BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3267
(105 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270005614|gb|EFA02062.1| hypothetical protein TcasGA2_TC007692 [Tribolium castaneum]
Length = 557
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/49 (79%), Positives = 40/49 (81%), Gaps = 3/49 (6%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK---SSRIVNPFVG 56
AYAFFVQ CREEHKKKHPEENVVFAEFSKKCAERWK S I F+G
Sbjct: 313 AYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKPPEESYITISFLG 361
>gi|189236107|ref|XP_973934.2| PREDICTED: similar to High mobility group protein DSP1 (Protein
dorsal switch 1) [Tribolium castaneum]
Length = 505
Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/37 (94%), Positives = 36/37 (97%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHPEENVVFAEFSKKCAERWK+
Sbjct: 313 AYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKT 349
>gi|347962987|ref|XP_311155.4| AGAP000005-PA [Anopheles gambiae str. PEST]
gi|333467412|gb|EAA06432.5| AGAP000005-PA [Anopheles gambiae str. PEST]
Length = 457
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEHKKKHPEE V+FAEFS+KCAERWK+
Sbjct: 217 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKT 261
>gi|312378819|gb|EFR25283.1| hypothetical protein AND_09522 [Anopheles darlingi]
Length = 527
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEHKKKHPEE V+FAEFS+KCAERWK+
Sbjct: 268 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKT 312
>gi|193664382|ref|XP_001944154.1| PREDICTED: hypothetical protein LOC100167132 [Acyrthosiphon pisum]
Length = 410
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/37 (89%), Positives = 36/37 (97%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHP+ENV+FAEFSKKCAERWK+
Sbjct: 202 AYAFFVQTCREEHKKKHPDENVIFAEFSKKCAERWKT 238
>gi|332375054|gb|AEE62668.1| unknown [Dendroctonus ponderosae]
Length = 306
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/38 (92%), Positives = 36/38 (94%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHPEENVVFAEFSKKCAERWK+
Sbjct: 124 TAYAFFVQTCREEHKKKHPEENVVFAEFSKKCAERWKT 161
>gi|170056683|ref|XP_001864141.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876428|gb|EDS39811.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 372
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEHKKKHPEE V+FAEFS+KCAERWK+
Sbjct: 138 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKT 182
>gi|242003301|ref|XP_002422686.1| High mobility group protein B2, putative [Pediculus humanus
corporis]
gi|212505508|gb|EEB09948.1| High mobility group protein B2, putative [Pediculus humanus
corporis]
Length = 187
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/46 (78%), Positives = 39/46 (84%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEHKKKHP+ENVVFAEFSKKCAERWK+
Sbjct: 7 DNKPRGRMTAYAFFVQTCREEHKKKHPDENVVFAEFSKKCAERWKT 52
>gi|321478856|gb|EFX89813.1| hypothetical protein DAPPUDRAFT_232871 [Daphnia pulex]
Length = 190
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEHKKKHP+ENVVF+EFSKKCAERWK+
Sbjct: 9 NKPRGRMTAYAFFVQTCREEHKKKHPDENVVFSEFSKKCAERWKT 53
>gi|241122588|ref|XP_002403591.1| DNA-binding protein, putative [Ixodes scapularis]
gi|215493481|gb|EEC03122.1| DNA-binding protein, putative [Ixodes scapularis]
Length = 207
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWK+
Sbjct: 13 AYAFFVQTCREEHKKKHPSENVVFAEFSKKCAERWKT 49
>gi|195448286|ref|XP_002071591.1| GK25058 [Drosophila willistoni]
gi|194167676|gb|EDW82577.1| GK25058 [Drosophila willistoni]
Length = 406
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 193 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 229
>gi|442755991|gb|JAA70155.1| Putative dorsal switch protein 1 [Ixodes ricinus]
Length = 207
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWK+
Sbjct: 13 AYAFFVQTCREEHKKKHPTENVVFAEFSKKCAERWKT 49
>gi|427787117|gb|JAA59010.1| Putative dorsal switch protein 1 [Rhipicephalus pulchellus]
Length = 208
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWK+
Sbjct: 13 AYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKT 49
>gi|157129203|ref|XP_001655323.1| high mobility group B1, putative [Aedes aegypti]
gi|108872320|gb|EAT36545.1| AAEL011380-PA [Aedes aegypti]
Length = 278
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEHKKKHPEE V+FAEFS+KCAERWK+
Sbjct: 38 NKPRGRMTAYAFFVQTCREEHKKKHPEEQVIFAEFSRKCAERWKT 82
>gi|29825377|gb|AAO92280.1| putative HMG-like protein [Dermacentor variabilis]
Length = 208
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWK+
Sbjct: 13 AYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKT 49
>gi|260166759|gb|ACX32991.1| RE09522p [Drosophila melanogaster]
Length = 411
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 203 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 239
>gi|198469582|ref|XP_001355062.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
gi|198146939|gb|EAL32118.2| GA11488 [Drosophila pseudoobscura pseudoobscura]
Length = 393
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 184 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 220
>gi|195393910|ref|XP_002055595.1| GJ19445 [Drosophila virilis]
gi|194150105|gb|EDW65796.1| GJ19445 [Drosophila virilis]
Length = 403
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 192 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 228
>gi|221329973|ref|NP_001138203.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
gi|220901792|gb|ACL82935.1| dorsal switch protein 1, isoform F [Drosophila melanogaster]
Length = 397
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 189 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 225
>gi|195134440|ref|XP_002011645.1| GI10980 [Drosophila mojavensis]
gi|193906768|gb|EDW05635.1| GI10980 [Drosophila mojavensis]
Length = 402
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 189 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 225
>gi|194770156|ref|XP_001967163.1| GF19115 [Drosophila ananassae]
gi|190619283|gb|EDV34807.1| GF19115 [Drosophila ananassae]
Length = 387
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 179 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 215
>gi|325303836|tpg|DAA34592.1| TPA_exp: putative HMG-like protein [Amblyomma variegatum]
Length = 145
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/37 (91%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHP ENVVFAEFSKKCAERWK+
Sbjct: 13 AYAFFVQTCREEHKKKHPNENVVFAEFSKKCAERWKT 49
>gi|195040353|ref|XP_001991052.1| GH12282 [Drosophila grimshawi]
gi|193900810|gb|EDV99676.1| GH12282 [Drosophila grimshawi]
Length = 402
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 191 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 227
>gi|195479189|ref|XP_002100798.1| GE17263 [Drosophila yakuba]
gi|194188322|gb|EDX01906.1| GE17263 [Drosophila yakuba]
Length = 394
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 186 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 222
>gi|312190937|gb|ADQ43367.1| HMGBb [Litopenaeus vannamei]
Length = 206
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 36/37 (97%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKKHP+ENVVF+EFS+KCAERWK+
Sbjct: 17 AYAFFVQTCREEHKKKHPDENVVFSEFSRKCAERWKT 53
>gi|391344136|ref|XP_003746359.1| PREDICTED: high mobility group protein DSP1-like isoform 3
[Metaseiulus occidentalis]
Length = 202
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP ENVVFAEFSKKCAERWK+
Sbjct: 28 AYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKT 64
>gi|551090|gb|AAA50238.1| DNA-binding protein [Drosophila melanogaster]
Length = 393
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 185 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 221
>gi|194893856|ref|XP_001977954.1| GG17955 [Drosophila erecta]
gi|195567092|ref|XP_002107106.1| GD17278 [Drosophila simulans]
gi|190649603|gb|EDV46881.1| GG17955 [Drosophila erecta]
gi|194204505|gb|EDX18081.1| GD17278 [Drosophila simulans]
Length = 393
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 185 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 221
>gi|45551469|ref|NP_727959.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|45447020|gb|AAN09394.2| dorsal switch protein 1, isoform D [Drosophila melanogaster]
gi|327180774|gb|AEA30996.1| RE44118p [Drosophila melanogaster]
Length = 386
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 178 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 214
>gi|24642472|ref|NP_727960.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|24642474|ref|NP_727961.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|24642476|ref|NP_542446.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|16768340|gb|AAL28389.1| GM02110p [Drosophila melanogaster]
gi|22832356|gb|AAN09395.1| dorsal switch protein 1, isoform A [Drosophila melanogaster]
gi|22832357|gb|AAN09396.1| dorsal switch protein 1, isoform B [Drosophila melanogaster]
gi|22832358|gb|AAF48594.2| dorsal switch protein 1, isoform C [Drosophila melanogaster]
gi|220943192|gb|ACL84139.1| Dsp1-PA [synthetic construct]
gi|220953466|gb|ACL89276.1| Dsp1-PA [synthetic construct]
Length = 385
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 177 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 213
>gi|45555716|ref|NP_996485.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
gi|17366497|sp|Q24537.1|HMG2_DROME RecName: Full=High mobility group protein DSP1; AltName:
Full=Protein dorsal switch 1
gi|1150375|emb|CAA61938.1| ssrp2 [Drosophila melanogaster]
gi|45447019|gb|AAS65386.1| dorsal switch protein 1, isoform E [Drosophila melanogaster]
Length = 393
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 185 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 221
>gi|391344132|ref|XP_003746357.1| PREDICTED: high mobility group protein DSP1-like isoform 1
[Metaseiulus occidentalis]
gi|391344134|ref|XP_003746358.1| PREDICTED: high mobility group protein DSP1-like isoform 2
[Metaseiulus occidentalis]
Length = 187
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/37 (89%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP ENVVFAEFSKKCAERWK+
Sbjct: 13 AYAYFVQTCREEHKKKHPNENVVFAEFSKKCAERWKT 49
>gi|587104|emb|CAA57212.1| unnamed protein product [Drosophila melanogaster]
Length = 328
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKKHP+E V+FAEFS+KCAERWK+
Sbjct: 120 AYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKT 156
>gi|307192728|gb|EFN75836.1| High mobility group protein DSP1 [Harpegnathos saltator]
Length = 445
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWK+
Sbjct: 260 AYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKT 296
>gi|328790284|ref|XP_001121384.2| PREDICTED: high mobility group protein DSP1, partial [Apis
mellifera]
Length = 379
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWK+
Sbjct: 236 AYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKT 272
>gi|380025638|ref|XP_003696576.1| PREDICTED: high mobility group protein DSP1-like [Apis florea]
Length = 420
Score = 75.5 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWK+
Sbjct: 236 AYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKT 272
>gi|350402647|ref|XP_003486555.1| PREDICTED: high mobility group protein DSP1-like [Bombus impatiens]
Length = 456
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWK+
Sbjct: 272 AYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKT 308
>gi|156552179|ref|XP_001605958.1| PREDICTED: high mobility group protein DSP1 [Nasonia vitripennis]
Length = 433
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+EHKKKHP+EN+VF EFSKKCA RWK+
Sbjct: 246 AYAFFVQTCRQEHKKKHPDENIVFQEFSKKCALRWKT 282
>gi|221219844|gb|ACM08583.1| High mobility group protein B2 [Salmo salar]
Length = 211
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVN 52
NK + AYAFFVQ CREEHK+KHPE++V FAEFSK+C+ERW++S +
Sbjct: 7 NKPKGKTSAYAFFVQTCREEHKRKHPEQSVNFAEFSKQCSERWRASTATD 56
>gi|443726517|gb|ELU13637.1| hypothetical protein CAPTEDRAFT_158220 [Capitella teleta]
Length = 198
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 35/37 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP E+VVFAEFSKKCAERWK+
Sbjct: 14 SYAFFVQTCREEHKKKHPGESVVFAEFSKKCAERWKT 50
>gi|109076196|ref|XP_001085665.1| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 321
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 121 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 165
>gi|355778495|gb|EHH63531.1| hypothetical protein EGM_16518 [Macaca fascicularis]
Length = 210
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHPE +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKT 51
>gi|355687725|gb|EHH26309.1| hypothetical protein EGK_16239 [Macaca mulatta]
Length = 209
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHPE +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKT 51
>gi|297297620|ref|XP_001106417.2| PREDICTED: high mobility group protein B2-like [Macaca mulatta]
Length = 210
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHPE +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPESSVNFAEFSKKCSERWKT 51
>gi|332025497|gb|EGI65660.1| High mobility group protein DSP1 [Acromyrmex echinatior]
Length = 305
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWK+
Sbjct: 116 TAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKT 153
>gi|403267260|ref|XP_003925762.1| PREDICTED: uncharacterized protein LOC101050525 [Saimiri
boliviensis boliviensis]
Length = 645
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 171 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 207
>gi|291415373|ref|XP_002723927.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 31 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 75
>gi|226372550|gb|ACO51900.1| High mobility group protein B2 [Rana catesbeiana]
Length = 212
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDSSVSFAEFSKKCSERWKT 51
>gi|407263446|ref|XP_003084790.3| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 424
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 23 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 59
>gi|194208319|ref|XP_001498869.2| PREDICTED: high mobility group protein B2-like [Equus caballus]
Length = 210
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKARGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|291414887|ref|XP_002723687.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 209
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|391345046|ref|XP_003746804.1| PREDICTED: high mobility group protein DSP1-like [Metaseiulus
occidentalis]
Length = 186
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+K + AYA+FVQ CREE+KK HP ENVVFAEFSKKCAERWK+
Sbjct: 5 DKPRGRTSAYAYFVQTCREEYKKMHPNENVVFAEFSKKCAERWKT 49
>gi|348566777|ref|XP_003469178.1| PREDICTED: high mobility group protein B2-like [Cavia porcellus]
Length = 211
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|74153177|dbj|BAB27638.3| unnamed protein product [Mus musculus]
Length = 191
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|358337868|dbj|GAA37121.2| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 378
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
AYA FVQV REEH+KKHP ENV+F+EFSKKCAE+WK
Sbjct: 21 AYACFVQVIREEHRKKHPNENVIFSEFSKKCAEKWK 56
>gi|348543652|ref|XP_003459297.1| PREDICTED: high mobility group protein B2-like isoform 2
[Oreochromis niloticus]
Length = 187
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK+
Sbjct: 7 NKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKA 51
>gi|431918327|gb|ELK17554.1| High mobility group protein B2 [Pteropus alecto]
Length = 209
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|426220609|ref|XP_004004507.1| PREDICTED: high mobility group protein B2 [Ovis aries]
Length = 205
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|73993609|ref|XP_543194.2| PREDICTED: high mobility group protein B2 isoform 1 [Canis lupus
familiaris]
gi|301753755|ref|XP_002912713.1| PREDICTED: high mobility group protein B2-like [Ailuropoda
melanoleuca]
gi|410956554|ref|XP_003984907.1| PREDICTED: high mobility group protein B2 [Felis catus]
gi|281338293|gb|EFB13877.1| hypothetical protein PANDA_000462 [Ailuropoda melanoleuca]
Length = 210
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|11321591|ref|NP_002120.1| high mobility group protein B2 [Homo sapiens]
gi|83035095|ref|NP_001032705.1| high mobility group protein B2 [Bos taurus]
gi|194688133|ref|NP_001124160.1| high mobility group protein B2 [Homo sapiens]
gi|194688135|ref|NP_001124161.1| high mobility group protein B2 [Homo sapiens]
gi|332820789|ref|XP_517538.3| PREDICTED: high mobility group protein B2 isoform 2 [Pan
troglodytes]
gi|332820791|ref|XP_003310651.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
troglodytes]
gi|397505874|ref|XP_003823467.1| PREDICTED: high mobility group protein B2 isoform 1 [Pan
paniscus]
gi|397505876|ref|XP_003823468.1| PREDICTED: high mobility group protein B2 isoform 2 [Pan
paniscus]
gi|397505878|ref|XP_003823469.1| PREDICTED: high mobility group protein B2 isoform 3 [Pan
paniscus]
gi|410038949|ref|XP_003950520.1| PREDICTED: high mobility group protein B2 [Pan troglodytes]
gi|123374|sp|P26583.2|HMGB2_HUMAN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|109940084|sp|P40673.3|HMGB2_BOVIN RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|32333|emb|CAA44395.1| HMG-2 [Homo sapiens]
gi|184236|gb|AAA58659.1| high mobility group 2 protein [Homo sapiens]
gi|12654471|gb|AAH01063.1| High-mobility group box 2 [Homo sapiens]
gi|54696426|gb|AAV38585.1| high-mobility group box 2 [Homo sapiens]
gi|61358840|gb|AAX41628.1| high-mobility group box 2 [synthetic construct]
gi|71679685|gb|AAI00020.1| HMGB2 protein [Homo sapiens]
gi|81674324|gb|AAI09756.1| High-mobility group box 2 [Bos taurus]
gi|119625163|gb|EAX04758.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|119625164|gb|EAX04759.1| high-mobility group box 2, isoform CRA_a [Homo sapiens]
gi|123982946|gb|ABM83214.1| high-mobility group box 2 [synthetic construct]
gi|123997623|gb|ABM86413.1| high-mobility group box 2 [synthetic construct]
gi|189053183|dbj|BAG34805.1| unnamed protein product [Homo sapiens]
gi|208966462|dbj|BAG73245.1| high-mobility group box 2 [synthetic construct]
gi|296484972|tpg|DAA27087.1| TPA: high mobility group protein B2 [Bos taurus]
gi|380785663|gb|AFE64707.1| high mobility group protein B2 [Macaca mulatta]
gi|383417929|gb|AFH32178.1| high mobility group protein B2 [Macaca mulatta]
gi|383417931|gb|AFH32179.1| high mobility group protein B2 [Macaca mulatta]
gi|383417933|gb|AFH32180.1| high mobility group protein B2 [Macaca mulatta]
gi|384941858|gb|AFI34534.1| high mobility group protein B2 [Macaca mulatta]
gi|384946750|gb|AFI36980.1| high mobility group protein B2 [Macaca mulatta]
gi|410212048|gb|JAA03243.1| high-mobility group box 2 [Pan troglodytes]
gi|410212050|gb|JAA03244.1| high-mobility group box 2 [Pan troglodytes]
gi|410253758|gb|JAA14846.1| high-mobility group box 2 [Pan troglodytes]
gi|410253760|gb|JAA14847.1| high-mobility group box 2 [Pan troglodytes]
gi|410304294|gb|JAA30747.1| high-mobility group box 2 [Pan troglodytes]
gi|410304296|gb|JAA30748.1| high-mobility group box 2 [Pan troglodytes]
gi|410337391|gb|JAA37642.1| high-mobility group box 2 [Pan troglodytes]
gi|410337393|gb|JAA37643.1| high-mobility group box 2 [Pan troglodytes]
gi|410337395|gb|JAA37644.1| high mobility group box 2 [Pan troglodytes]
gi|440908504|gb|ELR58513.1| High mobility group protein B2 [Bos grunniens mutus]
gi|738688|prf||2001363A high mobility group protein 2
Length = 209
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|383417927|gb|AFH32177.1| high mobility group protein B2 [Macaca mulatta]
Length = 206
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|351701092|gb|EHB04011.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 215
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|296195168|ref|XP_002745261.1| PREDICTED: high mobility group protein B2-like isoform 2
[Callithrix jacchus]
Length = 205
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|291385922|ref|XP_002709517.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
gi|344288245|ref|XP_003415861.1| PREDICTED: high mobility group protein B2-like [Loxodonta
africana]
Length = 210
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|297674678|ref|XP_002815340.1| PREDICTED: high mobility group protein B2 isoform 1 [Pongo
abelii]
gi|297674680|ref|XP_002815341.1| PREDICTED: high mobility group protein B2 isoform 2 [Pongo
abelii]
gi|395735499|ref|XP_003776594.1| PREDICTED: high mobility group protein B2 [Pongo abelii]
gi|402870856|ref|XP_003899415.1| PREDICTED: high mobility group protein B2 isoform 1 [Papio
anubis]
gi|402870858|ref|XP_003899416.1| PREDICTED: high mobility group protein B2 isoform 2 [Papio
anubis]
gi|402871219|ref|XP_003899573.1| PREDICTED: high mobility group protein B2-like [Papio anubis]
gi|90086209|dbj|BAE91657.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|332217748|ref|XP_003258025.1| PREDICTED: high mobility group protein B2 [Nomascus leucogenys]
gi|426346003|ref|XP_004040680.1| PREDICTED: high mobility group protein B2 isoform 1 [Gorilla
gorilla gorilla]
gi|426346005|ref|XP_004040681.1| PREDICTED: high mobility group protein B2 isoform 2 [Gorilla
gorilla gorilla]
gi|426346007|ref|XP_004040682.1| PREDICTED: high mobility group protein B2 isoform 3 [Gorilla
gorilla gorilla]
gi|54696428|gb|AAV38586.1| high-mobility group box 2 [Homo sapiens]
Length = 208
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|74185387|dbj|BAE30167.1| unnamed protein product [Mus musculus]
Length = 181
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|307191141|gb|EFN74839.1| High mobility group protein DSP1 [Camponotus floridanus]
Length = 305
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWK+
Sbjct: 117 TAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKT 154
>gi|283462216|gb|ADB22402.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 241
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
AYAFFVQ CR+EHKK+HP E+VVFAEFSKKCAERWK
Sbjct: 42 AYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWK 77
>gi|6680229|ref|NP_032278.1| high mobility group protein B2 [Mus musculus]
gi|1708259|sp|P30681.3|HMGB2_MOUSE RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|609169|emb|CAA86727.1| high mobility group 2 protein [Mus musculus]
gi|12834643|dbj|BAB22988.1| unnamed protein product [Mus musculus]
gi|12842629|dbj|BAB25672.1| unnamed protein product [Mus musculus]
gi|12849395|dbj|BAB28323.1| unnamed protein product [Mus musculus]
gi|52789313|gb|AAH83108.1| High mobility group box 2 [Mus musculus]
gi|55777186|gb|AAH46759.1| High mobility group box 2 [Mus musculus]
gi|74179666|dbj|BAE22481.1| unnamed protein product [Mus musculus]
gi|74179668|dbj|BAE22482.1| unnamed protein product [Mus musculus]
gi|74226660|dbj|BAE26982.1| unnamed protein product [Mus musculus]
Length = 210
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|11527222|gb|AAG36939.1|AF267733_1 high mobility group protein B2 [Mus musculus]
gi|12805183|gb|AAH02050.1| High mobility group box 2 [Mus musculus]
gi|74150328|dbj|BAE32214.1| unnamed protein product [Mus musculus]
gi|148672860|gb|EDL04807.1| mCG4647 [Mus musculus]
Length = 210
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|432953331|ref|XP_004085353.1| PREDICTED: high mobility group protein B2-like isoform 2 [Oryzias
latipes]
Length = 187
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK+
Sbjct: 7 NKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKA 51
>gi|426251515|ref|XP_004019467.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|426230076|ref|XP_004009107.1| PREDICTED: high mobility group protein B2-like [Ovis aries]
Length = 209
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|291413747|ref|XP_002723128.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ+CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 31 NKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKT 75
>gi|395840000|ref|XP_003792858.1| PREDICTED: high mobility group protein B2 [Otolemur garnettii]
Length = 209
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|8393536|ref|NP_058883.1| high mobility group protein B2 [Rattus norvegicus]
gi|293340790|ref|XP_001063065.2| PREDICTED: high mobility group protein B2-like [Rattus
norvegicus]
gi|293352163|ref|XP_573272.3| PREDICTED: high mobility group protein B2-like [Rattus
norvegicus]
gi|1708260|sp|P52925.2|HMGB2_RAT RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|1304193|dbj|BAA12350.1| HMG2 [Rattus norvegicus]
gi|51259308|gb|AAH78866.1| Hmgb2 protein [Rattus norvegicus]
gi|58476482|gb|AAH89854.1| Hmgb2 protein [Rattus norvegicus]
gi|77567606|gb|AAI07456.1| Hmgb2 protein [Rattus norvegicus]
gi|149032266|gb|EDL87172.1| rCG59188 [Rattus norvegicus]
Length = 210
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|47522942|ref|NP_999228.1| high mobility group protein B2 [Sus scrofa]
gi|123375|sp|P17741.2|HMGB2_PIG RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|164492|gb|AAA31051.1| non-histone protein HMG2 precursor [Sus scrofa]
Length = 210
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|432953329|ref|XP_004085352.1| PREDICTED: high mobility group protein B2-like isoform 1 [Oryzias
latipes]
Length = 200
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK+
Sbjct: 7 NKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKA 51
>gi|291413997|ref|XP_002723251.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ+CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQMCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|47190944|emb|CAF93003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK+
Sbjct: 10 NKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKA 54
>gi|348543650|ref|XP_003459296.1| PREDICTED: high mobility group protein B2-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK+
Sbjct: 7 NKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKA 51
>gi|383858172|ref|XP_003704576.1| PREDICTED: high mobility group protein DSP1-like [Megachile
rotundata]
Length = 433
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+E+KKKHPEE +VF EFSKKCA WK+
Sbjct: 249 AYAFFVQTCRQEYKKKHPEEKIVFREFSKKCAMSWKT 285
>gi|147903143|ref|NP_001079387.1| high mobility group box 2 [Xenopus laevis]
gi|80479234|gb|AAI08500.1| MGC52825 protein [Xenopus laevis]
Length = 211
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|27370889|gb|AAH41262.1| MGC52825 protein [Xenopus laevis]
Length = 212
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|444706336|gb|ELW47678.1| Leiomodin-1 [Tupaia chinensis]
Length = 823
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C+EEH+KKHPE V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCKEEHRKKHPEAPVNFSEFSKKCSERWKT 51
>gi|291415825|ref|XP_002724150.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|410930542|ref|XP_003978657.1| PREDICTED: high mobility group protein B2-like [Takifugu
rubripes]
Length = 201
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK
Sbjct: 7 NKPKGKTSAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKG 51
>gi|392351997|ref|XP_003751090.1| PREDICTED: high mobility group protein B2-like, partial [Rattus
norvegicus]
Length = 154
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|45360483|ref|NP_988904.1| high mobility group box 2 [Xenopus (Silurana) tropicalis]
gi|38181929|gb|AAH61601.1| high-mobility group box 2 [Xenopus (Silurana) tropicalis]
Length = 212
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|322797840|gb|EFZ19748.1| hypothetical protein SINV_09636 [Solenopsis invicta]
Length = 203
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR+EHKKKHPEE +VF EFSKKCA RWK+
Sbjct: 14 TAYAFFVQTCRQEHKKKHPEEKIVFREFSKKCAMRWKT 51
>gi|296317265|ref|NP_001171733.1| dorsal switch-like hmg protein [Saccoglossus kowalevskii]
Length = 215
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/36 (86%), Positives = 34/36 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
AYAFFVQ CR+EHKK+HP E+VVFAEFSKKCAERWK
Sbjct: 16 AYAFFVQSCRQEHKKQHPAESVVFAEFSKKCAERWK 51
>gi|291415754|ref|XP_002724114.1| PREDICTED: high-mobility group box 2-like [Oryctolagus cuniculus]
Length = 234
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ+CREEHKKKHP+ ++ FAEFSKKC+ERWK+
Sbjct: 31 NKPRDKMSSYAFFVQMCREEHKKKHPDSSINFAEFSKKCSERWKT 75
>gi|402875874|ref|XP_003901718.1| PREDICTED: high mobility group protein B2-like, partial [Papio
anubis]
Length = 248
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHK+KHP+ +V FAEFSKKC+ERWK+
Sbjct: 42 NKPRGKMSSYAFFVQTCREEHKEKHPDSSVGFAEFSKKCSERWKT 86
>gi|118343822|ref|NP_001071733.1| transcription factor protein [Ciona intestinalis]
gi|70569841|dbj|BAE06487.1| transcription factor protein [Ciona intestinalis]
Length = 204
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
NK + YA+FVQ CREEHK+KHP E VVFAEFS+KCA+RWK
Sbjct: 8 NKPRGRMTGYAYFVQTCREEHKRKHPNEQVVFAEFSRKCAKRWK 51
>gi|27881711|gb|AAH44715.1| MGC52578 protein [Xenopus laevis]
Length = 212
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWKS
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKS 51
>gi|410955200|ref|XP_003984245.1| PREDICTED: high mobility group protein B2-like [Felis catus]
Length = 329
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|229367676|gb|ACQ58818.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V FAEFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKT 50
>gi|229365968|gb|ACQ57964.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 197
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V FAEFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKT 50
>gi|47198174|emb|CAF88344.1| unnamed protein product [Tetraodon nigroviridis]
Length = 102
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEH+KK+PE++V FAEFSKKC+ERWK+
Sbjct: 7 NKPKGKTFAYAFFVQTCREEHRKKNPEQSVNFAEFSKKCSERWKA 51
>gi|348541671|ref|XP_003458310.1| PREDICTED: high mobility group-T protein-like [Oreochromis
niloticus]
Length = 206
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V FAEFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKT 50
>gi|417397133|gb|JAA45600.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 208
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFSEFSKKCSERWKT 51
>gi|395542387|ref|XP_003773114.1| PREDICTED: high mobility group protein B2 isoform 1 [Sarcophilus
harrisii]
gi|395542389|ref|XP_003773115.1| PREDICTED: high mobility group protein B2 isoform 2 [Sarcophilus
harrisii]
Length = 207
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKT 51
>gi|126331239|ref|XP_001365344.1| PREDICTED: high mobility group protein B2-like [Monodelphis
domestica]
Length = 207
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSPVNFAEFSKKCSERWKT 51
>gi|327268628|ref|XP_003219098.1| PREDICTED: high mobility group protein B2-like [Anolis
carolinensis]
Length = 209
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERW++
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWRT 51
>gi|225708606|gb|ACO10149.1| High mobility group protein B2 [Osmerus mordax]
Length = 216
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP +V F+EFSKKC+ERWK+
Sbjct: 7 NKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKT 51
>gi|303304752|emb|CBD77423.1| high mobility group box 2 protein [Plecoglossus altivelis]
Length = 215
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP +V F+EFSKKC+ERWK+
Sbjct: 7 NKPRGKTSSYAFFVQTCREEHKKKHPGTSVNFSEFSKKCSERWKT 51
>gi|992639|gb|AAB08831.1| high mobility group protein-2 (HMG-2) [Ambystoma mexicanum]
Length = 216
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 51
>gi|335892930|gb|AEH59760.1| high mobility group box 2 [Lethenteron camtschaticum]
Length = 194
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V FAEFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKT 51
>gi|149060359|gb|EDM11073.1| rCG63620 [Rattus norvegicus]
Length = 198
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 39
>gi|407262070|ref|XP_003945989.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|109490746|ref|XP_001074778.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
gi|392351213|ref|XP_003750876.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
Length = 211
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 7 KKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|351698366|gb|EHB01285.1| High mobility group protein B2 [Heterocephalus glaber]
Length = 211
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQNCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|226443200|ref|NP_001140081.1| High mobility group-T protein [Salmo salar]
gi|223649418|gb|ACN11467.1| High mobility group-T protein [Salmo salar]
Length = 345
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 156 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 192
>gi|62660600|ref|XP_573625.1| PREDICTED: high mobility group protein B2-like [Rattus
norvegicus]
gi|392333089|ref|XP_003752789.1| PREDICTED: high mobility group protein B2-like [Rattus
norvegicus]
Length = 209
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + YAFFVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSLYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|449270893|gb|EMC81539.1| High mobility group protein B2 [Columba livia]
Length = 207
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V FAEFS+KC+ERWK+
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKT 51
>gi|45382755|ref|NP_990817.1| high mobility group protein B2 [Gallus gallus]
gi|123373|sp|P26584.2|HMGB2_CHICK RecName: Full=High mobility group protein B2; AltName: Full=High
mobility group protein 2; Short=HMG-2
gi|211927|gb|AAA48818.1| non-histone chromosomal protein [Gallus gallus]
Length = 207
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V FAEFS+KC+ERWK+
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKT 51
>gi|82952271|ref|XP_889413.1| PREDICTED: high mobility group protein B1-like isoform 2 [Mus
musculus]
gi|407263905|ref|XP_003945567.1| PREDICTED: high mobility group protein B1-like isoform 1 [Mus
musculus]
Length = 215
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|296200444|ref|XP_002747606.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 210
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 7 KKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|32527711|gb|AAP86257.1| Ac2-008 [Rattus norvegicus]
Length = 234
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 10/56 (17%)
Query: 2 QNKLNM----------QGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+N+LNM + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 124 ENQLNMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 179
>gi|291395415|ref|XP_002714100.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 210
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ ++ FAEFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDSSINFAEFSKKCSERWKT 51
>gi|301757910|ref|XP_002914802.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 215
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|148682424|gb|EDL14371.1| mCG8587 [Mus musculus]
Length = 130
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|395850201|ref|XP_003797684.1| PREDICTED: high mobility group protein B1 [Otolemur garnettii]
Length = 289
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|148668459|gb|EDL00778.1| mCG116117 [Mus musculus]
Length = 244
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|432895946|ref|XP_004076239.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 206
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 50
>gi|148922135|gb|AAI46745.1| Zgc:165618 protein [Danio rerio]
Length = 165
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|410910284|ref|XP_003968620.1| PREDICTED: high mobility group-T protein-like isoform 2 [Takifugu
rubripes]
Length = 184
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 50
>gi|355562304|gb|EHH18898.1| hypothetical protein EGK_19468, partial [Macaca mulatta]
Length = 159
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 45/84 (53%), Gaps = 27/84 (32%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAPVFLTFLSRM 70
AYAFFVQ CREEHKKK+PE +V FAEFSKKC+ERWK T +
Sbjct: 15 AYAFFVQTCREEHKKKNPEVSVNFAEFSKKCSERWK------------------TMPGKE 56
Query: 71 KDSILFC---------VNPVLAVG 85
K LFC NP +++G
Sbjct: 57 KSKFLFCSEFRPKIKSTNPGISIG 80
>gi|392340368|ref|XP_003754052.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
gi|392347889|ref|XP_003749961.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
Length = 215
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|281350894|gb|EFB26478.1| hypothetical protein PANDA_002732 [Ailuropoda melanoleuca]
Length = 157
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|62638360|ref|XP_574279.1| PREDICTED: high mobility group protein B2-like [Rattus
norvegicus]
gi|109460525|ref|XP_001074365.1| PREDICTED: high mobility group protein B2-like [Rattus
norvegicus]
Length = 209
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHK KHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKNKHPDSSVNFAEFSKKCSERWKT 51
>gi|148223673|ref|NP_001079576.1| HMG-X protein [Xenopus laevis]
gi|639691|dbj|BAA06440.1| HMG-X protein [Xenopus laevis]
Length = 212
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ CREEHKKKHP+ +V F++FSKKC+ERWKS
Sbjct: 7 NKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSDFSKKCSERWKS 51
>gi|326918606|ref|XP_003205579.1| PREDICTED: high mobility group protein B2-like [Meleagris
gallopavo]
Length = 246
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFS+KC+ERWK+
Sbjct: 53 SYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKT 89
>gi|62087576|dbj|BAD92235.1| high-mobility group box 1 variant [Homo sapiens]
Length = 176
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 17 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 53
>gi|444725503|gb|ELW66067.1| Trem-like transcript 1 protein [Tupaia chinensis]
Length = 668
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AY FFVQ CRE+HKKK+PE V FAEFSKKC+ERWK+
Sbjct: 512 AYTFFVQTCREKHKKKNPEVPVNFAEFSKKCSERWKT 548
>gi|37779034|gb|AAP20177.1| high mobility group protein [Pagrus major]
Length = 200
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V FAEFSK+C+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFAEFSKRCSERWKT 50
>gi|339715208|ref|NP_001092721.2| high-mobility group box 1b [Danio rerio]
Length = 197
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|355700906|gb|EHH28927.1| hypothetical protein EGK_09214, partial [Macaca mulatta]
Length = 263
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|221045048|dbj|BAH14201.1| unnamed protein product [Homo sapiens]
Length = 174
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|148238271|ref|NP_001081794.1| high mobility group protein-1 [Xenopus laevis]
gi|709959|gb|AAC59859.1| high mobility group protein-1 [Xenopus laevis]
Length = 210
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 51
>gi|309265997|ref|XP_003086707.1| PREDICTED: uncharacterized protein LOC667284 [Mus musculus]
Length = 433
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFF+Q CR+EHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 13 SYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKT 49
>gi|49115548|gb|AAH73449.1| HMG-1 protein [Xenopus laevis]
Length = 210
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 51
>gi|410910282|ref|XP_003968619.1| PREDICTED: high mobility group-T protein-like isoform 1 [Takifugu
rubripes]
Length = 196
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 50
>gi|223646906|gb|ACN10211.1| High mobility group-T protein [Salmo salar]
gi|223672769|gb|ACN12566.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|47227840|emb|CAG09003.1| unnamed protein product [Tetraodon nigroviridis]
Length = 199
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 50
>gi|403255365|ref|XP_003920409.1| PREDICTED: high mobility group protein B1-like, partial [Saimiri
boliviensis boliviensis]
Length = 159
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|609551|gb|AAA58771.1| HMG-1 [Oncorhynchus mykiss]
Length = 204
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|45361297|ref|NP_989226.1| high mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|38969943|gb|AAH63332.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89267209|emb|CAJ81415.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
gi|89272910|emb|CAJ82928.1| high-mobility group box 1 [Xenopus (Silurana) tropicalis]
Length = 211
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 51
>gi|221220042|gb|ACM08682.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|260806967|ref|XP_002598355.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
gi|229283627|gb|EEN54367.1| hypothetical protein BRAFLDRAFT_57556 [Branchiostoma floridae]
Length = 223
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAP 61
+NK + AYA FVQ CR+EH+KK+P++ VVF EFSKKCAERWK+ +N ++F
Sbjct: 6 KNKPKGKMSAYACFVQECRKEHEKKYPDKQVVFTEFSKKCAERWKT---MNDGEKKRFQD 62
Query: 62 VFLTFLSRMKDSILFCVNPVLAVGSRILEK 91
+ T R + + V P A G R K
Sbjct: 63 LAETDKRRYEREMAKYVPPKGAEGGRRKRK 92
>gi|354468511|ref|XP_003496696.1| PREDICTED: high mobility group protein B1-like [Cricetulus
griseus]
gi|344237248|gb|EGV93351.1| High mobility group protein B1 [Cricetulus griseus]
Length = 220
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|440900657|gb|ELR51738.1| High mobility group protein B1 [Bos grunniens mutus]
Length = 224
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|426244704|ref|XP_004016160.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 203
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|83014391|ref|XP_918585.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 213
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|346986304|ref|NP_001069753.2| high mobility group protein B3 isoform 1 [Bos taurus]
Length = 274
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 89 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 125
>gi|426236473|ref|XP_004012193.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|109098276|ref|XP_001102554.1| PREDICTED: high mobility group protein B1-like [Macaca mulatta]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|26350077|dbj|BAC38678.1| unnamed protein product [Mus musculus]
Length = 181
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|28279681|gb|AAH45917.1| High-mobility group box 1 [Danio rerio]
gi|182891806|gb|AAI65307.1| Hmgb1 protein [Danio rerio]
Length = 205
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKT 50
>gi|42476233|ref|NP_955849.2| high mobility group protein B1 [Danio rerio]
gi|37681827|gb|AAQ97791.1| high-mobility group box 1 [Danio rerio]
gi|45595607|gb|AAH67193.1| High-mobility group box 1 [Danio rerio]
Length = 205
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKT 50
>gi|74138677|dbj|BAE27155.1| unnamed protein product [Mus musculus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|417397281|gb|JAA45674.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 216
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|403267258|ref|XP_003925761.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Saimiri boliviensis boliviensis]
Length = 227
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 68 AYAFFVQTCREEHKKKNPEVPVSFAEFSKKCSERWKT 104
>gi|148234528|ref|NP_001080836.1| high mobility group box 1 [Xenopus laevis]
gi|32450384|gb|AAH54148.1| Hmgb1-prov protein [Xenopus laevis]
Length = 211
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKT 51
>gi|126327421|ref|XP_001367294.1| PREDICTED: high mobility group protein B1-like isoform 2
[Monodelphis domestica]
Length = 216
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|148709727|gb|EDL41673.1| mCG9102 [Mus musculus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|395520861|ref|XP_003764541.1| PREDICTED: high mobility group protein B1 [Sarcophilus harrisii]
Length = 230
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 29 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 65
>gi|296224352|ref|XP_002758030.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390474708|ref|XP_003734829.1| PREDICTED: high mobility group protein B1-like isoform 2
[Callithrix jacchus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|291410693|ref|XP_002721624.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|478813|pir||S29857 nonhistone chromosomal protein HMG-1 - human
gi|184251|gb|AAA64970.1| HMG-1 [Homo sapiens]
Length = 216
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|332863449|ref|XP_001169802.2| PREDICTED: high mobility group protein B1-like, partial [Pan
troglodytes]
Length = 174
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|390463605|ref|XP_003733066.1| PREDICTED: high mobility group protein B1-like [Callithrix
jacchus]
Length = 214
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|119584724|gb|EAW64320.1| hCG26831 [Homo sapiens]
Length = 212
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|157820087|ref|NP_001102843.1| high mobility group box 1 like [Rattus norvegicus]
gi|149043247|gb|EDL96779.1| rCG50935 [Rattus norvegicus]
Length = 214
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|26342222|dbj|BAC34773.1| unnamed protein product [Mus musculus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|432951224|ref|XP_004084757.1| PREDICTED: high mobility group protein B2-like [Oryzias latipes]
Length = 221
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYA+FV CREEHKKKHP +V FAEFSKKC+ERWK+
Sbjct: 29 NKPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKT 73
>gi|30584163|gb|AAP36330.1| Homo sapiens high-mobility group box 1 [synthetic construct]
gi|54697182|gb|AAV38963.1| high-mobility group box 1 [synthetic construct]
gi|54697184|gb|AAV38964.1| high-mobility group box 1 [synthetic construct]
gi|61367269|gb|AAX42974.1| high-mobility group box 1 [synthetic construct]
gi|61367275|gb|AAX42975.1| high-mobility group box 1 [synthetic construct]
gi|61371572|gb|AAX43692.1| high-mobility group box 1 [synthetic construct]
Length = 216
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|380793129|gb|AFE68440.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|380793127|gb|AFE68439.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 195
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|119628863|gb|EAX08458.1| high-mobility group box 1, isoform CRA_b [Homo sapiens]
Length = 206
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|26341410|dbj|BAC34367.1| unnamed protein product [Mus musculus]
Length = 178
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|431920962|gb|ELK18731.1| High mobility group protein B1 [Pteropus alecto]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|55639639|ref|XP_509611.1| PREDICTED: high mobility group protein B1 isoform 15 [Pan
troglodytes]
gi|114649261|ref|XP_001140156.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
troglodytes]
gi|114649265|ref|XP_001140328.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
troglodytes]
gi|114649269|ref|XP_001140491.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
troglodytes]
gi|332841128|ref|XP_003314147.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|332841133|ref|XP_003314149.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|397513185|ref|XP_003826902.1| PREDICTED: high mobility group protein B1 isoform 1 [Pan
paniscus]
gi|397513187|ref|XP_003826903.1| PREDICTED: high mobility group protein B1 isoform 2 [Pan
paniscus]
gi|397513189|ref|XP_003826904.1| PREDICTED: high mobility group protein B1 isoform 3 [Pan
paniscus]
gi|397513191|ref|XP_003826905.1| PREDICTED: high mobility group protein B1 isoform 4 [Pan
paniscus]
gi|397513193|ref|XP_003826906.1| PREDICTED: high mobility group protein B1 isoform 5 [Pan
paniscus]
gi|397513195|ref|XP_003826907.1| PREDICTED: high mobility group protein B1 isoform 6 [Pan
paniscus]
gi|397513197|ref|XP_003826908.1| PREDICTED: high mobility group protein B1 isoform 7 [Pan
paniscus]
gi|410047671|ref|XP_003952424.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047673|ref|XP_003952425.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047675|ref|XP_003952426.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047677|ref|XP_003952427.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047679|ref|XP_003952428.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047682|ref|XP_003952429.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047686|ref|XP_003952430.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
gi|410047688|ref|XP_003952431.1| PREDICTED: high mobility group protein B1 [Pan troglodytes]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|48145843|emb|CAG33144.1| HMGB1 [Homo sapiens]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|620098|emb|CAA56631.1| high mobility group protein [Mus musculus]
gi|71681313|gb|AAI00313.1| High mobility group box 1 [Mus musculus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|4504425|ref|NP_002119.1| high mobility group protein B1 [Homo sapiens]
gi|50950133|ref|NP_001002937.1| high mobility group protein B1 [Canis lupus familiaris]
gi|126352708|ref|NP_001075304.1| high mobility group protein B1 [Equus caballus]
gi|281182655|ref|NP_001162380.1| high mobility group protein B1 [Papio anubis]
gi|284005385|ref|NP_001164752.1| high mobility group protein B1 [Oryctolagus cuniculus]
gi|388453289|ref|NP_001252735.1| high mobility group protein B1 [Macaca mulatta]
gi|291397530|ref|XP_002715999.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|291399645|ref|XP_002716268.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
gi|296203653|ref|XP_002748994.1| PREDICTED: high mobility group protein B1 isoform 2 [Callithrix
jacchus]
gi|297714815|ref|XP_002833818.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
gi|332242218|ref|XP_003270282.1| PREDICTED: high mobility group protein B1-like isoform 1
[Nomascus leucogenys]
gi|332242222|ref|XP_003270284.1| PREDICTED: high mobility group protein B1-like isoform 3
[Nomascus leucogenys]
gi|332242226|ref|XP_003270286.1| PREDICTED: high mobility group protein B1-like isoform 5
[Nomascus leucogenys]
gi|332242228|ref|XP_003270287.1| PREDICTED: high mobility group protein B1-like isoform 6
[Nomascus leucogenys]
gi|332242230|ref|XP_003270288.1| PREDICTED: high mobility group protein B1-like isoform 7
[Nomascus leucogenys]
gi|332242232|ref|XP_003270289.1| PREDICTED: high mobility group protein B1-like isoform 8
[Nomascus leucogenys]
gi|344284506|ref|XP_003414007.1| PREDICTED: high mobility group protein B1-like [Loxodonta
africana]
gi|348583405|ref|XP_003477463.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
gi|426375079|ref|XP_004054375.1| PREDICTED: high mobility group protein B1-like isoform 1 [Gorilla
gorilla gorilla]
gi|426375081|ref|XP_004054376.1| PREDICTED: high mobility group protein B1-like isoform 2 [Gorilla
gorilla gorilla]
gi|426375083|ref|XP_004054377.1| PREDICTED: high mobility group protein B1-like isoform 3 [Gorilla
gorilla gorilla]
gi|426375085|ref|XP_004054378.1| PREDICTED: high mobility group protein B1-like isoform 4 [Gorilla
gorilla gorilla]
gi|426375087|ref|XP_004054379.1| PREDICTED: high mobility group protein B1-like isoform 5 [Gorilla
gorilla gorilla]
gi|426375089|ref|XP_004054380.1| PREDICTED: high mobility group protein B1-like isoform 6 [Gorilla
gorilla gorilla]
gi|426375091|ref|XP_004054381.1| PREDICTED: high mobility group protein B1-like isoform 7 [Gorilla
gorilla gorilla]
gi|426375093|ref|XP_004054382.1| PREDICTED: high mobility group protein B1-like isoform 8 [Gorilla
gorilla gorilla]
gi|441624073|ref|XP_004088962.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624077|ref|XP_004088963.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624084|ref|XP_004088964.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624090|ref|XP_004088965.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|441624094|ref|XP_004088966.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
gi|123369|sp|P09429.3|HMGB1_HUMAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|61213476|sp|Q6YKA4.3|HMGB1_CANFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|75076928|sp|Q4R844.3|HMGB1_MACFA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|119370722|sp|Q08IE6.3|HMGB1_HORSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028296|sp|B0CM99.1|HMGB1_CALJA RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028297|sp|B1MTB0.1|HMGB1_CALMO RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|189028298|sp|A9RA84.1|HMGB1_PAPAN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|32327|emb|CAA31110.1| unnamed protein product [Homo sapiens]
gi|1435197|gb|AAB08987.1| non-histone chromatin protein HMG1 [Homo sapiens]
gi|13097234|gb|AAH03378.1| High-mobility group box 1 [Homo sapiens]
gi|21410205|gb|AAH30981.1| High-mobility group box 1 [Homo sapiens]
gi|30582719|gb|AAP35586.1| high-mobility group box 1 [Homo sapiens]
gi|37380997|gb|AAQ91389.1| high mobility group protein 1 [Homo sapiens]
gi|37548602|gb|AAN11296.1| high mobility group protein B1 [Canis lupus familiaris]
gi|37722533|gb|AAN11319.1| high mobility group B1 protein [Canis lupus familiaris]
gi|44890726|gb|AAH66889.1| High-mobility group box 1 [Homo sapiens]
gi|45709178|gb|AAH67732.1| High-mobility group box 1 [Homo sapiens]
gi|51476884|emb|CAH18408.1| hypothetical protein [Homo sapiens]
gi|54697178|gb|AAV38961.1| high-mobility group box 1 [Homo sapiens]
gi|60654989|gb|AAX32058.1| high mobility group box 1 [synthetic construct]
gi|61357252|gb|AAX41359.1| high-mobility group box 1 [synthetic construct]
gi|67968740|dbj|BAE00728.1| unnamed protein product [Macaca fascicularis]
gi|115354285|dbj|BAF33339.1| high-mobility group box 1 [Equus caballus]
gi|119628862|gb|EAX08457.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628864|gb|EAX08459.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628865|gb|EAX08460.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628866|gb|EAX08461.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|119628867|gb|EAX08462.1| high-mobility group box 1, isoform CRA_a [Homo sapiens]
gi|121073803|gb|ABM47301.1| high mobility group box 1 protein [Homo sapiens]
gi|152112978|gb|ABS29271.1| high-mobility group box 1 [Homo sapiens]
gi|158256420|dbj|BAF84183.1| unnamed protein product [Homo sapiens]
gi|162415900|gb|ABX89266.1| high-mobility group box 1 (predicted) [Papio anubis]
gi|165934066|gb|ABY74560.1| high-mobility group box 1 (predicted) [Callithrix jacchus]
gi|169402702|gb|ACA53510.1| high-mobility group box 1 (predicted) [Callicebus moloch]
gi|183396417|gb|ACC62098.1| high-mobility group box 1 (predicted) [Rhinolophus ferrumequinum]
gi|193783763|dbj|BAG53745.1| unnamed protein product [Homo sapiens]
gi|196050399|gb|ACG64310.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
gi|216397586|gb|ACJ72830.1| high-mobility group box 1 (predicted) [Oryctolagus cuniculus]
gi|261858262|dbj|BAI45653.1| high-mobility group box 1 [synthetic construct]
gi|335775462|gb|AEH58580.1| high mobility group protein B1-like protein [Equus caballus]
gi|351700460|gb|EHB03379.1| High mobility group protein B1 [Heterocephalus glaber]
gi|387542840|gb|AFJ72047.1| high mobility group protein B1 [Macaca mulatta]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|402854944|ref|XP_003892110.1| PREDICTED: high mobility group protein B1-like isoform 1 [Papio
anubis]
gi|402854946|ref|XP_003892111.1| PREDICTED: high mobility group protein B1-like isoform 2 [Papio
anubis]
Length = 214
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|397495503|ref|XP_003818592.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 209
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|348551709|ref|XP_003461672.1| PREDICTED: high mobility group protein B1-like [Cavia porcellus]
Length = 214
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|190195542|gb|ACE73639.1| high-mobility group box 1 (predicted) [Sorex araneus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|109510563|ref|XP_001059688.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
gi|392343404|ref|XP_003754879.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
Length = 213
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|41386729|ref|NP_788785.1| high mobility group protein B1 [Bos taurus]
gi|410947173|ref|XP_003980327.1| PREDICTED: high mobility group protein B1 [Felis catus]
gi|123367|sp|P10103.3|HMGB1_BOVIN RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|417|emb|CAA31284.1| unnamed protein product [Bos taurus]
gi|73586656|gb|AAI02930.1| HMGB1 protein [Bos taurus]
gi|146231904|gb|ABQ13027.1| high-mobility group box 1 [Bos taurus]
gi|296481787|tpg|DAA23902.1| TPA: high mobility group protein B1 [Bos taurus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|6754208|ref|NP_034569.1| high mobility group protein B1 [Mus musculus]
gi|6981026|ref|NP_037095.1| high mobility group protein B1 [Rattus norvegicus]
gi|407262920|ref|XP_003945388.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
gi|52783618|sp|P63159.2|HMGB1_RAT RecName: Full=High mobility group protein B1; AltName:
Full=Amphoterin; AltName: Full=Heparin-binding protein
p30; AltName: Full=High mobility group protein 1;
Short=HMG-1
gi|52783747|sp|P63158.2|HMGB1_MOUSE RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|9082303|gb|AAF82799.1|AF275734_1 amphoterin [Rattus norvegicus]
gi|53382|emb|CAA78042.1| non-histone chromosomal high-mobility group 1 protein [Mus
musculus]
gi|56365|emb|CAA68526.1| unnamed protein product [Rattus norvegicus]
gi|202885|gb|AAA40729.1| Amphoterin [Rattus norvegicus]
gi|208488|gb|AAA73006.1| high mobility group 1 protein [synthetic construct]
gi|437102|gb|AAA20508.1| HMG-1 [Mus musculus]
gi|13879238|gb|AAH06586.1| High mobility group box 1 [Mus musculus]
gi|14250281|gb|AAH08565.1| High mobility group box 1 [Mus musculus]
gi|26332344|dbj|BAC29902.1| unnamed protein product [Mus musculus]
gi|26351305|dbj|BAC39289.1| unnamed protein product [Mus musculus]
gi|38512146|gb|AAH61779.1| High mobility group box 1 [Rattus norvegicus]
gi|51859468|gb|AAH81839.1| High mobility group box 1 [Rattus norvegicus]
gi|52789475|gb|AAH83067.1| High mobility group box 1 [Mus musculus]
gi|54648288|gb|AAH85090.1| High mobility group box 1 [Mus musculus]
gi|56788766|gb|AAH88402.1| High mobility group box 1 [Rattus norvegicus]
gi|61403558|gb|AAH91741.1| High mobility group box 1 [Mus musculus]
gi|62739258|gb|AAH94030.1| High mobility group box 1 [Mus musculus]
gi|74186113|dbj|BAE34226.1| unnamed protein product [Mus musculus]
gi|84040262|gb|AAI10668.1| Hmgb1 protein [Mus musculus]
gi|84105496|gb|AAI11469.1| High mobility group box 1 [Mus musculus]
gi|149034811|gb|EDL89531.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034812|gb|EDL89532.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|149034813|gb|EDL89533.1| rCG42800, isoform CRA_a [Rattus norvegicus]
gi|195539712|gb|AAI68143.1| High mobility group box 1 [Rattus norvegicus]
Length = 215
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|431920081|gb|ELK18129.1| High mobility group protein B3 [Pteropus alecto]
Length = 255
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 67 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 103
>gi|5764680|gb|AAC27653.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|392340076|ref|XP_003753981.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein C-like 1-like [Rattus norvegicus]
gi|392347426|ref|XP_003749828.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein C-like 1-like [Rattus norvegicus]
Length = 484
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +Y FFVQ C+EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKIWSYTFFVQTCQEEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|355694838|gb|AER99802.1| high-mobility group box 2 [Mustela putorius furo]
Length = 100
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CR EHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 8 NKPRGKMSSYAFFVQTCRGEHKKKHPDSSVNFAEFSKKCSERWKT 52
>gi|300677968|gb|ADK27291.1| high-mobility-group B1b [Gekko japonicus]
Length = 215
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|229368114|gb|ACQ59037.1| High mobility group protein B1 [Anoplopoma fimbria]
Length = 206
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|334323271|ref|XP_003340370.1| PREDICTED: high mobility group protein B1-like [Monodelphis
domestica]
Length = 216
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|296227498|ref|XP_002759405.1| PREDICTED: high mobility group protein B1-like [Callithrix
jacchus]
Length = 215
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|225706046|gb|ACO08869.1| High mobility group-T protein [Osmerus mordax]
Length = 204
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|968888|dbj|BAA09924.1| HMG-1 [Homo sapiens]
Length = 215
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|402865885|ref|XP_003897133.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 221
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|40352857|gb|AAH64790.1| Hmgb1 protein [Mus musculus]
Length = 215
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|600761|gb|AAA57042.1| high mobility group 1 protein [Mus musculus]
Length = 215
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|353351504|emb|CBX36444.1| high-mobility-group-1 protein [Plecoglossus altivelis]
Length = 204
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|426236471|ref|XP_004012192.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 213
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|56788496|gb|AAW29969.1| unknown [Sus scrofa]
gi|56792880|gb|AAW30632.1| unknown [Sus scrofa]
Length = 193
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|444729709|gb|ELW70116.1| High mobility group protein B1 [Tupaia chinensis]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|392337480|ref|XP_003753270.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
gi|392343959|ref|XP_003748829.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|380792505|gb|AFE68128.1| high mobility group protein B1, partial [Macaca mulatta]
Length = 183
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|149691739|ref|XP_001488130.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 212
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|146218567|gb|AAI40014.1| High-mobility group box 1 [synthetic construct]
gi|146218571|gb|AAI40019.1| High-mobility group box 1 [synthetic construct]
gi|146327050|gb|AAI41845.1| High-mobility group box 1 [Homo sapiens]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|148673911|gb|EDL05858.1| mCG144566 [Mus musculus]
Length = 240
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 10/56 (17%)
Query: 2 QNKLNM----------QGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+N+LNM + +YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 21 ENQLNMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 76
>gi|392352276|ref|XP_003751165.1| PREDICTED: high mobility group protein B1 [Rattus norvegicus]
Length = 187
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|449269673|gb|EMC80424.1| High mobility group protein B1 [Columba livia]
Length = 209
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|225195621|gb|ACN82088.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE V F+EFSKKC+ERWK+
Sbjct: 3 SYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKT 39
>gi|224043266|ref|XP_002194652.1| PREDICTED: high mobility group protein B1 [Taeniopygia guttata]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|5764678|gb|AAC27650.2| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|51592117|ref|NP_001004034.1| high mobility group protein B1 [Sus scrofa]
gi|123371|sp|P12682.3|HMGB1_PIG RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|164490|gb|AAA31050.1| non-histone protein HMG1 [Sus scrofa]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|5815432|gb|AAD52670.1|AF178849_1 high mobility group protein HMG1 [Gallus gallus]
Length = 214
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|380083124|gb|AFD33645.1| high mobility group box 1, partial [Gallus gallus]
Length = 185
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|45382473|ref|NP_990233.1| high mobility group protein B1 [Gallus gallus]
gi|326914268|ref|XP_003203448.1| PREDICTED: high mobility group protein B1-like [Meleagris
gallopavo]
gi|4140289|emb|CAA76978.1| high mobility group 1 protein [Gallus gallus]
gi|60098903|emb|CAH65282.1| hypothetical protein RCJMB04_15a21 [Gallus gallus]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|432102789|gb|ELK30264.1| High mobility group protein B1 [Myotis davidii]
Length = 245
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|148680486|gb|EDL12433.1| mCG1219 [Mus musculus]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|225195617|gb|ACN82086.1| high-mobility group box 1 [Carassius auratus]
gi|225195619|gb|ACN82087.1| high-mobility group box 1 [Megalobrama amblycephala]
gi|225195623|gb|ACN82089.1| high-mobility group box 1 [Carassius auratus x Megalobrama
amblycephala]
Length = 193
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE V F+EFSKKC+ERWK+
Sbjct: 3 SYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKT 39
>gi|444732719|gb|ELW72994.1| High mobility group protein B1 [Tupaia chinensis]
Length = 289
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|444722008|gb|ELW62714.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|432117313|gb|ELK37700.1| Putative high mobility group protein B3-like protein [Myotis
davidii]
Length = 147
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVSFAEFSKKCSERWKT 51
>gi|410057418|ref|XP_003954213.1| PREDICTED: high mobility group protein B1-like [Pan troglodytes]
Length = 210
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|148673204|gb|EDL05151.1| mCG5336 [Mus musculus]
Length = 216
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|148697258|gb|EDL29205.1| mCG50622 [Mus musculus]
Length = 102
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|296202119|ref|XP_002748265.1| PREDICTED: high mobility group protein B1-like isoform 1
[Callithrix jacchus]
gi|390463329|ref|XP_003733013.1| PREDICTED: high mobility group protein B1-like [Callithrix
jacchus]
Length = 214
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|167744990|pdb|2YRQ|A Chain A, Solution Structure Of The Tandem Hmg Box Domain From
Human High Mobility Group Protein B1
Length = 173
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 22 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 58
>gi|300677966|gb|ADK27290.1| high-mobility-group B1a [Gekko japonicus]
Length = 215
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|444707034|gb|ELW48343.1| High mobility group protein B1 [Tupaia chinensis]
Length = 203
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 39
>gi|444516994|gb|ELV11325.1| High mobility group protein B1 [Tupaia chinensis]
Length = 201
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 39
>gi|149030113|gb|EDL85190.1| rCG63106 [Rattus norvegicus]
Length = 201
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 39
>gi|109469081|ref|XP_001074673.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
gi|293346414|ref|XP_002726304.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
gi|392346830|ref|XP_003749644.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
Length = 213
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKA 51
>gi|348525340|ref|XP_003450180.1| PREDICTED: high mobility group-T protein-like isoform 2
[Oreochromis niloticus]
Length = 184
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 50
>gi|355754606|gb|EHH58507.1| hypothetical protein EGM_08375 [Macaca fascicularis]
Length = 263
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|149726074|ref|XP_001503141.1| PREDICTED: high mobility group protein B1-like [Equus caballus]
Length = 215
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|354470970|ref|XP_003497717.1| PREDICTED: high mobility group protein B1-like [Cricetulus
griseus]
Length = 215
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|90076282|dbj|BAE87821.1| unnamed protein product [Macaca fascicularis]
Length = 123
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|440910877|gb|ELR60625.1| High mobility group protein B3 [Bos grunniens mutus]
Length = 236
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 51 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 87
>gi|345307490|ref|XP_001507075.2| PREDICTED: high mobility group protein B2-like [Ornithorhynchus
anatinus]
Length = 141
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
NK + +YAFFVQ CREEHKKKHP+ V FA+FS+KC+ERWK
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKKKHPDSLVNFADFSRKCSERWK 50
>gi|312190935|gb|ADQ43366.1| HMGBa [Litopenaeus vannamei]
Length = 222
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CR EHKK HP+ENV FAEFS++C+ERWK+
Sbjct: 19 TAYAFFVQTCRTEHKKLHPDENVQFAEFSRQCSERWKT 56
>gi|148701926|gb|EDL33873.1| mCG1037808 [Mus musculus]
Length = 72
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + YAFFVQ+CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSLYAFFVQICREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|226372116|gb|ACO51683.1| High mobility group protein B1 [Rana catesbeiana]
Length = 61
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ERWK
Sbjct: 15 SYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWK 50
>gi|50513251|pdb|1J3X|A Chain A, Solution Structure Of The N-Terminal Domain Of The Hmgb2
Length = 77
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ REEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTSREEHKKKHPDSSVNFAEFSKKCSERWKT 51
>gi|410562530|pdb|2LY4|A Chain A, Hmgb1-Facilitated P53 Dna Binding Occurs Via Hmg-BoxP53
Transactivation Domain Interaction And Is Regulated By
The Acidic Tail
Length = 83
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 14 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 50
>gi|348538096|ref|XP_003456528.1| PREDICTED: high mobility group protein B2-like [Oreochromis
niloticus]
Length = 196
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFV CREEHKKKHP +V FAEFSKKC+ERWK+
Sbjct: 6 NKPRGKTSSYAFFVATCREEHKKKHPGTSVNFAEFSKKCSERWKT 50
>gi|395844161|ref|XP_003794831.1| PREDICTED: uncharacterized protein LOC100953571 [Otolemur
garnettii]
Length = 357
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSS 48
AYAFFVQ CREEHKKK+PE V AEFSKKC+ERWK++
Sbjct: 182 AYAFFVQTCREEHKKKNPEVPVNLAEFSKKCSERWKAT 219
>gi|148701877|gb|EDL33824.1| mCG140646 [Mus musculus]
Length = 207
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|81673590|gb|AAI09794.1| High-mobility group box 3 [Bos taurus]
gi|296471156|tpg|DAA13271.1| TPA: high mobility group protein B3 isoform 1 [Bos taurus]
Length = 236
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 51 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 87
>gi|148693352|gb|EDL25299.1| mCG18380 [Mus musculus]
Length = 83
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 22 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 58
>gi|344237192|gb|EGV93295.1| High mobility group protein B1 [Cricetulus griseus]
Length = 203
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 39
>gi|213513415|ref|NP_001133101.1| high mobility group protein B1 [Salmo salar]
gi|197631937|gb|ACH70692.1| high-mobility group box 1 [Salmo salar]
Length = 203
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW++
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRT 50
>gi|405975742|gb|EKC40290.1| High mobility group protein DSP1 [Crassostrea gigas]
Length = 201
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YAFFVQ CREEHKKK P+ENVVFAEF+KKCA++WK
Sbjct: 14 SYAFFVQTCREEHKKKCPDENVVFAEFTKKCAQKWK 49
>gi|348525338|ref|XP_003450179.1| PREDICTED: high mobility group-T protein-like isoform 1
[Oreochromis niloticus]
Length = 200
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 50
>gi|291413749|ref|XP_002723129.1| PREDICTED: high-mobility group box 2 [Oryctolagus cuniculus]
Length = 219
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHK+KHP+ +V F EFSKKC+ERWK+
Sbjct: 7 NKPRGKMSSYAFFVQTCREEHKRKHPDSSVNFVEFSKKCSERWKT 51
>gi|351696237|gb|EHA99155.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 201
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK
Sbjct: 3 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 38
>gi|5542190|pdb|1CKT|A Chain A, Crystal Structure Of Hmg1 Domain A Bound To A
Cisplatin-modified Dna Duplex
Length = 71
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 44
>gi|221221148|gb|ACM09235.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW++
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRT 50
>gi|221221482|gb|ACM09402.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW++
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRT 50
>gi|148680808|gb|EDL12755.1| mCG1036273 [Mus musculus]
Length = 105
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|47227049|emb|CAG00411.1| unnamed protein product [Tetraodon nigroviridis]
Length = 179
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V F+EFS+KC+ERWK+
Sbjct: 18 SYAYFVQTCREEHKKKHPDASVNFSEFSRKCSERWKT 54
>gi|441595508|ref|XP_004087247.1| PREDICTED: uncharacterized protein LOC101177382, partial [Nomascus
leucogenys]
Length = 276
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 161 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 197
>gi|221221758|gb|ACM09540.1| High mobility group-T protein [Salmo salar]
Length = 203
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW++
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRT 50
>gi|148694630|gb|EDL26577.1| mCG10155, isoform CRA_d [Mus musculus]
Length = 220
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 35 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 71
>gi|338815383|gb|AEJ08754.1| HMGB-like protein [Crassostrea ariakensis]
Length = 202
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 34/36 (94%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YAFFVQ CREEHKKK P+ENVVFAEF+KKCA++WK
Sbjct: 14 SYAFFVQTCREEHKKKCPDENVVFAEFTKKCAQKWK 49
>gi|397466921|ref|XP_003805186.1| PREDICTED: high mobility group protein B3 [Pan paniscus]
gi|410057106|ref|XP_001135676.3| PREDICTED: high mobility group protein B3 isoform 1 [Pan
troglodytes]
gi|426397737|ref|XP_004065063.1| PREDICTED: high mobility group protein B3 isoform 2 [Gorilla
gorilla gorilla]
gi|119619804|gb|EAW99398.1| high-mobility group box 3, isoform CRA_b [Homo sapiens]
Length = 220
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 35 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 71
>gi|432889764|ref|XP_004075350.1| PREDICTED: high mobility group-T protein-like [Oryzias latipes]
Length = 194
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 50
>gi|291399740|ref|XP_002716281.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 243
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKK+HP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKRHPDASVNFSEFSKKCSERWKT 51
>gi|335892928|gb|AEH59759.1| high mobility group box 1 [Lethenteron camtschaticum]
Length = 208
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKK+PE +V FAEFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKT 51
>gi|1419611|emb|CAA67363.1| HMG [Lampetra fluviatilis]
Length = 208
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKK+PE +V FAEFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKT 51
>gi|291410190|ref|XP_002721383.1| PREDICTED: high-mobility group box 3 [Oryctolagus cuniculus]
Length = 215
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 30 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 66
>gi|410256408|gb|JAA16171.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|410932269|ref|XP_003979516.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
gi|410933007|ref|XP_003979884.1| PREDICTED: high mobility group-T protein-like [Takifugu rubripes]
Length = 209
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFS+KC+ERWK+
Sbjct: 18 SYAFFVQTCREEHKKKHPDASVNFSEFSRKCSERWKT 54
>gi|387016392|gb|AFJ50315.1| High mobility group protein B1 [Crotalus adamanteus]
Length = 215
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|149635755|ref|XP_001508702.1| PREDICTED: high mobility group protein B1-like [Ornithorhynchus
anatinus]
Length = 215
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDAAVNFSEFSKKCSERWKT 51
>gi|392879586|gb|AFM88625.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA FVQ CREEHKKKHPE+ V F EFSKKC+ERWK+
Sbjct: 29 TSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKT 66
>gi|395754558|ref|XP_002832281.2| PREDICTED: high mobility group protein B3 isoform 2 [Pongo
abelii]
Length = 199
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|74181373|dbj|BAE29962.1| unnamed protein product [Mus musculus]
Length = 215
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHK+KHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKRKHPDASVNFSEFSKKCSERWKT 51
>gi|221221710|gb|ACM09516.1| High mobility group protein B1 [Salmo salar]
Length = 179
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK
Sbjct: 14 SYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWK 49
>gi|426258242|ref|XP_004022724.1| PREDICTED: high mobility group protein B3 [Ovis aries]
Length = 248
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 86 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 122
>gi|89475586|gb|ABD73318.1| high-mobility group box 1 [Oncorhynchus mykiss]
Length = 154
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHPE +V F+EFSKKC+ERW++
Sbjct: 14 SYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWRT 50
>gi|392876858|gb|AFM87261.1| high mobility group protein [Callorhinchus milii]
gi|392878442|gb|AFM88053.1| high mobility group protein [Callorhinchus milii]
gi|392880194|gb|AFM88929.1| high mobility group protein [Callorhinchus milii]
gi|392881188|gb|AFM89426.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA FVQ CREEHKKKHPE+ V F EFSKKC+ERWK+
Sbjct: 29 TSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKT 66
>gi|392878936|gb|AFM88300.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA FVQ CREEHKKKHPE+ V F EFSKKC+ERWK+
Sbjct: 29 TSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKT 66
>gi|379698916|ref|NP_001243929.1| HMGB protein [Bombyx mori]
gi|337729569|gb|AEI70325.1| HMGB protein [Bombyx mori]
Length = 195
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CREEHKKK+P+ +V+FA FSKKCAERW +
Sbjct: 105 NKPRGRMTAYAFFVQTCREEHKKKYPDVSVIFAAFSKKCAERWNT 149
>gi|410219302|gb|JAA06870.1| high mobility group box 3 [Pan troglodytes]
Length = 199
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|348551110|ref|XP_003461373.1| PREDICTED: high mobility group protein B3-like [Cavia porcellus]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|354495940|ref|XP_003510086.1| PREDICTED: high mobility group protein B3-like [Cricetulus
griseus]
gi|344249016|gb|EGW05120.1| High mobility group protein B3 [Cricetulus griseus]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|296236643|ref|XP_002763412.1| PREDICTED: high mobility group protein B3-like [Callithrix
jacchus]
Length = 203
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|167773205|gb|ABZ92037.1| high-mobility group box 3 [synthetic construct]
Length = 198
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|109132602|ref|XP_001091672.1| PREDICTED: high mobility group protein B3-like isoform 3 [Macaca
mulatta]
gi|109132606|ref|XP_001091441.1| PREDICTED: high mobility group protein B3-like isoform 1 [Macaca
mulatta]
gi|402911729|ref|XP_003918461.1| PREDICTED: high mobility group protein B3 isoform 1 [Papio
anubis]
gi|402911731|ref|XP_003918462.1| PREDICTED: high mobility group protein B3 isoform 2 [Papio
anubis]
Length = 201
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|71143137|ref|NP_005333.2| high mobility group protein B3 [Homo sapiens]
gi|426397735|ref|XP_004065062.1| PREDICTED: high mobility group protein B3 isoform 1 [Gorilla
gorilla gorilla]
gi|426397739|ref|XP_004065064.1| PREDICTED: high mobility group protein B3 isoform 3 [Gorilla
gorilla gorilla]
gi|85701353|sp|O15347.4|HMGB3_HUMAN RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|47124341|gb|AAH70482.1| HMGB3 protein [Homo sapiens]
gi|117645316|emb|CAL38124.1| hypothetical protein [synthetic construct]
gi|117646384|emb|CAL38659.1| hypothetical protein [synthetic construct]
gi|119619803|gb|EAW99397.1| high-mobility group box 3, isoform CRA_a [Homo sapiens]
gi|410351655|gb|JAA42431.1| high mobility group box 3 [Pan troglodytes]
gi|410351657|gb|JAA42432.1| high mobility group box 3 [Pan troglodytes]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|392354293|ref|XP_003751730.1| PREDICTED: high mobility group protein B3-like isoform 1 [Rattus
norvegicus]
Length = 241
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 56 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 92
>gi|290560936|ref|NP_001166812.1| high mobility group box 3 [Rattus norvegicus]
gi|392354295|ref|XP_003751731.1| PREDICTED: high mobility group protein B3-like isoform 2 [Rattus
norvegicus]
gi|149027076|gb|EDL82825.1| rCG56793 [Rattus norvegicus]
gi|165971283|gb|AAI58740.1| Hmgb3 protein [Rattus norvegicus]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|148694627|gb|EDL26574.1| mCG10155, isoform CRA_b [Mus musculus]
Length = 206
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 21 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 57
>gi|355762621|gb|EHH62030.1| hypothetical protein EGM_20207 [Macaca fascicularis]
Length = 201
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|229367846|gb|ACQ58903.1| High mobility group protein B2 [Anoplopoma fimbria]
Length = 213
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFV CREEHKKKHP +V FAEFSKKC+ERWK+
Sbjct: 6 NKPRGKTSSYAFFVATCREEHKKKHPGVSVGFAEFSKKCSERWKT 50
>gi|410989557|ref|XP_004001438.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Felis catus]
Length = 201
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|403295522|ref|XP_003938690.1| PREDICTED: high mobility group protein B3-like [Saimiri
boliviensis boliviensis]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|355705241|gb|EHH31166.1| hypothetical protein EGK_21042 [Macaca mulatta]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|6680231|ref|NP_032279.1| high mobility group protein B3 [Mus musculus]
gi|20138160|sp|O54879.3|HMGB3_MOUSE RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|2738989|gb|AAC16925.1| high mobility group protein homolog HMG4 [Mus musculus]
gi|15030059|gb|AAH11276.1| Hmgb3 protein [Mus musculus]
gi|26327985|dbj|BAC27733.1| unnamed protein product [Mus musculus]
gi|54035419|gb|AAH83352.1| High mobility group box 3 [Mus musculus]
gi|74146994|dbj|BAE27437.1| unnamed protein product [Mus musculus]
gi|74186760|dbj|BAE34835.1| unnamed protein product [Mus musculus]
gi|74192972|dbj|BAE34988.1| unnamed protein product [Mus musculus]
gi|74194280|dbj|BAE24671.1| unnamed protein product [Mus musculus]
gi|148694626|gb|EDL26573.1| mCG10155, isoform CRA_a [Mus musculus]
gi|148694628|gb|EDL26575.1| mCG10155, isoform CRA_a [Mus musculus]
gi|187957408|gb|AAI58038.1| High mobility group box 3 [Mus musculus]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|311277128|ref|XP_003135516.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|2285963|emb|CAA71143.1| high mobility group protein 2a [Homo sapiens]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|355694844|gb|AER99804.1| high-mobility group box 3 [Mustela putorius furo]
Length = 197
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 17 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 53
>gi|410256410|gb|JAA16172.1| high mobility group box 3 [Pan troglodytes]
Length = 213
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|395857208|ref|XP_003800997.1| PREDICTED: high mobility group protein B3-like [Otolemur
garnettii]
Length = 225
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKA 51
>gi|164450473|ref|NP_001106728.1| high mobility group protein B3 isoform 2 [Bos taurus]
gi|146324910|sp|Q32L31.2|HMGB3_BOVIN RecName: Full=High mobility group protein B3
gi|296471157|tpg|DAA13272.1| TPA: high mobility group protein B3 isoform 2 [Bos taurus]
gi|399227521|gb|AFP36466.1| HMGB3 transcript variant 1/2 [Bos taurus]
gi|399227522|gb|AFP36467.1| HMGB3 transcript variant 3 [Bos taurus]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|31873563|emb|CAD97768.1| hypothetical protein [Homo sapiens]
Length = 127
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 45 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 81
>gi|57112857|ref|XP_538194.1| PREDICTED: high mobility group protein B3 [Canis lupus
familiaris]
gi|338729649|ref|XP_001505130.3| PREDICTED: high mobility group protein B3-like isoform 1 [Equus
caballus]
Length = 201
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|148682307|gb|EDL14254.1| mCG114640 [Mus musculus]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|417396975|gb|JAA45521.1| Putative nucleosome-binding factor spn pob3 subunit [Desmodus
rotundus]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|344299188|ref|XP_003421269.1| PREDICTED: high mobility group protein B3-like [Loxodonta
africana]
Length = 200
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|301778413|ref|XP_002924621.1| PREDICTED: high mobility group protein B3-like [Ailuropoda
melanoleuca]
Length = 201
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|291403518|ref|XP_002718101.1| PREDICTED: high mobility group box 3-like [Oryctolagus cuniculus]
Length = 197
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|225704132|gb|ACO07912.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK
Sbjct: 14 SYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWK 49
>gi|281338637|gb|EFB14221.1| hypothetical protein PANDA_014002 [Ailuropoda melanoleuca]
Length = 168
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|56384901|gb|AAV85889.1| high mobility group 1 protein [Pelodiscus sinensis]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|253756810|gb|ACT35162.1| HmgB3y, partial [Monodelphis domestica]
Length = 193
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 12 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKN 48
>gi|225703866|gb|ACO07779.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 194
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK
Sbjct: 14 SYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWK 49
>gi|221221922|gb|ACM09622.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK
Sbjct: 14 SYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWK 49
>gi|221219434|gb|ACM08378.1| High mobility group protein B1 [Salmo salar]
Length = 196
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 32/36 (88%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YA+FVQ CR EHKKKHPE +V FAEFSKKC+ERWK
Sbjct: 14 SYAYFVQTCRAEHKKKHPEASVNFAEFSKKCSERWK 49
>gi|254826706|ref|NP_001157151.1| high mobility group protein B3 [Monodelphis domestica]
gi|253756818|gb|ACT35166.1| HmgB3x [Monodelphis domestica]
Length = 201
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|395545985|ref|XP_003774876.1| PREDICTED: high mobility group protein B3-like [Sarcophilus
harrisii]
Length = 201
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|149410917|ref|XP_001509199.1| PREDICTED: high mobility group protein B3-like isoform 1
[Ornithorhynchus anatinus]
gi|345306624|ref|XP_003428488.1| PREDICTED: high mobility group protein B3-like isoform 2
[Ornithorhynchus anatinus]
Length = 201
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|395821450|ref|XP_003784053.1| PREDICTED: high mobility group protein B1-like [Otolemur
garnettii]
Length = 221
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAF VQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFSVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|444510285|gb|ELV09567.1| High mobility group protein B3 [Tupaia chinensis]
Length = 197
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 3 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 39
>gi|729728|sp|P40618.2|HMGB3_CHICK RecName: Full=High mobility group protein B3; AltName: Full=High
mobility group protein 2a; Short=HMG-2a; AltName:
Full=High mobility group protein 4; Short=HMG-4
gi|63494|emb|CAA45065.1| HMG2a [Gallus gallus]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|224098124|ref|XP_002198052.1| PREDICTED: high mobility group protein B3 isoform 1 [Taeniopygia
guttata]
gi|326924638|ref|XP_003208532.1| PREDICTED: high mobility group protein B3-like [Meleagris
gallopavo]
gi|449498655|ref|XP_004177286.1| PREDICTED: high mobility group protein B3 isoform 2 [Taeniopygia
guttata]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|351715817|gb|EHB18736.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 165
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
YAFFVQ CREEHKKKHP+ ++ F+EFSKKC+ERWK+
Sbjct: 16 YAFFVQTCREEHKKKHPDASINFSEFSKKCSERWKT 51
>gi|403305854|ref|XP_003943467.1| PREDICTED: high mobility group protein B3 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|169409528|gb|ACA57879.1| High mobility group protein B3 (predicted) [Callicebus moloch]
Length = 193
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 31/36 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
AYAFFVQ CREEHKKK+PE V FAEFSKKC ERWK
Sbjct: 15 AYAFFVQTCREEHKKKNPEAPVNFAEFSKKCPERWK 50
>gi|347921933|ref|NP_990626.2| high mobility group protein B3 [Gallus gallus]
Length = 217
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 30 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 66
>gi|332245567|ref|XP_003271930.1| PREDICTED: high mobility group protein B3 [Nomascus leucogenys]
Length = 177
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|171848741|pdb|2EQZ|A Chain A, Solution Structure Of The First Hmg-Box Domain From High
Mobility Group Protein B3
Length = 86
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 22 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 58
>gi|148694629|gb|EDL26576.1| mCG10155, isoform CRA_c [Mus musculus]
Length = 101
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|320091041|gb|ADW08807.1| high mobility group box X [Lethenteron camtschaticum]
Length = 225
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKKHP ++V F +FS+KC+ERWK
Sbjct: 15 SYAYFVQTCREEHKKKHPNDSVAFTDFSRKCSERWKG 51
>gi|449269345|gb|EMC80131.1| High mobility group protein B3 [Columba livia]
Length = 202
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKT 51
>gi|14522874|gb|AAK64599.1|AF281043_1 high mobility group 1 protein [Homo sapiens]
gi|7960300|gb|AAF71287.1| high mobility group protein HMG1 [Homo sapiens]
Length = 50
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 33/36 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWK 50
>gi|355782652|gb|EHH64573.1| hypothetical protein EGM_17820, partial [Macaca fascicularis]
Length = 159
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 46/92 (50%), Gaps = 27/92 (29%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAPV 62
NK + AYAFFVQ CRE HKKK+PE +V FAEFSKKC+ERW
Sbjct: 7 NKPKGKMSAYAFFVQTCREAHKKKNPEVSVNFAEFSKKCSERW----------------- 49
Query: 63 FLTFLSRMKDSILFC---------VNPVLAVG 85
T + K LFC NP +++G
Sbjct: 50 -TTMPGKEKSKFLFCSEFRPKIKSTNPGISIG 80
>gi|345318648|ref|XP_001512288.2| PREDICTED: high mobility group protein B3-like [Ornithorhynchus
anatinus]
Length = 97
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|322517988|gb|ADX06860.1| high mobility group protein B1 [Sciaenops ocellatus]
Length = 206
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Q K + +YA+FVQ CREEHKKKHP+ +V FAEFSKKC+ RWK+
Sbjct: 5 QGKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSGRWKT 50
>gi|444730168|gb|ELW70558.1| High mobility group protein B3 [Tupaia chinensis]
Length = 369
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+ E V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNLEVPVNFAEFSKKCSERWKT 51
>gi|225709792|gb|ACO10742.1| High mobility group protein B2 [Caligus rogercresseyi]
Length = 215
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFV CREEHKKKHP +V F+EFSKKC+ERW++
Sbjct: 7 NKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRT 51
>gi|213514690|ref|NP_001133170.1| high-mobility group box 2 [Salmo salar]
gi|197632301|gb|ACH70874.1| high-mobility group box 2 [Salmo salar]
gi|221219834|gb|ACM08578.1| High mobility group protein B2 [Salmo salar]
gi|221220870|gb|ACM09096.1| High mobility group protein B2 [Salmo salar]
gi|223646276|gb|ACN09896.1| High mobility group protein B2 [Salmo salar]
gi|223646962|gb|ACN10239.1| High mobility group protein B2 [Salmo salar]
gi|223672123|gb|ACN12243.1| High mobility group protein B2 [Salmo salar]
gi|223672825|gb|ACN12594.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFV CREEHKKKHP +V F+EFSKKC+ERW++
Sbjct: 7 NKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRT 51
>gi|609553|gb|AAA74556.1| HMG-T2 [Oncorhynchus mykiss]
Length = 215
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFV CREEHKKKHP +V F+EFSKKC+ERW++
Sbjct: 7 NKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRT 51
>gi|221221606|gb|ACM09464.1| High mobility group protein B2 [Salmo salar]
gi|223646184|gb|ACN09850.1| High mobility group protein B2 [Salmo salar]
gi|223646756|gb|ACN10136.1| High mobility group protein B2 [Salmo salar]
gi|223672031|gb|ACN12197.1| High mobility group protein B2 [Salmo salar]
gi|223672611|gb|ACN12487.1| High mobility group protein B2 [Salmo salar]
Length = 214
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFV CREEHKKKHP +V F+EFSKKC+ERW++
Sbjct: 7 NKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRT 51
>gi|296479353|tpg|DAA21468.1| TPA: high-mobility group box 1-like [Bos taurus]
Length = 215
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEH KKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHTKKHPDASVNFSEFSKKCSERWKT 51
>gi|395859165|ref|XP_003801914.1| PREDICTED: high mobility group protein B1-like [Otolemur
garnettii]
Length = 220
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREE+KKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 36 SYAFFVQTCREEYKKKHPDASVSFSEFSKKCSERWKT 72
>gi|148235321|ref|NP_001089163.1| high mobility group box 3 [Xenopus laevis]
gi|55824420|gb|AAV66347.1| high mobility group B3b protein [Xenopus laevis]
gi|114108280|gb|AAI23148.1| LOC734200 protein [Xenopus laevis]
Length = 201
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKK+PE V FAEFSKKC+ERW+S
Sbjct: 15 AYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWRS 51
>gi|225716456|gb|ACO14074.1| High mobility group-T protein [Esox lucius]
Length = 56
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YA+FVQ CR+EHKKKHPE +V F+EFSKKC+ERWK
Sbjct: 14 SYAYFVQTCRQEHKKKHPEASVNFSEFSKKCSERWK 49
>gi|444706988|gb|ELW48300.1| High mobility group protein B2 [Tupaia chinensis]
Length = 154
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C EEHKKKHP+ +V F EFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCWEEHKKKHPDSSVTFTEFSKKCSERWKT 39
>gi|355705177|gb|EHH31102.1| hypothetical protein EGK_20957, partial [Macaca mulatta]
Length = 185
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + AYAFFVQ+CREEHKKK+PE V FAEFSKKC+ RWK+
Sbjct: 7 KKLKGKVSAYAFFVQMCREEHKKKYPEVPVNFAEFSKKCSRRWKT 51
>gi|355757722|gb|EHH61247.1| hypothetical protein EGM_19210, partial [Macaca fascicularis]
Length = 185
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + AYAFFVQ+CREEHKKK+PE V FAEFSKKC+ RWK+
Sbjct: 8 KLKGKVSAYAFFVQMCREEHKKKYPEVPVNFAEFSKKCSRRWKT 51
>gi|358410870|ref|XP_003581858.1| PREDICTED: high mobility group protein B3-like [Bos taurus]
Length = 197
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AY+FFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|109469394|ref|XP_001076232.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
gi|392338825|ref|XP_003753645.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
Length = 214
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+E SKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEVSKKCSERWKT 51
>gi|351710199|gb|EHB13118.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 191
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+P+ V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPDVPVNFAEFSKKCSERWKT 51
>gi|148704837|gb|EDL36784.1| mCG125662 [Mus musculus]
Length = 154
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 10/56 (17%)
Query: 2 QNKLNM----------QGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+N+LNM + + AFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 20 ENQLNMGKGDPKKPRGKMSSNAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 75
>gi|3342575|gb|AAC27652.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CRE HKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREGHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|52345682|ref|NP_001004888.1| high mobility group box 3 [Xenopus (Silurana) tropicalis]
gi|49522962|gb|AAH75290.1| MGC88931 protein [Xenopus (Silurana) tropicalis]
gi|89267024|emb|CAJ81774.1| high-mobility group box 3 [Xenopus (Silurana) tropicalis]
Length = 202
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKT 51
>gi|256070479|ref|XP_002571570.1| high mobility group protein [Schistosoma mansoni]
gi|97976778|tpe|CAJ29301.1| TPA: putative high mobility group B2 protein [Schistosoma
mansoni]
gi|353230496|emb|CCD76667.1| high mobility group protein [Schistosoma mansoni]
Length = 226
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 35/45 (77%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+NK AYA FVQV REEHKKKHP E +VF++FSKKCAERWK
Sbjct: 7 KNKPKGPMSAYACFVQVIREEHKKKHPGEQIVFSDFSKKCAERWK 51
>gi|148684659|gb|EDL16606.1| mCG50402 [Mus musculus]
Length = 214
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFF+Q CR+EHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 13 SYAFFMQTCRKEHKKKHPDASVNFSEFSKKCSERWKT 49
>gi|444706991|gb|ELW48303.1| High mobility group protein B1 [Tupaia chinensis]
Length = 103
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C+EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCQEEHKKKHPDASVNFSEFSKKCSERWKT 39
>gi|52219178|ref|NP_001004674.1| high-mobility group box 2b [Danio rerio]
gi|51858850|gb|AAH81415.1| High-mobility group box 2 [Danio rerio]
gi|182889482|gb|AAI65150.1| Hmgb2 protein [Danio rerio]
Length = 214
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CR+EHK+K P+ V F+EFSKKC+ERWKS
Sbjct: 7 NKPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKS 51
>gi|392884154|gb|AFM90909.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 32/38 (84%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA FVQ CREEHKKKHPE+ V F EFSKKC+ERW++
Sbjct: 29 TSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWET 66
>gi|444510699|gb|ELV09703.1| High mobility group protein B2 [Tupaia chinensis]
Length = 233
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ C EEHKKKHP+ +V FAEFSKKC+E+WK+
Sbjct: 6 HNKPRGKMSSYAFFVQTCGEEHKKKHPDSSVNFAEFSKKCSEKWKA 51
>gi|359062996|ref|XP_003585778.1| PREDICTED: high mobility group protein B3-like, partial [Bos
taurus]
Length = 186
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AY+FFVQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYSFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|82658290|ref|NP_001032501.1| high mobility group protein B2 [Danio rerio]
gi|81294190|gb|AAI07992.1| Zgc:123215 [Danio rerio]
Length = 213
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKK+P +V F+EFSKKC+ERW++
Sbjct: 6 NKPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRT 50
>gi|3342573|gb|AAC27651.1| high mobility group protein [Nannospalax ehrenbergi]
Length = 215
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFS++C+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSERCSERWKT 51
>gi|209734090|gb|ACI67914.1| High mobility group protein B2 [Salmo salar]
Length = 136
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFV CREEHKKKHP +V F+EFSKKC+ERW++
Sbjct: 7 NKPKGKTSSYAFFVATCREEHKKKHPGTSVNFSEFSKKCSERWRT 51
>gi|213982973|ref|NP_001135648.1| uncharacterized protein LOC100216207 [Xenopus (Silurana)
tropicalis]
gi|156914901|gb|AAI52619.1| Hmgb2 protein [Danio rerio]
gi|197245630|gb|AAI68534.1| Unknown (protein for MGC:181066) [Xenopus (Silurana) tropicalis]
Length = 214
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + AYAFFVQ CR+EHK+K P+ V F+EFSKKC+ERWKS
Sbjct: 7 NKPKGKTSAYAFFVQTCRDEHKRKGPDVPVNFSEFSKKCSERWKS 51
>gi|332260744|ref|XP_003279440.1| PREDICTED: uncharacterized protein LOC100604184 [Nomascus
leucogenys]
Length = 414
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+P+ V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPKVPVNFAEFSKKCSERWKT 51
>gi|444727522|gb|ELW68010.1| High mobility group protein B1 [Tupaia chinensis]
Length = 132
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ+CREEHKKKHP +V F EFSKKC++RWK+
Sbjct: 15 SYAFFVQICREEHKKKHPYASVNFPEFSKKCSDRWKT 51
>gi|387914724|gb|AFK10971.1| high mobility group box 1 [Callorhinchus milii]
Length = 226
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 32/38 (84%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
++A FVQ CREEHKKKHPE+ V F EFSKKC+ERWK+
Sbjct: 29 TSHALFVQTCREEHKKKHPEKVVSFTEFSKKCSERWKT 66
>gi|256090348|ref|XP_002581158.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|350646061|emb|CCD59339.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 293
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
YA FVQV REEH+KKHP ENV+F+EFSKKCAE+WK
Sbjct: 14 TPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWK 50
>gi|444729048|gb|ELW69479.1| High mobility group protein B1 [Tupaia chinensis]
Length = 172
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 34/37 (91%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFV+ C+EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYAFFVKTCQEEHKKKHPDASVNFSEFSKKCSERWKT 39
>gi|392333067|ref|XP_003752781.1| PREDICTED: high mobility group protein B3-like [Rattus
norvegicus]
gi|392353165|ref|XP_001067503.2| PREDICTED: high mobility group protein B3-like [Rattus
norvegicus]
Length = 212
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHK K+PE V FAEFSKKC+ERWK+
Sbjct: 29 AYAFFVQTCREEHKTKNPEVPVNFAEFSKKCSERWKT 65
>gi|222087985|gb|ACM41855.1| high mobility group box 2-like protein [Epinephelus coioides]
Length = 212
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFF+ CREEHK+KHP +V FAEFSKKC+ERWK+
Sbjct: 1 NKPRGKTSSYAFFIADCREEHKRKHPGTSVGFAEFSKKCSERWKT 45
>gi|444524683|gb|ELV13903.1| High mobility group protein B2 [Tupaia chinensis]
Length = 104
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFF+Q CREEHKKKHP+ +V F +FSKKC+ERWK+
Sbjct: 7 NKERGKVPSYAFFMQTCREEHKKKHPDSSVNFVKFSKKCSERWKT 51
>gi|444728659|gb|ELW69107.1| High mobility group protein B1 [Tupaia chinensis]
Length = 182
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+ AFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SQAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|444721192|gb|ELW61941.1| High mobility group protein B1 [Tupaia chinensis]
Length = 300
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|426232480|ref|XP_004010250.1| PREDICTED: high mobility group protein B1-like [Ovis aries]
Length = 201
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREE KKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREERKKKHPDASVNFSEFSKKCSERWKT 51
>gi|351699672|gb|EHB02591.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 104
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+Y F VQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYTFLVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|334348387|ref|XP_003342057.1| PREDICTED: LOW QUALITY PROTEIN: high mobility group protein B3
[Monodelphis domestica]
Length = 208
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAF VQ CREEHKKK+PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFLVQTCREEHKKKNPEVPVNFAEFSKKCSERWKT 51
>gi|159162034|pdb|1AAB|A Chain A, Nmr Structure Of Rat Hmg1 Hmga Fragment
Length = 83
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 14 SYAFFVQTSREEHKKKHPDASVNFSEFSKKCSERWKT 50
>gi|1085210|pir||S48708 high-mobility-group-1 protein - trout
Length = 204
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CR EHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTCRIEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|51339|emb|CAA47900.1| high mobility group 2 protein [Mus musculus]
Length = 205
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP +V FAE SKKC++RWK+
Sbjct: 15 SYAFFVQTCREEHKKKHPNSSVNFAEISKKCSKRWKT 51
>gi|350588033|ref|XP_003482539.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
gi|350588037|ref|XP_003482541.1| PREDICTED: high mobility group protein B3-like [Sus scrofa]
Length = 196
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 32/38 (84%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSS 48
AY FFVQ CREEHKKK+PE V FAEFSKKC+ERWK +
Sbjct: 15 AYDFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKPT 52
>gi|226486704|emb|CAX74429.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 226
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKF 59
+NK AY+ FVQV REEHKKKHP E +VF++FSKKCAERWK ++ P ++F
Sbjct: 7 KNKPKGPMSAYSCFVQVIREEHKKKHPGEQIVFSDFSKKCAERWK---LMTPKEKKRF 61
>gi|97976795|tpe|CAJ29302.1| TPA: putative high mobility group B3 protein [Schistosoma
mansoni]
Length = 246
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+N+ YA FVQV REEH+KKHP ENV+F+EFSKKCAE+WK
Sbjct: 6 KNRPKPPMTPYACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWK 50
>gi|403300479|ref|XP_003940964.1| PREDICTED: high mobility group protein B1-like [Saimiri
boliviensis boliviensis]
Length = 215
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 13 AFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AFFVQ CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 17 AFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|56758270|gb|AAW27275.1| SJCHGC02538 protein [Schistosoma japonicum]
gi|226486700|emb|CAX74427.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226486702|emb|CAX74428.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 226
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKF 59
+NK AY+ FVQV REEHKKKHP E +VF++FSKKCAERWK ++ P ++F
Sbjct: 7 KNKPKGPMSAYSCFVQVIREEHKKKHPGEQIVFSDFSKKCAERWK---LMTPKEKKRF 61
>gi|205539816|sp|P0C6E5.1|HG3BL_HUMAN RecName: Full=Putative high mobility group protein B3-like
protein
Length = 187
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+P+ + FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKT 51
>gi|332847763|ref|XP_003315517.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan troglodytes]
gi|397485725|ref|XP_003813991.1| PREDICTED: putative high mobility group protein B3-like
protein-like [Pan paniscus]
Length = 207
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+P+ V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPKVPVNFAEFSKKCSERWKT 51
>gi|444726589|gb|ELW67113.1| High mobility group protein B1, partial [Tupaia chinensis]
Length = 219
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAF VQ CREEHKKKHP+ +V F+E SKKC+ERWK+
Sbjct: 21 SYAFSVQTCREEHKKKHPDASVSFSELSKKCSERWKT 57
>gi|444730527|gb|ELW70909.1| High mobility group protein B1 [Tupaia chinensis]
Length = 238
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKA 51
>gi|403286915|ref|XP_003934714.1| PREDICTED: high mobility group protein B1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286917|ref|XP_003934715.1| PREDICTED: high mobility group protein B1-like isoform 2 [Saimiri
boliviensis boliviensis]
gi|403286919|ref|XP_003934716.1| PREDICTED: high mobility group protein B1-like isoform 3 [Saimiri
boliviensis boliviensis]
gi|403286921|ref|XP_003934717.1| PREDICTED: high mobility group protein B1-like isoform 4 [Saimiri
boliviensis boliviensis]
Length = 206
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + + AFFVQ CREEHKK+HP+ +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSCAFFVQTCREEHKKQHPDSSVNFSEFSKKCSERWKT 51
>gi|185135647|ref|NP_001118186.1| high mobility group-T protein [Oncorhynchus mykiss]
gi|123382|sp|P07746.2|HMGT_ONCMY RecName: Full=High mobility group-T protein; Short=HMG-T;
AltName: Full=HMG-T1; Short=HMG-1
gi|64328|emb|CAA26500.1| unnamed protein product [Oncorhynchus mykiss]
Length = 204
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ REEHKKKHPE +V F+EFSKKC+ERWK+
Sbjct: 14 SYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKT 50
>gi|211929|gb|AAA48819.1| high-mobility group-2 protein [Gallus gallus]
Length = 207
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 35/45 (77%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YA+FVQ C EHKKKHP+ +V FAEFS+KC+ERWK+
Sbjct: 7 NKPRGKMSSYAYFVQTCPREHKKKHPDSSVNFAEFSRKCSERWKT 51
>gi|444732357|gb|ELW72657.1| High mobility group protein B1 [Tupaia chinensis]
Length = 88
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFF Q C+EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYAFFAQACQEEHKKKHPDASVNFSEFSKKCSERWKT 39
>gi|189256|gb|AAC15850.1| non-histone chromosomal protein [Homo sapiens]
Length = 109
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKK +PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKKXNPEVPVNFAEFSKKCSERWKT 51
>gi|225703820|gb|ACO07756.1| High mobility group protein B1 [Oncorhynchus mykiss]
Length = 193
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YA+FVQ CR EHKKK PE +V FAEFSKKC+ERWK
Sbjct: 14 SYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWK 49
>gi|148669729|gb|EDL01676.1| mCG1025710 [Mus musculus]
Length = 178
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 10/56 (17%)
Query: 2 QNKLNM----------QGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+N+LNM + +YAFFVQ C EEHKKKHP+ +V F+EFSKKC+ERW++
Sbjct: 3 ENQLNMGKGDPKELRDKTSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWET 58
>gi|351708060|gb|EHB10979.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 241
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + ++AFFVQ CREEHKKKHP V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSHAFFVQTCREEHKKKHPNAFVNFSEFSKKCSERWKT 51
>gi|351702997|gb|EHB05916.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 204
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKH + +V F+E+SKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHSDASVKFSEYSKKCSERWKT 51
>gi|27450225|gb|AAO14565.1|AF462604_2 HMG-L6 [Mus musculus]
Length = 199
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 10/56 (17%)
Query: 2 QNKLNM----------QGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+N+LNM + +YAFFVQ C EEHKKKHP+ +V F+EFSKKC+ERW++
Sbjct: 3 ENQLNMGKGDPKELRDKTSSYAFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWET 58
>gi|392876654|gb|AFM87159.1| high mobility group protein [Callorhinchus milii]
Length = 226
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA FVQ CREEHKKKHPE+ V F EFSKKC+E WK+
Sbjct: 29 TSYALFVQTCREEHKKKHPEKVVSFTEFSKKCSEGWKT 66
>gi|321476548|gb|EFX87508.1| hypothetical protein DAPPUDRAFT_306496 [Daphnia pulex]
Length = 191
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
NK + AYA+F+Q CREEHK K+P+ENVVF EFS++CA +WK
Sbjct: 9 NKPRGRMTAYAYFMQTCREEHKNKYPDENVVFLEFSRRCAGQWK 52
>gi|223649496|gb|ACN11506.1| High mobility group protein B3 [Salmo salar]
Length = 207
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKK PE V FAEFSKKC+ RWK+
Sbjct: 15 AYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWKT 51
>gi|225715078|gb|ACO13385.1| High mobility group protein B3 [Esox lucius]
Length = 204
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKK+PE V F+EFSKKCA RWK+
Sbjct: 15 AYAYFVQTCREEHKKKNPEIPVNFSEFSKKCAGRWKT 51
>gi|444518100|gb|ELV11958.1| High mobility group protein B1 [Tupaia chinensis]
Length = 162
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEH+KKHP+ V F+EFS+KC+ERWK+
Sbjct: 15 SYAFFVQTCREEHRKKHPDALVDFSEFSQKCSERWKT 51
>gi|351706443|gb|EHB09362.1| High mobility group protein B3 [Heterocephalus glaber]
Length = 226
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ C+EEHKKK+P+ V FAEFSKKC+ERWK+
Sbjct: 34 AYAFFVQTCKEEHKKKNPKVPVNFAEFSKKCSERWKT 70
>gi|183212219|gb|ACC54772.1| high mobility group box 3 [Xenopus borealis]
Length = 152
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKK PE V F+EFSKKC+ERW++
Sbjct: 23 AYAYFVQTCREEHKKKDPEIPVNFSEFSKKCSERWRT 59
>gi|56756178|gb|AAW26264.1| SJCHGC08557 protein [Schistosoma japonicum]
Length = 177
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 32/35 (91%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
YA FVQV REEH+KKHP ENV+F+EFSKKCAE+WK
Sbjct: 16 YACFVQVIREEHRKKHPTENVIFSEFSKKCAEKWK 50
>gi|148229870|ref|NP_001080585.1| high mobility group box 3 [Xenopus laevis]
gi|27882654|gb|AAH44009.1| Hmgb3-prov protein [Xenopus laevis]
Length = 202
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKK+PE V F+EFSKKC+ERW+
Sbjct: 15 AYAYFVQTCREEHKKKNPEIPVNFSEFSKKCSERWRG 51
>gi|444716453|gb|ELW57303.1| High mobility group protein B1 [Tupaia chinensis]
Length = 213
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKK HP+ +V F+EFSKKC+E WK+
Sbjct: 3 SYAFFVQTCREEHKKMHPDASVNFSEFSKKCSESWKT 39
>gi|432091911|gb|ELK24758.1| High mobility group protein B1 [Myotis davidii]
Length = 224
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFF+Q CREEHKKKH + +V F+EFSKKC ERWK+
Sbjct: 109 SYAFFMQTCREEHKKKHSDSSVNFSEFSKKCLERWKT 145
>gi|444712566|gb|ELW53487.1| High mobility group protein B1 [Tupaia chinensis]
Length = 162
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EFSKKC+ER K+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERGKT 51
>gi|6624099|gb|AAF19244.1|AC007277_1 similar to nonhistone chromosomal protein HMG-1 [Homo sapiens];
probable pseudogene; similar to P09429 (PID:g123369)
[Homo sapiens]
Length = 191
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREE KKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREECKKKHPDASVNFSEFSKKCSERWKA 51
>gi|440911425|gb|ELR61099.1| High mobility group protein B3, partial [Bos grunniens mutus]
Length = 192
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ+CREEHKKK+ E V FAEFSKKC+ERWK+
Sbjct: 17 AYAFFVQMCREEHKKKNSEVPVNFAEFSKKCSERWKT 53
>gi|444732604|gb|ELW72891.1| High mobility group protein B2 [Tupaia chinensis]
Length = 139
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 34/45 (75%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ CREEHKKK P+ +V F EFSKKC ERWK+
Sbjct: 7 NKPRDKMSSYAFFVQTCREEHKKKLPDSSVNFTEFSKKCWERWKT 51
>gi|444518140|gb|ELV11977.1| High mobility group protein B3 [Tupaia chinensis]
Length = 198
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKK +ERWK+
Sbjct: 15 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKRSERWKT 51
>gi|344239055|gb|EGV95158.1| High mobility group protein B1 [Cricetulus griseus]
Length = 107
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+EF KKC+E WK+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNFSEFLKKCSENWKT 51
>gi|205780950|sp|B2RPK0.1|HGB1A_HUMAN RecName: Full=Putative high mobility group protein B1-like 1;
AltName: Full=High mobility group protein B1 pseudogene
1; AltName: Full=Putative high mobility group protein
1-like 1; Short=HMG-1L1
gi|187950665|gb|AAI37483.1| High-mobility group box 1-like 1 [Homo sapiens]
gi|187953577|gb|AAI37484.1| High-mobility group box 1-like 1 [Homo sapiens]
Length = 211
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKH + +V F+EFS KC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKT 51
>gi|410917315|ref|XP_003972132.1| PREDICTED: high mobility group protein B2-like [Takifugu
rubripes]
Length = 214
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFV CR+EHKKKHP V F+EFSKKC+ERWK+
Sbjct: 13 SYAFFVTTCRDEHKKKHPGTPVNFSEFSKKCSERWKN 49
>gi|392883890|gb|AFM90777.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|386783903|gb|AFJ24846.1| high mobility group-1 [Schmidtea mediterranea]
Length = 192
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
YA FVQV REEHKKKHP+E +VF+EFSK+C+E+WK
Sbjct: 11 TPYACFVQVVREEHKKKHPDEQIVFSEFSKRCSEKWK 47
>gi|221220618|gb|ACM08970.1| High mobility group protein B3 [Salmo salar]
gi|223646914|gb|ACN10215.1| High mobility group protein B3 [Salmo salar]
gi|223672777|gb|ACN12570.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAPVFLTFLSRM 70
AYA+FVQ CREEHK K+PE V F+EFSKKC+ RWK+ ++P KF +R
Sbjct: 15 AYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKT---MSPKEKSKFEDQAKQDKARY 71
Query: 71 KDSILFCVNPVLAVGSRILE 90
DS + P G + L+
Sbjct: 72 -DSEMTSYGPPGKRGKKALK 90
>gi|221219912|gb|ACM08617.1| High mobility group protein B3 [Salmo salar]
Length = 201
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAPVFLTFLSRM 70
AYA+FVQ CREEHK K+PE V F+EFSKKC+ RWK+ ++P KF +R
Sbjct: 15 AYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKT---MSPKEKSKFEDQAKQDKARY 71
Query: 71 KDSILFCVNPVLAVGSRILE 90
DS + P G + L+
Sbjct: 72 -DSEMTSYGPPGKRGKKALK 90
>gi|213515010|ref|NP_001133971.1| High mobility group protein B3 [Salmo salar]
gi|209156012|gb|ACI34238.1| High mobility group protein B3 [Salmo salar]
gi|223648118|gb|ACN10817.1| High mobility group protein B3 [Salmo salar]
Length = 206
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKK PE V FAEFSKKC+ RWK+
Sbjct: 15 SYAYFVQTCREEHKKKTPEIPVNFAEFSKKCSGRWKT 51
>gi|444515932|gb|ELV11007.1| High mobility group protein B3 [Tupaia chinensis]
Length = 212
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
YAFFVQ CREEHKKK+PE + F EFSKKC++RWK+
Sbjct: 15 TYAFFVQTCREEHKKKNPEVPINFTEFSKKCSKRWKT 51
>gi|392881260|gb|AFM89462.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392873666|gb|AFM85665.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392876742|gb|AFM87203.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392883682|gb|AFM90673.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392884250|gb|AFM90957.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392878084|gb|AFM87874.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392877754|gb|AFM87709.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|387913840|gb|AFK10529.1| high mobility group protein B1-like protein [Callorhinchus milii]
gi|392873522|gb|AFM85593.1| high mobility group protein [Callorhinchus milii]
gi|392873780|gb|AFM85722.1| high mobility group protein [Callorhinchus milii]
gi|392873902|gb|AFM85783.1| high mobility group protein [Callorhinchus milii]
gi|392873908|gb|AFM85786.1| high mobility group protein [Callorhinchus milii]
gi|392873950|gb|AFM85807.1| high mobility group protein [Callorhinchus milii]
gi|392873998|gb|AFM85831.1| high mobility group protein [Callorhinchus milii]
gi|392874244|gb|AFM85954.1| high mobility group protein [Callorhinchus milii]
gi|392874940|gb|AFM86302.1| high mobility group protein [Callorhinchus milii]
gi|392876248|gb|AFM86956.1| high mobility group protein [Callorhinchus milii]
gi|392876254|gb|AFM86959.1| high mobility group protein [Callorhinchus milii]
gi|392876362|gb|AFM87013.1| high mobility group protein [Callorhinchus milii]
gi|392876946|gb|AFM87305.1| high mobility group protein [Callorhinchus milii]
gi|392877468|gb|AFM87566.1| high mobility group protein [Callorhinchus milii]
gi|392877522|gb|AFM87593.1| high mobility group protein [Callorhinchus milii]
gi|392877744|gb|AFM87704.1| high mobility group protein [Callorhinchus milii]
gi|392879776|gb|AFM88720.1| high mobility group protein [Callorhinchus milii]
gi|392880382|gb|AFM89023.1| high mobility group protein [Callorhinchus milii]
gi|392880776|gb|AFM89220.1| high mobility group protein [Callorhinchus milii]
gi|392881032|gb|AFM89348.1| high mobility group protein [Callorhinchus milii]
gi|392881292|gb|AFM89478.1| high mobility group protein [Callorhinchus milii]
gi|392881318|gb|AFM89491.1| high mobility group protein [Callorhinchus milii]
gi|392883640|gb|AFM90652.1| high mobility group protein [Callorhinchus milii]
gi|392883646|gb|AFM90655.1| high mobility group protein [Callorhinchus milii]
gi|392883680|gb|AFM90672.1| high mobility group protein [Callorhinchus milii]
gi|392883988|gb|AFM90826.1| high mobility group protein [Callorhinchus milii]
gi|392884098|gb|AFM90881.1| high mobility group protein [Callorhinchus milii]
gi|392884156|gb|AFM90910.1| high mobility group protein [Callorhinchus milii]
gi|392884178|gb|AFM90921.1| high mobility group protein [Callorhinchus milii]
gi|392884306|gb|AFM90985.1| high mobility group protein [Callorhinchus milii]
gi|392884308|gb|AFM90986.1| high mobility group protein [Callorhinchus milii]
gi|392884314|gb|AFM90989.1| high mobility group protein [Callorhinchus milii]
gi|392884420|gb|AFM91042.1| high mobility group protein [Callorhinchus milii]
gi|392884450|gb|AFM91057.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392878832|gb|AFM88248.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392876068|gb|AFM86866.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392881066|gb|AFM89365.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392876906|gb|AFM87285.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392883678|gb|AFM90671.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|46394418|gb|AAS91553.1| AmphiHMG1/2 [Branchiostoma belcheri tsingtauense]
Length = 222
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAP 61
+NK + AYA FVQ CR EH+KK+P + VVF EFS+KCA RWK+ +N ++F
Sbjct: 5 KNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKT---MNDDEKKRFQA 61
Query: 62 VFLTFLSRMKDSILFCVNPVLAVGSRILEK 91
+ R + + V P A G R K
Sbjct: 62 LAEADKRRYEQDMAKYVPPKGAEGGRRKRK 91
>gi|392873904|gb|AFM85784.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|392883818|gb|AFM90741.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCSERWKA 51
>gi|444726552|gb|ELW67081.1| High mobility group protein B1 [Tupaia chinensis]
Length = 126
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C EE KKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCWEEDKKKHPDASVSFSEFSKKCSERWKT 51
>gi|444725105|gb|ELW65684.1| High mobility group protein B1 [Tupaia chinensis]
Length = 166
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+Y FFVQ C EEHKK+HP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYTFFVQTCWEEHKKQHPDASVNFSEFSKKCSERWKT 39
>gi|444708344|gb|ELW49421.1| High mobility group protein B1 [Tupaia chinensis]
Length = 302
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 32/36 (88%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YAFFVQ C+EEHKK+HP +V F+EFSKKC+ERWK
Sbjct: 15 SYAFFVQTCQEEHKKEHPGVSVNFSEFSKKCSERWK 50
>gi|170784871|ref|NP_001116308.1| wu:fk52f12 [Danio rerio]
Length = 213
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKK PE V F+EFSK+C+ RWK+
Sbjct: 15 AYAYFVQTCREEHKKKSPEIPVSFSEFSKRCSGRWKA 51
>gi|351706098|gb|EHB09017.1| E3 ubiquitin-protein ligase RFWD2 [Heterocephalus glaber]
Length = 734
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + + AFFVQ CREEHKKKHP+ +V F+E KKC+ERWK+
Sbjct: 8 KLRGRMSSCAFFVQTCREEHKKKHPDTSVNFSELPKKCSERWKT 51
>gi|201066437|gb|ACH92570.1| high-mobility group protein 1-like 1 (predicted) [Otolemur
garnettii]
Length = 210
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 31/35 (88%)
Query: 13 AFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AFFVQ C EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 17 AFFVQTCWEEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|354485801|ref|XP_003505070.1| PREDICTED: high mobility group protein B1-like [Cricetulus
griseus]
Length = 198
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKH + +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKHLDFSVNFSEFSKKCSERWKT 51
>gi|392883584|gb|AFM90624.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+C ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQCPERWKA 51
>gi|426338818|ref|XP_004033369.1| PREDICTED: nuclear autoantigen Sp-100-like [Gorilla gorilla
gorilla]
Length = 205
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 37/44 (84%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL ++ ++YAFFVQ C+EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 8 KLRVEMLSYAFFVQTCQEEHKKKNPDASVKFSEFLKKCSEMWKT 51
>gi|344254860|gb|EGW10964.1| High mobility group protein B1 [Cricetulus griseus]
Length = 186
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKH + +V F+EFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCREEHKKKHLDFSVNFSEFSKKCSERWKT 39
>gi|281339988|gb|EFB15572.1| hypothetical protein PANDA_018974 [Ailuropoda melanoleuca]
Length = 212
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ C+EEHKKK P+ +V F+EFSKKC+E WK+
Sbjct: 8 KLRGKMSSYAFFVQTCQEEHKKKQPDASVNFSEFSKKCSEMWKT 51
>gi|301786997|ref|XP_002928914.1| PREDICTED: high mobility group protein B1-like [Ailuropoda
melanoleuca]
Length = 228
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ C+EEHKKK P+ +V F+EFSKKC+E WK+
Sbjct: 8 KLRGKMSSYAFFVQTCQEEHKKKQPDASVNFSEFSKKCSEMWKT 51
>gi|221220244|gb|ACM08783.1| High mobility group protein B3 [Salmo salar]
Length = 69
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 30/36 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
AYA+FVQ CREEHKKK PE V FAEFSKKC+ RWK
Sbjct: 15 AYAYFVQTCREEHKKKSPEIPVNFAEFSKKCSGRWK 50
>gi|444732125|gb|ELW72437.1| High mobility group protein B1 [Tupaia chinensis]
Length = 106
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFF+Q CREEHKKKHP+ +V+F+EF KK +ERW++
Sbjct: 15 SYAFFLQTCREEHKKKHPDASVIFSEFPKKYSERWEA 51
>gi|351707903|gb|EHB10822.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 157
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 30/37 (81%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+ AF VQ CREEHKKKHP+ + F+E SKKC+ERWK+
Sbjct: 23 SRAFLVQTCREEHKKKHPDSSANFSELSKKCSERWKT 59
>gi|27466905|gb|AAO12859.1| high mobility group protein [Branchiostoma belcheri tsingtauense]
Length = 164
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAP 61
+NK + AYA FVQ CR EH+KK+P + VVF EFS+KCA RWK+ +N ++F
Sbjct: 5 KNKPKGKMSAYACFVQECRREHEKKYPNKQVVFTEFSQKCASRWKT---MNDDEKKRFQV 61
Query: 62 VFLTFLSRMKDSILFCVNPVLAVGSR 87
+ R + ++ V P A G R
Sbjct: 62 LAEADKRRYEQNMAKYVPPKGAEGGR 87
>gi|349804477|gb|AEQ17711.1| putative high mobility group protein-1 [Hymenochirus curtipes]
Length = 143
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKK HP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAYFVQTCREEHKK-HPDASVNFSEFSKKCSERWKT 50
>gi|395753165|ref|XP_003779555.1| PREDICTED: high mobility group protein B1-like [Pongo abelii]
Length = 215
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C+EE KKKHP+ +V F+EFSK C+ERWK+
Sbjct: 15 SYAFFVQTCQEEKKKKHPDASVNFSEFSKTCSERWKT 51
>gi|440896783|gb|ELR48616.1| High mobility group protein B1, partial [Bos grunniens mutus]
Length = 165
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 34/38 (89%)
Query: 10 IAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
++YAFFVQ C+EEH+KKH + +V F+EFSKKC+ERWK+
Sbjct: 5 LSYAFFVQTCQEEHRKKHRDVSVNFSEFSKKCSERWKT 42
>gi|351698285|gb|EHB01204.1| High mobility group protein B1 [Heterocephalus glaber]
Length = 215
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C E+HKKKHP+ +V F+EFSKK +ERWK+
Sbjct: 15 SYAFFVQTCGEDHKKKHPDASVNFSEFSKKGSERWKT 51
>gi|20138433|sp|Q9UGV6.1|HMGLX_HUMAN RecName: Full=Putative high mobility group protein 1-like 10;
Short=HMG-1L10
Length = 211
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + ++AFF Q CRE HKKKHP+ +V +EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSHAFFGQTCREAHKKKHPDASVNLSEFSKKCSERWKT 51
>gi|291392907|ref|XP_002712835.1| PREDICTED: high-mobility group box 1 [Oryctolagus cuniculus]
Length = 208
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+Y FFVQ C E+HKK+HP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYTFFVQTCPEKHKKRHPDASVNFSEFSKKCSERWKT 51
>gi|547652|sp|P36194.2|HMGB1_CHICK RecName: Full=High mobility group protein B1; AltName: Full=High
mobility group protein 1; Short=HMG-1
gi|391636|dbj|BAA03260.1| HMG-1 [Gallus gallus]
Length = 201
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKK +PE V FAEFSKKC+ERWK+
Sbjct: 15 AYAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKT 50
>gi|410980460|ref|XP_003996595.1| PREDICTED: high mobility group protein B1-like, partial [Felis
catus]
Length = 165
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA FVQ CREEH+KKHP+ +V F+ FSK+C+ERW++
Sbjct: 17 SYALFVQTCREEHEKKHPDASVDFSGFSKRCSERWRT 53
>gi|387914026|gb|AFK10622.1| high mobility group box 3 [Callorhinchus milii]
Length = 210
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKK+P+ V F++FSK+C+ERWK+
Sbjct: 22 SYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKT 58
>gi|392877702|gb|AFM87683.1| high mobility group box 3 [Callorhinchus milii]
Length = 203
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 33/37 (89%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ CREEHKKK+P+ V F++FSK+C+ERWK+
Sbjct: 15 SYAYFVQTCREEHKKKNPDVPVNFSDFSKRCSERWKT 51
>gi|7439867|pir||S68823 HMG1 protein homolog, 6K - mouse
Length = 54
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C EE KKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCPEELKKKHPDASVNFSEFSKKCSERWKT 51
>gi|444730910|gb|ELW71281.1| High mobility group protein B2 [Tupaia chinensis]
Length = 153
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKK P +V F EF KKC+ERWK+
Sbjct: 15 SYAFFVQTCREEHKKKDPNSSVNFTEFFKKCSERWKT 51
>gi|221220328|gb|ACM08825.1| High mobility group protein B3 [Salmo salar]
Length = 203
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHK K+PE V F+EFSKKC+ RWK+
Sbjct: 15 AYAYFVQTCREEHKNKNPEIPVNFSEFSKKCSGRWKT 51
>gi|332815636|ref|XP_003309551.1| PREDICTED: nuclear autoantigen Sp-100-like [Pan troglodytes]
Length = 205
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 36/44 (81%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + ++YAFFVQ C+EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 8 KLRGEMLSYAFFVQTCQEEHKKKNPDASVKFSEFLKKCSEMWKT 51
>gi|344253440|gb|EGW09544.1| High mobility group protein B1 [Cricetulus griseus]
Length = 169
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ C EEHKKKHP+ +V F+E KKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCWEEHKKKHPDASVNFSELLKKCSERWKT 51
>gi|62647362|ref|XP_575506.1| PREDICTED: high mobility group protein B1-like [Rattus
norvegicus]
gi|293346835|ref|XP_001060814.2| PREDICTED: high mobility group protein B1-like isoform 1 [Rattus
norvegicus]
Length = 214
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
++AFFVQ CREEHKKKH +V F+EFSKKC+ERWK+
Sbjct: 15 SHAFFVQTCREEHKKKHLNASVNFSEFSKKCSERWKT 51
>gi|296199401|ref|XP_002747150.1| PREDICTED: high mobility group protein B1-like [Callithrix
jacchus]
Length = 209
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ C EE KKKHP+ + F+EFSKKC+ERWK+
Sbjct: 7 KKLRGKMSSYAFFVQTCCEEPKKKHPDASASFSEFSKKCSERWKT 51
>gi|444730109|gb|ELW70504.1| High mobility group protein B1 [Tupaia chinensis]
Length = 208
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V F+ FSKK +E+WK+
Sbjct: 3 SYAFFVQTCREEHKKKHPDASVNFSGFSKKRSEKWKT 39
>gi|444518919|gb|ELV12461.1| High mobility group protein B3 [Tupaia chinensis]
Length = 185
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AY FFVQ CRE+HKKK+PE V FAEFSKK +ERWK+
Sbjct: 15 AYTFFVQTCREKHKKKNPEVPVKFAEFSKKGSERWKT 51
>gi|444732714|gb|ELW72989.1| Enkurin [Tupaia chinensis]
Length = 362
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ C EE KKKH + +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCWEEPKKKHADASVNFSEFSKKCSERWKT 51
>gi|308153455|sp|Q3SYE8.2|HMG3L_HUMAN RecName: Full=Putative high mobility group protein B3-like-1;
AltName: Full=High mobility group protein 4-like;
AltName: Full=High mobility group protein B3 pseudogene
1
Length = 73
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + A+AFFVQ CREEHKK +PE V FAEFSKKC+ERWK+
Sbjct: 8 KLRGKMSAFAFFVQTCREEHKK-NPEVPVNFAEFSKKCSERWKT 50
>gi|51858856|gb|AAH81424.1| Hmgb3b protein [Danio rerio]
Length = 166
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FV+ CREEH KK+P V F+EFSKKC+ERWK+
Sbjct: 15 AYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKT 51
>gi|62955511|ref|NP_001017769.1| high mobility group protein B3 [Danio rerio]
gi|62202670|gb|AAH93186.1| High-mobility group box 3b [Danio rerio]
gi|182890656|gb|AAI64996.1| Hmgb3b protein [Danio rerio]
Length = 198
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FV+ CREEH KK+P V F+EFSKKC+ERWK+
Sbjct: 15 AYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKT 51
>gi|344239645|gb|EGV95748.1| High mobility group protein B1 [Cricetulus griseus]
Length = 119
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAE---RWKSSRIVNPFVGR 57
+YAFFVQ C+EEHKKKHP+ +V F+EFSKKC+E + + +V P VG
Sbjct: 3 SYAFFVQTCQEEHKKKHPDASVNFSEFSKKCSESIAQKSKNTLVCPLVGE 52
>gi|444729656|gb|ELW70065.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C+EEHKKKHP+ +V F+E KKC+ERWK+
Sbjct: 15 SYAFFVQTCQEEHKKKHPDASVNFSECVKKCSERWKT 51
>gi|392876622|gb|AFM87143.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V +EFSK+C+ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDSSEFSKQCSERWKA 51
>gi|444729655|gb|ELW70064.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C+EEHKKKHP+ +V F+E KKC+ERWK+
Sbjct: 15 SYAFFVQTCQEEHKKKHPDASVNFSECLKKCSERWKT 51
>gi|344244771|gb|EGW00875.1| High mobility group protein B1 [Cricetulus griseus]
Length = 109
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHKKKHP+ +V +EFS KC+ER K+
Sbjct: 15 SYAFFVQTCREEHKKKHPDASVNLSEFSNKCSERRKT 51
>gi|426392256|ref|XP_004062472.1| PREDICTED: putative high mobility group protein B1-like 1-like
[Gorilla gorilla gorilla]
Length = 198
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA+FVQ C+EEHKK HP+ +V F+EFSKKC+ERWK+
Sbjct: 3 SYAYFVQTCQEEHKK-HPDASVNFSEFSKKCSERWKT 38
>gi|112419177|gb|AAI22328.1| Hmgb3a protein [Danio rerio]
Length = 86
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 30/37 (81%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ CREEHKKK PE V +EFSK+C+ RWK+
Sbjct: 15 AYAYFVQTCREEHKKKSPEIPVSLSEFSKRCSGRWKA 51
>gi|395850653|ref|XP_003797893.1| PREDICTED: uncharacterized protein LOC100942737 [Otolemur
garnettii]
Length = 633
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/37 (67%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
++AFFVQ CREEHKK HP+ +V F+EFSKKC ER K+
Sbjct: 439 SFAFFVQTCREEHKK-HPDASVNFSEFSKKCLERCKT 474
>gi|392876202|gb|AFM86933.1| high mobility group protein [Callorhinchus milii]
Length = 213
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ REEHKKKHP+ +V F+EFSK+ +ERWK+
Sbjct: 15 SYAFFVQNSREEHKKKHPDSSVDFSEFSKQRSERWKA 51
>gi|395857418|ref|XP_003801091.1| PREDICTED: high mobility group protein B1-like [Otolemur
garnettii]
Length = 197
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + + AFFVQ EEHKKKHP +V F+EFSKKC+ERWK+
Sbjct: 50 KLRGKMSSCAFFVQTSWEEHKKKHPGASVTFSEFSKKCSERWKT 93
>gi|444721179|gb|ELW61931.1| High mobility group protein B1 [Tupaia chinensis]
Length = 212
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREE KKKHP+ +V F+EFSK C+ER K+
Sbjct: 15 SYAFFVQTCREEPKKKHPDASVNFSEFSKTCSERGKT 51
>gi|444517137|gb|ELV11379.1| High mobility group protein B1 [Tupaia chinensis]
Length = 204
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ +EEHKK+HP+ +V F+EF KKC+E+WK+
Sbjct: 15 SYAFFVQTFQEEHKKQHPDASVSFSEFPKKCSEKWKA 51
>gi|444523921|gb|ELV13661.1| High mobility group protein B1 [Tupaia chinensis]
Length = 226
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 30/35 (85%)
Query: 13 AFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
A FVQ CREEH+K HP+ ++ F+EFSK+C+ERWK+
Sbjct: 5 ASFVQTCREEHRKTHPDASINFSEFSKECSERWKT 39
>gi|194666188|ref|XP_875720.3| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|297473608|ref|XP_002686711.1| PREDICTED: high mobility group protein B2 [Bos taurus]
gi|296488702|tpg|DAA30815.1| TPA: high-mobility group box 2-like [Bos taurus]
Length = 283
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 16 VQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+ CREEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 94 INTCREEHKKKHPDSSVNFAEFSKKCSERWKT 125
>gi|441618163|ref|XP_003271355.2| PREDICTED: high mobility group protein B3-like [Nomascus
leucogenys]
Length = 206
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREEHKKK+PE V FAEFSKK +ER K+
Sbjct: 21 AYAFFVQTCREEHKKKNPEVPVNFAEFSKKWSERCKT 57
>gi|339250984|ref|XP_003372975.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316969210|gb|EFV53345.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 599
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 15 YGFFVKMCYEEHKKKYPSENVQVTEISKKCSEKWKT 50
>gi|324526583|gb|ADY48692.1| High mobility group protein 1.2, partial [Ascaris suum]
Length = 248
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 56 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 91
>gi|90103305|gb|ABD85497.1| high mobility group box 1-like [Ictalurus punctatus]
Length = 182
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 17 QVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Q CREEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 1 QTCREEHKKKHPDTSVNFSEFSKKCSERWKT 31
>gi|148703464|gb|EDL35411.1| mCG50005 [Mus musculus]
Length = 206
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YA FV+ C EEHKKKHP+ +V F+ FSKKC+ERW +
Sbjct: 15 SYALFVKTCWEEHKKKHPDASVNFSGFSKKCSERWNT 51
>gi|71986268|ref|NP_001022599.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
gi|373219053|emb|CCD83370.1| Protein HMG-1.2, isoform b [Caenorhabditis elegans]
Length = 234
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 51 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 86
>gi|17553928|ref|NP_498375.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
gi|21903502|sp|Q09390.2|HMG12_CAEEL RecName: Full=High mobility group protein 1.2
gi|3702828|gb|AAC78599.1| high mobility group protein 1.2 [Caenorhabditis elegans]
gi|373219052|emb|CCD83369.1| Protein HMG-1.2, isoform a [Caenorhabditis elegans]
Length = 235
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 52 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 87
>gi|71986275|ref|NP_001022600.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
gi|373219054|emb|CCD83371.1| Protein HMG-1.2, isoform c [Caenorhabditis elegans]
Length = 233
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 52 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 87
>gi|308499102|ref|XP_003111737.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
gi|308239646|gb|EFO83598.1| CRE-HMG-1.2 protein [Caenorhabditis remanei]
Length = 238
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 54 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 89
>gi|268571579|ref|XP_002641089.1| C. briggsae CBR-HMG-1.2 protein [Caenorhabditis briggsae]
Length = 239
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 54 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 89
>gi|395847762|ref|XP_003796535.1| PREDICTED: high mobility group protein B3-like [Otolemur
garnettii]
Length = 255
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
A AFFVQ CR+EHKKK+PE V FAEFSKKC+ RW++
Sbjct: 39 ACAFFVQTCRKEHKKKNPEVPVNFAEFSKKCSLRWEA 75
>gi|341879743|gb|EGT35678.1| CBN-HMG-1.2 protein [Caenorhabditis brenneri]
Length = 235
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 54 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 89
>gi|170591488|ref|XP_001900502.1| High mobility group protein 1.2 [Brugia malayi]
gi|158592114|gb|EDP30716.1| High mobility group protein 1.2, putative [Brugia malayi]
Length = 235
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 34 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 69
>gi|444526057|gb|ELV14266.1| High mobility group protein B1 [Tupaia chinensis]
Length = 166
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 30/37 (81%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFF Q CRE +KKKH + +V F+EFSKKC ERWK+
Sbjct: 3 SYAFFGQTCREAYKKKHSDASVNFSEFSKKCPERWKT 39
>gi|397502952|ref|XP_003822100.1| PREDICTED: high mobility group protein B3-like [Pan paniscus]
gi|410056873|ref|XP_003317692.2| PREDICTED: high mobility group protein B3-like [Pan troglodytes]
Length = 221
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFF Q CREEHKKK+PE V F EFSKKC+E+ K+
Sbjct: 35 AYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKT 71
>gi|119623033|gb|EAX02628.1| hCG1644442 [Homo sapiens]
Length = 201
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFF Q CREEHKKK+PE V F EFSKKC+E+ K+
Sbjct: 15 AYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKT 51
>gi|402889604|ref|XP_003908101.1| PREDICTED: high mobility group protein B1-like [Papio anubis]
Length = 198
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ C+EEH+KK+P+ +V F+EF KKC E WK+
Sbjct: 8 KLRSEMSSYAFFVQTCQEEHEKKNPDASVDFSEFVKKCLEMWKT 51
>gi|25395797|pir||E88479 protein F47D12.4 [imported] - Caenorhabditis elegans
Length = 202
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 21 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 56
>gi|444722397|gb|ELW63094.1| High mobility group protein B1 [Tupaia chinensis]
Length = 178
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
Query: 11 AYAFFVQVCREEHKKKHPEENVV-FAEFSKKCAERWKS 47
+YAFFVQ C+EEHKK HP+ +V F+EFSKKC+ERWK+
Sbjct: 15 SYAFFVQTCQEEHKK-HPDASVNNFSEFSKKCSERWKT 51
>gi|444705868|gb|ELW47253.1| High mobility group protein B1 [Tupaia chinensis]
Length = 182
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 13 AFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+FF Q CR+EHKKKHP+ +V F+EFSKK +ERWK+
Sbjct: 5 SFFEQTCRKEHKKKHPDASVNFSEFSKKGSERWKT 39
>gi|312075672|ref|XP_003140521.1| high mobility group protein 1.2 [Loa loa]
gi|307764316|gb|EFO23550.1| high mobility group protein 1.2 [Loa loa]
Length = 211
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 16 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 51
>gi|444723313|gb|ELW63971.1| High mobility group protein B1 [Tupaia chinensis]
Length = 171
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%), Gaps = 3/40 (7%)
Query: 11 AYAFFVQVCREEHKKKHPEENVV---FAEFSKKCAERWKS 47
+YAFFVQ C EEHKKK PE + F+EFSKKC+ERWK+
Sbjct: 3 SYAFFVQTCWEEHKKKPPEASTSCFNFSEFSKKCSERWKT 42
>gi|432104603|gb|ELK31215.1| High mobility group protein B1 [Myotis davidii]
Length = 201
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%)
Query: 13 AFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AFFVQ +EHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 17 AFFVQTYWDEHKKKHPDASVNFSEFSKKCSERWKT 51
>gi|444707796|gb|ELW48970.1| High mobility group protein B1 [Tupaia chinensis]
Length = 224
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ C E HKKK + +V F+EFSKKC+ERWK+
Sbjct: 8 KLRGKMSSYAFFVQTCWEGHKKKQLDASVNFSEFSKKCSERWKT 51
>gi|355565174|gb|EHH21663.1| hypothetical protein EGK_04785, partial [Macaca mulatta]
Length = 201
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
KL + A+AFFVQ C +EHK++HP +V F+EFS+KC ERWK
Sbjct: 8 KLRGKMSAHAFFVQTCWKEHKQQHPAASVNFSEFSQKCLERWK 50
>gi|195977121|gb|ACG63669.1| high-mobility group box 1 (predicted) [Otolemur garnettii]
Length = 227
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 13 AFFVQVCR-EEHKKKHPEENVVFAEFSKKCAERWKS 47
AFFVQ CR EE +KKHP+ +V F+EFSKKC+ERWK+
Sbjct: 17 AFFVQTCRGEEREKKHPDASVNFSEFSKKCSERWKT 52
>gi|444520312|gb|ELV12956.1| High mobility group protein B1 [Tupaia chinensis]
Length = 150
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFVQ REEHKK+H + +V F+EFSKKC+ERWK+
Sbjct: 4 YTFFVQTFREEHKKEHSDVSVNFSEFSKKCSERWKT 39
>gi|392339776|ref|XP_002726360.2| PREDICTED: high mobility group protein B1-like [Rattus norvegicus]
Length = 253
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 31/37 (83%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+Y FFVQ EEHKK+HP+ +V F+EFSKKC+ERWK+
Sbjct: 73 SYTFFVQTW-EEHKKQHPDASVNFSEFSKKCSERWKT 108
>gi|402583047|gb|EJW76991.1| hypothetical protein WUBG_12099 [Wuchereria bancrofti]
Length = 170
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+E+WK+
Sbjct: 16 YGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKT 51
>gi|444714927|gb|ELW55801.1| High mobility group protein B1 [Tupaia chinensis]
Length = 167
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 32/37 (86%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ C+EEHKKKH + +V F+EFS++ +ERWK+
Sbjct: 15 SYAFFVQTCQEEHKKKHLDASVNFSEFSEELSERWKT 51
>gi|444727550|gb|ELW68036.1| High mobility group protein B1 [Tupaia chinensis]
Length = 149
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
++AFFVQ CRE+HKK HP+ +V F+EF+KKC+ RWK
Sbjct: 15 SHAFFVQTCREKHKK-HPDASVNFSEFAKKCSGRWK 49
>gi|339242839|ref|XP_003377345.1| high mobility group protein 1.2 [Trichinella spiralis]
gi|316973861|gb|EFV57410.1| high mobility group protein 1.2 [Trichinella spiralis]
Length = 229
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y FFV++C EEHKKK+P ENV E SKKC+ +WK+
Sbjct: 44 YGFFVKMCYEEHKKKYPNENVQVTEVSKKCSAKWKT 79
>gi|296470699|tpg|DAA12814.1| TPA: high mobility group box 3-like [Bos taurus]
Length = 197
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
A+AFFVQ+CR++HKK P+ V FAEFSKKC+ERWK+
Sbjct: 15 AHAFFVQMCRKKHKK-TPKVPVNFAEFSKKCSERWKT 50
>gi|440912073|gb|ELR61675.1| Putative high mobility group protein B3-like protein, partial
[Bos grunniens mutus]
Length = 190
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 32/37 (86%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
A+AFFVQ+CR++HKK P+ V FAEFSKKC+ERWK+
Sbjct: 15 AHAFFVQMCRKKHKK-TPKVPVNFAEFSKKCSERWKT 50
>gi|426397135|ref|XP_004064781.1| PREDICTED: high mobility group protein B3-like [Gorilla gorilla
gorilla]
Length = 221
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 29/37 (78%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFF Q CREEHKKK+ E V F EFSKKC+E+ K+
Sbjct: 35 AYAFFAQTCREEHKKKNSEVPVNFVEFSKKCSEKRKT 71
>gi|444513275|gb|ELV10301.1| High mobility group protein B1 [Tupaia chinensis]
Length = 161
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 30/35 (85%), Gaps = 1/35 (2%)
Query: 13 AFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AFFVQ +EEHKK HP+ +V F+EFSKKC+ERWK+
Sbjct: 17 AFFVQTFQEEHKK-HPDASVNFSEFSKKCSERWKT 50
>gi|47551063|ref|NP_999708.1| high mobility group protein 1 homolog [Strongylocentrotus
purpuratus]
gi|729735|sp|P40644.1|HMGH_STRPU RecName: Full=High mobility group protein 1 homolog
gi|161521|gb|AAA91277.1| high mobility group 1 protein [Strongylocentrotus purpuratus]
Length = 200
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 26/37 (70%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA+FVQ R EH K HP V FAEFSK C+ RWK+
Sbjct: 17 AYAYFVQDSRAEHGKNHPNSPVRFAEFSKDCSARWKA 53
>gi|32335|emb|CAA78938.1| HMG2B [Homo sapiens]
Length = 186
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/28 (78%), Positives = 26/28 (92%)
Query: 20 REEHKKKHPEENVVFAEFSKKCAERWKS 47
REEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 1 REEHKKKHPDSSVNFAEFSKKCSERWKT 28
>gi|444730956|gb|ELW71325.1| High mobility group protein B2 [Tupaia chinensis]
Length = 273
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 17 QVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+ C EEHKKKHP+ +V F EFSKKC+ERWK+
Sbjct: 92 KACLEEHKKKHPDSSVNFPEFSKKCSERWKT 122
>gi|444723820|gb|ELW64450.1| MKL/myocardin-like protein 1 [Tupaia chinensis]
Length = 1207
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
++AFFVQ C EEHKK + + +V +EFSKKC+ERWK+
Sbjct: 3 SFAFFVQSCWEEHKK-NLDASVNLSEFSKKCSERWKT 38
>gi|444727982|gb|ELW68448.1| High mobility group protein B1 [Tupaia chinensis]
Length = 165
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ E+HK+KHP+ +V F+EFSKK ERWK+
Sbjct: 3 SYAFFVQTFWEKHKEKHPDASVDFSEFSKKFLERWKT 39
>gi|441669023|ref|XP_004092092.1| PREDICTED: high mobility group protein B1-like [Nomascus
leucogenys]
Length = 204
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 4 KLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
KL + +YAFFVQ C+ HKKK+P+ +V +EF KKC+E WK+
Sbjct: 8 KLRGEMSSYAFFVQTCQAVHKKKNPDASVNLSEFLKKCSEMWKT 51
>gi|194767499|ref|XP_001965853.1| GF20526 [Drosophila ananassae]
gi|190618453|gb|EDV33977.1| GF20526 [Drosophila ananassae]
Length = 98
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 24/26 (92%)
Query: 13 AFFVQVCREEHKKKHPEENVVFAEFS 38
A FVQ+CREEHKKKHP+E V+FAEFS
Sbjct: 73 ADFVQICREEHKKKHPDETVIFAEFS 98
>gi|444727393|gb|ELW67891.1| High mobility group protein B3 [Tupaia chinensis]
Length = 102
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAFFVQ CREE KKK PE V FAEFS K ++RWK+
Sbjct: 15 AYAFFVQTCREEDKKKDPEILVNFAEFS-KSSKRWKT 50
>gi|444732758|gb|ELW73033.1| High mobility group protein B2 [Tupaia chinensis]
Length = 234
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 25/27 (92%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWKS 47
EEHKKKHP+ +V FAEFSKKC+ERWK+
Sbjct: 59 EEHKKKHPDSSVNFAEFSKKCSERWKT 85
>gi|56757397|gb|AAW26868.1| unknown [Schistosoma japonicum]
Length = 252
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIV 51
AYA F+Q R +HKKKHP + F FSK+C+E+WK S ++
Sbjct: 14 AYALFLQSMRADHKKKHPNATLDFKSFSKECSEQWKVSYVL 54
>gi|444729826|gb|ELW70229.1| High mobility group protein B3 [Tupaia chinensis]
Length = 108
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 14 FFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
F + CREEHKKK E V FAEFSKKC+ERWK+
Sbjct: 19 LFDETCREEHKKKDLEVPVNFAEFSKKCSERWKT 52
>gi|351700697|gb|EHB03616.1| High mobility group protein B1, partial [Heterocephalus glaber]
Length = 178
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
+YAFFVQ C EHKKK P+ +V F+ FS+K +ERWK
Sbjct: 6 SYAFFVQPCPVEHKKKRPDASVNFSAFSRKFSERWK 41
>gi|407264363|ref|XP_358238.4| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 164
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 25/27 (92%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWKS 47
EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 5 EEHKKKHPDASVNFSEFSKKCSERWKT 31
>gi|296221849|ref|XP_002756934.1| PREDICTED: high mobility group protein B1-like [Callithrix
jacchus]
Length = 203
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAF VQ C+EEHKK+ P+ +EFSK C+ERWK+
Sbjct: 16 SYAFLVQTCQEEHKKQQPD----ASEFSKTCSERWKT 48
>gi|83004259|ref|XP_915281.1| PREDICTED: high mobility group protein B1-like [Mus musculus]
Length = 188
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 25/27 (92%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWKS 47
EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 5 EEHKKKHPDASVNFSEFSKKCSERWKT 31
>gi|148699412|gb|EDL31359.1| mCG48752 [Mus musculus]
Length = 240
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 25/27 (92%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWKS 47
EEHKKKHP+ +V F+EFSKKC+ERWK+
Sbjct: 57 EEHKKKHPDASVNFSEFSKKCSERWKT 83
>gi|256091012|ref|XP_002581447.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 59
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
AYA F+Q R +HKKKHP + F FSK+C+E+WK
Sbjct: 23 AYAAFLQSMRADHKKKHPNVTLDFKSFSKECSEQWK 58
>gi|1083056|pir||B61611 nonhistone chromosomal protein HMG-2 - bovine (fragments)
Length = 186
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 7/45 (15%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
NK + +YAFFVQ REEHKKKHP+ +V F +ERWK+
Sbjct: 6 NKPRGKMSSYAFFVQTSREEHKKKHPDASVNF-------SERWKT 43
>gi|29841393|gb|AAP06425.1| SJCHGC00614 protein [Schistosoma japonicum]
gi|66275794|gb|AAY44044.1| high mobility group B1 [Schistosoma japonicum]
gi|226472340|emb|CAX77206.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472342|emb|CAX77207.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472344|emb|CAX77208.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472346|emb|CAX77209.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472348|emb|CAX77210.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472350|emb|CAX77211.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472352|emb|CAX77212.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472354|emb|CAX77213.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472356|emb|CAX77214.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472358|emb|CAX77215.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472360|emb|CAX77216.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472362|emb|CAX77217.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472364|emb|CAX77218.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472366|emb|CAX77219.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472368|emb|CAX77220.1| High mobility group protein DSP1 [Schistosoma japonicum]
gi|226472370|emb|CAX77221.1| High mobility group protein DSP1 [Schistosoma japonicum]
Length = 176
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA F+Q R +HKKKHP + F FSK+C+E+WK+
Sbjct: 14 AYALFLQSMRADHKKKHPNATLDFKSFSKECSEQWKN 50
>gi|46326208|gb|AAS88235.1| high mobility group B1 protein [Schistosoma haematobium]
Length = 107
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA F+Q R +HKKKHP + F FSK+C+E+WK+
Sbjct: 14 AYAAFLQSMRADHKKKHPNVTLDFKAFSKECSEQWKN 50
>gi|256089447|ref|XP_002580821.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|40365359|gb|AAR85353.1| high mobility group B1 protein [Schistosoma mansoni]
gi|66275796|gb|AAY44045.1| high mobility group B1 [Schistosoma mansoni]
gi|360043524|emb|CCD78937.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 176
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA F+Q R +HKKKHP + F FSK+C+E+WK+
Sbjct: 14 AYAAFLQSMRADHKKKHPNVTLDFKSFSKECSEQWKN 50
>gi|256082821|ref|XP_002577651.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
gi|350644470|emb|CCD60807.1| SWI/SNF-related chromatin binding protein [Schistosoma mansoni]
Length = 116
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYA F+Q R HKKKHP + F FSK+C+E+WK+
Sbjct: 14 AYAAFLQSMRANHKKKHPNVTLDFKSFSKECSEQWKN 50
>gi|355757371|gb|EHH60896.1| hypothetical protein EGM_18788, partial [Macaca fascicularis]
Length = 189
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 7 MQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
++G + +Q EEHKK+ P+ +V F+EF KKC ERWK+
Sbjct: 9 LKGKMSSHHMQTSWEEHKKQQPDASVNFSEFPKKCLERWKT 49
>gi|397517515|ref|XP_003828955.1| PREDICTED: high mobility group protein B1-like [Pan paniscus]
Length = 86
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAPVFLTFLSRMK 71
YA F+ C++EHKK+HP+ +V+F+E SKKC I + G R
Sbjct: 4 YALFMHTCQKEHKKQHPDASVLFSECSKKC-----QRGIKGKYPGLYIDDFAKKLGERWN 58
Query: 72 DSILFCVNPVLAVGSRILEKFDE 94
D++ P +++ EK+++
Sbjct: 59 DTVADDKQPYEKKPAKLKEKYEK 81
>gi|149031021|gb|EDL86048.1| rCG37465 [Rattus norvegicus]
Length = 62
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 4/48 (8%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRK 58
+YAFFVQ E KK+H +++V F+EFSKKC+ + R P +G+K
Sbjct: 3 SYAFFVQTYTSERKKQHSDDSVNFSEFSKKCS----AQRGGRPCLGKK 46
>gi|358255365|dbj|GAA57072.1| high mobility group protein B1, partial [Clonorchis sinensis]
Length = 778
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
YA F+Q + KKKHP + F FSK+C+E+WK+
Sbjct: 555 YALFLQSMHADQKKKHPSVTLDFKTFSKECSEQWKN 590
>gi|349802605|gb|AEQ16775.1| putative high mobility group box 3 [Pipa carvalhoi]
Length = 149
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%)
Query: 22 EHKKKHPEENVVFAEFSKKCAERWK 46
EHKKK+PE V FAEFSKKC+ERWK
Sbjct: 1 EHKKKNPEIPVNFAEFSKKCSERWK 25
>gi|444732467|gb|ELW72759.1| High mobility group protein B2 [Tupaia chinensis]
Length = 175
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWKS 47
EEHK+KHP+ +V FAEFSKK ERWK+
Sbjct: 21 EEHKRKHPDSSVNFAEFSKKYWERWKT 47
>gi|444511314|gb|ELV09851.1| YTH domain family protein 3 [Tupaia chinensis]
Length = 622
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEF 37
+YAFFVQ C EEHKKKH + +V F+E
Sbjct: 15 SYAFFVQTCWEEHKKKHLDASVNFSEL 41
>gi|395526464|ref|XP_003765383.1| PREDICTED: high mobility group protein B4 [Sarcophilus harrisii]
Length = 207
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+Y F+ CR +HK++ P + F EFSK+C+E+WK+
Sbjct: 14 SYVHFLLNCRNKHKEQQPNAYINFKEFSKRCSEKWKT 50
>gi|19923236|ref|NP_003104.2| nuclear autoantigen Sp-100 isoform 2 [Homo sapiens]
gi|13878931|sp|P23497.3|SP100_HUMAN RecName: Full=Nuclear autoantigen Sp-100; AltName: Full=Lysp100b;
AltName: Full=Nuclear dot-associated Sp100 protein;
AltName: Full=Speckled 100 kDa
gi|3252911|gb|AAC39790.1| SP100-HMG nuclear autoantigen [Homo sapiens]
gi|119591334|gb|EAW70928.1| SP100 nuclear antigen, isoform CRA_b [Homo sapiens]
Length = 879
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 15 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
V C EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 694 LVDPC-EEHKKKNPDASVKFSEFLKKCSETWKT 725
>gi|386783721|gb|AFJ24755.1| high mobility group-2 [Schmidtea mediterranea]
Length = 192
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AY + Q REE+KKK+P+ V F E SK +E+WK+
Sbjct: 12 AYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKN 48
>gi|62822330|gb|AAY14879.1| unknown [Homo sapiens]
Length = 843
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 15 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
V C EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 658 LVDPC-EEHKKKNPDASVKFSEFLKKCSETWKT 689
>gi|119591335|gb|EAW70929.1| SP100 nuclear antigen, isoform CRA_c [Homo sapiens]
Length = 844
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 15 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
V C EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 659 LVDPC-EEHKKKNPDASVKFSEFLKKCSETWKT 690
>gi|119568092|gb|EAW47707.1| hCG1642266, isoform CRA_b [Homo sapiens]
Length = 121
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFA 60
AYAFF Q+CREEHKKK+PE ++ + + A R S +I + G F
Sbjct: 3 AYAFFGQMCREEHKKKNPEVSLSILQNFPRSALREFSPKIKSTNPGNSFG 52
>gi|18653894|gb|AAL77438.1|L79988_1 nuclear autoantigen, partial [Homo sapiens]
Length = 403
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 15 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
V C EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 218 LVDPC-EEHKKKNPDASVKFSEFLKKCSETWKT 249
>gi|23396868|sp|Q9N1Q6.1|SP100_GORGO RecName: Full=Nuclear autoantigen Sp-100; AltName: Full=Nuclear
dot-associated Sp100 protein; AltName: Full=Speckled
100 kDa
gi|7239185|gb|AAF43109.1|AF169947_1 SP100-HMG nuclear autoantigen, partial [Gorilla gorilla]
Length = 225
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 15 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
V C EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 43 LVDPC-EEHKKKNPDASVKFSEFLKKCSEMWKT 74
>gi|392332176|ref|XP_003752498.1| PREDICTED: uncharacterized protein LOC686084 [Rattus norvegicus]
Length = 1769
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 13 AFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AFF Q CR+EHK+ V F EF KK ERWK+
Sbjct: 16 AFFPQTCRKEHKRL-ASSPVNFREFXKKSPERWKT 49
>gi|392333867|ref|XP_001055923.3| PREDICTED: sperm motility kinase X-like [Rattus norvegicus]
gi|392354221|ref|XP_577560.4| PREDICTED: sperm motility kinase X-like [Rattus norvegicus]
Length = 739
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWKSSR 49
EE+K+K+ + +V +EFSKKC+ERWK+ R
Sbjct: 671 EENKRKYLDTSVNSSEFSKKCSERWKTMR 699
>gi|7206622|gb|AAF39781.1| SP100-HMG [Homo sapiens]
Length = 181
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWKS 47
EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 1 EEHKKKNPDASVKFSEFLKKCSETWKT 27
>gi|395732940|ref|XP_002813012.2| PREDICTED: nuclear autoantigen Sp-100-like [Pongo abelii]
Length = 263
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 15 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
V C EEHKKK+P+ +V F+EF KKC+E WK+
Sbjct: 79 LVDPC-EEHKKKNPDASVKFSEFLKKCSEIWKT 110
>gi|297265082|ref|XP_001112681.2| PREDICTED: nuclear autoantigen Sp-100 isoform 9 [Macaca mulatta]
Length = 838
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 15 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
V C EEH+KK+P+ +V F+EF KKC+E WK+
Sbjct: 660 LVDPC-EEHEKKNPDASVDFSEFVKKCSEMWKT 691
>gi|355766483|gb|EHH62519.1| hypothetical protein EGM_20887 [Macaca fascicularis]
Length = 198
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 13/37 (35%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AY FFVQ CREE +FSKKC+ERWK+
Sbjct: 15 AYVFFVQTCREE-------------QFSKKCSERWKT 38
>gi|355691926|gb|EHH27111.1| hypothetical protein EGK_17228 [Macaca mulatta]
Length = 196
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 13/37 (35%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AY FFVQ CREE FSKKC+ERWK+
Sbjct: 15 AYVFFVQTCREEQ-------------FSKKCSERWKT 38
>gi|53715127|ref|YP_101119.1| hypothetical protein BF3843 [Bacteroides fragilis YCH46]
gi|52217992|dbj|BAD50585.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 170
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 5 LNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAPVFL 64
+N++ + F VQ+ E ++K P+E E S K S + F G+K
Sbjct: 76 INVKEVEMDFSVQIVSSELRRKQPQEGFQAGEASTDFVNNLKRSNLEISFDGKKDN---- 131
Query: 65 TFLSRMKDSILFCVNPVLAVGSRILEKFDECLDYFGLR 102
SRM+ I F P+ SRI++++D+ + F ++
Sbjct: 132 ---SRMQVHIKFESKPIPEGLSRIIDEYDKTITPFSVQ 166
>gi|344252572|gb|EGW08676.1| High mobility group protein B1 [Cricetulus griseus]
Length = 114
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 16 VQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+Q CRE+ +KKH + +V F+EFSKK +ERWK+
Sbjct: 1 MQTCREK-RKKHQDASVNFSEFSKKVSERWKT 31
>gi|225718512|gb|ACO15102.1| High mobility group protein B2 [Caligus clemensi]
Length = 200
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERW 45
+ FF C EE++++HPEE + KC ERW
Sbjct: 17 FQFFTDTCLEEYRRRHPEEEDYLSRVRNKCQERW 50
>gi|14249024|gb|AAK57703.1| SP100 [Homo sapiens]
Length = 26
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWK 46
EEHKKK+P+ +V F+EF KKC+E WK
Sbjct: 1 EEHKKKNPDASVKFSEFLKKCSETWK 26
>gi|313217945|emb|CBY41316.1| unnamed protein product [Oikopleura dioica]
gi|313245828|emb|CBY34818.1| unnamed protein product [Oikopleura dioica]
Length = 200
Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+NK + AY +FV +E+H K +P + F EFSK C ++W++
Sbjct: 5 RNKPRGRTTAYGYFVVDEKEKHAKANPGVKINFGEFSKLCGQKWQT 50
>gi|383651510|ref|ZP_09961916.1| hypothetical protein SchaN1_39533 [Streptomyces chartreusis NRRL
12338]
Length = 637
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 28 PEENVVFAEFSKKCAERWKSSRIVNPFVGRKFA 60
PEE V+ EF + A+RW RI P+ GR FA
Sbjct: 356 PEEAVLLGEFGIEDADRWCWERISRPYAGRDFA 388
>gi|351698405|gb|EHB01324.1| High mobility group protein B3, partial [Heterocephalus glaber]
Length = 63
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 12 YAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
Y +Q+CRE+HK+K + V A FSKKC+ER K+
Sbjct: 11 YPLLMQMCREKHKQKILDIPVNCAAFSKKCSERQKT 46
>gi|14537821|gb|AAK66745.1| SP100-HMG [Papio anubis]
gi|14537827|gb|AAK66747.1| SP100-HMG [Macaca mulatta]
gi|14537833|gb|AAK66749.1| SP100-HMG [Macaca assamensis]
Length = 26
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWK 46
EEH+KK+P+ +V F+EF KKC+E WK
Sbjct: 1 EEHEKKNPDASVDFSEFVKKCSETWK 26
>gi|119601131|gb|EAW80725.1| hCG22229 [Homo sapiens]
Length = 212
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 6/37 (16%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+YAFFVQ CREEHK H + +V F++ +WK+
Sbjct: 3 SYAFFVQSCREEHKHHHSDASVNFSK------RKWKT 33
>gi|38018014|gb|AAR08136.1| high mobility group box protein HMGB2 [Suberites domuncula]
Length = 183
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AYAF+VQ R+ ++K + VVFA FS++CAE WK+
Sbjct: 16 AYAFYVQERRDIYRKNG--DTVVFAPFSQECAELWKN 50
>gi|14537824|gb|AAK66746.1| SP100-HMG [Chlorocebus aethiops]
Length = 26
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 21 EEHKKKHPEENVVFAEFSKKCAERWK 46
EEH+KK+P+ +V F+EF KKC+E WK
Sbjct: 1 EEHEKKNPDASVNFSEFVKKCSETWK 26
>gi|392351679|ref|XP_003750994.1| PREDICTED: high mobility group protein B2-like, partial [Rattus
norvegicus]
Length = 159
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 11 AYAFFVQVCREEHKK--KHPEENVVFAEFSKKCAERWKS 47
+ AFF Q CR+EHK+ P V F EF KK ERWK+
Sbjct: 14 SKAFFPQTCRKEHKRLASSP---VNFREFXKKSPERWKT 49
>gi|16081352|ref|NP_393680.1| iron ABC transporter ATP-binding protein [Thermoplasma acidophilum
DSM 1728]
gi|10639346|emb|CAC11348.1| FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC related protein
[Thermoplasma acidophilum]
Length = 246
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 2 QNKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAP 61
Q+ + ++G+ + F+++ + HP+E +V +EF+K+ E K+ + F+ R
Sbjct: 86 QSPVAVEGVRISTFLRIA---YSHLHPDEKIVISEFNKRIKEAMKTVGLDESFISRSVND 142
Query: 62 VFLTFLSRMKDSILFCVNPVLAVGSRILEKFDECLDYFGLRALA 105
F + R + IL + +L IL++ D LD LR +A
Sbjct: 143 GF-SGGERKRFEILQML--ILKPKMIILDEIDSGLDVDALRMVA 183
>gi|340370076|ref|XP_003383572.1| PREDICTED: high mobility group protein 1.2-like [Amphimedon
queenslandica]
Length = 211
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPE-ENVVFAEFSKKCAERWK 46
NK + AYAFFVQ +E PE +++ F EFSK C+E+WK
Sbjct: 10 NKPKGRTSAYAFFVQDMKE-----TPEGKSLKFTEFSKYCSEQWK 49
>gi|23396869|sp|Q9N1Q7.1|SP100_PANTR RecName: Full=Nuclear autoantigen Sp-100; AltName: Full=Nuclear
dot-associated Sp100 protein; AltName: Full=Speckled
100 kDa
gi|7239183|gb|AAF43108.1|AF169946_1 SP100-HMG nuclear autoantigen, partial [Pan troglodytes]
Length = 215
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 15 FVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
V C EEHKKK+P+ +V F+EF KK +E WK+
Sbjct: 49 LVDPC-EEHKKKNPDASVKFSEFLKKRSEMWKT 80
>gi|224077702|ref|XP_002305370.1| high mobility group family [Populus trichocarpa]
gi|222848334|gb|EEE85881.1| high mobility group family [Populus trichocarpa]
Length = 644
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
AY FF Q+ RE KK +P +VF E +K A++W +
Sbjct: 565 AYVFFSQMERENVKKSNP--GIVFGEITKALADKWNA 599
>gi|444731425|gb|ELW71779.1| High mobility group protein B3 [Tupaia chinensis]
Length = 112
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Query: 6 NMQGI--AYAFFVQVCREEHKKKH 27
N +G AYAFFVQ CREEHK+K+
Sbjct: 23 NPKGTLSAYAFFVQTCREEHKEKN 46
>gi|29290594|emb|CAD83017.1| bM168F16.1 (novel protein similar to high-mobility group box 1
(Hmgb1)) [Mus musculus]
gi|148699130|gb|EDL31077.1| mCG49535 [Mus musculus]
Length = 208
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 22 EHKKKHPEENVVFAEFSKKCAERWKS 47
EHK + + +V F+EFSKKC+ERWK+
Sbjct: 26 EHKTTYLDASVNFSEFSKKCSERWKT 51
>gi|67968790|dbj|BAE00752.1| unnamed protein product [Macaca fascicularis]
Length = 191
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 11 AYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWKS 47
+Y F+ R E K++ P V F EFS+KC+E+W+S
Sbjct: 17 SYIHFLLNYRNEFKEQQPNTYVGFKEFSRKCSEKWRS 53
>gi|72051831|ref|XP_792040.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
gi|115767180|ref|XP_001176807.1| PREDICTED: high mobility group protein 1 homolog
[Strongylocentrotus purpuratus]
Length = 204
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Query: 3 NKLNMQGIAYAFFVQVCREEHKKKHPEENVVFAEFSKKCAERWK 46
NK + AYA+FVQ R + E V F FSK+CA+RWK
Sbjct: 9 NKPRGRMSAYAYFVQDRRSKA-----EGQVNFTAFSKECADRWK 47
>gi|449672275|ref|XP_002166645.2| PREDICTED: uncharacterized protein LOC100203770 [Hydra
magnipapillata]
Length = 428
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 20 REEHKKKHPEENVVFAEFSKKCAERWKSSRIVNPFVGRKFAPV 62
RE KK P N VF +F + CA+ W ++ G F PV
Sbjct: 11 RELWIKKLPNANFVFTDFKRICAQHWPKDTVLKKVKGGSFVPV 53
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.328 0.140 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,536,140,870
Number of Sequences: 23463169
Number of extensions: 51125507
Number of successful extensions: 130760
Number of sequences better than 100.0: 639
Number of HSP's better than 100.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 130013
Number of HSP's gapped (non-prelim): 740
length of query: 105
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 32
effective length of database: 6,351,416,734
effective search space: 203245335488
effective search space used: 203245335488
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 69 (31.2 bits)