Query psy3270
Match_columns 655
No_of_seqs 459 out of 2739
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 20:46:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 1.4E-94 4.9E-99 812.0 64.2 547 1-644 50-605 (605)
2 3d2f_A Heat shock protein homo 100.0 2.6E-94 8.8E-99 815.1 61.7 556 1-646 49-629 (675)
3 2kho_A Heat shock protein 70; 100.0 3.4E-93 1.2E-97 800.8 56.9 546 1-643 50-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 2.4E-88 8.3E-93 754.6 47.1 503 1-586 51-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 9.4E-77 3.2E-81 656.4 47.5 457 1-576 49-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 1.6E-55 5.5E-60 475.1 39.7 332 1-415 70-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 4.4E-54 1.5E-58 462.6 39.5 330 1-414 65-394 (394)
8 4gni_A Putative heat shock pro 100.0 5.6E-53 1.9E-57 455.8 33.2 330 1-415 60-403 (409)
9 1dkg_D Molecular chaperone DNA 100.0 2.2E-51 7.4E-56 439.7 33.9 325 1-414 50-383 (383)
10 4e81_A Chaperone protein DNAK; 100.0 4.9E-40 1.7E-44 318.1 25.9 216 424-643 1-216 (219)
11 1u00_A HSC66, chaperone protei 100.0 3.4E-37 1.2E-41 301.6 27.4 214 427-644 1-214 (227)
12 1jce_A ROD shape-determining p 100.0 1.4E-33 4.8E-38 297.0 18.5 220 173-414 97-327 (344)
13 3n8e_A Stress-70 protein, mito 100.0 4.8E-33 1.7E-37 259.9 15.7 165 421-586 17-181 (182)
14 3h0x_A 78 kDa glucose-regulate 100.0 1.6E-30 5.5E-35 236.9 15.4 151 426-576 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 1.2E-30 3.9E-35 237.3 12.9 151 426-576 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 2E-30 6.7E-35 235.5 10.3 150 426-576 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 100.0 2.4E-28 8.1E-33 224.2 14.0 151 426-576 2-152 (152)
18 4a2a_A Cell division protein F 99.9 3.9E-26 1.3E-30 244.4 19.5 311 64-413 50-394 (419)
19 2ych_A Competence protein PILM 99.9 3.6E-24 1.2E-28 228.0 15.7 227 158-410 106-372 (377)
20 3h1q_A Ethanolamine utilizatio 99.9 2.1E-23 7.2E-28 211.8 18.6 194 158-410 79-272 (272)
21 1q5l_A Chaperone protein DNAK; 99.9 1.3E-22 4.3E-27 180.9 11.8 119 421-539 14-132 (135)
22 2fsj_A Hypothetical protein TA 99.9 1.1E-22 3.6E-27 213.1 12.2 203 172-411 120-343 (346)
23 1k8k_A ARP3, actin-like protei 99.8 2.2E-20 7.5E-25 201.4 13.7 227 171-411 107-386 (418)
24 2fxu_A Alpha-actin-1, actin, a 99.8 5.4E-20 1.8E-24 195.2 14.6 214 172-411 101-348 (375)
25 2zgy_A Plasmid segregation pro 99.7 1.2E-18 4E-23 180.8 7.3 204 172-410 96-319 (320)
26 4ehu_A Activator of 2-hydroxyi 99.6 5.3E-14 1.8E-18 142.6 20.5 182 197-414 69-256 (276)
27 3js6_A Uncharacterized PARM pr 99.5 5.3E-15 1.8E-19 154.7 8.8 205 172-415 114-339 (355)
28 1k8k_B ARP2, actin-like protei 99.5 8E-15 2.7E-19 156.2 6.4 214 172-411 105-363 (394)
29 3lof_A Heat shock 70 kDa prote 99.5 1.1E-13 3.8E-18 119.5 11.4 92 564-655 3-113 (113)
30 2d0o_A DIOL dehydratase-reacti 99.5 8.7E-14 3E-18 146.3 10.5 192 184-411 367-603 (610)
31 1nbw_A Glycerol dehydratase re 99.5 9.8E-14 3.3E-18 146.5 10.1 190 186-411 371-605 (607)
32 4apw_A ALP12; actin-like prote 99.4 2.9E-13 9.9E-18 140.3 7.4 205 172-414 106-326 (329)
33 2p32_A Heat shock 70 kDa prote 99.3 4.3E-12 1.5E-16 110.6 6.1 91 565-655 13-120 (120)
34 1ud0_A HSC70, 70 kDa heat-shoc 99.2 2.4E-11 8.2E-16 105.0 6.1 77 568-644 2-80 (113)
35 3dwl_A Actin-related protein 3 99.2 5.5E-11 1.9E-15 127.1 9.3 224 171-411 123-395 (427)
36 3qb0_A Actin-related protein 4 98.9 5.1E-09 1.7E-13 113.1 11.5 93 173-276 116-209 (498)
37 4fo0_A Actin-related protein 8 98.5 5.4E-07 1.8E-11 101.1 13.8 101 165-276 187-293 (593)
38 4b9q_A Chaperone protein DNAK; 98.4 1.7E-07 5.9E-12 104.9 6.4 86 69-159 119-204 (605)
39 1yuw_A Heat shock cognate 71 k 98.4 2E-07 6.7E-12 103.4 6.6 64 96-159 146-209 (554)
40 2kho_A Heat shock protein 70; 98.4 2.2E-07 7.5E-12 104.1 6.1 64 96-160 142-205 (605)
41 3d2f_A Heat shock protein homo 98.4 2.4E-07 8.3E-12 104.6 6.3 64 96-159 145-213 (675)
42 2v7y_A Chaperone protein DNAK; 98.2 8.4E-07 2.9E-11 97.4 6.6 62 96-159 116-177 (509)
43 3i33_A Heat shock-related 70 k 98.2 9.3E-07 3.2E-11 94.2 6.5 64 96-159 165-230 (404)
44 4gni_A Putative heat shock pro 98.2 9.5E-07 3.2E-11 94.3 6.2 88 68-159 133-221 (409)
45 1hux_A Activator of (R)-2-hydr 98.2 1.4E-05 4.7E-10 80.0 14.1 74 336-414 185-258 (270)
46 3qfu_A 78 kDa glucose-regulate 98.1 3.9E-06 1.3E-10 89.0 6.6 85 69-158 137-221 (394)
47 1dkg_D Molecular chaperone DNA 98.0 4.5E-06 1.5E-10 88.2 5.4 63 96-159 142-204 (383)
48 1jce_A ROD shape-determining p 97.9 9.6E-06 3.3E-10 84.3 6.2 89 65-159 75-163 (344)
49 2fsj_A Hypothetical protein TA 97.9 4.8E-06 1.6E-10 86.6 3.4 96 63-160 94-207 (346)
50 3h1q_A Ethanolamine utilizatio 97.8 3E-05 1E-09 77.6 7.9 83 68-157 71-153 (272)
51 4am6_A Actin-like protein ARP8 97.6 7.4E-05 2.5E-09 81.7 8.0 124 172-310 222-346 (655)
52 2ych_A Competence protein PILM 97.5 4.3E-05 1.5E-09 80.4 3.6 136 7-159 52-207 (377)
53 2i7n_A Pantothenate kinase 1; 97.3 0.0032 1.1E-07 64.6 14.7 47 364-410 306-358 (360)
54 2ews_A Pantothenate kinase; PA 97.2 0.0034 1.2E-07 62.6 13.6 76 330-410 207-286 (287)
55 2fxu_A Alpha-actin-1, actin, a 96.8 0.0017 5.7E-08 68.1 7.6 79 69-157 81-162 (375)
56 1k8k_A ARP3, actin-like protei 96.8 0.0027 9.4E-08 67.5 8.7 84 70-157 89-177 (418)
57 3l0q_A Xylulose kinase; xlylul 96.4 0.0065 2.2E-07 67.0 8.6 85 329-415 408-492 (554)
58 4bc3_A Xylulose kinase; transf 96.2 0.0097 3.3E-07 65.4 8.8 78 336-415 407-484 (538)
59 2itm_A Xylulose kinase, xylulo 96.1 0.0076 2.6E-07 65.4 7.4 78 337-415 360-437 (484)
60 3ll3_A Gluconate kinase; xylul 96.0 0.012 4E-07 64.2 8.2 77 337-415 367-443 (504)
61 2zf5_O Glycerol kinase; hypert 96.0 0.013 4.6E-07 63.6 8.6 76 337-415 368-443 (497)
62 3i8b_A Xylulose kinase; strain 96.0 0.0089 3.1E-07 65.2 7.1 77 331-415 395-474 (515)
63 3hz6_A Xylulokinase; xylulose, 95.9 0.014 4.9E-07 63.6 8.4 75 337-415 378-453 (511)
64 3jvp_A Ribulokinase; PSI-II, N 95.6 0.015 5.1E-07 64.4 7.2 80 331-415 410-490 (572)
65 3g25_A Glycerol kinase; IDP007 95.6 0.015 5.2E-07 63.2 7.1 77 337-415 377-454 (501)
66 3ezw_A Glycerol kinase; glycer 95.5 0.014 4.8E-07 63.9 6.4 73 338-415 376-452 (526)
67 4e1j_A Glycerol kinase; struct 95.5 0.013 4.4E-07 64.1 5.8 51 363-415 425-475 (520)
68 2dpn_A Glycerol kinase; thermu 95.4 0.029 9.8E-07 61.0 8.3 77 337-415 371-448 (495)
69 3h3n_X Glycerol kinase; ATP-bi 95.4 0.018 6.2E-07 62.7 6.8 51 363-415 403-453 (506)
70 3ifr_A Carbohydrate kinase, FG 95.4 0.016 5.6E-07 63.1 6.2 77 331-415 371-450 (508)
71 2p3r_A Glycerol kinase; glycer 95.4 0.016 5.6E-07 63.1 6.2 76 338-415 375-451 (510)
72 3mdq_A Exopolyphosphatase; str 95.3 0.9 3.1E-05 45.8 18.6 79 186-270 91-170 (315)
73 2d4w_A Glycerol kinase; alpha 95.2 0.022 7.4E-07 62.1 6.4 51 363-415 403-453 (504)
74 2w40_A Glycerol kinase, putati 94.8 0.035 1.2E-06 60.4 6.8 50 364-415 407-457 (503)
75 1t6c_A Exopolyphosphatase; alp 94.6 0.082 2.8E-06 53.5 8.3 80 185-270 98-177 (315)
76 2uyt_A Rhamnulokinase; rhamnos 94.3 0.05 1.7E-06 58.9 6.6 47 363-412 393-439 (489)
77 3cer_A Possible exopolyphospha 92.7 0.46 1.6E-05 48.5 10.2 80 187-270 105-191 (343)
78 2ivn_A O-sialoglycoprotein end 92.5 2.6 9E-05 42.6 15.5 67 344-415 230-301 (330)
79 1k8k_B ARP2, actin-like protei 91.6 0.033 1.1E-06 58.5 -0.1 61 90-157 105-166 (394)
80 3h6e_A Carbohydrate kinase, FG 91.3 0.15 5.2E-06 54.8 4.9 71 336-412 362-435 (482)
81 3r8e_A Hypothetical sugar kina 90.2 16 0.00055 36.4 18.7 47 364-410 261-317 (321)
82 2zgy_A Plasmid segregation pro 90.1 0.12 4.1E-06 52.5 2.5 92 62-159 72-180 (320)
83 1u6z_A Exopolyphosphatase; alp 88.6 0.63 2.1E-05 50.4 6.9 80 185-270 97-176 (513)
84 3ven_A O-carbamoyltransferase 87.8 10 0.00035 41.1 15.6 79 332-415 280-360 (576)
85 3js6_A Uncharacterized PARM pr 87.6 0.33 1.1E-05 50.0 3.7 68 91-158 115-199 (355)
86 3hi0_A Putative exopolyphospha 86.4 1.8 6.3E-05 46.7 8.9 77 186-269 102-178 (508)
87 4a2a_A Cell division protein F 86.0 0.27 9.4E-06 51.8 2.2 91 66-159 103-222 (419)
88 3en9_A Glycoprotease, O-sialog 83.0 26 0.00088 37.9 16.4 203 170-407 72-297 (540)
89 3qbx_A Anhydro-N-acetylmuramic 82.7 3.9 0.00013 41.7 8.8 73 338-413 261-337 (371)
90 3dwl_A Actin-related protein 3 82.2 2.4 8.1E-05 44.7 7.4 87 68-157 103-193 (427)
91 3vov_A Glucokinase, hexokinase 81.6 21 0.00073 35.2 14.0 44 197-242 98-141 (302)
92 3qb0_A Actin-related protein 4 77.9 3.1 0.0001 44.6 6.5 83 65-157 90-176 (498)
93 3cqy_A Anhydro-N-acetylmuramic 77.9 5.6 0.00019 40.6 8.1 72 337-412 267-342 (370)
94 3vth_A Hydrogenase maturation 77.2 3.6 0.00012 46.4 7.1 65 346-415 681-750 (761)
95 4g9i_A Hydrogenase maturation 77.2 5.7 0.0002 45.0 8.7 62 346-412 693-759 (772)
96 3ttc_A HYPF, transcriptional r 77.1 7.1 0.00024 43.2 9.2 64 344-412 585-651 (657)
97 3vgl_A Glucokinase; ROK family 76.3 63 0.0022 32.0 18.5 44 197-242 96-139 (321)
98 3eno_A Putative O-sialoglycopr 76.3 5.4 0.00018 40.4 7.6 69 342-415 233-306 (334)
99 4am6_A Actin-like protein ARP8 75.6 5.4 0.00018 43.8 7.6 62 90-157 222-284 (655)
100 2e1z_A Propionate kinase; TDCD 75.1 70 0.0024 33.0 15.4 26 362-387 329-355 (415)
101 1g99_A Acetate kinase; alpha/b 74.9 25 0.00086 36.2 12.1 43 341-387 304-347 (408)
102 2ap1_A Putative regulator prot 73.8 51 0.0018 32.6 14.3 44 197-242 120-163 (327)
103 1z6r_A MLC protein; transcript 73.7 84 0.0029 32.2 16.4 44 197-242 186-229 (406)
104 2e2o_A Hexokinase; acetate and 67.7 6.4 0.00022 38.9 5.8 49 363-412 239-287 (299)
105 4ijn_A Acetate kinase, acetoki 65.0 39 0.0013 34.6 10.8 43 341-387 305-348 (398)
106 2iir_A Acetate kinase; transfe 64.1 54 0.0019 33.7 11.7 43 342-388 305-348 (403)
107 3aap_A Ectonucleoside triphosp 62.6 6.9 0.00024 39.9 4.8 45 198-243 108-158 (353)
108 4fo0_A Actin-related protein 8 60.8 25 0.00087 38.4 9.5 76 75-157 178-260 (593)
109 3r9p_A ACKA; ssgcid, seattle s 60.7 57 0.002 33.3 11.1 44 340-387 295-339 (391)
110 2gup_A ROK family protein; sug 59.2 28 0.00094 34.0 8.6 49 364-412 228-287 (292)
111 3khy_A Propionate kinase; csgi 57.3 1E+02 0.0034 31.4 12.1 25 363-387 313-338 (384)
112 3cet_A Conserved archaeal prot 56.8 7.5 0.00026 39.0 3.7 37 203-243 109-145 (334)
113 3cj1_A Ectonucleoside triphosp 53.1 16 0.00055 38.5 5.8 44 200-243 150-208 (456)
114 4htl_A Beta-glucoside kinase; 51.0 33 0.0011 33.7 7.5 50 364-413 238-292 (297)
115 3sk3_A Acetate kinase, acetoki 49.5 79 0.0027 32.6 10.1 25 363-387 339-364 (415)
116 2qm1_A Glucokinase; alpha-beta 49.1 38 0.0013 33.5 7.8 48 364-411 263-320 (326)
117 4db3_A Glcnac kinase, N-acetyl 48.0 31 0.001 34.5 6.8 47 364-410 270-324 (327)
118 2aa4_A Mannac kinase, putative 47.1 23 0.00077 34.6 5.6 47 364-410 234-286 (289)
119 1saz_A Probable butyrate kinas 43.8 24 0.0008 36.3 5.3 48 363-410 295-346 (381)
120 1zc6_A Probable N-acetylglucos 43.2 15 0.00051 36.4 3.5 63 339-411 228-292 (305)
121 1msz_A DNA-binding protein smu 40.8 22 0.00076 27.8 3.3 30 91-120 33-62 (86)
122 4fla_A Regulation of nuclear P 39.6 1.9E+02 0.0065 25.2 10.6 64 570-642 79-145 (152)
123 3htv_A D-allose kinase, alloki 37.9 76 0.0026 31.2 7.8 49 363-411 239-298 (310)
124 1zbs_A Hypothetical protein PG 37.7 13 0.00046 36.4 2.2 68 338-412 211-280 (291)
125 3zx3_A Ectonucleoside triphosp 36.3 40 0.0014 35.4 5.6 44 200-243 150-199 (452)
126 2hoe_A N-acetylglucosamine kin 34.8 81 0.0028 32.0 7.7 48 364-411 315-370 (380)
127 3o8m_A Hexokinase; rnaseh-like 34.6 82 0.0028 33.3 7.7 30 224-253 79-108 (485)
128 3lay_A Zinc resistance-associa 33.8 2.6E+02 0.0088 25.0 9.8 66 541-614 66-131 (175)
129 1hnj_A Beta-ketoacyl-acyl carr 29.5 58 0.002 32.1 5.3 47 339-388 213-259 (317)
130 1zxo_A Conserved hypothetical 29.4 9.6 0.00033 37.5 -0.5 67 339-410 210-276 (291)
131 2q2r_A Glucokinase 1, putative 29.2 79 0.0027 32.0 6.4 17 198-214 128-144 (373)
132 3f9m_A Glucokinase; hexokinase 29.1 1.5E+02 0.005 31.3 8.4 54 223-279 75-136 (470)
133 1xrs_B D-lysine 5,6-aminomutas 28.8 68 0.0023 30.9 5.4 100 89-191 33-141 (262)
134 4i95_A Putative uncharacterize 28.4 1.3E+02 0.0043 25.6 6.1 71 460-531 37-118 (142)
135 4gic_A HDH, histidinol dehydro 27.6 1.9E+02 0.0065 29.7 8.6 48 171-219 160-208 (423)
136 3zyy_X Iron-sulfur cluster bin 27.4 94 0.0032 34.0 6.8 82 327-409 499-581 (631)
137 1kae_A HDH, histidinol dehydro 27.4 1.4E+02 0.0047 30.9 7.5 45 170-218 153-198 (434)
138 3mtq_A Putative phosphoenolpyr 27.3 2.1E+02 0.0073 25.0 8.0 45 149-193 26-70 (159)
139 3epq_A Putative fructokinase; 26.7 1E+02 0.0036 30.1 6.6 43 198-242 98-140 (302)
140 3fcg_A F1 capsule-anchoring pr 25.9 2E+02 0.0069 22.6 6.7 56 470-539 26-81 (90)
141 2yhx_A Hexokinase B; transfera 25.7 2.4E+02 0.0084 29.4 9.5 25 223-247 59-83 (457)
142 2yhw_A Bifunctional UDP-N-acet 25.1 1.8E+02 0.0061 28.8 8.2 44 197-242 131-174 (343)
143 1h7c_A Tubulin-specific chaper 24.8 1.7E+02 0.0057 23.9 6.3 41 592-632 62-103 (108)
144 3zyy_X Iron-sulfur cluster bin 24.1 2.8E+02 0.0096 30.3 9.8 98 226-379 207-305 (631)
145 2hc5_A ORF 99, hypothetical pr 23.9 89 0.003 26.0 4.5 43 508-558 57-100 (117)
146 2a01_A Apolipoprotein A-I; fou 23.7 27 0.00092 33.4 1.5 21 595-615 168-188 (243)
147 1ub7_A 3-oxoacyl-[acyl-carrier 23.4 76 0.0026 31.2 4.9 45 341-388 217-261 (322)
148 2ebd_A 3-oxoacyl-[acyl-carrier 23.3 81 0.0028 30.8 5.1 44 342-388 208-251 (309)
149 2ch5_A NAGK protein; transfera 23.1 47 0.0016 33.2 3.3 48 366-414 268-326 (347)
150 3s84_A Apolipoprotein A-IV; fo 22.8 4.8E+02 0.017 25.0 10.3 19 569-587 69-87 (273)
151 3mxz_A Tubulin-specific chaper 22.4 3.3E+02 0.011 22.4 9.9 38 595-632 66-106 (116)
152 3bex_A Type III pantothenate k 21.4 1.3E+02 0.0046 28.5 6.0 72 170-263 56-146 (249)
153 1t6c_A Exopolyphosphatase; alp 21.2 1.2E+02 0.004 30.0 5.7 55 103-157 98-152 (315)
154 4htl_A Beta-glucoside kinase; 21.2 4.2E+02 0.014 25.4 9.8 44 197-242 97-140 (297)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.4e-94 Score=812.02 Aligned_cols=547 Identities=49% Similarity=0.800 Sum_probs=508.1
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEee-cCCcceEEEEEcCceeEeChhhhHHHHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEISSMVLTKMRE 79 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~ 79 (655)
+|..|++++.+||.||++++|||||++|+||.++...++|||+++. .+|.+.+.+ ++ ..++|+++++++|+++++
T Consensus 50 vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~--~~--~~~~p~ei~a~iL~~lk~ 125 (605)
T 4b9q_A 50 VGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKK 125 (605)
T ss_dssp ESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHHHHHHTTCSSEEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHHHHHhhcCCeEEEEcCCCceEEEE--CC--EEECHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999984 566666654 45 689999999999999999
Q ss_pred HHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 80 IAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 80 ~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
.|+.++|.++.++
T Consensus 126 ~ae~~lg~~v~~~------------------------------------------------------------------- 138 (605)
T 4b9q_A 126 TAEDYLGEPVTEA------------------------------------------------------------------- 138 (605)
T ss_dssp HHHHHHTSCCCEE-------------------------------------------------------------------
T ss_pred HHHHHhCCCCCeE-------------------------------------------------------------------
Confidence 9999988777666
Q ss_pred HHHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEE
Q psy3270 160 REIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDV 239 (655)
Q Consensus 160 ~~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dv 239 (655)
|||||++|++.||+++++|++.|||+++++++||+|||++|+.... ..+.+++|||+||||||+
T Consensus 139 ---------------VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~-~~~~~vlV~DlGGGT~Dv 202 (605)
T 4b9q_A 139 ---------------VITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGAFDI 202 (605)
T ss_dssp ---------------EEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSC-CSSEEEEEEEECSSCEEE
T ss_pred ---------------EEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhcc-CCCCEEEEEECCCCeEEE
Confidence 5566666778888888999999999999999999999999988754 256899999999999999
Q ss_pred EEEEEeC----CceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3270 240 SVLAIDE----GSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASL 315 (655)
Q Consensus 240 sv~~~~~----~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i 315 (655)
|++++.. + .++++++.|+.++||.+||++|++|+.++|..+++.++..+++.+.+|+.+||++|+.||......+
T Consensus 203 si~~~~~~~~~~-~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i 281 (605)
T 4b9q_A 203 SIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDV 281 (605)
T ss_dssp EEEEEEESSSCE-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEE
T ss_pred EEEEEecCCCCc-eEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEE
Confidence 9999987 6 9999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred EEccccCC----cceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCc
Q psy3270 316 EIDALHEG----IDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKS 391 (655)
Q Consensus 316 ~i~~~~~~----~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~ 391 (655)
.++.+..+ .++..+|||++|+++++|+++++..+++++|+.+++...+|+.|+||||+||+|+|+++|++.| +.+
T Consensus 282 ~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~ 360 (605)
T 4b9q_A 282 NLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKE 360 (605)
T ss_dssp EEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSC
T ss_pred EEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccC
Confidence 88765432 5788999999999999999999999999999999999999999999999999999999999999 678
Q ss_pred ccCCCCchhHHHhHHHHHHHHHcCCCCccccCeEeeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCcee
Q psy3270 392 LNLSINPDEAVAYGAAVQAAILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAV 471 (655)
Q Consensus 392 v~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~ 471 (655)
+..+.||++|||+|||++|+.+++. .+++.+.|++|+|||+++.+|.|.++||||++||++++.+|++..|+|+.+
T Consensus 361 ~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v 436 (605)
T 4b9q_A 361 PRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAV 436 (605)
T ss_dssp CCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEE
T ss_pred cCCCcChhHHHHHhHHHHHHHhcCC----CCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceE
Confidence 8899999999999999999999983 578999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCcccccCCcceeeEEecCCCCCCCCCCeEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHH
Q psy3270 472 TIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRM 551 (655)
Q Consensus 472 ~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~ 551 (655)
.|.+|||++..+.+|..||+|.|.++||.|.|.++|+|+|++|.||+|+|++.++.||++.+++|.+. .+||++|++++
T Consensus 437 ~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~ 515 (605)
T 4b9q_A 437 TIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKM 515 (605)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHH
T ss_pred EEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887 47999999999
Q ss_pred HHHHHHhhhhcHHHHHHHHHHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhccCCccCHHHHHHHHHHHH
Q psy3270 552 LAEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTLQ 631 (655)
Q Consensus 552 ~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~kl~~L~ 631 (655)
+++++++.++|+..+++.++||+||+|+|++++.|++...++++++++++.+.++++++||+.+ +.++|++++++|+
T Consensus 516 ~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~ 592 (605)
T 4b9q_A 516 VRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELA 592 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHH
T ss_pred HHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986557899999999999999999999986 5889999999999
Q ss_pred HHHHHHHHHHHhc
Q psy3270 632 QTCTPIMTKLHQA 644 (655)
Q Consensus 632 ~~~~~i~~r~~e~ 644 (655)
+.+.|+..+++++
T Consensus 593 ~~~~~~~~~~~~~ 605 (605)
T 4b9q_A 593 QVSQKLMEIAQQQ 605 (605)
T ss_dssp HHTHHHHHHC---
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998763
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.6e-94 Score=815.09 Aligned_cols=556 Identities=27% Similarity=0.441 Sum_probs=510.4
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEee-cCCcceEEEEEcCceeEeChhhhHHHHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEISSMVLTKMRE 79 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~ 79 (655)
+|.+|++++.+||+||++++|||||++++|+.++..+++|||.++. .+|.+.+.+.+.|+.+.|+|++|++++|+++++
T Consensus 49 vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~ 128 (675)
T 3d2f_A 49 LGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKD 128 (675)
T ss_dssp ETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTHHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHH
T ss_pred ecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999985 578888888888877899999999999999999
Q ss_pred HHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 80 IAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 80 ~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
.|+.++|.++.++
T Consensus 129 ~ae~~lg~~v~~~------------------------------------------------------------------- 141 (675)
T 3d2f_A 129 TVKQDTKANITDV------------------------------------------------------------------- 141 (675)
T ss_dssp HHHHHHCSCCCEE-------------------------------------------------------------------
T ss_pred HHHHHhCCCcceE-------------------------------------------------------------------
Confidence 9999988777666
Q ss_pred HHHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccc-c----CCCceEEEEEeCC
Q psy3270 160 REIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKN-L----KGEKNVLIFDLGG 234 (655)
Q Consensus 160 ~~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~-~----~~~~~vlV~D~Gg 234 (655)
|||||++|++.||+++++|++.||++++++++||+|||++|+.... . ..+.+++|||+||
T Consensus 142 ---------------VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGG 206 (675)
T 3d2f_A 142 ---------------CIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGH 206 (675)
T ss_dssp ---------------EEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECS
T ss_pred ---------------EEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCC
Confidence 5555666677788888888899999999999999999999987542 1 3567899999999
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceE
Q psy3270 235 GTFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEAS 314 (655)
Q Consensus 235 gT~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~ 314 (655)
||||+|++++.+| .++++++.|+.++||++||+.|++|+.++|..+++.++..+++.+.+|+.+||++|+.||.+....
T Consensus 207 GT~Dvsv~~~~~g-~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~ 285 (675)
T 3d2f_A 207 SSYTCSIMAFKKG-QLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAP 285 (675)
T ss_dssp SCEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEE
T ss_pred CcEEEEEEEecCC-eEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceE
Confidence 9999999999988 899999999999999999999999999999999999998999999999999999999999988888
Q ss_pred EEEccccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccC
Q psy3270 315 LEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNL 394 (655)
Q Consensus 315 i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~ 394 (655)
+.++++.++.++...|||++|+++|+|+++++..+|+++|+.+++++.+|+.|+||||+||+|+|+++|++.| +.++..
T Consensus 286 i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~ 364 (675)
T 3d2f_A 286 FSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLST 364 (675)
T ss_dssp EEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEEC
T ss_pred EEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccc
Confidence 9999888888999999999999999999999999999999999999999999999999999999999999999 677888
Q ss_pred CCCchhHHHhHHHHHHHHHcCCCCccccCeEeeecccCCCCccccCc----EEEEEEecCCccCcceeEEEEeecCCCce
Q psy3270 395 SINPDEAVAYGAAVQAAILSGDTSSAIQDVLLVDVAPLSLGIETAGG----VMTKIVERNSRIPCKQQQTFTTYSDNQNA 470 (655)
Q Consensus 395 ~~~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~d~~~~s~gi~~~~~----~~~~ii~~~~~iP~~~~~~~~~~~d~q~~ 470 (655)
+.||++|||+|||++|+.+++ .++++++.+.|++|+|||+++.++ .+.+|||+|++||++++.+|++..++
T Consensus 365 ~~nPdeaVA~GAa~~a~~ls~--~~~v~~~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~--- 439 (675)
T 3d2f_A 365 TLNQDEAIAKGAAFICAIHSP--TLRVRPFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF--- 439 (675)
T ss_dssp CSCTTTHHHHHHHHHHHHTCS--SCCCCCCEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE---
T ss_pred cCCcchHHHHHHHHHHHHhCC--CCcccceEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCc---
Confidence 999999999999999999998 456788999999999999999876 49999999999999999999886553
Q ss_pred eEEEE-EecCccccc-CCcceeeEEecCCCCCCCCCC-eEEEEEEeCCCeeEEEEEE----------eccCCCceeeeee
Q psy3270 471 VTIQV-FEGERAMTK-DNNLLGTFNLTGIPPAPRGVP-KIEVTFDLDANGILNVSAK----------DSSTGKAERITIQ 537 (655)
Q Consensus 471 ~~i~i-~~g~~~~~~-~~~~lg~~~i~~~~~~~~g~~-~i~v~~~~d~~g~l~v~~~----------~~~~~~~~~~~i~ 537 (655)
.+.+ |+|++.++. +|..||+|.|.|+||.|.|.+ +|+|+|++|.||+|+|++. ++.||+..+++|+
T Consensus 440 -~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~ 518 (675)
T 3d2f_A 440 -SMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIV 518 (675)
T ss_dssp -EEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEE
T ss_pred -eEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEe
Confidence 3444 779998887 999999999999999999985 9999999999999999995 7889999999999
Q ss_pred cCCCCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHHHHHHHHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhccC-
Q psy3270 538 NDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSG-SKLSDADKTSVSQACSATLTWLEGN- 615 (655)
Q Consensus 538 ~~~~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~-~~~~~~e~~~l~~~l~e~~~WL~~~- 615 (655)
+...+||++|++++++++.+|..+|+.++++.++||+||+|+|++|+.|.+.. .++++++++++.+.++++++|||++
T Consensus 519 ~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~ 598 (675)
T 3d2f_A 519 AHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEG 598 (675)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGG
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 87668999999999999999999999999999999999999999999997644 7899999999999999999999976
Q ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy3270 616 SLAEKEEFEDRLKTLQQTCTPIMTKLHQAGG 646 (655)
Q Consensus 616 ~~a~~~~~~~kl~~L~~~~~~i~~r~~e~~~ 646 (655)
.++++++|++|+++|+++++||..|++++..
T Consensus 599 ~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~ 629 (675)
T 3d2f_A 599 FDSIKAKYIAKYEELASLGNIIRGRYLAKEE 629 (675)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4789999999999999999999999998743
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=3.4e-93 Score=800.84 Aligned_cols=546 Identities=49% Similarity=0.807 Sum_probs=506.2
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEe-ecCCcceEEEEEcCceeEeChhhhHHHHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVV-SDGGKPKIQVEYKGEIKKFAPEEISSMVLTKMRE 79 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~ 79 (655)
+|..|++++.+||++|++++|||||++|+|+.++..++.|||.++ ..+|.+.+.+ +| +.|+|++|++++|+++++
T Consensus 50 vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~ 125 (605)
T 2kho_A 50 VGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKK 125 (605)
T ss_dssp ESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTHHHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHH
T ss_pred ECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHHHHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999997 5577776666 55 689999999999999999
Q ss_pred HHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 80 IAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 80 ~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
.|+.++|.++.++
T Consensus 126 ~ae~~l~~~v~~~------------------------------------------------------------------- 138 (605)
T 2kho_A 126 TAEDYLGEPVTEA------------------------------------------------------------------- 138 (605)
T ss_dssp HHHHHHCSCCCEE-------------------------------------------------------------------
T ss_pred HHHHHhCCCCcEE-------------------------------------------------------------------
Confidence 9999888766666
Q ss_pred HHHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEE
Q psy3270 160 REIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDV 239 (655)
Q Consensus 160 ~~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dv 239 (655)
|||||++|++.||+++++|++.||++++++++||+|||++|+.... ..+.++||||+||||||+
T Consensus 139 ---------------VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~-~~~~~vlV~DlGGGT~Dv 202 (605)
T 2kho_A 139 ---------------VITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDI 202 (605)
T ss_dssp ---------------EEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSS-SSEEEEEEEEECSSCEEE
T ss_pred ---------------EEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhccc-CCCCEEEEEECCCCeEEE
Confidence 5556666777888888888999999999999999999999998653 246789999999999999
Q ss_pred EEEEEe----CCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3270 240 SVLAID----EGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASL 315 (655)
Q Consensus 240 sv~~~~----~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i 315 (655)
|++++. ++ .++++++.|+.++||++||+.|++|+.++|.++++.++..+++.+.+|+.+||++|+.||......+
T Consensus 203 si~~~~~~~~~g-~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i 281 (605)
T 2kho_A 203 SIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDV 281 (605)
T ss_dssp EEEEEECTTTSC-EEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred EEEEEEecCCCC-eEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEE
Confidence 999998 56 8999999999999999999999999999999999988888899999999999999999999988888
Q ss_pred EEccccC---C-cceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCc
Q psy3270 316 EIDALHE---G-IDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKS 391 (655)
Q Consensus 316 ~i~~~~~---~-~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~ 391 (655)
.++.+.+ | .++..+|||++|+++++|+++++..+|+++|+.+++.+.+|+.|+||||+|++|+|+++|++.| +.+
T Consensus 282 ~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~ 360 (605)
T 2kho_A 282 NLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKE 360 (605)
T ss_dssp EEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSC
T ss_pred EecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCC
Confidence 8876554 2 4677899999999999999999999999999999999999999999999999999999999999 677
Q ss_pred ccCCCCchhHHHhHHHHHHHHHcCCCCccccCeEeeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCcee
Q psy3270 392 LNLSINPDEAVAYGAAVQAAILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAV 471 (655)
Q Consensus 392 v~~~~~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~ 471 (655)
+..+.||++|||+|||++|+.+++. ++++.+.|++|+|||+++.+|.|.++||+|+++|++++..|++..|+|+.+
T Consensus 361 ~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v 436 (605)
T 2kho_A 361 PRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAV 436 (605)
T ss_dssp CBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCCSBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEE
T ss_pred cCcCCCcchHHHHHHHHHHHHhcCC----ccCceEEeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEE
Confidence 8889999999999999999999873 578899999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCcccccCCcceeeEEecCCCCCCCCCCeEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHH
Q psy3270 472 TIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRM 551 (655)
Q Consensus 472 ~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~ 551 (655)
.|.+|||++..+.+|..||+|.|.++||.|.|.++|+|+|++|.||+|+|++.+..||+..+++|++. .+||++|++++
T Consensus 437 ~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~ 515 (605)
T 2kho_A 437 TIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKM 515 (605)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHH
T ss_pred EEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 78999999999
Q ss_pred HHHHHHhhhhcHHHHHHHHHHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhccCCccCHHHHHHHHHHHH
Q psy3270 552 LAEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTLQ 631 (655)
Q Consensus 552 ~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~kl~~L~ 631 (655)
++++.++..+|+..+++.++||+||+|+|++|+.|.+...++++++++++.+.++++++||+++ +.++|++++++|+
T Consensus 516 ~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~ 592 (605)
T 2kho_A 516 VRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELA 592 (605)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987557899999999999999999999964 8899999999999
Q ss_pred HHHHHHHHHHHh
Q psy3270 632 QTCTPIMTKLHQ 643 (655)
Q Consensus 632 ~~~~~i~~r~~e 643 (655)
+.++|+..|+++
T Consensus 593 ~~~~~~~~~~~~ 604 (605)
T 2kho_A 593 QVSQKLMEIAQQ 604 (605)
T ss_dssp TTCHHHHHHHC-
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=2.4e-88 Score=754.55 Aligned_cols=503 Identities=77% Similarity=1.147 Sum_probs=472.9
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEeecCCcceEEEEEcCceeEeChhhhHHHHHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISSMVLTKMREI 80 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~~ 80 (655)
+|.+|++++.++|+||++++|||||++|+|+.++..++.|||.++..+|.+.+.+.+.++.+.|+|+++++++|+++++.
T Consensus 51 vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ 130 (554)
T 1yuw_A 51 IGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEI 130 (554)
T ss_dssp ETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHH
T ss_pred EcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999977899999999998888999999999999999999
Q ss_pred HHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHHH
Q psy3270 81 AEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSMR 160 (655)
Q Consensus 81 ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l~ 160 (655)
|+.++|.++.++
T Consensus 131 ae~~lg~~v~~~-------------------------------------------------------------------- 142 (554)
T 1yuw_A 131 AEAYLGKTVTNA-------------------------------------------------------------------- 142 (554)
T ss_dssp HHHHHSSCCCEE--------------------------------------------------------------------
T ss_pred HHHHhCCCCCeE--------------------------------------------------------------------
Confidence 999988766666
Q ss_pred HHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEE
Q psy3270 161 EIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVS 240 (655)
Q Consensus 161 ~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvs 240 (655)
|||||++|++.||+++++|++.||++++++++||+|||++|+.......+..++|||+||||||+|
T Consensus 143 --------------VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvs 208 (554)
T 1yuw_A 143 --------------VVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVS 208 (554)
T ss_dssp --------------EEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEE
T ss_pred --------------EEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEE
Confidence 555666677788888888899999999999999999999999876433578899999999999999
Q ss_pred EEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEEEEccc
Q psy3270 241 VLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASLEIDAL 320 (655)
Q Consensus 241 v~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~~~ 320 (655)
++++.++ .++++++.|+.++||++||+.|++|+.++|..+++.++..+++.+.+|+.+||++|+.||......+.++++
T Consensus 209 v~~~~~g-~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~ 287 (554)
T 1yuw_A 209 ILTIAAG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSL 287 (554)
T ss_dssp EEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTC
T ss_pred EEEEcCC-cEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeec
Confidence 9999888 899999999999999999999999999999999998888899999999999999999999999999999988
Q ss_pred cCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchh
Q psy3270 321 HEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDE 400 (655)
Q Consensus 321 ~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ 400 (655)
.++.++...++|++|+++++|+++++..+|+++|+.+++.+.+|+.|+||||+|++|+|++.|++.|++.++..+.||++
T Consensus 288 ~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~ 367 (554)
T 1yuw_A 288 YEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE 367 (554)
T ss_dssp SSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTT
T ss_pred cCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchh
Confidence 88889999999999999999999999999999999999999999999999999999999999999997788888999999
Q ss_pred HHHhHHHHHHHHHcCCCCccccCeEeeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCc
Q psy3270 401 AVAYGAAVQAAILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGER 480 (655)
Q Consensus 401 ava~GAa~~a~~l~~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~ 480 (655)
|||+|||++|+.+++...+.++++.+.|++|+|||+++.+|.+.++|++|+++|++++..|++..|+|+.+.|.+|||++
T Consensus 368 aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~ 447 (554)
T 1yuw_A 368 AVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGER 447 (554)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSS
T ss_pred HHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCc
Confidence 99999999999999854456788999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcceeeEEecCCCCCCCCCCeEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHhhh
Q psy3270 481 AMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKA 560 (655)
Q Consensus 481 ~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~~~ 560 (655)
..+.+|..||+|.|.++||.|.|.++|+|+|++|.||+|+|++.++.||+..+++|+++.++||++|++++++++.+++.
T Consensus 448 ~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~ 527 (554)
T 1yuw_A 448 AMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKA 527 (554)
T ss_dssp SBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTT
T ss_pred cccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999988778999999999999999999
Q ss_pred hcHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3270 561 EDDKQRERVAAKNKLESYAFAVKQAA 586 (655)
Q Consensus 561 ~D~~~~~~~~akN~LEs~iy~~r~~l 586 (655)
+|+..+++.++||+||+|+|.+|+.|
T Consensus 528 ~d~~~~~~~~~~n~~e~~~~~~~~~l 553 (554)
T 1yuw_A 528 EDEKQRDKVSSKNSLESYAFNMKATV 553 (554)
T ss_dssp HHHHHTTSSCSCEECSSCCSCSCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999988765
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=9.4e-77 Score=656.36 Aligned_cols=457 Identities=51% Similarity=0.852 Sum_probs=417.1
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEeecCCcceEEEEEcCceeEeChhhhHHHHHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISSMVLTKMREI 80 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~~ 80 (655)
+|.+|++++..+| ++++.+||+||++|. +..+| ..|+|+++++++|+++++.
T Consensus 49 vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~-------------------------~~~~g--~~~~~~ei~a~~L~~l~~~ 100 (509)
T 2v7y_A 49 VGEVAKRQAITNP-NTIISIKRHMGTDYK-------------------------VEIEG--KQYTPQEISAIILQYLKSY 100 (509)
T ss_dssp ESHHHHTTTTTCS-SEEECGGGTTTSCCC-------------------------EEETT--EEECHHHHHHHHHHHHHHH
T ss_pred ECHHHHHhHHhCC-CcHHHHHHhcCCCcE-------------------------EEECC--EEEcHHHHHHHHHHHHHHH
Confidence 5899999999999 999999999999542 12244 4789999999999999999
Q ss_pred HHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHHH
Q psy3270 81 AEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSMR 160 (655)
Q Consensus 81 ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l~ 160 (655)
|+.+++.++..+
T Consensus 101 ae~~l~~~~~~~-------------------------------------------------------------------- 112 (509)
T 2v7y_A 101 AEDYLGEPVTRA-------------------------------------------------------------------- 112 (509)
T ss_dssp HHHHHTSCCCEE--------------------------------------------------------------------
T ss_pred HHHHhCCCCCeE--------------------------------------------------------------------
Confidence 999887666655
Q ss_pred HHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEE
Q psy3270 161 EIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVS 240 (655)
Q Consensus 161 ~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvs 240 (655)
|||||++|++.||+++++|++.||++++++++||+|||++|+.... .+.+++|||+||||||++
T Consensus 113 --------------VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~--~~~~vlV~D~GgGT~Dvs 176 (509)
T 2v7y_A 113 --------------VITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE--EDQTILVYDLGGGTFDVS 176 (509)
T ss_dssp --------------EEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS--CSEEEEEEEECSSCEEEE
T ss_pred --------------EEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC--CCCEEEEEECCCCeEEEE
Confidence 5566666778888888999999999999999999999999998764 678999999999999999
Q ss_pred EEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEEEEccc
Q psy3270 241 VLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASLEIDAL 320 (655)
Q Consensus 241 v~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~~~ 320 (655)
++++.++ .++++++.|+.++||.+||+.|.+|+.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.+
T Consensus 177 v~~~~~g-~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~ 255 (509)
T 2v7y_A 177 ILELGDG-VFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFI 255 (509)
T ss_dssp EEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEE
T ss_pred EEEEcCC-eEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEecc
Confidence 9999887 899999999999999999999999999999999998888889999999999999999999998888888765
Q ss_pred cC---C-cceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCC
Q psy3270 321 HE---G-IDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSI 396 (655)
Q Consensus 321 ~~---~-~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~ 396 (655)
.+ | .++..+|||++|+++++|+++++..+|+++|+.+++...+++.|+||||+|++|+|+++|++.| +.++..+.
T Consensus 256 ~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~ 334 (509)
T 2v7y_A 256 SANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGV 334 (509)
T ss_dssp EEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCS
T ss_pred ccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCC
Confidence 43 2 4577899999999999999999999999999999998889999999999999999999999999 67788899
Q ss_pred CchhHHHhHHHHHHHHHcCCCCccccCeEeeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEE
Q psy3270 397 NPDEAVAYGAAVQAAILSGDTSSAIQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVF 476 (655)
Q Consensus 397 ~p~~ava~GAa~~a~~l~~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~ 476 (655)
||++|||+|||++|+.+++. .+++.+.|++|++||+++.++.+.++|+||+++|++++..|++..|+|+.+.|.+|
T Consensus 335 ~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~ 410 (509)
T 2v7y_A 335 NPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVL 410 (509)
T ss_dssp CTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEE
T ss_pred CchhhhHhhHHHHHHHhcCC----ccCceEEEeeccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEE
Confidence 99999999999999999873 46788999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccccCCcceeeEEecCCCCCCCCCCeEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHH
Q psy3270 477 EGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAE 556 (655)
Q Consensus 477 ~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~ 556 (655)
||++..+.+|..||+|.|.++||.|+|.++|+++|++|.||+|+|++.+..||+..+++|++. .+||++|++++++++.
T Consensus 411 ~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~ 489 (509)
T 2v7y_A 411 QGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAE 489 (509)
T ss_dssp EESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHH
T ss_pred ecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988 6799999999999999
Q ss_pred HhhhhcHHHHHHHHHHhhHH
Q psy3270 557 KYKAEDDKQRERVAAKNKLE 576 (655)
Q Consensus 557 ~~~~~D~~~~~~~~akN~LE 576 (655)
+|+.+|+..+++.++||+||
T Consensus 490 ~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 490 ENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp HSCGGGGGGGGCCCC-----
T ss_pred HhhhccHHHHHHHHHHhhcC
Confidence 99999999999999999987
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.6e-55 Score=475.14 Aligned_cols=332 Identities=80% Similarity=1.183 Sum_probs=310.0
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEeecCCcceEEEEEcCceeEeChhhhHHHHHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISSMVLTKMREI 80 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~~ 80 (655)
+|..|+.++.++|.++++++||+||++++|+.++...+.|||.++..+|++.+.+.+.++...++|+++++++|+++++.
T Consensus 70 vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~ 149 (404)
T 3i33_A 70 IGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEI 149 (404)
T ss_dssp ETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHH
T ss_pred ecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999998999999999999888999999999999999999
Q ss_pred HHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHHH
Q psy3270 81 AEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSMR 160 (655)
Q Consensus 81 ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l~ 160 (655)
|+.+++.++.++
T Consensus 150 a~~~~~~~~~~~-------------------------------------------------------------------- 161 (404)
T 3i33_A 150 AEAYLGGKVHSA-------------------------------------------------------------------- 161 (404)
T ss_dssp HHHHHSSCCCEE--------------------------------------------------------------------
T ss_pred HHHHhccCCCcE--------------------------------------------------------------------
Confidence 999888766655
Q ss_pred HHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccC--CCceEEEEEeCCceeE
Q psy3270 161 EIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLK--GEKNVLIFDLGGGTFD 238 (655)
Q Consensus 161 ~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~--~~~~vlV~D~GggT~d 238 (655)
|||||++|++.||+++++|++.||++++.+++||+|||++|+...... .+..++|||+||||||
T Consensus 162 --------------vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~d 227 (404)
T 3i33_A 162 --------------VITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFD 227 (404)
T ss_dssp --------------EEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEE
T ss_pred --------------EEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEE
Confidence 666666778888888999999999999999999999999998875533 5788999999999999
Q ss_pred EEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEEEEc
Q psy3270 239 VSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASLEID 318 (655)
Q Consensus 239 vsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~ 318 (655)
++++++.++ .++++++.++..+||.+||+.|.+++.++|..+++.++..+++.+.+|+..||++|+.||......+.++
T Consensus 228 vsv~~~~~~-~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~ 306 (404)
T 3i33_A 228 VSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEID 306 (404)
T ss_dssp EEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEE
T ss_pred EEEEEEeCC-eEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEe
Confidence 999999888 9999999999999999999999999999999999999888999999999999999999999999999998
Q ss_pred cccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCc
Q psy3270 319 ALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINP 398 (655)
Q Consensus 319 ~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p 398 (655)
.+.++.++...++|++|+++++|+++++..+|.++|+.+++...+++.|+|+||+|++|+|++.|++.|++.++..+.||
T Consensus 307 ~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p 386 (404)
T 3i33_A 307 SLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINP 386 (404)
T ss_dssp EEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCT
T ss_pred eccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCH
Confidence 88888999999999999999999999999999999999999989999999999999999999999999987888899999
Q ss_pred hhHHHhHHHHHHHHHcC
Q psy3270 399 DEAVAYGAAVQAAILSG 415 (655)
Q Consensus 399 ~~ava~GAa~~a~~l~~ 415 (655)
++|||+|||++|+.+++
T Consensus 387 ~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 387 DEAVAYGAAVQAAILIG 403 (404)
T ss_dssp TTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999999986
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=4.4e-54 Score=462.56 Aligned_cols=330 Identities=58% Similarity=0.963 Sum_probs=308.1
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEeecCCcceEEEEEcCceeEeChhhhHHHHHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISSMVLTKMREI 80 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~~ 80 (655)
+|..|+.++.++|.++++++||+||++++|+.++..++.|||.++..+|.+.+.+.++++...++|+++++++|+++++.
T Consensus 65 vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~ 144 (394)
T 3qfu_A 65 IGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQI 144 (394)
T ss_dssp ESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHH
T ss_pred ecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999988999999999888888999999999999999999
Q ss_pred HHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHHH
Q psy3270 81 AEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSMR 160 (655)
Q Consensus 81 ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l~ 160 (655)
|+.+++.++.++
T Consensus 145 a~~~~~~~~~~~-------------------------------------------------------------------- 156 (394)
T 3qfu_A 145 AEDYLGTKVTHA-------------------------------------------------------------------- 156 (394)
T ss_dssp HHHHHTSCCCEE--------------------------------------------------------------------
T ss_pred HHHhcCCCcceE--------------------------------------------------------------------
Confidence 999988766666
Q ss_pred HHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEE
Q psy3270 161 EIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVS 240 (655)
Q Consensus 161 ~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvs 240 (655)
|+|||++|++.||+++++|++.||++++.+++||+|||++|+.... ..+..++|||+||||||++
T Consensus 157 --------------vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~vlV~D~Gggt~dvs 221 (394)
T 3qfu_A 157 --------------VVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKS-DKEHQIIVYDLGGGTFDVS 221 (394)
T ss_dssp --------------EEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSC-SSCEEEEEEEECSSCEEEE
T ss_pred --------------EEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccC-CCCceEEEEEcCCCceeEE
Confidence 5566666778888888999999999999999999999999987653 3578899999999999999
Q ss_pred EEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEEEEccc
Q psy3270 241 VLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASLEIDAL 320 (655)
Q Consensus 241 v~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~~~ 320 (655)
++++.++ .++++++.++..+||.+||+.|.+++.+.|..+++.++..+++.+.+|+.+||++|+.||......+.++.+
T Consensus 222 v~~~~~~-~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~ 300 (394)
T 3qfu_A 222 LLSIENG-VFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSF 300 (394)
T ss_dssp EEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEE
T ss_pred EEEEeCC-EEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEec
Confidence 9999988 999999999999999999999999999999999999888899999999999999999999999999999888
Q ss_pred cCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchh
Q psy3270 321 HEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDE 400 (655)
Q Consensus 321 ~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ 400 (655)
.++.++...++|++|+++++++++++...|.++|+.+++...+++.|+|+||+|++|+|++.|++.|++.++..+.||++
T Consensus 301 ~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ 380 (394)
T 3qfu_A 301 VDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDE 380 (394)
T ss_dssp ETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTT
T ss_pred cCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHH
Confidence 88889999999999999999999999999999999999998899999999999999999999999997788889999999
Q ss_pred HHHhHHHHHHHHHc
Q psy3270 401 AVAYGAAVQAAILS 414 (655)
Q Consensus 401 ava~GAa~~a~~l~ 414 (655)
|||+|||++|+.++
T Consensus 381 ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 381 AVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=5.6e-53 Score=455.80 Aligned_cols=330 Identities=33% Similarity=0.496 Sum_probs=294.8
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEeecCCcceEEEEEc----CceeEeChhhhHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYK----GEIKKFAPEEISSMVLTK 76 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~ev~a~~l~~ 76 (655)
+|..|++++.++|+++++++||+||++++++.++.. .+++.+...+|.+.+.+... ++.+.++|++|++++|++
T Consensus 60 ~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~~~~--~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~ 137 (409)
T 4gni_A 60 YGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDPTHN--HASAHPQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRR 137 (409)
T ss_dssp EHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCCGGG--TTSCCCEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHH
T ss_pred EcHHHHHhhHhChHhhHHHHHHHhCCCccchhhhhh--ccccceecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHH
Confidence 588999999999999999999999999998876654 45666677788888887765 356799999999999999
Q ss_pred HHHHHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchh
Q psy3270 77 MREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFD 156 (655)
Q Consensus 77 l~~~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~ 156 (655)
+++.|+.+++.++.++
T Consensus 138 l~~~a~~~~~~~~~~~---------------------------------------------------------------- 153 (409)
T 4gni_A 138 LVGAASEYLGKKVTSA---------------------------------------------------------------- 153 (409)
T ss_dssp HHHHHHHHHTSCCCEE----------------------------------------------------------------
T ss_pred HHHHHHHHhCCCCCeE----------------------------------------------------------------
Confidence 9999999888766655
Q ss_pred hHHHHHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHccccc-ccCCCceEEEEEeCCc
Q psy3270 157 VSMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDK-NLKGEKNVLIFDLGGG 235 (655)
Q Consensus 157 ~~l~~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~-~~~~~~~vlV~D~Ggg 235 (655)
|+|||++|++.||+++++|++.||++++.+++||+|||++|+... ....+.+++|||+|||
T Consensus 154 ------------------vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgG 215 (409)
T 4gni_A 154 ------------------VITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGS 215 (409)
T ss_dssp ------------------EEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSS
T ss_pred ------------------EEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCC
Confidence 666666677888889999999999999999999999999998864 2346789999999999
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhcc--ccccccHHHHHHHHHHHHHHHHhcCCCCce
Q psy3270 236 TFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHK--KDILANTRAVRRLRTACERAKRTLSSSTEA 313 (655)
Q Consensus 236 T~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~ 313 (655)
|||++++++.++ .++++++.++..+||.+||+.|.+++.+.|..+++ .++..+++.+.+|+.+||++|+.||.....
T Consensus 216 T~dvsv~~~~~~-~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~ 294 (409)
T 4gni_A 216 RSDVTVLASRSG-MYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNA 294 (409)
T ss_dssp CEEEEEEEEETT-EEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEE
T ss_pred ceEEEEEEEeCC-eEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCce
Confidence 999999999988 99999999999999999999999999999999888 788889999999999999999999999999
Q ss_pred EEEEccccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCC-cc
Q psy3270 314 SLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGK-SL 392 (655)
Q Consensus 314 ~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~-~v 392 (655)
.+.++.+.++.++...|||++|+++++|+++++..+|+++|+.+++...+|+.|+||||+|++|+|++.|++.|+.. .+
T Consensus 295 ~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v 374 (409)
T 4gni_A 295 SFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRI 374 (409)
T ss_dssp EEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEE
T ss_pred EEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCcccc
Confidence 99999888899999999999999999999999999999999999999889999999999999999999999999644 34
Q ss_pred ------cCCCCchhHHHhHHHHHHHHHcC
Q psy3270 393 ------NLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 393 ------~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
....||++|||+|||++|+....
T Consensus 375 ~~P~~~~~~~~p~~ava~GAa~~~~~~~~ 403 (409)
T 4gni_A 375 LAPSTDPSALNPSELQARGAALQASLIQE 403 (409)
T ss_dssp ESTTTCTTCCCTTTHHHHHHHHHHHHHHC
T ss_pred ccccccCCCcCHHHHHHHHHHHHhhhhhh
Confidence 57789999999999999987754
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.2e-51 Score=439.68 Aligned_cols=325 Identities=51% Similarity=0.834 Sum_probs=287.4
Q ss_pred CChhhHHhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEe-ecCCcceEEEEEcCceeEeChhhhHHHHHHHHHH
Q psy3270 1 MPISLDLSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVV-SDGGKPKIQVEYKGEIKKFAPEEISSMVLTKMRE 79 (655)
Q Consensus 1 ~g~~a~~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~ 79 (655)
+|..|+++..++|+++++++||+||+.++|+.++..++.+||.++ ..+|.+.+.+ +| +.++|+++++++|+++++
T Consensus 50 ~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~ 125 (383)
T 1dkg_D 50 VGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKK 125 (383)
T ss_dssp ESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHHHHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHH
T ss_pred ECHHHHHhhhhCccceeehhHHhhCCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999987 4566666655 55 589999999999999999
Q ss_pred HHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 80 IAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 80 ~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
.|+.+++.++.++
T Consensus 126 ~a~~~~~~~~~~~------------------------------------------------------------------- 138 (383)
T 1dkg_D 126 TAEDYLGEPVTEA------------------------------------------------------------------- 138 (383)
T ss_dssp HHHHHHSSCCCEE-------------------------------------------------------------------
T ss_pred HHHHHhCCCCCeE-------------------------------------------------------------------
Confidence 9999887666666
Q ss_pred HHHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEE
Q psy3270 160 REIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDV 239 (655)
Q Consensus 160 ~~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dv 239 (655)
|+|||++|++.||+++++|++.||++++.+++||+|||++|+.... ..+.+++|||+||||||+
T Consensus 139 ---------------vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lVvD~Gggttdv 202 (383)
T 1dkg_D 139 ---------------VITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDI 202 (383)
T ss_dssp ---------------EECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC--CCEEEEEEEEECSSCEEE
T ss_pred ---------------EEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccC-CCCcEEEEEEcCCCeEEE
Confidence 5555666677888888899999999999999999999999987643 256789999999999999
Q ss_pred EEEEEe----CCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3270 240 SVLAID----EGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASL 315 (655)
Q Consensus 240 sv~~~~----~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i 315 (655)
++++.. ++ .++++++.++..+||.+||+.|.+++.+++..+++.++..+++.+.+|+..||++|+.||......+
T Consensus 203 sv~~~~~~~~~~-~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i 281 (383)
T 1dkg_D 203 SIIEIDEVDGEK-TFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDV 281 (383)
T ss_dssp EEEEEEC----C-CCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred EEEEEEecCCCC-eEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 999987 45 7888888888899999999999999999999888888888899999999999999999999888888
Q ss_pred EEccccC---C-cceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCc
Q psy3270 316 EIDALHE---G-IDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKS 391 (655)
Q Consensus 316 ~i~~~~~---~-~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~ 391 (655)
.++.+.+ | .++..+|+|++|+++++|+++++.+.|.++|+.+++...+++.|+|+||+|++|+|+++|++.| +.+
T Consensus 282 ~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~ 360 (383)
T 1dkg_D 282 NLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKE 360 (383)
T ss_dssp EEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSC
T ss_pred EEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCC
Confidence 7765443 2 4566799999999999999999999999999999988889999999999999999999999999 567
Q ss_pred ccCCCCchhHHHhHHHHHHHHHc
Q psy3270 392 LNLSINPDEAVAYGAAVQAAILS 414 (655)
Q Consensus 392 v~~~~~p~~ava~GAa~~a~~l~ 414 (655)
+..+.||++|||+|||++|+.|+
T Consensus 361 v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 361 PRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp CBCSSCTTTHHHHHHHHHTTTTC
T ss_pred CCCCcChHHHHHHHHHHHHHhhC
Confidence 88889999999999999997653
No 10
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=4.9e-40 Score=318.11 Aligned_cols=216 Identities=47% Similarity=0.738 Sum_probs=206.3
Q ss_pred eEeeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCcccccCCcceeeEEecCCCCCCCC
Q psy3270 424 VLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRG 503 (655)
Q Consensus 424 ~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g 503 (655)
+++.|++|+|+|+++.+|.|.+|||||++||++++.+|+|..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|
T Consensus 1 ~~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G 80 (219)
T 4e81_A 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRG 80 (219)
T ss_dssp CCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTT
T ss_pred CeEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHHHHHHHHH
Q psy3270 504 VPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLESYAFAVK 583 (655)
Q Consensus 504 ~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r 583 (655)
.+.|+|+|.+|.||+|+|++.++.||+..+++|.+. .+||++||++++++++++..+|++.+++.++||.||+|+|.+|
T Consensus 81 ~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~ 159 (219)
T 4e81_A 81 MPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTR 159 (219)
T ss_dssp CSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999886 5699999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHHHHHhccCCccCHHHHHHHHHHHHHHHHHHHHHHHh
Q psy3270 584 QAAEDSGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTLQQTCTPIMTKLHQ 643 (655)
Q Consensus 584 ~~l~~~~~~~~~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e 643 (655)
+.|.+...++++++++++.+.++++++||+++ +.++|++++++|++.+.|+..|+++
T Consensus 160 ~~l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 160 KQVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99987557899999999999999999999987 7899999999999999999999887
No 11
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=3.4e-37 Score=301.56 Aligned_cols=214 Identities=31% Similarity=0.529 Sum_probs=204.0
Q ss_pred eecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCcccccCCcceeeEEecCCCCCCCCCCe
Q psy3270 427 VDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPK 506 (655)
Q Consensus 427 ~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~ 506 (655)
.|++|+|||+++.+|.|.+|||+|++||++++.+|+|..|+|+.+.|.+|||++..+.+|..||+|.|.|+||+|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHHHHHHHHHHHH
Q psy3270 507 IEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAA 586 (655)
Q Consensus 507 i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l 586 (655)
|+|+|.+|.||+|+|++.+..||+..+++|... .+||+++++++++++.+|..+|+..+++.++||+||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887 5699999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHhccCCccCHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3270 587 EDSGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTLQQTCTPIMTKLHQA 644 (655)
Q Consensus 587 ~~~~~~~~~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~ 644 (655)
.+...++++++++++.+.++++++||+++ +.++|++++++|++++.||..|+++.
T Consensus 160 ~~~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~ 214 (227)
T 1u00_A 160 AADAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQ 214 (227)
T ss_dssp HHHGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87557899999999999999999999964 58999999999999999999987653
No 12
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.4e-33 Score=296.97 Aligned_cols=220 Identities=25% Similarity=0.373 Sum_probs=182.1
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceEEE
Q psy3270 173 EAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQV 252 (655)
Q Consensus 173 ~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v 252 (655)
.+|+|||++|+..||+++++|++.||++++.+++||+|||++|+.... .+.+++|||+||||||+++++... .+
T Consensus 97 ~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~--~~~~~lVvDiGggttdvsv~~~~~--~~-- 170 (344)
T 1jce_A 97 RVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVE--EPSGNMVVDIGGGTTEVAVISLGS--IV-- 170 (344)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTT--SSSCEEEEEECSSCEEEEEEETTE--EE--
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCC--CCceEEEEEeCCCeEEEEEEEcCC--EE--
Confidence 568888999999999999999999999999999999999999987643 567899999999999999997532 22
Q ss_pred EEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCc------eEEEEc--cccCCc
Q psy3270 253 KSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTE------ASLEID--ALHEGI 324 (655)
Q Consensus 253 ~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~------~~i~i~--~~~~~~ 324 (655)
..++..+||.+||+.|.+++.+++. .++. +..||++|+.|+.... ..+.++ .+.++.
T Consensus 171 --~~~~~~lGG~~id~~l~~~l~~~~~----~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 235 (344)
T 1jce_A 171 --TWESIRIAGDEMDEAIVQYVRETYR----VAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGL 235 (344)
T ss_dssp --EEEEESCSHHHHHHHHHHHHHHHHC----EECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTE
T ss_pred --eeCCCCccChhHHHHHHHHHHHHhC----cccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCC
Confidence 2355789999999999999977653 2221 3569999999987542 244443 344666
Q ss_pred ceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCC--CCCc-ceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhH
Q psy3270 325 DFYSKITRARFEELCMDLFRQTLAPVERALNDAKLD--KGSI-HDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEA 401 (655)
Q Consensus 325 ~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~a 401 (655)
+..++++|++|+++++|+++++.+.|.++|+.++.. .+.+ +.|+|+||+|++|+|+++|++.| +.++..+.||+++
T Consensus 236 ~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~a 314 (344)
T 1jce_A 236 PRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTA 314 (344)
T ss_dssp EEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTH
T ss_pred ceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHH
Confidence 778899999999999999999999999999987532 2224 68999999999999999999999 5678888899999
Q ss_pred HHhHHHHHHHHHc
Q psy3270 402 VAYGAAVQAAILS 414 (655)
Q Consensus 402 va~GAa~~a~~l~ 414 (655)
||+||+++++.++
T Consensus 315 va~Gaa~~a~~~~ 327 (344)
T 1jce_A 315 VAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHGGGCHH
T ss_pred HHHHHHHHHhChH
Confidence 9999999997554
No 13
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-33 Score=259.92 Aligned_cols=165 Identities=55% Similarity=0.843 Sum_probs=154.3
Q ss_pred ccCeEeeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCcccccCCcceeeEEecCCCCC
Q psy3270 421 IQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPA 500 (655)
Q Consensus 421 ~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~ 500 (655)
...+.+.|++|+|||+++.+|.|.+|||||++||++++.+|+|..|+|+.+.|.+|||++..+.+|..||+|.|.|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHHHHHH
Q psy3270 501 PRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLESYAF 580 (655)
Q Consensus 501 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy 580 (655)
|+|.++|+|+|++|.||+|+|++.++.||++.+++|.+. .+||++|++++++++++++++|++.+++.++||+||+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy 175 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH 175 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 8899999999999999999999999999999999999999
Q ss_pred HHHHHH
Q psy3270 581 AVKQAA 586 (655)
Q Consensus 581 ~~r~~l 586 (655)
.+|+.|
T Consensus 176 ~~~~~l 181 (182)
T 3n8e_A 176 DTETKM 181 (182)
T ss_dssp CCSCCC
T ss_pred HHHHhh
Confidence 998755
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.97 E-value=1.6e-30 Score=236.91 Aligned_cols=151 Identities=64% Similarity=1.001 Sum_probs=146.6
Q ss_pred eeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCcccccCCcceeeEEecCCCCCCCCCC
Q psy3270 426 LVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVP 505 (655)
Q Consensus 426 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 505 (655)
+.|++|+|+|+++.+|.|.+|||||++||++++.+|+|..|+|+.+.|.+|||++..+.+|..||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHH
Q psy3270 506 KIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLE 576 (655)
Q Consensus 506 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 576 (655)
+|+|+|++|.||+|+|++.++.||+..+++|.++.++||++|++++++++++|+.+|+..+++.++||+||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987889999999999999999999999999999999886
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.97 E-value=1.2e-30 Score=237.33 Aligned_cols=151 Identities=71% Similarity=1.102 Sum_probs=142.1
Q ss_pred eeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCcccccCCcceeeEEecCCCCCCCCCC
Q psy3270 426 LVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVP 505 (655)
Q Consensus 426 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 505 (655)
+.|++|+|+|+++.+|.|.++||||++||++++.+|+|..|+|+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHH
Q psy3270 506 KIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLE 576 (655)
Q Consensus 506 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 576 (655)
+|+|+|++|.||+|+|++.++.||+..+++|.++.+.||++|++++++++++++++|++.+++.++||.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987889999999999999999999999999999999875
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.96 E-value=2e-30 Score=235.53 Aligned_cols=150 Identities=59% Similarity=0.934 Sum_probs=144.0
Q ss_pred eeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCcccccCCcceeeEEecCCCCCCCCCC
Q psy3270 426 LVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVP 505 (655)
Q Consensus 426 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 505 (655)
+.|++|+|+|+++.+|.|.++||||++||++++.+|+|..|+|+.+.|.+|||++..+.+|.+||+|.|.|+||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHH
Q psy3270 506 KIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLE 576 (655)
Q Consensus 506 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 576 (655)
+|+|+|++|.||+|+|++.++.||+..+++|.+. .+||++|++++++++++++++|++.+++.++||+||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988 889999999999999999999999999999998875
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.95 E-value=2.4e-28 Score=224.16 Aligned_cols=151 Identities=57% Similarity=0.966 Sum_probs=145.4
Q ss_pred eeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCcccccCCcceeeEEecCCCCCCCCCC
Q psy3270 426 LVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVP 505 (655)
Q Consensus 426 ~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 505 (655)
+.|++|+|||+++.+|.|.+||++|++||++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||+|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHH
Q psy3270 506 KIEVTFDLDANGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLE 576 (655)
Q Consensus 506 ~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LE 576 (655)
+|+|+|++|.||+|+|++.+..||+...++|....++||++|++++++++.+|+.+|+..+++.++||+||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999887789999999999999999999999999999999875
No 18
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=3.9e-26 Score=244.39 Aligned_cols=311 Identities=13% Similarity=0.095 Sum_probs=206.4
Q ss_pred eChhhhHHHHHHHHHHHHHHHhCCCCce-EEEecCCC--CCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccC
Q psy3270 64 FAPEEISSMVLTKMREIAEVYLGGKVSE-AVITVPAY--FNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLK 140 (655)
Q Consensus 64 ~~~~ev~a~~l~~l~~~ae~~~~~~i~~-~vitvP~~--f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~ 140 (655)
+.-.+-++..++++++.||..+|.++++ +++++|+. .-..... -. ...++...+-.+....++..+....+.
T Consensus 50 I~di~~~~~~I~~av~~ae~~~g~~i~~~v~v~i~g~~~~i~s~~~----~~-~i~~~~~~i~~~di~~~i~~a~~~~~p 124 (419)
T 4a2a_A 50 IKDAIAFKESVNTLLKELEEQLQKSLRSDFVISFSSVSFEREDTVI----ER-DFGEEKRSITLDILSEMQSEALEKLKE 124 (419)
T ss_dssp ESBHHHHHHHHHHHHHHHHHHHTSCCCSEEEEEECCTTCEEEEEEE----EE-ECCSSCEECCHHHHHHHHHHHHHHHSC
T ss_pred EEcHHHHHHHHHHHHHHHHHHcCCCcCceEEEEEcCCcCeEEEEEe----EE-EEeCCCCEECHHHHHHHHHHhhhhcCC
Confidence 4444555899999999999999999999 99999998 2100000 00 000011122222233333333322233
Q ss_pred CCeeEEEEeccccchhhHH-HHHHHHHhcC--CcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHccc
Q psy3270 141 GEKNVLIFDLGGGTFDVSM-REIAEVYLGG--KVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGL 217 (655)
Q Consensus 141 ~~~~~~~~d~g~~~~~~~l-~~~a~~~~~~--~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~ 217 (655)
.+...+-+-+..+.++..- .....-..|. .+.-.+++.| ....+.+.+|++.|||++..++.||+|||++|+.
T Consensus 125 ~d~~~l~~~p~~f~vDg~~~i~~P~Gm~g~~l~~~v~~v~~~----~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~ 200 (419)
T 4a2a_A 125 NGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSIVVP----LKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLT 200 (419)
T ss_dssp TTEEEEEEEEEEEEETTTEEESCCTTCEESEEEEEEEEEEEE----HHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCC
T ss_pred CCCEEEEEEeeEEEECCccCcCCCCCCcccEEEEEEEEEEEe----HHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhc
Confidence 3333332222222222100 0000000111 1233445554 4567889999999999999999999999999876
Q ss_pred ccccCCCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHH
Q psy3270 218 DKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLR 297 (655)
Q Consensus 218 ~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 297 (655)
... .+.+++|+|+||||||+++++ +| .+.. .++.++||++||+.|...+. ...
T Consensus 201 ~~~--~~~gv~vvDiGggttdisi~~--~g-~~~~---~~~i~~GG~~it~dIa~~l~-------------------~~~ 253 (419)
T 4a2a_A 201 TPE--KDRGVVVVNLGYNFTGLIAYK--NG-VPIK---ISYVPVGMKHVIKDVSAVLD-------------------TSF 253 (419)
T ss_dssp HHH--HHHCEEEEEECSSSEEEEEEE--TT-EEEE---EEEESCCHHHHHHHHHHHHT-------------------CCH
T ss_pred ccc--ccCCEEEEEECCCcEEEEEEE--CC-EEEE---EEecccHHHHHHHHHHHHHC-------------------CCH
Confidence 543 456899999999999999987 45 3332 23478999999999987541 124
Q ss_pred HHHHHHHHhcCCC-----CceEEEEccccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCC------CCCCcce
Q psy3270 298 TACERAKRTLSSS-----TEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKL------DKGSIHD 366 (655)
Q Consensus 298 ~~~e~~K~~ls~~-----~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~------~~~~i~~ 366 (655)
..||++|+.++.. ....+.++...+ .....++|++|.++++|++++++..|++.|+.++. ....++.
T Consensus 254 ~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~ 331 (419)
T 4a2a_A 254 EESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGG 331 (419)
T ss_dssp HHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTC
T ss_pred HHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCE
Confidence 5799999998742 345677765533 35678999999999999999999999999999987 3456899
Q ss_pred EEEecCccchHHHHHHHHhhhCCCcccCC-----------------CCchhHHHhHHHHHHHHH
Q psy3270 367 VVLVGGSIRIPKIQKMLQDFFNGKSLNLS-----------------INPDEAVAYGAAVQAAIL 413 (655)
Q Consensus 367 ViLvGG~s~~p~v~~~l~~~f~~~~v~~~-----------------~~p~~ava~GAa~~a~~l 413 (655)
|+|+||+|++|++++++++.| +.+++.. .+|.++++.|.++++...
T Consensus 332 IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 332 VVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp EEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred EEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhhc
Confidence 999999999999999999999 4544322 389999999999988543
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.91 E-value=3.6e-24 Score=228.01 Aligned_cols=227 Identities=21% Similarity=0.239 Sum_probs=153.9
Q ss_pred HHHHHHHHHhcCCcceEEEEeCCCCC------------------HHHHHHHHHHHHHcCCcceeecChHHHHHHHccccc
Q psy3270 158 SMREIAEVYLGGKVSEAVITVPAYFN------------------DSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDK 219 (655)
Q Consensus 158 ~l~~~a~~~~~~~~~~~vitVPa~~~------------------~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~ 219 (655)
.+...++.+++.++.++++++|..=. ....+++++|++.||+++..++.||+|||++|+...
T Consensus 106 ~i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~ 185 (377)
T 2ych_A 106 AVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARL 185 (377)
T ss_dssp HHHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHH
T ss_pred HHHHHHhhcCCCChhHceEEEEEeCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhc
Confidence 34445667777777778887762111 122488999999999999999999999999986543
Q ss_pred ccCCCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHH
Q psy3270 220 NLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTA 299 (655)
Q Consensus 220 ~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 299 (655)
....+.+++|+|+||||||+++++ .| ... ..++..+||.+||+.|.+.+ +.+ ...
T Consensus 186 ~~~~~~~~~vvDiGggttdi~i~~--~g-~~~---~~~~~~~GG~~i~~~i~~~~--------~~~-----------~~~ 240 (377)
T 2ych_A 186 AEEPDRVFLVLDIGAESTSLVLLR--GD-KPL---AVRVLTLSGKDFTEAIARSF--------NLD-----------LLA 240 (377)
T ss_dssp HTSTTCEEEEEEECSSCEEEEEEE--TT-EEE---EEEEESCSHHHHHHHHHHHT--------TCC-----------HHH
T ss_pred ccccCCeEEEEEECCCcEEEEEEE--CC-EEE---EEEeeechHHHHHHHHHHHh--------CCC-----------HHH
Confidence 223467899999999999999997 34 222 23457899999999997632 222 347
Q ss_pred HHHHHHhcCCCCceEEEEccccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHc--CCCCCCcceEEEecCccchH
Q psy3270 300 CERAKRTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDA--KLDKGSIHDVVLVGGSIRIP 377 (655)
Q Consensus 300 ~e~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~ViLvGG~s~~p 377 (655)
||++|+.++.............+-......++|++|+++++++++++...|++.|+.. +.....++.|+|+||+|++|
T Consensus 241 aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p 320 (377)
T 2ych_A 241 AEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLR 320 (377)
T ss_dssp HHHHHHHTC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGST
T ss_pred HHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccch
Confidence 9999999875432111100000001134578999999999999999999999999863 55566799999999999999
Q ss_pred HHHHHHHhhhCCCcccCC--------------------CCchhHHHhHHHHHH
Q psy3270 378 KIQKMLQDFFNGKSLNLS--------------------INPDEAVAYGAAVQA 410 (655)
Q Consensus 378 ~v~~~l~~~f~~~~v~~~--------------------~~p~~ava~GAa~~a 410 (655)
++++.+++.| +.++... .+|..++|.|+|+++
T Consensus 321 ~l~~~l~~~l-~~~v~~~~P~~~v~~~~~~~~~~~l~~~~p~~a~a~Glal~~ 372 (377)
T 2ych_A 321 GLASLLTDTL-GVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRG 372 (377)
T ss_dssp THHHHHHHHH-TSEEEECCGGGGSBCCTTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHh-CCCeEecCchhhcccCcccCCHHHHHhhhHHHHHHHHHHHcC
Confidence 9999999999 4443322 245567888888876
No 20
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.90 E-value=2.1e-23 Score=211.80 Aligned_cols=194 Identities=22% Similarity=0.363 Sum_probs=164.9
Q ss_pred HHHHHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCcee
Q psy3270 158 SMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTF 237 (655)
Q Consensus 158 ~l~~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~ 237 (655)
.+.+.++.+.+.+...+++|+|++|...+|+.+.++++.+|+++..++.||+|++++++.. ..+|+|+|||||
T Consensus 79 ~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-------~~~viDiGggst 151 (272)
T 3h1q_A 79 ELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-------DGIVVDIGGGTT 151 (272)
T ss_dssp HHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-------SEEEEEECSSCE
T ss_pred HHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-------CEEEEEECCCcE
Confidence 5566777788888999999999999999999999999999999999999999999998753 259999999999
Q ss_pred EEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEEEE
Q psy3270 238 DVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASLEI 317 (655)
Q Consensus 238 dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i 317 (655)
+++++. .+ ... ......+||.+||+.+.+++. . -...+|++|+.++
T Consensus 152 ~~~~~~--~g-~~~---~~~~~~~Gg~~~~~~l~~~l~--------~-----------~~~~ae~~k~~~~--------- 197 (272)
T 3h1q_A 152 GIAVIE--KG-KIT---ATFDEPTGGTHLSLVLAGSYK--------I-----------PFEEAETIKKDFS--------- 197 (272)
T ss_dssp EEEEEE--TT-EEE---EECCBSCCHHHHHHHHHHHHT--------C-----------CHHHHHHHHHSST---------
T ss_pred EEEEEE--CC-EEE---EEecCCCcHHHHHHHHHHHhC--------C-----------CHHHHHHHHHhcC---------
Confidence 999986 44 222 335678999999999988762 1 1246889998875
Q ss_pred ccccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCC
Q psy3270 318 DALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSIN 397 (655)
Q Consensus 318 ~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~ 397 (655)
+++++++++.++++++...+.+.++..+ +++.|+|+||+|++|++++.+++.| +.++..+.+
T Consensus 198 -------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~~~v~~~~~ 259 (272)
T 3h1q_A 198 -------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-GKEVQVPIH 259 (272)
T ss_dssp -------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-SSCCBCCSS
T ss_pred -------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-CCCccccCC
Confidence 6899999999999999999999998764 4778999999999999999999999 678888899
Q ss_pred chhHHHhHHHHHH
Q psy3270 398 PDEAVAYGAAVQA 410 (655)
Q Consensus 398 p~~ava~GAa~~a 410 (655)
|++++|+|||++|
T Consensus 260 p~~a~a~Gaal~a 272 (272)
T 3h1q_A 260 PLLVTPLGIALFG 272 (272)
T ss_dssp GGGHHHHHHHTTC
T ss_pred hHHHHHHHHHhcC
Confidence 9999999999864
No 21
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.88 E-value=1.3e-22 Score=180.88 Aligned_cols=119 Identities=59% Similarity=0.937 Sum_probs=109.5
Q ss_pred ccCeEeeecccCCCCccccCcEEEEEEecCCccCcceeEEEEeecCCCceeEEEEEecCcccccCCcceeeEEecCCCCC
Q psy3270 421 IQDVLLVDVAPLSLGIETAGGVMTKIVERNSRIPCKQQQTFTTYSDNQNAVTIQVFEGERAMTKDNNLLGTFNLTGIPPA 500 (655)
Q Consensus 421 ~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~ 500 (655)
.+++.+.|++|++||+++.++.|.++|+||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||+
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEeCCCeeEEEEEEeccCCCceeeeeecC
Q psy3270 501 PRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQND 539 (655)
Q Consensus 501 ~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~ 539 (655)
|+|.++|+|+|++|.||+|+|++.++.||++..++|+++
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999999999876
No 22
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.88 E-value=1.1e-22 Score=213.15 Aligned_cols=203 Identities=17% Similarity=0.110 Sum_probs=154.6
Q ss_pred ceEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CcceeecChHHHHHHHcccccccC-CCceEEEEEeCC
Q psy3270 172 SEAV--ITVPAYFNDSQRQATKDAGSIA--------G------LNVLRIINEPTAAALAYGLDKNLK-GEKNVLIFDLGG 234 (655)
Q Consensus 172 ~~~v--itVPa~~~~~~r~~~~~a~~~A--------G------l~~~~li~Ep~Aaal~~~~~~~~~-~~~~vlV~D~Gg 234 (655)
.++| ++||++|+..||+++++++..+ | ++.+++++||+|||++|....... ...+++|+|+||
T Consensus 120 ~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGg 199 (346)
T 2fsj_A 120 VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGS 199 (346)
T ss_dssp EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECS
T ss_pred eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHhhccccccccCCcEEEEECCC
Confidence 5699 9999999999999999997776 4 356889999999999982211111 346789999999
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccc--cccccHHHHHHHHHHHHHHHHhcCCCCc
Q psy3270 235 GTFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKK--DILANTRAVRRLRTACERAKRTLSSSTE 312 (655)
Q Consensus 235 gT~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~e~~K~~ls~~~~ 312 (655)
||||++++++.++ . .+..+.++.++||.+|++.|.+++.+++ +. ++. ...+| . .
T Consensus 200 GTtDv~vi~~~~g-~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~----g~~~~i~---------~~~~e-------~--~ 255 (346)
T 2fsj_A 200 RTTDVLTINLMDM-E-PVVELSFSLQIGVGDAISALSRKIAKET----GFVVPFD---------LAQEA-------L--S 255 (346)
T ss_dssp SCEEEEEEETTTT-E-ECGGGCEEESCCHHHHHHHHHHHHHHHH----CCCCCHH---------HHHHH-------T--T
T ss_pred CcEEEEEEEecCC-E-EEeecCCCcchhHHHHHHHHHHHHHHHh----CCCcCCC---------HHHHh-------c--C
Confidence 9999999988666 4 4555567788999999999988776554 33 221 01122 1 1
Q ss_pred eEEEEccccCCcceEEeecHHHH-HHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCc
Q psy3270 313 ASLEIDALHEGIDFYSKITRARF-EELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKS 391 (655)
Q Consensus 313 ~~i~i~~~~~~~~~~~~itr~~~-e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~ 391 (655)
..+.+. +. .++++++ +++++++++++.+.|++.|+.+ .+.++.|+|+||+|++ +++.+++.|+...
T Consensus 256 ~~~~~~----g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~ 322 (346)
T 2fsj_A 256 HPVMFR----QK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTL 322 (346)
T ss_dssp SCEEET----TE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTCB
T ss_pred CeEeEC----Cc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcCcE
Confidence 123332 22 3568999 9999999999999999999876 4568999999999999 9999999995322
Q ss_pred c-cCCCCchhHHHhHHHHHHH
Q psy3270 392 L-NLSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 392 v-~~~~~p~~ava~GAa~~a~ 411 (655)
+ ....||++|+|+|+..++.
T Consensus 323 i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 323 VKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp CCCCTTTTTTHHHHHHHHHHH
T ss_pred EeccCCCcHHHHHHHHHHHHh
Confidence 2 1267999999999998763
No 23
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.83 E-value=2.2e-20 Score=201.44 Aligned_cols=227 Identities=17% Similarity=0.131 Sum_probs=164.9
Q ss_pred cceEEEEeCCCCCHHHHHHHHHHH-HHcCCcceeecChHHHHHHH-cccccccCCCceEEEEEeCCceeEEEEEEEeCCc
Q psy3270 171 VSEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALA-YGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGS 248 (655)
Q Consensus 171 ~~~~vitVPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~Aaal~-~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~ 248 (655)
...+|+|+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |........+.+.+|+|+||||||++++. +|
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G- 183 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EG- 183 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TT-
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CC-
Confidence 467999999999999999999999 88999999999999999988 42111001122679999999999999985 44
Q ss_pred eEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCC-----------------
Q psy3270 249 LFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSST----------------- 311 (655)
Q Consensus 249 ~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~----------------- 311 (655)
. .+....++..+||++||+.|.+++.+++. ...... -...+|++|+.++...
T Consensus 184 ~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~ 252 (418)
T 1k8k_A 184 Y-VIGSCIKHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSKW 252 (418)
T ss_dssp E-ECGGGCEEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGT
T ss_pred E-EcccceEEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccccccc
Confidence 2 22233355789999999999999865421 111111 1235777887775321
Q ss_pred ceEEEEccccCCcceEEeecHHHH---HHHhhHHH------HhhhhHHHHHHHHcC--CCCCCcceEEEecCccchHHHH
Q psy3270 312 EASLEIDALHEGIDFYSKITRARF---EELCMDLF------RQTLAPVERALNDAK--LDKGSIHDVVLVGGSIRIPKIQ 380 (655)
Q Consensus 312 ~~~i~i~~~~~~~~~~~~itr~~~---e~~~~~~~------~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~s~~p~v~ 380 (655)
...+.++....+.+..++++++.| |.++.|.+ ..+.+.|.++|..+. +....++.|+|+||+|++|+++
T Consensus 253 ~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~ 332 (418)
T 1k8k_A 253 IKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFG 332 (418)
T ss_dssp CEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHH
T ss_pred ceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHH
Confidence 134566655555666789999999 66666643 467888999998765 3345678899999999999999
Q ss_pred HHHHhhhCCC-----------------------cccCCCCchhHHHhHHHHHHH
Q psy3270 381 KMLQDFFNGK-----------------------SLNLSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 381 ~~l~~~f~~~-----------------------~v~~~~~p~~ava~GAa~~a~ 411 (655)
++|++.|+.. ++..+.+|..++.+||+++|.
T Consensus 333 ~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 333 RRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred HHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 9998766211 122345778999999999985
No 24
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.82 E-value=5.4e-20 Score=195.25 Aligned_cols=214 Identities=18% Similarity=0.201 Sum_probs=153.8
Q ss_pred ceEEEEeCCCCCHHHHHHHHHHH-HHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceE
Q psy3270 172 SEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLF 250 (655)
Q Consensus 172 ~~~vitVPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~ 250 (655)
..+++|+|++++..+|+++.+++ +.+|++.+.+++||+|||++++. .+.+|+|+||||||++.+. +| .
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~lVvDiG~gtt~v~~v~--~G-~- 169 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVTHNVPIY--EG-Y- 169 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-------SSEEEEEECSSCEEEEEEE--TT-E-
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC-------CeEEEEEcCCCceEEeEeE--CC-E-
Confidence 45999999999999999888765 88899999999999999999974 3679999999999998764 45 2
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhc----------------CCCCceE
Q psy3270 251 QVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTL----------------SSSTEAS 314 (655)
Q Consensus 251 ~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~l----------------s~~~~~~ 314 (655)
.+....+...+||+++|+.|.+++..+. +......+.. .+|++|+.+ +......
T Consensus 170 ~~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~~~-------~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~ 239 (375)
T 2fxu_A 170 ALPHAIMRLDLAGRDLTDYLMKILTERG---YSFVTTAERE-------IVRDIKEKLCYVALDFENEMATAASSSSLEKS 239 (375)
T ss_dssp ECGGGCEEESCCHHHHHHHHHHHHHHHT---CCCCSHHHHH-------HHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEE
T ss_pred EeccceEEeccCHHHHHHHHHHHHHhcC---CCCCcHHHHH-------HHHHHHHHHHhhcccHHHHHHhhcccCccCeE
Confidence 2222234578999999999999987641 1111111112 244444443 2222334
Q ss_pred EEEccccCCcceEEeecHHHH---HHHhhHH-----HHhhhhHHHHHHHHcC--CCCCCcceEEEecCccchHHHHHHHH
Q psy3270 315 LEIDALHEGIDFYSKITRARF---EELCMDL-----FRQTLAPVERALNDAK--LDKGSIHDVVLVGGSIRIPKIQKMLQ 384 (655)
Q Consensus 315 i~i~~~~~~~~~~~~itr~~~---e~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~s~~p~v~~~l~ 384 (655)
+.++ ++. .+.++++.| |.+++|. ...+.+.|.+.|..+. +....++.|+|+||+|++|+++++|+
T Consensus 240 ~~lp---dg~--~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~ 314 (375)
T 2fxu_A 240 YELP---DGQ--VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQ 314 (375)
T ss_dssp EECT---TSC--EEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHH
T ss_pred EECC---CCC--EEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHH
Confidence 4443 332 457888877 4455653 3557788888888653 22344678999999999999999999
Q ss_pred hhhCC-------CcccCCCCchhHHHhHHHHHHH
Q psy3270 385 DFFNG-------KSLNLSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 385 ~~f~~-------~~v~~~~~p~~ava~GAa~~a~ 411 (655)
+.++. .++..+.+|..++++||+++|.
T Consensus 315 ~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 315 KEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 98831 2344567999999999999997
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.74 E-value=1.2e-18 Score=180.85 Aligned_cols=204 Identities=16% Similarity=0.202 Sum_probs=140.5
Q ss_pred ceEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCC
Q psy3270 172 SEAVITVPAY-FNDS--QR--QATKDA------------GSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGG 234 (655)
Q Consensus 172 ~~~vitVPa~-~~~~--~r--~~~~~a------------~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~Gg 234 (655)
..+|+++|.. |... |+ .++.+- ++.+++..+.+++||.||+++++... ..+..++|+|+||
T Consensus 96 ~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~~~~--~~~~~~~vvDiGg 173 (320)
T 2zgy_A 96 VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQEL--DELDSLLIIDLGG 173 (320)
T ss_dssp EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHHHHS--CTTCEEEEEEECS
T ss_pred EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhhccc--cCCCCEEEEEcCC
Confidence 3699999987 6531 21 222221 23445678899999999999987432 3567899999999
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHH-HHhcCCCCce
Q psy3270 235 GTFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERA-KRTLSSSTEA 313 (655)
Q Consensus 235 gT~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~-K~~ls~~~~~ 313 (655)
||||+++++ ++ .+.+....++.++||.+||+.|.+++.++ +.++. . ..+|++ |..- ...
T Consensus 174 gttd~~v~~--~g-~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i~--~-------~~ae~~lk~~~---~~~ 233 (320)
T 2zgy_A 174 TTLDISQVM--GK-LSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKGS--S-------YLADDIIIHRK---DNN 233 (320)
T ss_dssp SCEEEEEEE--GG-GCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGGG--H-------HHHHHHHHTTT---CHH
T ss_pred CeEEEEEEe--CC-eeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCCC--H-------HHHHHHHHHhh---hhh
Confidence 999999997 33 44455556778999999999999888532 22221 1 134444 3320 000
Q ss_pred EEEEccccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCC--c
Q psy3270 314 SLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGK--S 391 (655)
Q Consensus 314 ~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~--~ 391 (655)
......+ ..-+++++.+++++.++++++.|.+.++.. .+++.|+|+||+|++ +++.+++.|+.. +
T Consensus 234 --~~~~~i~-----~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~ 300 (320)
T 2zgy_A 234 --YLKQRIN-----DENKISIVTEAMNEALRKLEQRVLNTLNEF----SGYTHVMVIGGGAEL--ICDAVKKHTQIRDER 300 (320)
T ss_dssp --HHHHHSS-----SSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CCCCEEEEESTTHHH--HHHHHHHTSCCCGGG
T ss_pred --cccceec-----CchhhHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCeEEEECChHHH--HHHHHHHHhCCCCCc
Confidence 0000000 012456777778888888888887777652 468999999999998 999999999532 5
Q ss_pred ccCCCCchhHHHhHHHHHH
Q psy3270 392 LNLSINPDEAVAYGAAVQA 410 (655)
Q Consensus 392 v~~~~~p~~ava~GAa~~a 410 (655)
+....||++|+|+||+++|
T Consensus 301 ~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 301 FFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp EECCSCGGGHHHHHHHHHH
T ss_pred eeeCCCcHHHHHHHHHHhc
Confidence 6778899999999999875
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.59 E-value=5.3e-14 Score=142.58 Aligned_cols=182 Identities=19% Similarity=0.186 Sum_probs=120.9
Q ss_pred cCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3270 197 AGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFAD 276 (655)
Q Consensus 197 AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~ 276 (655)
++......|+||+|+++++..... ....|+|+|||+++++++. .+| .+......++...|+.+|++.+.+++.-
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~~----~~~~vl~lgG~~~~~~~~~-~~g-~~~~~~~~~~~~~g~G~f~d~~a~~l~~ 142 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFIIP----ETRTIIDIGGQDAKVLKLD-NNG-RLLNFLMNDKCAAGTGRFLDVMAKIIEV 142 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHST----TCCEEEEECSSCEEEEEEC-TTS-CEEEEEEECSCSTTSHHHHHHHHHHHTC
T ss_pred HhhCCCcccchHHHHHHHHHHhCC----CCCeEEEEcCCCceEEEEE-ecC-ceEEEEeCCCcCcchhhHHHHHHHHhcc
Confidence 556677889999999988765432 3457899999999999885 445 7787888888999999999999888743
Q ss_pred HHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEEEEccccCCcceE------EeecHHHHHHHhhHHHHhhhhHH
Q psy3270 277 EFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASLEIDALHEGIDFY------SKITRARFEELCMDLFRQTLAPV 350 (655)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~~~~~~~~~~------~~itr~~~e~~~~~~~~~i~~~i 350 (655)
.+.... +..+....... +.+. ...|. ..-.....++++..+.+.+.+.+
T Consensus 143 ~~~~~~---------------------~~~~~a~~~~~--i~~~--~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l 197 (276)
T 4ehu_A 143 DVSELG---------------------SISMNSQNEVS--ISST--CTVFAESEVISHLSENAKIEDIVAGIHTSVAKRV 197 (276)
T ss_dssp CGGGHH---------------------HHHTTCSSCCC--CCCC--SHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ChhhhH---------------------HHHhcCCCCCC--cCCc--cchhhhhHHHHhhhccccHHHHHHHHHHHHHHHH
Confidence 222110 00011111000 0000 00000 00001112455666666555555
Q ss_pred HHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHc
Q psy3270 351 ERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILS 414 (655)
Q Consensus 351 ~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~ 414 (655)
....... ..++.|+|+||.+++|.|++.+++.| +.++..+.+|++++|+|||++|....
T Consensus 198 ~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 198 SSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 5444433 34678999999999999999999999 78899999999999999999997544
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.55 E-value=5.3e-15 Score=154.72 Aligned_cols=205 Identities=15% Similarity=0.203 Sum_probs=138.0
Q ss_pred ceEEEEeCCCCCHHHH-HHHHHHHHHcCC------------cceeecChHHHHHHHcccccccC----CCceEEEEEeCC
Q psy3270 172 SEAVITVPAYFNDSQR-QATKDAGSIAGL------------NVLRIINEPTAAALAYGLDKNLK----GEKNVLIFDLGG 234 (655)
Q Consensus 172 ~~~vitVPa~~~~~~r-~~~~~a~~~AGl------------~~~~li~Ep~Aaal~~~~~~~~~----~~~~vlV~D~Gg 234 (655)
..+++++|..+...+| .++++++..++- ..+.+++||.||+++++...... .+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 4789999999988887 589998876543 56889999999999997653211 367899999999
Q ss_pred ceeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceE
Q psy3270 235 GTFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEAS 314 (655)
Q Consensus 235 gT~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~ 314 (655)
||||++++. ++ .+ +...++...+||..+++.+.+++.+++. +..+. .. ..++-+.
T Consensus 194 gTtd~~v~~--~~-~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~~-------~i~~g~~--------- 248 (355)
T 3js6_A 194 GTTIIDTYQ--NM-KR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--PR-------MIEKGLE--------- 248 (355)
T ss_dssp SCEEEEEEE--TT-EE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--HH-------HHHSCCC---------
T ss_pred CcEEEEEEc--CC-EE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--HH-------HHhcCCc---------
Confidence 999999983 44 22 1112233579999999999999876532 11111 10 1111110
Q ss_pred EEEccccCCcc--eEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHH--HHHHHHhhhCCC
Q psy3270 315 LEIDALHEGID--FYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPK--IQKMLQDFFNGK 390 (655)
Q Consensus 315 i~i~~~~~~~~--~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--v~~~l~~~f~~~ 390 (655)
+.. .+.+ -...+ .+.+++.++++++++++.|++.+.+ ++.++.|+|+||++.++. |.+.+++.|+..
T Consensus 249 ~~~----~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~ 319 (355)
T 3js6_A 249 YKQ----CKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA 319 (355)
T ss_dssp -----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC
T ss_pred ccc----ccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC
Confidence 000 0000 01112 2345666777777777777777653 456799999999999998 999999988432
Q ss_pred cccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 391 SLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 391 ~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
.||.+|+|+|+..++..+.+
T Consensus 320 -----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 -----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp -----SSGGGHHHHHHHHHHHHHHH
T ss_pred -----CCcHHHHHHHHHHHHHHHHh
Confidence 79999999999999987654
No 28
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.51 E-value=8e-15 Score=156.22 Aligned_cols=214 Identities=18% Similarity=0.195 Sum_probs=89.5
Q ss_pred ceEEEEeCCCCCHHHHHHHHHHH-HHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceE
Q psy3270 172 SEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLF 250 (655)
Q Consensus 172 ~~~vitVPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~ 250 (655)
..+++|+|+.++..+|+++.+++ +.+|++.+.+++||.||+++++. .+.+|+|+|+|||+++.+. +| ..
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v~pv~--~G-~~ 174 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHICPVY--EG-FS 174 (394)
T ss_dssp --------------------------------------------------------CCEEEECSSCEEEECEE--TT-EE
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEeeeeE--CC-EE
Confidence 45999999999999999999865 78899999999999999999875 3469999999999998774 34 21
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCC----------------CceE
Q psy3270 251 QVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSS----------------TEAS 314 (655)
Q Consensus 251 ~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~----------------~~~~ 314 (655)
+........+||+++|+.|.+++..+ .+......+. ..+|.+|+.+..- ....
T Consensus 175 -~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~ 243 (394)
T 1k8k_B 175 -LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVES 243 (394)
T ss_dssp -CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEE
T ss_pred -cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceE
Confidence 11112235799999999999988653 1111111122 2355555554321 1122
Q ss_pred EEEccccCCcceEEeecHHHHH---HHhhHH-----HHhhhhHHHHHHHHcCCC--CCCcceEEEecCccchHHHHHHHH
Q psy3270 315 LEIDALHEGIDFYSKITRARFE---ELCMDL-----FRQTLAPVERALNDAKLD--KGSIHDVVLVGGSIRIPKIQKMLQ 384 (655)
Q Consensus 315 i~i~~~~~~~~~~~~itr~~~e---~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l~ 384 (655)
+.+ .++. .+.++++.|. .+++|. ...+.+.|.+.|..+... ....+.|+|+||+|++|++.++|+
T Consensus 244 ~~l---pdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~ 318 (394)
T 1k8k_B 244 YTL---PDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLE 318 (394)
T ss_dssp EEC---TTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHH
T ss_pred EEC---CCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHH
Confidence 222 2333 4567777773 334442 234677888888877432 334578999999999999999999
Q ss_pred hhhCC-------------C---ccc--CCCCchhHHHhHHHHHHH
Q psy3270 385 DFFNG-------------K---SLN--LSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 385 ~~f~~-------------~---~v~--~~~~p~~ava~GAa~~a~ 411 (655)
+.+.. . ++. .+.+|..++.+|++++|.
T Consensus 319 ~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 319 RELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 88732 0 222 255778999999999886
No 29
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.50 E-value=1.1e-13 Score=119.54 Aligned_cols=92 Identities=53% Similarity=0.891 Sum_probs=75.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHhccCCccCHHHHHHHHHHHHHHHHHHHHHH
Q psy3270 564 KQRERVAAKNKLESYAFAVKQAAED--SGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTLQQTCTPIMTKL 641 (655)
Q Consensus 564 ~~~~~~~akN~LEs~iy~~r~~l~~--~~~~~~~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~ 641 (655)
+++++.++||.||+|||.+++.|.+ ...+++++++.++.+.|+++.+||+++.+++.++|+.++++|++.+.||..|+
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~ 82 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGL 82 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999976 33789999999999999999999999877899999999999999999999999
Q ss_pred Hhc-C----------------CCCCCCCCCC
Q psy3270 642 HQA-G----------------GKGPDVEEVD 655 (655)
Q Consensus 642 ~e~-~----------------~~~~~~~~~~ 655 (655)
+++ | +.||++||||
T Consensus 83 y~~~~~~~~~~~~~~~~~~~~~~gp~~eevd 113 (113)
T 3lof_A 83 YQGAGGPGPGGFGAQGPKGGSGSGPTIEEVD 113 (113)
T ss_dssp HHC----------------------------
T ss_pred HHhccCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 975 1 1468999998
No 30
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.47 E-value=8.7e-14 Score=146.31 Aligned_cols=192 Identities=20% Similarity=0.183 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHc-CC--cceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCC
Q psy3270 184 DSQRQATKDAGSIA-GL--NVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTH 260 (655)
Q Consensus 184 ~~~r~~~~~a~~~A-Gl--~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~ 260 (655)
..+-+.+.+|.+.+ |+ ++-. .||.||++++....+ .+..++++||||||||++++.- +....... ..
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE--~eLGvaiIDmGGGTTd~sVf~~--G~lv~a~~----ip 436 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG--TTRPLAILDLGAGSTDASIINP--KGDIIATH----LA 436 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECT--TCCEEEEE----EE
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcC--CcEEEEEE----ec
Confidence 34578899999999 99 7777 999999999988766 7889999999999999999863 32222222 45
Q ss_pred CCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCC----------CCceEEEE--ccccCCcceEE
Q psy3270 261 LGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSS----------STEASLEI--DALHEGIDFYS 328 (655)
Q Consensus 261 lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~----------~~~~~i~i--~~~~~~~~~~~ 328 (655)
.||++++..|..-|.- + =+..||++|+ +.. .+...+.+ +.+.. .
T Consensus 437 ~gG~~VT~DIA~~Lgt--------~----------d~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp-----~ 492 (610)
T 2d0o_A 437 GAGDMVTMIIARELGL--------E----------DRYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPP-----A 492 (610)
T ss_dssp CSHHHHHHHHHHHHTC--------C----------CHHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCG-----G
T ss_pred cchHHHHHHHHHHhCC--------C----------CHHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCc-----c
Confidence 8999999999765521 1 0235999999 642 12223444 22210 1
Q ss_pred eecH------HHHHHHhhHH--HHhhhhHHHHH----------HHHcCC-----CCCCcceEEEecCccchHHHHHHHHh
Q psy3270 329 KITR------ARFEELCMDL--FRQTLAPVERA----------LNDAKL-----DKGSIHDVVLVGGSIRIPKIQKMLQD 385 (655)
Q Consensus 329 ~itr------~~~e~~~~~~--~~~i~~~i~~~----------l~~~~~-----~~~~i~~ViLvGG~s~~p~v~~~l~~ 385 (655)
.++| +++..+ +|. +++ ++.+++. |+..+. +..+|..|+|+||+|.++.+.++.++
T Consensus 493 ~~~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~ 570 (610)
T 2d0o_A 493 VFARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTD 570 (610)
T ss_dssp GTTCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHH
T ss_pred eeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHH
Confidence 2333 444444 444 444 4444444 665443 23456899999999999999999999
Q ss_pred hhCCCccc-------CCCCchhHHHhHHHHHHH
Q psy3270 386 FFNGKSLN-------LSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 386 ~f~~~~v~-------~~~~p~~ava~GAa~~a~ 411 (655)
.|+.-+++ ..-.|.+|+|.|.+++.+
T Consensus 571 iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 571 ALAHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp HTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred HhCcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 99541332 234899999999998764
No 31
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.46 E-value=9.8e-14 Score=146.53 Aligned_cols=190 Identities=20% Similarity=0.186 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHc-CC--cceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCCCC
Q psy3270 186 QRQATKDAGSIA-GL--NVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLG 262 (655)
Q Consensus 186 ~r~~~~~a~~~A-Gl--~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lG 262 (655)
+-+.+.+|.+.+ |+ ++-. .||.||++++....+ .+..++++||||||||++++.-.. ...... ...|
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE--~elGvaiIDmGgGTTd~sVf~~g~--lv~a~~----ip~g 440 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG--CAAPLAILDLGAGSTDAAIVNAEG--QITAVH----LAGA 440 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECSSS--CEEEEE----EECC
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCCc--EEEEEE----eccc
Confidence 456788999999 99 6666 999999999988766 788999999999999999996433 222222 3589
Q ss_pred cchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCC----------CCceEEEE--ccccCCcceEEee
Q psy3270 263 GEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSS----------STEASLEI--DALHEGIDFYSKI 330 (655)
Q Consensus 263 G~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~----------~~~~~i~i--~~~~~~~~~~~~i 330 (655)
|++++..|..-|.-. | +..||++|+ +.. .+...+.+ +.+.. ..+
T Consensus 441 G~~VT~DIA~~Lg~~-------d-----------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp-----~~~ 496 (607)
T 1nbw_A 441 GNMVSLLIKTELGLE-------D-----------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSP-----AVF 496 (607)
T ss_dssp HHHHHHHHHHHHTCS-------C-----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCG-----GGT
T ss_pred hHHHHHHHHHHhCCC-------C-----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCc-----cee
Confidence 999999997655211 0 235999999 642 12223444 22210 022
Q ss_pred cH------HHHHHHhhHH--HHhhhhHHHHH----------HHHcCCCC-----CCcceEEEecCccchHHHHHHHHhhh
Q psy3270 331 TR------ARFEELCMDL--FRQTLAPVERA----------LNDAKLDK-----GSIHDVVLVGGSIRIPKIQKMLQDFF 387 (655)
Q Consensus 331 tr------~~~e~~~~~~--~~~i~~~i~~~----------l~~~~~~~-----~~i~~ViLvGG~s~~p~v~~~l~~~f 387 (655)
+| +++..+ +|. +++ ++.+++. |+..+... .+|..|+|+||+|.++.+.++.++.|
T Consensus 497 ~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL 574 (607)
T 1nbw_A 497 AKVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEAL 574 (607)
T ss_dssp TCEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHH
T ss_pred eeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHh
Confidence 33 444333 444 444 4444444 77766533 35689999999999999999999999
Q ss_pred CCCccc-------CCCCchhHHHhHHHHHHH
Q psy3270 388 NGKSLN-------LSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 388 ~~~~v~-------~~~~p~~ava~GAa~~a~ 411 (655)
+.-+++ ..-.|.+|+|.|.+++.+
T Consensus 575 ~~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 575 SHYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp HTTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred CcCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 431332 234899999999998653
No 32
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.39 E-value=2.9e-13 Score=140.32 Aligned_cols=205 Identities=13% Similarity=0.164 Sum_probs=139.0
Q ss_pred ceEEEEeCCCCCHH--HHHHHHHHHHHc--------C------CcceeecChHHHHHHHcccccccCCCceEEEEEeCCc
Q psy3270 172 SEAVITVPAYFNDS--QRQATKDAGSIA--------G------LNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGG 235 (655)
Q Consensus 172 ~~~vitVPa~~~~~--~r~~~~~a~~~A--------G------l~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~Ggg 235 (655)
..++++.|..+... +|+.+++....- | +..+.+++||.+|.+.+. . ...+..++|+|+|||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~-~--~~~~~~v~vvDiGgg 182 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ-E--NFKNKNVAVIDFGGL 182 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC-C--CCTTCEEEEEEECSS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc-h--hhccCCEEEEEeCCC
Confidence 46889999987743 677777766521 2 134778999998887753 1 125788999999999
Q ss_pred eeEEEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEE
Q psy3270 236 TFDVSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASL 315 (655)
Q Consensus 236 T~dvsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i 315 (655)
|||++++. .+ .+ +....+...+||.++++.|.+++.+ .+++..+... .+|++|+. . ...
T Consensus 183 Ttd~~v~~--~g-~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~~---------~~e~i~~~-g---~~~- 241 (329)
T 4apw_A 183 NMGFSLYR--NC-VV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITNE---------QAESALNN-G---YMK- 241 (329)
T ss_dssp CEEEEEEE--TT-EE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTSB---------TTTTCSSS-C---SSC-
T ss_pred cEEEEEEE--CC-EE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCHH---------HHHHHHhc-C---Ccc-
Confidence 99999997 34 32 2223344679999999999887754 0333332211 24444432 1 010
Q ss_pred EEccccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCC
Q psy3270 316 EIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLS 395 (655)
Q Consensus 316 ~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~ 395 (655)
.+.+. ..++.+++++.+++.++++.+.+++. +.+++.++.|+|+||++.+ +.+.+++.|+ .++...
T Consensus 242 ------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v~ 307 (329)
T 4apw_A 242 ------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYP-NNSIIT 307 (329)
T ss_dssp ------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHST-TCEECC
T ss_pred ------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcC-CCCEec
Confidence 01111 13456777777777777777776665 3455568999999999998 5699999994 456778
Q ss_pred CCchhHHHhHHHHHHHHHc
Q psy3270 396 INPDEAVAYGAAVQAAILS 414 (655)
Q Consensus 396 ~~p~~ava~GAa~~a~~l~ 414 (655)
.||.+|+|+|+..++....
T Consensus 308 ~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 308 NNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp SSGGGHHHHHHHHHHHHHH
T ss_pred CCChhhHHHHHHHHHhhhh
Confidence 8999999999999886554
No 33
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.26 E-value=4.3e-12 Score=110.63 Aligned_cols=91 Identities=43% Similarity=0.657 Sum_probs=71.9
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHhccCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q psy3270 565 QRERVAAKNKLESYAFAVKQAAED--SGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTLQQTCTPIMTKLH 642 (655)
Q Consensus 565 ~~~~~~akN~LEs~iy~~r~~l~~--~~~~~~~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~ 642 (655)
+|++.++||+||+|||.+++.|.+ ....++++++++|.+.++++.+||+++.+++.++|+.++++|++++.||..|++
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y 92 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLY 92 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999976 336799999999999999999999876668999999999999999999999987
Q ss_pred hc-----C----------CCCCCCCCCC
Q psy3270 643 QA-----G----------GKGPDVEEVD 655 (655)
Q Consensus 643 e~-----~----------~~~~~~~~~~ 655 (655)
++ | |.+|++||||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~ee~d 120 (120)
T 2p32_A 93 QSAGGAPPGAAPGGAAGGAGGPTIEEVD 120 (120)
T ss_dssp CC--------------------------
T ss_pred HhccCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 53 1 1367899987
No 34
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.17 E-value=2.4e-11 Score=104.98 Aligned_cols=77 Identities=43% Similarity=0.729 Sum_probs=67.6
Q ss_pred HHHHHhhHHHHHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHhccCCccCHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy3270 568 RVAAKNKLESYAFAVKQAAED--SGSKLSDADKTSVSQACSATLTWLEGNSLAEKEEFEDRLKTLQQTCTPIMTKLHQA 644 (655)
Q Consensus 568 ~~~akN~LEs~iy~~r~~l~~--~~~~~~~~e~~~l~~~l~e~~~WL~~~~~a~~~~~~~kl~~L~~~~~~i~~r~~e~ 644 (655)
+.++||+||+|||.+++.|.+ ...+++++++++|.+.++++.+||+++.+++.++|+.++++|++++.||..|+++.
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~ 80 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQS 80 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999973 33789999999999999999999986555788999999999999999999998853
No 35
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.15 E-value=5.5e-11 Score=127.10 Aligned_cols=224 Identities=19% Similarity=0.157 Sum_probs=142.2
Q ss_pred cceEEEEeCCCCCHHHHHHHHHHH-HHcCCcceeecChHHHHHHHcccccccC-CCceEEEEEeCCceeEEEEEEEeCCc
Q psy3270 171 VSEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLK-GEKNVLIFDLGGGTFDVSVLAIDEGS 248 (655)
Q Consensus 171 ~~~~vitVPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~Aaal~~~~~~~~~-~~~~vlV~D~GggT~dvsv~~~~~~~ 248 (655)
-..+++|.|.......|+.+.+.+ +..|++.+.++.+|.+|+++.+...... ...+-+|+|+|+|+|+++.+. +|.
T Consensus 123 ~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~--~G~ 200 (427)
T 3dwl_A 123 DHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA--EGY 200 (427)
T ss_dssp GCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE--TTE
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE--CCE
Confidence 357999999999999999999987 7899999999999999999887542211 135679999999999999984 341
Q ss_pred eEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCc-----------eEEEE
Q psy3270 249 LFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTE-----------ASLEI 317 (655)
Q Consensus 249 ~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~-----------~~i~i 317 (655)
.+. .......+||+++|+.|.+++..+... .. -...++.+|+.+..-.. ....+
T Consensus 201 ~l~--~~~~rl~~gG~~lt~~L~~lL~~~~~~------~~-------~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~ 265 (427)
T 3dwl_A 201 VIG--SSIKTMPLAGRDVTYFVQSLLRDRNEP------DS-------SLKTAERIKEECCYVCPDIVKEFSRFDREPDRY 265 (427)
T ss_dssp ECG--GGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----
T ss_pred Eeh--hhheeccccHHHHHHHHHHHHHHcCCC------ch-------hHHHHHHHHHhcCcccCCHHHHHHHhhcCcccc
Confidence 111 111124699999999998887543321 00 11235556665532110 00000
Q ss_pred c--cc--cCCcceEEeecHHHHH---HHhhHH------HHhhhhHHHHHHHHcCCC--CCCcceEEEecCccchHHHHHH
Q psy3270 318 D--AL--HEGIDFYSKITRARFE---ELCMDL------FRQTLAPVERALNDAKLD--KGSIHDVVLVGGSIRIPKIQKM 382 (655)
Q Consensus 318 ~--~~--~~~~~~~~~itr~~~e---~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~ 382 (655)
. .+ .+|....+++..+.|. -++.|- ...+.+.|.+.|.++..+ +.-...|+|+||+|.+|++.++
T Consensus 266 ~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~R 345 (427)
T 3dwl_A 266 LKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNR 345 (427)
T ss_dssp CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHH
T ss_pred ceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHH
Confidence 0 01 2343345677777663 344542 234677777888765422 2224669999999999999999
Q ss_pred HHhhhC-------------------C--CcccCCCCchhHHHhHHHHHHH
Q psy3270 383 LQDFFN-------------------G--KSLNLSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 383 l~~~f~-------------------~--~~v~~~~~p~~ava~GAa~~a~ 411 (655)
|++.+. . .++..+.++..++=+|++++|.
T Consensus 346 L~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 346 LQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 987651 1 1223345667899999999985
No 36
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=98.89 E-value=5.1e-09 Score=113.06 Aligned_cols=93 Identities=17% Similarity=0.282 Sum_probs=74.7
Q ss_pred eEEEEeCCCCCHHHHHHHHHHH-HHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceEE
Q psy3270 173 EAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQ 251 (655)
Q Consensus 173 ~~vitVPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~ 251 (655)
.+++|.|.......|+.+.+.+ +..|++.+.++.+|.||+++++.. +-+|+|+|+|+|+++.+. .|..+
T Consensus 116 pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~-------tglVVDiG~g~T~vvPI~--~G~~l- 185 (498)
T 3qb0_A 116 PALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP-------NCLVVDIGHDTCSVSPIV--DGMTL- 185 (498)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-------SEEEEEECSSCEEEEEEE--TTEEC-
T ss_pred ceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC-------eEEEEEcCCCcEEEEEEe--CCEEc-
Confidence 6999999998899999999975 789999999999999999988752 249999999999999985 34111
Q ss_pred EEEecCCCCCCcchHHHHHHHHHHH
Q psy3270 252 VKSTAGDTHLGGEDFDNRLVTFFAD 276 (655)
Q Consensus 252 v~~~~~~~~lGG~~~d~~l~~~~~~ 276 (655)
........+||+++|+.|.+++.+
T Consensus 186 -~~ai~rl~vgG~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 186 -SKSTRRNFIAGKFINHLIKKALEP 209 (498)
T ss_dssp -GGGCEEESCSHHHHHHHHHHHTTT
T ss_pred -cccceeccccHHHHHHHHHHHHHh
Confidence 111112469999999999998853
No 37
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.52 E-value=5.4e-07 Score=101.12 Aligned_cols=101 Identities=18% Similarity=0.285 Sum_probs=77.2
Q ss_pred HHhcCCcc-----eEEEEeCCCCCHHHHHHHHHHH-HHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeE
Q psy3270 165 VYLGGKVS-----EAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFD 238 (655)
Q Consensus 165 ~~~~~~~~-----~~vitVPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~d 238 (655)
..|+.... .+++|.|..++...|+.|.+.+ +.-|+..+.++.++.+|++++|.. +-+|+|+|.++|+
T Consensus 187 ~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-------tglVVDiG~~~T~ 259 (593)
T 4fo0_A 187 KYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-------STCIVDVGDQKTS 259 (593)
T ss_dssp HTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS-------EEEEEEECSSCEE
T ss_pred HhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC-------ceEEEEeCCCcee
Confidence 45665443 4999999999999999988764 677999999999999999998753 4599999999999
Q ss_pred EEEEEEeCCceEEEEEecCCCCCCcchHHHHHHHHHHH
Q psy3270 239 VSVLAIDEGSLFQVKSTAGDTHLGGEDFDNRLVTFFAD 276 (655)
Q Consensus 239 vsv~~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~ 276 (655)
++-+. +|..+ ....-...+||.++++.|.++|..
T Consensus 260 v~PV~--dG~~l--~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 260 VCCVE--DGVSH--RNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp EEEEE--SSCBC--GGGCEEESCCHHHHHHHHHHHHHH
T ss_pred eeeeE--CCEEe--hhheEEecccHHHHHHHHHHHHHh
Confidence 88765 33111 111112469999999999888754
No 38
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.42 E-value=1.7e-07 Score=104.89 Aligned_cols=86 Identities=56% Similarity=0.867 Sum_probs=66.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEE
Q psy3270 69 ISSMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIF 148 (655)
Q Consensus 69 v~a~~l~~l~~~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~ 148 (655)
++..+.+.+..........-+-. ||++|++.||+++.+|+++|||+++++++||+|||++|+++.. ..+..++++
T Consensus 119 iL~~lk~~ae~~lg~~v~~~VIT----VPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~-~~~~~vlV~ 193 (605)
T 4b9q_A 119 VLKKMKKTAEDYLGEPVTEAVIT----VPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVY 193 (605)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEE----ECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSC-CSSEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCeEEEE----ECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhcc-CCCCEEEEE
Confidence 34444444444443333332333 5999999999999999999999999999999999999998754 356789999
Q ss_pred eccccchhhHH
Q psy3270 149 DLGGGTFDVSM 159 (655)
Q Consensus 149 d~g~~~~~~~l 159 (655)
|+|||+++.++
T Consensus 194 DlGGGT~Dvsi 204 (605)
T 4b9q_A 194 DLGGGAFDISI 204 (605)
T ss_dssp EECSSCEEEEE
T ss_pred ECCCCeEEEEE
Confidence 99999999754
No 39
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=98.41 E-value=2e-07 Score=103.40 Aligned_cols=64 Identities=88% Similarity=1.304 Sum_probs=58.9
Q ss_pred cCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 96 VPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 96 vP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
||++|++.||+++.+|++.|||+++++++||+|||++|+++.....+...+++|+||++++.++
T Consensus 146 VPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv 209 (554)
T 1yuw_A 146 VPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSI 209 (554)
T ss_dssp ECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEE
Confidence 5999999999999999999999999999999999999998765556789999999999999754
No 40
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=98.38 E-value=2.2e-07 Score=104.05 Aligned_cols=64 Identities=75% Similarity=1.187 Sum_probs=57.8
Q ss_pred cCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHHH
Q psy3270 96 VPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSMR 160 (655)
Q Consensus 96 vP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l~ 160 (655)
||+||++.||+++.+|++.|||+++++++||+|||++|+++.. ..+..++++|+|||+++.++.
T Consensus 142 VPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~-~~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 2kho_A 142 VPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISII 205 (605)
T ss_dssp ECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSS-SSEEEEEEEEECSSCEEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhccc-CCCCEEEEEECCCCeEEEEEE
Confidence 5999999999999999999999999999999999999998653 256789999999999997543
No 41
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.38 E-value=2.4e-07 Score=104.64 Aligned_cols=64 Identities=39% Similarity=0.684 Sum_probs=57.8
Q ss_pred cCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccc-c----CCCeeEEEEeccccchhhHH
Q psy3270 96 VPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKN-L----KGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 96 vP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~-~----~~~~~~~~~d~g~~~~~~~l 159 (655)
||++|++.||+++.+|+++|||+++++++||+|||+.|+++.. + ..+...+++|+|||+++.++
T Consensus 145 VPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv 213 (675)
T 3d2f_A 145 VPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSI 213 (675)
T ss_dssp ECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEE
Confidence 7999999999999999999999999999999999999998653 2 34678999999999999754
No 42
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=98.25 E-value=8.4e-07 Score=97.38 Aligned_cols=62 Identities=79% Similarity=1.230 Sum_probs=57.1
Q ss_pred cCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 96 VPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 96 vP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
||++|++.||+++.+|++.|||+++++++||+|||+.|+++.. .+...+++|+|+++++.++
T Consensus 116 vPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~--~~~~vlV~D~GgGT~Dvsv 177 (509)
T 2v7y_A 116 VPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE--EDQTILVYDLGGGTFDVSI 177 (509)
T ss_dssp ECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS--CSEEEEEEEECSSCEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC--CCCEEEEEECCCCeEEEEE
Confidence 5999999999999999999999999999999999999998753 6788999999999999754
No 43
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=98.24 E-value=9.3e-07 Score=94.21 Aligned_cols=64 Identities=89% Similarity=1.288 Sum_probs=58.2
Q ss_pred cCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccC--CCeeEEEEeccccchhhHH
Q psy3270 96 VPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLK--GEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 96 vP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~--~~~~~~~~d~g~~~~~~~l 159 (655)
||++|++.||+++.+|++.|||+++.+++||+|||++|+...... .+..++++|+||++++..+
T Consensus 165 vPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv 230 (404)
T 3i33_A 165 VPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSI 230 (404)
T ss_dssp ECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEE
Confidence 599999999999999999999999999999999999999876544 6788999999999999743
No 44
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.22 E-value=9.5e-07 Score=94.31 Aligned_cols=88 Identities=30% Similarity=0.427 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhcccc-ccCCCeeEE
Q psy3270 68 EISSMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDK-NLKGEKNVL 146 (655)
Q Consensus 68 ev~a~~l~~l~~~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~-~~~~~~~~~ 146 (655)
.++..+...+..........-+-. ||++|++.||+++.+|++.|||+++++++||+|||++|+... ....+..++
T Consensus 133 ~~L~~l~~~a~~~~~~~~~~~vit----vPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vl 208 (409)
T 4gni_A 133 RYLRRLVGAASEYLGKKVTSAVIT----IPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIV 208 (409)
T ss_dssp HHHHHHHHHHHHHHTSCCCEEEEE----ECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEE----ECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEE
Confidence 455666666666554444333333 599999999999999999999999999999999999998865 446678999
Q ss_pred EEeccccchhhHH
Q psy3270 147 IFDLGGGTFDVSM 159 (655)
Q Consensus 147 ~~d~g~~~~~~~l 159 (655)
++|+||++++.++
T Consensus 209 v~D~GgGT~dvsv 221 (409)
T 4gni_A 209 VADLGGSRSDVTV 221 (409)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEECCCCceEEEE
Confidence 9999999999743
No 45
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.22 E-value=1.4e-05 Score=79.98 Aligned_cols=74 Identities=22% Similarity=0.236 Sum_probs=55.5
Q ss_pred HHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHc
Q psy3270 336 EELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILS 414 (655)
Q Consensus 336 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~ 414 (655)
++++..+++.+...+.+.++..+. .+.|+++||.++.|.+++.+.+.+ +.++..+.+|+.+.|+|||++|....
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~~ 258 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKKA 258 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHhh
Confidence 344445555555555555543321 367999999999999999999999 67788887888899999999997643
No 46
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=98.05 E-value=3.9e-06 Score=89.02 Aligned_cols=85 Identities=60% Similarity=0.910 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEE
Q psy3270 69 ISSMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIF 148 (655)
Q Consensus 69 v~a~~l~~l~~~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~ 148 (655)
++..+...+..........-+-. ||++|++.||+++.+|++.|||+++.+++||+|||+.|++... ..+...+++
T Consensus 137 ~l~~l~~~a~~~~~~~~~~~vit----vP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~vlV~ 211 (394)
T 3qfu_A 137 ILGKMKQIAEDYLGTKVTHAVVT----VPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKS-DKEHQIIVY 211 (394)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEE----ECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSC-SSCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcceEEEE----ECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccC-CCCceEEEE
Confidence 44555555555444333322333 5999999999999999999999999999999999999987653 356788999
Q ss_pred eccccchhhH
Q psy3270 149 DLGGGTFDVS 158 (655)
Q Consensus 149 d~g~~~~~~~ 158 (655)
|+|+++++..
T Consensus 212 D~Gggt~dvs 221 (394)
T 3qfu_A 212 DLGGGTFDVS 221 (394)
T ss_dssp EECSSCEEEE
T ss_pred EcCCCceeEE
Confidence 9999999864
No 47
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=97.98 E-value=4.5e-06 Score=88.20 Aligned_cols=63 Identities=76% Similarity=1.219 Sum_probs=56.3
Q ss_pred cCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 96 VPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 96 vP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
||++|++.||+++.+|++.||++++.+++||+||++.|++... ..+...+++|+|+++++..+
T Consensus 142 vP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lVvD~Gggttdvsv 204 (383)
T 1dkg_D 142 VPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISI 204 (383)
T ss_dssp BCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC--CCEEEEEEEEECSSCEEEEE
T ss_pred ECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccC-CCCcEEEEEEcCCCeEEEEE
Confidence 5999999999999999999999999999999999999988643 35678999999999999743
No 48
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=97.90 E-value=9.6e-06 Score=84.29 Aligned_cols=89 Identities=30% Similarity=0.411 Sum_probs=73.7
Q ss_pred ChhhhHHHHHHHHHHHHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCee
Q psy3270 65 APEEISSMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKN 144 (655)
Q Consensus 65 ~~~ev~a~~l~~l~~~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~ 144 (655)
.++++.+++|++++.. .+++ ...+|||+|++|++.||+++.+|++.||++++.+++||+||++.|+.+. ..+..
T Consensus 75 ~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~--~~~~~ 148 (344)
T 1jce_A 75 VALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNV--EEPSG 148 (344)
T ss_dssp HHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCT--TSSSC
T ss_pred HHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCC--CCCce
Confidence 4667777777666542 1233 4789999999999999999999999999999999999999999998754 35678
Q ss_pred EEEEeccccchhhHH
Q psy3270 145 VLIFDLGGGTFDVSM 159 (655)
Q Consensus 145 ~~~~d~g~~~~~~~l 159 (655)
.+++|+|+++++..+
T Consensus 149 ~lVvDiGggttdvsv 163 (344)
T 1jce_A 149 NMVVDIGGGTTEVAV 163 (344)
T ss_dssp EEEEEECSSCEEEEE
T ss_pred EEEEEeCCCeEEEEE
Confidence 899999999999743
No 49
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=97.88 E-value=4.8e-06 Score=86.57 Aligned_cols=96 Identities=22% Similarity=0.217 Sum_probs=71.8
Q ss_pred EeChhhhHHHHHHHHHHHHHHHhCCCCceEE--EecCCCCCHHHHHHHHHhhhhc--------C------Cceeeeccch
Q psy3270 63 KFAPEEISSMVLTKMREIAEVYLGGKVSEAV--ITVPAYFNDSQRQATKDAGSIA--------G------LNVLRIINEP 126 (655)
Q Consensus 63 ~~~~~ev~a~~l~~l~~~ae~~~~~~i~~~v--itvP~~f~~~~r~~~~~a~~~a--------g------l~~~~~i~e~ 126 (655)
.+++++..++++..++..++...+.+ .++| |+||++|+..||+++.+++.-+ | +..+++++||
T Consensus 94 ~~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep 172 (346)
T 2fsj_A 94 RLASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQG 172 (346)
T ss_dssp CTTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETT
T ss_pred cccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccH
Confidence 56778888888888877653333334 5699 9999999999999999997765 4 3568899999
Q ss_pred hHHHHhhccccc-cC-CCeeEEEEeccccchhhHHH
Q psy3270 127 TAAALAYGLDKN-LK-GEKNVLIFDLGGGTFDVSMR 160 (655)
Q Consensus 127 ~Aaa~~~~~~~~-~~-~~~~~~~~d~g~~~~~~~l~ 160 (655)
+||++.| ++.. .. .+...+++|+|+++++..+.
T Consensus 173 ~AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi 207 (346)
T 2fsj_A 173 VGAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTI 207 (346)
T ss_dssp HHHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEE
T ss_pred HHHHHHh-hccccccccCCcEEEEECCCCcEEEEEE
Confidence 9999988 3221 22 23567999999999997543
No 50
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.82 E-value=3e-05 Score=77.64 Aligned_cols=83 Identities=25% Similarity=0.434 Sum_probs=74.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEE
Q psy3270 68 EISSMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLI 147 (655)
Q Consensus 68 ev~a~~l~~l~~~ae~~~~~~i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~ 147 (655)
+.+..+|+++++.++.+.+.++..+++++|.+|+..+|+.+.++++.+|+++..++.+|.|+++.++.. ..++
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-------~~~v 143 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-------DGIV 143 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-------SEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-------CEEE
Confidence 678999999999999999999999999999999999999999999999999999999999999998764 2599
Q ss_pred Eeccccchhh
Q psy3270 148 FDLGGGTFDV 157 (655)
Q Consensus 148 ~d~g~~~~~~ 157 (655)
+|+|+++++.
T Consensus 144 iDiGggst~~ 153 (272)
T 3h1q_A 144 VDIGGGTTGI 153 (272)
T ss_dssp EEECSSCEEE
T ss_pred EEECCCcEEE
Confidence 9999999885
No 51
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.64 E-value=7.4e-05 Score=81.69 Aligned_cols=124 Identities=17% Similarity=0.266 Sum_probs=87.4
Q ss_pred ceEEEEeCCCCCHHHHHHHHHHH-HHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceE
Q psy3270 172 SEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLF 250 (655)
Q Consensus 172 ~~~vitVPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~ 250 (655)
..+++|.|..+....|+.|.+.+ +..|++.+.++.+|.||+++++. ..+-+|+|+|+|+|+++.+. .| .
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~VvPV~--eG-~- 291 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRIACVD--EG-T- 291 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEEEEEE--TT-E-
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEEEEEe--CC-E-
Confidence 47999999999999999999987 56899999999999999998864 23569999999999999874 34 1
Q ss_pred EEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCC
Q psy3270 251 QVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSS 310 (655)
Q Consensus 251 ~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~ 310 (655)
.+........+||+++|+.|.+++...--......+.. . .=+..++.+|+.+..-
T Consensus 292 vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t--~---~e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 292 VLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDS--K---HGWLLAERLKKNFTTF 346 (655)
T ss_dssp ECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTS--H---HHHHHHHHHHHHHCCC
T ss_pred EEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCC--c---chHHHHHHHHHheEEE
Confidence 11111112569999999999988865310000011111 1 1123477888887654
No 52
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=97.49 E-value=4.3e-05 Score=80.35 Aligned_cols=136 Identities=16% Similarity=0.142 Sum_probs=92.0
Q ss_pred HhhhcCcCcchhhhhhhcCCCCCChhhHhhhccCCeEEeecCCcceEEEEEcCceeEeChhhhHHHHHHHHHHHHHHHhC
Q psy3270 7 LSVAMNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISSMVLTKMREIAEVYLG 86 (655)
Q Consensus 7 ~~~~~~p~~~~~~~krliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ev~a~~l~~l~~~ae~~~~ 86 (655)
+....+|++++..+|+++++. . ...++ -.+.-.+...+...... ..++++++... ++..|+++++
T Consensus 52 ~g~i~d~~~~~~~ik~~~~~~--~----~~~~~---v~~~i~~~~~~~~~~~~--~~v~~~el~~~----i~~ea~~~~~ 116 (377)
T 2ych_A 52 EGMVAEPAALAQEIKELLLEA--R----TRKRY---VVTALSNLAVILRPIQV--PKMPLKEMEEA----VRWEAERYIP 116 (377)
T ss_dssp TTEESCHHHHHHHHHHHHHHH--T----CCCCE---EEEEECGGGCEEEEEEE--ECCCHHHHHHH----HHHHHGGGCS
T ss_pred CCCcCCHHHHHHHHHHHHHHc--C----CCcce---EEEEecCCcEEEEEEEC--CCCCHHHHHHH----HHHHHhhcCC
Confidence 445678889999999999861 0 00111 11122222222111111 34677776543 2457888999
Q ss_pred CCCceEEEecCCCCCHHH--------------------HHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEE
Q psy3270 87 GKVSEAVITVPAYFNDSQ--------------------RQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVL 146 (655)
Q Consensus 87 ~~i~~~vitvP~~f~~~~--------------------r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~ 146 (655)
.++.++|+.+|. .+.+ .+.+.++++.|||++..++.||.|++..|+.......+.+.+
T Consensus 117 ~~~~~~vid~~~--~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~ 194 (377)
T 2ych_A 117 FPIDEVVLDFAP--LTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFL 194 (377)
T ss_dssp SCC-CEEEEEEE--SSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEE
T ss_pred CChhHceEEEEE--eCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEE
Confidence 999999999973 2222 388999999999999999999999999997654334567889
Q ss_pred EEeccccchhhHH
Q psy3270 147 IFDLGGGTFDVSM 159 (655)
Q Consensus 147 ~~d~g~~~~~~~l 159 (655)
++|+|+++++..+
T Consensus 195 vvDiGggttdi~i 207 (377)
T 2ych_A 195 VLDIGAESTSLVL 207 (377)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEEECCCcEEEEE
Confidence 9999999999754
No 53
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.32 E-value=0.0032 Score=64.55 Aligned_cols=47 Identities=21% Similarity=0.054 Sum_probs=40.7
Q ss_pred cceEEEecC-ccchHHHHHHHHhhh-----CCCcccCCCCchhHHHhHHHHHH
Q psy3270 364 IHDVVLVGG-SIRIPKIQKMLQDFF-----NGKSLNLSINPDEAVAYGAAVQA 410 (655)
Q Consensus 364 i~~ViLvGG-~s~~p~v~~~l~~~f-----~~~~v~~~~~p~~ava~GAa~~a 410 (655)
++.|+++|| .+..|.+++.|++.+ ++.++..+.+|..+-|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 345999999 899999999999997 34677778899999999999975
No 54
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.24 E-value=0.0034 Score=62.58 Aligned_cols=76 Identities=14% Similarity=0.062 Sum_probs=53.1
Q ss_pred ecHHHHH-HHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecC-ccchHHHHHHHHhhh--CCCcccCCCCchhHHHhH
Q psy3270 330 ITRARFE-ELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGG-SIRIPKIQKMLQDFF--NGKSLNLSINPDEAVAYG 405 (655)
Q Consensus 330 itr~~~e-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~s~~p~v~~~l~~~f--~~~~v~~~~~p~~ava~G 405 (655)
.+++++. .++..+.+++..+...+.+..+ ++.|+++|| .+..|.+++.+++.+ .+.++..+.+|..+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 4555444 2333334444444333334443 446999999 899999999999984 467888889999999999
Q ss_pred HHHHH
Q psy3270 406 AAVQA 410 (655)
Q Consensus 406 Aa~~a 410 (655)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 55
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=96.85 E-value=0.0017 Score=68.11 Aligned_cols=79 Identities=10% Similarity=0.046 Sum_probs=62.4
Q ss_pred hHHHHHHHHHHHHHHHhCCC--CceEEEecCCCCCHHHHHHHHHhh-hhcCCceeeeccchhHHHHhhccccccCCCeeE
Q psy3270 69 ISSMVLTKMREIAEVYLGGK--VSEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKGEKNV 145 (655)
Q Consensus 69 v~a~~l~~l~~~ae~~~~~~--i~~~vitvP~~f~~~~r~~~~~a~-~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~ 145 (655)
....+++++.. +.++.. -..+++|+|++++..+|+++.+++ +.+|++.+.++++|+||++++|. ...
T Consensus 81 ~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~ 150 (375)
T 2fxu_A 81 DMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-------TTG 150 (375)
T ss_dssp HHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-------SSE
T ss_pred HHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC-------CeE
Confidence 44555555542 234432 346999999999999999988875 88999999999999999999986 367
Q ss_pred EEEeccccchhh
Q psy3270 146 LIFDLGGGTFDV 157 (655)
Q Consensus 146 ~~~d~g~~~~~~ 157 (655)
+++|+|+++++.
T Consensus 151 lVvDiG~gtt~v 162 (375)
T 2fxu_A 151 IVLDSGDGVTHN 162 (375)
T ss_dssp EEEEECSSCEEE
T ss_pred EEEEcCCCceEE
Confidence 999999988874
No 56
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=96.77 E-value=0.0027 Score=67.48 Aligned_cols=84 Identities=17% Similarity=0.118 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHhCC--CCceEEEecCCCCCHHHHHHHHHhh-hhcCCceeeeccchhHHHHh-hcc-ccccCCCee
Q psy3270 70 SSMVLTKMREIAEVYLGG--KVSEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALA-YGL-DKNLKGEKN 144 (655)
Q Consensus 70 ~a~~l~~l~~~ae~~~~~--~i~~~vitvP~~f~~~~r~~~~~a~-~~agl~~~~~i~e~~Aaa~~-~~~-~~~~~~~~~ 144 (655)
...+++++.. +.++. ....+|+|+|++|++.+|+++.+++ +.+|++.+.++++|+||++. |.. ....... .
T Consensus 89 ~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~-~ 164 (418)
T 1k8k_A 89 MERFMEQVIF---KYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTL-T 164 (418)
T ss_dssp HHHHHHHHHH---TTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCC-C
T ss_pred HHHHHHHHHH---hccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCC-e
Confidence 4445555542 23443 2457999999999999999999999 99999999999999999877 311 1111222 5
Q ss_pred EEEEeccccchhh
Q psy3270 145 VLIFDLGGGTFDV 157 (655)
Q Consensus 145 ~~~~d~g~~~~~~ 157 (655)
.+++|+|+++++.
T Consensus 165 glVvDiG~gtt~v 177 (418)
T 1k8k_A 165 GTVIDSGDGVTHV 177 (418)
T ss_dssp EEEEEESSSCEEE
T ss_pred EEEEEcCCCceEE
Confidence 6999999999885
No 57
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.37 E-value=0.0065 Score=67.03 Aligned_cols=85 Identities=14% Similarity=0.205 Sum_probs=63.4
Q ss_pred eecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHH
Q psy3270 329 KITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAV 408 (655)
Q Consensus 329 ~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~ 408 (655)
.-+|.++..+++.+++.+.-.++..++...-....++.|.++||.++.+.+.+.+.+.| +.++..+ ...++.|+|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHH
Confidence 44788876556666666665555554433222335788999999999999999999999 6777665 456799999999
Q ss_pred HHHHHcC
Q psy3270 409 QAAILSG 415 (655)
Q Consensus 409 ~a~~l~~ 415 (655)
.|+.-.+
T Consensus 486 lA~~a~G 492 (554)
T 3l0q_A 486 MGTVAAG 492 (554)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9987665
No 58
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.21 E-value=0.0097 Score=65.39 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=61.2
Q ss_pred HHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 336 EELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 336 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
..+++.+++.+.-.++..++..+.....++.|.++||+++.+.+.+++.+.| +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 5566666777766666777766544456788999999999999999999999 6777654 5678999999999976544
No 59
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.14 E-value=0.0076 Score=65.36 Aligned_cols=78 Identities=24% Similarity=0.273 Sum_probs=55.3
Q ss_pred HHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 337 ELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 337 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
++++.+++.+.-.++..++........++.|.++||.++.+.+.+.+.+.| +.++..+..++.+.|+|||+.|+.-.+
T Consensus 360 ~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 360 ELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 344555555544444444433222234678999999999999999999999 788877655555699999999987655
No 60
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.01 E-value=0.012 Score=64.16 Aligned_cols=77 Identities=10% Similarity=0.130 Sum_probs=55.2
Q ss_pred HHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 337 ELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 337 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
.+++.+++.+.-.+...++...-....++.|.++||+++.+.+.+.+.+.| +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 367 ~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 443 (504)
T 3ll3_A 367 EMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLARQALG 443 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHHHHHcC
Confidence 334555555544444444332211235789999999999999999999999 6777664 5667999999999987665
No 61
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.99 E-value=0.013 Score=63.63 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=57.1
Q ss_pred HHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 337 ELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 337 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
++++.+++.+.-.+...++...... .++.|.++||.++.+.+.+.+.+.| +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 368 ~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 368 HLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHHHHHhC
Confidence 3455556666555666665543333 5788999999999999999999999 6777655 4556999999999987655
No 62
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.98 E-value=0.0089 Score=65.22 Aligned_cols=77 Identities=27% Similarity=0.373 Sum_probs=55.0
Q ss_pred cHHHHHHHhhHHHHhhhhHHHH---HHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHH
Q psy3270 331 TRARFEELCMDLFRQTLAPVER---ALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAA 407 (655)
Q Consensus 331 tr~~~e~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa 407 (655)
+|.+ +++.+++.+.-.+.. .|++.+. .++.|.++||.++.+.+.+++.+.| +.++..+ .+.++.|+|||
T Consensus 395 ~~~~---l~RAvlEgia~~~r~~l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA 466 (515)
T 3i8b_A 395 TREN---LARAFVEGLLCSQRDCLELIRSLGA---SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAA 466 (515)
T ss_dssp SHHH---HHHHHHHHHHHHHHHHHHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHH
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHH
Confidence 4544 344455544433333 3444443 4688999999999999999999999 6777664 56678999999
Q ss_pred HHHHHHcC
Q psy3270 408 VQAAILSG 415 (655)
Q Consensus 408 ~~a~~l~~ 415 (655)
+.|+.-.+
T Consensus 467 ~lA~~a~G 474 (515)
T 3i8b_A 467 RQAAWVLS 474 (515)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 99986554
No 63
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.92 E-value=0.014 Score=63.59 Aligned_cols=75 Identities=16% Similarity=0.150 Sum_probs=56.4
Q ss_pred HHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcc-cCCCCchhHHHhHHHHHHHHHcC
Q psy3270 337 ELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSL-NLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 337 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v-~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
.+++.+++.+.-.+...++...- .. ++.|.++||+++.+.+.+.+.+.| +.++ .. ..+.++.|+|||+.|+.-.+
T Consensus 378 ~l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 378 QILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHHHHHHHHhC
Confidence 34555555555555555444332 33 788999999999999999999999 6777 55 36889999999999987665
No 64
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.63 E-value=0.015 Score=64.39 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=57.2
Q ss_pred cHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCcc-chHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHH
Q psy3270 331 TRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSI-RIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQ 409 (655)
Q Consensus 331 tr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~ 409 (655)
+|.+ +++.+++.+.-.++..++...-....++.|.++||++ +.+.+.+++.+.| +.++..+ .+.++.|+|||+.
T Consensus 410 t~~~---l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEE---IYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHH---HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHH
Confidence 5544 4555555554444444443222234578899999999 9999999999999 6777654 5678999999999
Q ss_pred HHHHcC
Q psy3270 410 AAILSG 415 (655)
Q Consensus 410 a~~l~~ 415 (655)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987554
No 65
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.63 E-value=0.015 Score=63.21 Aligned_cols=77 Identities=16% Similarity=0.209 Sum_probs=54.1
Q ss_pred HHhhHHHHhhhhHHHHHHHHcCC-CCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 337 ELCMDLFRQTLAPVERALNDAKL-DKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 337 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
++++.+++.+.-.+...++...- ....++.|.++||.++.+.+.+.+.+.| +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 377 ~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 454 (501)
T 3g25_A 377 HFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGLAVG 454 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHHHhC
Confidence 34445555554444443332210 1224688999999999999999999999 6777554 5678999999999987665
No 66
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.54 E-value=0.014 Score=63.93 Aligned_cols=73 Identities=19% Similarity=0.314 Sum_probs=53.6
Q ss_pred HhhHHHHhhhhHHHHHHH----HcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHH
Q psy3270 338 LCMDLFRQTLAPVERALN----DAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAIL 413 (655)
Q Consensus 338 ~~~~~~~~i~~~i~~~l~----~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l 413 (655)
+++.+++.+.-.++..++ ..+. .++.|.++||+++.+.+.+++.+.| +.++.++ ...++.|+|||+.|+.-
T Consensus 376 i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~a 450 (526)
T 3ezw_A 376 IIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLA 450 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHHH
Confidence 344444544433333333 3443 4688999999999999999999999 7787665 55678999999999877
Q ss_pred cC
Q psy3270 414 SG 415 (655)
Q Consensus 414 ~~ 415 (655)
.|
T Consensus 451 ~G 452 (526)
T 3ezw_A 451 VG 452 (526)
T ss_dssp TT
T ss_pred hC
Confidence 66
No 67
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.47 E-value=0.013 Score=64.05 Aligned_cols=51 Identities=20% Similarity=0.156 Sum_probs=43.0
Q ss_pred CcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 363 SIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 363 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
.++.|.++||.++.|.+.+.+.+.| +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAG 475 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcC
Confidence 4778999999999999999999999 6777654 5677999999999987665
No 68
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.42 E-value=0.029 Score=60.96 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=54.2
Q ss_pred HHhhHHHHhhhhHHHHHHHHcCC-CCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 337 ELCMDLFRQTLAPVERALNDAKL-DKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 337 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
++++.+++.+.-.+...++...- ....++.|.++||.++.+.+.+.+.+.+ +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 371 ~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 448 (495)
T 2dpn_A 371 HLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGAG 448 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhcC
Confidence 33444555555444444443311 1234678999999999999999999999 6777654 4566999999999986655
No 69
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.42 E-value=0.018 Score=62.69 Aligned_cols=51 Identities=22% Similarity=0.262 Sum_probs=44.3
Q ss_pred CcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 363 SIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 363 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
.++.|.++||+++.+.+.+.+.+.| +.++..+ .+.++.|+|||+.|+.-.|
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 453 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVG 453 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhC
Confidence 4678999999999999999999999 6777654 5778999999999987665
No 70
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.37 E-value=0.016 Score=63.09 Aligned_cols=77 Identities=23% Similarity=0.250 Sum_probs=54.3
Q ss_pred cHHHHHHHhhHHHHhhhhHHHH---HHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHH
Q psy3270 331 TRARFEELCMDLFRQTLAPVER---ALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAA 407 (655)
Q Consensus 331 tr~~~e~~~~~~~~~i~~~i~~---~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa 407 (655)
+|.++ ++.+++.+.-.+.. .|++.+. .++.|.++||+++.+.+.+.+.+.| +.++..+.. .++.|+|||
T Consensus 371 ~~~~l---~rAvlEgia~~~~~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA 442 (508)
T 3ifr_A 371 TRGHL---WRALLEAVALAFRHHVAVLDDIGH---APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAA 442 (508)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHH
Confidence 45444 44444444333333 3344443 4688999999999999999999999 677766543 468899999
Q ss_pred HHHHHHcC
Q psy3270 408 VQAAILSG 415 (655)
Q Consensus 408 ~~a~~l~~ 415 (655)
+.|+.-.+
T Consensus 443 ~lA~~a~G 450 (508)
T 3ifr_A 443 WVAAIGGG 450 (508)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 99987665
No 71
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.36 E-value=0.016 Score=63.09 Aligned_cols=76 Identities=17% Similarity=0.244 Sum_probs=53.3
Q ss_pred HhhHHHHhhhhHHHHHHHHcCC-CCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 338 LCMDLFRQTLAPVERALNDAKL-DKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 338 ~~~~~~~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
+++.+++.+.-.++..++...- ....++.|.++||+++.+.+.+++.+.| +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 375 l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 375 IIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhC
Confidence 3444455444444443332210 0124678999999999999999999999 6777654 4677999999999987665
No 72
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.33 E-value=0.9 Score=45.81 Aligned_cols=79 Identities=16% Similarity=0.302 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHcCCcceeecChHHHHHHHcccccccC-CCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCCCCcc
Q psy3270 186 QRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLK-GEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLGGE 264 (655)
Q Consensus 186 ~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~-~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lGG~ 264 (655)
....+.++-+..|+++-.|=.|-+|.-.+.+...... .+...+|+|+|||+|.+++++ ++......+ .++|.-
T Consensus 91 ~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~~~S----l~lG~v 164 (315)
T 3mdq_A 91 KQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILWKQS----FEIGGQ 164 (315)
T ss_dssp HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEEEEE----ESCCHH
T ss_pred HHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEeeeEE----Eechhh
Confidence 3445555556678887655556666544444333222 245799999999999999986 332222222 568887
Q ss_pred hHHHHH
Q psy3270 265 DFDNRL 270 (655)
Q Consensus 265 ~~d~~l 270 (655)
.+.+.+
T Consensus 165 rl~e~f 170 (315)
T 3mdq_A 165 RLIDRF 170 (315)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 777654
No 73
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.17 E-value=0.022 Score=62.07 Aligned_cols=51 Identities=24% Similarity=0.331 Sum_probs=43.6
Q ss_pred CcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 363 SIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 363 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
.++.|.++||.++.+.+.+.+.+.| +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcC
Confidence 3678999999999999999999999 6777654 5567999999999987655
No 74
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.82 E-value=0.035 Score=60.38 Aligned_cols=50 Identities=22% Similarity=0.290 Sum_probs=42.8
Q ss_pred c-ceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHHHcC
Q psy3270 364 I-HDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 364 i-~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~l~~ 415 (655)
+ +.|.++||.++.+.+.+.+.+.| +.++..+ .+.++.|+|||+.|+.-.+
T Consensus 407 ~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 407 MLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp CCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred ccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhC
Confidence 5 67999999999999999999999 6777654 4566999999999987655
No 75
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=94.55 E-value=0.082 Score=53.52 Aligned_cols=80 Identities=18% Similarity=0.139 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCCCCcc
Q psy3270 185 SQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLGGE 264 (655)
Q Consensus 185 ~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lGG~ 264 (655)
+....+..+-+..|+++-.|-.|.+|...+.+...........+|+|+|||+|.+++++ ++ .+.. ....++|+.
T Consensus 98 N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~-~~~~---~~Sl~~G~v 171 (315)
T 1t6c_A 98 NAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GY-KVRE---VISLPIGIV 171 (315)
T ss_dssp THHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TT-EEEE---EEEECCCHH
T ss_pred CHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CC-ceee---EEEEeccHH
Confidence 44455555556789988777777777666655443322345799999999999999975 34 2211 112579999
Q ss_pred hHHHHH
Q psy3270 265 DFDNRL 270 (655)
Q Consensus 265 ~~d~~l 270 (655)
.+.+.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888776
No 76
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.35 E-value=0.05 Score=58.91 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=39.3
Q ss_pred CcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHH
Q psy3270 363 SIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAI 412 (655)
Q Consensus 363 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~ 412 (655)
.++.|.++||.++++.+.+.+.+.| +.++.... .++.|.|||+.|..
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHH
Confidence 4678999999999999999999999 67776542 68999999766644
No 77
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=92.74 E-value=0.46 Score=48.55 Aligned_cols=80 Identities=16% Similarity=0.188 Sum_probs=46.5
Q ss_pred HHHHHHHHHHcCCcceeecChHHHHHHHcccccccC---CCceEEEEEeCCceeEEEEEEE--eC--CceEEEEEecCCC
Q psy3270 187 RQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLK---GEKNVLIFDLGGGTFDVSVLAI--DE--GSLFQVKSTAGDT 259 (655)
Q Consensus 187 r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~---~~~~vlV~D~GggT~dvsv~~~--~~--~~~~~v~~~~~~~ 259 (655)
...+.++-+..|+++-.|=.|-+|.-.+.+...... .....+|+|+|||+|.++++.- .. +...... ..
T Consensus 105 ~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~----Sl 180 (343)
T 3cer_A 105 EEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAF----SM 180 (343)
T ss_dssp HHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEE----EE
T ss_pred HHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeE----EE
Confidence 344455555668875444444444433333322222 2356999999999999999753 11 1011111 25
Q ss_pred CCCcchHHHHH
Q psy3270 260 HLGGEDFDNRL 270 (655)
Q Consensus 260 ~lGG~~~d~~l 270 (655)
++|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 69999988876
No 78
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=92.49 E-value=2.6 Score=42.64 Aligned_cols=67 Identities=21% Similarity=0.260 Sum_probs=44.8
Q ss_pred HhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhC--CCcccCCC---CchhHHHhHHHHHHHHHcC
Q psy3270 344 RQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFN--GKSLNLSI---NPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 344 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~ava~GAa~~a~~l~~ 415 (655)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.+.+.+. +.++..+. --|.++++|+|.+.....+
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~~ 301 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKAG 301 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhcC
Confidence 444444555555433 5679999999999999999998772 23444443 2357889998876544433
No 79
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=91.58 E-value=0.033 Score=58.54 Aligned_cols=61 Identities=15% Similarity=0.207 Sum_probs=9.9
Q ss_pred ceEEEecCCCCCHHHHHHHHHhh-hhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhh
Q psy3270 90 SEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDV 157 (655)
Q Consensus 90 ~~~vitvP~~f~~~~r~~~~~a~-~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~ 157 (655)
..+++|+|++++..+|+++.+.+ +.+|++.+.++++|+||++++|. ...+++|+|+++++.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v 166 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHI 166 (394)
T ss_dssp --------------------------------------------------------CCEEEECSSCEEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEe
Confidence 45899999999999999999965 78899999999999999999875 356788888887764
No 80
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.34 E-value=0.15 Score=54.83 Aligned_cols=71 Identities=10% Similarity=0.009 Sum_probs=52.7
Q ss_pred HHHhhHHHHh--hhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhh-hCCCcccCCCCchhHHHhHHHHHHHH
Q psy3270 336 EELCMDLFRQ--TLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDF-FNGKSLNLSINPDEAVAYGAAVQAAI 412 (655)
Q Consensus 336 e~~~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~-f~~~~v~~~~~p~~ava~GAa~~a~~ 412 (655)
..+.+.+++. +.-.++..++...- .+.|.++||++++|...+.+.+. | +.++..+. ..++.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4555666653 44455566655431 26799999999999999999999 9 77887663 456889999999964
No 81
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=90.19 E-value=16 Score=36.44 Aligned_cols=47 Identities=17% Similarity=0.138 Sum_probs=32.2
Q ss_pred cceEEEecCccch-HHHHHHHHhhhC---------CCcccCCCCchhHHHhHHHHHH
Q psy3270 364 IHDVVLVGGSIRI-PKIQKMLQDFFN---------GKSLNLSINPDEAVAYGAAVQA 410 (655)
Q Consensus 364 i~~ViLvGG~s~~-p~v~~~l~~~f~---------~~~v~~~~~p~~ava~GAa~~a 410 (655)
++.|+|.||.++. +.+.+.+++.+. ...+....-.+.+.++|||.++
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 4779999998876 665555555441 1234445556789999999876
No 82
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=90.15 E-value=0.12 Score=52.47 Aligned_cols=92 Identities=22% Similarity=0.342 Sum_probs=60.2
Q ss_pred eEeChhhhHHHHHHHHHHHHHHHhCCCCceEEEecCCC-CCHH--HH--HHH--------HHh----hhhcCCceeeecc
Q psy3270 62 KKFAPEEISSMVLTKMREIAEVYLGGKVSEAVITVPAY-FNDS--QR--QAT--------KDA----GSIAGLNVLRIIN 124 (655)
Q Consensus 62 ~~~~~~ev~a~~l~~l~~~ae~~~~~~i~~~vitvP~~-f~~~--~r--~~~--------~~a----~~~agl~~~~~i~ 124 (655)
..+++..+++.+ +.++. +.. .+.++ .+|+++|.. |... || .++ ..+ ++.+++..+.+++
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 367777777653 44432 211 22334 589999987 6541 11 111 111 4566778899999
Q ss_pred chhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 125 EPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 125 e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
||.||++.++. ....+...+++|+|+++++..+
T Consensus 148 e~~aa~~~~~~--~~~~~~~~~vvDiGggttd~~v 180 (320)
T 2zgy_A 148 ESIPAGYEVLQ--ELDELDSLLIIDLGGTTLDISQ 180 (320)
T ss_dssp SSHHHHHHHHH--HSCTTCEEEEEEECSSCEEEEE
T ss_pred CcHHHHHhhhc--cccCCCCEEEEEcCCCeEEEEE
Confidence 99999998763 2345678999999999999754
No 83
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=88.59 E-value=0.63 Score=50.44 Aligned_cols=80 Identities=18% Similarity=0.252 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCCCCcc
Q psy3270 185 SQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLGGE 264 (655)
Q Consensus 185 ~~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lGG~ 264 (655)
+....+.++-+..|+++-.|=.+-+|.-.+.+...........+|+|+|||+|.+++.+ ++......+ .++|.-
T Consensus 97 N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~~~S----l~lG~v 170 (513)
T 1u6z_A 97 NATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPILVES----RRMGCV 170 (513)
T ss_dssp THHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEEEEEE----ESCCHH
T ss_pred CHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeeeEEEE----EeccHH
Confidence 34455555556679876544444455444444433332223799999999999999874 341222222 579998
Q ss_pred hHHHHH
Q psy3270 265 DFDNRL 270 (655)
Q Consensus 265 ~~d~~l 270 (655)
.+.+.+
T Consensus 171 rlte~f 176 (513)
T 1u6z_A 171 SFAQLY 176 (513)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887766
No 84
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=87.77 E-value=10 Score=41.14 Aligned_cols=79 Identities=15% Similarity=0.165 Sum_probs=53.3
Q ss_pred HHHHHHHhhHHH-HhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCC-CCchhHHHhHHHHH
Q psy3270 332 RARFEELCMDLF-RQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLS-INPDEAVAYGAAVQ 409 (655)
Q Consensus 332 r~~~e~~~~~~~-~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~-~~p~~ava~GAa~~ 409 (655)
+.++...++..+ +-+.+.+..+.+..+ ++.|+|.||.+....+++.+.+..+-..+..+ .--|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 445544444433 334445555555554 57799999999999999999876532233333 24589999999999
Q ss_pred HHHHcC
Q psy3270 410 AAILSG 415 (655)
Q Consensus 410 a~~l~~ 415 (655)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987655
No 85
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=87.61 E-value=0.33 Score=49.99 Aligned_cols=68 Identities=15% Similarity=0.238 Sum_probs=54.3
Q ss_pred eEEEecCCCCCHHHH-HHHHHhhhhcCC------------ceeeeccchhHHHHhhccccccC----CCeeEEEEecccc
Q psy3270 91 EAVITVPAYFNDSQR-QATKDAGSIAGL------------NVLRIINEPTAAALAYGLDKNLK----GEKNVLIFDLGGG 153 (655)
Q Consensus 91 ~~vitvP~~f~~~~r-~~~~~a~~~agl------------~~~~~i~e~~Aaa~~~~~~~~~~----~~~~~~~~d~g~~ 153 (655)
.+++++|..+...+| +++.++..-.+- ..+.+++||.||++.++++.... .+...+++|+|++
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGgg 194 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSG 194 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCC
Confidence 678999999888887 588888775443 57899999999999998754221 4678899999999
Q ss_pred chhhH
Q psy3270 154 TFDVS 158 (655)
Q Consensus 154 ~~~~~ 158 (655)
+++..
T Consensus 195 Ttd~~ 199 (355)
T 3js6_A 195 TTIID 199 (355)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 99863
No 86
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=86.36 E-value=1.8 Score=46.67 Aligned_cols=77 Identities=21% Similarity=0.280 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEeCCceEEEEEecCCCCCCcch
Q psy3270 186 QRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLGGED 265 (655)
Q Consensus 186 ~r~~~~~a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lGG~~ 265 (655)
....+.++-+..|+++-.|=.|-+|.-.+.+....... ...+|+|+|||+|.++++. ++ .+.. ....++|.-.
T Consensus 102 ~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~-~~~lvvDIGGGStEl~~~~--~~-~~~~---~~Sl~lG~vr 174 (508)
T 3hi0_A 102 GPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ-PDGIAGDLGGGSLELIDIK--DK-SCGE---GITLPLGGLR 174 (508)
T ss_dssp HHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS-CEEEEEEECSSCEEEEEEE--TT-EECC---CEEESCCHHH
T ss_pred HHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC-CCeEEEEeCCCceEEEEee--CC-eeee---EEEecceEEe
Confidence 34455555566788764444455554444444333222 2459999999999999986 33 2211 1125688877
Q ss_pred HHHH
Q psy3270 266 FDNR 269 (655)
Q Consensus 266 ~d~~ 269 (655)
+.+.
T Consensus 175 l~e~ 178 (508)
T 3hi0_A 175 LSEQ 178 (508)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 7653
No 87
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=86.04 E-value=0.27 Score=51.82 Aligned_cols=91 Identities=9% Similarity=-0.000 Sum_probs=63.7
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCCceEEE-ecCCCC----------------------------CHHHHHHHHHhhhhcC
Q psy3270 66 PEEISSMVLTKMREIAEVYLGGKVSEAVI-TVPAYF----------------------------NDSQRQATKDAGSIAG 116 (655)
Q Consensus 66 ~~ev~a~~l~~l~~~ae~~~~~~i~~~vi-tvP~~f----------------------------~~~~r~~~~~a~~~ag 116 (655)
+.++...-+..+.+.|... ..+....++ .+|-.| ...-.+.+.++++.||
T Consensus 103 ~~~i~~~di~~~i~~a~~~-~~p~d~~~l~~~p~~f~vDg~~~i~~P~Gm~g~~l~~~v~~v~~~~~~v~n~~~~~~~AG 181 (419)
T 4a2a_A 103 KRSITLDILSEMQSEALEK-LKENGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSIVVPLKVYEMFYNFLQDTV 181 (419)
T ss_dssp CEECCHHHHHHHHHHHHHH-HSCTTEEEEEEEEEEEEETTTEEESCCTTCEESEEEEEEEEEEEEHHHHHHHHHHHHTTS
T ss_pred CCEECHHHHHHHHHHhhhh-cCCCCCEEEEEEeeEEEECCccCcCCCCCCcccEEEEEEEEEEEeHHHHHHHHHHHHHcC
Confidence 4566666667777766543 235555554 333322 1234567889999999
Q ss_pred CceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhhHH
Q psy3270 117 LNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSM 159 (655)
Q Consensus 117 l~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~~l 159 (655)
|++..++.||.|+++.+..+. ..+.+.+.+|+|+++++..+
T Consensus 182 L~v~~lv~ep~Aaa~a~l~~~--~~~~gv~vvDiGggttdisi 222 (419)
T 4a2a_A 182 KSPFQLKSSLVSTAEGVLTTP--EKDRGVVVVNLGYNFTGLIA 222 (419)
T ss_dssp CSCEEEEEHHHHHHHHHCCHH--HHHHCEEEEEECSSSEEEEE
T ss_pred CcEEEEEEHHHHHHHHhhccc--cccCCEEEEEECCCcEEEEE
Confidence 999999999999998875432 24468999999999999754
No 88
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=83.04 E-value=26 Score=37.90 Aligned_cols=203 Identities=14% Similarity=0.129 Sum_probs=97.5
Q ss_pred CcceEEEEe-CCCCCHHHHHHHHH---HHHHcCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEEEe
Q psy3270 170 KVSEAVITV-PAYFNDSQRQATKD---AGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLAID 245 (655)
Q Consensus 170 ~~~~~vitV-Pa~~~~~~r~~~~~---a~~~AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~ 245 (655)
+++.+++|. |..|+.- |-.+-- -+...|.+.+. |+.-.|-+++.........+ +++-+.||++.+-.+ .
T Consensus 72 ~id~ia~~~gPG~~~~l-~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p---~~l~vsGg~t~~~~~--~ 144 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSL-RVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP---LTLYVSGGNTQVIAY--V 144 (540)
T ss_dssp GCCEEEEEEESSCHHHH-HHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC---EEEEECSSCEEEEEE--E
T ss_pred HCcEEEEecCCCchhhH-HHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC---cEEEEcCCCcEEEEE--e
Confidence 677777777 6655433 222221 23334555443 45555544443333322222 666677888766544 4
Q ss_pred CCceEEEEEecCCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHhcCCCCceEEEEccccCCcc
Q psy3270 246 EGSLFQVKSTAGDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAKRTLSSSTEASLEIDALHEGID 325 (655)
Q Consensus 246 ~~~~~~v~~~~~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K~~ls~~~~~~i~i~~~~~~~~ 325 (655)
.+ .+++++..-|. --|+-||..- .. .|......+ .+...|...+ . .+.++....+.+
T Consensus 145 ~~-~~~~lg~t~d~-s~G~~~D~~a-~~--------lgl~~~gg~----~ie~lA~~g~------~--~~~~p~~~~~~~ 201 (540)
T 3en9_A 145 SK-KYRVFGETLDI-AVGNCLDQFA-RY--------VNLPHPGGP----YIEELARKGK------K--LVDLPYTVKGMD 201 (540)
T ss_dssp TT-EEEEEEEBSSS-CHHHHHHHHH-HH--------TTCCSSCHH----HHHHHHHTCC------C--CCCCCCCEETTE
T ss_pred CC-ceEEEeeccch-HhHHHHHHHH-HH--------cCCCCCCHH----HHHHHHHcCC------c--cCcCCCCCCCcc
Confidence 55 78888776543 3466666422 21 222222222 1222222211 0 011111111222
Q ss_pred eEEe-------------ecHHHHHHHhhH-HHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhC--C
Q psy3270 326 FYSK-------------ITRARFEELCMD-LFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFN--G 389 (655)
Q Consensus 326 ~~~~-------------itr~~~e~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~ 389 (655)
+++. .+..++...++. +++.+.+.+.++++..+ ++.|+|+||-+....+++.+.+.+. +
T Consensus 202 ~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~~~~ 276 (540)
T 3en9_A 202 IAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCEGQN 276 (540)
T ss_dssp ECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHHHTT
T ss_pred eecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHHhcC
Confidence 2210 112222222222 33444455666666655 4679999999999999999998763 2
Q ss_pred CcccCCC---CchhHHHhHHH
Q psy3270 390 KSLNLSI---NPDEAVAYGAA 407 (655)
Q Consensus 390 ~~v~~~~---~p~~ava~GAa 407 (655)
.++..+. -.|.++..|.+
T Consensus 277 ~~~~~p~~~~~~Dngamia~~ 297 (540)
T 3en9_A 277 VDFYVPPKEFCGDNGAMIAWL 297 (540)
T ss_dssp CEEECCCHHHHSSCHHHHHHH
T ss_pred CEEEeCCCcCCCCCHHHHHHH
Confidence 2333332 12445555544
No 89
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=82.66 E-value=3.9 Score=41.73 Aligned_cols=73 Identities=18% Similarity=0.194 Sum_probs=47.8
Q ss_pred HhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCccc----CCCCchhHHHhHHHHHHHHH
Q psy3270 338 LCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLN----LSINPDEAVAYGAAVQAAIL 413 (655)
Q Consensus 338 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~----~~~~p~~ava~GAa~~a~~l 413 (655)
+..-+.+-+...|-+.++... ..++.|+++||+++.|.+.++|++.+++..+. ..++|+.-=|..-|++|...
T Consensus 261 v~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~ 337 (371)
T 3qbx_A 261 IQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRF 337 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHH
Confidence 334444444555555555433 13578999999999999999999999655442 23456655556667777543
No 90
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=82.22 E-value=2.4 Score=44.66 Aligned_cols=87 Identities=15% Similarity=0.062 Sum_probs=66.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCC--CceEEEecCCCCCHHHHHHHHHhh-hhcCCceeeeccchhHHHHhhccccccCC-Ce
Q psy3270 68 EISSMVLTKMREIAEVYLGGK--VSEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKG-EK 143 (655)
Q Consensus 68 ev~a~~l~~l~~~ae~~~~~~--i~~~vitvP~~f~~~~r~~~~~a~-~~agl~~~~~i~e~~Aaa~~~~~~~~~~~-~~ 143 (655)
+....+++++.. +.++.. -..+++|.|+..+...|+.+.+.. +.+|++.+.++.++.+|++++|....... ..
T Consensus 103 d~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~ 179 (427)
T 3dwl_A 103 DHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSL 179 (427)
T ss_dssp HHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCC
T ss_pred HHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCc
Confidence 445566666543 234432 247899999999999999999987 78999999999999999999986543322 45
Q ss_pred eEEEEeccccchhh
Q psy3270 144 NVLIFDLGGGTFDV 157 (655)
Q Consensus 144 ~~~~~d~g~~~~~~ 157 (655)
..+++|+|++.+..
T Consensus 180 tglVVDiG~g~T~v 193 (427)
T 3dwl_A 180 TGTVVDSGDGVTHI 193 (427)
T ss_dssp CEEEEEESSSCEEE
T ss_pred eEEEEECCCCceEE
Confidence 78999999987764
No 91
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=81.65 E-value=21 Score=35.20 Aligned_cols=44 Identities=27% Similarity=0.307 Sum_probs=28.7
Q ss_pred cCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEE
Q psy3270 197 AGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVL 242 (655)
Q Consensus 197 AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 242 (655)
.|++ +.+.|+-.|+|++-..........+++++-+|.| .-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 3654 6789999999987543322234567888888887 334443
No 92
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=77.93 E-value=3.1 Score=44.62 Aligned_cols=83 Identities=17% Similarity=0.142 Sum_probs=62.8
Q ss_pred ChhhhHHHHHHHHHHHHHHHhCCC--Cc-eEEEecCCCCCHHHHHHHHHhh-hhcCCceeeeccchhHHHHhhccccccC
Q psy3270 65 APEEISSMVLTKMREIAEVYLGGK--VS-EAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLK 140 (655)
Q Consensus 65 ~~~ev~a~~l~~l~~~ae~~~~~~--i~-~~vitvP~~f~~~~r~~~~~a~-~~agl~~~~~i~e~~Aaa~~~~~~~~~~ 140 (655)
.-=+.+..+++++... .++.. -. .++++.|+..+...|+.+.+.. +.+|+..+.++.++.++++++|..
T Consensus 90 ~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~---- 162 (498)
T 3qb0_A 90 IDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP---- 162 (498)
T ss_dssp SCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS----
T ss_pred ccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC----
Confidence 3344556667776532 34432 22 5899999999999999999974 889999999999999999988862
Q ss_pred CCeeEEEEeccccchhh
Q psy3270 141 GEKNVLIFDLGGGTFDV 157 (655)
Q Consensus 141 ~~~~~~~~d~g~~~~~~ 157 (655)
..+++|+|++.+..
T Consensus 163 ---tglVVDiG~g~T~v 176 (498)
T 3qb0_A 163 ---NCLVVDIGHDTCSV 176 (498)
T ss_dssp ---SEEEEEECSSCEEE
T ss_pred ---eEEEEEcCCCcEEE
Confidence 35888988887663
No 93
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=77.89 E-value=5.6 Score=40.57 Aligned_cols=72 Identities=15% Similarity=0.220 Sum_probs=47.3
Q ss_pred HHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCccc----CCCCchhHHHhHHHHHHHH
Q psy3270 337 ELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLN----LSINPDEAVAYGAAVQAAI 412 (655)
Q Consensus 337 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~----~~~~p~~ava~GAa~~a~~ 412 (655)
++..-+.+=+...|.+.++... ..+.|+++||+++.|.+.++|++.+++.++. ..++|+.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 4444455555556666665542 3568999999999999999999999654432 2345664444445666654
No 94
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=77.24 E-value=3.6 Score=46.40 Aligned_cols=65 Identities=23% Similarity=0.253 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhC--CCcccCC---CCchhHHHhHHHHHHHHHcC
Q psy3270 346 TLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFN--GKSLNLS---INPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 346 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~---~~p~~ava~GAa~~a~~l~~ 415 (655)
+.+.+.++.+..+ ++.|+|+||-+....+++.+.+.+. +.++..+ .--|-++|+|.|+.|+....
T Consensus 681 L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 681 TYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 3344444444444 5679999999999999999998872 3333322 23489999999999875543
No 95
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=77.15 E-value=5.7 Score=44.98 Aligned_cols=62 Identities=18% Similarity=0.267 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCC--CcccCCC---CchhHHHhHHHHHHHH
Q psy3270 346 TLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNG--KSLNLSI---NPDEAVAYGAAVQAAI 412 (655)
Q Consensus 346 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~--~~v~~~~---~p~~ava~GAa~~a~~ 412 (655)
+.+.+.++.+..+ ++.|+|.||......+++.+.+.+.. .++..+. --|..+|.|+|++|+.
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 3444555555444 56799999999999999999998743 2343332 2388999999998864
No 96
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=77.08 E-value=7.1 Score=43.17 Aligned_cols=64 Identities=20% Similarity=0.223 Sum_probs=45.2
Q ss_pred HhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccC---CCCchhHHHhHHHHHHHH
Q psy3270 344 RQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNL---SINPDEAVAYGAAVQAAI 412 (655)
Q Consensus 344 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~---~~~p~~ava~GAa~~a~~ 412 (655)
+.+.+.+.++.+..+ ++.|+|+||-+....+++.+.+.+.+.++.. ..--|.++++|.|+.|+.
T Consensus 585 ~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 585 QGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 333444444444443 5679999999999999999999884333332 224489999999998853
No 97
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=76.33 E-value=63 Score=31.95 Aligned_cols=44 Identities=25% Similarity=0.332 Sum_probs=30.0
Q ss_pred cCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEE
Q psy3270 197 AGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVL 242 (655)
Q Consensus 197 AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 242 (655)
.|++ +.+.|+..|+|++...........+++++-+|.| .-.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEE
Confidence 3665 7899999999988543322224567888889988 555554
No 98
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=76.33 E-value=5.4 Score=40.39 Aligned_cols=69 Identities=20% Similarity=0.273 Sum_probs=48.5
Q ss_pred HHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhC--CCcccCCC---CchhHHHhHHHHHHHHHcC
Q psy3270 342 LFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFN--GKSLNLSI---NPDEAVAYGAAVQAAILSG 415 (655)
Q Consensus 342 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~--~~~v~~~~---~p~~ava~GAa~~a~~l~~ 415 (655)
+.+.+.+.+.++++..+ ++.|+|+||.+....+++.+.+.+. +.++..+. --|.++++|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 34445555666666555 4679999999999999999998873 23444332 3478999999977655544
No 99
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=75.57 E-value=5.4 Score=43.78 Aligned_cols=62 Identities=16% Similarity=0.311 Sum_probs=53.3
Q ss_pred ceEEEecCCCCCHHHHHHHHHhh-hhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhh
Q psy3270 90 SEAVITVPAYFNDSQRQATKDAG-SIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDV 157 (655)
Q Consensus 90 ~~~vitvP~~f~~~~r~~~~~a~-~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~ 157 (655)
..+++|.|...+...|+.+.+.+ +.+|+..+.++.++.++++++|+ ....+++|+|++.+..
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~V 284 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRI 284 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEE
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEE
Confidence 46899999999999999999987 57999999999999999998875 3467888888887663
No 100
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=75.14 E-value=70 Score=32.99 Aligned_cols=26 Identities=12% Similarity=0.331 Sum_probs=24.0
Q ss_pred CCcceEEEecCcc-chHHHHHHHHhhh
Q psy3270 362 GSIHDVVLVGGSI-RIPKIQKMLQDFF 387 (655)
Q Consensus 362 ~~i~~ViLvGG~s-~~p~v~~~l~~~f 387 (655)
..+|.|+++||-+ +.+.||+.+.+.+
T Consensus 329 ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 329 HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred CCCCEEEECccccccCHHHHHHHHhhH
Confidence 4699999999999 9999999999876
No 101
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=74.93 E-value=25 Score=36.21 Aligned_cols=43 Identities=12% Similarity=-0.021 Sum_probs=31.7
Q ss_pred HHHHhhhhHHHHHHHHcCCCCCCcceEEEecCcc-chHHHHHHHHhhh
Q psy3270 341 DLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSI-RIPKIQKMLQDFF 387 (655)
Q Consensus 341 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 387 (655)
-+..++.+.|-...... ..+|.|+++||-+ +.+.||+.+.+.+
T Consensus 304 ~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 304 IFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 34455555555544433 3589999999999 9999999999775
No 102
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=73.75 E-value=51 Score=32.65 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=28.3
Q ss_pred cCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEE
Q psy3270 197 AGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVL 242 (655)
Q Consensus 197 AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 242 (655)
.|++ +.+.|+..|+|++...........+++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 3554 7899999999987432221123467888888888 344444
No 103
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=73.74 E-value=84 Score=32.19 Aligned_cols=44 Identities=18% Similarity=0.274 Sum_probs=28.9
Q ss_pred cCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEE
Q psy3270 197 AGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVL 242 (655)
Q Consensus 197 AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 242 (655)
.|++ +.+.|+..|+|++...........+++++-+|.| .-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 3665 6889999999987533222123467888888887 445544
No 104
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=67.74 E-value=6.4 Score=38.89 Aligned_cols=49 Identities=18% Similarity=0.263 Sum_probs=36.9
Q ss_pred CcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHH
Q psy3270 363 SIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAI 412 (655)
Q Consensus 363 ~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~ 412 (655)
+++.|+|.||.+..+.+.+.+++.+...++..+. .+.+.+.||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 3567999999887788888888877444555555 667899999988854
No 105
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=65.03 E-value=39 Score=34.63 Aligned_cols=43 Identities=7% Similarity=0.068 Sum_probs=29.6
Q ss_pred HHHHhhhhHHHHHHHHcCCCCCCcceEEEecCcc-chHHHHHHHHhhh
Q psy3270 341 DLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSI-RIPKIQKMLQDFF 387 (655)
Q Consensus 341 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f 387 (655)
-+..++.+.|-...... ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 305 ~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 305 VYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp HHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHH
Confidence 34444444444443332 3589999999998 5688999998876
No 106
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=64.11 E-value=54 Score=33.68 Aligned_cols=43 Identities=7% Similarity=0.098 Sum_probs=32.0
Q ss_pred HHHhhhhHHHHHHHHcCCCCCCcceEEEecCcc-chHHHHHHHHhhhC
Q psy3270 342 LFRQTLAPVERALNDAKLDKGSIHDVVLVGGSI-RIPKIQKMLQDFFN 388 (655)
Q Consensus 342 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~f~ 388 (655)
+..++.+.|-......+ .+|.|+++||-+ +.+.+|+.+.+.+.
T Consensus 305 f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 305 YDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 44555555554444432 489999999999 99999999998873
No 107
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=62.62 E-value=6.9 Score=39.90 Aligned_cols=45 Identities=20% Similarity=0.302 Sum_probs=27.6
Q ss_pred CCcceeecChHHHHHHHc-----cccccc-CCCceEEEEEeCCceeEEEEEE
Q psy3270 198 GLNVLRIINEPTAAALAY-----GLDKNL-KGEKNVLIFDLGGGTFDVSVLA 243 (655)
Q Consensus 198 Gl~~~~li~Ep~Aaal~~-----~~~~~~-~~~~~vlV~D~GggT~dvsv~~ 243 (655)
|+. +++|+-.+=|.+.| ....-. ....+++|+|+|||+|.+++..
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 543 56666555444443 222110 1234699999999999999873
No 108
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=60.78 E-value=25 Score=38.37 Aligned_cols=76 Identities=18% Similarity=0.291 Sum_probs=58.7
Q ss_pred HHHHHHH-HHHhCCCCc-----eEEEecCCCCCHHHHHHHHHh-hhhcCCceeeeccchhHHHHhhccccccCCCeeEEE
Q psy3270 75 TKMREIA-EVYLGGKVS-----EAVITVPAYFNDSQRQATKDA-GSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLI 147 (655)
Q Consensus 75 ~~l~~~a-e~~~~~~i~-----~~vitvP~~f~~~~r~~~~~a-~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~ 147 (655)
.++.+++ ..+++.... .++++.|..++...|+.+.+. -+..|+..+.++.++.++..++|.. ..++
T Consensus 178 e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-------tglV 250 (593)
T 4fo0_A 178 EVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-------STCI 250 (593)
T ss_dssp HHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS-------EEEE
T ss_pred HHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC-------ceEE
Confidence 3444444 345776544 389999999999999999887 5688999999999999999988764 4677
Q ss_pred Eeccccchhh
Q psy3270 148 FDLGGGTFDV 157 (655)
Q Consensus 148 ~d~g~~~~~~ 157 (655)
+|+|.+.+..
T Consensus 251 VDiG~~~T~v 260 (593)
T 4fo0_A 251 VDVGDQKTSV 260 (593)
T ss_dssp EEECSSCEEE
T ss_pred EEeCCCceee
Confidence 8888776653
No 109
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=60.73 E-value=57 Score=33.28 Aligned_cols=44 Identities=7% Similarity=-0.051 Sum_probs=30.6
Q ss_pred hHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccc-hHHHHHHHHhhh
Q psy3270 340 MDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIR-IPKIQKMLQDFF 387 (655)
Q Consensus 340 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~-~p~v~~~l~~~f 387 (655)
+-+..++.+.|-...... ..+|.|+++||-+. .+.+++.+.+.+
T Consensus 295 d~f~yri~k~Iga~aa~L----g~vDaIVfTGGIgens~~vR~~i~~~l 339 (391)
T 3r9p_A 295 SVFTHRLRKYIGAYLAVL----GHTDVISFTAGIGENDAAVRRDAVSGM 339 (391)
T ss_dssp HHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHh----CCCCEEEECcccccCCHHHHHHHHHHH
Confidence 334455555554444333 25899999999987 699999998876
No 110
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=59.16 E-value=28 Score=34.01 Aligned_cols=49 Identities=16% Similarity=0.127 Sum_probs=31.9
Q ss_pred cceEEEecCccchHHHHHHHHhhhC-----------CCcccCCCCchhHHHhHHHHHHHH
Q psy3270 364 IHDVVLVGGSIRIPKIQKMLQDFFN-----------GKSLNLSINPDEAVAYGAAVQAAI 412 (655)
Q Consensus 364 i~~ViLvGG~s~~p~v~~~l~~~f~-----------~~~v~~~~~p~~ava~GAa~~a~~ 412 (655)
++.|+|.||.+..+.+.+.+++.+. ..++....-.+.+.++|||.++..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 4679999998876766666655441 122333334567899999988754
No 111
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=57.31 E-value=1e+02 Score=31.40 Aligned_cols=25 Identities=20% Similarity=0.325 Sum_probs=22.5
Q ss_pred CcceEEEecCcc-chHHHHHHHHhhh
Q psy3270 363 SIHDVVLVGGSI-RIPKIQKMLQDFF 387 (655)
Q Consensus 363 ~i~~ViLvGG~s-~~p~v~~~l~~~f 387 (655)
.+|.|+++||-+ ..+.+|+.+.+.+
T Consensus 313 gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 313 KLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp SCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred CCCEEEECCccccCcHHHHHHHHhhc
Confidence 599999999988 7799999999876
No 112
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=56.78 E-value=7.5 Score=38.96 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=25.4
Q ss_pred eecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEEE
Q psy3270 203 RIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVLA 243 (655)
Q Consensus 203 ~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 243 (655)
...+-|.|.|...+... ....+++|+||.|||+..+.
T Consensus 109 ~aaanw~ASa~~~A~~~----~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 109 VSASNWCGTAKWVSKNI----EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp TBCCSSHHHHHHHHHHT----CSSEEEEEECSSCEEEEEEE
T ss_pred HHhcCHHHHHHHHHHhc----CCCEEEEEcCcchhhhhhhc
Confidence 34455777776333221 13579999999999999886
No 113
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=53.05 E-value=16 Score=38.53 Aligned_cols=44 Identities=16% Similarity=0.263 Sum_probs=28.8
Q ss_pred cceeecChHHHHHHHc-----ccccc----------cCCCceEEEEEeCCceeEEEEEE
Q psy3270 200 NVLRIINEPTAAALAY-----GLDKN----------LKGEKNVLIFDLGGGTFDVSVLA 243 (655)
Q Consensus 200 ~~~~li~Ep~Aaal~~-----~~~~~----------~~~~~~vlV~D~GggT~dvsv~~ 243 (655)
..+++|+-.+=|.+.| .+..- ......++|+|+|||++.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 4578888776655554 22210 01145689999999999999874
No 114
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=50.96 E-value=33 Score=33.69 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=35.7
Q ss_pred cceEEEecCccchHHHHHHHHhhhCCC-----cccCCCCchhHHHhHHHHHHHHH
Q psy3270 364 IHDVVLVGGSIRIPKIQKMLQDFFNGK-----SLNLSINPDEAVAYGAAVQAAIL 413 (655)
Q Consensus 364 i~~ViLvGG~s~~p~v~~~l~~~f~~~-----~v~~~~~p~~ava~GAa~~a~~l 413 (655)
++.|+|.||.+..+.+.+.+++.+... .+....-.+.+.++|||.++...
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 567999999998877777777776321 23334455679999999887543
No 115
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=49.54 E-value=79 Score=32.64 Aligned_cols=25 Identities=16% Similarity=0.275 Sum_probs=22.7
Q ss_pred CcceEEEecCcc-chHHHHHHHHhhh
Q psy3270 363 SIHDVVLVGGSI-RIPKIQKMLQDFF 387 (655)
Q Consensus 363 ~i~~ViLvGG~s-~~p~v~~~l~~~f 387 (655)
.+|.|+++||-+ ..+.||+.+.+.+
T Consensus 339 ~vDaIVFTgGIGEns~~vR~~v~~~l 364 (415)
T 3sk3_A 339 RLDAVVFTGGIGENAAMVRELSLGKL 364 (415)
T ss_dssp CCCEEEEEHHHHTTCHHHHHHHHHTC
T ss_pred CCCEEEECCccccCCHHHHHHHHhhc
Confidence 589999999998 7999999999876
No 116
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=49.11 E-value=38 Score=33.52 Aligned_cols=48 Identities=25% Similarity=0.284 Sum_probs=32.1
Q ss_pred cceEEEecCccc-hHHHHHHHHhhhCC---------CcccCCCCchhHHHhHHHHHHH
Q psy3270 364 IHDVVLVGGSIR-IPKIQKMLQDFFNG---------KSLNLSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 364 i~~ViLvGG~s~-~p~v~~~l~~~f~~---------~~v~~~~~p~~ava~GAa~~a~ 411 (655)
++.|+|.||.+. .+.+.+.+++.+.. .++....-.+.+.++|||.++.
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 320 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLAL 320 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHH
Confidence 467999999886 57777666665521 2233333566789999998764
No 117
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=48.04 E-value=31 Score=34.46 Aligned_cols=47 Identities=21% Similarity=0.121 Sum_probs=32.1
Q ss_pred cceEEEecCccchHHHHHHHHhhhCCC--------cccCCCCchhHHHhHHHHHH
Q psy3270 364 IHDVVLVGGSIRIPKIQKMLQDFFNGK--------SLNLSINPDEAVAYGAAVQA 410 (655)
Q Consensus 364 i~~ViLvGG~s~~p~v~~~l~~~f~~~--------~v~~~~~p~~ava~GAa~~a 410 (655)
++.|+|-||.+..+.+.+.+++.+... .+....-.+.+.++|||..+
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 467999999988877777777666211 22223345689999999754
No 118
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=47.12 E-value=23 Score=34.58 Aligned_cols=47 Identities=19% Similarity=0.155 Sum_probs=32.3
Q ss_pred cceEEEecCccchHHHHHHHHhhhCCC------cccCCCCchhHHHhHHHHHH
Q psy3270 364 IHDVVLVGGSIRIPKIQKMLQDFFNGK------SLNLSINPDEAVAYGAAVQA 410 (655)
Q Consensus 364 i~~ViLvGG~s~~p~v~~~l~~~f~~~------~v~~~~~p~~ava~GAa~~a 410 (655)
++.|+|.||.+..+.+.+.+++.+... ++......+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 456888898886677878887776332 12223345678999999876
No 119
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=43.76 E-value=24 Score=36.28 Aligned_cols=48 Identities=17% Similarity=0.111 Sum_probs=32.6
Q ss_pred CcceEEEecCccchHH-HHHHHHhhhCCC---cccCCCCchhHHHhHHHHHH
Q psy3270 363 SIHDVVLVGGSIRIPK-IQKMLQDFFNGK---SLNLSINPDEAVAYGAAVQA 410 (655)
Q Consensus 363 ~i~~ViLvGG~s~~p~-v~~~l~~~f~~~---~v~~~~~p~~ava~GAa~~a 410 (655)
+++.|+|.||.+..+. +.+.+.+.+... .+......+.+.+.||+..+
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~ 346 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVL 346 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHH
Confidence 5688999999987544 777777777322 12223233468999999876
No 120
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=43.24 E-value=15 Score=36.35 Aligned_cols=63 Identities=17% Similarity=0.109 Sum_probs=39.5
Q ss_pred hhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccc--hHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHH
Q psy3270 339 CMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIR--IPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 339 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~ 411 (655)
+..++++..+.+-..+...-. . +++.|+|.||.+. .|.+.+.+++.+ ..|+.+.+.||+++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i--------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL--------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC--------CCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc--------cCCCCCHHHHHHHHHh
Confidence 334555555555555544322 2 5678999999865 466666676653 1256778999998873
No 121
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=40.80 E-value=22 Score=27.82 Aligned_cols=30 Identities=17% Similarity=0.225 Sum_probs=27.2
Q ss_pred eEEEecCCCCCHHHHHHHHHhhhhcCCcee
Q psy3270 91 EAVITVPAYFNDSQRQATKDAGSIAGLNVL 120 (655)
Q Consensus 91 ~~vitvP~~f~~~~r~~~~~a~~~agl~~~ 120 (655)
+-.++.|+.|+..+|..+-+.|+..||...
T Consensus 33 ~~~l~FP~sLs~~eR~~IH~lA~~~GL~h~ 62 (86)
T 1msz_A 33 KMQLEFPPSLNSHDRLRVHQIAEEHGLRHD 62 (86)
T ss_dssp CSEEEECTTCCSHHHHHHHHHHHHTTEEEE
T ss_pred CcEEEcCCCCCHHHHHHHHHHHHHcCCCcc
Confidence 358999999999999999999999999764
No 122
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=39.60 E-value=1.9e+02 Score=25.16 Aligned_cols=64 Identities=14% Similarity=0.146 Sum_probs=41.7
Q ss_pred HHHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhccC-C--ccCHHHHHHHHHHHHHHHHHHHHHHH
Q psy3270 570 AAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWLEGN-S--LAEKEEFEDRLKTLQQTCTPIMTKLH 642 (655)
Q Consensus 570 ~akN~LEs~iy~~r~~l~~~~~~~~~~e~~~l~~~l~e~~~WL~~~-~--~a~~~~~~~kl~~L~~~~~~i~~r~~ 642 (655)
+|.-.|+.|.-.+..-+ .+|..+.++|.+......+. . .-..++|+.|+..+++....+-..+.
T Consensus 79 eA~~~L~eYn~rL~~E~---------~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~ 145 (152)
T 4fla_A 79 EACLLLAEYNGRLAAEL---------EDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQ 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44445555555554444 36778888888877666653 1 23556888888888888777766543
No 123
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=37.89 E-value=76 Score=31.24 Aligned_cols=49 Identities=24% Similarity=0.303 Sum_probs=32.7
Q ss_pred CcceEEEecCccch-----HHHHHHHHhhhCC------CcccCCCCchhHHHhHHHHHHH
Q psy3270 363 SIHDVVLVGGSIRI-----PKIQKMLQDFFNG------KSLNLSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 363 ~i~~ViLvGG~s~~-----p~v~~~l~~~f~~------~~v~~~~~p~~ava~GAa~~a~ 411 (655)
+++.|+|-||.++. +.+++.+++.+.. .++....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 35778998888765 4677777776521 1222333456899999998874
No 124
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=37.75 E-value=13 Score=36.43 Aligned_cols=68 Identities=6% Similarity=-0.075 Sum_probs=41.8
Q ss_pred HhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccch--HHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHHHH
Q psy3270 338 LCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRI--PKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQAAI 412 (655)
Q Consensus 338 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~--p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a~~ 412 (655)
....++++..+.+-..+ ...+ ..+++.|+|.||-+.. +.+++.+++.. .++ ..|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~--~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG--LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT--CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC--Cee---cccCcCHHHHHHHHHHh
Confidence 34445555555555555 2221 1146779999998876 66777776643 122 23668889999999854
No 125
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=36.31 E-value=40 Score=35.39 Aligned_cols=44 Identities=20% Similarity=0.328 Sum_probs=27.5
Q ss_pred cceeecChHHHHHHHc-----cccccc-CCCceEEEEEeCCceeEEEEEE
Q psy3270 200 NVLRIINEPTAAALAY-----GLDKNL-KGEKNVLIFDLGGGTFDVSVLA 243 (655)
Q Consensus 200 ~~~~li~Ep~Aaal~~-----~~~~~~-~~~~~vlV~D~GggT~dvsv~~ 243 (655)
..+++|+..+=+.+++ .+..-. .....+.++|+|||++.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 3577887766554443 222110 1235688999999999998764
No 126
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=34.80 E-value=81 Score=32.02 Aligned_cols=48 Identities=23% Similarity=0.292 Sum_probs=30.6
Q ss_pred cceEEEecCccch-HHHHHHHHhhhC-------CCcccCCCCchhHHHhHHHHHHH
Q psy3270 364 IHDVVLVGGSIRI-PKIQKMLQDFFN-------GKSLNLSINPDEAVAYGAAVQAA 411 (655)
Q Consensus 364 i~~ViLvGG~s~~-p~v~~~l~~~f~-------~~~v~~~~~p~~ava~GAa~~a~ 411 (655)
++.|+|.||.+.. |.+.+.+++.+. ..++....-.+.+.+.|||..+.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 4679999998864 666666665541 11222233445689999998774
No 127
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=34.60 E-value=82 Score=33.32 Aligned_cols=30 Identities=23% Similarity=0.459 Sum_probs=23.8
Q ss_pred CceEEEEEeCCceeEEEEEEEeCCceEEEE
Q psy3270 224 EKNVLIFDLGGGTFDVSVLAIDEGSLFQVK 253 (655)
Q Consensus 224 ~~~vlV~D~GggT~dvsv~~~~~~~~~~v~ 253 (655)
...++.+|+||.++-+.++++.....+++.
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~ 108 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTT 108 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEE
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEE
Confidence 357999999999999999999765444444
No 128
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=33.85 E-value=2.6e+02 Score=24.97 Aligned_cols=66 Identities=12% Similarity=0.115 Sum_probs=37.1
Q ss_pred CCCcHHHHHHHHHHHHHhhhhcHHHHHHHHHHhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhcc
Q psy3270 541 GRLSKDDIDRMLAEAEKYKAEDDKQRERVAAKNKLESYAFAVKQAAEDSGSKLSDADKTSVSQACSATLTWLEG 614 (655)
Q Consensus 541 ~~l~~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~e~~~l~~~l~e~~~WL~~ 614 (655)
..||+++.+++.+...++..+-.. .+.++-+.-.+++..+.. +...++..+++.+.+.++..-|..
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~~~~------Lr~ql~akr~EL~aL~~a--~~~DeakI~aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQTSA------LRQQLISKRYEYNALLTA--SSPDTAKINAVAKEMESLGQKLDE 131 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 459999988888877766554322 222233333344444432 345566666777777666666554
No 129
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=29.45 E-value=58 Score=32.05 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=37.7
Q ss_pred hhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhC
Q psy3270 339 CMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFN 388 (655)
Q Consensus 339 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 388 (655)
++...+.+...++++|+++++++++|+.|+.-|+++++ -+.+.+.|+
T Consensus 213 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 213 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 33445677788999999999999999999999998765 456777884
No 130
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=29.42 E-value=9.6 Score=37.50 Aligned_cols=67 Identities=12% Similarity=-0.009 Sum_probs=37.5
Q ss_pred hhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhCCCcccCCCCchhHHHhHHHHHH
Q psy3270 339 CMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFNGKSLNLSINPDEAVAYGAAVQA 410 (655)
Q Consensus 339 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~~~~v~~~~~p~~ava~GAa~~a 410 (655)
+..++++..+.+-..+ ...+ ..+++.|+|.||-+.. +.+.+++.+....+ ....+..+.+.||++++
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~-~i~~~~~a~~~GAa~la 276 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGI-QIGKILQSPMEGLIQYH 276 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTC-CEEEECSCTHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCc-EEeecCCCHHHHHHHHH
Confidence 3344455544444444 2221 1146779999988876 56666666632111 11234567888998775
No 131
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=29.23 E-value=79 Score=32.02 Aligned_cols=17 Identities=18% Similarity=0.171 Sum_probs=14.2
Q ss_pred CCcceeecChHHHHHHH
Q psy3270 198 GLNVLRIINEPTAAALA 214 (655)
Q Consensus 198 Gl~~~~li~Ep~Aaal~ 214 (655)
|+..+.+.|+-.|+|++
T Consensus 128 ~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 128 PPGHSAILNDLEAGGFG 144 (373)
T ss_dssp CTTSEEEEEHHHHHHHH
T ss_pred CCCCEEEEccHhHHhcc
Confidence 55468899999999998
No 132
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=29.13 E-value=1.5e+02 Score=31.26 Aligned_cols=54 Identities=22% Similarity=0.386 Sum_probs=33.2
Q ss_pred CCceEEEEEeCCceeEEEEEEEeCCc----eEEEEEecCCCC----CCcchHHHHHHHHHHHHHH
Q psy3270 223 GEKNVLIFDLGGGTFDVSVLAIDEGS----LFQVKSTAGDTH----LGGEDFDNRLVTFFADEFK 279 (655)
Q Consensus 223 ~~~~vlV~D~GggT~dvsv~~~~~~~----~~~v~~~~~~~~----lGG~~~d~~l~~~~~~~~~ 279 (655)
+...+|.+|+||.+|=|..+++.++. .+++.......+ .| . ...|++|+.+.+.
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i~ 136 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECIS 136 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHHH
Confidence 44579999999999999999997653 354443322111 22 1 3566667655443
No 133
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=28.85 E-value=68 Score=30.88 Aligned_cols=100 Identities=12% Similarity=-0.010 Sum_probs=55.6
Q ss_pred CceEEEecCCCCCHHHHHHHHHhhhhcCCceeeeccc-hhHHHHhhcccccc------CCCeeEEEEec--cccchhhHH
Q psy3270 89 VSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINE-PTAAALAYGLDKNL------KGEKNVLIFDL--GGGTFDVSM 159 (655)
Q Consensus 89 i~~~vitvP~~f~~~~r~~~~~a~~~agl~~~~~i~e-~~Aaa~~~~~~~~~------~~~~~~~~~d~--g~~~~~~~l 159 (655)
.-....|.|.........+..+.+...|++++.++++ +...+ +..... .-+.+.+.+-. -...+...+
T Consensus 33 ~~~~~~~lp~~~~~~~~~~~~~~al~~g~~p~~ii~~~~L~~g---g~~~~V~~p~l~~Vg~g~i~v~qeh~s~~~~~~~ 109 (262)
T 1xrs_B 33 KVQLSFTLPLKNNERSAEAAKQIALKMGLEEPSVVMQQSLDEE---FTFFVVYGNFVQSVNYNEIHVEAVNSEILSMEET 109 (262)
T ss_dssp CEEEEEEESSCSSHHHHHHHHHHHHTTSSCCCEEEEEEEEETT---EEEEEEEEC-----------------CCCCHHHH
T ss_pred eEEEEEEecCCCChHHHHHHHHHHHHcCCChHHHHcccccCCC---ceEEEEeeeceeecCCCeEEchHHHHHHHHHHHH
Confidence 4456788999998888888999999999999999997 54444 111100 00011111111 111122233
Q ss_pred HHHHHHHhcCCcceEEEEeCCCCCHHHHHHHH
Q psy3270 160 REIAEVYLGGKVSEAVITVPAYFNDSQRQATK 191 (655)
Q Consensus 160 ~~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~ 191 (655)
....+...+...+-++-|+|..+.+--...+.
T Consensus 110 ~~~l~~~~~~~~~Vvlatv~gD~HdiG~~iv~ 141 (262)
T 1xrs_B 110 DEYIKENIGRKIVVVGASTGTDAHTVGIDAIM 141 (262)
T ss_dssp HHHHHHHTCSCEEEEEEEBTTCCCCHHHHHHH
T ss_pred HHHHHhhcCCCCEEEEEeCCCCCchHHHHHHh
Confidence 44444555545554556677777766655544
No 134
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=28.44 E-value=1.3e+02 Score=25.62 Aligned_cols=71 Identities=15% Similarity=0.185 Sum_probs=43.0
Q ss_pred EEEeecCCCceeEEEEE---------ecCcccccCCcceeeEEecCCCCCCCCCCeEEEEEEeCCCeeEEEEEE--eccC
Q psy3270 460 TFTTYSDNQNAVTIQVF---------EGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFDLDANGILNVSAK--DSST 528 (655)
Q Consensus 460 ~~~~~~d~q~~~~i~i~---------~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~g~l~v~~~--~~~~ 528 (655)
+|...+++.+.+.|.+. +|+....+++.+.-.+.=+.-+|...|.. =.++|++..+|++.++.. ....
T Consensus 37 ~lKIlSdDgtF~Ni~m~~~~~aiIt~~GtY~~~SD~~Y~E~IeKni~lp~l~g~~-N~l~fE~~~dnlm~lky~~~~dl~ 115 (142)
T 4i95_A 37 TFKVLSDDGRIVNFTIRPGTDAIITGYGTYRQISAAAYKESIEKNIHLPMLDNKD-NILEFEMGAGGVMYLKYFIEKDLN 115 (142)
T ss_dssp EEEEECTTSEEEEEECCTTSCCEEEEEEEEEEEETTEEEEEEEEESSSGGGTTEE-EEEEEEECSTTEEEEEEEEEECTT
T ss_pred cEEEEcCCCcEEEEEEecCCCcEEEEeEEEEecCCcceeeeecccccCcccCCCc-cEEEEEEccCCEEEEEEEeeccCC
Confidence 44444455554444444 45555666776665555444456666654 468999999999999873 2334
Q ss_pred CCc
Q psy3270 529 GKA 531 (655)
Q Consensus 529 ~~~ 531 (655)
|++
T Consensus 116 G~e 118 (142)
T 4i95_A 116 GNE 118 (142)
T ss_dssp SCE
T ss_pred CCc
Confidence 554
No 135
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=27.56 E-value=1.9e+02 Score=29.74 Aligned_cols=48 Identities=33% Similarity=0.435 Sum_probs=37.7
Q ss_pred cceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHH-HHHHccccc
Q psy3270 171 VSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTA-AALAYGLDK 219 (655)
Q Consensus 171 ~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~A-aal~~~~~~ 219 (655)
++++|++.|.. +..--..+.-||..+|.+.+.-+--.-| ||++||...
T Consensus 160 V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTet 208 (423)
T 4gic_A 160 VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTET 208 (423)
T ss_dssp CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSS
T ss_pred CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCc
Confidence 66788888973 2223357889999999999999999888 789998753
No 136
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=27.38 E-value=94 Score=34.02 Aligned_cols=82 Identities=20% Similarity=0.171 Sum_probs=54.3
Q ss_pred EEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHH-hhhCCCcccCCCCchhHHHhH
Q psy3270 327 YSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQ-DFFNGKSLNLSINPDEAVAYG 405 (655)
Q Consensus 327 ~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~-~~f~~~~v~~~~~p~~ava~G 405 (655)
.+.||..++.++... --.+..-++-.|+.++++..+|+.|+|.||++.---+.+.+. -.+|.........--.+.-.|
T Consensus 499 ~i~itq~DIr~~qlA-KaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~~~~~ki~~vGN~sl~G 577 (631)
T 3zyy_X 499 DIVITEADIQNLIRA-KAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPDIDINKFSYVGNSSLKG 577 (631)
T ss_dssp CEEEEHHHHHHHHHH-HHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCCSCGGGEEECSCHHHHH
T ss_pred cEEEeHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCCccccCEEEECcHHHHH
Confidence 468999999886542 234556678889999999999999999999988766666664 333322211111122355566
Q ss_pred HHHH
Q psy3270 406 AAVQ 409 (655)
Q Consensus 406 Aa~~ 409 (655)
|.+.
T Consensus 578 A~~~ 581 (631)
T 3zyy_X 578 ARKA 581 (631)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 137
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=27.37 E-value=1.4e+02 Score=30.86 Aligned_cols=45 Identities=22% Similarity=0.304 Sum_probs=37.0
Q ss_pred CcceEEEEeCCCCCHHHHHHHHHHHHHcCCcceeecChHHH-HHHHcccc
Q psy3270 170 KVSEAVITVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTA-AALAYGLD 218 (655)
Q Consensus 170 ~~~~~vitVPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~A-aal~~~~~ 218 (655)
-+.++|++.|.. --..+.-||..+|.+.+.-+--.-| ||++||..
T Consensus 153 GV~~Iv~~tPp~----i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTe 198 (434)
T 1kae_A 153 GCKKVVLCSPPP----IADEILYAAQLCGVQDVFNVGGAQAIAALAFGTE 198 (434)
T ss_dssp TCSEEEEEECSS----CCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCS
T ss_pred CCCeEEEECCCC----CCHHHHHHHHHcCCCEEeecccHHHHHHHHcCCC
Confidence 467888888982 2246788999999999999999888 78999975
No 138
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=27.28 E-value=2.1e+02 Score=25.01 Aligned_cols=45 Identities=13% Similarity=0.067 Sum_probs=28.2
Q ss_pred eccccchhhHHHHHHHHHhcCCcceEEEEeCCCCCHHHHHHHHHH
Q psy3270 149 DLGGGTFDVSMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDA 193 (655)
Q Consensus 149 d~g~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~~r~~~~~a 193 (655)
-.+.|.+-..+.+.++..+|....-..++.|..-...-++.+.++
T Consensus 26 I~sHG~~A~gl~~s~~~i~G~~~~v~av~~~~~~~~~~~~~~~~~ 70 (159)
T 3mtq_A 26 FASHGSFANGLLNSVELILGKQPDIHTLCAYVEEEVDLTQQVEAL 70 (159)
T ss_dssp EEEETTHHHHHHHHHHHHHCCCTTEEEEEETSCSSSCHHHHHHHH
T ss_pred EEeCcHHHHHHHHHHHHHcCCCCCeEEEECCCCCHHHHHHHHHHH
Confidence 344555888999999999998655456677655332334444443
No 139
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=26.69 E-value=1e+02 Score=30.12 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=28.1
Q ss_pred CCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEE
Q psy3270 198 GLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVL 242 (655)
Q Consensus 198 Gl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 242 (655)
|++ +.+.|+-.|+|++-.........++++++-+|-| .-.+++
T Consensus 98 ~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 98 XIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp CSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred CCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 665 7899999999987543322223467888888876 334443
No 140
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=25.94 E-value=2e+02 Score=22.56 Aligned_cols=56 Identities=21% Similarity=0.393 Sum_probs=33.3
Q ss_pred eeEEEEEecCcccccCCcceeeEEecCCCCCCCCCCeEEEEEEeCCCeeEEEEEEeccCCCceeeeeecC
Q psy3270 470 AVTIQVFEGERAMTKDNNLLGTFNLTGIPPAPRGVPKIEVTFDLDANGILNVSAKDSSTGKAERITIQND 539 (655)
Q Consensus 470 ~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~i~~~ 539 (655)
.-.+.|+|.....-...-.-|.|.|+++++. ...|.|.|++++ ..|++..+++...
T Consensus 26 ~A~V~v~qnG~~iy~~~VppGpF~I~dl~~~-------------~~~Gdl~V~v~e-adG~~~~~~vp~~ 81 (90)
T 3fcg_A 26 QARVEVLRDGYTVSNELVPSGPFELANLPLG-------------GGSGELKVIIHE-SDGTKQVFTVPYD 81 (90)
T ss_dssp SEEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEEC-TTSCEEEEEEEEC
T ss_pred CcEEEEEECCEEEEEeEeCCCCeEEcCCccc-------------CCceeEEEEEEE-CCCCEEEEEECcc
Confidence 4567777755444444555688999888763 234666676665 3566666655543
No 141
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=25.74 E-value=2.4e+02 Score=29.40 Aligned_cols=25 Identities=20% Similarity=0.474 Sum_probs=21.3
Q ss_pred CCceEEEEEeCCceeEEEEEEEeCC
Q psy3270 223 GEKNVLIFDLGGGTFDVSVLAIDEG 247 (655)
Q Consensus 223 ~~~~vlV~D~GggT~dvsv~~~~~~ 247 (655)
+...++.+|+||.++-+.++.....
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~ 83 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGR 83 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETT
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCC
Confidence 4456899999999999999998755
No 142
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=25.06 E-value=1.8e+02 Score=28.79 Aligned_cols=44 Identities=25% Similarity=0.217 Sum_probs=28.7
Q ss_pred cCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEE
Q psy3270 197 AGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVL 242 (655)
Q Consensus 197 AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 242 (655)
.|++ +.+.|+..|||++...........+++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3665 6889999999987543222123467888888887 444444
No 143
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=24.76 E-value=1.7e+02 Score=23.87 Aligned_cols=41 Identities=17% Similarity=0.144 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHhccCCc-cCHHHHHHHHHHHHH
Q psy3270 592 KLSDADKTSVSQACSATLTWLEGNSL-AEKEEFEDRLKTLQQ 632 (655)
Q Consensus 592 ~~~~~e~~~l~~~l~e~~~WL~~~~~-a~~~~~~~kl~~L~~ 632 (655)
.+-|+-+.+|.+.+.++.++|.+..+ ...++|......|.+
T Consensus 62 ~mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~~~Ake~l~~ 103 (108)
T 1h7c_A 62 MMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDS 103 (108)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHCGGGTTSHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Confidence 34467778999999999999986532 566777777666654
No 144
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=24.14 E-value=2.8e+02 Score=30.27 Aligned_cols=98 Identities=14% Similarity=0.177 Sum_probs=61.3
Q ss_pred eEEEEEeCCceeEEEEEEEeCCceEEEEEec-CCCCCCcchHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHH
Q psy3270 226 NVLIFDLGGGTFDVSVLAIDEGSLFQVKSTA-GDTHLGGEDFDNRLVTFFADEFKRKHKKDILANTRAVRRLRTACERAK 304 (655)
Q Consensus 226 ~vlV~D~GggT~dvsv~~~~~~~~~~v~~~~-~~~~lGG~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K 304 (655)
.=+-+|+|..|.-..++.+..|..+...+.- .....|.+-+++.-+. . +
T Consensus 207 ~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a-~-~---------------------------- 256 (631)
T 3zyy_X 207 FGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYV-D-E---------------------------- 256 (631)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHH-H-H----------------------------
T ss_pred eEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHH-h-c----------------------------
Confidence 4578999999999999988888544443322 2224565555543210 0 0
Q ss_pred HhcCCCCceEEEEccccCCcceEEeecHHHHHHHhhHHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHH
Q psy3270 305 RTLSSSTEASLEIDALHEGIDFYSKITRARFEELCMDLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKI 379 (655)
Q Consensus 305 ~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v 379 (655)
+..-++.+-+.+++.+-.++.+..+++++++.+|..++++|-++..-.+
T Consensus 257 --------------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLl 305 (631)
T 3zyy_X 257 --------------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLF 305 (631)
T ss_dssp --------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHH
T ss_pred --------------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHH
Confidence 0001223333344566677788888889999999999999987655444
No 145
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=23.92 E-value=89 Score=25.95 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=32.1
Q ss_pred EEEEEeCC-CeeEEEEEEeccCCCceeeeeecCCCCCcHHHHHHHHHHHHHh
Q psy3270 508 EVTFDLDA-NGILNVSAKDSSTGKAERITIQNDKGRLSKDDIDRMLAEAEKY 558 (655)
Q Consensus 508 ~v~~~~d~-~g~l~v~~~~~~~~~~~~~~i~~~~~~l~~~ei~~~~~~~~~~ 558 (655)
.+.|.+|. .|.+.|++.|..||+.. ..++++++-++.+.+.++
T Consensus 57 ~L~F~vdee~~~~vVkVvD~~TgEVI--------RqIPpEe~L~l~~~l~e~ 100 (117)
T 2hc5_A 57 HLKFELHDKLNEYYVKVIEDSTNEVI--------REIPPKRWLDFYAAMTEF 100 (117)
T ss_dssp CEEEEEEEETTEEEEEEEETTTTEEE--------EEECHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCcEEEEEEECCCCcEE--------EeCChHHHHHHHHHHHHh
Confidence 47788877 68899999999998753 126788887777766554
No 146
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=23.69 E-value=27 Score=33.36 Aligned_cols=21 Identities=10% Similarity=-0.078 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHhccC
Q psy3270 595 DADKTSVSQACSATLTWLEGN 615 (655)
Q Consensus 595 ~~e~~~l~~~l~e~~~WL~~~ 615 (655)
++=+.++...+.++.+|+...
T Consensus 168 ee~r~kl~~~~~el~~~l~p~ 188 (243)
T 2a01_A 168 DELRQRLAARLEALKENGGAR 188 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcchh
Confidence 344566777777777777543
No 147
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=23.37 E-value=76 Score=31.23 Aligned_cols=45 Identities=18% Similarity=0.115 Sum_probs=36.1
Q ss_pred HHHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhC
Q psy3270 341 DLFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFN 388 (655)
Q Consensus 341 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 388 (655)
-..+.+...++++|+++++++++|+.|+.-|+++++ -+.+.+.|+
T Consensus 217 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 217 FAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 344667788899999999999999999999988765 345777774
No 148
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=23.33 E-value=81 Score=30.76 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=35.6
Q ss_pred HHHhhhhHHHHHHHHcCCCCCCcceEEEecCccchHHHHHHHHhhhC
Q psy3270 342 LFRQTLAPVERALNDAKLDKGSIHDVVLVGGSIRIPKIQKMLQDFFN 388 (655)
Q Consensus 342 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f~ 388 (655)
..+.+.+.++++|+++++++++|+.|++-|+++++ -+.+.+.|+
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 44566778999999999999999999999998775 345777774
No 149
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=23.10 E-value=47 Score=33.20 Aligned_cols=48 Identities=17% Similarity=0.101 Sum_probs=28.2
Q ss_pred eEEEecCccch-HHHHHHHHhhhCC----------CcccCCCCchhHHHhHHHHHHHHHc
Q psy3270 366 DVVLVGGSIRI-PKIQKMLQDFFNG----------KSLNLSINPDEAVAYGAAVQAAILS 414 (655)
Q Consensus 366 ~ViLvGG~s~~-p~v~~~l~~~f~~----------~~v~~~~~p~~ava~GAa~~a~~l~ 414 (655)
.|+|.||.+.. |.+.+.+++.+.. .++......+ +.+.|||..+....
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~-a~~~GAa~la~~~~ 326 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRH-SSALGGASLGARHI 326 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESS-CTHHHHHHHHHHTT
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCC-ChHHHHHHHHHHhc
Confidence 68888888753 6666655554411 1111121234 88999998886443
No 150
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=22.83 E-value=4.8e+02 Score=24.97 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=9.4
Q ss_pred HHHHhhHHHHHHHHHHHHh
Q psy3270 569 VAAKNKLESYAFAVKQAAE 587 (655)
Q Consensus 569 ~~akN~LEs~iy~~r~~l~ 587 (655)
.+.|+.|..|.-+++..+.
T Consensus 69 eelr~kL~p~~~el~~~l~ 87 (273)
T 3s84_A 69 EQLRRQLTPYAQRMERVLR 87 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555443
No 151
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=22.40 E-value=3.3e+02 Score=22.44 Aligned_cols=38 Identities=21% Similarity=0.114 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHhccC---CccCHHHHHHHHHHHHH
Q psy3270 595 DADKTSVSQACSATLTWLEGN---SLAEKEEFEDRLKTLQQ 632 (655)
Q Consensus 595 ~~e~~~l~~~l~e~~~WL~~~---~~a~~~~~~~kl~~L~~ 632 (655)
|+-+.+|.+.+.++++||.+. ...+.++|..-...|.+
T Consensus 66 pd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~~ 106 (116)
T 3mxz_A 66 PDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVAD 106 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHH
Confidence 566778999999999999852 23556777777666653
No 152
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=21.37 E-value=1.3e+02 Score=28.47 Aligned_cols=72 Identities=18% Similarity=0.211 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCHHHHHHHHHHHHHc-CCcceeecChHH------------------HHHHHcccccccCCCceEEEE
Q psy3270 170 KVSEAVITVPAYFNDSQRQATKDAGSIA-GLNVLRIINEPT------------------AAALAYGLDKNLKGEKNVLIF 230 (655)
Q Consensus 170 ~~~~~vitVPa~~~~~~r~~~~~a~~~A-Gl~~~~li~Ep~------------------Aaal~~~~~~~~~~~~~vlV~ 230 (655)
++..++++.|. +.....++.+++.. +..+..+ ..++ |+|++..... +..++|+
T Consensus 56 ~i~~i~IsSVv---p~~~~~~~~~~~~~~~~~p~~v-~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~----~~~~iVv 127 (249)
T 3bex_A 56 EIKGIGVASVV---PTQNTVIERFSQKYFHISPIWV-KAKNGCVKWNVKNPSEVGADRVANVVAFVKEY----GKNGIII 127 (249)
T ss_dssp GEEEEEEEESC---HHHHHHHHHHHHHHHSCCCEEC-CCCSSSSEECSSCGGGSCHHHHHHHHHHHHHT----CSCEEEE
T ss_pred cCCEEEEEcCc---HHHHHHHHHHHHHhcCCCeEEE-EccCCCceeccCChhhcCHHHHHHHHHHHHHc----CCCEEEE
Q ss_pred EeCCceeEEEEEEEeCCceEEEEEecCCCCCCc
Q psy3270 231 DLGGGTFDVSVLAIDEGSLFQVKSTAGDTHLGG 263 (655)
Q Consensus 231 D~GggT~dvsv~~~~~~~~~~v~~~~~~~~lGG 263 (655)
|+|-.||=-.+ .+| .++||
T Consensus 128 D~GTA~T~d~v---~~g-----------~~lGG 146 (249)
T 3bex_A 128 DMGTATTVDLV---VNG-----------SYEGG 146 (249)
T ss_dssp EESSEEEEEEE---ETT-----------EEEEE
T ss_pred EcCCceEEEEE---eCC-----------eEeeE
No 153
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=21.23 E-value=1.2e+02 Score=30.04 Aligned_cols=55 Identities=24% Similarity=0.257 Sum_probs=36.6
Q ss_pred HHHHHHHHhhhhcCCceeeeccchhHHHHhhccccccCCCeeEEEEeccccchhh
Q psy3270 103 SQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDV 157 (655)
Q Consensus 103 ~~r~~~~~a~~~agl~~~~~i~e~~Aaa~~~~~~~~~~~~~~~~~~d~g~~~~~~ 157 (655)
.....+..+.+.+|+++.-+-.+..|...+.|....+......+++|+|||++..
T Consensus 98 N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl 152 (315)
T 1t6c_A 98 NAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEY 152 (315)
T ss_dssp THHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEE
Confidence 3344455555678998765555666665555654444335568999999999985
No 154
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=21.16 E-value=4.2e+02 Score=25.43 Aligned_cols=44 Identities=23% Similarity=0.302 Sum_probs=28.8
Q ss_pred cCCcceeecChHHHHHHHcccccccCCCceEEEEEeCCceeEEEEE
Q psy3270 197 AGLNVLRIINEPTAAALAYGLDKNLKGEKNVLIFDLGGGTFDVSVL 242 (655)
Q Consensus 197 AGl~~~~li~Ep~Aaal~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 242 (655)
.|++ +.+.|+-.|+|++-..........+++++-+|.| .-.+++
T Consensus 97 ~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv 140 (297)
T 4htl_A 97 TGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIF 140 (297)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEE
Confidence 3665 7899999999987543222224567888888877 334443
Done!