LPFTEMTRLLGSRWSALSQEDKQKYLDAAEVDK 201
Query: 69 KRYDTEMQSY 78
+RY E+++Y
Sbjct: 202 RRYIEELKAY 211
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 78 YTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTA 137
Y E+R K+K ++PE ++ + LG +W+ + K KY AE DK RY +E+ A
Sbjct: 151 YVLYLTEQREKLKVEHPELPFTEMTRLLGSRWSALSQEDKQKYLDAAEVDKRRYIEELKA 210
Query: 138 YK 139
Y+
Sbjct: 211 YQ 212
>gi|428174395|gb|EKX43291.1| hypothetical protein GUITHDRAFT_163895 [Guillardia theta CCMP2712]
Length = 177
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 41/172 (23%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEK--------KR 59
+P+ M+A+ F + R+E K+ +PE + F E +K A +WK ++E+EK KR
Sbjct: 5 RPKRPMSAWLLFCEAKRDEVKRDNPE--IAFTEINKVIAGKWKALTEEEKKPFEEEAAKR 62
Query: 60 FHEMADK-------------DKKRYD------------------TEMQSYTPPAGEKRGK 88
F E K +++ YD +Y R
Sbjct: 63 FEEYKGKKALYEAECGDVYYNRRVYDEPEYTGKRRRVKDVNAPKKGQNAYMLWCHSVRED 122
Query: 89 IKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
+++ NPE + DI +ELG+KW D+DPS K K+E+ A++D+ R+ +E Y++
Sbjct: 123 LRKANPEMPMKDILRELGQKWKDLDPSEKEKWEEKAKEDRDRFLREKEEYES 174
>gi|195382097|ref|XP_002049768.1| GJ21774 [Drosophila virilis]
gi|194144565|gb|EDW60961.1| GJ21774 [Drosophila virilis]
Length = 729
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ TA+ ++ RE+ K+ +P + E +KK E WK + K+K ++ E+A KD
Sbjct: 558 KPKRATTAFMLWLNDTREQIKRDNP--GIKVTEIAKKGGEMWKEL--KDKSKWEEIAAKD 613
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNP 94
++RY EM++Y P AG G +D+P
Sbjct: 614 RQRYQDEMRNYKPGAGA--GSDDEDSP 638
>gi|310793467|gb|EFQ28928.1| HMG box protein [Glomerella graminicola M1.001]
Length = 103
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +++K++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKILGERWKALNDKQRAPYEAKAATDK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 84 KRYEDEKQAYN 94
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 30 LSAYMFFANEQRENVREENPGISFGQVGKILGERWKALNDKQRAPYEAKAATDKKRYEDE 89
Query: 135 MTAY 138
AY
Sbjct: 90 KQAY 93
>gi|183212221|gb|ACC54773.1| high-mobility group box 1 beta [Xenopus borealis]
Length = 95
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 24/92 (26%)
Query: 55 KEKKRFHEMADKDKKRYDTEMQSYTPPAGEK------------------------RGKIK 90
KEK +F +MA DK RY+ EM++Y PP GE R KIK
Sbjct: 3 KEKSKFEDMAKADKVRYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSDFRPKIK 62
Query: 91 QDNPEYGVGDIAKELGKKWADVDPSVKTKYEQ 122
+ P +GDIAK+LG+ W + K YE+
Sbjct: 63 GEYPGSTIGDIAKKLGEMWNNTATDDKLPYER 94
>gi|366987315|ref|XP_003673424.1| hypothetical protein NCAS_0A04790 [Naumovozyma castellii CBS 4309]
gi|342299287|emb|CCC67037.1| hypothetical protein NCAS_0A04790 [Naumovozyma castellii CBS 4309]
Length = 555
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ P+ V E SK + RWK +++ EKK F+E
Sbjct: 339 KKQGPKRPSSAYFLFSMSIRNELLEQFPDAKV--PELSKLASARWKELTDDEKKPFYEEF 396
Query: 65 DKDKKRYD---TEMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y E + PP E R I ++NP+ + +I K +G+KW +
Sbjct: 397 RTNWEKYRLLRDEYEKTLPPKRPSGPFIQFTQEIRPTIVKENPDKNLIEITKIIGEKWRE 456
Query: 112 VDPSVKTKYEQMAEKDKARYEK 133
+DP K Y + ++ +EK
Sbjct: 457 LDPEKKAAYTETYKRRLKEWEK 478
>gi|75218951|sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein 1
gi|2104679|emb|CAA66480.1| transcription factor [Vicia faba var. minor]
Length = 642
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+R +K+ NP D+ + LG+KW ++ K YE A+ DK RY+ E++ YKN
Sbjct: 572 ERENLKKTNPGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQADKKRYKDEISGYKNPQ-- 629
Query: 145 PVNEEADEEDD 155
P+N ++ E D
Sbjct: 630 PMNVDSGNESD 640
>gi|189205162|ref|XP_001938916.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923152|ref|XP_003300124.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
gi|187986015|gb|EDU51503.1| non-histone chromosomal protein 6 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325919|gb|EFQ91802.1| hypothetical protein PTT_11280 [Pyrenophora teres f. teres 0-1]
Length = 106
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R K+++DNP G++ K LG+KW ++ +T YE A DK RYE+E
Sbjct: 32 LSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRTPYEAKAAADKKRYEEE 91
Query: 135 MTAYK 139
AY+
Sbjct: 92 KAAYQ 96
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE+ ++ +P + F E K E+WK ++EK++ + A DK
Sbjct: 28 PKRGLSAYMFFANEQREKVREDNP--GIKFGEVGKLLGEKWKALNEKQRTPYEAKAAADK 85
Query: 69 KRYDTEMQSY 78
KRY+ E +Y
Sbjct: 86 KRYEEEKAAY 95
>gi|384499401|gb|EIE89892.1| hypothetical protein RO3G_14603 [Rhizopus delemar RA 99-880]
Length = 352
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY +++ R + K P NV + SK CAE+W TM+++E+ + A DK
Sbjct: 201 PKHPLSAYMWYLTEVRPKTMKSFPSSNV--GQISKYCAEKWHTMTDEERAPWKTKAQVDK 258
Query: 69 KRYDTEMQSY 78
+RY EMQ Y
Sbjct: 259 ERYAREMQLY 268
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 49/171 (28%)
Query: 15 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK------ 68
AY F + R K + P NV E SK+ AERW+ MS++EK+ + A++ K
Sbjct: 100 AYLLFNKKMRRVLKDQDPTMNV--GEISKQIAERWRKMSKEEKEMYVNEANRLKQEQRAL 157
Query: 69 -------KRYDTEMQ----------------------------------SYTPPAGEKRG 87
+R E++ +Y E R
Sbjct: 158 HPNSMYIRRSRAELKEAGKMIKEEPSDKKTARRVKKKIKSPGIPKHPLSAYMWYLTEVRP 217
Query: 88 KIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
K + P VG I+K +KW + + ++ A+ DK RY +EM Y
Sbjct: 218 KTMKSFPSSNVGQISKYCAEKWHTMTDEERAPWKTKAQVDKERYAREMQLY 268
>gi|440801325|gb|ELR22345.1| HMG (high mobility group) box domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 84
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ SY E+R K NP+ G+ DI K +G+ W D+ + + +YE MA DKARY E
Sbjct: 10 LSSYLCFCQEERETFKAQNPDAGMTDILKLMGEAWKDMPQAQRARYEAMAAADKARYTAE 69
Query: 135 MTA 137
+ +
Sbjct: 70 LAS 72
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
M EK KP +++Y F Q RE K ++P+ + + K E WK M + ++ R+
Sbjct: 1 MSAEKVKKP---LSSYLCFCQEERETFKAQNPDAGMT--DILKLMGEAWKDMPQAQRARY 55
Query: 61 HEMADKDKKRYDTEMQS 77
MA DK RY E+ S
Sbjct: 56 EAMAAADKARYTAELAS 72
>gi|402077455|gb|EJT72804.1| non-histone chromosomal protein 6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+ P+ ++AY FF RE ++++P V F + K ERWK +S+K++ + A
Sbjct: 22 LAPKRGLSAYMFFANEQRENVREENP--GVSFGQVGKILGERWKALSDKQRAPYDAKAAA 79
Query: 67 DKKRYDTEMQSYT 79
DKKRY+ E +Y
Sbjct: 80 DKKRYEDEKAAYN 92
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + Y+ A DK RYE E
Sbjct: 28 LSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDKQRAPYDAKAAADKKRYEDE 87
Query: 135 MTAY 138
AY
Sbjct: 88 KAAY 91
>gi|116206850|ref|XP_001229234.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183315|gb|EAQ90783.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 96
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P V F + K ERWK +S+K++ + A DK
Sbjct: 25 PKRGLSAYMFFANEQRDNVREENP--GVSFGQVGKILGERWKALSDKQRAPYEAKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E Q+Y
Sbjct: 83 KRYEDEKQAYN 93
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE A DK RYE E
Sbjct: 29 LSAYMFFANEQRDNVREENPGVSFGQVGKILGERWKALSDKQRAPYEAKAAADKKRYEDE 88
Query: 135 MTAYKNRSV 143
AY N SV
Sbjct: 89 KQAY-NVSV 96
>gi|328866753|gb|EGG15136.1| hypothetical protein DFA_09960 [Dictyostelium fasciculatum]
Length = 244
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 4 EKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
E+ KP+ + A++ +V+ VV E K +E +K + + K ++ +
Sbjct: 80 ERANKPKSFVNAWSIYVKTNFAN------SHGVVTKEKMKPLSESFKLLDQSSKNKYVDA 133
Query: 64 ADKDKKRYDTEMQS-----------YTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADV 112
A + K+ E Q+ Y ++ + KQ DI K + +W +
Sbjct: 134 AAQHNKKIAEENQTKLVKPKKPLTPYIQFFITQKSQFKQGTDRTNFADITKNVATQWNAL 193
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEADEEDD 155
P K YEQ+++KD RYE E++ Y+++ A V + + ++
Sbjct: 194 TPEQKQPYEQLSQKDNTRYENELSHYQSKFNAAVQQLLNATNN 236
>gi|225556517|gb|EEH04805.1| non-histone chromosomal protein 6 [Ajellomyces capsulatus G186AR]
Length = 102
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 25 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKVLGERWKALNEKQRAPYEAKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 83 KRYEDEKASYN 93
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 53 SEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADV 112
S K K R E KD + +Y A E+R ++++NP G + K LG++W +
Sbjct: 7 SRKTKPRSIEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKAL 66
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEADEEDDE 156
+ + YE A DK RYE E +Y A +EDDE
Sbjct: 67 NEKQRAPYEAKAAADKKRYEDEKASY----------NAQDEDDE 100
>gi|242781691|ref|XP_002479852.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781695|ref|XP_002479853.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|242781700|ref|XP_002479854.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218719999|gb|EED19418.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720000|gb|EED19419.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
gi|218720001|gb|EED19420.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
stipitatus ATCC 10500]
Length = 103
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE + ++P + F +K E WK +S+ E+K + + A DK
Sbjct: 25 PKRGLSAYMFFANENRERVRDENP--GIAFGALGRKLGELWKGLSDAERKPYEDKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ + SY
Sbjct: 83 KRYEDQKASYL 93
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R +++ +NP G + ++LG+ W + + + YE A DK RYE +
Sbjct: 29 LSAYMFFANENRERVRDENPGIAFGALGRKLGELWKGLSDAERKPYEDKAAADKKRYEDQ 88
Query: 135 MTAY 138
+Y
Sbjct: 89 KASY 92
>gi|154284354|ref|XP_001542972.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|150406613|gb|EDN02154.1| nucleosome binding protein [Ajellomyces capsulatus NAm1]
gi|240273630|gb|EER37150.1| nucleosome binding protein [Ajellomyces capsulatus H143]
gi|325087527|gb|EGC40837.1| nucleosome binding protein [Ajellomyces capsulatus H88]
Length = 102
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 25 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKVLGERWKALNEKQRAPYEAKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 83 KRYEDEKASYN 93
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 53 SEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADV 112
S K K R E KD + +Y A E+R ++++NP G + K LG++W +
Sbjct: 7 SRKTKARSIEKKKKDPNAPKRGLSAYMFFANEQRENVREENPGISFGQVGKVLGERWKAL 66
Query: 113 DPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEADEEDDE 156
+ + YE A DK RYE E +Y A +EDDE
Sbjct: 67 NEKQRAPYEAKAAADKKRYEDEKASY----------NAQDEDDE 100
>gi|119491564|ref|XP_001263303.1| nucleosome binding protein (Nhp6a), putative [Neosartorya
fischeri NRRL 181]
gi|119411463|gb|EAW21406.1| nucleosome binding protein (Nhp6a), putative [Neosartorya
fischeri NRRL 181]
Length = 104
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ ++++P + F + K ERWK +S+ +++ + E A DK
Sbjct: 25 PKRGLSAYMFFANENRDKVREENP--GISFGQVGKMLGERWKALSDTDRRPYEEKAAADK 82
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 83 KRYEDEKASYN 93
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R K++++NP G + K LG++W + + + YE+ A DK RYE E
Sbjct: 29 LSAYMFFANENRDKVREENPGISFGQVGKMLGERWKALSDTDRRPYEEKAAADKKRYEDE 88
Query: 135 MTAY 138
+Y
Sbjct: 89 KASY 92
>gi|118343940|ref|NP_001071792.1| transcription factor protein [Ciona intestinalis]
gi|70570753|dbj|BAE06615.1| transcription factor protein [Ciona intestinalis]
Length = 310
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 25/145 (17%)
Query: 14 TAYAFFVQVCREEHKKKH---PEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKR 70
TAY +FV RE K+ P+ ++ ++ CAE+W+ M+E+EK+ F E++ +D++R
Sbjct: 58 TAYLYFVSKYRETLKEAGEVVPKAKII----TQACAEKWRNMNEEEKEPFLELSRRDRER 113
Query: 71 YDTEMQSYTPPAGEKRGK------------IKQDNPEYGVGDIAKELGKK----WADVDP 114
+ + P R K +++ P G D AKE+ KK W +
Sbjct: 114 WQKDKALEKKPRDPNRPKRPPSAYFLFLADFRKNYP--GKSDPAKEITKKAGEAWNSLSD 171
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYK 139
+ KT Y + A+ +A++E+++ AYK
Sbjct: 172 AEKTPYYRSAQLVRAKWEQDLEAYK 196
>gi|195123163|ref|XP_002006078.1| GI18750 [Drosophila mojavensis]
gi|193911146|gb|EDW10013.1| GI18750 [Drosophila mojavensis]
Length = 734
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ TA+ ++ RE+ K+ +P + E +KK E WK + K+K ++ E+A KD
Sbjct: 560 KPKRPTTAFMLWLSETREQIKRDNP--GIKVTEIAKKGGEMWKEL--KDKSKWEELASKD 615
Query: 68 KKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKT 118
K+RY M++Y P AG G D+ E K K+ +DV P+ K+
Sbjct: 616 KQRYQDAMRNYKPGAG---GDAASDDDETSSSKAPK---KRSSDVSPTKKS 660
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
E R +IK+DNP V +IAK+ G+ W ++ K+K+E++A KDK RY+ M YK
Sbjct: 574 ETREQIKRDNPGIKVTEIAKKGGEMWKELKD--KSKWEELASKDKQRYQDAMRNYK 627
>gi|146412508|ref|XP_001482225.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
gi|146392989|gb|EDK41147.1| hypothetical protein PGUG_05245 [Meyerozyma guilliermondii ATCC
6260]
Length = 90
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R I+ +NP G + K LG+KW ++ K YE AE DK RYEKE
Sbjct: 21 LSAYMFFANENRDIIRAENPGIAFGQVGKLLGEKWKAMNADEKVPYETKAEADKKRYEKE 80
Query: 135 MTAYKNRSVA 144
Y R+ A
Sbjct: 81 KAEYAKRNSA 90
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P + F + K E+WK M+ EK + A+ DK
Sbjct: 17 PKRSLSAYMFFANENRDIIRAENP--GIAFGQVGKLLGEKWKAMNADEKVPYETKAEADK 74
Query: 69 KRYDTEMQSYT 79
KRY+ E Y
Sbjct: 75 KRYEKEKAEYA 85
>gi|296810682|ref|XP_002845679.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
gi|238843067|gb|EEQ32729.1| non-histone chromosomal protein 6 [Arthroderma otae CBS 113480]
Length = 103
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 50 KTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKW 109
K+ + K K R E KD + +Y A E+R ++++NP G + K LG++W
Sbjct: 5 KSTARKAKGRGVEKKKKDPNAPKRGLSAYMIFANEQRAAVREENPNITFGQVGKVLGERW 64
Query: 110 ADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
+ + YE+ A DK RYE E AY +R
Sbjct: 65 KALSDKQRVPYEEKAATDKQRYEDEKAAYNSR 96
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY F R ++++P N+ F + K ERWK +S+K++ + E A DK
Sbjct: 26 PKRGLSAYMIFANEQRAAVREENP--NITFGQVGKVLGERWKALSDKQRVPYEEKAATDK 83
Query: 69 KRYDTEMQSYT 79
+RY+ E +Y
Sbjct: 84 QRYEDEKAAYN 94
>gi|302762326|ref|XP_002964585.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
gi|300168314|gb|EFJ34918.1| hypothetical protein SELMODRAFT_166865 [Selaginella moellendorffii]
Length = 647
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++ + +F RE KK P + F + +K ERWK MS+ EK+ F A DK
Sbjct: 564 PKRALSGFMYFSLAERENLKKSTP--GISFKDVAKTLGERWKAMSKDEKEPFESQARVDK 621
Query: 69 KRYDTEMQSY 78
+RY +MQ Y
Sbjct: 622 ERYTKQMQGY 631
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R +K+ P D+AK LG++W + K +E A DK RY K+M Y N+ A
Sbjct: 579 RENLKKSTPGISFKDVAKTLGERWKAMSKDEKEPFESQARVDKERYTKQMQGY-NKGNAG 637
Query: 146 VNEEADEEDD 155
+ DE D
Sbjct: 638 GSTADDESSD 647
>gi|255713480|ref|XP_002553022.1| KLTH0D06908p [Lachancea thermotolerans]
gi|238934402|emb|CAR22584.1| KLTH0D06908p [Lachancea thermotolerans CBS 6340]
Length = 381
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 15/125 (12%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +AY F RE+ +++P+ V E SK + +WK MS+++KK +H ++
Sbjct: 229 PKRPSSAYFLFSMAVREDLVREYPDAKV--PELSKLASAKWKEMSDEDKKPYHVKFKENW 286
Query: 69 KRYDT---EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPS 115
++Y E +S PP E R +I ++NP+ + +I K +G+KW + P
Sbjct: 287 EKYRIARKEYESSLPPKRPSGPFIQFTQEVRPQIIRENPQKDLIEITKLIGEKWRSLSPV 346
Query: 116 VKTKY 120
K Y
Sbjct: 347 DKRTY 351
>gi|351705938|gb|EHB08857.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 176
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 24/104 (23%)
Query: 63 MADKDKKRYDTEMQSYTPPAGEKR------------------------GKIKQDNPEYGV 98
MA DK Y+ EM++Y PP GE + KIK ++P +
Sbjct: 1 MAKGDKAHYEREMKTYIPPKGEAKKKFKDPNAPKRPPSTFFLFCSEYCPKIKGEHPGLSI 60
Query: 99 GDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
GD+AK+L + W + K YE+ A K K YEK++ AY+ +
Sbjct: 61 GDVAKKLEEMWNNAAADDKQPYEKKAAKLKENYEKDIAAYRAKG 104
>gi|328769557|gb|EGF79601.1| hypothetical protein BATDEDRAFT_89692 [Batrachochytrium
dendrobatidis JAM81]
Length = 99
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
E R +I+++NP+ GD+ K LG W +++ K Y A++DK RYE+EM+ YK
Sbjct: 42 ENRPRIREENPDASFGDLGKLLGAAWRELNDKDKQVYTDKADEDKGRYEREMSTYK 97
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ F + R ++++P+ + F + K W+ +++K+K+ + + AD+DK
Sbjct: 29 PKRPLSAFMIFSKENRPRIREENPDAS--FGDLGKLLGAAWRELNDKDKQVYTDKADEDK 86
Query: 69 KRYDTEMQSYTP 80
RY+ EM +Y P
Sbjct: 87 GRYEREMSTYKP 98
>gi|302814252|ref|XP_002988810.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
gi|300143381|gb|EFJ10072.1| hypothetical protein SELMODRAFT_159743 [Selaginella moellendorffii]
Length = 647
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++ + +F RE KK P + F + +K ERWK MS+ EK+ F A DK
Sbjct: 564 PKRALSGFMYFSLAERENLKKSTP--GISFKDVAKTLGERWKAMSKDEKEPFESQARVDK 621
Query: 69 KRYDTEMQSY 78
+RY +MQ Y
Sbjct: 622 ERYTKQMQGY 631
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R +K+ P D+AK LG++W + K +E A DK RY K+M Y N+ A
Sbjct: 579 RENLKKSTPGISFKDVAKTLGERWKAMSKDEKEPFESQARVDKERYTKQMQGY-NKGNAG 637
Query: 146 VNEEADEEDD 155
+ DE D
Sbjct: 638 GSTADDESSD 647
>gi|219116576|ref|XP_002179083.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409850|gb|EEC49781.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 75
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
M S+ E R KIKQ+NP+ G++ K+ G+ + + + K KYE+MA+ DK R+++E
Sbjct: 10 MTSFFYFLNEMRPKIKQENPDMSFGELGKKAGELFRALSTNQKEKYEKMAKSDKLRFKEE 69
Query: 135 MTAY 138
M+ Y
Sbjct: 70 MSKY 73
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ MT++ +F+ R + K+++P+ + F E KK E ++ +S +K+++ +MA DK
Sbjct: 6 PKKAMTSFFYFLNEMRPKIKQENPD--MSFGELGKKAGELFRALSTNQKEKYEKMAKSDK 63
Query: 69 KRYDTEMQSYT 79
R+ EM Y
Sbjct: 64 LRFKEEMSKYN 74
>gi|365991581|ref|XP_003672619.1| hypothetical protein NDAI_0K01850 [Naumovozyma dairenensis CBS 421]
gi|343771395|emb|CCD27376.1| hypothetical protein NDAI_0K01850 [Naumovozyma dairenensis CBS 421]
Length = 631
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R ++ P+ V E SK + RWK +++ EKK +++
Sbjct: 380 KKQGPKRPSSAYFLFSMSIRNTLLQQFPDAKV--PELSKLASARWKELTDVEKKPYYDEF 437
Query: 65 DKDKKRYDT---EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ +Y E + PP E R +I ++NP+ + +I K +G+KW +
Sbjct: 438 RTNWDKYRILRDEYEKTLPPKRPSGPFIQFTQEIRPQIVKENPDKNLIEITKIIGEKWRE 497
Query: 112 VDPSVKTKYEQMAEKDKARYEK 133
+DP+ K +Y + +K +EK
Sbjct: 498 LDPTKKAEYTETYKKRLKEWEK 519
>gi|340992807|gb|EGS23362.1| hypothetical protein CTHT_0010300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 104
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P + F + K ERWK +++K++ + A DK
Sbjct: 25 PKRGLSAYMFFANEQRDNVREENP--GISFGQVGKILGERWKALTDKQRAPYEAKAAADK 82
Query: 69 KRYDTEMQSYTPPA 82
KRY+ E Q+Y A
Sbjct: 83 KRYEDEKQAYNAQA 96
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE A DK RYE E
Sbjct: 29 LSAYMFFANEQRDNVREENPGISFGQVGKILGERWKALTDKQRAPYEAKAAADKKRYEDE 88
Query: 135 MTAYKNRSVAPVNEEADEEDD 155
AY N +AD +DD
Sbjct: 89 KQAY--------NAQADGDDD 101
>gi|1870104|emb|CAA85042.1| NHP6B [Saccharomyces cerevisiae]
Length = 99
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ R++AY FF R+ + ++P+ V F + + ERWK ++ +EK+ + A DK
Sbjct: 27 PKRRLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYESKAQADK 84
Query: 69 KRYDTEMQSY 78
KRY++E + Y
Sbjct: 85 KRYESEKELY 94
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + + LG++W + K YE A+ DK RYE E
Sbjct: 31 LSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEKQPYESKAQADKKRYESE 90
Query: 135 MTAY 138
Y
Sbjct: 91 KELY 94
>gi|448079731|ref|XP_004194450.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359375872|emb|CCE86454.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 52 MSEKEKKRFHEMADKDKKRYDT---EMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKK 108
MS EKKR A + KK D + +Y A E R ++ +NP G + K LG+K
Sbjct: 1 MSTTEKKR----ASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEK 56
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
W + KT YE AE DK RYEKE Y ++ A
Sbjct: 57 WKAMSSEDKTPYETKAEADKKRYEKEKAEYAKKNSA 92
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P + F + K E+WK MS ++K + A+ DK
Sbjct: 19 PKRSLSAYMFFANENRDIVRAENP--GISFGQVGKLLGEKWKAMSSEDKTPYETKAEADK 76
Query: 69 KRYDTEMQSYT 79
KRY+ E Y
Sbjct: 77 KRYEKEKAEYA 87
>gi|118344422|ref|NP_001072036.1| transcription factor protein [Ciona intestinalis]
gi|70570508|dbj|BAE06614.1| transcription factor protein [Ciona intestinalis]
Length = 447
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 25/145 (17%)
Query: 14 TAYAFFVQVCREEHKKKH---PEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKR 70
TAY +FV RE K+ P+ ++ ++ CAE+W+ M+E+EK+ F E++ +D++R
Sbjct: 195 TAYLYFVSKYRETLKEAGEVVPKAKII----TQACAEKWRNMNEEEKEPFLELSRRDRER 250
Query: 71 YDTEMQSYTPPAGEKRGK------------IKQDNPEYGVGDIAKELGKK----WADVDP 114
+ + P R K +++ P G D AKE+ KK W +
Sbjct: 251 WQKDKALEKKPRDPNRPKRPPSAYFLFLADFRKNYP--GKSDPAKEITKKAGEAWNSLSD 308
Query: 115 SVKTKYEQMAEKDKARYEKEMTAYK 139
+ KT Y + A+ +A++E+++ AYK
Sbjct: 309 AEKTPYYRSAQLVRAKWEQDLEAYK 333
>gi|66811728|ref|XP_640043.1| PHD zinc finger-containing protein [Dictyostelium discoideum AX4]
gi|60468063|gb|EAL66073.1| PHD zinc finger-containing protein [Dictyostelium discoideum AX4]
Length = 795
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 4 EKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
E V+PR ++AY ++ + RE+ K+ +P+ V ++ SK +WK ++ ++K ++E
Sbjct: 322 EAIVRPRSNVSAYFHYMNINREDEKRMNPD--VPLSDISKILGAKWKQLTPDDQKEYYEK 379
Query: 64 ADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVG 99
A +DK RY+ EM Y E Q N + +
Sbjct: 380 AREDKIRYENEMVLYNQKCKEVENSFPQINFQLLIN 415
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 54 EKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKI----------KQDNPEYGVGDIAK 103
EK+ R+ E+ KK+ + E+++ P K+ NP+ + DI+K
Sbjct: 300 EKQIARYQELERDRKKKIEEEIEAIVRPRSNVSAYFHYMNINREDEKRMNPDVPLSDISK 359
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRS 142
LG KW + P + +Y + A +DK RYE EM Y +
Sbjct: 360 ILGAKWKQLTPDDQKEYYEKAREDKIRYENEMVLYNQKC 398
>gi|448084218|ref|XP_004195549.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
gi|359376971|emb|CCE85354.1| Piso0_004944 [Millerozyma farinosa CBS 7064]
Length = 92
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 52 MSEKEKKRFHEMADKDKKRYDT---EMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKK 108
MS EKKR A + KK D + +Y A E R ++ +NP G + K LG+K
Sbjct: 1 MSTTEKKR----ASRKKKDPDAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEK 56
Query: 109 WADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
W + KT YE AE DK RYEKE Y ++ A
Sbjct: 57 WKAMTSDDKTPYESKAEADKKRYEKEKAEYAKKNSA 92
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P + F + K E+WK M+ +K + A+ DK
Sbjct: 19 PKRSLSAYMFFANENRDIVRAENP--GISFGQVGKLLGEKWKAMTSDDKTPYESKAEADK 76
Query: 69 KRYDTEMQSY 78
KRY+ E Y
Sbjct: 77 KRYEKEKAEY 86
>gi|332017611|gb|EGI58308.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat
subunit A [Acromyrmex echinatior]
Length = 1249
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 25 EEHKKKHP---EENV---VFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSY 78
EEH K P EE V K+ A + KKR + A +D + Y
Sbjct: 27 EEHAVKSPVSTEEKAPDSVCDNGVKRSATATGNTPNRTKKR--KKAPRDATAPRQPLSGY 84
Query: 79 TPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
++R K++ NP +I K L +W+ + K +Y AE+DK RY +E + Y
Sbjct: 85 FLFLNDRREKVRNQNPSLTFTEITKLLAAEWSKLPIDQKQRYLDAAEQDKERYNREFSDY 144
Query: 139 KNRSVAPV-NEEADEEDDE 156
K + NE+ E +E
Sbjct: 145 KQTEAYRLFNEKQSERQNE 163
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
PR ++ Y F+ RE+ + ++P ++ F E +K A W + +K+R+ + A++DK
Sbjct: 77 PRQPLSGYFLFLNDRREKVRNQNP--SLTFTEITKLLAAEWSKLPIDQKQRYLDAAEQDK 134
Query: 69 KRYDTEMQSY 78
+RY+ E Y
Sbjct: 135 ERYNREFSDY 144
>gi|444322059|ref|XP_004181685.1| hypothetical protein TBLA_0G02260 [Tetrapisispora blattae CBS 6284]
gi|387514730|emb|CCH62166.1| hypothetical protein TBLA_0G02260 [Tetrapisispora blattae CBS 6284]
Length = 497
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R + +K+P+ V E SK + RWK +++ EKK F++
Sbjct: 345 KKQGPKRPSSAYFLFSMSIRSDLLEKYPQAKV--PELSKLASARWKELTDDEKKPFYDEF 402
Query: 65 DKDKKRYD---TEMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y +E + PP E R + ++NP+ + +I K +G++W
Sbjct: 403 RTNWEKYRVLRSEYEKTLPPKRPSGPFIQFTQEIRPIVVKENPDKNLIEITKLIGERWRQ 462
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+DPS K +Y + K +E
Sbjct: 463 LDPSKKAEYTEEYRKRLKEWE 483
>gi|384491850|gb|EIE83046.1| hypothetical protein RO3G_07751 [Rhizopus delemar RA 99-880]
Length = 101
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF Q R K+++P+ F E K ERWK +SE+EKK + + A+ DK
Sbjct: 33 PKRGLSAYMFFSQDQRPTVKEENPK--ASFGEIGKILGERWKALSEEEKKPYLKKAEDDK 90
Query: 69 KRYDTE 74
KRY+ E
Sbjct: 91 KRYEDE 96
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + ++R +K++NP+ G+I K LG++W + K Y + AE DK RYE E
Sbjct: 37 LSAYMFFSQDQRPTVKEENPKASFGEIGKILGERWKALSEEEKKPYLKKAEDDKKRYEDE 96
Query: 135 MTA 137
A
Sbjct: 97 KAA 99
>gi|255720981|ref|XP_002545425.1| hypothetical protein CTRG_00206 [Candida tropicalis MYA-3404]
gi|240135914|gb|EER35467.1| hypothetical protein CTRG_00206 [Candida tropicalis MYA-3404]
Length = 66
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%)
Query: 82 AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
A E R ++ +NP G + K LG+KW + P KT YE AE DK RYEKE Y
Sbjct: 4 ANENRDIVRAENPGISFGQVGKLLGEKWKALTPEDKTPYENKAEADKKRYEKEKAEY 60
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 18 FFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQS 77
FF R+ + ++P + F + K E+WK ++ ++K + A+ DKKRY+ E
Sbjct: 2 FFANENRDIVRAENP--GISFGQVGKLLGEKWKALTPEDKTPYENKAEADKKRYEKEKAE 59
Query: 78 YT 79
Y
Sbjct: 60 YA 61
>gi|15228471|ref|NP_189515.1| FACT complex subunit SSRP1 [Arabidopsis thaliana]
gi|26454672|sp|Q05153.2|SSRP1_ARATH RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=High mobility group B protein 8; AltName:
Full=Nucleosome/chromatin assembly factor group D 08;
Short=Nucleosome/chromatin assembly factor group D 8;
AltName: Full=Recombination signal sequence recognition
protein 1
gi|11994780|dbj|BAB03170.1| structure-specific recognition protein 1 (HMG1 DNA-binding protein)
[Arabidopsis thaliana]
gi|27311803|gb|AAO00867.1| recombination signal sequence recognition protein, putative
[Arabidopsis thaliana]
gi|332643963|gb|AEE77484.1| FACT complex subunit SSRP1 [Arabidopsis thaliana]
Length = 646
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+ + FF Q+ R+ KK+HP + F E K ++W+ MS +K+ + A DK+RY
Sbjct: 566 MSGFMFFSQMERDNIKKEHP--GIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYK 623
Query: 73 TEMQSYTPP 81
E+ Y P
Sbjct: 624 DEISDYKNP 632
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+R IK+++P G++ K LG KW + K YE A+ DK RY+ E++ YKN
Sbjct: 576 ERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQ-- 633
Query: 145 PVNEEADEEDD 155
P+N ++ + D
Sbjct: 634 PMNVDSGNDSD 644
>gi|413947661|gb|AFW80310.1| structure-specific recognition protein 1 [Zea mays]
Length = 651
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+RG +K NP+ +IAK+LG+ W + K Y Q A+ DK RYEKE Y R A
Sbjct: 583 ERGNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVY--RGEA 640
Query: 145 PVNEEADEEDD 155
V+ ++ E D
Sbjct: 641 TVDVDSGNESD 651
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
MT + +F R K +P+ + E +KK E W+ MS +EK+ + + A DKKRY+
Sbjct: 573 MTPFMYFSMAERGNMKSSNPD--LPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYE 630
Query: 73 TEMQSY 78
E Y
Sbjct: 631 KESAVY 636
>gi|363543425|ref|NP_001241722.1| structure-specific recognition protein 1 [Zea mays]
gi|195604724|gb|ACG24192.1| structure-specific recognition protein 1 [Zea mays]
Length = 651
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+RG +K NP+ +IAK+LG+ W + K Y Q A+ DK RYEKE Y R A
Sbjct: 583 ERGNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVY--RGEA 640
Query: 145 PVNEEADEEDD 155
V+ ++ E D
Sbjct: 641 TVDVDSGNESD 651
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
MT + +F R K +P+ + E +KK E W+ MS +EK+ + + A DKKRY+
Sbjct: 573 MTPFMYFSMAERGNMKSSNPD--LPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYE 630
Query: 73 TEMQSY 78
E Y
Sbjct: 631 KESAVY 636
>gi|260824573|ref|XP_002607242.1| hypothetical protein BRAFLDRAFT_130806 [Branchiostoma floridae]
gi|229292588|gb|EEN63252.1| hypothetical protein BRAFLDRAFT_130806 [Branchiostoma floridae]
Length = 334
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 3 KEKDVK-PRGRMTAYAFFVQVCR----EEHKKKHPEENVVFAEFSKKCAERWKTMSEKEK 57
KEKD P+ A+ F Q R E + K+H EE + E +K+ A+ W ++S ++K
Sbjct: 182 KEKDPNAPKKPANAFFMFCQQRRSQVQESYYKEHKEE-IGHHELTKRLAKSWNSLSSEDK 240
Query: 58 KRFHEMADKDKKRYDTEMQSYT 79
KR+++M +KDK+RY+ EM+ YT
Sbjct: 241 KRYYDMYEKDKERYEREMREYT 262
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 95 EYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
E G ++ K L K W + K +Y M EKDK RYE+EM Y +
Sbjct: 218 EIGHHELTKRLAKSWNSLSSEDKKRYYDMYEKDKERYEREMREYTS 263
>gi|729737|sp|P40620.1|HMGL_VICFA RecName: Full=HMG1/2-like protein
Length = 149
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ +A+ F+ RE++KK HP N A K C E WK++SE+EK + + A K
Sbjct: 44 KPKRPPSAFFVFMADFREQYKKDHPN-NKSVAAVGKACGEEWKSLSEEEKAPYVDRALKK 102
Query: 68 KKRYDTEMQSYT 79
K+ Y+ +Q+Y
Sbjct: 103 KEEYEITLQAYN 114
>gi|403354143|gb|EJY76622.1| High mobility group protein 1.2 [Oxytricha trifallax]
Length = 1086
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++ Y FF Q R+E KK HP+ N ++ K+ + W+ MS +K+ FH+ + D+
Sbjct: 354 PKKPLSPYIFFSQEKRKELKKDHPDWNS--SQIMKQVSLLWQKMSADQKRDFHDQSKIDR 411
Query: 69 KRYDTEMQSYTPPAGEKRGK 88
+R++ E Q Y G + G+
Sbjct: 412 ERFEKERQEYVNNKGNEGGE 431
Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
EKR ++K+D+P++ I K++ W + K + ++ D+ R+EKE Y N
Sbjct: 367 EKRKELKKDHPDWNSSQIMKQVSLLWQKMSADQKRDFHDQSKIDRERFEKERQEYVN 423
>gi|451847653|gb|EMD60960.1| hypothetical protein COCSADRAFT_98214 [Cochliobolus sativus
ND90Pr]
Length = 106
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE+ ++ +P + F E K E+WK ++EK+++ + A DK
Sbjct: 28 PKRGLSAYMFFANEQREKVREDNP--GIKFGEVGKLLGEKWKALNEKQRQPYEAKAALDK 85
Query: 69 KRYDTEMQSYT 79
KRY+ E +YT
Sbjct: 86 KRYEQEKAAYT 96
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R K+++DNP G++ K LG+KW ++ + YE A DK RYE+E
Sbjct: 32 LSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNEKQRQPYEAKAALDKKRYEQE 91
Query: 135 MTAY 138
AY
Sbjct: 92 KAAY 95
>gi|367008704|ref|XP_003678853.1| hypothetical protein TDEL_0A03100 [Torulaspora delbrueckii]
gi|359746510|emb|CCE89642.1| hypothetical protein TDEL_0A03100 [Torulaspora delbrueckii]
Length = 438
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +AY F R + +++PE V E SK + +WK +S+ +KK ++E +
Sbjct: 290 PKRPSSAYFLFSMSIRNDLLQQYPEAKV--PELSKLASAKWKELSDDDKKPYYEEFRTNW 347
Query: 69 KRYDT---EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPS 115
++Y E + PP E R + ++NP+ + +I K +G+KW ++DP
Sbjct: 348 EKYRVLRDEYEKTLPPKRPSGPFIQFTQEIRSTVVKENPDKNLIEITKMIGEKWRNLDPL 407
Query: 116 VKTKY 120
K +Y
Sbjct: 408 KKAEY 412
>gi|302411796|ref|XP_003003731.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|261357636|gb|EEY20064.1| nucleosome binding protein [Verticillium albo-atrum VaMs.102]
gi|346978438|gb|EGY21890.1| nucleosome binding protein [Verticillium dahliae VdLs.17]
Length = 102
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 25 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKLLGERWKALNEKQRGPYEAKAVADK 82
Query: 69 KRYDTEMQSYTPPA 82
KRY+ E +Y A
Sbjct: 83 KRYEDEKAAYNAEA 96
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 29 LSAYMFFANEQRENVREENPGISFGQVGKLLGERWKALNEKQRGPYEAKAVADKKRYEDE 88
Query: 135 MTAYKNRSVAPVNEEADEEDDE 156
AY A+ EDDE
Sbjct: 89 KAAY----------NAEAEDDE 100
>gi|224030253|gb|ACN34202.1| unknown [Zea mays]
gi|413947660|gb|AFW80309.1| FACT complex subunit SSRP1 [Zea mays]
Length = 639
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+RG +K NP+ +IAK+LG+ W + K Y Q A+ DK RYEKE Y R A
Sbjct: 571 ERGNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVY--RGEA 628
Query: 145 PVNEEADEEDD 155
V+ ++ E D
Sbjct: 629 TVDVDSGNESD 639
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
MT + +F R K +P+ + E +KK E W+ MS +EK+ + + A DKKRY+
Sbjct: 561 MTPFMYFSMAERGNMKSSNPD--LPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYE 618
Query: 73 TEMQSY 78
E Y
Sbjct: 619 KESAVY 624
>gi|440298682|gb|ELP91313.1| hypothetical protein EIN_153200 [Entamoeba invadens IP1]
Length = 185
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ TAY ++ R E K+K P+ V E +KK E WK M E++KK + + ADK
Sbjct: 99 KPKKPQTAYMLYLNEHRAEIKEKFPDMKVT--EVAKKAGENWKAMGEEDKKPYQDKADKA 156
Query: 68 KKRYDTEMQSY 78
K+ + TEM+ Y
Sbjct: 157 KETWKTEMKKY 167
>gi|297815172|ref|XP_002875469.1| high mobility group, structure-specific recognition protein 1
[Arabidopsis lyrata subsp. lyrata]
gi|297321307|gb|EFH51728.1| high mobility group, structure-specific recognition protein 1
[Arabidopsis lyrata subsp. lyrata]
Length = 645
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
M+ + +F Q+ R+ KK+HP + F E K ++W+ MS +EK+ + A DK+RY
Sbjct: 565 MSGFMYFSQMERDNIKKEHP--GIAFGEVGKVLGDKWRQMSAEEKEPYEAKAQVDKQRYK 622
Query: 73 TEMQSYTPP 81
E+ Y P
Sbjct: 623 DEISDYKNP 631
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R IK+++P G++ K LG KW + K YE A+ DK RY+ E++ YKN P
Sbjct: 576 RDNIKKEHPGIAFGEVGKVLGDKWRQMSAEEKEPYEAKAQVDKQRYKDEISDYKNPQ--P 633
Query: 146 VNEEADEEDD 155
VN ++ E D
Sbjct: 634 VNVDSGNESD 643
>gi|168062434|ref|XP_001783185.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665327|gb|EDQ52016.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 1 MPKEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
MPK+ PR T Y FF R K HPE++ E S+ + W ++E+EK +
Sbjct: 233 MPKKDPNAPRPHRTGYNFFFAEQRARLKALHPEKD---KELSRMIGDAWNNLTEEEKTLY 289
Query: 61 HEMADKDKKRYDTEMQSY 78
+ +DK+RY TE++ Y
Sbjct: 290 QDRGVQDKERYKTELREY 307
>gi|361127235|gb|EHK99210.1| putative Non-histone chromosomal protein 6 [Glarea lozoyensis
74030]
Length = 100
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K ERWK +S+ ++K + AD DK
Sbjct: 23 PKRGLSAYMFFANEQRENVREENP--GISFGQVGKVLGERWKALSDTQRKPYAAKADADK 80
Query: 69 KRYDTEMQSYTPPAGE 84
RY+ E +Y A E
Sbjct: 81 IRYEEEKANYNADAEE 96
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + + Y A+ DK RYE+E
Sbjct: 27 LSAYMFFANEQRENVREENPGISFGQVGKVLGERWKALSDTQRKPYAAKADADKIRYEEE 86
Query: 135 MTAY 138
Y
Sbjct: 87 KANY 90
>gi|452988900|gb|EME88655.1| hypothetical protein MYCFIDRAFT_57980 [Pseudocercospora fijiensis
CIRAD86]
Length = 108
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R++ + ++P + F E K E+WK + EK+K + A DK
Sbjct: 30 PKRGLSAYMFFANEQRDKVRDENP--GIKFGEVGKMLGEKWKALGEKQKAPYEAKAAADK 87
Query: 69 KRYDTEMQSYT 79
KRY+ E +YT
Sbjct: 88 KRYEEEKAAYT 98
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R K++ +NP G++ K LG+KW + K YE A DK RYE+E
Sbjct: 34 LSAYMFFANEQRDKVRDENPGIKFGEVGKMLGEKWKALGEKQKAPYEAKAAADKKRYEEE 93
Query: 135 MTAY 138
AY
Sbjct: 94 KAAY 97
>gi|254578116|ref|XP_002495044.1| ZYRO0B02068p [Zygosaccharomyces rouxii]
gi|238937934|emb|CAR26111.1| ZYRO0B02068p [Zygosaccharomyces rouxii]
Length = 477
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E +++PE V E SK + RWK ++E +KK F+E
Sbjct: 326 KKQGPKRPSSAYFLFSMSIRNELLQQYPEAKV--PELSKLASARWKELNEDQKKPFYEEF 383
Query: 65 DKDKKRYDTEMQSYTP------PAG-------EKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ +Y E Y P+G E R + ++NPE + +I K +G++W
Sbjct: 384 RTNWDKYRVERDQYEKTLPPKRPSGPFIQFTQEIRPIVVKENPEKNLIEITKIIGERWRS 443
Query: 112 VDPSVKTKYEQMAEKDKARYE 132
+D K +Y + +K +E
Sbjct: 444 LDVGKKNEYTETYKKRLKEWE 464
>gi|162462425|ref|NP_001105124.1| FACT complex subunit SSRP1 [Zea mays]
gi|75263808|sp|Q9LEF5.1|SSRP1_MAIZE RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
chromatin transcription complex subunit SSRP1; AltName:
Full=Recombination signal sequence recognition protein
1; AltName: Full=Zm-SSRP1
gi|8920409|emb|CAB96421.1| SSRP1 protein [Zea mays]
Length = 639
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 85 KRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
+RG +K NP+ +IAK+LG+ W + K Y Q A+ DK RYEKE Y R A
Sbjct: 571 ERGNMKSSNPDLPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYEKESAVY--RGEA 628
Query: 145 PVNEEADEEDD 155
V+ ++ E D
Sbjct: 629 TVDVDSGNESD 639
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
MT + +F R K +P+ + E +KK E W+ MS +EK+ + + A DKKRY+
Sbjct: 561 MTPFMYFSMAERGNMKSSNPD--LPTTEIAKKLGEMWQKMSGEEKQPYIQQAQVDKKRYE 618
Query: 73 TEMQSY 78
E Y
Sbjct: 619 KESAVY 624
>gi|398406589|ref|XP_003854760.1| HMGB family protein [Zymoseptoria tritici IPO323]
gi|339474644|gb|EGP89736.1| HMGB family protein [Zymoseptoria tritici IPO323]
Length = 111
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G++ K LG++W ++ KT YE A DK RYE+E
Sbjct: 33 LSAYMFFANEQRDNVREENPGIKFGEVGKLLGERWKGLNEKQKTPYEAKAAADKKRYEEE 92
Query: 135 MTAYKN 140
AY N
Sbjct: 93 KKAYLN 98
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P + F E K ERWK ++EK+K + A DK
Sbjct: 29 PKRGLSAYMFFANEQRDNVREENP--GIKFGEVGKLLGERWKGLNEKQKTPYEAKAAADK 86
Query: 69 KRYDTEMQSYT 79
KRY+ E ++Y
Sbjct: 87 KRYEEEKKAYL 97
>gi|212526742|ref|XP_002143528.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
marneffei ATCC 18224]
gi|212526744|ref|XP_002143529.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
marneffei ATCC 18224]
gi|210072926|gb|EEA27013.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
marneffei ATCC 18224]
gi|210072927|gb|EEA27014.1| nucleosome binding protein (Nhp6a), putative [Talaromyces
marneffei ATCC 18224]
Length = 103
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE + ++P + F +K E WK +S+ E+K + + A DK
Sbjct: 25 PKRGLSAYMFFANENRERVRDENP--GIAFGALGRKLGELWKGLSDSERKPYEDKAAADK 82
Query: 69 KRYDTEMQSY 78
KRY+ + +Y
Sbjct: 83 KRYEDQKATY 92
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R +++ +NP G + ++LG+ W + S + YE A DK RYE +
Sbjct: 29 LSAYMFFANENRERVRDENPGIAFGALGRKLGELWKGLSDSERKPYEDKAAADKKRYEDQ 88
Query: 135 MTAY 138
Y
Sbjct: 89 KATY 92
>gi|156401428|ref|XP_001639293.1| predicted protein [Nematostella vectensis]
gi|156226420|gb|EDO47230.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + +HPE + F E +K W MS+ +K+R+ + A++DK
Sbjct: 21 PKAPLTGYVQFLNEQREKVRSEHPE--LPFPEVTKILGAEWSKMSQDDKQRYLDDAERDK 78
Query: 69 KRYDTEMQSY 78
+RY E+++Y
Sbjct: 79 ERYIIELENY 88
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R K++ ++PE ++ K LG +W+ + K +Y AE+DK RY E
Sbjct: 25 LTGYVQFLNEQREKVRSEHPELPFPEVTKILGAEWSKMSQDDKQRYLDDAERDKERYIIE 84
Query: 135 MTAYK 139
+ Y+
Sbjct: 85 LENYQ 89
>gi|400599237|gb|EJP66941.1| HMG box protein [Beauveria bassiana ARSEF 2860]
Length = 96
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P V F + K ERWK +S+K++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRENVREENP--GVSFGQVGKILGERWKALSDKQRTPYEAKAAADK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E +Y
Sbjct: 84 KRYEDEKAAYN 94
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 56 EKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPS 115
EKKR A KD + +Y A E+R ++++NP G + K LG++W +
Sbjct: 15 EKKR----AKKDPNAPKRGLSAYMFFANEQRENVREENPGVSFGQVGKILGERWKALSDK 70
Query: 116 VKTKYEQMAEKDKARYEKEMTAY 138
+T YE A DK RYE E AY
Sbjct: 71 QRTPYEAKAAADKKRYEDEKAAY 93
>gi|367012149|ref|XP_003680575.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
gi|359748234|emb|CCE91364.1| hypothetical protein TDEL_0C04750 [Torulaspora delbrueckii]
Length = 93
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + + LG++W + P KT YE AE DK RYE E
Sbjct: 25 LSAYMFFANENRDIVRSENPDVTFGQVGRLLGERWKALTPDEKTPYESKAEADKKRYESE 84
Query: 135 MTAY 138
Y
Sbjct: 85 KELY 88
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P+ V F + + ERWK ++ EK + A+ DK
Sbjct: 21 PKRALSAYMFFANENRDIVRSENPD--VTFGQVGRLLGERWKALTPDEKTPYESKAEADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
>gi|213407940|ref|XP_002174741.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212002788|gb|EEB08448.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 134
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R KIK++NPE G I LGKKW + K YE+ A KDK RYE+E ++ P
Sbjct: 31 REKIKEENPEATFGQIGSLLGKKWKTLTAVEKEPYEEKARKDKERYERECMKGPAKTGEP 90
Query: 146 VNEEAD 151
V +E +
Sbjct: 91 VKKETN 96
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+A+ FF RE+ K+++PE F + ++WKT++ EK+ + E A KDK
Sbjct: 16 PKRNMSAFMFFSMSNREKIKEENPE--ATFGQIGSLLGKKWKTLTAVEKEPYEEKARKDK 73
Query: 69 KRYDTE 74
+RY+ E
Sbjct: 74 ERYERE 79
>gi|50421411|ref|XP_459256.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
gi|74631679|sp|Q6BRB4.1|NHP6_DEBHA RecName: Full=Non-histone chromosomal protein 6
gi|49654923|emb|CAG87430.1| DEHA2D17710p [Debaryomyces hansenii CBS767]
Length = 92
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP G + K LG+KW + P K YE A+ DK RYEKE
Sbjct: 23 LSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTPEDKIPYENKADTDKKRYEKE 82
Query: 135 MTAYKNRSVA 144
Y ++ A
Sbjct: 83 KAEYAKKNAA 92
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P + F + K E+WK ++ ++K + AD DK
Sbjct: 19 PKRSLSAYMFFANENRDIVRAENP--GISFGQVGKLLGEKWKALTPEDKIPYENKADTDK 76
Query: 69 KRYDTEMQSYT 79
KRY+ E Y
Sbjct: 77 KRYEKEKAEYA 87
>gi|254580675|ref|XP_002496323.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
gi|238939214|emb|CAR27390.1| ZYRO0C15752p [Zygosaccharomyces rouxii]
Length = 98
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + + LG+KW + P KT YE AE DK RYE E
Sbjct: 25 LSAYMFFANENRDIVRAENPDVTFGQVGRILGEKWKALTPDEKTPYEAKAEADKKRYESE 84
Query: 135 MTAY 138
Y
Sbjct: 85 KELY 88
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P+ V F + + E+WK ++ EK + A+ DK
Sbjct: 21 PKRALSAYMFFANENRDIVRAENPD--VTFGQVGRILGEKWKALTPDEKTPYEAKAEADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
>gi|428671805|gb|EKX72720.1| high mobility group protein, putative [Babesia equi]
Length = 94
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYG--VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
+ SY A EKR +I +NPE V + + +G W +D K +E++AE+DKARYE
Sbjct: 27 LSSYMFFAKEKRAEIIAENPELAKDVASVGRLIGAAWNALDEKEKAPFEKLAEEDKARYE 86
Query: 133 KEMTAY 138
KE Y
Sbjct: 87 KEKAEY 92
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +++Y FF + R E ++PE A + W + EKEK F ++A++DK
Sbjct: 23 PKRALSSYMFFAKEKRAEIIAENPELAKDVASVGRLIGAAWNALDEKEKAPFEKLAEEDK 82
Query: 69 KRYDTEMQSY 78
RY+ E Y
Sbjct: 83 ARYEKEKAEY 92
>gi|156843619|ref|XP_001644876.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156115528|gb|EDO17018.1| hypothetical protein Kpol_1065p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 93
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ K ++P+ V F + + E+WK M++++K+ F A+ DK
Sbjct: 21 PKRALSAYMFFANETRDIVKAENPD--VSFGQVGRILGEKWKAMTDEDKQPFDAKAEADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R +K +NP+ G + + LG+KW + K ++ AE DK RYE E
Sbjct: 25 LSAYMFFANETRDIVKAENPDVSFGQVGRILGEKWKAMTDEDKQPFDAKAEADKKRYESE 84
Query: 135 MTAY 138
Y
Sbjct: 85 KELY 88
>gi|401839076|gb|EJT42436.1| NHP6A-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 93
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P+ + F + KK E+WK ++ +EK+ + A DK
Sbjct: 21 PKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEAKAQADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + K+LG+KW + P K YE A+ DK RYE E
Sbjct: 25 LSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESE 84
Query: 135 MTAYKNRSVA 144
Y N ++A
Sbjct: 85 KELY-NATLA 93
>gi|58268918|ref|XP_571615.1| nonhistone protein 6 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112618|ref|XP_774852.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818300|sp|P0CO25.1|NHP6_CRYNB RecName: Full=Non-histone chromosomal protein 6
gi|338818301|sp|P0CO24.1|NHP6_CRYNJ RecName: Full=Non-histone chromosomal protein 6
gi|50257500|gb|EAL20205.1| hypothetical protein CNBF0170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227850|gb|AAW44308.1| nonhistone protein 6, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 116
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ ++AY FFVQ RE K ++PE F + K +W+ M+E EKK + A D
Sbjct: 27 KPKRALSAYMFFVQDYRERIKTENPE--ATFGDVGKLLGIKWREMNENEKKPYEAKAKAD 84
Query: 68 KKRYDTEMQSY 78
K+R D E Y
Sbjct: 85 KERADRENADY 95
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
R +IK +NPE GD+ K LG KW +++ + K YE A+ DK R ++E Y
Sbjct: 43 RERIKTENPEATFGDVGKLLGIKWREMNENEKKPYEAKAKADKERADRENADY 95
>gi|261194046|ref|XP_002623428.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588442|gb|EEQ71085.1| nucleosome binding protein [Ajellomyces dermatitidis SLH14081]
gi|327354542|gb|EGE83399.1| nonhistone chromosomal protein 6A [Ajellomyces dermatitidis ATCC
18188]
Length = 101
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 24 PKRGLSAYMFFANEQRDNVREENP--GISFGQVGKVLGERWKALNEKQRAPYEAKAAADK 81
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 82 KRYEDEKASYN 92
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 28 LSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYEAKAAADKKRYEDE 87
Query: 135 MTAY 138
+Y
Sbjct: 88 KASY 91
>gi|349604600|gb|AEQ00107.1| High mobility group protein B3-like protein, partial [Equus
caballus]
Length = 118
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 80 PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
PP+G E R KIK NP +GD+AK+LG+ W ++ S K Y A K K +YEK
Sbjct: 13 PPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDSEKQPYNNKAAKLKEKYEK 72
Query: 134 EMTAYKNRS 142
++ YK++
Sbjct: 73 DVADYKSKG 81
>gi|151942838|gb|EDN61184.1| nonhistone chromosomal protein [Saccharomyces cerevisiae YJM789]
gi|190407991|gb|EDV11256.1| 11 kDa nonhistone chromosomal protein [Saccharomyces cerevisiae
RM11-1a]
gi|256268928|gb|EEU04275.1| Nhp6ap [Saccharomyces cerevisiae JAY291]
gi|259150205|emb|CAY87008.1| Nhp6ap [Saccharomyces cerevisiae EC1118]
gi|349581863|dbj|GAA27020.1| K7_Nhp6ap [Saccharomyces cerevisiae Kyokai no. 7]
Length = 93
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P+ + F + KK E+WK ++ +EK+ + A DK
Sbjct: 21 PKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEAKAQADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + K+LG+KW + P K YE A+ DK RYE E
Sbjct: 25 LSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESE 84
Query: 135 MTAYKNRSVA 144
Y N ++A
Sbjct: 85 KELY-NATLA 93
>gi|444323521|ref|XP_004182401.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS
6284]
gi|387515448|emb|CCH62882.1| hypothetical protein TBLA_0I02240 [Tetrapisispora blattae CBS
6284]
Length = 94
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P +V F + K ERWK +S +EK + A+ DK
Sbjct: 21 PKRALSAYMFFANETRDIVRSENP--DVTFGQVGKILGERWKALSAEEKVPYETKAEADK 78
Query: 69 KRYDTEMQSY 78
KRY++E + Y
Sbjct: 79 KRYESEKELY 88
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + K LG++W + K YE AE DK RYE E
Sbjct: 25 LSAYMFFANETRDIVRSENPDVTFGQVGKILGERWKALSAEEKVPYETKAEADKKRYESE 84
Query: 135 MTAY 138
Y
Sbjct: 85 KELY 88
>gi|351712376|gb|EHB15295.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 139
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 24/84 (28%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKR------------------------G 87
MS KEK +F MA DK RY+ EM++Y PP GE +
Sbjct: 1 MSAKEKGKFEGMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFLLFCSEYHP 60
Query: 88 KIKQDNPEYGVGDIAKELGKKWAD 111
KIK +P GD+AK+LG+ W +
Sbjct: 61 KIKGGHPRLSNGDVAKKLGEMWNN 84
>gi|405121060|gb|AFR95829.1| nonhistone protein 6 [Cryptococcus neoformans var. grubii H99]
Length = 116
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ ++AY FFVQ RE K ++PE F + K +W+ M+E EKK + A D
Sbjct: 27 KPKRALSAYMFFVQDYRERIKAENPE--ATFGDVGKLLGIKWREMNENEKKPYEAKAKAD 84
Query: 68 KKRYDTEMQSY 78
K+R D E Y
Sbjct: 85 KERADRENADY 95
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
R +IK +NPE GD+ K LG KW +++ + K YE A+ DK R ++E Y
Sbjct: 43 RERIKAENPEATFGDVGKLLGIKWREMNENEKKPYEAKAKADKERADRENADY 95
>gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae
Length = 93
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P+ + F + KK E+WK ++ +EK+ + A DK
Sbjct: 21 PKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEAKAQADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + K+LG+KW + P K YE A+ DK RYE E
Sbjct: 25 LSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESE 84
Query: 135 MTAYKNRSVA 144
Y N ++A
Sbjct: 85 KELY-NATLA 93
>gi|6325309|ref|NP_015377.1| Nhp6ap [Saccharomyces cerevisiae S288c]
gi|128182|sp|P11632.1|NHP6A_YEAST RecName: Full=Non-histone chromosomal protein 6A
gi|24987379|pdb|1J5N|A Chain A, Solution Structure Of The Non-Sequence-Specific Hmgb
Protein Nhp6a In Complex With Sry Dna
gi|24987655|pdb|1LWM|A Chain A, Solution Structure Of The Sequence-Non-Specific Hmgb
Protein Nhp6a
gi|4034|emb|CAA33377.1| unnamed protein product [Saccharomyces cerevisiae]
gi|171883|gb|AAA34754.1| high mobility group non-histone protein [Saccharomyces
cerevisiae]
gi|805034|emb|CAA89171.1| Nhp6ap [Saccharomyces cerevisiae]
gi|1314122|emb|CAA94998.1| Nhp6ap [Saccharomyces cerevisiae]
gi|51013911|gb|AAT93249.1| YPR052C [Saccharomyces cerevisiae]
gi|285815583|tpg|DAA11475.1| TPA: Nhp6ap [Saccharomyces cerevisiae S288c]
gi|392296063|gb|EIW07166.1| Nhp6ap [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 93
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P+ + F + KK E+WK ++ +EK+ + A DK
Sbjct: 21 PKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEAKAQADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + K+LG+KW + P K YE A+ DK RYE E
Sbjct: 25 LSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESE 84
Query: 135 MTAYKNRSVA 144
Y N ++A
Sbjct: 85 KELY-NATLA 93
>gi|389626627|ref|XP_003710967.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|78192124|gb|ABB30152.1| nonhistone protein 6 [Magnaporthe grisea]
gi|291195731|gb|ADD84582.1| nonhistone chromosomal protein 6B [Magnaporthe oryzae]
gi|351650496|gb|EHA58355.1| non-histone chromosomal protein 6 [Magnaporthe oryzae 70-15]
gi|440463464|gb|ELQ33044.1| nucleosome binding protein [Magnaporthe oryzae Y34]
gi|440481294|gb|ELQ61893.1| nucleosome binding protein [Magnaporthe oryzae P131]
Length = 101
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+ P+ ++AY FF R+ ++++P V F + K ERWK +S+K++ + A
Sbjct: 22 MAPKRGLSAYMFFANEQRDNVREENP--GVTFGQVGKILGERWKALSDKQRAPYDAKAAA 79
Query: 67 DKKRYDTEMQSY 78
DKKRY+ E +Y
Sbjct: 80 DKKRYEDEKAAY 91
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + Y+ A DK RYE E
Sbjct: 28 LSAYMFFANEQRDNVREENPGVTFGQVGKILGERWKALSDKQRAPYDAKAAADKKRYEDE 87
Query: 135 MTAYK 139
AY+
Sbjct: 88 KAAYQ 92
>gi|255637700|gb|ACU19173.1| unknown [Glycine max]
Length = 478
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
++PR M+AY F + + EN F E K +E WK M+E++K+ + EMA K
Sbjct: 265 LRPRHPMSAYFLFTN----DRRAALAAENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKK 320
Query: 67 DKKRYDTEMQSY 78
+K++Y EM++Y
Sbjct: 321 NKEQYALEMEAY 332
>gi|356506416|ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
Length = 614
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 KEKDVK-PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFH 61
KEKD P+ M+ + FF ++ RE KK +P + F + + E+WK +S +EK+ +
Sbjct: 523 KEKDPNAPKRAMSGFMFFSKLERENLKKTNP--GISFTDVGRVLGEKWKKLSAEEKEPYE 580
Query: 62 EMADKDKKRYDTEMQSYTPP 81
A +DKKRY E+ Y P
Sbjct: 581 AKAREDKKRYMDEISGYKNP 600
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R +K+ NP D+ + LG+KW + K YE A +DK RY E++ YKN P
Sbjct: 545 RENLKKTNPGISFTDVGRVLGEKWKKLSAEEKEPYEAKAREDKKRYMDEISGYKNPQ--P 602
Query: 146 VNEEADEEDD 155
+N ++ E D
Sbjct: 603 MNIDSGNESD 612
>gi|328874899|gb|EGG23264.1| PHD zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 758
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
KEK KP+ +TA+ ++ RE K+ PE + A+ SK ++W+ +++ EKK +H
Sbjct: 355 KEKITKPKTNVTAFFHYLNDNRETEKRAQPE--LSLADISKVLGQKWRVLTDDEKKPYHT 412
Query: 63 MADKDKKRYDTEMQSY 78
A D+ R+D ++ Y
Sbjct: 413 KAADDRVRFDADIIEY 428
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 90 KQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
K+ PE + DI+K LG+KW + K Y A D+ R++ ++ YK
Sbjct: 380 KRAQPELSLADISKVLGQKWRVLTDDEKKPYHTKAADDRVRFDADIIEYK 429
>gi|225681708|gb|EEH19992.1| nucleosome binding protein [Paracoccidioides brasiliensis Pb03]
Length = 103
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRDNVREENP--GISFGQVGKVLGERWKALNEKQRAPYEAKAAADK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 84 KRYEDEKASYN 94
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 50 KTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKW 109
K S K K R E KD + +Y A E+R ++++NP G + K LG++W
Sbjct: 5 KVSSRKSKSRGVEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERW 64
Query: 110 ADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
++ + YE A DK RYE E +Y
Sbjct: 65 KALNEKQRAPYEAKAAADKKRYEDEKASY 93
>gi|397641580|gb|EJK74733.1| hypothetical protein THAOC_03573 [Thalassiosira oceanica]
Length = 163
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 6 DVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA- 64
D P + +AY FF R + K+ P N + +K +E+W+T+S +EK ++ +A
Sbjct: 27 DTTPGAKRSAYTFFTLEMRPKLAKQFP--NTSISMMAKLLSEKWRTISPEEKAKYASLAA 84
Query: 65 --DKDKKRYDTEMQ--------SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKW 109
DKD K + ++ ++ EK K+K P +G +AK +G+ W
Sbjct: 85 DQDKDDKAVEGPVEVTVKRKANAFNLFTAEKIPKLKATYPNANLGHLAKLIGELW 139
>gi|158297853|ref|XP_318023.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|158297857|ref|XP_001689081.1| AGAP004789-PA [Anopheles gambiae str. PEST]
gi|157014526|gb|EAA13138.4| AGAP004791-PA [Anopheles gambiae str. PEST]
gi|157014528|gb|EDO63498.1| AGAP004789-PA [Anopheles gambiae str. PEST]
Length = 324
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y ++ RE ++KHP N+ E +K AE W +SE+ KK + E A+ DK
Sbjct: 74 PKHPLTGYVRYMNEHREGVRQKHP--NLTPIEVTKIMAEEWSKLSEERKKPYLEAAEVDK 131
Query: 69 KRYDTEMQSY 78
+RY+ E+ Y
Sbjct: 132 ERYNKEISEY 141
>gi|346324407|gb|EGX94004.1| nucleosome binding protein [Cordyceps militaris CM01]
Length = 96
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P V F + K ERWK +SEK++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRDNVREENP--GVSFGQVGKILGERWKALSEKQRVPYEAKAAADK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E +Y
Sbjct: 84 KRYEDEKAAYN 94
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 44 KCAERWKTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAK 103
K A K + EKKR A KD + +Y A E+R ++++NP G + K
Sbjct: 3 KAAAAPKRGARVEKKR----AKKDPNAPKRGLSAYMFFANEQRDNVREENPGVSFGQVGK 58
Query: 104 ELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
LG++W + + YE A DK RYE E AY
Sbjct: 59 ILGERWKALSEKQRVPYEAKAAADKKRYEDEKAAY 93
>gi|171848939|pdb|2YQI|A Chain A, Solution Structure Of The Second Hmg-Box Domain From High
Mobility Group Protein B3
Length = 81
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 80 PPAG------EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEK 133
PP+G E R KIK NP +GD+AK+LG+ W +++ S K Y A K K +YEK
Sbjct: 13 PPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEK 72
Query: 134 EMTAYKNRS 142
++ YK++
Sbjct: 73 DVADYKSKG 81
>gi|50291849|ref|XP_448357.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527669|emb|CAG61318.1| unnamed protein product [Candida glabrata]
Length = 201
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 15 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT- 73
A AF + +E + E S E+W+ +SE EK+ + + + + Y T
Sbjct: 59 AAAFILYTVQERANATAENPGLSTKEISAVLGEKWRQLSEYEKEPYFQKTQQALEEYKTK 118
Query: 74 --EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYE 121
E ++ PP + E R +IK NP GD+A +G++W + K KY
Sbjct: 119 KQEFEAMLPPKKPLSPFLLFSNEVREEIKSQNPSLSFGDLASLIGRRWKSLGEYEKKKYY 178
Query: 122 QMAEKDKARYEKEM 135
++K+ +E+E+
Sbjct: 179 DRYAENKSSWEQEV 192
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 4 EKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
E + P+ ++ + F REE K ++P ++ F + + RWK++ E EKK++++
Sbjct: 123 EAMLPPKKPLSPFLLFSNEVREEIKSQNP--SLSFGDLASLIGRRWKSLGEYEKKKYYDR 180
Query: 64 ADKDKKRYDTEMQ 76
++K ++ E+Q
Sbjct: 181 YAENKSSWEQEVQ 193
>gi|239606992|gb|EEQ83979.1| nucleosome binding protein [Ajellomyces dermatitidis ER-3]
Length = 105
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 24 PKRGLSAYMFFANEQRDNVREENP--GISFGQVGKVLGERWKALNEKQRAPYEAKAAADK 81
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 82 KRYEDEKASYN 92
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 28 LSAYMFFANEQRDNVREENPGISFGQVGKVLGERWKALNEKQRAPYEAKAAADKKRYEDE 87
Query: 135 MTAYKNRSVAPVNEEADEEDDE 156
+Y R +A ++DDE
Sbjct: 88 KASYNAR------RKAQDDDDE 103
>gi|295671102|ref|XP_002796098.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284231|gb|EEH39797.1| nucleosome binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 103
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ ++++P + F + K ERWK ++EK++ + A DK
Sbjct: 26 PKRGLSAYMFFANEQRDNVREENP--GISFGQVGKVLGERWKALNEKQRAPYEAKAAADK 83
Query: 69 KRYDTEMQSYT 79
KRY+ E SY
Sbjct: 84 KRYEDEKASYN 94
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%)
Query: 50 KTMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKW 109
K S K K R E KD + +Y A E+R ++++NP G + K LG++W
Sbjct: 5 KVSSRKSKTRGVEKKKKDPNAPKRGLSAYMFFANEQRDNVREENPGISFGQVGKVLGERW 64
Query: 110 ADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
++ + YE A DK RYE E +Y
Sbjct: 65 KALNEKQRAPYEAKAAADKKRYEDEKASY 93
>gi|49258307|pdb|1J3D|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 78
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 82 AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E R KIK ++P +GD AK+LG+ W++ K YEQ A K K +YEK++ AY+ +
Sbjct: 19 CSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 78
>gi|390337111|ref|XP_782477.3| PREDICTED: uncharacterized protein LOC577135 [Strongylocentrotus
purpuratus]
Length = 694
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
PR +AYA F+ RE +++ HPE VV + S + W + KKR+ +M KDK
Sbjct: 429 PRPPSSAYAMFLAEQREGYRESHPE--VVGRKVSSLLGKMWTGLPPDVKKRYLDMEKKDK 486
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 487 ERYIKEIKEY 496
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 77 SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
+Y E+R ++ +PE ++ LGK W + P VK +Y M +KDK RY KE+
Sbjct: 435 AYAMFLAEQREGYRESHPEVVGRKVSSLLGKMWTGLPPDVKKRYLDMEKKDKERYIKEIK 494
Query: 137 AYKNRS 142
Y+ S
Sbjct: 495 EYQESS 500
>gi|320580355|gb|EFW94578.1| high-mobility group non-histone chromosomal protein, putative
[Ogataea parapolymorpha DL-1]
Length = 91
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++ +NP G I K LG+KW +D + K YE AE DK RYE E
Sbjct: 23 LSAYMFFANEQRDIVRAENPGIAFGQIGKLLGEKWKALDEAGKAPYEAKAEADKKRYELE 82
Query: 135 MTAY 138
+ Y
Sbjct: 83 KSEY 86
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P + F + K E+WK + E K + A+ DK
Sbjct: 19 PKRSLSAYMFFANEQRDIVRAENP--GIAFGQIGKLLGEKWKALDEAGKAPYEAKAEADK 76
Query: 69 KRYDTEMQSYT 79
KRY+ E YT
Sbjct: 77 KRYELEKSEYT 87
>gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba var. minor]
Length = 74
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ +A+ F+ RE++KK HP V A K C E WK++SE+EK + + A K
Sbjct: 5 KPKRPPSAFFVFMADFREQYKKDHPNNKSV-AAVGKACGEEWKSLSEEEKAPYVDRALKK 63
Query: 68 KKRYDTEMQSY 78
K+ Y+ +Q+Y
Sbjct: 64 KEEYEITLQAY 74
>gi|326475470|gb|EGD99479.1| nucleosome binding protein [Trichophyton tonsurans CBS 112818]
Length = 102
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE+ A DK RYE E
Sbjct: 29 LSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAATDKQRYEDE 88
Query: 135 MTAYKNR 141
AY +R
Sbjct: 89 KAAYNSR 95
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY F R ++++P N+ F + K ERWK +S+K++ + E A DK
Sbjct: 25 PKRGLSAYMIFANEQRAAVREENP--NITFGQVGKVLGERWKALSDKQRVPYEEKAATDK 82
Query: 69 KRYDTEMQSYT 79
+RY+ E +Y
Sbjct: 83 QRYEDEKAAYN 93
>gi|322699087|gb|EFY90852.1| nucleosome binding protein [Metarhizium acridum CQMa 102]
gi|322708956|gb|EFZ00533.1| nucleosome binding protein [Metarhizium anisopliae ARSEF 23]
Length = 92
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE + ++P N+ F + K ERWK +++K++ + A DK
Sbjct: 18 PKRGLSAYMFFANEQRENVRAENP--NITFGQVGKVLGERWKALNDKQRAPYEAKAAADK 75
Query: 69 KRYDTEMQSY 78
KRY+ E ++
Sbjct: 76 KRYEDEKAAF 85
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++ +NP G + K LG++W ++ + YE A DK RYE E
Sbjct: 22 LSAYMFFANEQRENVRAENPNITFGQVGKVLGERWKALNDKQRAPYEAKAAADKKRYEDE 81
Query: 135 MTAYK 139
A++
Sbjct: 82 KAAFQ 86
>gi|403217000|emb|CCK71495.1| hypothetical protein KNAG_0H00800 [Kazachstania naganishii CBS
8797]
Length = 118
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+AY FF R+ K ++P N F + K E+WK MS ++K+ + A DK
Sbjct: 45 PKRSMSAYMFFANENRDIVKSENP--NATFGQLGKLLGEKWKNMSTEDKEPYDAKAAADK 102
Query: 69 KRYDTEMQSY 78
KRY++E + Y
Sbjct: 103 KRYESEKELY 112
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 40/88 (45%)
Query: 51 TMSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWA 110
MS +E K+ KD M +Y A E R +K +NP G + K LG+KW
Sbjct: 25 VMSTREPKKRVTRKKKDPNAPKRSMSAYMFFANENRDIVKSENPNATFGQLGKLLGEKWK 84
Query: 111 DVDPSVKTKYEQMAEKDKARYEKEMTAY 138
++ K Y+ A DK RYE E Y
Sbjct: 85 NMSTEDKEPYDAKAAADKKRYESEKELY 112
>gi|327296079|ref|XP_003232734.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
gi|326465045|gb|EGD90498.1| non-histone chromosomal protein 6 [Trichophyton rubrum CBS 118892]
Length = 102
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE+ A DK RYE E
Sbjct: 29 LSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAATDKQRYEDE 88
Query: 135 MTAYKNR 141
AY +R
Sbjct: 89 KAAYNSR 95
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY F R ++++P N+ F + K ERWK +S+K++ + E A DK
Sbjct: 25 PKRGLSAYMIFANEQRAAVREENP--NITFGQVGKVLGERWKALSDKQRVPYEEKAATDK 82
Query: 69 KRYDTEMQSYT 79
+RY+ E +Y
Sbjct: 83 QRYEDEKAAYN 93
>gi|409075858|gb|EKM76234.1| hypothetical protein AGABI1DRAFT_16670, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426193694|gb|EKV43627.1| hypothetical protein AGABI2DRAFT_56560, partial [Agaricus bisporus
var. bisporus H97]
Length = 106
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN--RSV 143
R +IK +NPE G G++ K LG KW ++D K Y + A DK R EKE +Y + +S
Sbjct: 38 RERIKTENPEAGFGEVGKLLGAKWKEMDEEEKKPYVEQATADKTRAEKEKASYDSGKKSA 97
Query: 144 APVNEEADE 152
+ +EE DE
Sbjct: 98 SGDDEEEDE 106
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF Q RE K ++PE F E K +WK M E+EKK + E A DK
Sbjct: 23 PKRALSAYMFFSQDWRERIKTENPE--AGFGEVGKLLGAKWKEMDEEEKKPYVEQATADK 80
Query: 69 KRYDTEMQSY 78
R + E SY
Sbjct: 81 TRAEKEKASY 90
>gi|147866286|emb|CAN79926.1| hypothetical protein VITISV_042446 [Vitis vinifera]
Length = 644
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+ + FF Q RE KK P + F E + ++WK M+ +EK+ + A DK
Sbjct: 559 PKRAMSGFMFFSQTERENIKKSTP--GIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQADK 616
Query: 69 KRYDTEMQSY 78
KRY E+ Y
Sbjct: 617 KRYRDEISGY 626
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R IK+ P ++ + LG KW + K YE A+ DK RY E++ YK+ P
Sbjct: 574 RENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQADKKRYRDEISGYKSNP-QP 632
Query: 146 VNEEADEEDD 155
+N ++ E D
Sbjct: 633 MNVDSGNESD 642
>gi|313224350|emb|CBY20139.1| unnamed protein product [Oikopleura dioica]
Length = 91
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 82 AGEKRGKIKQDNPEYG-VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKN 140
A + R K+ PE V ++AK+LG W +VD K KY+ AE++KA+Y +EM AY+N
Sbjct: 22 AADNRADAKKCLPEGSRVSEVAKKLGVMWKEVDAKTKEKYQSQAEENKAKYAEEMEAYRN 81
Query: 141 RSVAPVNE 148
N+
Sbjct: 82 SQAVTAND 89
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ TA+ F R + KK PE + V +E +KK WK + K K+++ A+++K
Sbjct: 11 PKRPQTAFFLFAADNRADAKKCLPEGSRV-SEVAKKLGVMWKEVDAKTKEKYQSQAEENK 69
Query: 69 KRYDTEMQSY 78
+Y EM++Y
Sbjct: 70 AKYAEEMEAY 79
>gi|225452706|ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
gi|296082859|emb|CBI22160.3| unnamed protein product [Vitis vinifera]
Length = 644
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+ + FF Q RE KK P + F E + ++WK M+ +EK+ + A DK
Sbjct: 559 PKRAMSGFMFFSQTERENIKKSTP--GIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQADK 616
Query: 69 KRYDTEMQSY 78
KRY E+ Y
Sbjct: 617 KRYRDEISGY 626
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAP 145
R IK+ P ++ + LG KW + K YE A+ DK RY E++ YK+ P
Sbjct: 574 RENIKKSTPGIAFTEVGRVLGDKWKKMTAEEKEPYEAKAQADKKRYRDEISGYKSNP-QP 632
Query: 146 VNEEADEEDD 155
+N ++ E D
Sbjct: 633 MNVDSGNESD 642
>gi|444519462|gb|ELV12862.1| High mobility group protein B1 [Tupaia chinensis]
Length = 157
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 23/92 (25%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKR-----------------------GK 88
MS KEK RF +MA DK RY+ EM++Y PP GE + +
Sbjct: 1 MSAKEKGRFEDMAKVDKARYEREMKTYIPPEGETKKFKDPSAPKRPPSAFFLFCSEYHPQ 60
Query: 89 IKQDNPEYGVGDIAKELGKKWADVDPSVKTKY 120
IK ++P+ + D AK+LG+ W + K Y
Sbjct: 61 IKGEHPDISIRDAAKKLGEMWNNTAADGKQPY 92
>gi|50292849|ref|XP_448857.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528170|emb|CAG61827.1| unnamed protein product [Candida glabrata]
Length = 503
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
K P+ +AY F R E ++ P+ V E SK + RW+ +S+ EKK +++
Sbjct: 302 KKQGPKRPSSAYFLFSMSIRNELLQQFPDAKV--PELSKLASARWRELSDDEKKPYYDEF 359
Query: 65 DKDKKRYDT---EMQSYTPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWAD 111
+ ++Y E + PP E R + ++NP+ + +I K +G KW D
Sbjct: 360 RTNWEKYRVLRDEYEKTLPPKRPSGPFIQFTQEIRPIVVKENPDKNLIEITKIIGSKWRD 419
Query: 112 VDPSVKTKYEQMAEKDKARYEK 133
+DP+ K +Y +M +K +E+
Sbjct: 420 LDPAKKNEYTEMYKKRLKEWEE 441
>gi|330804473|ref|XP_003290219.1| hypothetical protein DICPUDRAFT_15851 [Dictyostelium purpureum]
gi|325079683|gb|EGC33272.1| hypothetical protein DICPUDRAFT_15851 [Dictyostelium purpureum]
Length = 630
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
PR ++AY ++ + REE K+K+P+ V ++ SK +WK ++ E+K +++ A +DK
Sbjct: 233 PRTNVSAYFHYMNINREEEKQKNPD--VPPSDISKILGAKWKQLTPDEQKEYYDRAREDK 290
Query: 69 KRYDTEMQSY 78
+R+D EM Y
Sbjct: 291 QRFDNEMVEY 300
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 73 TEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
T + +Y R + KQ NP+ DI+K LG KW + P + +Y A +DK R++
Sbjct: 235 TNVSAYFHYMNINREEEKQKNPDVPPSDISKILGAKWKQLTPDEQKEYYDRAREDKQRFD 294
Query: 133 KEMTAYKNRS 142
EM Y ++
Sbjct: 295 NEMVEYHQKT 304
>gi|313224463|emb|CBY20253.1| unnamed protein product [Oikopleura dioica]
Length = 671
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+AY FF+ RE K+ +P + E SK ERW+ ++ +K ++ E A KDK
Sbjct: 552 PKRAMSAYFFFINEERENIKRDNP--GIKVTEVSKIAGERWREINANDKAKYEEKALKDK 609
Query: 69 KRYDTEMQSYTPPAGE 84
+RY+ E + GE
Sbjct: 610 ERYEREKAEFIAAGGE 625
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
M +Y E+R IK+DNP V +++K G++W +++ + K KYE+ A KDK RYE+E
Sbjct: 556 MSAYFFFINEERENIKRDNPGIKVTEVSKIAGERWREINANDKAKYEEKALKDKERYERE 615
>gi|401402785|ref|XP_003881334.1| high mobility group protein, related [Neospora caninum Liverpool]
gi|325115746|emb|CBZ51301.1| high mobility group protein, related [Neospora caninum Liverpool]
Length = 94
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ FF + REE +K+PE AE K E W +S+ +KK + A DK
Sbjct: 20 PKRPLSAFIFFSKDKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYESKAVADK 79
Query: 69 KRYDTEMQSY 78
RY+ EM +Y
Sbjct: 80 ARYEREMIAY 89
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 84 EKRGKIKQDNPEYG--VGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
+KR +I + NPE + ++ K +G+ W + + K YE A DKARYE+EM AYK
Sbjct: 33 DKREEIIRKNPELKSKLAEVGKMVGEAWGKLSDAQKKPYESKAVADKARYEREMIAYK 90
>gi|194752689|ref|XP_001958652.1| GF12460 [Drosophila ananassae]
gi|190619950|gb|EDV35474.1| GF12460 [Drosophila ananassae]
Length = 728
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 3 KEKDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHE 62
KE D KP+ TA+ ++ RE+ KK++P + E +KK E WK + K+K ++ E
Sbjct: 550 KESD-KPKRATTAFMLWLNDTREKIKKENP--GIKVTEIAKKGGEMWKEL--KDKSKWEE 604
Query: 63 MADKDKKRYDTEMQSYTPPAG----EKRGK 88
A KDK RY EM++Y P G EK GK
Sbjct: 605 AAAKDKLRYQEEMRNYKPSGGGSDNEKGGK 634
>gi|391325154|ref|XP_003737104.1| PREDICTED: high mobility group protein 20A-like [Metaseiulus
occidentalis]
Length = 391
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 2 PKEKDVK-PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRF 60
P+ KDV P+ + Y F+ RE +K +PE V FA +K A+ W + +++K+++
Sbjct: 99 PRAKDVNAPKAPINGYVRFLNENRERCRKVNPE--VAFANITKLLAQEWSQLKQEDKQKY 156
Query: 61 HEMADKDKKRYDTEMQSY 78
+ A+KD++RY E++ Y
Sbjct: 157 LDAAEKDRERYMKEVEEY 174
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E R + ++ NPE +I K L ++W+ + K KY AEKD+ RY KE
Sbjct: 111 INGYVRFLNENRERCRKVNPEVAFANITKLLAQEWSQLKQEDKQKYLDAAEKDRERYMKE 170
Query: 135 MTAYK 139
+ Y+
Sbjct: 171 VEEYQ 175
>gi|402578739|gb|EJW72692.1| hypothetical protein WUBG_16399, partial [Wuchereria bancrofti]
Length = 116
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
+KR +++Q +PE+ VG +A+ELG+ W + + YE+ A +DK RY +EM YK V
Sbjct: 9 DKRPEVQQQHPEWKVGQVAQELGRFWKALGEEERAVYERKALEDKERYAEEMRNYKGTPV 68
Query: 144 APVN 147
+
Sbjct: 69 QTIT 72
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+A+ FF R E +++HPE V + +++ WK + E+E+ + A +DK+RY
Sbjct: 1 SAFFFFSHDKRPEVQQQHPEWKV--GQVAQELGRFWKALGEEERAVYERKALEDKERYAE 58
Query: 74 EMQSY 78
EM++Y
Sbjct: 59 EMRNY 63
>gi|302497713|ref|XP_003010856.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
gi|291174401|gb|EFE30216.1| hypothetical protein ARB_02895 [Arthroderma benhamiae CBS 112371]
Length = 106
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY F R ++++P N+ F + K ERWK +S+K++ + E A DK
Sbjct: 24 PKRGLSAYMIFANEQRAAVREENP--NITFGQVGKVLGERWKALSDKQRVPYEEKAATDK 81
Query: 69 KRYDTEMQSYTPPAGEKR 86
+RY+ E +Y + R
Sbjct: 82 QRYEDEKAAYNTNINQSR 99
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE+ A DK RYE E
Sbjct: 28 LSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAATDKQRYEDE 87
Query: 135 MTAY 138
AY
Sbjct: 88 KAAY 91
>gi|308805086|ref|XP_003079855.1| COG0550: Topoisomerase IA (ISS) [Ostreococcus tauri]
gi|116058312|emb|CAL53501.1| COG0550: Topoisomerase IA (ISS) [Ostreococcus tauri]
Length = 1006
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 82 AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
+ ++R +K +NP + +GDIAK LG++WA +DP K KYE A+ K + + T
Sbjct: 944 SADERANVKAENPTFKIGDIAKALGERWATLDPERKAKYESDAKAAKEAWTRVAT 998
>gi|255539248|ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B, putative [Ricinus communis]
Length = 145
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ +A+ F++ RE++KK+HP+ V A K +RWK+MSE EK F A+K
Sbjct: 37 KPKRPASAFFVFMEEFREQYKKEHPKNKSV-AAVGKAGGDRWKSMSESEKAPFVAKAEKR 95
Query: 68 KKRYDTEMQSYT 79
K Y+ ++++Y
Sbjct: 96 KIEYEKKLKAYN 107
>gi|321259756|ref|XP_003194598.1| nonhistone protein 6 [Cryptococcus gattii WM276]
gi|317461070|gb|ADV22811.1| Nonhistone protein 6, putative [Cryptococcus gattii WM276]
Length = 110
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ ++AY FFVQ RE K ++PE F + K +W+ M+E EKK + A D
Sbjct: 27 KPKRALSAYMFFVQDYRERIKAENPE--ATFGDVGKLLGIKWREMNENEKKPYEAKAKAD 84
Query: 68 KKRYDTEMQSY 78
K+R D E Y
Sbjct: 85 KERADRENADY 95
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK 139
R +IK +NPE GD+ K LG KW +++ + K YE A+ DK R ++E YK
Sbjct: 43 RERIKAENPEATFGDVGKLLGIKWREMNENEKKPYEAKAKADKERADRENADYK 96
>gi|302803281|ref|XP_002983394.1| hypothetical protein SELMODRAFT_117986 [Selaginella
moellendorffii]
gi|300149079|gb|EFJ15736.1| hypothetical protein SELMODRAFT_117986 [Selaginella
moellendorffii]
Length = 123
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ TA+ F++ R+ +KK HP+ V A K + WK++S+KEK+ +H A K
Sbjct: 21 QPKKPATAFFIFLEEFRQTYKKDHPDVKGV-AAIGKAGGDMWKSLSDKEKEPYHAKAAKR 79
Query: 68 KKRYDTEMQSYT 79
K YD ++++Y
Sbjct: 80 KADYDKDLEAYN 91
>gi|451996730|gb|EMD89196.1| hypothetical protein COCHEDRAFT_1107529 [Cochliobolus
heterostrophus C5]
Length = 105
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R K+++DNP G++ K LG+KW ++ + YE A DK RYE+E
Sbjct: 31 LSAYMFFANEQREKVREDNPGIKFGEVGKLLGEKWKALNDKQRQPYEAKAALDKKRYEQE 90
Query: 135 MTAY 138
AY
Sbjct: 91 KAAY 94
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE+ ++ +P + F E K E+WK +++K+++ + A DK
Sbjct: 27 PKRGLSAYMFFANEQREKVREDNP--GIKFGEVGKLLGEKWKALNDKQRQPYEAKAALDK 84
Query: 69 KRYDTEMQSYT 79
KRY+ E +YT
Sbjct: 85 KRYEQEKAAYT 95
>gi|367003789|ref|XP_003686628.1| hypothetical protein TPHA_0G03540 [Tetrapisispora phaffii CBS 4417]
gi|357524929|emb|CCE64194.1| hypothetical protein TPHA_0G03540 [Tetrapisispora phaffii CBS 4417]
Length = 452
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +AY F R E ++HP V E SK + RWK +++++KK F++ +
Sbjct: 252 PKRPSSAYFLFSMSIRNELLQEHPHAKV--PELSKLASIRWKDLTDEQKKPFYDEFRTNW 309
Query: 69 KRYDTEMQSY---TPP----------AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPS 115
++Y Y PP + R + ++NP+ + +I K +G+KW +DP
Sbjct: 310 EKYRVLRDDYEKTLPPKRPSGPFIQFTQDIRPLVVKENPDRNLIEITKIIGEKWRQLDPV 369
Query: 116 VKTKY 120
K +Y
Sbjct: 370 KKAEY 374
>gi|356523473|ref|XP_003530363.1| PREDICTED: high mobility group B protein 13-like isoform 2 [Glycine
max]
Length = 467
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+KP+ M+AY F + + EN F E K +E WK M+E++K+ + EMA K
Sbjct: 265 LKPKHPMSAYFLFTN----DRRAALAAENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKK 320
Query: 67 DKKRYDTEMQSY 78
+K++Y EM++Y
Sbjct: 321 NKEQYALEMEAY 332
>gi|390472813|ref|XP_002756398.2| PREDICTED: transcription factor A, mitochondrial-like [Callithrix
jacchus]
Length = 287
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ TAY +V C +E K+ P++ + K E WK +S EKK + ++A+ D
Sbjct: 194 KPKKARTAYNIYVAECFQEAKEGTPQKKL------KTVVENWKNLSSSEKKIYVQLAEDD 247
Query: 68 KKRYDTEMQSY 78
K RYD E++S+
Sbjct: 248 KIRYDNEIKSW 258
>gi|302754440|ref|XP_002960644.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
gi|300171583|gb|EFJ38183.1| hypothetical protein SELMODRAFT_75453 [Selaginella moellendorffii]
Length = 134
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ TA+ F++ R+ +KK HP+ V A K + WK++S+KEK+ +H A K
Sbjct: 35 QPKKPATAFFIFLEEFRQTYKKDHPDVKGV-AAIGKAGGDMWKSLSDKEKEPYHAKAAKR 93
Query: 68 KKRYDTEMQSYT 79
K YD ++++Y
Sbjct: 94 KADYDKDLEAYN 105
>gi|121483890|gb|ABM54245.1| HMG20A [Pan paniscus]
Length = 194
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 103 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 161 ERYMKELEQY 170
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY KE
Sbjct: 107 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKE 166
Query: 135 MTAYK 139
+ Y+
Sbjct: 167 LEQYQ 171
>gi|378727181|gb|EHY53640.1| non-histone chromosomal protein 6 [Exophiala dermatitidis
NIH/UT8656]
Length = 102
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF RE ++++P + F + K +RWK ++EK+++ + + A DK
Sbjct: 24 PKRGLSAYMFFANEQRESVREENP--GISFGQVGKVLGDRWKALNEKQREPYEKKAQADK 81
Query: 69 KRYDTEMQSY 78
KRY+ E Y
Sbjct: 82 KRYEDEKAKY 91
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG +W ++ + YE+ A+ DK RYE E
Sbjct: 28 LSAYMFFANEQRESVREENPGISFGQVGKVLGDRWKALNEKQREPYEKKAQADKKRYEDE 87
Query: 135 MTAYK 139
Y+
Sbjct: 88 KAKYQ 92
>gi|403347541|gb|EJY73196.1| hypothetical protein OXYTRI_05674 [Oxytricha trifallax]
Length = 710
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ ++AY +F Q RE+ K++HPE + E + + +W+ M ++K +++MA D
Sbjct: 405 RPKKPLSAYIYFSQEFREKLKEQHPEWSS--NEIMRHVSNKWQHMDRQQKDPYNQMAALD 462
Query: 68 KKRYDTEMQSYT 79
K RYD ++ +T
Sbjct: 463 KSRYDKQLLEFT 474
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y + E R K+K+ +PE+ +I + + KW +D K Y QMA DK+RY+K+
Sbjct: 410 LSAYIYFSQEFREKLKEQHPEWSSNEIMRHVSNKWQHMDRQQKDPYNQMAALDKSRYDKQ 469
Query: 135 MTAYKNRSVAP 145
+ + + AP
Sbjct: 470 LLEFTQMAEAP 480
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 33/161 (20%)
Query: 5 KDVKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMA 64
+D+ R +AY F ++ R+ +++P + E K+ A+ W+ +S++EK R+ + A
Sbjct: 131 QDLPIRKPQSAYVIFGKMKRDLIMRQNP--GIKVTEVVKQIAKLWQALSKEEKLRYKDRA 188
Query: 65 DK--------------DKKRYDTEMQSYTPP-----------------AGEKRGKIKQDN 93
+ DK+RY E++ T E R K+ ++N
Sbjct: 189 KQGKFEFYDVSSQNIIDKERYIQELRELTKSNKNLEKPKKPLTPYMLFVRETRPKVVREN 248
Query: 94 PEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
P DI KE+G+ W ++ ++ ++ D RY+KE
Sbjct: 249 PNIASLDIMKEVGRIWQNITKDELQYFKIKSDSDMERYKKE 289
>gi|224061734|ref|XP_002194749.1| PREDICTED: high mobility group protein 20A [Taeniopygia guttata]
Length = 348
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 104 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKRRYLDEADRDK 161
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 162 ERYMRELEQY 171
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY +E
Sbjct: 108 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRE 167
Query: 135 MTAYK 139
+ Y+
Sbjct: 168 LEQYQ 172
>gi|260820323|ref|XP_002605484.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
gi|229290818|gb|EEN61494.1| hypothetical protein BRAFLDRAFT_126796 [Branchiostoma floridae]
Length = 375
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R K++QDNP +I + LG +W+ + P K +Y AEKDK RY KE
Sbjct: 129 LTGYVRFLNERREKMRQDNPNVPFPEITRMLGNEWSKLAPHEKQQYLDEAEKDKERYMKE 188
Query: 135 MTAYK 139
+ Y+
Sbjct: 189 LEEYQ 193
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 5 KDVK-PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KDV P+ +T Y F+ RE+ ++ +P NV F E ++ W ++ EK+++ +
Sbjct: 120 KDVNAPKAPLTGYVRFLNERREKMRQDNP--NVPFPEITRMLGNEWSKLAPHEKQQYLDE 177
Query: 64 ADKDKKRYDTEMQSY 78
A+KDK+RY E++ Y
Sbjct: 178 AEKDKERYMKELEEY 192
>gi|356523471|ref|XP_003530362.1| PREDICTED: high mobility group B protein 13-like isoform 1 [Glycine
max]
Length = 478
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+KP+ M+AY F + + EN F E K +E WK M+E++K+ + EMA K
Sbjct: 265 LKPKHPMSAYFLFTN----DRRAALAAENKNFLEVPKITSEEWKNMTEEQKRPYEEMAKK 320
Query: 67 DKKRYDTEMQSY 78
+K++Y EM++Y
Sbjct: 321 NKEQYALEMEAY 332
>gi|290562443|gb|ADD38618.1| Non-histone chromosomal protein 6 [Lepeophtheirus salmonis]
Length = 125
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 11 GRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKR 70
G T+Y +FV R+ +K +P + F++ SK WK MSEK+K FH + DK R
Sbjct: 34 GLRTSYLYFVCEQRKIIRKMNPSFS--FSKVSKLLGIEWKKMSEKDKHVFHVKSIHDKHR 91
Query: 71 YDTEMQSYT 79
YD EM YT
Sbjct: 92 YDREMLDYT 100
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 77 SYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMT 136
SY E+R I++ NP + ++K LG +W + K + + DK RY++EM
Sbjct: 38 SYLYFVCEQRKIIRKMNPSFSFSKVSKLLGIEWKKMSEKDKHVFHVKSIHDKHRYDREML 97
Query: 137 AYKNRSVAPVNEEADEEDD 155
Y + V ++ E D
Sbjct: 98 DYTQKKVNGLHSALINERD 116
>gi|124111160|gb|ABM91961.1| HMG20A [Pan troglodytes]
Length = 194
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 103 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 161 ERYMKELEQY 170
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY KE
Sbjct: 107 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKE 166
Query: 135 MTAYK 139
+ Y+
Sbjct: 167 LEQYQ 171
>gi|443710428|gb|ELU04681.1| hypothetical protein CAPTEDRAFT_155070 [Capitella teleta]
Length = 269
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y ++R +I+++NP +I K LG +W+ + P K +Y AE+DK RY KE
Sbjct: 30 LTGYVRFLSDRREQIREENPSATFTEITKRLGAEWSKLPPMEKQRYLDEAERDKERYLKE 89
Query: 135 MTAY 138
+ AY
Sbjct: 90 LEAY 93
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ ++++P + F E +K+ W + EK+R+ + A++DK
Sbjct: 26 PKQPLTGYVRFLSDRREQIREENP--SATFTEITKRLGAEWSKLPPMEKQRYLDEAERDK 83
Query: 69 KRYDTEMQSY 78
+RY E+++Y
Sbjct: 84 ERYLKELEAY 93
>gi|401623234|gb|EJS41340.1| nhp6ap [Saccharomyces arboricola H-6]
Length = 93
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P+ + F + KK E+WK ++ +EK + A DK
Sbjct: 21 PKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKLPYEAKAQADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP+ G + K+LG+KW + P K YE A+ DK RYE E
Sbjct: 25 LSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKLPYEAKAQADKKRYESE 84
Query: 135 MTAYKNRSVA 144
Y N ++A
Sbjct: 85 KELY-NATLA 93
>gi|327283394|ref|XP_003226426.1| PREDICTED: high mobility group protein 20A-like [Anolis
carolinensis]
Length = 347
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 103 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKRRYLDEADRDK 160
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 161 ERYMRELEQY 170
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY +E
Sbjct: 107 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRE 166
Query: 135 MTAYK 139
+ Y+
Sbjct: 167 LEQYQ 171
>gi|326926383|ref|XP_003209381.1| PREDICTED: high mobility group protein 20A-like [Meleagris
gallopavo]
Length = 348
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 104 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKRRYLDEADRDK 161
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 162 ERYMRELEQY 171
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY +E
Sbjct: 108 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRE 167
Query: 135 MTAYK 139
+ Y+
Sbjct: 168 LEQYQ 172
>gi|356513291|ref|XP_003525347.1| PREDICTED: high mobility group B protein 13-like [Glycine max]
Length = 473
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+KP+ M+AY F + + EN F E K AE WK M+E++K+ + EMA K
Sbjct: 263 LKPKHPMSAYFLFTN----DRRAALVAENKNFLEVPKITAEEWKNMTEEQKRPYEEMAKK 318
Query: 67 DKKRYDTEMQSY 78
+K++Y EM+ Y
Sbjct: 319 NKEKYALEMEVY 330
>gi|315051466|ref|XP_003175107.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
gi|311340422|gb|EFQ99624.1| non-histone chromosomal protein 6 [Arthroderma gypseum CBS 118893]
Length = 102
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE+ A DK RYE E
Sbjct: 29 LSAYMIFANEQRASVREENPSITFGQVGKVLGERWKALTDKQRKPYEEKAATDKQRYEDE 88
Query: 135 MTAYKNR 141
AY +R
Sbjct: 89 KAAYNSR 95
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY F R ++++P ++ F + K ERWK +++K++K + E A DK
Sbjct: 25 PKRGLSAYMIFANEQRASVREENP--SITFGQVGKVLGERWKALTDKQRKPYEEKAATDK 82
Query: 69 KRYDTEMQSY 78
+RY+ E +Y
Sbjct: 83 QRYEDEKAAY 92
>gi|71896259|ref|NP_001025565.1| high mobility group protein 20A [Gallus gallus]
gi|75571328|sp|Q5ZKF4.1|HM20A_CHICK RecName: Full=High mobility group protein 20A; AltName: Full=HMG
box-containing protein 20A
gi|53131076|emb|CAG31789.1| hypothetical protein RCJMB04_11c24 [Gallus gallus]
Length = 348
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 104 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKRRYLDEADRDK 161
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 162 ERYMRELEQY 171
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY +E
Sbjct: 108 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRE 167
Query: 135 MTAYK 139
+ Y+
Sbjct: 168 LEQYQ 172
>gi|409043132|gb|EKM52615.1| hypothetical protein PHACADRAFT_164552 [Phanerochaete carnosa
HHB-10118-sp]
Length = 115
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAE 125
KDK + +Y + + R ++K +NP+ G++ K LG KW ++D K Y + AE
Sbjct: 25 KDKNAPKRALSAYMFFSQDWRERVKAENPDASFGELGKLLGTKWKELDEEEKKPYIEQAE 84
Query: 126 KDKARYEKEMTAYKNRSV 143
+DKAR E+E Y N+ V
Sbjct: 85 RDKARAEREKKDYDNKKV 102
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF Q RE K ++P + F E K +WK + E+EKK + E A++DK
Sbjct: 30 PKRALSAYMFFSQDWRERVKAENP--DASFGELGKLLGTKWKELDEEEKKPYIEQAERDK 87
Query: 69 KRYDTEMQSY 78
R + E + Y
Sbjct: 88 ARAEREKKDY 97
>gi|449685055|ref|XP_002156373.2| PREDICTED: high mobility group protein homolog TDP-1-like, partial
[Hydra magnipapillata]
Length = 218
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 14 TAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDT 73
+AY +FV R KKK N V E +K C W M E EK ++E + DK RY
Sbjct: 32 SAYIYFVSDYRLVLKKKGKATNKV-NEVAKMCGTAWNAMKENEKAPYYEKYNIDKARYLK 90
Query: 74 EMQSYTPPAGEKRGKIKQDNPEYG--VGDIAKEL---------------GKKWADVDPSV 116
E ++ G+ K K+ Y + D +++ G+KW +
Sbjct: 91 EKEALDKKMGKDPNKPKRCQTAYFFFLHDFREQMKGKALLEGEKIPALAGEKWRSMTDDE 150
Query: 117 KTKYEQMAEKDKARYEKEMTAYKNRS 142
K Y M +KDK RYEK M +K+++
Sbjct: 151 KKVYNDMVQKDKQRYEKAMEEWKSKN 176
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ TAY FF+ RE+ K K E + E+W++M++ EKK +++M KD
Sbjct: 105 KPKRCQTAYFFFLHDFREQMKGKALLEGEKIPALA---GEKWRSMTDDEKKVYNDMVQKD 161
Query: 68 KKRYDTEMQSY 78
K+RY+ M+ +
Sbjct: 162 KQRYEKAMEEW 172
>gi|291242470|ref|XP_002741130.1| PREDICTED: high mobility group 20A-like [Saccoglossus kowalevskii]
Length = 375
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 5 KDVK-PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEM 63
KDV PR +T Y F+ RE+ + +P ++ F + +K W +S+ EK+R+ +
Sbjct: 108 KDVNAPRAPLTGYIRFLNDRREKVRSDNP--SLTFPDVTKMLGNEWSKLSQAEKQRYLDE 165
Query: 64 ADKDKKRYDTEMQSY 78
A+KDK+RY E++ Y
Sbjct: 166 AEKDKERYMKELEQY 180
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y ++R K++ DNP D+ K LG +W+ + + K +Y AEKDK RY KE
Sbjct: 117 LTGYIRFLNDRREKVRSDNPSLTFPDVTKMLGNEWSKLSQAEKQRYLDEAEKDKERYMKE 176
Query: 135 MTAYK 139
+ Y+
Sbjct: 177 LEQYQ 181
>gi|366988547|ref|XP_003674040.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS
4309]
gi|342299903|emb|CCC67659.1| hypothetical protein NCAS_0A11010 [Naumovozyma castellii CBS
4309]
Length = 101
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ K ++P N+ F + K E+WK ++ +EK+ + A DK
Sbjct: 20 PKRGLSAYMFFANENRDIVKAENP--NITFGQVGKVLGEKWKALTAEEKEPYEAKAKADK 77
Query: 69 KRYDTEMQSY 78
KRY++E + Y
Sbjct: 78 KRYESEKELY 87
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 52 MSEKEKKRFHEMADKDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWAD 111
M KE KR + KD + +Y A E R +K +NP G + K LG+KW
Sbjct: 1 MPPKEAKRRTQRRKKDPNAPKRGLSAYMFFANENRDIVKAENPNITFGQVGKVLGEKWKA 60
Query: 112 VDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVAPVNEEADEEDDE 156
+ K YE A+ DK RYE E Y V AD+E++E
Sbjct: 61 LTAEEKEPYEAKAKADKKRYESEKELYMATQV-----HADDEEEE 100
>gi|45187563|ref|NP_983786.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|74694642|sp|Q75B82.1|NHP6_ASHGO RecName: Full=Non-histone chromosomal protein 6
gi|44982301|gb|AAS51610.1| ADL310Wp [Ashbya gossypii ATCC 10895]
gi|374106998|gb|AEY95906.1| FADL310Wp [Ashbya gossypii FDAG1]
Length = 94
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+AY FF R+ + ++P + F + + E+WK +S+ EK+ + A+ DK
Sbjct: 21 PKRAMSAYMFFANENRDIVRAENP--GISFGQVGRVLGEKWKALSDDEKQPYEAKAEADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
M +Y A E R ++ +NP G + + LG+KW + K YE AE DK RYE E
Sbjct: 25 MSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEADKKRYESE 84
Query: 135 MTAY 138
Y
Sbjct: 85 KELY 88
>gi|302652822|ref|XP_003018251.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
gi|291181876|gb|EFE37606.1| hypothetical protein TRV_07738 [Trichophyton verrucosum HKI 0517]
Length = 132
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY F R ++++P N+ F + K ERWK +S+K++ + E A DK
Sbjct: 64 PKRGLSAYMIFANEQRAAVREENP--NITFGQVGKVLGERWKALSDKQRVPYEEKAATDK 121
Query: 69 KRYDTEMQSY 78
+RY+ E +Y
Sbjct: 122 QRYEDEKAAY 131
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E+R ++++NP G + K LG++W + + YE+ A DK RYE E
Sbjct: 68 LSAYMIFANEQRAAVREENPNITFGQVGKVLGERWKALSDKQRVPYEEKAATDKQRYEDE 127
Query: 135 MTAY 138
AY
Sbjct: 128 KAAY 131
>gi|217075707|gb|ACJ86213.1| unknown [Medicago truncatula]
gi|388513073|gb|AFK44598.1| unknown [Medicago truncatula]
Length = 142
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ +A+ F+ RE++KK HP N A K C E WK+MSE++K + A K
Sbjct: 36 KPKRPPSAFFVFMSDFREQYKKDHPN-NKSVAAVGKACGEAWKSMSEEDKAPYAARALKK 94
Query: 68 KKRYDTEMQSYT 79
K+ Y+ Q+Y
Sbjct: 95 KEEYEVATQAYN 106
>gi|344300446|gb|EGW30767.1| Non-histone chromosomal protein 6 [Spathaspora passalidarum NRRL
Y-27907]
Length = 93
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP G + K LG+KW + K YE AE DK RYEKE
Sbjct: 24 LSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALTADEKVPYENKAETDKKRYEKE 83
Query: 135 MTAYKNRS 142
Y R+
Sbjct: 84 KAEYAKRN 91
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P + F + K E+WK ++ EK + A+ DK
Sbjct: 20 PKRSLSAYMFFANENRDIVRAENP--GISFGQVGKLLGEKWKALTADEKVPYENKAETDK 77
Query: 69 KRYDTEMQSYT 79
KRY+ E Y
Sbjct: 78 KRYEKEKAEYA 88
>gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
KP+ +A+ F+ REE K+K+P+ V A K ERWK++SE EK F A+K
Sbjct: 41 KPKRAPSAFFVFMGEFREEFKQKNPKNKSV-AAVGKAAGERWKSLSESEKAPFVAKANKL 99
Query: 68 KKRYDTEMQSYT 79
K Y+ + SY
Sbjct: 100 KGEYNKAIASYN 111
>gi|67598449|ref|XP_666220.1| high mobility group protein [Cryptosporidium hominis TU502]
gi|54657173|gb|EAL35991.1| high mobility group protein [Cryptosporidium hominis]
Length = 95
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 13 MTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYD 72
MTA+ +F R E +P AE +K E W+ MSE +K F + AD DKKRY+
Sbjct: 27 MTAFMYFASSRRAEITAANPSLRSQVAEVAKILGEEWRGMSESDKAPFQKQADADKKRYE 86
Query: 73 TE 74
E
Sbjct: 87 RE 88
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEY--GVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYE 132
M ++ A +R +I NP V ++AK LG++W + S K +++ A+ DK RYE
Sbjct: 27 MTAFMYFASSRRAEITAANPSLRSQVAEVAKILGEEWRGMSESDKAPFQKQADADKKRYE 86
Query: 133 KE 134
+E
Sbjct: 87 RE 88
>gi|444730270|gb|ELW70657.1| High mobility group protein 20A [Tupaia chinensis]
Length = 321
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 103 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 161 ERYMKELEQY 170
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY KE
Sbjct: 107 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKE 166
Query: 135 MTAYK 139
+ Y+
Sbjct: 167 LEQYQ 171
>gi|393219482|gb|EJD04969.1| HMG-box [Fomitiporia mediterranea MF3/22]
Length = 114
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSVA 144
R ++K +NP+ G G++ K LG KW ++D S K Y + A +DKAR E+E Y+ +S
Sbjct: 48 RERVKAENPDAGFGEVGKLLGAKWKEMDESEKRPYIEQAARDKARAEEEKANYEKKSAG 106
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF Q RE K ++P + F E K +WK M E EK+ + E A +DK
Sbjct: 33 PKRALSAYMFFSQDWRERVKAENP--DAGFGEVGKLLGAKWKEMDESEKRPYIEQAARDK 90
Query: 69 KRYDTEMQSY 78
R + E +Y
Sbjct: 91 ARAEEEKANY 100
>gi|167396118|ref|XP_001741910.1| non-histone chromosomal protein [Entamoeba dispar SAW760]
gi|165893321|gb|EDR21615.1| non-histone chromosomal protein, putative [Entamoeba dispar
SAW760]
Length = 111
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ +AY ++ R K++HP ++ F E SK +E+WK + E+EKK + AD
Sbjct: 25 RPKKPQSAYFLYLNEHRASIKEEHP--DIKFTEISKVASEQWKALGEEEKKEYQAKADAA 82
Query: 68 KKRYDTEMQSYT 79
+++Y +M+ YT
Sbjct: 83 REQYKKDMEKYT 94
>gi|159462694|ref|XP_001689577.1| high mobility group protein [Chlamydomonas reinhardtii]
gi|158283565|gb|EDP09315.1| high mobility group protein [Chlamydomonas reinhardtii]
Length = 552
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++A+ +F R++ K ++P + F E K ERWK MS +EK + EMA KDK
Sbjct: 484 PKKNLSAFMYFSNSNRDKVKAENP--GIAFGEVGKLLGERWKAMSAEEKAPYDEMAAKDK 541
Query: 69 KRYDT 73
D+
Sbjct: 542 AGADS 546
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKA 129
R K+K +NP G++ K LG++W + K Y++MA KDKA
Sbjct: 497 SNRDKVKAENPGIAFGEVGKLLGERWKAMSAEEKAPYDEMAAKDKA 542
>gi|49258306|pdb|1J3C|A Chain A, Solution Structure Of The C-Terminal Domain Of The Hmgb2
Length = 79
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 82 AGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNR 141
E R KIK ++P +GD AK+LG+ W++ K YEQ A K K +YEK++ AY+ +
Sbjct: 20 CSEYRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 79
>gi|170575732|ref|XP_001893362.1| high mobility group protein [Brugia malayi]
gi|312082913|ref|XP_003143642.1| high mobility group protein [Loa loa]
gi|158600692|gb|EDP37804.1| high mobility group protein [Brugia malayi]
gi|393906921|gb|EJD74451.1| high mobility group protein, variant [Loa loa]
Length = 90
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
M ++ E R +IK+ P VGD+AK G +WA + + K+++E+ AE+DK RYE+E
Sbjct: 27 MSAFFIWMNENRDRIKK--PGMSVGDVAKAAGIEWAAM--TDKSQWEKRAEEDKKRYERE 82
Query: 135 MTAYKNR 141
+ AYKN+
Sbjct: 83 IAAYKNK 89
>gi|260812020|ref|XP_002600719.1| hypothetical protein BRAFLDRAFT_83461 [Branchiostoma floridae]
gi|229286008|gb|EEN56731.1| hypothetical protein BRAFLDRAFT_83461 [Branchiostoma floridae]
Length = 1072
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 15 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDKKRYDTE 74
AY+FF++ R +++PE + FAE ++ +RWK ++ +E++R+ MA +D++RY
Sbjct: 718 AYSFFIKDVRPTVCQENPEAD--FAEIARLIGQRWKQLANEERQRYEAMATRDQQRYQAH 775
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDP-SVKTKYEQMAEKDKAR 130
+++ E D+P +L K +DP S +T ++M + K+R
Sbjct: 776 LKTLQ----ESESNASSDSPV----PRKNKLSTKKRKLDPVSHQTLIDKMFQSQKSR 824
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 86 RGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEM 135
R + Q+NPE +IA+ +G++W + + +YE MA +D+ RY+ +
Sbjct: 727 RPTVCQENPEADFAEIARLIGQRWKQLANEERQRYEAMATRDQQRYQAHL 776
>gi|363755760|ref|XP_003648095.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892131|gb|AET41278.1| hypothetical protein Ecym_7459 [Eremothecium cymbalariae
DBVPG#7215]
Length = 94
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+AY FF R+ + ++P + F + + E+WK +S+ EK+ + A+ DK
Sbjct: 21 PKRAMSAYMFFANENRDIVRAENP--GISFGQVGRVLGEKWKALSDDEKQPYEAKAEADK 78
Query: 69 KRYDTEMQSYT 79
KRY++E + Y
Sbjct: 79 KRYESEKELYN 89
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
M +Y A E R ++ +NP G + + LG+KW + K YE AE DK RYE E
Sbjct: 25 MSAYMFFANENRDIVRAENPGISFGQVGRVLGEKWKALSDDEKQPYEAKAEADKKRYESE 84
Query: 135 MTAY 138
Y
Sbjct: 85 KELY 88
>gi|149410669|ref|XP_001505909.1| PREDICTED: high mobility group protein 20A [Ornithorhynchus
anatinus]
Length = 347
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 103 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 161 ERYMKELEQY 170
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY KE
Sbjct: 107 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKE 166
Query: 135 MTAYK 139
+ Y+
Sbjct: 167 LEQYQ 171
>gi|387016388|gb|AFJ50313.1| High mobility group protein 20A-like [Crotalus adamanteus]
Length = 345
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 101 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKRRYLDEADRDK 158
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 159 ERYMKELEQY 168
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY KE
Sbjct: 105 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMKE 164
Query: 135 MTAYK 139
+ Y+
Sbjct: 165 LEQYQ 169
>gi|384490121|gb|EIE81343.1| hypothetical protein RO3G_06048 [Rhizopus delemar RA 99-880]
Length = 286
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ M+AY F + R KK P +V E S++ +W++M+E E + + EMA++DK
Sbjct: 194 PKHPMSAYLHFAKTMRPIIKKNSPNSKLV--EISQQIGLKWRSMTENEMRPWIEMANEDK 251
Query: 69 KRYDTEM 75
RY EM
Sbjct: 252 ARYAREM 258
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 66 KDKKRYDTE-----MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKY 120
K KK DT M +Y A R IK+++P + +I++++G KW + + +
Sbjct: 184 KKKKSTDTSLPKHPMSAYLHFAKTMRPIIKKNSPNSKLVEISQQIGLKWRSMTENEMRPW 243
Query: 121 EQMAEKDKARYEKEM 135
+MA +DKARY +EM
Sbjct: 244 IEMANEDKARYAREM 258
>gi|346468357|gb|AEO34023.1| hypothetical protein [Amblyomma maculatum]
Length = 734
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYK-NRS 142
E R KIK+DNP + + D+ K G+ W +V + K+K+EQ A + A+Y++ M AY+ + S
Sbjct: 574 ENRDKIKKDNPSFSITDVTKRAGELWKEV--TDKSKWEQQAVEAAAKYKEAMAAYQASLS 631
Query: 143 VAPVNEEADE 152
P N+ DE
Sbjct: 632 NRPQNDSDDE 641
>gi|307105669|gb|EFN53917.1| hypothetical protein CHLNCDRAFT_136125 [Chlorella variabilis]
Length = 101
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY +F R E KK P ++ E K WK +S+KEK+ + + ADKDK
Sbjct: 31 PKRPLSAYMYFASDKRVEMKKSDP--SLSLGEVGKATGAAWKELSDKEKEPYQKKADKDK 88
Query: 69 KRYDTEMQSY 78
RY+ E +Y
Sbjct: 89 ARYEKEKAAY 98
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A +KR ++K+ +P +G++ K G W ++ K Y++ A+KDKARYEKE
Sbjct: 35 LSAYMYFASDKRVEMKKSDPSLSLGEVGKATGAAWKELSDKEKEPYQKKADKDKARYEKE 94
Query: 135 MTAY 138
AY
Sbjct: 95 KAAY 98
>gi|345323380|ref|XP_001507921.2| PREDICTED: transcription factor A, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 320
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 40/174 (22%)
Query: 8 KPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKD 67
+P+ ++AY FV + +K+++PE + E KK A+ W+ + EKK + E A++D
Sbjct: 116 RPKQPLSAYLRFVVQRQSMYKQQNPE--IKMTEVIKKIAQAWRELPAAEKKVYEEAANED 173
Query: 68 KKRYDTEMQSYTPPA------------------------GEKRGKIKQDNPEYGV----- 98
Y E+ + + + G+ K+ + Y +
Sbjct: 174 WMAYKEELAKFKATSVPLQKVPLKTHSKELKSKSERKKELRRLGRPKRPHSAYNIFVVER 233
Query: 99 -----GDIAKE----LGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAYKNRSV 143
G++ K+ L + W ++ S K Y Q+AE DK RYE EM +++++ V
Sbjct: 234 LQETAGNLLKDKIKILSEAWNNLPSSQKQAYIQLAEDDKIRYENEMRSWESQMV 287
>gi|148693919|gb|EDL25866.1| high mobility group 20A, isoform CRA_b [Mus musculus]
Length = 370
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 126 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 183
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 184 ERYMKELEQY 193
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 66 KDKKRYDTEMQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAE 125
+D + + Y E+R +++ PE +I + LG +W+ + P K +Y A+
Sbjct: 121 RDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEAD 180
Query: 126 KDKARYEKEMTAYK 139
+DK RY KE+ Y+
Sbjct: 181 RDKERYMKELEQYQ 194
>gi|74638955|sp|Q9UVL1.1|NHP6_CANAL RecName: Full=Non-histone chromosomal protein 6
gi|6273391|gb|AAF06350.1|AF196333_1 nonhistone protein 6 [Candida albicans]
gi|238881668|gb|EEQ45306.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 92
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ +Y A E R ++ +NP G + K LG+KW ++ K YE AE DK RYEKE
Sbjct: 23 LSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADKKRYEKE 82
Query: 135 MTAYKNRSVA 144
Y ++ A
Sbjct: 83 KAEYAKKNSA 92
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ ++AY FF R+ + ++P + F + K E+WK ++ ++K + A+ DK
Sbjct: 19 PKRSLSAYMFFANENRDIVRAENP--GISFGQVGKLLGEKWKALNSEDKLPYENKAEADK 76
Query: 69 KRYDTEMQSYT 79
KRY+ E Y
Sbjct: 77 KRYEKEKAEYA 87
>gi|145480317|ref|XP_001426181.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393254|emb|CAK58783.1| unnamed protein product [Paramecium tetraurelia]
Length = 167
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 7 VKPRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADK 66
+ P+ +A+ F+ Q RE+ ++++P N+ F E +K A WK + ++ ++ +H+ A K
Sbjct: 52 LAPKMPKSAFIFYFQDKREKFQQQYP--NLQFQEITKLIASEWKDLPKEIQQSYHDQAFK 109
Query: 67 DKKRYDTEMQSYTPPAGEK-RGK 88
D+ RY E + Y G+K +GK
Sbjct: 110 DRSRYSQESELYCTQTGKKFKGK 132
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 84 EKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKEMTAY 138
+KR K +Q P +I K + +W D+ ++ Y A KD++RY +E Y
Sbjct: 67 DKREKFQQQYPNLQFQEITKLIASEWKDLPKEIQQSYHDQAFKDRSRYSQESELY 121
>gi|157822803|ref|NP_001101620.1| high mobility group protein 20A [Rattus norvegicus]
gi|149041741|gb|EDL95582.1| high mobility group 20A (predicted) [Rattus norvegicus]
Length = 347
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 9 PRGRMTAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKTMSEKEKKRFHEMADKDK 68
P+ +T Y F+ RE+ + K PE V F E ++ W + +EK+R+ + AD+DK
Sbjct: 103 PKSPLTGYVRFMNERREQLRAKRPE--VPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 69 KRYDTEMQSY 78
+RY E++ Y
Sbjct: 161 ERYMKELEQY 170
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 75 MQSYTPPAGEKRGKIKQDNPEYGVGDIAKELGKKWADVDPSVKTKYEQMAEKDKARYEKE 134
+ Y E+R +++ PE +I + LG +W+ + P K +Y A++DK RY KE
Sbjct: 107 LTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDKERYMKE 166
Query: 135 MTAYK 139
+ Y+
Sbjct: 167 LEQYQ 171
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.126 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,629,072,034
Number of Sequences: 23463169
Number of extensions: 108797244
Number of successful extensions: 415389
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3633
Number of HSP's successfully gapped in prelim test: 2087
Number of HSP's that attempted gapping in prelim test: 396636
Number of HSP's gapped (non-prelim): 15048
length of query: 156
length of database: 8,064,228,071
effective HSP length: 118
effective length of query: 38
effective length of database: 9,590,541,425
effective search space: 364440574150
effective search space used: 364440574150
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 71 (32.0 bits)