Query psy3272
Match_columns 115
No_of_seqs 105 out of 2103
Neff 11.1
Searched_HMMs 29240
Date Fri Aug 16 20:50:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rbs_A Myomesin-1; immunoglobu 99.9 9.6E-21 3.3E-25 113.1 14.2 111 1-113 32-205 (207)
2 2r15_A Myomesin-1; sarcomeric 99.9 4.1E-20 1.4E-24 109.8 16.1 111 2-114 33-209 (212)
3 3b43_A Titin; I-SET IG fold, e 99.9 4.1E-20 1.4E-24 124.0 16.1 113 1-115 413-570 (570)
4 3lcy_A Titin; A-BAND, IG tande 99.9 6.5E-20 2.2E-24 107.6 15.1 112 2-115 37-196 (197)
5 2rik_A Titin; I-SET IG fold, p 99.9 6.6E-20 2.3E-24 113.1 15.8 112 2-115 129-284 (284)
6 2a38_A Titin; Z1Z2, structural 99.9 5.6E-20 1.9E-24 107.9 14.0 113 2-114 35-194 (194)
7 2j8h_A Titin, connectin; cardi 99.8 1.9E-19 6.4E-24 105.9 14.6 113 2-115 34-197 (197)
8 2va4_A NCAM2, N-CAM 2, neural 99.8 4.5E-19 1.5E-23 103.8 14.5 109 2-114 34-192 (192)
9 2y25_A Myomesin; structural pr 99.8 8.6E-19 3E-23 109.4 16.3 111 2-114 138-314 (317)
10 3b43_A Titin; I-SET IG fold, e 99.8 6.2E-19 2.1E-23 118.3 16.2 112 1-114 320-475 (570)
11 2wv3_A Neuroplastin; igcam, me 99.8 6.9E-19 2.4E-23 103.2 14.6 105 2-114 35-189 (190)
12 2rik_A Titin; I-SET IG fold, p 99.8 2.2E-18 7.4E-23 106.3 16.5 111 2-114 35-190 (284)
13 4fa8_A Secreted protein BARF1; 99.8 4.9E-19 1.7E-23 105.5 12.7 107 2-108 26-195 (203)
14 2yd1_A Tyrosine-protein phosph 99.8 2E-18 6.8E-23 102.8 15.1 112 2-114 36-199 (212)
15 2yd6_A PTPRD protein; hydrolas 99.8 3.7E-18 1.3E-22 101.7 14.7 111 2-114 36-203 (212)
16 2c5d_C AXL oncogene, tyrosine- 99.8 3E-18 1E-22 100.7 14.2 108 2-113 33-191 (195)
17 2v44_A NCAM2, neural cell adhe 99.8 3.1E-18 1.1E-22 100.2 13.8 109 3-113 32-187 (189)
18 3kld_A Contactin 4, axcam, BIG 99.8 8.4E-19 2.9E-23 112.7 12.0 108 1-114 234-382 (384)
19 3ojm_B Fibroblast growth facto 99.8 7.7E-19 2.6E-23 105.3 10.6 111 2-114 49-220 (231)
20 1bih_A Hemolin; insect immunit 99.8 1.4E-18 5E-23 111.3 12.1 112 2-113 242-394 (395)
21 1hng_A CD2; T lymphocyte adhes 99.8 6.8E-19 2.3E-23 102.6 9.6 110 2-114 28-175 (176)
22 3grw_A Fibroblast growth facto 99.8 1.7E-18 5.8E-23 104.6 11.5 111 2-114 45-217 (241)
23 1rhf_A Tyrosine-protein kinase 99.8 8.9E-18 3E-22 97.7 14.1 108 2-113 32-181 (182)
24 3p3y_A Neurofascin; IG domains 99.8 3.1E-18 1.1E-22 110.0 12.2 109 2-115 252-403 (404)
25 2v5t_A NCAM2, N-CAM 2, neural 99.8 4.3E-18 1.5E-22 99.3 11.8 110 2-114 32-187 (189)
26 3s97_C Contactin-1; carbonic a 99.8 2.9E-18 9.9E-23 100.8 10.6 112 2-115 40-201 (201)
27 1epf_A NCAM, protein (neural c 99.8 1.3E-17 4.3E-22 97.6 13.3 110 2-112 33-188 (191)
28 2nzi_A Titin; IG-domain, FNIII 99.8 4.6E-17 1.6E-21 101.3 15.8 112 2-114 34-196 (305)
29 2jll_A NCAM2, neural cell adhe 99.8 6.7E-17 2.3E-21 103.5 16.7 113 1-113 29-192 (389)
30 2y23_A Myomesin; structural pr 99.8 3.6E-17 1.2E-21 101.9 14.7 111 1-113 137-310 (312)
31 3k0w_A Mucosa-associated lymph 99.8 9.5E-18 3.3E-22 100.4 11.5 102 2-114 48-201 (218)
32 1qz1_A Neural cell adhesion mo 99.8 1.1E-17 3.8E-22 103.4 12.1 111 2-115 130-290 (291)
33 2iep_A Muscle-specific kinase 99.8 1.2E-17 4.2E-22 97.7 11.6 110 2-114 37-189 (192)
34 1e07_A Carcinoembryonic antige 99.8 1.6E-17 5.3E-22 112.5 13.3 109 2-114 496-639 (642)
35 2vr9_A Roundabout 1, ROBO; imm 99.8 2.1E-17 7.2E-22 98.5 12.3 112 2-113 39-204 (217)
36 3laf_A Deleted in colorectal c 99.8 1E-17 3.5E-22 107.6 11.7 109 2-114 251-400 (403)
37 3sgj_C Human FCG3A receptor; r 99.8 5.5E-18 1.9E-22 100.9 9.4 100 3-114 39-173 (204)
38 2v5m_A Dscam; neurobiology SPL 99.8 2E-17 6.8E-22 105.9 12.7 109 1-113 241-387 (388)
39 3bp6_B Programmed cell death 1 99.8 7.7E-18 2.6E-22 99.5 9.7 111 2-114 37-192 (202)
40 2wim_A N-CAM 2, NCAM2, neural 99.8 2.8E-17 9.6E-22 101.6 12.4 110 2-114 128-283 (291)
41 3jz7_A MCAR, CAR, coxsackievir 99.8 2.2E-17 7.7E-22 97.8 11.4 87 28-114 82-211 (214)
42 3ry4_A Low affinity immunoglob 99.8 8.6E-18 3E-22 96.8 9.2 101 2-114 35-170 (170)
43 3qs7_E FL cytokine receptor; i 99.8 8.6E-18 2.9E-22 109.6 10.0 110 2-114 258-413 (423)
44 1f97_A Junction adhesion molec 99.8 6E-18 2.1E-22 100.2 8.4 109 2-114 31-206 (212)
45 1fnl_A Low affinity immunoglob 99.8 1.4E-17 4.8E-22 96.7 9.8 99 4-114 40-173 (175)
46 1cs6_A Axonin-1; neural cell a 99.7 1.7E-17 5.7E-22 106.1 10.9 105 2-114 237-381 (382)
47 1f2q_A High affinity immunoglo 99.7 1.2E-17 4E-22 97.0 9.1 100 3-114 36-170 (176)
48 1ry7_B FGFR-3, fibroblast grow 99.7 4.4E-18 1.5E-22 107.1 7.6 111 2-114 153-326 (334)
49 2y25_A Myomesin; structural pr 99.7 5.5E-17 1.9E-21 101.3 12.3 108 2-113 37-198 (317)
50 1jbj_A CD3 epsilon and gamma e 99.7 2E-17 6.9E-22 97.1 9.8 92 2-105 27-179 (186)
51 3qs9_E FL cytokine receptor; i 99.7 2.2E-17 7.4E-22 110.3 10.9 110 2-114 258-413 (527)
52 4fqp_A Poliovirus receptor; im 99.7 2.4E-17 8.1E-22 103.2 10.4 113 1-115 147-304 (313)
53 1itb_B Type 1 interleukin-1 re 99.7 7.5E-17 2.6E-21 100.8 12.5 108 2-114 139-313 (315)
54 2yd9_A Receptor-type tyrosine- 99.7 3E-17 1E-21 102.3 10.5 108 2-114 138-290 (304)
55 2o26_X MAST/stem cell growth f 99.7 6E-17 2.1E-21 100.3 11.0 108 2-114 121-287 (290)
56 2ny1_B T-cell surface glycopro 99.7 2.9E-17 1E-21 95.8 9.0 86 29-114 67-178 (184)
57 2fbo_J V1V2;, variable region- 99.7 4.2E-17 1.4E-21 98.9 9.0 85 29-113 89-250 (250)
58 2v9r_A Roundabout homolog 1; p 99.7 3E-16 1E-20 92.9 12.3 113 2-114 39-201 (212)
59 2x1w_L Vascular endothelial gr 99.7 2.9E-16 1E-20 93.7 12.2 109 2-115 38-207 (213)
60 2y23_A Myomesin; structural pr 99.7 5.6E-16 1.9E-20 96.5 13.8 106 1-108 31-195 (312)
61 3oq3_B IFN-alpha/beta binding 99.7 3.5E-16 1.2E-20 98.7 12.8 107 2-113 159-328 (329)
62 3ejj_X Macrophage colony-stimu 99.7 3.8E-16 1.3E-20 96.4 12.7 107 3-114 121-280 (289)
63 1nbq_A JAM, junctional adhesio 99.7 1.7E-17 6E-22 98.0 6.2 110 2-115 34-209 (209)
64 3dmk_A DOWN syndrome cell adhe 99.7 1.8E-16 6E-21 109.8 12.0 110 2-113 650-807 (816)
65 3b5h_A Cervical EMMPRIN, HAB18 99.7 7.5E-16 2.6E-20 89.7 13.0 102 3-114 31-182 (184)
66 4f80_A Butyrophilin subfamily 99.7 5.7E-16 2E-20 93.0 12.8 87 28-114 81-212 (226)
67 4frw_A Poliovirus receptor-rel 99.7 1.1E-16 3.8E-21 94.7 9.2 85 29-113 78-209 (218)
68 3mj6_A Junctional adhesion mol 99.7 1.5E-16 5.2E-21 97.4 9.9 86 29-114 83-236 (268)
69 3p2t_A Leukocyte immunoglobuli 99.7 9.5E-17 3.2E-21 94.6 8.5 110 2-114 33-195 (196)
70 3kld_A Contactin 4, axcam, BIG 99.7 7.1E-16 2.4E-20 99.1 12.9 109 2-114 133-293 (384)
71 3rjd_A High affinity immunoglo 99.7 3.1E-16 1E-20 95.6 10.7 100 3-114 33-166 (262)
72 3qs9_E FL cytokine receptor; i 99.7 4.1E-16 1.4E-20 104.2 12.0 107 1-113 355-508 (527)
73 1hnf_A CD2; T lymphocyte adhes 99.7 9.9E-16 3.4E-20 89.8 12.1 104 2-111 31-177 (182)
74 1sy6_A T-cell surface glycopro 99.7 1.4E-16 5E-21 94.7 8.6 105 1-114 29-203 (204)
75 2yd9_A Receptor-type tyrosine- 99.7 4.2E-16 1.4E-20 97.1 11.1 102 2-106 36-191 (304)
76 4dep_C Interleukin-1 receptor 99.7 1.3E-16 4.6E-21 101.0 8.7 106 2-113 155-331 (349)
77 4fom_A Poliovirus receptor-rel 99.7 8.4E-18 2.9E-22 104.9 3.0 113 1-115 144-300 (308)
78 3laf_A Deleted in colorectal c 99.7 3.3E-16 1.1E-20 100.6 10.5 110 2-114 151-310 (403)
79 2ec8_A MAST/stem cell growth f 99.7 5.4E-16 1.9E-20 102.9 11.7 109 4-114 244-410 (524)
80 1qz1_A Neural cell adhesion mo 99.7 1.9E-15 6.5E-20 93.3 13.1 102 2-104 33-180 (291)
81 2ifg_A High affinity nerve gro 99.7 6.5E-17 2.2E-21 102.8 6.5 109 2-114 188-344 (347)
82 1e07_A Carcinoembryonic antige 99.7 9.8E-16 3.4E-20 103.8 12.3 102 2-107 318-454 (642)
83 2d3v_A Leukocyte immunoglobuli 99.7 2.4E-16 8.3E-21 92.9 7.4 98 2-103 33-180 (196)
84 1wio_A CD4, T-cell surface gly 99.7 3.3E-16 1.1E-20 99.8 8.0 102 1-114 125-292 (363)
85 3mtr_A N-CAM-1, NCAM-1, neural 99.7 5.1E-15 1.7E-19 88.3 12.6 108 2-109 48-203 (215)
86 2wim_A N-CAM 2, NCAM2, neural 99.7 3E-15 1E-19 92.5 11.9 101 2-104 33-178 (291)
87 4fmk_A Poliovirus receptor-rel 99.7 3.9E-16 1.3E-20 92.8 7.5 85 29-113 82-217 (225)
88 1uct_A Immunoglobulin alpha FC 99.6 7.5E-16 2.6E-20 92.5 8.2 110 2-114 37-197 (218)
89 3u83_A Poliovirus receptor-rel 99.6 3.9E-16 1.3E-20 98.1 7.3 86 29-114 193-319 (331)
90 1wio_A CD4, T-cell surface gly 99.6 2.5E-15 8.6E-20 95.8 11.0 112 2-114 211-362 (363)
91 3o4o_C Interleukin-1 receptor 99.6 1.7E-15 5.8E-20 95.6 10.0 109 2-114 55-219 (339)
92 3dmk_A DOWN syndrome cell adhe 99.6 4.6E-15 1.6E-19 102.8 12.9 101 2-114 373-525 (816)
93 1oll_A NK receptor; immune sys 99.6 9.2E-15 3.1E-19 85.7 12.0 110 2-114 32-187 (188)
94 4dkd_C Macrophage colony-stimu 99.6 1.6E-15 5.6E-20 93.7 9.2 108 2-114 120-280 (292)
95 3d9a_L Light chain of hyhel10 99.6 6.2E-15 2.1E-19 87.6 11.4 111 2-112 31-210 (213)
96 1ugn_A LIR1, leukocyte immunog 99.6 2.7E-15 9.3E-20 88.5 9.5 109 2-114 33-197 (198)
97 4dep_C Interleukin-1 receptor 99.6 5.2E-15 1.8E-19 93.7 11.3 109 2-114 48-216 (349)
98 2gi7_A GPVI protein; IG-like d 99.6 1E-15 3.6E-20 89.5 7.4 100 2-113 36-183 (184)
99 3mj8_L Stimulatory hamster ant 99.6 4.1E-15 1.4E-19 88.3 10.1 94 18-111 58-209 (213)
100 1ccz_A Protein (CD58); LFA-3, 99.6 2.3E-15 7.9E-20 87.4 8.7 109 2-112 24-168 (171)
101 1dr9_A B7-1 (CD80), T lymphocy 99.6 1.4E-14 4.7E-19 85.5 12.0 109 2-111 28-197 (201)
102 2ocw_A Polymeric-immunoglobuli 99.6 9.4E-15 3.2E-19 98.0 12.6 112 3-114 34-220 (585)
103 3r4d_A CEA-related cell adhesi 99.6 4E-15 1.4E-19 88.0 9.5 85 29-114 70-199 (208)
104 2ec8_A MAST/stem cell growth f 99.6 4.9E-15 1.7E-19 98.3 10.8 108 2-114 144-308 (524)
105 3oq3_B IFN-alpha/beta binding 99.6 2E-15 6.9E-20 95.2 8.5 106 2-114 68-223 (329)
106 2if7_A SLAM family member 6; N 99.6 8.3E-15 2.8E-19 86.3 10.5 106 2-110 29-187 (193)
107 3rjd_A High affinity immunoglo 99.6 3.3E-15 1.1E-19 90.9 8.7 103 2-114 113-261 (262)
108 3o4o_C Interleukin-1 receptor 99.6 7.4E-16 2.5E-20 97.2 5.8 109 2-113 155-333 (339)
109 3sbw_C Programmed cell death 1 99.6 5.9E-14 2E-18 83.7 13.8 86 28-114 78-210 (222)
110 4i0k_A CD276 antigen; immunogl 99.6 1.2E-15 4E-20 91.2 5.8 86 29-114 71-205 (222)
111 2ocw_A Polymeric-immunoglobuli 99.6 2.7E-14 9.3E-19 95.8 12.9 84 30-114 406-545 (585)
112 1q0x_L FAB 9B1, light chain; a 99.6 4.3E-14 1.5E-18 83.9 12.4 108 2-109 33-209 (212)
113 3v2a_R Vascular endothelial gr 99.6 6.5E-17 2.2E-21 111.1 0.0 86 29-114 624-755 (772)
114 1ry7_B FGFR-3, fibroblast grow 99.6 5.9E-16 2E-20 97.4 4.3 106 2-114 39-215 (334)
115 3tv3_L PGT128 light chain, IG 99.6 1.8E-14 6E-19 85.5 10.0 109 2-110 28-206 (211)
116 1cs6_A Axonin-1; neural cell a 99.6 1.1E-14 3.8E-19 93.1 9.7 111 2-114 132-292 (382)
117 2c1o_A IGK-C protein; FAB frag 99.6 6.6E-14 2.3E-18 85.2 12.4 106 2-107 73-247 (254)
118 3qs7_E FL cytokine receptor; i 99.6 7.2E-14 2.5E-18 91.2 12.9 109 2-113 78-226 (423)
119 1bih_A Hemolin; insect immunit 99.6 2E-14 6.8E-19 92.1 9.7 103 2-107 37-192 (395)
120 2v5m_A Dscam; neurobiology SPL 99.6 3.9E-14 1.3E-18 90.6 10.8 110 2-114 136-305 (388)
121 2rcj_C Light chain; immunoglob 99.6 2E-14 7E-19 95.4 9.6 107 3-112 147-313 (523)
122 3p3y_A Neurofascin; IG domains 99.6 3.7E-14 1.3E-18 91.0 10.3 109 2-114 147-310 (404)
123 3sob_L Antibody light chain; b 99.6 1.8E-13 6.1E-18 82.3 12.5 94 18-111 82-232 (237)
124 1lk3_L 9D7 light chain; antige 99.6 1.5E-13 5E-18 81.6 11.7 105 2-106 30-203 (210)
125 2xzc_L FAB A.17 light chain; i 99.6 1.6E-13 5.6E-18 81.7 11.9 110 2-111 32-211 (216)
126 1itb_B Type 1 interleukin-1 re 99.6 3.3E-15 1.1E-19 93.3 4.6 100 2-105 36-189 (315)
127 1c1e_H Catalytic antibody 1E9 99.6 5E-14 1.7E-18 84.1 9.5 93 19-112 66-217 (219)
128 2oz4_A Intercellular adhesion 99.6 2.2E-14 7.6E-19 87.9 8.1 102 1-114 125-263 (265)
129 1z7z_I Intercellular adhesion 99.5 1.3E-14 4.5E-19 94.6 7.4 98 2-114 311-448 (450)
130 1vca_A VCAM-D1,2, human vascul 99.5 2.7E-13 9.3E-18 80.4 12.5 106 2-113 31-195 (202)
131 1nfd_E H57 FAB; complex (immun 99.5 2.4E-14 8.1E-19 85.1 7.9 107 2-108 29-205 (212)
132 1p6f_A NKP46, natural cytotoxi 99.5 2.2E-13 7.7E-18 83.0 12.3 110 2-114 35-190 (242)
133 2pet_A Lutheran blood group gl 99.5 2.3E-14 8E-19 85.8 7.6 84 30-113 77-229 (231)
134 4fom_A Poliovirus receptor-rel 99.5 1.2E-13 4.2E-18 86.0 11.0 79 28-106 72-199 (308)
135 1qgc_4 Protein (immunoglobulin 99.5 2.2E-13 7.5E-18 88.4 12.0 99 3-103 149-321 (438)
136 3s96_B 3B5H10 FAB light chain; 99.5 1.5E-13 5.2E-18 81.7 10.3 91 19-109 64-214 (218)
137 2dru_A Chimera of CD48 antigen 99.5 2.3E-13 7.9E-18 79.5 10.8 82 27-111 66-177 (180)
138 3u83_A Poliovirus receptor-rel 99.5 2.2E-13 7.5E-18 85.5 11.3 86 28-113 90-228 (331)
139 3mjg_X Beta-type platelet-deri 99.5 9.3E-14 3.2E-18 85.8 9.4 76 39-114 150-277 (289)
140 2nzi_A Titin; IG-domain, FNIII 99.5 2.8E-13 9.7E-18 84.2 11.3 104 1-106 133-281 (305)
141 2ghw_B Anti-SARS SCFV antibody 99.5 1.3E-12 4.4E-17 79.2 13.8 86 18-103 67-229 (247)
142 3vh8_G Killer cell immunoglobu 99.5 5.1E-14 1.8E-18 88.2 7.6 98 1-104 51-199 (316)
143 2rcj_C Light chain; immunoglob 99.5 2.4E-13 8.3E-18 90.2 11.1 109 2-110 30-209 (523)
144 1nqb_A Single-chain antibody f 99.5 1.6E-12 5.4E-17 79.6 14.0 84 19-102 66-219 (256)
145 3vh8_G Killer cell immunoglobu 99.5 1.2E-13 4E-18 86.6 9.1 108 2-113 147-311 (316)
146 3d9a_H Heavy chain of hyhel10 99.5 2.2E-13 7.6E-18 80.8 9.8 90 18-108 64-207 (210)
147 2zg1_A Sialic acid-binding IG- 99.5 1.8E-13 6.3E-18 81.2 9.4 85 29-113 81-213 (214)
148 1moe_A Anti-CEA MAB T84.66; an 99.5 9.6E-13 3.3E-17 79.4 12.7 99 2-100 35-219 (240)
149 3esu_F Antibody 14B7* light ch 99.5 1.3E-12 4.6E-17 79.3 13.3 51 2-52 34-96 (250)
150 2j6e_L IGM, FAB light chain; a 99.5 2.4E-13 8E-18 81.8 9.6 108 3-110 52-230 (234)
151 1nkr_A P58-CL42 KIR; inhibitor 99.5 3E-13 1E-17 80.0 9.9 97 2-102 36-184 (201)
152 3r06_A Anti-mouse CD3epsilon a 99.5 4.8E-13 1.6E-17 79.4 10.7 91 18-108 59-206 (213)
153 1f3r_B FV antibody fragment; I 99.5 9.8E-13 3.4E-17 80.4 12.4 85 18-102 64-232 (257)
154 3nl4_L Antigen binding fragmen 99.5 4.3E-13 1.5E-17 79.6 10.5 98 2-99 31-198 (213)
155 3knb_B Obscurin-like protein 1 99.5 1.7E-13 5.8E-18 73.9 7.8 56 1-58 42-97 (107)
156 2p1y_A Bispecific alpha/beta T 99.5 7.5E-13 2.6E-17 79.8 11.4 74 28-101 71-221 (238)
157 3eow_R Poliovirus receptor; im 99.5 1.6E-13 5.3E-18 82.0 8.2 85 28-112 76-209 (221)
158 3knb_A Titin; IG-like, titin, 99.5 2.4E-13 8.1E-18 72.4 8.0 58 1-58 34-91 (100)
159 1qgc_4 Protein (immunoglobulin 99.5 6.6E-13 2.3E-17 86.2 11.4 105 2-106 35-208 (438)
160 3ux9_B SCFV antibody; five hel 99.5 2.6E-12 8.8E-17 78.3 13.4 35 18-52 62-96 (256)
161 3bkj_L WO2 IGG2A FAB fragment 99.5 9.1E-13 3.1E-17 80.3 11.3 105 2-106 69-242 (252)
162 4fqp_A Poliovirus receptor; im 99.5 1E-12 3.6E-17 82.1 11.5 78 29-106 78-204 (313)
163 2lu7_A Obscurin-like protein 1 99.5 3.8E-13 1.3E-17 69.5 7.7 51 1-53 24-74 (84)
164 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 1.8E-12 6.3E-17 77.4 11.8 94 19-113 68-221 (222)
165 1pz5_B Heavy chain of FAB (SYA 99.5 6.8E-13 2.3E-17 79.3 9.9 92 19-111 68-217 (220)
166 3uzq_A Anti-dengue MAB 4E11; d 99.5 2.2E-12 7.5E-17 78.6 12.3 86 19-104 67-232 (253)
167 2yuz_A Myosin-binding protein 99.5 9.4E-13 3.2E-17 70.1 9.0 64 1-66 34-97 (100)
168 3ejj_X Macrophage colony-stimu 99.5 5.8E-13 2E-17 82.1 9.0 105 3-114 31-180 (289)
169 3auv_A SC-DSFV derived from th 99.4 8.3E-12 2.8E-16 77.1 13.6 51 2-52 42-104 (276)
170 3umt_A SCFV heavy chain and li 99.4 1.1E-11 3.7E-16 75.7 13.9 95 19-113 68-243 (256)
171 1b6u_A KIR2DL3, P58 killer cel 99.4 2.9E-12 9.9E-17 78.8 11.3 97 2-102 35-183 (257)
172 3pv7_A B7-H6, IG-like domain-c 99.4 4.7E-12 1.6E-16 76.8 12.1 85 29-113 81-224 (248)
173 3v2a_R Vascular endothelial gr 99.4 1.5E-13 5E-18 94.6 5.8 103 2-106 256-408 (772)
174 2znx_A SCFV; fluorotryptohpan, 99.4 1.8E-11 6.2E-16 74.2 14.4 51 2-52 31-93 (242)
175 2wng_A Tyrosine-protein phosph 99.4 5.2E-12 1.8E-16 79.4 12.1 106 3-110 150-315 (327)
176 2wng_A Tyrosine-protein phosph 99.4 1.9E-12 6.5E-17 81.4 9.9 103 2-104 34-205 (327)
177 2jll_A NCAM2, neural cell adhe 99.4 1.4E-11 4.8E-16 78.8 13.9 105 2-106 130-279 (389)
178 1he7_A High affinity nerve gro 99.4 2.2E-12 7.4E-17 71.3 8.7 60 1-62 29-95 (126)
179 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.4 4E-12 1.4E-16 77.7 10.8 25 80-104 211-235 (256)
180 2cqv_A MLCK, myosin light chai 99.4 3.4E-12 1.2E-16 69.1 9.0 65 1-67 36-102 (114)
181 1waa_A Titin; metal binding pr 99.4 1.2E-12 4.1E-17 68.8 7.0 50 2-53 34-83 (93)
182 1z7z_I Intercellular adhesion 99.4 4.1E-12 1.4E-16 82.8 10.8 107 3-114 120-281 (450)
183 2o26_X MAST/stem cell growth f 99.4 1.8E-12 6.1E-17 80.2 8.5 99 3-113 39-181 (290)
184 3juy_B 3B3 single chain varian 99.4 1.3E-11 4.5E-16 75.3 12.3 34 19-52 72-107 (256)
185 2lvc_A Obscurin-like protein 1 99.4 5E-13 1.7E-17 70.0 5.1 49 2-52 35-83 (91)
186 1mju_H Immunoglobulin MS6-12; 99.4 5.1E-12 1.7E-16 76.1 10.1 94 19-113 66-215 (227)
187 1za6_B IGG heavy chain; immuno 99.4 2.4E-12 8.1E-17 81.6 8.9 87 18-105 65-207 (344)
188 1svz_A Immunoglobulin;, single 99.4 1.7E-11 5.8E-16 74.3 11.9 51 2-52 36-98 (247)
189 3qp3_A Titin; I-SET IG-like, s 99.4 7.3E-12 2.5E-16 66.5 9.0 61 1-63 37-99 (103)
190 1qok_A MFE-23 recombinant anti 99.4 1.6E-11 5.5E-16 76.0 11.6 35 19-53 92-128 (282)
191 2oz4_A Intercellular adhesion 99.4 1.8E-11 6.2E-16 74.9 11.3 102 3-114 37-181 (265)
192 3nl4_H Antigen binding fragmen 99.4 6.4E-12 2.2E-16 74.8 8.9 95 18-113 63-212 (215)
193 3gkz_A Anti-methamphetamine si 99.4 8.1E-11 2.8E-15 71.8 14.0 34 19-52 73-108 (257)
194 2bk8_A Connectin, M1, titin he 99.4 1.4E-11 4.9E-16 64.8 9.2 55 2-58 32-86 (97)
195 3puc_A Titin; I-SET IG-like do 99.4 1.4E-11 4.6E-16 64.9 9.0 55 2-58 36-90 (99)
196 4dkd_C Macrophage colony-stimu 99.3 8.2E-13 2.8E-17 81.5 4.3 87 27-114 48-180 (292)
197 1wwb_X Protein (brain derived 99.3 1.2E-11 4.1E-16 66.0 8.3 60 1-62 30-94 (103)
198 3o3u_N Maltose-binding peripla 99.3 4.8E-12 1.6E-16 85.0 8.1 100 2-104 397-566 (581)
199 3bae_H WO2 IGG2A FAB fragment 99.3 1.4E-11 4.7E-16 74.1 9.0 92 19-111 67-222 (228)
200 2wqr_A IG epsilon chain C regi 99.3 2.6E-12 9E-17 80.8 6.0 101 2-104 41-203 (323)
201 1x44_A Myosin-binding protein 99.3 2.7E-11 9.1E-16 64.5 9.0 63 2-68 36-100 (103)
202 4dzb_B Vbeta2 (MAIT T cell rec 99.3 3.9E-11 1.3E-15 72.6 10.8 86 19-104 65-220 (246)
203 3bqu_C 3H6 FAB light chain; be 99.3 1.6E-12 5.5E-17 78.1 4.4 77 28-104 91-224 (233)
204 1dee_B IGM RF 2A2; FAB-IBP com 99.3 3E-10 1E-14 68.0 14.2 91 19-109 66-221 (223)
205 3irg_B Obscurin-like protein 1 99.3 2.1E-11 7.1E-16 65.1 8.0 55 2-58 43-97 (107)
206 3knb_A Titin; IG-like, titin, 99.3 3E-11 1E-15 64.2 8.3 53 63-115 30-99 (100)
207 1g1c_A Immunoglobulin-like dom 99.3 4.6E-11 1.6E-15 62.9 9.0 56 1-58 34-90 (99)
208 3knb_B Obscurin-like protein 1 99.3 4.1E-11 1.4E-15 64.4 8.7 53 63-115 38-105 (107)
209 1igt_B IGG2A intact antibody - 99.3 4.8E-11 1.6E-15 77.9 10.6 88 19-107 66-211 (444)
210 1wwc_A Protein (NT-3 growth fa 99.3 3E-11 1E-15 65.8 8.2 60 1-62 34-97 (118)
211 1op3_H FAB 2G12, heavy chain; 99.3 3.5E-11 1.2E-15 72.2 9.1 90 18-108 65-218 (225)
212 2fbj_H IGA-kappa J539 FAB (hea 99.3 2.2E-10 7.4E-15 68.6 12.4 88 19-106 66-212 (220)
213 3irg_A Titin; IG-like, titin, 99.3 3.4E-11 1.2E-15 63.4 8.0 58 1-58 34-91 (100)
214 1gxe_A Myosin binding protein 99.3 2.8E-11 9.7E-16 68.0 8.0 43 18-60 91-133 (139)
215 2wqr_A IG epsilon chain C regi 99.3 1.1E-11 3.9E-16 77.9 6.7 100 3-104 148-309 (323)
216 2e7c_A Myosin-binding protein 99.3 7.3E-11 2.5E-15 64.2 8.8 55 1-58 53-107 (118)
217 2gjj_A A21 single-chain antibo 99.3 1.9E-10 6.4E-15 70.7 11.6 51 2-52 41-103 (264)
218 2edf_A Obscurin; beta-sandwich 99.3 5.5E-11 1.9E-15 63.1 7.9 62 2-67 37-98 (103)
219 1dn0_B IGM-kappa cold agglutin 99.2 3.8E-10 1.3E-14 68.1 12.2 96 18-113 64-225 (232)
220 1x9q_A SCFV, 4M5.3 anti-fluore 99.2 1.3E-10 4.5E-15 71.4 10.3 51 2-52 50-112 (268)
221 1nct_A Titin; cell adhesion, g 99.2 1.2E-11 4E-16 66.4 4.9 55 2-58 44-98 (106)
222 3liz_H 4C3 monoclonal antibody 99.2 2.6E-10 8.7E-15 69.6 11.1 93 19-112 66-217 (253)
223 2kdg_A Myotilin; immonoglobuli 99.2 7E-11 2.4E-15 62.3 7.5 56 1-58 34-90 (100)
224 3pl6_D MBP peptide / T-cell re 99.2 2.7E-10 9.3E-15 69.8 11.1 33 19-51 88-121 (268)
225 2xqy_G A13-D6.3 monoclonal ant 99.2 2E-10 6.8E-15 70.6 10.5 90 19-109 72-219 (261)
226 3mjg_X Beta-type platelet-deri 99.2 4.2E-11 1.4E-15 73.9 7.4 106 4-113 28-176 (289)
227 2dlt_A Myosin binding protein 99.2 5.6E-11 1.9E-15 63.5 6.9 57 4-62 39-95 (106)
228 1u2h_A APEG-1, aortic preferen 99.2 6.6E-11 2.2E-15 62.3 7.1 56 1-58 34-90 (99)
229 2edh_A Obscurin; structural ge 99.2 1.7E-10 5.9E-15 62.2 8.8 46 2-49 47-92 (113)
230 2rgs_A I, IG gamma-2B heavy ch 99.2 2.7E-11 9.3E-16 72.4 6.0 101 2-104 45-205 (218)
231 2e6p_A Obscurin-like protein 1 99.2 1.7E-10 5.9E-15 61.3 8.5 59 4-66 41-99 (104)
232 1wit_A Twitchin 18TH IGSF modu 99.2 4.6E-11 1.6E-15 62.4 6.1 55 1-59 31-87 (93)
233 2edk_A Myosin-binding protein 99.2 2.2E-11 7.5E-16 64.6 4.9 48 2-51 37-88 (101)
234 2k1m_A Myosin-binding protein 99.2 1.3E-10 4.6E-15 60.9 7.8 47 2-50 37-83 (95)
235 2yuv_A Myosin-binding protein 99.2 1.7E-10 5.7E-15 61.0 8.2 47 1-49 36-82 (100)
236 1hzh_H IGG, immunoglobulin hea 99.2 1.9E-10 6.6E-15 75.3 10.1 90 18-108 65-222 (457)
237 2vol_A Murine IGG FC; FC, zinc 99.2 1.1E-10 3.8E-15 69.2 8.2 100 3-104 38-197 (207)
238 1igt_B IGG2A intact antibody - 99.2 3.4E-11 1.2E-15 78.6 6.4 103 2-104 274-434 (444)
239 2cpc_A KIAA0657 protein; immun 99.2 1.9E-10 6.5E-15 62.0 8.4 61 2-66 42-102 (113)
240 4hwu_A Fibroblast growth facto 99.2 1.2E-10 4.1E-15 61.0 7.3 53 1-59 28-80 (95)
241 1pd6_A Cardiac MYBP-C;, myosin 99.2 1.1E-10 3.8E-15 62.4 7.1 48 2-51 45-93 (104)
242 1igy_B IGG1 intact antibody MA 99.2 9.1E-12 3.1E-16 81.1 3.4 77 29-106 77-206 (434)
243 1wit_A Twitchin 18TH IGSF modu 99.2 1.4E-10 4.6E-15 60.6 7.2 52 63-114 27-93 (93)
244 3q5y_A TCR N15 beta; IG, T cel 99.2 5.6E-10 1.9E-14 67.3 10.7 32 19-50 63-95 (240)
245 2kkq_A Myotilin; unknown funct 99.2 1.9E-10 6.5E-15 62.5 7.7 66 1-67 44-112 (116)
246 2eo1_A OBSCN protein, cDNA FLJ 99.2 2E-10 6.8E-15 60.9 7.6 48 2-51 40-87 (102)
247 2ckn_A Basic fibroblast growth 99.2 6E-11 2.1E-15 62.2 5.3 51 2-58 38-88 (95)
248 2eny_A Obscurin; beta-sandwich 99.2 2.3E-11 7.7E-16 65.1 3.7 58 3-64 40-97 (104)
249 2yr3_A Myosin light chain kina 99.2 2E-10 7E-15 60.4 7.4 53 1-58 40-92 (99)
250 2dku_A KIAA1556 protein; beta- 99.2 5.5E-10 1.9E-14 59.2 8.9 62 2-67 37-98 (103)
251 1gxe_A Myosin binding protein 99.2 3.1E-10 1.1E-14 63.7 8.3 37 79-115 103-139 (139)
252 3omz_A Human vdelta1 gamma del 99.2 3.8E-10 1.3E-14 68.9 9.3 26 28-53 77-102 (259)
253 3bn9_D E2 FAB heavy chain; ant 99.2 3.5E-10 1.2E-14 69.5 9.1 35 19-53 66-102 (257)
254 2dm2_A Palladin; beta-sandwich 99.2 2.2E-10 7.6E-15 61.5 7.4 64 2-66 38-104 (110)
255 3m8o_H Immunoglobulin A1 heavy 99.2 3E-09 1E-13 63.4 12.9 88 19-106 68-214 (221)
256 2cr3_A Basic fibroblast growth 99.1 1.6E-10 5.6E-15 61.0 6.5 55 2-62 32-86 (99)
257 4ei6_B Vbeta16 XV19 type II na 99.1 7.3E-10 2.5E-14 67.0 10.2 33 19-51 64-97 (245)
258 3kvq_A Vascular endothelial gr 99.1 1.2E-10 4.1E-15 62.2 6.0 61 2-66 40-102 (108)
259 2dm3_A KIAA0992 protein, palla 99.1 7.8E-11 2.7E-15 63.2 5.2 64 2-67 39-105 (110)
260 3cx2_A Myosin-binding protein 99.1 6.4E-10 2.2E-14 59.6 8.7 38 78-115 71-108 (108)
261 1wwb_X Protein (brain derived 99.1 3.3E-10 1.1E-14 60.3 7.5 54 61-114 24-97 (103)
262 1fhg_A Telokin; immunoglobulin 99.1 5.6E-10 1.9E-14 63.5 8.6 61 1-63 70-133 (154)
263 3rbs_A Myomesin-1; immunoglobu 99.1 1.5E-10 5.1E-15 68.9 6.3 58 1-62 146-203 (207)
264 1c5d_H Monoclonal antibody aga 99.1 6.9E-10 2.4E-14 66.1 9.0 34 19-52 65-100 (215)
265 1g1c_A Immunoglobulin-like dom 99.1 1.1E-09 3.7E-14 57.5 8.7 63 39-114 19-97 (99)
266 3qhz_H Human monoclonal antibo 99.1 1.2E-09 4.1E-14 65.7 10.0 95 19-114 70-228 (232)
267 1he7_A High affinity nerve gro 99.1 5E-10 1.7E-14 61.8 7.5 54 61-114 23-98 (126)
268 2e6q_A Obscurin-like protein 1 99.1 3.9E-10 1.3E-14 61.1 7.0 63 1-66 35-107 (112)
269 3nfj_J T cell receptor beta ch 99.1 2.9E-09 1E-13 64.3 11.5 33 19-51 62-95 (245)
270 2cqv_A MLCK, myosin light chai 99.1 1.4E-09 4.8E-14 58.7 9.1 62 40-114 22-98 (114)
271 3fku_X Neutralizing antibody F 99.1 9.8E-10 3.4E-14 68.0 9.6 34 19-52 66-101 (280)
272 2edn_A Myosin-binding protein 99.1 3.6E-10 1.2E-14 61.8 6.6 58 1-58 44-108 (118)
273 2kdg_A Myotilin; immonoglobuli 99.1 1.1E-09 3.9E-14 57.5 8.4 62 40-114 20-97 (100)
274 2e7c_A Myosin-binding protein 99.1 1.6E-09 5.3E-14 58.9 9.2 53 63-115 49-115 (118)
275 1u2h_A APEG-1, aortic preferen 99.1 1.3E-09 4.5E-14 57.2 8.6 64 39-115 19-98 (99)
276 2dm7_A KIAA1556 protein; beta- 99.1 1.8E-10 6.3E-15 61.6 5.3 59 2-64 36-94 (108)
277 3bfo_A Mucosa-associated lymph 99.1 3.8E-10 1.3E-14 58.6 6.1 46 1-57 32-77 (91)
278 2gki_A Nuclease; anti-DNA anti 99.1 8.5E-10 2.9E-14 68.6 8.6 25 28-52 99-123 (291)
279 3caf_A Fibroblast growth facto 99.1 1.3E-10 4.6E-15 61.2 4.3 56 1-58 37-93 (100)
280 1iga_A IGA1; immunoglobulin; N 99.1 3.1E-09 1E-13 70.0 11.5 77 28-104 78-215 (475)
281 2yr3_A Myosin light chain kina 99.1 1E-09 3.5E-14 57.7 7.7 63 39-114 25-99 (99)
282 2edj_A Roundabout homolog 2; K 99.1 5.6E-10 1.9E-14 58.8 6.6 53 2-58 38-90 (100)
283 3qp3_A Titin; I-SET IG-like, s 99.1 1.9E-09 6.6E-14 57.0 8.8 63 39-114 22-99 (103)
284 2dav_A SLOW MYBP-C, myosin-bin 99.1 6.1E-10 2.1E-14 61.5 6.7 64 1-64 39-111 (126)
285 2r15_A Myomesin-1; sarcomeric 99.1 1.7E-09 5.7E-14 63.8 9.1 57 1-59 146-203 (212)
286 1hxm_B Gamma-delta T-cell rece 99.1 6.5E-09 2.2E-13 62.9 11.9 35 18-52 66-102 (242)
287 2a38_A Titin; Z1Z2, structural 99.1 1.4E-09 4.7E-14 63.3 8.6 57 1-59 132-188 (194)
288 2bk8_A Connectin, M1, titin he 99.1 3.4E-09 1.2E-13 55.5 9.1 39 76-114 55-93 (97)
289 3qib_D 2B4 beta chain; IG doma 99.0 1.3E-09 4.3E-14 66.9 8.2 24 28-51 99-122 (270)
290 3n9g_H FAB fragment of MAB CR4 99.0 1E-08 3.4E-13 61.7 11.5 93 19-114 66-224 (230)
291 2eo9_A Roundabout homolog 1; b 99.0 1.1E-09 3.9E-14 59.4 6.6 61 2-66 38-100 (118)
292 3irg_A Titin; IG-like, titin, 99.0 3E-09 1E-13 55.8 8.0 37 78-114 62-98 (100)
293 2j8h_A Titin, connectin; cardi 99.0 1.4E-09 4.9E-14 63.5 7.4 57 1-59 133-190 (197)
294 3cx2_A Myosin-binding protein 99.0 2.6E-09 8.8E-14 57.2 7.8 57 2-58 37-100 (108)
295 3irg_B Obscurin-like protein 1 99.0 3.1E-09 1.1E-13 56.5 8.0 53 63-115 38-105 (107)
296 2e7b_A Obscurin; IG-like domai 99.0 1.8E-09 6.3E-14 57.1 7.0 45 4-50 39-83 (103)
297 2dav_A SLOW MYBP-C, myosin-bin 99.0 4.4E-09 1.5E-13 58.1 8.6 37 78-114 74-110 (126)
298 3uto_A Twitchin; kinase, muscl 99.0 2.5E-09 8.4E-14 72.4 9.0 58 1-60 511-568 (573)
299 3puc_A Titin; I-SET IG-like do 99.0 6E-09 2.1E-13 54.6 8.7 38 77-114 60-97 (99)
300 3s35_X Vascular endothelial gr 99.0 5.1E-09 1.7E-13 57.0 8.5 36 79-114 74-109 (122)
301 1wwc_A Protein (NT-3 growth fa 99.0 1.3E-09 4.3E-14 59.2 6.0 52 63-114 30-100 (118)
302 2w59_A IGY FCU3-4; immunoglobu 99.0 7.2E-10 2.5E-14 66.8 5.3 49 3-53 47-100 (231)
303 2edj_A Roundabout homolog 2; K 99.0 2.1E-09 7.3E-14 56.6 6.5 53 63-115 33-98 (100)
304 3shs_A HOC head outer capsid p 99.0 1.4E-08 4.7E-13 62.7 10.8 90 3-104 37-170 (304)
305 3caf_A Fibroblast growth facto 99.0 3.4E-09 1.2E-13 55.7 7.1 52 63-114 33-100 (100)
306 1gl4_B Basement membrane-speci 99.0 7.4E-09 2.5E-13 54.3 8.3 65 38-114 23-97 (98)
307 3so5_A LIG-3, leucine-rich rep 99.0 2.7E-09 9.4E-14 56.8 6.6 53 2-56 42-102 (112)
308 2ens_A Advanced glycosylation 99.0 9.5E-10 3.3E-14 57.6 4.7 42 2-54 40-81 (96)
309 2v5y_A Receptor-type tyrosine- 99.0 1.1E-08 3.6E-13 70.8 11.1 112 1-114 105-259 (731)
310 3bfo_A Mucosa-associated lymph 99.0 3.7E-09 1.3E-13 54.8 6.9 63 39-114 17-86 (91)
311 1iga_A IGA1; immunoglobulin; N 99.0 4.1E-09 1.4E-13 69.5 8.6 32 80-111 310-341 (475)
312 2wbj_D OB TCR; transmembrane, 99.0 2E-08 6.9E-13 62.0 11.2 33 19-51 88-121 (279)
313 3lcy_A Titin; A-BAND, IG tande 99.0 4.3E-09 1.5E-13 61.2 7.7 57 1-59 132-189 (197)
314 2yd6_A PTPRD protein; hydrolas 99.0 5.5E-09 1.9E-13 61.9 8.3 58 1-58 137-195 (212)
315 2cr6_A KIAA1556 protein, obscu 99.0 5.9E-10 2E-14 60.4 3.7 60 2-65 43-103 (115)
316 3sob_H Antibody heavy chain, l 99.0 3.4E-08 1.2E-12 60.3 11.9 33 80-113 217-249 (256)
317 3tv3_H PGT128 heavy chain, IG 98.9 1.5E-08 5.2E-13 61.3 10.0 34 80-114 203-236 (239)
318 1i1c_A IGG2A, IG gamma-2A chai 98.9 5.8E-09 2E-13 63.3 8.1 51 3-54 52-106 (239)
319 2edn_A Myosin-binding protein 98.9 2.6E-09 8.8E-14 58.4 5.9 38 78-115 79-116 (118)
320 1nct_A Titin; cell adhesion, g 98.9 1.7E-09 5.8E-14 57.8 4.9 38 77-114 68-105 (106)
321 2kkq_A Myotilin; unknown funct 98.9 6.9E-09 2.4E-13 56.3 7.4 35 80-114 74-108 (116)
322 3kvq_A Vascular endothelial gr 98.9 6.1E-09 2.1E-13 55.4 6.9 52 63-114 35-99 (108)
323 2dm2_A Palladin; beta-sandwich 98.9 5.1E-09 1.7E-13 56.0 6.5 36 79-114 66-101 (110)
324 2v5t_A NCAM2, N-CAM 2, neural 98.9 6.1E-09 2.1E-13 60.2 7.2 53 2-58 128-180 (189)
325 1fhg_A Telokin; immunoglobulin 98.9 1.5E-08 5.3E-13 57.4 8.7 53 62-114 65-133 (154)
326 2wv3_A Neuroplastin; igcam, me 98.9 2.5E-08 8.6E-13 57.9 9.7 58 1-58 121-182 (190)
327 1gl4_B Basement membrane-speci 98.9 3.5E-09 1.2E-13 55.6 5.2 50 2-58 41-90 (98)
328 1l6x_A Immunoglobulin gamma-1 98.9 6.7E-09 2.3E-13 61.4 7.0 100 3-104 38-197 (207)
329 3b5h_A Cervical EMMPRIN, HAB18 98.9 2.6E-08 8.7E-13 57.6 9.3 57 2-58 114-175 (184)
330 1ypz_E T cell receptor delta, 98.9 8.2E-09 2.8E-13 61.3 7.2 35 18-52 56-93 (207)
331 3r4d_A CEA-related cell adhesi 98.9 6E-09 2.1E-13 61.2 6.6 57 2-62 139-196 (208)
332 2ckn_A Basic fibroblast growth 98.9 8.4E-09 2.9E-13 53.9 6.2 61 39-113 23-94 (95)
333 2cr3_A Basic fibroblast growth 98.9 1.2E-08 4.2E-13 53.7 6.9 36 79-114 54-89 (99)
334 3u2s_H PG9 heavy chain; greek 98.9 4.6E-08 1.6E-12 59.6 10.3 34 18-51 64-99 (248)
335 1jbj_A CD3 epsilon and gamma e 98.9 1.8E-09 6.3E-14 63.0 4.0 47 1-56 133-179 (186)
336 2dm3_A KIAA0992 protein, palla 98.9 2.5E-09 8.7E-14 57.2 4.1 36 79-114 66-101 (110)
337 3to4_D NKT vbeta2 (mouse varia 98.9 2.6E-08 9E-13 60.6 9.1 21 32-52 76-96 (253)
338 3m45_A Cell adhesion molecule 98.9 2.5E-08 8.4E-13 52.9 7.8 56 2-58 36-98 (108)
339 3r08_E T-cell surface glycopro 98.9 9.5E-10 3.3E-14 56.3 2.0 39 2-51 27-66 (82)
340 1bec_A 14.3.D T cell antigen r 98.8 5.1E-08 1.8E-12 58.8 9.8 26 27-52 69-94 (238)
341 2ifg_A High affinity nerve gro 98.8 2E-08 6.9E-13 63.8 8.3 60 1-62 275-341 (347)
342 2cry_A KIN of IRRE-like protei 98.8 1.4E-09 4.8E-14 59.4 2.7 60 2-61 43-108 (122)
343 3m45_A Cell adhesion molecule 98.8 3.6E-08 1.2E-12 52.3 7.9 37 77-114 69-105 (108)
344 3rbg_A Cytotoxic and regulator 98.8 2.2E-08 7.4E-13 54.8 7.2 68 2-70 31-107 (124)
345 3mlr_H Human monoclonal anti-H 98.8 6.8E-08 2.3E-12 57.9 9.9 32 80-112 192-223 (226)
346 2eo9_A Roundabout homolog 1; b 98.8 9E-09 3.1E-13 55.8 5.5 52 63-114 33-97 (118)
347 1hzh_H IGG, immunoglobulin hea 98.8 1.7E-08 5.7E-13 66.2 7.7 99 3-104 284-443 (457)
348 1igy_B IGG1 intact antibody MA 98.8 1E-10 3.5E-15 76.2 -3.1 102 3-104 265-424 (434)
349 3s35_X Vascular endothelial gr 98.8 1.4E-08 4.9E-13 55.2 6.0 64 2-65 40-111 (122)
350 3iu4_H CHP3 FAB heavy chain; a 98.8 4E-08 1.4E-12 60.4 8.6 34 19-52 65-100 (263)
351 3qr2_A Basigin; CD147, EMMPRIN 98.8 8.6E-08 2.9E-12 53.2 9.0 28 78-105 89-116 (137)
352 2v9t_A Roundabout homolog 1; s 98.8 2E-08 7E-13 54.2 6.1 57 1-58 38-100 (117)
353 1f2q_A High affinity immunoglo 98.8 1.7E-08 5.7E-13 58.2 6.1 55 2-66 116-173 (176)
354 1ypz_F T-cell receptor gamma c 98.8 9.1E-08 3.1E-12 57.5 9.4 25 28-52 77-101 (230)
355 1za6_B IGG heavy chain; immuno 98.8 1.1E-08 3.9E-13 64.7 5.6 47 2-54 152-205 (344)
356 2aty_A Complement receptor chi 98.8 5.9E-08 2E-12 62.4 8.8 102 3-104 203-362 (376)
357 2va4_A NCAM2, N-CAM 2, neural 98.8 1.5E-07 5.1E-12 54.4 9.7 59 1-59 123-186 (192)
358 1ugn_A LIR1, leukocyte immunog 98.8 3.1E-08 1.1E-12 58.0 6.7 52 1-54 128-181 (198)
359 2ny1_B T-cell surface glycopro 98.8 8.1E-09 2.8E-13 59.8 4.0 55 1-67 126-182 (184)
360 2iep_A Muscle-specific kinase 98.8 2.9E-08 1E-12 57.5 6.4 52 2-58 130-181 (192)
361 4hwu_A Fibroblast growth facto 98.7 5.2E-08 1.8E-12 50.7 6.7 36 79-114 51-86 (95)
362 2vr9_A Roundabout 1, ROBO; imm 98.7 6.7E-08 2.3E-12 57.1 7.9 55 1-58 138-198 (217)
363 1gsm_A Madcam-1, mucosal addre 98.7 2.5E-07 8.4E-12 55.3 10.2 49 3-58 39-87 (210)
364 1z9m_A GAPA225; nectin-like, I 98.7 4.7E-08 1.6E-12 54.9 6.7 62 2-67 68-141 (145)
365 3s97_C Contactin-1; carbonic a 98.7 2.6E-08 8.8E-13 58.0 5.7 52 1-58 142-193 (201)
366 1oga_E TRBC1, T-cell receptor 98.7 1.2E-07 4.2E-12 57.6 8.6 25 28-52 74-98 (252)
367 2xot_A Amphoterin-induced prot 98.7 2.9E-08 1E-12 63.5 6.1 59 1-63 274-336 (361)
368 3so5_A LIG-3, leucine-rich rep 98.7 1.1E-07 3.8E-12 50.4 7.5 35 79-113 76-111 (112)
369 2v44_A NCAM2, neural cell adhe 98.7 3.3E-08 1.1E-12 57.3 5.8 53 2-57 126-178 (189)
370 2yd1_A Tyrosine-protein phosph 98.7 7.4E-08 2.5E-12 56.9 6.9 57 2-63 140-199 (212)
371 3rbg_A Cytotoxic and regulator 98.7 1.4E-07 4.6E-12 51.6 7.5 39 75-114 62-100 (124)
372 3mtr_A N-CAM-1, NCAM-1, neural 98.7 2.4E-07 8.2E-12 54.8 8.9 52 63-114 43-111 (215)
373 3k0w_A Mucosa-associated lymph 98.7 5.3E-08 1.8E-12 57.9 6.1 52 1-63 147-201 (218)
374 1f97_A Junction adhesion molec 98.7 2.9E-08 9.8E-13 58.3 4.8 54 1-56 134-195 (212)
375 2ens_A Advanced glycosylation 98.7 2.9E-08 9.9E-13 51.9 4.3 52 63-114 35-94 (96)
376 2lu7_A Obscurin-like protein 1 98.7 8.7E-08 3E-12 49.1 5.9 39 72-114 44-82 (84)
377 1epf_A NCAM, protein (neural c 98.7 6.1E-08 2.1E-12 56.2 5.9 53 1-56 129-181 (191)
378 2c1o_A IGK-C protein; FAB frag 98.7 5.1E-08 1.7E-12 59.1 5.7 25 80-104 114-138 (254)
379 2v9r_A Roundabout homolog 1; p 98.7 1.1E-07 3.9E-12 55.8 7.0 59 1-64 141-202 (212)
380 2cry_A KIN of IRRE-like protei 98.7 8.8E-09 3E-13 56.2 2.1 37 78-114 75-112 (122)
381 3ry4_A Low affinity immunoglob 98.7 4.1E-08 1.4E-12 56.0 4.9 46 2-57 116-161 (170)
382 1sy6_A T-cell surface glycopro 98.7 2.5E-08 8.7E-13 59.0 4.1 52 2-56 141-193 (204)
383 3khq_A B-cell antigen receptor 98.6 2E-07 6.8E-12 51.8 7.3 64 2-66 45-119 (133)
384 2id5_A Lingo-1, leucine rich r 98.6 3.7E-08 1.3E-12 64.9 5.0 55 1-58 414-469 (477)
385 3qr2_A Basigin; CD147, EMMPRIN 98.6 3.2E-08 1.1E-12 55.0 4.1 57 1-57 50-117 (137)
386 4acp_A IG gamma-1 chain C regi 98.6 3.5E-08 1.2E-12 60.0 4.5 102 3-104 59-218 (240)
387 4frw_A Poliovirus receptor-rel 98.6 1.6E-08 5.5E-13 59.4 2.8 56 1-58 147-203 (218)
388 1hng_A CD2; T lymphocyte adhes 98.6 2E-08 6.9E-13 58.1 3.1 44 2-58 125-168 (176)
389 1xau_A B- and T-lymphocyte att 98.6 2.8E-07 9.5E-12 49.3 7.1 58 1-58 44-107 (122)
390 2yuz_A Myosin-binding protein 98.6 1.7E-07 5.8E-12 49.5 6.4 71 39-114 21-94 (100)
391 3sgj_C Human FCG3A receptor; r 98.6 3.4E-08 1.2E-12 58.5 3.9 55 2-66 119-176 (204)
392 1fnl_A Low affinity immunoglob 98.6 3E-08 1E-12 57.1 3.6 44 2-55 119-162 (175)
393 1jhl_L IGG1-kappa D11.15 FV (l 98.6 8.2E-07 2.8E-11 47.3 8.9 52 2-53 31-94 (108)
394 3zyj_A Leucine-rich repeat-con 98.6 6.8E-08 2.3E-12 63.2 5.4 65 1-68 369-437 (440)
395 1zvo_C Myeloma immunoglobulin 98.6 1.4E-06 4.9E-11 58.1 11.8 52 3-54 330-385 (512)
396 1zvo_C Myeloma immunoglobulin 98.6 1.5E-06 5.1E-11 58.0 11.6 34 19-52 67-102 (512)
397 1vca_A VCAM-D1,2, human vascul 98.6 7.6E-07 2.6E-11 52.5 9.2 63 39-114 15-89 (202)
398 1waa_A Titin; metal binding pr 98.6 4.1E-07 1.4E-11 47.4 7.0 71 38-114 18-91 (93)
399 4fa8_A Secreted protein BARF1; 98.6 3.1E-07 1.1E-11 54.4 7.2 45 70-114 60-104 (203)
400 2x1w_L Vascular endothelial gr 98.6 8.8E-08 3E-12 56.8 4.7 58 3-62 138-205 (213)
401 2id5_A Lingo-1, leucine rich r 98.6 1.6E-07 5.3E-12 62.0 6.2 53 63-115 410-477 (477)
402 2lvc_A Obscurin-like protein 1 98.6 4.9E-07 1.7E-11 47.0 6.9 62 39-102 20-84 (91)
403 2fbo_J V1V2;, variable region- 98.6 2E-07 6.9E-12 56.1 6.2 53 1-55 165-238 (250)
404 3uto_A Twitchin; kinase, muscl 98.5 5.9E-07 2E-11 60.9 8.9 56 59-114 503-573 (573)
405 3p2t_A Leukocyte immunoglobuli 98.5 9.5E-08 3.2E-12 55.9 4.5 51 2-54 128-179 (196)
406 2c5d_C AXL oncogene, tyrosine- 98.5 3.6E-07 1.2E-11 53.1 6.5 47 2-57 136-183 (195)
407 4f80_A Butyrophilin subfamily 98.5 1.1E-07 3.7E-12 56.7 4.3 61 1-62 148-209 (226)
408 4gos_A V-SET domain-containing 98.5 1.2E-07 4.1E-12 52.1 4.1 36 78-113 83-118 (125)
409 1nbq_A JAM, junctional adhesio 98.5 4.2E-08 1.4E-12 57.4 2.1 53 2-56 138-197 (209)
410 3grw_A Fibroblast growth facto 98.5 4.3E-07 1.5E-11 54.4 6.3 67 2-68 144-222 (241)
411 1xau_A B- and T-lymphocyte att 98.5 3.1E-06 1.1E-10 45.3 8.7 37 78-114 78-115 (122)
412 2qsq_A Carcinoembryonic antige 98.5 4E-07 1.4E-11 49.1 5.4 27 28-54 70-96 (111)
413 2v9t_A Roundabout homolog 1; s 98.5 1.9E-07 6.4E-12 50.4 4.1 62 39-113 23-107 (117)
414 3zyi_A Leucine-rich repeat-con 98.5 1.7E-07 5.7E-12 61.6 4.6 61 1-64 379-443 (452)
415 1z9m_A GAPA225; nectin-like, I 98.5 2E-06 6.8E-11 48.1 8.4 36 78-114 102-137 (145)
416 2k1m_A Myosin-binding protein 98.4 1.7E-06 6E-11 44.9 7.3 43 69-115 53-95 (95)
417 1hxm_A Gamma-delta T-cell rece 98.4 1.9E-06 6.5E-11 52.0 8.4 35 18-52 61-97 (229)
418 3jz7_A MCAR, CAR, coxsackievir 98.4 2.1E-07 7.1E-12 54.6 4.0 55 2-62 152-208 (214)
419 2d3v_A Leukocyte immunoglobuli 98.4 5.3E-08 1.8E-12 57.0 1.4 50 2-53 128-179 (196)
420 3zyj_A Leucine-rich repeat-con 98.4 4.1E-07 1.4E-11 59.6 5.7 51 64-114 366-432 (440)
421 1eaj_A Coxsackie virus and ade 98.4 6.2E-07 2.1E-11 48.4 5.6 30 29-58 88-117 (126)
422 1rhf_A Tyrosine-protein kinase 98.4 7.5E-07 2.6E-11 51.2 6.2 45 2-57 128-173 (182)
423 2xot_A Amphoterin-induced prot 98.4 8.6E-07 2.9E-11 56.7 6.9 51 63-114 271-336 (361)
424 2gi7_A GPVI protein; IG-like d 98.4 2.9E-07 9.9E-12 53.4 4.2 46 2-53 122-167 (184)
425 1dr9_A B7-1 (CD80), T lymphocy 98.4 1E-06 3.4E-11 51.5 6.6 58 1-61 136-196 (201)
426 1oll_A NK receptor; immune sys 98.4 2.8E-07 9.6E-12 53.6 4.1 46 2-53 127-172 (188)
427 2q20_A VK1 O18/O8 germline lig 98.4 1.9E-06 6.5E-11 45.9 7.1 51 2-52 33-95 (109)
428 2ghw_B Anti-SARS SCFV antibody 98.4 1.1E-06 3.8E-11 53.0 6.8 52 2-53 165-228 (247)
429 1pko_A Myelin oligodendrocyte 98.4 1.5E-06 5.3E-11 48.2 6.8 35 29-63 84-120 (139)
430 3ojm_B Fibroblast growth facto 98.4 1.4E-06 4.9E-11 51.6 6.9 52 63-114 44-111 (231)
431 1nqb_A Single-chain antibody f 98.4 2.4E-06 8.1E-11 52.1 7.9 51 2-52 156-218 (256)
432 2dlt_A Myosin binding protein 98.4 8.7E-07 3E-11 46.9 5.2 37 69-105 53-89 (106)
433 4gjt_B Poliovirus receptor-rel 98.4 5.5E-07 1.9E-11 49.2 4.5 38 78-115 79-117 (123)
434 2edf_A Obscurin; beta-sandwich 98.4 2.6E-06 8.9E-11 44.7 7.0 71 38-114 21-94 (103)
435 2if7_A SLAM family member 6; N 98.4 8.5E-07 2.9E-11 51.9 5.5 45 2-59 140-185 (193)
436 2v5y_A Receptor-type tyrosine- 98.4 1.4E-06 4.8E-11 60.3 7.3 103 2-106 194-345 (731)
437 3udw_C Poliovirus receptor; PV 98.4 7.1E-07 2.4E-11 47.8 4.7 29 29-57 78-107 (118)
438 1x44_A Myosin-binding protein 98.4 3E-06 1E-10 44.6 7.1 42 69-114 54-95 (103)
439 1i8k_A Epidermal growth factor 98.3 3.5E-06 1.2E-10 44.8 7.1 51 2-52 31-93 (107)
440 1mqk_L Antibody 7E2 FV fragmen 98.3 1.7E-06 5.9E-11 47.0 5.9 51 2-52 31-93 (120)
441 4hwn_A FC receptor-like A; FCR 98.3 7.3E-07 2.5E-11 47.7 4.3 41 3-53 43-83 (108)
442 3u1s_H FAB PGT145 heavy chain; 98.3 1.6E-06 5.5E-11 53.3 6.3 33 80-113 231-263 (267)
443 1eaj_A Coxsackie virus and ade 98.3 9.9E-07 3.4E-11 47.6 4.8 37 78-114 88-124 (126)
444 1uct_A Immunoglobulin alpha FC 98.3 4.7E-07 1.6E-11 54.1 3.8 46 2-53 135-180 (218)
445 3zyi_A Leucine-rich repeat-con 98.3 8.6E-07 2.9E-11 58.2 5.3 50 65-114 377-442 (452)
446 2yuv_A Myosin-binding protein 98.3 5.1E-06 1.7E-10 43.4 7.3 42 69-114 53-94 (100)
447 1pko_A Myelin oligodendrocyte 98.3 1.4E-06 4.8E-11 48.3 5.4 38 77-114 83-120 (139)
448 2e27_L Anti-ciguatoxin antibod 98.3 4.5E-06 1.6E-10 45.3 7.2 51 2-52 33-95 (119)
449 1qfw_M FV, antibody (anti beta 98.3 2.1E-06 7.3E-11 45.7 5.8 51 2-52 31-93 (108)
450 3juy_B 3B3 single chain varian 98.3 2.8E-06 9.5E-11 51.6 7.0 52 2-53 180-243 (256)
451 3mj8_L Stimulatory hamster ant 98.3 3.9E-06 1.3E-10 49.4 7.4 46 69-114 60-108 (213)
452 1xiw_B T-cell surface glycopro 98.3 3.2E-07 1.1E-11 46.5 2.2 50 2-62 18-67 (79)
453 3umt_A SCFV heavy chain and li 98.3 3.1E-06 1.1E-10 51.4 7.1 52 2-53 168-231 (256)
454 2vsd_A CHIR AB1; immune system 98.3 1.8E-06 6.1E-11 45.9 5.3 46 2-52 33-78 (105)
455 2coq_A NEW antigen receptor va 98.3 2.5E-06 8.7E-11 45.4 6.0 48 2-51 32-87 (108)
456 4i0k_A CD276 antigen; immunogl 98.3 1.3E-06 4.5E-11 51.7 5.3 62 2-65 141-207 (222)
457 2pet_A Lutheran blood group gl 98.3 1.3E-06 4.5E-11 51.9 5.3 52 1-52 149-211 (231)
458 2edh_A Obscurin; structural ge 98.3 7.3E-06 2.5E-10 43.7 7.8 70 38-114 32-104 (113)
459 1qok_A MFE-23 recombinant anti 98.3 3.7E-06 1.3E-10 51.9 7.4 51 2-52 191-253 (282)
460 1i1r_A GP130, interleukin-6 re 98.3 4.1E-05 1.4E-09 47.6 12.1 46 2-52 41-86 (303)
461 1j05_L T84.66 antibody, anti-C 98.3 2.4E-06 8.3E-11 45.6 5.8 51 2-52 35-97 (111)
462 2ywz_A NEW antigen receptor va 98.3 3.5E-06 1.2E-10 45.1 6.4 48 2-51 32-87 (111)
463 2or8_A Hepatitis A virus cellu 98.3 1.4E-06 4.8E-11 46.8 4.8 25 29-53 72-96 (116)
464 2cpc_A KIAA0657 protein; immun 98.3 5.6E-06 1.9E-10 44.1 7.0 70 39-114 27-99 (113)
465 3q0h_A T cell immunoreceptor w 98.3 4.4E-06 1.5E-10 45.2 6.6 62 3-67 36-111 (117)
466 3bp6_B Programmed cell death 1 98.3 5.9E-06 2E-10 48.2 7.5 37 78-114 66-102 (202)
467 3uzq_A Anti-dengue MAB 4E11; d 98.3 2.2E-06 7.7E-11 51.9 5.8 35 19-53 196-230 (253)
468 2eny_A Obscurin; beta-sandwich 98.3 5.1E-06 1.7E-10 44.0 6.6 72 39-114 22-96 (104)
469 2qsq_A Carcinoembryonic antige 98.3 1.5E-06 5.3E-11 46.8 4.5 36 79-114 72-108 (111)
470 2cr6_A KIAA1556 protein, obscu 98.3 2.8E-06 9.5E-11 45.7 5.5 48 63-114 38-101 (115)
471 1f3r_B FV antibody fragment; I 98.2 2.3E-06 7.9E-11 52.1 5.6 52 2-53 169-232 (257)
472 3kg5_A B-cell antigen receptor 98.2 1.6E-05 5.6E-10 44.1 8.6 67 2-68 47-123 (134)
473 2oyp_A Hepatitis A virus cellu 98.2 7.9E-07 2.7E-11 47.1 3.0 27 29-55 71-97 (109)
474 1nfd_E H57 FAB; complex (immun 98.2 2.1E-07 7.2E-12 54.9 0.8 52 2-55 145-201 (212)
475 4ffy_L DENV1-E111 single chain 98.2 6.8E-06 2.3E-10 45.0 6.8 35 18-52 63-97 (126)
476 1i3g_L Antibody FV fragment; a 98.2 7.4E-06 2.5E-10 43.8 6.8 51 2-52 34-96 (111)
477 1pew_A JTO2, A lambda-6 type i 98.2 1.8E-06 6.2E-11 46.0 4.3 51 2-52 32-94 (109)
478 1h5b_A Murine T cell receptor 98.2 2.8E-06 9.5E-11 45.6 5.0 26 28-53 69-94 (113)
479 2e6p_A Obscurin-like protein 1 98.2 6.8E-06 2.3E-10 43.2 6.4 31 73-103 59-89 (104)
480 2dru_A Chimera of CD48 antigen 98.2 1.6E-06 5.4E-11 50.4 4.1 45 1-58 129-173 (180)
481 3udw_C Poliovirus receptor; PV 98.2 2.3E-06 7.9E-11 45.8 4.5 37 78-114 78-115 (118)
482 3s96_B 3B5H10 FAB light chain; 98.2 8.6E-06 2.9E-10 48.0 7.3 35 69-103 65-99 (218)
483 1eeq_A Kappa-4 immunoglobulin 98.2 9.6E-06 3.3E-10 43.5 6.8 51 2-52 37-99 (114)
484 1xt5_A Variable region-contain 98.2 1.7E-06 5.8E-11 47.6 3.8 25 29-53 91-115 (135)
485 1pd6_A Cardiac MYBP-C;, myosin 98.2 9.1E-06 3.1E-10 43.0 6.4 72 38-115 29-104 (104)
486 3khq_A B-cell antigen receptor 98.2 6.2E-06 2.1E-10 45.7 5.8 66 37-103 29-101 (133)
487 2oyp_A Hepatitis A virus cellu 98.2 3.2E-06 1.1E-10 44.7 4.4 36 78-113 71-106 (109)
488 1zox_A CLM-1; IG-superfamily, 98.2 6.1E-06 2.1E-10 44.1 5.5 47 68-114 61-109 (113)
489 1p6f_A NKP46, natural cytotoxi 98.2 3E-06 1E-10 51.5 4.7 57 2-64 130-191 (242)
490 1ccz_A Protein (CD58); LFA-3, 98.2 1.5E-06 5E-11 50.1 3.2 45 1-58 119-163 (171)
491 3nl4_L Antigen binding fragmen 98.1 1.9E-05 6.3E-10 46.4 8.0 36 68-103 60-95 (213)
492 1lk3_L 9D7 light chain; antige 98.1 6.5E-06 2.2E-10 48.4 5.9 50 3-54 144-200 (210)
493 2aw2_A B and T lymphocyte atte 98.1 8.2E-06 2.8E-10 43.3 5.4 54 1-58 41-101 (120)
494 2zg1_A Sialic acid-binding IG- 98.1 2.6E-06 8.9E-11 50.1 4.0 44 2-53 157-200 (214)
495 1nkr_A P58-CL42 KIR; inhibitor 98.1 3.1E-06 1E-10 49.7 4.2 47 2-52 136-183 (201)
496 3esu_F Antibody 14B7* light ch 98.1 8.6E-06 2.9E-10 49.1 6.2 33 19-51 197-231 (250)
497 2dm7_A KIAA1556 protein; beta- 98.1 1.6E-05 5.6E-10 41.9 6.7 41 69-113 52-92 (108)
498 3mj6_A Junctional adhesion mol 98.1 4.7E-06 1.6E-10 50.6 5.1 34 28-61 199-232 (268)
499 2ptt_A CD48 antigen; CD244, CD 98.1 5.1E-06 1.8E-10 44.2 4.7 26 28-53 71-96 (110)
500 3sob_L Antibody light chain; b 98.1 1.1E-05 3.8E-10 48.1 6.5 51 2-54 167-224 (237)
No 1
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.87 E-value=9.6e-21 Score=113.14 Aligned_cols=111 Identities=14% Similarity=0.172 Sum_probs=85.8
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeC--CeEEEEEecCCCCCCeEEEEEeecCCcceeEE-------------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRG--NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY------------------- 59 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~------------------- 59 (115)
.|.|+|+|||.++.. ..++.+.... ....|.|.++..+|+|.|+|.+.|........
T Consensus 32 ~p~i~W~kng~~l~~--~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~~~~~~~~~~~~~~~~~~~~ 109 (207)
T 3rbs_A 32 NAKVNYIFNEKEIFE--GPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQR 109 (207)
T ss_dssp CCEEEEEETTEEECS--SSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEEEEECTHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCEECcc--CCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEEEEEEccchhhhcccccccc
Confidence 378999999999987 6666555433 45689999999999999999776632111111
Q ss_pred ----------------------------EEEecc-cCCcEEEEEeCC-------------eEEEEEeccCCCCCeeeEEE
Q psy3272 60 ----------------------------MELSVS-VSDRRLMETRGN-------------KHTLTIKNVQSTDFGNYSCV 97 (115)
Q Consensus 60 ----------------------------~~v~g~-~~~~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~ 97 (115)
..+.|. |.|.+.|++++. ...|.|.++..+|.|.|+|.
T Consensus 110 ~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 189 (207)
T 3rbs_A 110 QEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVI 189 (207)
T ss_dssp HHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEE
T ss_pred cccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEEE
Confidence 112567 899999988652 23699999999999999999
Q ss_pred eecCccceeeEEEEEE
Q psy3272 98 ADNNLGRAKKYMELSE 113 (115)
Q Consensus 98 ~~n~~~~~~~~~~l~v 113 (115)
|.|..|..+..+.|.+
T Consensus 190 a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 190 LKDDRGKDKSRLKLVD 205 (207)
T ss_dssp EEETTEEEEEEEEECC
T ss_pred EEcCCCEEEEEEEEec
Confidence 9999999999888865
No 2
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.87 E-value=4.1e-20 Score=109.76 Aligned_cols=111 Identities=20% Similarity=0.215 Sum_probs=91.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE--E-------------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY--M------------------- 60 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~--~------------------- 60 (115)
|.|+|+|++.++.. ..++..........|.|.+++.+|+|.|.|.+.+..+..... +
T Consensus 33 ~~i~W~~~g~~i~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~ 110 (212)
T 2r15_A 33 LKVNWSHNGSAIRY--SDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAA 110 (212)
T ss_dssp CEEEEEETTEECCC--CSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCEEccC--CCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCccc
Confidence 68999999999987 778777666777889999999999999999998866443321 1
Q ss_pred -----------------------------EEecccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeE
Q psy3272 61 -----------------------------ELSVSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYS 95 (115)
Q Consensus 61 -----------------------------~v~g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~ 95 (115)
.+.|.|.|.+.|.+++. ...|.|.++..+|.|.|+
T Consensus 111 ~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 190 (212)
T 2r15_A 111 IAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYG 190 (212)
T ss_dssp HHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEE
T ss_pred ccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEE
Confidence 11568888999987542 238999999999999999
Q ss_pred EEeecCccceeeEEEEEEe
Q psy3272 96 CVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 96 C~~~n~~~~~~~~~~l~v~ 114 (115)
|.|.|..|.....+.|.|.
T Consensus 191 C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 191 LVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEcCCCcEEEEEEEEEE
Confidence 9999999998888888775
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.86 E-value=4.1e-20 Score=124.00 Aligned_cols=113 Identities=24% Similarity=0.355 Sum_probs=96.0
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
.|.|+|+|++.++.. ..++.+........|.|.++..+|+|.|.|.+.|..|.... .+.|
T Consensus 413 ~p~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~ 490 (570)
T 3b43_A 413 PFQVSWHKDKRELRS--GKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTV 490 (570)
T ss_dssp SCCCEEEETTEECCS--SSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCB
T ss_pred CCEEEEEECCEECcC--CCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceec
Confidence 368999999999887 77777666666788999999999999999999999887765 3433
Q ss_pred -----------ecccCCcEEEEEeC----------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 -----------SVSVSDRRLMETRG----------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 -----------~g~~~~~~~~~~~~----------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.+.+.|.+++ ....|.|.++..+|+|.|+|.|.|..|..+..+.|.|+|
T Consensus 491 ~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~e 570 (570)
T 3b43_A 491 VGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVLE 570 (570)
T ss_dssp TTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred CCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEeC
Confidence 56888899998764 134799999999999999999999999999999999875
No 4
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.86 E-value=6.5e-20 Score=107.63 Aligned_cols=112 Identities=24% Similarity=0.345 Sum_probs=91.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.+.|++++..+.. ..++..........|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 37 ~~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~ 114 (197)
T 3lcy_A 37 PDIKWYRFGKELIQ--SRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYY 114 (197)
T ss_dssp CEEEEEETTEEECC--CSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEE
T ss_pred CEEEEEECCEECCC--CccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCccee
Confidence 57999999999877 67777666666779999999999999999999987766554 3333
Q ss_pred -------------ecccCCcEEEEEeCC---------------eEEEEEeccCC-CCCeeeEEEeecCccceeeEEEEEE
Q psy3272 63 -------------SVSVSDRRLMETRGN---------------KHTLTIKNVQS-TDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 63 -------------~g~~~~~~~~~~~~~---------------~~~l~i~~~~~-~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.|.|.+.+.|..++. ...|.|.++.. +|.|.|+|.|.|..|..+..+.|.|
T Consensus 115 ~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 194 (197)
T 3lcy_A 115 GAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEI 194 (197)
T ss_dssp EETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEE
T ss_pred ecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEE
Confidence 568888899987542 25799999985 8999999999999999999999988
Q ss_pred eC
Q psy3272 114 LE 115 (115)
Q Consensus 114 ~~ 115 (115)
.+
T Consensus 195 ~~ 196 (197)
T 3lcy_A 195 QD 196 (197)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 5
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=6.6e-20 Score=113.15 Aligned_cols=112 Identities=24% Similarity=0.350 Sum_probs=94.0
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.+.|++++..+.. ..++..........|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 129 ~~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~ 206 (284)
T 2rik_A 129 IKVLWYKDETEIQE--SSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLK 206 (284)
T ss_dssp CEEEEEETTEECCC--SSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECT
T ss_pred CEEEEEECCEECcC--CCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecC
Confidence 68999999999887 66766666677889999999999999999999988776655 3433
Q ss_pred ----------ecccCCcEEEEEeCC---------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 ----------SVSVSDRRLMETRGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ----------~g~~~~~~~~~~~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+.|.|.+
T Consensus 207 g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 284 (284)
T 2rik_A 207 GADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284 (284)
T ss_dssp TCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEECC
T ss_pred CCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEcC
Confidence 567888899987652 24799999999999999999999999999999998864
No 6
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.85 E-value=5.6e-20 Score=107.86 Aligned_cols=113 Identities=27% Similarity=0.305 Sum_probs=89.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.+.|++++..+......++..........|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 35 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~ 114 (194)
T 2a38_A 35 PEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMT 114 (194)
T ss_dssp CEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEE
T ss_pred CEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEE
Confidence 689999999888763223555555667789999999999999999999887665544 2322
Q ss_pred -------------ecccCCcEEEEEeCC---------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 -------------SVSVSDRRLMETRGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 -------------~g~~~~~~~~~~~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 115 ~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 115 VRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp ECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 567888888887542 2279999999999999999999999999888888773
No 7
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.84 E-value=1.9e-19 Score=105.91 Aligned_cols=113 Identities=24% Similarity=0.317 Sum_probs=89.0
Q ss_pred cceEEEECCEEeCCCCCCCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
|.|.|++++..+... ..++.... ......|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 34 ~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~ 112 (197)
T 2j8h_A 34 PIVKWYRQGKEIIAD-GLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMG 112 (197)
T ss_dssp CEEEEEETTEECCCC-SSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBE
T ss_pred CEEEEEECCEECccC-CCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcCCCCccccccC
Confidence 689999999988651 34444433 334568999999999999999999987665444 3333
Q ss_pred ----------------ecccCCcEEEEEeCC---------------eEEEEEec-cCCCCCeeeEEEeecCccceeeEEE
Q psy3272 63 ----------------SVSVSDRRLMETRGN---------------KHTLTIKN-VQSTDFGNYSCVADNNLGRAKKYME 110 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~~~~---------------~~~l~i~~-~~~~d~G~y~C~~~n~~~~~~~~~~ 110 (115)
.|.|.+.+.|.+++. ...|.|.+ +..+|.|.|+|.|.|..|..+..+.
T Consensus 113 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~ 192 (197)
T 2j8h_A 113 AVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192 (197)
T ss_dssp EEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEE
Confidence 457888899987652 24788999 9999999999999999999999999
Q ss_pred EEEeC
Q psy3272 111 LSELE 115 (115)
Q Consensus 111 l~v~~ 115 (115)
|.|.+
T Consensus 193 l~V~d 197 (197)
T 2j8h_A 193 LDVAD 197 (197)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99875
No 8
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.83 E-value=4.5e-19 Score=103.76 Aligned_cols=109 Identities=28% Similarity=0.515 Sum_probs=87.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.|.|++++..+.. ..++.. ......|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 34 ~~v~W~~~~~~~~~--~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~g 109 (192)
T 2va4_A 34 PAISWFRNGKLIEE--NEKYIL--KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYEN 109 (192)
T ss_dssp CEEEEEETTEECCC--SSSEEE--ETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCEEECTT
T ss_pred CeEEEEECCeEcCC--CccEEE--eCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCcccccCcceEEeC
Confidence 68999999998877 555543 244568999999999999999999887665544 3333
Q ss_pred ---------ecccCCcEEEEEeC----------------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 63 ---------SVSVSDRRLMETRG----------------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 ---------~g~~~~~~~~~~~~----------------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.|.|.+.+.|.+++ ....|.|.++..+|.|.|+|.|.|..|.....+.|
T Consensus 110 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 189 (192)
T 2va4_A 110 GQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYL 189 (192)
T ss_dssp SEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEE
Confidence 56788888998762 12579999999999999999999999999989888
Q ss_pred EEe
Q psy3272 112 SEL 114 (115)
Q Consensus 112 ~v~ 114 (115)
.|.
T Consensus 190 ~V~ 192 (192)
T 2va4_A 190 DIE 192 (192)
T ss_dssp EEC
T ss_pred EeC
Confidence 773
No 9
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.83 E-value=8.6e-19 Score=109.44 Aligned_cols=111 Identities=20% Similarity=0.212 Sum_probs=91.0
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEE---------------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM--------------------- 60 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~--------------------- 60 (115)
|.|+|++++..+.. ..++..........|.|.++..+|.|.|.|.+.+..+.....+
T Consensus 138 ~~i~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~ 215 (317)
T 2y25_A 138 LKVNWSHNGSAIRY--SDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAA 215 (317)
T ss_dssp CEEEEEESSSBCCC--CSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEECCEECCC--CCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcc
Confidence 68999999998877 6777766666677899999999999999999998665443311
Q ss_pred -----------------------------EEecccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeE
Q psy3272 61 -----------------------------ELSVSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYS 95 (115)
Q Consensus 61 -----------------------------~v~g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~ 95 (115)
.+.|.|.|.+.|.+++. ...|.|.++..+|.|.|+
T Consensus 216 ~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 295 (317)
T 2y25_A 216 IAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYG 295 (317)
T ss_dssp HHTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEE
T ss_pred cCcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEE
Confidence 11678889999987642 238999999999999999
Q ss_pred EEeecCccceeeEEEEEEe
Q psy3272 96 CVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 96 C~~~n~~~~~~~~~~l~v~ 114 (115)
|.|.|..|..+..+.|.|.
T Consensus 296 C~a~N~~g~~~~~~~l~V~ 314 (317)
T 2y25_A 296 LVVKNKYGSETSDFTVSVF 314 (317)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEeCCCeEEEEEEEEEE
Confidence 9999999999998888875
No 10
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.83 E-value=6.2e-19 Score=118.31 Aligned_cols=112 Identities=24% Similarity=0.350 Sum_probs=92.9
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
.|.|+|+|++..+.. ..++..........|.|.++..+|+|.|+|.+.|..+.... .+.|
T Consensus 320 ~p~v~W~k~~~~l~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~ 397 (570)
T 3b43_A 320 EIKVLWYKDETEIQE--SSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETL 397 (570)
T ss_dssp SCEEEEEETTEECCC--SSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEEC
T ss_pred CCEEEEeECCEECCC--CCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeec
Confidence 368999999999887 67776666667789999999999999999999998877665 3333
Q ss_pred -----------ecccCCcEEEEEeCC---------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 -----------SVSVSDRRLMETRGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 -----------~g~~~~~~~~~~~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 398 ~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~ 475 (570)
T 3b43_A 398 KGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK 475 (570)
T ss_dssp TTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEec
Confidence 568889999987652 2468999999999999999999999998887777664
No 11
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.83 E-value=6.9e-19 Score=103.18 Aligned_cols=105 Identities=22% Similarity=0.333 Sum_probs=83.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.|+|+|++..+.. .... .....|.|.+++.+|+|.|.|.+.+. +.... .+.|
T Consensus 35 ~~v~W~~~~~~~~~--~~~~-----~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~ 106 (190)
T 2wv3_A 35 MYSYWTKNGVELTA--TRKN-----ASNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVKAAPDITGHKRSENKNE 106 (190)
T ss_dssp EEEEEEETTEECTT--CCBC-----CSEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEECCCEEEEECSEEEEET
T ss_pred eEEEEEECCEECcc--cceE-----eccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEecCCcccccCCcceeeC
Confidence 57999999998876 3321 25688999999999999999999887 44443 3333
Q ss_pred ----------ecccCCcEEEEEe--CC------------------eEEEEEeccC-CCCCeeeEEEeecCccceeeEEEE
Q psy3272 63 ----------SVSVSDRRLMETR--GN------------------KHTLTIKNVQ-STDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 ----------~g~~~~~~~~~~~--~~------------------~~~l~i~~~~-~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.|.|.|.+.|.+. +. ...|.|.++. .+|.|.|+|.|.|..|.....+.|
T Consensus 107 g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 186 (190)
T 2wv3_A 107 GQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVL 186 (190)
T ss_dssp TSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEE
T ss_pred CCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEE
Confidence 5688889999883 21 1269999999 799999999999999998888888
Q ss_pred EEe
Q psy3272 112 SEL 114 (115)
Q Consensus 112 ~v~ 114 (115)
.|.
T Consensus 187 ~V~ 189 (190)
T 2wv3_A 187 RVR 189 (190)
T ss_dssp EEE
T ss_pred EEE
Confidence 774
No 12
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.82 E-value=2.2e-18 Score=106.34 Aligned_cols=111 Identities=27% Similarity=0.361 Sum_probs=91.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.|+|+|++..+.. ..++..........|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 35 ~~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~ 112 (284)
T 2rik_A 35 IKITWAKDNREIRP--GGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVK 112 (284)
T ss_dssp CEEEEEETTEECCS--SSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEE
T ss_pred CEEEEEECCEECcC--CCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEec
Confidence 58999999999887 67776666677899999999999999999999987766544 3333
Q ss_pred -----------ecccCCcEEEEEeCC---------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 -----------SVSVSDRRLMETRGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 -----------~g~~~~~~~~~~~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 113 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 190 (284)
T 2rik_A 113 QDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVK 190 (284)
T ss_dssp TTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEe
Confidence 457888888887542 3479999999999999999999999998888888774
No 13
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.82 E-value=4.9e-19 Score=105.54 Aligned_cols=107 Identities=13% Similarity=0.046 Sum_probs=78.7
Q ss_pred cceEEEECCEEeC---------------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE--
Q psy3272 2 GMMSWYQDTFLIE---------------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL-- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~---------------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v-- 62 (115)
|.|+|+|+|.++. .....++..........|.|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 26 ~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 105 (203)
T 4fa8_A 26 IEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVK 105 (203)
T ss_dssp SEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred cEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecC
Confidence 6899999864211 00022344444566788999999999999999999998877666 3433
Q ss_pred -------------------------ecccCCcEEEEEeCC-------------------eEEEEEeccCCCCCeeeEEEe
Q psy3272 63 -------------------------SVSVSDRRLMETRGN-------------------KHTLTIKNVQSTDFGNYSCVA 98 (115)
Q Consensus 63 -------------------------~g~~~~~~~~~~~~~-------------------~~~l~i~~~~~~d~G~y~C~~ 98 (115)
.|.|.|.+.|..++. ...+.|.++..+|.|.|+|.|
T Consensus 106 p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A 185 (203)
T 4fa8_A 106 PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVG 185 (203)
T ss_dssp EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEE
T ss_pred CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 678999999965321 124566789999999999999
Q ss_pred ecCccceeeE
Q psy3272 99 DNNLGRAKKY 108 (115)
Q Consensus 99 ~n~~~~~~~~ 108 (115)
.|..|..+..
T Consensus 186 ~N~~G~a~~v 195 (203)
T 4fa8_A 186 KNDKEEAHGV 195 (203)
T ss_dssp ESSSCEEEEE
T ss_pred EcCCCEEEEE
Confidence 9999997753
No 14
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.82 E-value=2e-18 Score=102.81 Aligned_cols=112 Identities=22% Similarity=0.368 Sum_probs=86.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEe-CCeEEEEEecCCC-CCCeEEEEEeecCCcc-eeE--EEEE--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETR-GNKHTLTIKNVQS-TDFGNYSCVADNNLGR-AKK--YMEL-------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~-~d~G~y~C~~~~~~~~-~~~--~~~v-------------- 62 (115)
|.|.|++++..+... ..++..... .....|.|.++.. +|+|.|.|.+.+..+. ... .+.|
T Consensus 36 ~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~ 114 (212)
T 2yd1_A 36 PSIVWRKNGKKVSGT-QSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVIT 114 (212)
T ss_dssp CEEEEEETTEECCTT-STTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEE
T ss_pred CeEEEEECCEECCCC-cceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeE
Confidence 589999999988731 555554433 3347899999999 9999999999987766 222 3333
Q ss_pred --------------------ecccCCcEEEEEeCC------------eEEEEEeccCCCCCeeeEEEeecCccceeeE-E
Q psy3272 63 --------------------SVSVSDRRLMETRGN------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKY-M 109 (115)
Q Consensus 63 --------------------~g~~~~~~~~~~~~~------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~-~ 109 (115)
.|.|.+.+.|..++. ...|.|.++..+|.|.|+|.|.|..|..... +
T Consensus 115 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~ 194 (212)
T 2yd1_A 115 QGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKAT 194 (212)
T ss_dssp ECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred eCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEE
Confidence 457888888987652 1279999999999999999999999997654 7
Q ss_pred EEEEe
Q psy3272 110 ELSEL 114 (115)
Q Consensus 110 ~l~v~ 114 (115)
.|.|.
T Consensus 195 ~l~V~ 199 (212)
T 2yd1_A 195 NLYVK 199 (212)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77775
No 15
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.81 E-value=3.7e-18 Score=101.73 Aligned_cols=111 Identities=23% Similarity=0.293 Sum_probs=82.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEE-eCCeEEEEEecC-CCCCCeEEEEEeecCCcceeE--EEEE---------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMET-RGNKHTLTIKNV-QSTDFGNYSCVADNNLGRAKK--YMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~-~~~d~G~y~C~~~~~~~~~~~--~~~v--------------- 62 (115)
|.|.|++++..+.. ........ ......|.|.++ ..+|+|.|.|.+.+..+.... .+.|
T Consensus 36 ~~v~W~k~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~ 113 (212)
T 2yd6_A 36 PKIVWNKKGKKVSN--QRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDM 113 (212)
T ss_dssp CEEEEEETTEECCC--TTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEE
T ss_pred CEEEEEECCcCCCC--CceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeec
Confidence 68999999998875 33222222 234678999999 499999999999987766444 2322
Q ss_pred -------------------ecccCCcEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccce
Q psy3272 63 -------------------SVSVSDRRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRA 105 (115)
Q Consensus 63 -------------------~g~~~~~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~ 105 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|..
T Consensus 114 ~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 193 (212)
T 2yd6_A 114 GPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTR 193 (212)
T ss_dssp CCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred CCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcc
Confidence 567888899987541 2689999999999999999999999985
Q ss_pred ee-EEEEEEe
Q psy3272 106 KK-YMELSEL 114 (115)
Q Consensus 106 ~~-~~~l~v~ 114 (115)
.+ .+.|.|+
T Consensus 194 ~s~~a~l~~~ 203 (212)
T 2yd6_A 194 YSAPANLYVR 203 (212)
T ss_dssp ECCCEEEEEE
T ss_pred ccccccEEEE
Confidence 43 5556553
No 16
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.81 E-value=3e-18 Score=100.72 Aligned_cols=108 Identities=18% Similarity=0.298 Sum_probs=82.5
Q ss_pred cceEEEECCEEeCCCCC--CCEEEEEeCC-------eEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE-------
Q psy3272 2 GMMSWYQDTFLIEPSVS--DRRLMETRGN-------KHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~--~~~~~~~~~~-------~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v------- 62 (115)
|.|+|+|++..+.. . .++....... ...|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 33 ~~v~W~~~g~~l~~--~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~ 110 (195)
T 2c5d_C 33 PEVHWLRDGQILEL--ADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFL 110 (195)
T ss_dssp CCCEEEETTEECCS--CEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEE
T ss_pred cEEEEEECCEEccc--CCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEecCCeEE
Confidence 68999999998876 4 2233322222 578999999999999999999987654322 3333
Q ss_pred --------------------ecccCC-cEEEEEeC----------CeEEEEEeccCCCCCeeeEEEeecCcccee-eEEE
Q psy3272 63 --------------------SVSVSD-RRLMETRG----------NKHTLTIKNVQSTDFGNYSCVADNNLGRAK-KYME 110 (115)
Q Consensus 63 --------------------~g~~~~-~~~~~~~~----------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~-~~~~ 110 (115)
.|.|.| .+.|.+++ ....|.|.++. |+|.|+|.|.|..|... ..+.
T Consensus 111 ~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~ 188 (195)
T 2c5d_C 111 EEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTAT 188 (195)
T ss_dssp ECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTSSCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEE
T ss_pred cCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCcCCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEE
Confidence 568888 89998876 34689999887 78999999999999875 6777
Q ss_pred EEE
Q psy3272 111 LSE 113 (115)
Q Consensus 111 l~v 113 (115)
|.|
T Consensus 189 l~V 191 (195)
T 2c5d_C 189 ITV 191 (195)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
No 17
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.81 E-value=3.1e-18 Score=100.18 Aligned_cols=109 Identities=23% Similarity=0.357 Sum_probs=84.6
Q ss_pred ceEEEE-CCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------
Q psy3272 3 MMSWYQ-DTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---------------- 62 (115)
Q Consensus 3 ~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---------------- 62 (115)
.+.|++ ++..+.. ..++..........|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 32 ~v~W~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~ 109 (189)
T 2v44_A 32 SIDWYNPQGEKIIS--TQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFK 109 (189)
T ss_dssp EEEEECTTSCBCCC--CSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEE
T ss_pred eEEEEeCCCCccCC--CceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEe
Confidence 689999 7777766 67777666666789999999999999999999987765522 3333
Q ss_pred -----------ecccCCcEEEEEeCCe--------------EEEEEeccCCCCCeeeEEEeecCccceee--EEEEEE
Q psy3272 63 -----------SVSVSDRRLMETRGNK--------------HTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSE 113 (115)
Q Consensus 63 -----------~g~~~~~~~~~~~~~~--------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~--~~~l~v 113 (115)
.|.|.|.+.|.+++.. ..|.|.++..+|.|.|+|.|.|..+.... .+.+.|
T Consensus 110 ~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~V 187 (189)
T 2v44_A 110 QGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV 187 (189)
T ss_dssp TTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred CCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEEEEEccccCceeeeeEEEEE
Confidence 5688889999876531 26999999999999999999999876443 444444
No 18
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.80 E-value=8.4e-19 Score=112.70 Aligned_cols=108 Identities=29% Similarity=0.402 Sum_probs=85.6
Q ss_pred CcceEEEEC-CEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE---------------
Q psy3272 1 MGMMSWYQD-TFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL--------------- 62 (115)
Q Consensus 1 ~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v--------------- 62 (115)
.|.+.|+|+ +..+.. ..+ .......|.|.++..+|+|.|.|.+.|..+.... .+.|
T Consensus 234 ~p~i~W~k~~~~~~~~--~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v 307 (384)
T 3kld_A 234 VPTILWRRADGKPIAR--KAR----RHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHV 307 (384)
T ss_dssp CCEEEEEETTCCCCCT--TCE----ECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEE
T ss_pred CCcEEEEeCCCccccc--cce----ecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEe
Confidence 378999995 444443 221 2234568999999999999999999998877655 3333
Q ss_pred ------------ecccCCcEEEEEeCCe-----------EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ------------SVSVSDRRLMETRGNK-----------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ------------~g~~~~~~~~~~~~~~-----------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++.. ..|.|..+..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 308 ~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 308 AMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp CTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 6789999999887631 379999999999999999999999999999989885
No 19
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.80 E-value=7.7e-19 Score=105.27 Aligned_cols=111 Identities=24% Similarity=0.433 Sum_probs=85.1
Q ss_pred cceEEEECCEEeCCCCCCCEE-EEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRL-METRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
|.|.|++++..+.. ..++. .........|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 49 ~~v~W~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~ 126 (231)
T 3ojm_B 49 PTMRWLKNGKEFKQ--EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPA 126 (231)
T ss_dssp CEEEEEETTEECCG--GGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSC
T ss_pred CeEEEEECCccccc--cccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCC
Confidence 68999999998865 22211 112234568999999999999999999987766544 3333
Q ss_pred ----------------ecccCCcEEEEE----eCC----------------------eEEEEEeccCCCCCeeeEEEeec
Q psy3272 63 ----------------SVSVSDRRLMET----RGN----------------------KHTLTIKNVQSTDFGNYSCVADN 100 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~----~~~----------------------~~~l~i~~~~~~d~G~y~C~~~n 100 (115)
.|.|.+.+.|.+ ++. ...|.|.++..+|.|.|+|.|.|
T Consensus 127 ~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 206 (231)
T 3ojm_B 127 NASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSN 206 (231)
T ss_dssp CEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEE
T ss_pred ceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEe
Confidence 467888899987 221 12599999999999999999999
Q ss_pred CccceeeEEEEEEe
Q psy3272 101 NLGRAKKYMELSEL 114 (115)
Q Consensus 101 ~~~~~~~~~~l~v~ 114 (115)
..|..+..+.|.|.
T Consensus 207 ~~g~~~~~~~l~V~ 220 (231)
T 3ojm_B 207 YIGQANQSAWLTVL 220 (231)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred ccceEeeEEEEEEe
Confidence 99999888888875
No 20
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.80 E-value=1.4e-18 Score=111.32 Aligned_cols=112 Identities=22% Similarity=0.332 Sum_probs=86.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---------------- 62 (115)
|.|.|+|++..+......++.......+..|.|.++..+|+|.|.|.+.+..+.... .|.|
T Consensus 242 ~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~ 321 (395)
T 1bih_A 242 GYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVV 321 (395)
T ss_dssp CCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEE
T ss_pred CeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEe
Confidence 679999999988752233332211223448999999999999999999988766433 3333
Q ss_pred ------------ecccCCcEEEEEeCCe----------EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 63 ------------SVSVSDRRLMETRGNK----------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 63 ------------~g~~~~~~~~~~~~~~----------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.|.|.|.+.|.+++.. ..|.|.++..+|.|.|+|.|.|..|.....+.|.|
T Consensus 322 ~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 322 KQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp CTTSCEEEECEEEEESCCCCEEEETTEECCSSSEEEETTEEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCeEEEEEEECcccCCeeEEEECCEECCCCceEEECCEEEEeeCCcccCEEEEEEEEccCCCceEEEEEEE
Confidence 5688889999886532 27999999999999999999999999999888877
No 21
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.80 E-value=6.8e-19 Score=102.65 Aligned_cols=110 Identities=15% Similarity=0.145 Sum_probs=81.1
Q ss_pred cceEEEECCEEeCC--------CCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce--eE--EEEE-------
Q psy3272 2 GMMSWYQDTFLIEP--------SVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA--KK--YMEL------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~--------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~--~~~v------- 62 (115)
|.|.|+|++..+.. ....++.+ .....|.|.+++.+|+|.|.|.+.+..+.. .. .|.|
T Consensus 28 ~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~---~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~~p 104 (176)
T 1hng_A 28 DEVRWERGSTLVAEFKRKMKPFLKSGAFEI---LANGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKP 104 (176)
T ss_dssp EEEEEEETTEEEEEEETTSCCEESSTTEEE---CTTSCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCCCC
T ss_pred ccEEEEeCCceeEEEcCCCeecCCCCeEEE---CCCCcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCCCC
Confidence 57999999975520 01344443 123459999999999999999999887765 32 3333
Q ss_pred ---------------ecccCCcEEEEEeCCeE----EEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ---------------SVSVSDRRLMETRGNKH----TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ---------------~g~~~~~~~~~~~~~~~----~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++... .+.|..+..+|.|.|+|.|.|..|.......|.+.
T Consensus 105 ~i~~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~~ 175 (176)
T 1hng_A 105 MIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNCP 175 (176)
T ss_dssp EEEEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEEEEETTEEEEEEECCCCC
T ss_pred EEEecCCcEEEEEEecCCCCcEEEEEECCEECCCCCcEEEEEEEccCCeEEEEEEEecCCCceecccccCC
Confidence 45788899998876422 35677888999999999999999998887766543
No 22
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.79 E-value=1.7e-18 Score=104.61 Aligned_cols=111 Identities=26% Similarity=0.416 Sum_probs=84.8
Q ss_pred cceEEEECCEEeCCCCCCCE-EEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRR-LMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
|.|.|++++..+.. ..+. ..........|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 45 ~~v~W~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~ 122 (241)
T 3grw_A 45 PSISWLKNGREFRG--EHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPA 122 (241)
T ss_dssp CEEEEEETTEECCG--GGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTC
T ss_pred ceeEEEECCcccCC--CCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCCCCceeecCCCc
Confidence 68999999998865 2221 1112234568999999999999999999887665544 3333
Q ss_pred ----------------ecccCCcEEEEE----eC-----------------------CeEEEEEeccCCCCCeeeEEEee
Q psy3272 63 ----------------SVSVSDRRLMET----RG-----------------------NKHTLTIKNVQSTDFGNYSCVAD 99 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~----~~-----------------------~~~~l~i~~~~~~d~G~y~C~~~ 99 (115)
.|.|.+.+.|.+ ++ ....|.|.++..+|.|.|+|.|.
T Consensus 123 ~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 202 (241)
T 3grw_A 123 NQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRAT 202 (241)
T ss_dssp SEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEE
T ss_pred cceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEe
Confidence 468888999988 22 12369999999999999999999
Q ss_pred cCccceeeEEEEEEe
Q psy3272 100 NNLGRAKKYMELSEL 114 (115)
Q Consensus 100 n~~~~~~~~~~l~v~ 114 (115)
|..|..+..+.|.|.
T Consensus 203 N~~g~~~~~~~l~V~ 217 (241)
T 3grw_A 203 NFIGVAEKAFWLSVH 217 (241)
T ss_dssp CSSCEEEEEEEEEC-
T ss_pred cCcceEEEEEEEEec
Confidence 999999988888874
No 23
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.79 E-value=8.9e-18 Score=97.68 Aligned_cols=108 Identities=18% Similarity=0.263 Sum_probs=81.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCC--eEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGN--KHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL-------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v-------------- 62 (115)
|.|.|+|++..+.. ..+........ ...|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 32 ~~v~W~k~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~ 109 (182)
T 1rhf_A 32 PDIQWVKDGAVVQN--LDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLA 109 (182)
T ss_dssp CCEEEEETTEECCS--SEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCCEE
T ss_pred CeEEEEECCeecCC--CCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcceE
Confidence 68999999998876 44433332222 478999999999999999999987543222 3433
Q ss_pred -------------ecccCC-cEEEEEeCC--------eEEEEEeccCCCCCeeeEEEeecCcccee-eEEEEEE
Q psy3272 63 -------------SVSVSD-RRLMETRGN--------KHTLTIKNVQSTDFGNYSCVADNNLGRAK-KYMELSE 113 (115)
Q Consensus 63 -------------~g~~~~-~~~~~~~~~--------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~-~~~~l~v 113 (115)
.|.|.| .+.|..++. ...|.|.++ +|.|.|+|.|.|..|... ..+.|.|
T Consensus 110 ~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 110 VPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEESSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCCCceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 568888 899988652 457888888 589999999999999875 4777776
No 24
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.79 E-value=3.1e-18 Score=109.97 Aligned_cols=109 Identities=20% Similarity=0.334 Sum_probs=87.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.++|++++..+.. ... ........|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 252 ~~v~W~~~~~~~~~--~~~---~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~ 326 (404)
T 3p3y_A 252 PDIAWYKKGGDLPS--DKA---KFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAP 326 (404)
T ss_dssp CEEEEEETTBCCCT--TTE---EEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECT
T ss_pred CcEEEEECCEECCC--Ccc---cccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeec
Confidence 68999999988765 332 12234568999999999999999999998877655 3333
Q ss_pred ----------ecccCCcEEEEEeCC--------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 ----------SVSVSDRRLMETRGN--------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ----------~g~~~~~~~~~~~~~--------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+.|.|.+
T Consensus 327 g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 327 GEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp TCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 568889999988652 12699999999999999999999999999999998864
No 25
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.79 E-value=4.3e-18 Score=99.33 Aligned_cols=110 Identities=24% Similarity=0.297 Sum_probs=79.3
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE----EEEE---------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK----YMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~----~~~v--------------- 62 (115)
|.+.|++++..+......++.. .....|.|.+++.+|+|.|.|.+.+..+.... .+.+
T Consensus 32 ~~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~ 108 (189)
T 2v5t_A 32 PAVSWLYHNEEVTTISDNRFAM---LANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNA 108 (189)
T ss_dssp CEEEEEC-----CBCCCTTEEE---CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEE
T ss_pred CEEEEEECCccceeccCCeEEE---ecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccc
Confidence 6899999998776422444432 23457999999999999999999876533321 2222
Q ss_pred --------------ecccCCcEEEEEeCC-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 --------------SVSVSDRRLMETRGN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 --------------~g~~~~~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|..++. ...|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 109 ~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 109 TAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp ETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred cccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 457888889987652 2369999999999999999999999998888887764
No 26
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.78 E-value=2.9e-18 Score=100.85 Aligned_cols=112 Identities=23% Similarity=0.244 Sum_probs=84.0
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE-----EE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK-----YM---------------- 60 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~-----~~---------------- 60 (115)
|.|+|++++..+......+. ........|.|.+++.+|+|.|.|.+.+..+.... .+
T Consensus 40 ~~v~W~~~~~~~~~~~~~~~--~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 117 (201)
T 3s97_C 40 LSYRWLLNEFPVFITMDKRR--FVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIV 117 (201)
T ss_dssp CEEEEEESSTTCBCCCSSSE--EECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEE
T ss_pred eEEEEEECCceeeeeeCCCe--EEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceE
Confidence 68999999877643112222 12234577999999999999999999874422221 10
Q ss_pred ------------------EEecccCCcEEEEEeCC-----------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 61 ------------------ELSVSVSDRRLMETRGN-----------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 61 ------------------~v~g~~~~~~~~~~~~~-----------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.+.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+.|
T Consensus 118 ~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 197 (201)
T 3s97_C 118 VQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARI 197 (201)
T ss_dssp EECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeecCCCCEEEEccCChhhCEEEEEEEEecCCceeeeEEE
Confidence 01568889999988652 3479999999999999999999999999999999
Q ss_pred EEeC
Q psy3272 112 SELE 115 (115)
Q Consensus 112 ~v~~ 115 (115)
.|.+
T Consensus 198 ~V~a 201 (201)
T 3s97_C 198 YVQA 201 (201)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8864
No 27
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.78 E-value=1.3e-17 Score=97.62 Aligned_cols=110 Identities=22% Similarity=0.413 Sum_probs=81.9
Q ss_pred cceEEEE-CCEEeCCCCCCCEEEE-EeCCeEEEEEecCCCCCCeEEEEEeecCCcc-eeE--EEEE--------------
Q psy3272 2 GMMSWYQ-DTFLIEPSVSDRRLME-TRGNKHTLTIKNVQSTDFGNYSCVADNNLGR-AKK--YMEL-------------- 62 (115)
Q Consensus 2 p~v~W~~-~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~~~--~~~v-------------- 62 (115)
|.+.|++ ++..+... ..++... .......|.|.++..+|+|.|.|.+.+..+. ... .+.|
T Consensus 33 ~~v~W~~~~g~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~ 111 (191)
T 1epf_A 33 KDISWFSPNGEKLSPN-QQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQE 111 (191)
T ss_dssp CEEEEECTTSCEECCB-SSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEE
T ss_pred ceEEEEeCCCccccCC-CCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEe
Confidence 6899999 88877631 4444433 2356789999999999999999999987732 222 3333
Q ss_pred -------------ecccCCcEEEEEeCCe--------------EEEEEeccCCCCCeeeEEEeecCccceeeEEEEE
Q psy3272 63 -------------SVSVSDRRLMETRGNK--------------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 63 -------------~g~~~~~~~~~~~~~~--------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~ 112 (115)
.|.|.+.+.|.+++.. ..|.|.++..+|.|.|+|.|.|..+.......+.
T Consensus 112 ~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~ 188 (191)
T 1epf_A 112 FKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQ 188 (191)
T ss_dssp CCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEE
T ss_pred ecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecCCeEEECCCChhhCEEEEEEEEEecceeEEEEEEE
Confidence 5688889999886521 2799999999999999999999997644444343
No 28
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.78 E-value=4.6e-17 Score=101.30 Aligned_cols=112 Identities=24% Similarity=0.312 Sum_probs=87.3
Q ss_pred cceEEEECCEEeCCCCCCCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
|.|+|+|++..+... ..++.... ......|.|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 34 ~~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~ 112 (305)
T 2nzi_A 34 PIVKWYRQGKEIIAD-GLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMG 112 (305)
T ss_dssp CEEEEEETTEECCCC-SSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSC
T ss_pred CeEEEEECCEEcccC-CCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCccCCCccccccc
Confidence 689999999988651 33444432 344568999999999999999999988766544 3333
Q ss_pred ----------------ecccCCcEEEEEeCC---------------eEEEEEec-cCCCCCeeeEEEeecCccceeeEEE
Q psy3272 63 ----------------SVSVSDRRLMETRGN---------------KHTLTIKN-VQSTDFGNYSCVADNNLGRAKKYME 110 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~~~~---------------~~~l~i~~-~~~~d~G~y~C~~~n~~~~~~~~~~ 110 (115)
.|.|.+.+.|.+++. ...|.|.+ +..+|.|.|+|.|.|..|.....+.
T Consensus 113 ~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 192 (305)
T 2nzi_A 113 AVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE 192 (305)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred cEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEE
Confidence 457888888987542 24788999 9999999999999999999888888
Q ss_pred EEEe
Q psy3272 111 LSEL 114 (115)
Q Consensus 111 l~v~ 114 (115)
|.|.
T Consensus 193 l~v~ 196 (305)
T 2nzi_A 193 LDVA 196 (305)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8764
No 29
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.77 E-value=6.7e-17 Score=103.49 Aligned_cols=113 Identities=24% Similarity=0.444 Sum_probs=88.4
Q ss_pred CcceEEEEC--CEEeCCC---CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------
Q psy3272 1 MGMMSWYQD--TFLIEPS---VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------- 62 (115)
Q Consensus 1 ~p~v~W~~~--~~~~~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------- 62 (115)
.|.|+|+|+ |..+... ...++.+........|.|.++..+|+|.|.|.+.+..+.... .|.|
T Consensus 29 ~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~ 108 (389)
T 2jll_A 29 IPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQT 108 (389)
T ss_dssp CCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECCSCC
T ss_pred CCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEecCcc
Confidence 368999999 8877541 134555544456789999999999999999999998777655 3433
Q ss_pred ----------------ecccCCcEEEEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEE
Q psy3272 63 ----------------SVSVSDRRLMETRGN-----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 109 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~ 109 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+
T Consensus 109 ~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~ 188 (389)
T 2jll_A 109 IYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEY 188 (389)
T ss_dssp EEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEE
T ss_pred eEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEE
Confidence 567888899987542 23699999999999999999999999987777
Q ss_pred EEEE
Q psy3272 110 ELSE 113 (115)
Q Consensus 110 ~l~v 113 (115)
.+.+
T Consensus 189 ~l~v 192 (389)
T 2jll_A 189 ILAL 192 (389)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6655
No 30
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.77 E-value=3.6e-17 Score=101.89 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=85.4
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--------------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK-------------------- 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~-------------------- 58 (115)
.|.+.|++++..+.. ..++.+... .....|.|.++..+|+|.|.|.+.+.......
T Consensus 137 ~~~v~W~~~~~~i~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (312)
T 2y23_A 137 NAKVNYIFNEKEIFE--GPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQR 214 (312)
T ss_dssp SCEEEEEETTEEECS--SSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCEECee--CCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccc
Confidence 368999999999987 666555433 44567999999999999999988654322211
Q ss_pred ---------------------------EEEEecccCC-cEEEEEeCC-------------eEEEEEeccCCCCCeeeEEE
Q psy3272 59 ---------------------------YMELSVSVSD-RRLMETRGN-------------KHTLTIKNVQSTDFGNYSCV 97 (115)
Q Consensus 59 ---------------------------~~~v~g~~~~-~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~ 97 (115)
...+.|.|.| .+.|.+++. ...|.|.++..+|.|.|+|.
T Consensus 215 ~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~ 294 (312)
T 2y23_A 215 QEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVI 294 (312)
T ss_dssp HHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEE
T ss_pred cchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEE
Confidence 1112667777 889977542 25899999999999999999
Q ss_pred eecCccceeeEEEEEE
Q psy3272 98 ADNNLGRAKKYMELSE 113 (115)
Q Consensus 98 ~~n~~~~~~~~~~l~v 113 (115)
|.|..|.....+.|.+
T Consensus 295 a~N~~G~~~~~~~l~i 310 (312)
T 2y23_A 295 LKDDRGKDKSRLKLVD 310 (312)
T ss_dssp EESTTCCEEEEEEECS
T ss_pred EEcCCCceeeeeEEEe
Confidence 9999999998888865
No 31
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.77 E-value=9.5e-18 Score=100.43 Aligned_cols=102 Identities=20% Similarity=0.208 Sum_probs=80.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---------------- 62 (115)
|.|.|++++..+.. . ....|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 48 ~~v~W~~~~~~~~~--~---------~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~ 116 (218)
T 3k0w_A 48 VQYQWFKMNKEIPN--G---------NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSE 116 (218)
T ss_dssp SEEEEEETTEECTT--C---------CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCC
T ss_pred CEEEEEECCEECCC--C---------CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccC
Confidence 68999999998876 2 3567999999999999999999987553211 1211
Q ss_pred --------------------------ecccCCcEEEEEeCC------eEEEEEeccCCCCCeeeEEEeecCccc-eeeEE
Q psy3272 63 --------------------------SVSVSDRRLMETRGN------KHTLTIKNVQSTDFGNYSCVADNNLGR-AKKYM 109 (115)
Q Consensus 63 --------------------------~g~~~~~~~~~~~~~------~~~l~i~~~~~~d~G~y~C~~~n~~~~-~~~~~ 109 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|. .+..+
T Consensus 117 ~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~ 196 (218)
T 3k0w_A 117 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKV 196 (218)
T ss_dssp SSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCE
T ss_pred CCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCCCEEEEeecChhcCEEEEEEEEcCCCCceeeeE
Confidence 568888899988653 347999999999999999999998887 55577
Q ss_pred EEEEe
Q psy3272 110 ELSEL 114 (115)
Q Consensus 110 ~l~v~ 114 (115)
.|.|.
T Consensus 197 ~l~V~ 201 (218)
T 3k0w_A 197 EIIID 201 (218)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77664
No 32
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.77 E-value=1.1e-17 Score=103.38 Aligned_cols=111 Identities=20% Similarity=0.278 Sum_probs=84.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce-eE---EEEE---------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA-KK---YMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~---~~~v--------------- 62 (115)
|.|.|++++..+......++.. .....|.|.++..+|+|.|.|.+.+..+.. .. .+.|
T Consensus 130 ~~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~ 206 (291)
T 1qz1_A 130 PTIIWKHKGRDVILKKDVRFIV---LSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNA 206 (291)
T ss_dssp CEEEEEETTSCSSTTCCTTEEE---CTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEE
T ss_pred CEEEEEECCEEcccCCCceEEE---ccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCccccccccccc
Confidence 6899999998775422333322 234579999999999999999998754322 11 2222
Q ss_pred --------------ecccCCcEEEEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 63 --------------SVSVSDRRLMETRGN-----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 --------------~g~~~~~~~~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.|.|.|.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|..+..+.|
T Consensus 207 ~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 286 (291)
T 1qz1_A 207 TANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHL 286 (291)
T ss_dssp ETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEE
Confidence 568888999987652 2369999999999999999999999999999999
Q ss_pred EEeC
Q psy3272 112 SELE 115 (115)
Q Consensus 112 ~v~~ 115 (115)
.|.+
T Consensus 287 ~V~~ 290 (291)
T 1qz1_A 287 KVFA 290 (291)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8863
No 33
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.77 E-value=1.2e-17 Score=97.68 Aligned_cols=110 Identities=32% Similarity=0.464 Sum_probs=83.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---------------- 62 (115)
|.|.|++++..+... ..++... ..+..|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 37 ~~i~W~~~~~~~~~~-~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~ 113 (192)
T 2iep_A 37 PEISWTRNKILIKLF-DTRYSIR--ENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKII 113 (192)
T ss_dssp CEEEEEETTEECCTT-CTTEEEE--GGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEE
T ss_pred CeEEEEECCEEcccc-CccEEEc--CCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEe
Confidence 689999999987641 3444432 34457999999999999999999987655322 3333
Q ss_pred -----------ecccCCcEEEEEeCC------------eEEEEEeccCCCCCeeeEEEeecCccce-eeEEEEEEe
Q psy3272 63 -----------SVSVSDRRLMETRGN------------KHTLTIKNVQSTDFGNYSCVADNNLGRA-KKYMELSEL 114 (115)
Q Consensus 63 -----------~g~~~~~~~~~~~~~------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~-~~~~~l~v~ 114 (115)
.|.|.+.+.|..++. ...|.|.++..+|.|.|+|.|.|..|.. +..+.|.|.
T Consensus 114 ~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 114 EGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189 (192)
T ss_dssp TTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEE
Confidence 567888899987652 2369999999999999999999999986 446777664
No 34
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.77 E-value=1.6e-17 Score=112.54 Aligned_cols=109 Identities=19% Similarity=0.298 Sum_probs=87.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---------------- 62 (115)
|.++|+++|..+.. ..++.+. .....|.|.++..+|+|.|.|.+.|..+...+ .|.|
T Consensus 496 ~~i~W~~~g~~l~~--~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v 571 (642)
T 1e07_A 496 TTYLWWVNGQSLPV--SPRLQLS--NGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSY 571 (642)
T ss_pred cEEEEEECCEeCCC--CCcEEEc--CCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeE
Confidence 68999999999877 5655442 33568999999999999999999988765422 3333
Q ss_pred ------------ecccCCcEEEEEeCC----eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ------------SVSVSDRRLMETRGN----KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ------------~g~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|....++.|.|.
T Consensus 572 ~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~V~ 639 (642)
T 1e07_A 572 LSGANLNLSCHSASNPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSIT 639 (642)
T ss_pred EcCCcEEEEEEeccCCCCeEEEEECCEECccCceEEECcccccCCeEEEEEEEecccCcceeEEEEEE
Confidence 468888999998764 3579999999999999999999999998777766653
No 35
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.76 E-value=2.1e-17 Score=98.47 Aligned_cols=112 Identities=22% Similarity=0.362 Sum_probs=79.0
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCe--EEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNK--HTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL-------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v-------------- 62 (115)
|.|.|+|++..+................ ..|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 39 ~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~ 118 (217)
T 2vr9_A 39 PTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDT 118 (217)
T ss_dssp CEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCE
T ss_pred CeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCcc
Confidence 6899999999886521112222111111 12368889999999999999987765432 3333
Q ss_pred ---------------ecccCCcEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCccceee
Q psy3272 63 ---------------SVSVSDRRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLGRAKK 107 (115)
Q Consensus 63 ---------------~g~~~~~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~ 107 (115)
.|.|.+.+.|.+++.. ..|.|.++..+|.|.|+|.|.|..|....
T Consensus 119 ~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 198 (217)
T 2vr9_A 119 RVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRES 198 (217)
T ss_dssp EECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEEC
T ss_pred EEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceecc
Confidence 4578888999876521 26999999999999999999999999776
Q ss_pred EEEEEE
Q psy3272 108 YMELSE 113 (115)
Q Consensus 108 ~~~l~v 113 (115)
...+.+
T Consensus 199 ~~~~lv 204 (217)
T 2vr9_A 199 SYAKLI 204 (217)
T ss_dssp CCEEEE
T ss_pred ccEEEE
Confidence 544444
No 36
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.76 E-value=1e-17 Score=107.61 Aligned_cols=109 Identities=25% Similarity=0.338 Sum_probs=86.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.+.|++++..+... ..++.. .....|.|.++..+|.|.|.|.+.+..+.... .+.|
T Consensus 251 ~~~~W~~~~~~~~~~-~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~ 326 (403)
T 3laf_A 251 PSFTWLRGEEVIQLR-SKKYSL---LGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYE 326 (403)
T ss_dssp CEEEEEETTEECCCS-SSSEEE---ETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCT
T ss_pred CeEEEEECCeeccCC-CceEEE---CCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEec
Confidence 689999999988651 222222 13457999999999999999999988776655 3333
Q ss_pred ----------ecccCCcEEEEEeCC------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ----------SVSVSDRRLMETRGN------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ----------~g~~~~~~~~~~~~~------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|..+..+.|.|.
T Consensus 327 g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 327 SMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp TCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECC
T ss_pred CCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 568888999988653 2369999999999999999999999999999998875
No 37
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.76 E-value=5.5e-18 Score=100.87 Aligned_cols=100 Identities=15% Similarity=0.249 Sum_probs=76.1
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE--------------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL-------------------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v-------------------- 62 (115)
.|.|+|++..+.. . ...|.|.+++.+|+|.|.|.+.+........+.|
T Consensus 39 ~v~W~k~g~~l~~--~----------~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~~l~V~~~p~~~~~~~~~v~~G~~v 106 (204)
T 3sgj_C 39 STQWFHNESLISS--Q----------ASSYFIDAATVDDSGEYRCQTQLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPI 106 (204)
T ss_dssp CEEEEETTEEESC--C----------SSEEEESSCCGGGCEEEEEEETTSBCCCCEEEEEECSSEEEECSCSEEETTCCE
T ss_pred EEEEEECCEEccc--C----------ccEEEEecccccCCEEEEEEeCCCcccccEEEEEecCceEecCCceeEeCCCcE
Confidence 3999999998876 2 3789999999999999999998754433334444
Q ss_pred ------ecc-cCCcEEEEEeCC-------eEEEEEeccCCCCCeeeEEEeec-CccceeeEEEEEEe
Q psy3272 63 ------SVS-VSDRRLMETRGN-------KHTLTIKNVQSTDFGNYSCVADN-NLGRAKKYMELSEL 114 (115)
Q Consensus 63 ------~g~-~~~~~~~~~~~~-------~~~l~i~~~~~~d~G~y~C~~~n-~~~~~~~~~~l~v~ 114 (115)
.+. |.+.+.|.+++. ...|.|.++..+|.|.|+|.|.| ..+..+..+.|.|.
T Consensus 107 ~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (204)
T 3sgj_C 107 HLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITIT 173 (204)
T ss_dssp EEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEecCCCCCceEEEEECCcEeecccCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEe
Confidence 123 456788887664 24699999999999999999999 44456667777764
No 38
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.76 E-value=2e-17 Score=105.91 Aligned_cols=109 Identities=25% Similarity=0.346 Sum_probs=84.2
Q ss_pred CcceEEEECCEEeCC----CCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE------------
Q psy3272 1 MGMMSWYQDTFLIEP----SVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL------------ 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~----~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v------------ 62 (115)
.|.|+|+|++..+.. ....++.. ....|.|.++..+|+|.|.|.+.|..+.... .|.|
T Consensus 241 ~p~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~ 316 (388)
T 2v5m_A 241 APSFRWYKFIEGTTRKQAVVLNDRVKQ----VSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPT 316 (388)
T ss_dssp CCEEEEEEECTTSSCEEECCCSSSEEE----ETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSE
T ss_pred CCEEEEEecCCCCcccccccccCceec----ccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCc
Confidence 368999997542211 00233221 2457999999999999999999998876655 3333
Q ss_pred ---------------ecccCCcEEEEEeCC-----eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 63 ---------------SVSVSDRRLMETRGN-----KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 63 ---------------~g~~~~~~~~~~~~~-----~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+.|.|
T Consensus 317 ~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 317 QTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEecCCCCEEEEEEeccccCCeEEEEECCEECccCCCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 568889999988763 358999999999999999999999999999988876
No 39
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.76 E-value=7.7e-18 Score=99.54 Aligned_cols=111 Identities=15% Similarity=0.093 Sum_probs=79.7
Q ss_pred cceEEEE-CCEEeCCCCCCCEEEEEe---CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-------------
Q psy3272 2 GMMSWYQ-DTFLIEPSVSDRRLMETR---GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL------------- 62 (115)
Q Consensus 2 p~v~W~~-~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v------------- 62 (115)
|.|.|+| ++..... ..++..... .....|.|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 37 ~~v~W~k~~~~~~~~--~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~p~~~~~~ 114 (202)
T 3bp6_B 37 IRASLQKVENDTSLQ--SERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILE 114 (202)
T ss_dssp EEEEEEECC--CCCB--CSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEEEEE
T ss_pred eEEEEEcCCCccccc--CCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEecCCCCcccEEEEe
Confidence 6799999 4443333 344433211 14578999999999999999999987765444 3333
Q ss_pred -------------ecccCCcEEEEEeCC-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 -------------SVSVSDRRLMETRGN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 -------------~g~~~~~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|...+. ...+.|..+..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 115 ~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~ 192 (202)
T 3bp6_B 115 VPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPL 192 (202)
T ss_dssp CTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC-
T ss_pred cCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEec
Confidence 567888888865432 2456788999999999999999999998888877663
No 40
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.76 E-value=2.8e-17 Score=101.59 Aligned_cols=110 Identities=24% Similarity=0.297 Sum_probs=80.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE----EEEE---------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK----YMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~----~~~v--------------- 62 (115)
|.+.|++++..+......++.. .....|.|.++..+|.|.|.|.+.+..+.... .+.+
T Consensus 128 ~~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~ 204 (291)
T 2wim_A 128 PAVSWLYHNEEVTTISDNRFAM---LANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNA 204 (291)
T ss_dssp CEEEEECC----CBCCCSSEEE---CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEEC
T ss_pred CEEEEEECCccccccCCceEEE---ccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccc
Confidence 6899999998776422334332 23457999999999999999999876543221 2222
Q ss_pred --------------ecccCCcEEEEEeCC-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 --------------SVSVSDRRLMETRGN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 --------------~g~~~~~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|..+..+.|.|.
T Consensus 205 ~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 283 (291)
T 2wim_A 205 TAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 283 (291)
T ss_dssp CSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC-
T ss_pred eecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEE
Confidence 467888999988652 2479999999999999999999999999999988875
No 41
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.76 E-value=2.2e-17 Score=97.77 Aligned_cols=87 Identities=23% Similarity=0.433 Sum_probs=72.4
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------------------ecccCCcEEEEEeCC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------------------SVSVSDRRLMETRGN 77 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------------------~g~~~~~~~~~~~~~ 77 (115)
....|.|.+++.+|+|.|.|.+.+..+.... .|.| .|.|.+.+.|.+.+.
T Consensus 82 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~ 161 (214)
T 3jz7_A 82 GDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSD 161 (214)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECST
T ss_pred CcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCC
Confidence 3577999999999999999999987765544 3444 367888999988431
Q ss_pred -------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 -------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 -------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 162 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 162 SQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp TCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 3489999999999999999999999999999888775
No 42
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.75 E-value=8.6e-18 Score=96.85 Aligned_cols=101 Identities=14% Similarity=0.261 Sum_probs=76.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE-------------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL------------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v------------------- 62 (115)
+.+.|+|++..+.. . ...+.|.+++.+|+|.|.|.+.+........+.|
T Consensus 35 ~~~~W~~~g~~~~~--~----------~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~~~~~~~~~~~~~g~~ 102 (170)
T 3ry4_A 35 DSIQWFHNGNLIPT--H----------TQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQTPHLEFQEGET 102 (170)
T ss_dssp SCEEEEETTEECTT--C----------CSSEEEEECCGGGCEEEEEEETTSBCCCCEEEEEECCSEEEECSCSEECTTCC
T ss_pred ceEEEEECCeEccc--C----------ccceEEEecccccCeEEEEEEeCCCceEeEEEEEECCceEecCCCceeecCCe
Confidence 47999999998876 2 2335567899999999999998754443334443
Q ss_pred --------ecccCCcEEEEEeCC-------eEEEEEeccCCCCCeeeEEEeecCccc-eeeEEEEEEe
Q psy3272 63 --------SVSVSDRRLMETRGN-------KHTLTIKNVQSTDFGNYSCVADNNLGR-AKKYMELSEL 114 (115)
Q Consensus 63 --------~g~~~~~~~~~~~~~-------~~~l~i~~~~~~d~G~y~C~~~n~~~~-~~~~~~l~v~ 114 (115)
.+.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..|. .+..+.|.|+
T Consensus 103 ~~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 103 IMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp EEEEEEEGGGCCEEEEEEEETTEEEEEESSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEECCCCCCCceEEEEECCeEccccCCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEEC
Confidence 224557788887653 357999999999999999999999987 5557777663
No 43
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.75 E-value=8.6e-18 Score=109.62 Aligned_cols=110 Identities=14% Similarity=0.121 Sum_probs=79.1
Q ss_pred cceEEEECCEEeCCCCCCCEEE-EE-----eCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLM-ET-----RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~-~~-----~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v------------- 62 (115)
|.|+|+|++..+.. ...+.. .. ......|.|.++..+|+|.|+|.+.|. ......|.|
T Consensus 258 p~i~W~k~g~~l~~--~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~-~~~~~~L~V~~~p~i~~~~~~~ 334 (423)
T 3qs7_E 258 FGLTWELENKALEE--GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH-PSQSALVTIVEKGFINATNSSE 334 (423)
T ss_dssp CCEEEEESSSBCCG--GGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE-EEEEEEEEEESSCEEEEC---C
T ss_pred cEEEEEECCEEccc--cceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC-CCceEEEEEEeCCcceEcCCCc
Confidence 68999999987754 222111 11 112357999999999999999999887 222224443
Q ss_pred ----------------ecccCCcEEEEEeCCeE-----------EEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ----------------SVSVSDRRLMETRGNKH-----------TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~~~~~~-----------~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++... .+.+.....+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 335 ~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~ 413 (423)
T 3qs7_E 335 DYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR 413 (423)
T ss_dssp EECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--
T ss_pred cEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 57899999999876322 23336677899999999999999999999988875
No 44
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.75 E-value=6e-18 Score=100.21 Aligned_cols=109 Identities=20% Similarity=0.295 Sum_probs=80.6
Q ss_pred cceEEEECCEEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc--ceeE--EEEE-----
Q psy3272 2 GMMSWYQDTFLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG--RAKK--YMEL----- 62 (115)
Q Consensus 2 p~v~W~~~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~--~~~~--~~~v----- 62 (115)
|.|.|++++..+ ......++... ...|.|.+++.+|+|.|.|.+.+..+ .... .+.|
T Consensus 31 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~ 106 (212)
T 1f97_A 31 PRVEWKFVQGSTTALVCYNSQITAPYADRVTFS----SSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPS 106 (212)
T ss_dssp EEEEEEEEETTEEEEEEETTEECGGGTTTEEEE----TTEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCC
T ss_pred cEEEEEECCCceeeEEecCCcccccccCcEEee----ceeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCC
Confidence 679999987542 11113444332 27899999999999999999998755 2222 3333
Q ss_pred -----------------------ecccCCcEEEEEeCC-----------------------eEEEEEeccCCCCCeeeEE
Q psy3272 63 -----------------------SVSVSDRRLMETRGN-----------------------KHTLTIKNVQSTDFGNYSC 96 (115)
Q Consensus 63 -----------------------~g~~~~~~~~~~~~~-----------------------~~~l~i~~~~~~d~G~y~C 96 (115)
.|.|.+.+.|..++. ...|.|.++..+|.|.|+|
T Consensus 107 ~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 186 (212)
T 1f97_A 107 KPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYC 186 (212)
T ss_dssp CCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEE
T ss_pred CcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEE
Confidence 457888899987654 2368999999999999999
Q ss_pred EeecCccce--eeEEEEEEe
Q psy3272 97 VADNNLGRA--KKYMELSEL 114 (115)
Q Consensus 97 ~~~n~~~~~--~~~~~l~v~ 114 (115)
.|.|..|.. +..+.|.|.
T Consensus 187 ~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 187 QAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp EEECSSSCCEECCCEEEEEE
T ss_pred EEccccCCccccceEEEEEE
Confidence 999999987 557777765
No 45
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.75 E-value=1.4e-17 Score=96.66 Aligned_cols=99 Identities=15% Similarity=0.278 Sum_probs=76.3
Q ss_pred eEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE---------------------
Q psy3272 4 MSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL--------------------- 62 (115)
Q Consensus 4 v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v--------------------- 62 (115)
+.|+|++..+.. ....|.|.+++.+|+|.|.|.+.+........+.|
T Consensus 40 ~~W~~~~~~~~~------------~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~~l~V~~~~~~~~~~~~~~~~g~~~~ 107 (175)
T 1fnl_A 40 TQWFHNESLISS------------QASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIH 107 (175)
T ss_dssp CEEEETTEEEES------------SCSEEEESSCCGGGCEEEEEECSSSCCCCCEEEEEECSSEEEECSCSEEETTCCEE
T ss_pred eEEEECCEEccC------------CceEEEEeCCCcccCEEEEEEeeCCcccccEEEEEeCCCceeeCCCceecCCCCEE
Confidence 789999987765 35689999999999999999998765444334444
Q ss_pred -----ecccC-CcEEEEEeCC-------eEEEEEeccCCCCCeeeEEEeecCccc-eeeEEEEEEe
Q psy3272 63 -----SVSVS-DRRLMETRGN-------KHTLTIKNVQSTDFGNYSCVADNNLGR-AKKYMELSEL 114 (115)
Q Consensus 63 -----~g~~~-~~~~~~~~~~-------~~~l~i~~~~~~d~G~y~C~~~n~~~~-~~~~~~l~v~ 114 (115)
.|.++ +.+.|.+++. ...|.|.++..+|.|.|+|.|.|..+. .+..+.|.|.
T Consensus 108 l~C~~~~~~~~~~~~W~k~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 108 LRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EEEEECTTCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEcCCCCCceEEEEEECCeEccCCCCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 33444 4888887663 347999999999999999999997664 5567777775
No 46
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.75 E-value=1.7e-17 Score=106.14 Aligned_cols=105 Identities=25% Similarity=0.285 Sum_probs=84.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.+.|++++..+.. . .......|.|.++..+|.|.|.|.+.+..+.... .+.|
T Consensus 237 ~~i~W~~~~~~~~~--~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~ 308 (382)
T 1cs6_A 237 PQIKWRKLDGSQTS--K------WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADI 308 (382)
T ss_dssp CEEEEEECCSCCSC--C------CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEET
T ss_pred CEEEEEECCccccc--E------EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcC
Confidence 68999998876543 1 1124568999999999999999999988776554 3333
Q ss_pred ----------ecccCCcEEEEEeCCe-----------EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ----------SVSVSDRRLMETRGNK-----------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ----------~g~~~~~~~~~~~~~~-----------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++.. ..|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 309 g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 309 GSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp TCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 5688899999886531 269999999999999999999999999999999886
No 47
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.75 E-value=1.2e-17 Score=97.05 Aligned_cols=100 Identities=20% Similarity=0.355 Sum_probs=77.1
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE--------------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL-------------------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v-------------------- 62 (115)
.+.|++++..+.. ....|.|.+++.+|+|.|.|.+.+..+.....+.|
T Consensus 36 ~i~W~~~~~~~~~------------~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~g~~~ 103 (176)
T 1f2q_A 36 STKWFHNGSLSEE------------TNSSLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQPL 103 (176)
T ss_dssp CCEEEETTEECSC------------CSSEEEECSCCGGGCEEEEEECTTSSCCCCEEEEEECSSEEEEESCSEEETTSCE
T ss_pred eEEEEECCeECCC------------CceEEEEeccceecCEEEEEEcCCccccccEEEEEeCcceeecCCcceeeCCCCE
Confidence 5899999988765 35689999999999999999998766544444444
Q ss_pred -------ecccCCcEEEEEeCC-------eEEEEEeccCCCCCeeeEEEeecCccc-eeeEEEEEEe
Q psy3272 63 -------SVSVSDRRLMETRGN-------KHTLTIKNVQSTDFGNYSCVADNNLGR-AKKYMELSEL 114 (115)
Q Consensus 63 -------~g~~~~~~~~~~~~~-------~~~l~i~~~~~~d~G~y~C~~~n~~~~-~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..+. .+..+.|.|.
T Consensus 104 ~l~C~~~~~~p~~~~~W~~~g~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 170 (176)
T 1f2q_A 104 FLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170 (176)
T ss_dssp EEEEEEGGGCCEEEEEEEETTEECCSCCCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEecCCCCceEEEEEECCEEEeeecCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEe
Confidence 235556888887653 458999999999999999999997544 5556777765
No 48
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.75 E-value=4.4e-18 Score=107.13 Aligned_cols=111 Identities=24% Similarity=0.446 Sum_probs=84.9
Q ss_pred cceEEEECCEEeCCCCCCCE-EEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRR-LMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
|.|.|++++..+.. ..++ ..........|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 153 ~~v~W~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~ 230 (334)
T 1ry7_B 153 PSISWLKNGREFRG--EHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPA 230 (334)
T ss_dssp CEEECCBTTBCCCT--TSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSC
T ss_pred CeEEEEECCEECcc--cccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCC
Confidence 68999999988765 2221 0111234568999999999999999999988766554 3333
Q ss_pred ----------------ecccCCcEEEEE----eCC------------------------eEEEEEeccCCCCCeeeEEEe
Q psy3272 63 ----------------SVSVSDRRLMET----RGN------------------------KHTLTIKNVQSTDFGNYSCVA 98 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~----~~~------------------------~~~l~i~~~~~~d~G~y~C~~ 98 (115)
.|.|.+.+.|.+ ++. ...|.|.++..+|.|.|+|.|
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 310 (334)
T 1ry7_B 231 NQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLA 310 (334)
T ss_dssp CEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEE
T ss_pred ceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEE
Confidence 457788889987 221 026999999999999999999
Q ss_pred ecCccceeeEEEEEEe
Q psy3272 99 DNNLGRAKKYMELSEL 114 (115)
Q Consensus 99 ~n~~~~~~~~~~l~v~ 114 (115)
.|..|.....+.|.|.
T Consensus 311 ~N~~G~~~~~~~l~V~ 326 (334)
T 1ry7_B 311 GNSIGFSHHSAWLVVL 326 (334)
T ss_dssp EESSCCEEEEEEEEEE
T ss_pred eCCCCeEEEEEEEEEE
Confidence 9999999999888886
No 49
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.74 E-value=5.5e-17 Score=101.27 Aligned_cols=108 Identities=20% Similarity=0.282 Sum_probs=83.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE-------------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL------------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v------------------- 62 (115)
|.|+|+|++..+.. ..++... .....|.|.+++.+|+|.|.|.+.+..+.....+.|
T Consensus 37 ~~v~W~~~~~~~~~--~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~ 112 (317)
T 2y25_A 37 THIVWYKDEREISV--DEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALS 112 (317)
T ss_dssp CEEEEEETTEEECC--SCC-------CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEECCeEcCC--CCcEEEE--CCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCccccccCCceeccc
Confidence 68999999999876 5544332 345799999999999999999999887766554433
Q ss_pred ----------ec----------ccCCcEEEEEeCC---------------eEEEEEeccCCCCCeeeEEEeecCccceee
Q psy3272 63 ----------SV----------SVSDRRLMETRGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKK 107 (115)
Q Consensus 63 ----------~g----------~~~~~~~~~~~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~ 107 (115)
.| .|.+.+.|..++. ...|.|.++..+|.|.|+|.+.|..|....
T Consensus 113 g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 192 (317)
T 2y25_A 113 ATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQK 192 (317)
T ss_dssp BCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEE
Confidence 22 5788889987652 234999999999999999999999998877
Q ss_pred EEEEEE
Q psy3272 108 YMELSE 113 (115)
Q Consensus 108 ~~~l~v 113 (115)
.+.|.|
T Consensus 193 ~~~l~v 198 (317)
T 2y25_A 193 TVDLSG 198 (317)
T ss_dssp EEEECH
T ss_pred EEEEee
Confidence 776643
No 50
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.74 E-value=2e-17 Score=97.07 Aligned_cols=92 Identities=15% Similarity=0.277 Sum_probs=72.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEec-CCCCCCeEEEEEeecCCcceeE----------------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKN-VQSTDFGNYSCVADNNLGRAKK---------------------- 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~y~C~~~~~~~~~~~---------------------- 58 (115)
|.|+|+|+|..+.. . ....|.|.+ +..+|+|.|+|.+.+..+....
T Consensus 27 ~~i~W~k~g~~l~~--~---------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~ 95 (186)
T 1jbj_A 27 ENLKWEKNGQELPQ--K---------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDA 95 (186)
T ss_dssp TTCEEEETTEEECS--C---------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCCC
T ss_pred CceEEEECCEECCC--C---------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEeccccccccccccccc
Confidence 56999999999876 2 244799999 9999999999999876554211
Q ss_pred ----------------------------EEEE--ecccCCcEEEEEeCC--------eEEEEEeccCCCCCeeeEEEeec
Q psy3272 59 ----------------------------YMEL--SVSVSDRRLMETRGN--------KHTLTIKNVQSTDFGNYSCVADN 100 (115)
Q Consensus 59 ----------------------------~~~v--~g~~~~~~~~~~~~~--------~~~l~i~~~~~~d~G~y~C~~~n 100 (115)
.+.+ .. |.|.+.|.+++. ...|.|.++..+|+|.|+|.|.|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~-p~p~i~W~k~g~~i~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 174 (186)
T 1jbj_A 96 KKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL-TDKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAK 174 (186)
T ss_dssp SCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS-SCSCEEEEETTEECCCSSCCSSCCEEEETTSCCEEEEEEEESS
T ss_pred ccCCccccccccccccccccceecCCCCeEEEEeeC-CCCeEEEEECCEECcccCCCcceEEECCCCcCcCEEEEEEEEc
Confidence 1111 23 678899988763 34799999999999999999999
Q ss_pred Cccce
Q psy3272 101 NLGRA 105 (115)
Q Consensus 101 ~~~~~ 105 (115)
..|..
T Consensus 175 ~~g~~ 179 (186)
T 1jbj_A 175 ETSNP 179 (186)
T ss_dssp CEEEE
T ss_pred CcCCc
Confidence 99876
No 51
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.74 E-value=2.2e-17 Score=110.32 Aligned_cols=110 Identities=14% Similarity=0.112 Sum_probs=81.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEE-E-----eCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLME-T-----RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~-~-----~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v------------- 62 (115)
|.|+|++++..+.. ...+... . ......|.|.++..+|+|.|.|.+.+. ......|.|
T Consensus 258 p~i~W~k~g~~l~~--~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~-~~~~~~L~V~~~p~i~~~~~~~ 334 (527)
T 3qs9_E 258 FGLTWELENKALEE--GNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH-PSQSALVTIVEKGFINATNSSE 334 (527)
T ss_dssp CCEEEECSSSCCCG--GGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE-EEEEEEEEEC--CEEECCCSCC
T ss_pred eEEEEEECCEECCC--CceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC-CCceEEEEEEccCccccccCcc
Confidence 68999999987754 3222111 1 112456999999999999999999886 222223433
Q ss_pred ----------------ecccCCcEEEEEeCC-----------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ----------------SVSVSDRRLMETRGN-----------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~~~~-----------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++. ...|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 335 ~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~ 413 (527)
T 3qs9_E 335 DYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR 413 (527)
T ss_dssp EECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--
T ss_pred cEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 578999999988652 2379999999999999999999999998888888764
No 52
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.74 E-value=2.4e-17 Score=103.22 Aligned_cols=113 Identities=12% Similarity=0.068 Sum_probs=81.1
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEe---CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEE--E-----------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETR---GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YME--L----------- 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~--v----------- 62 (115)
.|.++|++++..+.. ......... ...+.|.|.....+|.|.|+|.+.+..+.... .+. |
T Consensus 147 ~~~i~W~~~~~~~~~--~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~ 224 (313)
T 4fqp_A 147 PAQITWHSDLGGMPN--TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGY 224 (313)
T ss_dssp CCEEEEEETTCCEEE--EEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECC
T ss_pred CcEEEeecCCccccc--cceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccc
Confidence 368999999876643 111100000 01346888888899999999999876543322 111 1
Q ss_pred -----------------ecccCC-cEEEEEeCC---------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 -----------------SVSVSD-RRLMETRGN---------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 -----------------~g~~~~-~~~~~~~~~---------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.| .+.|.+++. ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 225 ~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 304 (313)
T 4fqp_A 225 DNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKE 304 (313)
T ss_dssp CSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 578888 588988663 23799999999999999999999999999999888863
No 53
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.74 E-value=7.5e-17 Score=100.79 Aligned_cols=108 Identities=25% Similarity=0.352 Sum_probs=82.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEee-cCCcceeE---EEE--E-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVAD-NNLGRAKK---YME--L------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~-~~~~~~~~---~~~--v------------- 62 (115)
|.|+|+|++.++... ..++.. ....|.|.++..+|+|.|.|.+. +..+.... .+. +
T Consensus 139 ~~i~W~k~~~~l~~~-~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~ 213 (315)
T 1itb_B 139 PKLQWYKDCKPLLLD-NIHFSG----VKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 213 (315)
T ss_dssp CCCEEEETTEECCCC-SSSEEE----ETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECS
T ss_pred CEEEEEECCEECCCc-cceEee----cCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEec
Confidence 689999999988651 222221 24489999999999999999999 56555421 111 1
Q ss_pred --------------------ecccCCcEEEEEeCC---------------------------eEEEEEeccCCCC-Ceee
Q psy3272 63 --------------------SVSVSDRRLMETRGN---------------------------KHTLTIKNVQSTD-FGNY 94 (115)
Q Consensus 63 --------------------~g~~~~~~~~~~~~~---------------------------~~~l~i~~~~~~d-~G~y 94 (115)
.|.|.|.+.|.+++. ...|.|.++..+| .|.|
T Consensus 214 ~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y 293 (315)
T 1itb_B 214 PANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPF 293 (315)
T ss_dssp CCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCE
T ss_pred CCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCce
Confidence 568888899987542 1279999999999 9999
Q ss_pred EEEeecCccceeeEEEEEEe
Q psy3272 95 SCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 95 ~C~~~n~~~~~~~~~~l~v~ 114 (115)
+|.|.|..|.....+.|.|.
T Consensus 294 ~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 294 TCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EEEEECTTCCEEEEEEEECC
T ss_pred EEEEecCCCceeEEEEEEec
Confidence 99999999999999888774
No 54
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.74 E-value=3e-17 Score=102.29 Aligned_cols=108 Identities=25% Similarity=0.412 Sum_probs=79.1
Q ss_pred cceEEEECCEEeCCCC-CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee---EEEEE---------------
Q psy3272 2 GMMSWYQDTFLIEPSV-SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK---KYMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~---~~~~v--------------- 62 (115)
|.|.|++++..+.... ..++. ......|.|.++..+|+|.|.|.+.+..+... ..+.|
T Consensus 138 ~~v~W~k~~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~ 214 (304)
T 2yd9_A 138 PEITWFKDFLPVDPSASNGRIK---QLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMS 214 (304)
T ss_dssp CEEEEEETTEECCGGGGTTSEE---ECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCC
T ss_pred CeEEEEECCEECcCCCCcceEE---eCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCc
Confidence 6899999999876410 11222 12345899999999999999999998876543 22222
Q ss_pred ---------------ecccCCcEEEEEeCC-----------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ---------------SVSVSDRRLMETRGN-----------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ---------------~g~~~~~~~~~~~~~-----------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++. ...|.|.++ +|+|.|+|.|.|..|.....+.|.|.
T Consensus 215 ~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~ 290 (304)
T 2yd9_A 215 HEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVK 290 (304)
T ss_dssp BCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC--
T ss_pred eEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 568889999988652 224666555 69999999999999999999888875
No 55
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.73 E-value=6e-17 Score=100.28 Aligned_cols=108 Identities=20% Similarity=0.216 Sum_probs=82.6
Q ss_pred cceEEE-ECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCe-EEEEEeecCCcceeE---EEEE--------------
Q psy3272 2 GMMSWY-QDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFG-NYSCVADNNLGRAKK---YMEL-------------- 62 (115)
Q Consensus 2 p~v~W~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~y~C~~~~~~~~~~~---~~~v-------------- 62 (115)
|.|+|+ ++|..+.. ..++... ....|.|.++..+|+| .|.|.+.+..+.... .+.|
T Consensus 121 ~~v~W~~~~g~~l~~--~~~~~~~---~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~ 195 (290)
T 2o26_X 121 SQYSLIECDGKSLPT--DLTFVPN---PKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPE 195 (290)
T ss_dssp EEEEEEETTSCCCCT--TCEEEEE---TTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSC
T ss_pred ceEEEEeCCCcCCCC--CCceeeC---CCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCC
Confidence 789995 57777765 4444332 2357999999999999 999999987544222 3332
Q ss_pred -----------------ecccCCc-EEEEEeCCe----------------------EEEEEeccCCCCCeeeEEEeecCc
Q psy3272 63 -----------------SVSVSDR-RLMETRGNK----------------------HTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 63 -----------------~g~~~~~-~~~~~~~~~----------------------~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
.|.|.|. +.|.+++.. ..|.|.++..+|.|.|+|.|.|..
T Consensus 196 ~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~ 275 (290)
T 2o26_X 196 TSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTF 275 (290)
T ss_dssp SBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSS
T ss_pred CcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCC
Confidence 4677886 999876633 369999999999999999999999
Q ss_pred cceeeEEEEEEe
Q psy3272 103 GRAKKYMELSEL 114 (115)
Q Consensus 103 ~~~~~~~~l~v~ 114 (115)
|..+..+.|.|.
T Consensus 276 g~~~~~~~l~V~ 287 (290)
T 2o26_X 276 GSANVTTTLKVV 287 (290)
T ss_dssp CEEEEEEEECC-
T ss_pred CcEEEEEEEEEE
Confidence 999888888875
No 56
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.73 E-value=2.9e-17 Score=95.82 Aligned_cols=86 Identities=17% Similarity=0.287 Sum_probs=69.3
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeEEEE---E------------------ecccCCcEEEEEeCC-----eEEEE
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYME---L------------------SVSVSDRRLMETRGN-----KHTLT 82 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~---v------------------~g~~~~~~~~~~~~~-----~~~l~ 82 (115)
...|.|.+++.+|+|.|.|.+.+..+.....+. + .|.|.+.+.|..++. ...|.
T Consensus 67 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~l~V~~~~~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~ 146 (184)
T 2ny1_B 67 NFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLS 146 (184)
T ss_dssp BCCEEECSCCGGGCEEEEEEETTEEEEEEEEEEEEEESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEEESSEEE
T ss_pred eEEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEecCCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccccCceEEE
Confidence 456999999999999999999876443222111 1 467888999987653 34799
Q ss_pred EeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 83 IKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 83 i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
|.++..+|.|.|+|.|.|..+..+..+.|.|+
T Consensus 147 i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 147 VSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 99999999999999999999998888888886
No 57
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.72 E-value=4.2e-17 Score=98.88 Aligned_cols=85 Identities=20% Similarity=0.227 Sum_probs=64.6
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcce-------eEEEEE-------------------------------ecccCCcE
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRA-------KKYMEL-------------------------------SVSVSDRR 70 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~-------~~~~~v-------------------------------~g~~~~~~ 70 (115)
...|.|.+++.+|+|.|.|.+.+..+.. ...|.| .|.|.|.+
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v 168 (250)
T 2fbo_J 89 APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANV 168 (250)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEE
T ss_pred cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCee
Confidence 3579999999999999999999865532 113443 45688888
Q ss_pred EEEEeCC------------------------------------eEEEEEeccCCCCCeeeEEEeec---CccceeeEEEE
Q psy3272 71 LMETRGN------------------------------------KHTLTIKNVQSTDFGNYSCVADN---NLGRAKKYMEL 111 (115)
Q Consensus 71 ~~~~~~~------------------------------------~~~l~i~~~~~~d~G~y~C~~~n---~~~~~~~~~~l 111 (115)
.|.+++. ...|.|.++..+|.|.|+|.|.| ..+.....+.|
T Consensus 169 ~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 169 TWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp EEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred EEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEE
Confidence 9987631 14799999999999999999999 55556666666
Q ss_pred EE
Q psy3272 112 SE 113 (115)
Q Consensus 112 ~v 113 (115)
.|
T Consensus 249 ~V 250 (250)
T 2fbo_J 249 KV 250 (250)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 58
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.72 E-value=3e-16 Score=92.94 Aligned_cols=113 Identities=26% Similarity=0.378 Sum_probs=77.7
Q ss_pred cceEEEECCEEeCCCCC-CC-EEEEEeCCe---EEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE-----------
Q psy3272 2 GMMSWYQDTFLIEPSVS-DR-RLMETRGNK---HTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL----------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~-~~-~~~~~~~~~---~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v----------- 62 (115)
|.+.|++++..+..... .+ ......... ..|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 39 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~ 118 (212)
T 2v9r_A 39 PTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNP 118 (212)
T ss_dssp CEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCC
T ss_pred CEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCC
Confidence 68999999998764211 01 111111111 12345567899999999999987665422 3433
Q ss_pred ------------------ecccCCcEEEEEeCCe------------EEEEEeccCCCCCeeeEEEeecCccceee-EEEE
Q psy3272 63 ------------------SVSVSDRRLMETRGNK------------HTLTIKNVQSTDFGNYSCVADNNLGRAKK-YMEL 111 (115)
Q Consensus 63 ------------------~g~~~~~~~~~~~~~~------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~-~~~l 111 (115)
.|.|.+.+.|.+++.. ..|.|.++..+|.|.|+|.|.|..|.... .+.|
T Consensus 119 ~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l 198 (212)
T 2v9r_A 119 SDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAEL 198 (212)
T ss_dssp CCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEE
T ss_pred CceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEE
Confidence 3578888999876521 26999999999999999999999998655 4777
Q ss_pred EEe
Q psy3272 112 SEL 114 (115)
Q Consensus 112 ~v~ 114 (115)
.|.
T Consensus 199 ~V~ 201 (212)
T 2v9r_A 199 TVL 201 (212)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 59
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.72 E-value=2.9e-16 Score=93.69 Aligned_cols=109 Identities=21% Similarity=0.159 Sum_probs=74.6
Q ss_pred cceEEEEC---CEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE-------------
Q psy3272 2 GMMSWYQD---TFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL------------- 62 (115)
Q Consensus 2 p~v~W~~~---~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v------------- 62 (115)
|.|+|+++ +..+.. ..++.. .....|.|.+++.+|+|.|.|.+.+......+ .+.|
T Consensus 38 ~~v~w~~~~~~g~~~~~--~~~~~~---~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~ 112 (213)
T 2x1w_L 38 LNVSLCARYPEKRFVPD--GNRISW---DSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPS 112 (213)
T ss_dssp CCEEEEEETTTEEECCC--SSSCEE---ETTTEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESC
T ss_pred cEEEEEhhcCCCccccC--CCcccc---cCCccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCC
Confidence 67999984 555554 333322 13456999999999999999999764322211 2221
Q ss_pred -----------------eccc--CCcEEEEEeCC-----------------------eEEEEEeccCCCCCeeeEEEeec
Q psy3272 63 -----------------SVSV--SDRRLMETRGN-----------------------KHTLTIKNVQSTDFGNYSCVADN 100 (115)
Q Consensus 63 -----------------~g~~--~~~~~~~~~~~-----------------------~~~l~i~~~~~~d~G~y~C~~~n 100 (115)
.|.| .+.+.|.+.+. ...|.|.++..+|+|.|+|.|.|
T Consensus 113 ~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 192 (213)
T 2x1w_L 113 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 192 (213)
T ss_dssp SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEec
Confidence 3433 33577765432 12499999999999999999999
Q ss_pred CccceeeEEEEEEeC
Q psy3272 101 NLGRAKKYMELSELE 115 (115)
Q Consensus 101 ~~~~~~~~~~l~v~~ 115 (115)
..|..+..+.|.|.+
T Consensus 193 ~~g~~~~~~~l~V~~ 207 (213)
T 2x1w_L 193 GLMTKKNSTFVRVHE 207 (213)
T ss_dssp SSCEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999999998863
No 60
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.71 E-value=5.6e-16 Score=96.51 Aligned_cols=106 Identities=24% Similarity=0.348 Sum_probs=81.4
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE-EE-------------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK-YM------------------- 60 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~-~~------------------- 60 (115)
.|.|+|+|++.++.. ..++.+........|.|.+++.+|+|.|.|.+.+..+.... .+
T Consensus 31 ~~~v~W~k~~~~i~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~~~~~~~~~~~~~~~p~ 108 (312)
T 2y23_A 31 KSEFSWSKDYVSTED--SPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPT 108 (312)
T ss_dssp TCCEEEEETTEECTT--CTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHHHHHHHHHHHHHHHSCB
T ss_pred CcEEEEEECCEECCC--CCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEeeeeeeecccccCCCCc
Confidence 368999999999987 77887776667789999999999999999999875543321 11
Q ss_pred ---------EE------------e-cccCCcEEEEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecC
Q psy3272 61 ---------EL------------S-VSVSDRRLMETRGN-----------------KHTLTIKNVQSTDFGNYSCVADNN 101 (115)
Q Consensus 61 ---------~v------------~-g~~~~~~~~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~ 101 (115)
.+ . |.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|.
T Consensus 109 ~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 188 (312)
T 2y23_A 109 VPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDG 188 (312)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESS
T ss_pred cccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeC
Confidence 11 3 67888899987542 123999999999999999999886
Q ss_pred ccceeeE
Q psy3272 102 LGRAKKY 108 (115)
Q Consensus 102 ~~~~~~~ 108 (115)
.+.....
T Consensus 189 ~~~~~~~ 195 (312)
T 2y23_A 189 KATNHST 195 (312)
T ss_dssp SCEEEEE
T ss_pred CceEEEE
Confidence 5554433
No 61
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.71 E-value=3.5e-16 Score=98.70 Aligned_cols=107 Identities=18% Similarity=0.262 Sum_probs=80.7
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC--CcceeE------EEEE-----------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN--LGRAKK------YMEL----------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~--~~~~~~------~~~v----------- 62 (115)
|.|+|+|++..+... ..++... ...|.|.++..+|+|.|.|.+.+. .+.... .+.|
T Consensus 159 ~~i~W~k~~~~l~~~-~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~ 233 (329)
T 3oq3_B 159 NNITWYKNNQELIID-GTKYSQS----GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI 233 (329)
T ss_dssp CEEEEEETTEECCCS-SSSEEEE----TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE
T ss_pred ceEEEEECCccCCCC-CceEecC----CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee
Confidence 789999999988631 3343332 478999999999999999999975 322221 1222
Q ss_pred -------------------eccc---CC-cEEEEEeCC--------------------eEEEEEeccCCCCCe-eeEEEe
Q psy3272 63 -------------------SVSV---SD-RRLMETRGN--------------------KHTLTIKNVQSTDFG-NYSCVA 98 (115)
Q Consensus 63 -------------------~g~~---~~-~~~~~~~~~--------------------~~~l~i~~~~~~d~G-~y~C~~ 98 (115)
.|.| .+ .+.|.+++. ...|.|.++..+|.| .|+|.|
T Consensus 234 ~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a 313 (329)
T 3oq3_B 234 LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRG 313 (329)
T ss_dssp CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEE
T ss_pred cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEE
Confidence 4555 56 678876542 346999999999999 999999
Q ss_pred ecCccceeeEEEEEE
Q psy3272 99 DNNLGRAKKYMELSE 113 (115)
Q Consensus 99 ~n~~~~~~~~~~l~v 113 (115)
.|..|.....+.|.|
T Consensus 314 ~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 314 HNYYFDKTLTTTVVL 328 (329)
T ss_dssp ECSSCEEEEEEEEEE
T ss_pred EecCCceEEEEEEEe
Confidence 999999888888765
No 62
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.71 E-value=3.8e-16 Score=96.43 Aligned_cols=107 Identities=18% Similarity=0.288 Sum_probs=80.3
Q ss_pred ceEEEE-CCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC-CcceeE--EEEE----------------
Q psy3272 3 MMSWYQ-DTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN-LGRAKK--YMEL---------------- 62 (115)
Q Consensus 3 ~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~-~~~~~~--~~~v---------------- 62 (115)
.++|++ ++..+.. ..++... ....|.|.++..+|+|.|.|.+.+. .+.... .+.|
T Consensus 121 ~v~W~~~~~~~~~~--~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~ 195 (289)
T 3ejj_X 121 SVSLMREGGRQVLR--KTVYFFS---PWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSK 195 (289)
T ss_dssp SEEEEEGGGEECCT--TCCEEEE---TTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSS
T ss_pred EEEEEecCCeecCC--CccEEEC---CCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCc
Confidence 399987 6666655 5554432 3456999999999999999999843 222222 3332
Q ss_pred ---------------ec-ccCCcEEEEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEE
Q psy3272 63 ---------------SV-SVSDRRLMETRGN-----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 109 (115)
Q Consensus 63 ---------------~g-~~~~~~~~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~ 109 (115)
.| .|.+.+.|..++. ...|.|.++..+|.|.|+|.|.|..|..++.+
T Consensus 196 ~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~ 275 (289)
T 3ejj_X 196 LVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATM 275 (289)
T ss_dssp EECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEE
T ss_pred eEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccE
Confidence 34 6788889987652 45799999999999999999999999999998
Q ss_pred EEEEe
Q psy3272 110 ELSEL 114 (115)
Q Consensus 110 ~l~v~ 114 (115)
.|.+.
T Consensus 276 ~L~~~ 280 (289)
T 3ejj_X 276 NFQVV 280 (289)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 88764
No 63
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.71 E-value=1.7e-17 Score=98.02 Aligned_cols=110 Identities=23% Similarity=0.331 Sum_probs=79.3
Q ss_pred cceEEEECCEEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee--E--EEEE-----
Q psy3272 2 GMMSWYQDTFLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK--K--YMEL----- 62 (115)
Q Consensus 2 p~v~W~~~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~--~--~~~v----- 62 (115)
|.|.|++++..+ ......++... ...|.|.+++.+|+|.|.|.+.+..+... . .+.|
T Consensus 34 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~----~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~ 109 (209)
T 1nbq_A 34 PRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL----PTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPS 109 (209)
T ss_dssp EEEEEEEEETTEEEESEETTEECTTTTTTCEEE----TTEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCC
T ss_pred cEEEEEEcCCceeEEEEecCccCccccCceEee----ccEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCc
Confidence 689999987542 11113343332 27899999999999999999998644221 1 2222
Q ss_pred -----------------------ecccCCcEEEEEeCC----------------------eEEEEEeccCCCCCeeeEEE
Q psy3272 63 -----------------------SVSVSDRRLMETRGN----------------------KHTLTIKNVQSTDFGNYSCV 97 (115)
Q Consensus 63 -----------------------~g~~~~~~~~~~~~~----------------------~~~l~i~~~~~~d~G~y~C~ 97 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.
T Consensus 110 ~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 189 (209)
T 1nbq_A 110 KPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCE 189 (209)
T ss_dssp CCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEE
T ss_pred CCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEE
Confidence 457888999988641 24799999999999999999
Q ss_pred eecCccce--eeEEEEEEeC
Q psy3272 98 ADNNLGRA--KKYMELSELE 115 (115)
Q Consensus 98 ~~n~~~~~--~~~~~l~v~~ 115 (115)
|.|..|.. +..+.|.|.+
T Consensus 190 a~n~~g~~~~s~~v~l~V~d 209 (209)
T 1nbq_A 190 ARNGYGTPMTSNAVRMEAVE 209 (209)
T ss_dssp EECSSSCCEECCCBCCEEEC
T ss_pred EeCCcCcccccccEEEEEeC
Confidence 99999987 5566666653
No 64
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.71 E-value=1.8e-16 Score=109.82 Aligned_cols=110 Identities=22% Similarity=0.268 Sum_probs=86.7
Q ss_pred cceEEEECCEEeCCCCCCCEEEE-EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLME-TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
+.|+|+++|..+.. ...+... .......|.|.++..+|+|.|+|.+.|..+.... .+.|
T Consensus 650 ~~i~W~~~g~~l~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~ 727 (816)
T 3dmk_A 650 LNIDWTLDGQAISE--DLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFA 727 (816)
T ss_dssp CEEEEEETTBCCCG--GGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEE
T ss_pred CEEEEEECCeEcCC--CCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceec
Confidence 37999999998865 4343332 3345688999999999999999999998877665 2322
Q ss_pred -----------ecccCCcEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 63 -----------SVSVSDRRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 63 -----------~g~~~~~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.|.|.|.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+.+..
T Consensus 728 ~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~~~ 807 (816)
T 3dmk_A 728 QGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMIS 807 (816)
T ss_dssp TTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEEEE
T ss_pred CCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEEEE
Confidence 578999999988641 126999999999999999999999999888776654
No 65
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.71 E-value=7.5e-16 Score=89.69 Aligned_cols=102 Identities=18% Similarity=0.343 Sum_probs=76.7
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE--------------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL-------------------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v-------------------- 62 (115)
.+.|+|++..+.. .... .....|.|. ..+|+|.|.|.+.+.. .....+.|
T Consensus 31 ~~~W~k~~~~l~~--~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~~-~~~~~l~V~~~P~~~~~~~~~~~~~g~~ 100 (184)
T 3b5h_A 31 GHRWLKGGVVLKE--DALP-----GQKTEFKVD--SDDQWGEYSCVFLPEP-MGTANIQLHGPPRVKAVKSSEHINEGET 100 (184)
T ss_dssp EEEEESSSEEEEC--TTCC-----CSEEEEEEC--GGGCCEEEEEEEESTT-SCEEEEEECCSCCCEESCSEEEECTTSC
T ss_pred EEEEEeCCEEeec--cccc-----CCcEEEEEe--chhhCeEEEEEEECCc-CcEEEEEEecCCceeecCCCcEEcCCCc
Confidence 7999999998875 3221 124556665 5889999999998732 22224444
Q ss_pred -------eccc-CCcEEEEE---eCC------------------eEEEEEeccC-CCCCeeeEEEeecCccceeeEEEEE
Q psy3272 63 -------SVSV-SDRRLMET---RGN------------------KHTLTIKNVQ-STDFGNYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 63 -------~g~~-~~~~~~~~---~~~------------------~~~l~i~~~~-~~d~G~y~C~~~n~~~~~~~~~~l~ 112 (115)
.|.| .+.+.|.+ ++. ...|.|.++. .+|.|.|+|.|.|..|.....+.|.
T Consensus 101 ~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 180 (184)
T 3b5h_A 101 AMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 180 (184)
T ss_dssp EEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEE
Confidence 4677 78899988 221 1379999999 9999999999999999998888888
Q ss_pred Ee
Q psy3272 113 EL 114 (115)
Q Consensus 113 v~ 114 (115)
|.
T Consensus 181 V~ 182 (184)
T 3b5h_A 181 VR 182 (184)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 66
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.71 E-value=5.7e-16 Score=93.01 Aligned_cols=87 Identities=20% Similarity=0.170 Sum_probs=64.9
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE---------------------------ec-ccCCcEEEEEeCC--
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL---------------------------SV-SVSDRRLMETRGN-- 77 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v---------------------------~g-~~~~~~~~~~~~~-- 77 (115)
....|.|.+++.+|+|.|.|.+.+..+.....+.+ .| .|.|.+.|.+++.
T Consensus 81 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~ 160 (226)
T 4f80_A 81 GKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGEN 160 (226)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCB
T ss_pred CeEEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceE
Confidence 35789999999999999999999987776664444 33 5888999986431
Q ss_pred ---------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 ---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...+.+..+..+|.|.|+|.|.|..|..++.+.|.|.
T Consensus 161 ~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 161 IPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIA 212 (226)
T ss_dssp CCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCC
T ss_pred cCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEEC
Confidence 1134455778899999999999999999988888764
No 67
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=94.72 Aligned_cols=85 Identities=12% Similarity=0.123 Sum_probs=65.3
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------------------ecccCCcEEEEEeCC
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL----------------------------SVSVSDRRLMETRGN 77 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v----------------------------~g~~~~~~~~~~~~~ 77 (115)
...|.|.+++.+|+|.|.|.+.+..+.... .+.+ .|.|.|.+.|.+++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~ 157 (218)
T 4frw_A 78 DGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVK 157 (218)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSC
T ss_pred eEEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCc
Confidence 356999999999999999998765443333 1211 568889999987652
Q ss_pred ----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 78 ----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 78 ----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
...|.|..+...|.|.|+|.|.|..|..+..+.+.|
T Consensus 158 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 158 GTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp CEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred ccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 236999999999999999999999998666555543
No 68
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.70 E-value=1.5e-16 Score=97.41 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=67.6
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeE----EEEE-------------------------ecccCCcEEEEEeC---
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKK----YMEL-------------------------SVSVSDRRLMETRG--- 76 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~----~~~v-------------------------~g~~~~~~~~~~~~--- 76 (115)
...|.|.+++.+|+|.|.|.+.+..+.... .+.| .+.|.+.+.|.+.+
T Consensus 83 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~ 162 (268)
T 3mj6_A 83 DGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSH 162 (268)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECCCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTC
T ss_pred EEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEeccCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCC
Confidence 377999999999999999999875433322 3333 23577888998731
Q ss_pred ------------------------------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 77 ------------------------------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 77 ------------------------------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
....|.|.++..+|.|.|+|.|.|..+.....+.|.|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 236 (268)
T 3mj6_A 163 TEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVV 236 (268)
T ss_dssp SSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEE
Confidence 23479999999999999999999999998888888874
No 69
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.70 E-value=9.5e-17 Score=94.61 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=75.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc-e-e--EEEEEec-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR-A-K--KYMELSV------------- 64 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~-~--~~~~v~g------------- 64 (115)
|.+.|+|++..+.. ... ..........|.|.+++.+|+|.|.|.+.+..+. . . ..+.|.+
T Consensus 33 ~~~~w~k~g~~~~~--~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~ 109 (196)
T 3p2t_A 33 REYRLDKEESPAPW--DRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSP 109 (196)
T ss_dssp CEEEEEETTSCSCS--EEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCS
T ss_pred CEEEEEECCCCCcc--ccc-ccccCCceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcc
Confidence 67899999986653 110 0001135688999999999999999999987652 1 1 1333310
Q ss_pred ---------------ccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCcc----c-eeeE
Q psy3272 65 ---------------SVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNLG----R-AKKY 108 (115)
Q Consensus 65 ---------------~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~----~-~~~~ 108 (115)
.+.+.+.|.+++. ...|.|.++..+|+|.|+|.|.|..+ + .+..
T Consensus 110 ~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~ 189 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRSPMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDP 189 (196)
T ss_dssp EECTTCCEEEEEEEEEEEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCC
T ss_pred eecCCCeEEEEEecCCCCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCC
Confidence 1234566766542 24699999999999999999999986 2 4446
Q ss_pred EEEEEe
Q psy3272 109 MELSEL 114 (115)
Q Consensus 109 ~~l~v~ 114 (115)
+.|.|.
T Consensus 190 ~~l~V~ 195 (196)
T 3p2t_A 190 LELIVS 195 (196)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 667664
No 70
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.70 E-value=7.1e-16 Score=99.09 Aligned_cols=109 Identities=26% Similarity=0.376 Sum_probs=81.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--------------------E--
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--------------------Y-- 59 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--------------------~-- 59 (115)
|.+.|++++.++.. ..+.. .......|.|.++..+|+|.|.|.+.+..+.... .
T Consensus 133 ~~~~W~~~~~~~~~--~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~ 208 (384)
T 3kld_A 133 LSYAWIFNEYPSYQ--DNRRF--VSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIE 208 (384)
T ss_dssp EEEEEEETTEECCC--SSSEE--ECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEE
T ss_pred eEEEEEECCCCCEe--eccEE--EEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCcee
Confidence 57899999987754 33322 1234557999999999999999999886543210 0
Q ss_pred ------E------------EEecccCCcEEEEEeCC------------eEEEEEeccCCCCCeeeEEEeecCccceeeEE
Q psy3272 60 ------M------------ELSVSVSDRRLMETRGN------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 109 (115)
Q Consensus 60 ------~------------~v~g~~~~~~~~~~~~~------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~ 109 (115)
+ .+.|.|.|.+.|.+.+. ...|.|.++..+|+|.|+|.|.|..|......
T Consensus 209 ~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 288 (384)
T 3kld_A 209 VQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKG 288 (384)
T ss_dssp EECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred ecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEE
Confidence 0 11678999999987432 24799999999999999999999999977776
Q ss_pred EEEEe
Q psy3272 110 ELSEL 114 (115)
Q Consensus 110 ~l~v~ 114 (115)
.|.|.
T Consensus 289 ~l~v~ 293 (384)
T 3kld_A 289 QLTFY 293 (384)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66653
No 71
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.70 E-value=3.1e-16 Score=95.56 Aligned_cols=100 Identities=15% Similarity=0.241 Sum_probs=79.5
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE--------------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL-------------------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v-------------------- 62 (115)
.++|+|+|..+.. ....|.|.+++.+|+|.|.|.+.+..+.....+.|
T Consensus 33 ~~~W~~~g~~~~~------------~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l~v~~~~~~~~~~~~~~~~g~~v 100 (262)
T 3rjd_A 33 STQWFLNGTATQT------------STPSYRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPL 100 (262)
T ss_dssp CEEEEETTEECSC------------CSSEEEESSCCGGGCEEEEEEESSSCCCCCEEEEEECSSEEEEESCSEEETTSCE
T ss_pred eEEEEECCEEeec------------cCCeEEEecCCcccCeEEEEEEecCCccccEEEEEeccceEecCCCeEEecCCeE
Confidence 7999999998865 24568999999999999999998766554444444
Q ss_pred -------ecccCCcEEEEEeCC-------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 -------SVSVSDRRLMETRGN-------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 -------~g~~~~~~~~~~~~~-------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.+.|.+.+.|..++. ...|.|.++..+|.|.|+|.+.|..+.....+.|.|.
T Consensus 101 ~l~C~~~~~~p~~~v~W~~~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~ 166 (262)
T 3rjd_A 101 ALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVK 166 (262)
T ss_dssp EEEEEEGGGCCCEEEEEEETTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEE
T ss_pred EEEEEccCCCCCceEEEEECCccccccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEec
Confidence 235666788887653 2368999999999999999999999887777777664
No 72
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.70 E-value=4.1e-16 Score=104.21 Aligned_cols=107 Identities=13% Similarity=0.076 Sum_probs=78.3
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE--EEE----------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY--MEL---------------- 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~--~~v---------------- 62 (115)
.|.|+|+|+|.++.. ..+. ......|.|.++..+|+|.|+|.+.|..+..... |.|
T Consensus 355 ~p~i~W~k~g~~l~~--~~~~----~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~~~~l~ 428 (527)
T 3qs9_E 355 QIRCTWTFSRKSFPC--EQKG----LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASASQAS 428 (527)
T ss_dssp CCEEEEEETTEEEEC--BCCB----CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCCCE---
T ss_pred CCEEEEEECCEECcC--Cccc----ccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCCCCEEE
Confidence 378999999998865 3321 1245678999999999999999999988877663 333
Q ss_pred ---ecccCCcEEEEEeCC--------------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 63 ---SVSVSDRRLMETRGN--------------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 63 ---~g~~~~~~~~~~~~~--------------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.|.|.|.+.|.+.+. .....|.-...+|.|.|+|.|.|..|..+..+.|.|
T Consensus 429 C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V 508 (527)
T 3qs9_E 429 CFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNS 508 (527)
T ss_dssp EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC--
T ss_pred EEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEec
Confidence 578999999964321 112333333457999999999999999999888765
No 73
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.69 E-value=9.9e-16 Score=89.85 Aligned_cols=104 Identities=16% Similarity=0.239 Sum_probs=74.7
Q ss_pred cceEEEE--CCEEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE----EEEE---
Q psy3272 2 GMMSWYQ--DTFLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK----YMEL--- 62 (115)
Q Consensus 2 p~v~W~~--~~~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~----~~~v--- 62 (115)
|.|.|+| ++..+ +. ..++.+. ....|.|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 31 ~~i~W~k~~~~~~i~~~~~~~~~~~~--~~R~~~~---~ngsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 31 DDIKWEKTSDKKKIAQFRKEKETFKE--KDTYKLF---KNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQER 105 (182)
T ss_dssp EEEEEEEGGGCCEEEEECGGGCEEES--CTTEEEC---TTSCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECC
T ss_pred CEEEEEECCCCcEEEEEeCccCCCCC--CCeEEEC---CCCCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCc
Confidence 5799999 88776 22 4555442 3458999999999999999999887655422 3433
Q ss_pred -------------------ecccCCcEEEEEeCCeE-----EEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 63 -------------------SVSVSDRRLMETRGNKH-----TLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 -------------------~g~~~~~~~~~~~~~~~-----~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.+.|.+.+.|..++... .+.+.. ..+|.|.|+|.|.|..+.......+
T Consensus 106 ~~~P~i~~~~~~v~L~C~~~~~p~~~~~W~~~g~~l~~~~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~ 177 (182)
T 1hnf_A 106 VSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRVITHKW-TTSLSAKFKCTAGNKVSKESSVEPV 177 (182)
T ss_dssp CCCCEEEEETTTTEEEEECSSCSSCEEEEEESSCEEEEESSCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEE
T ss_pred CCCCEEEEccCcEEEEeEccCCCCCEEEEEECCEECCCCCcEEEEec-ccCCCcEEEEEEEeCCCCcEEccee
Confidence 34677889998876432 233332 4789999999999999997776554
No 74
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.69 E-value=1.4e-16 Score=94.75 Aligned_cols=105 Identities=17% Similarity=0.293 Sum_probs=76.3
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee-----------------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK----------------------- 57 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~----------------------- 57 (115)
.|.|.|+|+|..+.. . ......|.|.+++.+|+|.|.|.+.+......
T Consensus 29 ~~~i~W~k~g~~l~~--~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~~~~~~~~~~~~~~~ 99 (204)
T 1sy6_A 29 AKNITWFKDGKMIGF--L-------TEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSADDAKKDAAKKDDAK 99 (204)
T ss_dssp SSEEEEEETTEEEEE--E-------ESSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC-----------------
T ss_pred CCEEEEEECCEECCC--C-------CCCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEecccccccccccccccc
Confidence 378999999988764 1 12456799999999999999999754221000
Q ss_pred ----------------------EEEE-------E--ecccCCcEEEEEeCC--------------eEEEEEecc-CCCCC
Q psy3272 58 ----------------------KYME-------L--SVSVSDRRLMETRGN--------------KHTLTIKNV-QSTDF 91 (115)
Q Consensus 58 ----------------------~~~~-------v--~g~~~~~~~~~~~~~--------------~~~l~i~~~-~~~d~ 91 (115)
..+. + .|.|.|.+.|.+++. ...|.|.++ ..+|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~p~~v~~~G~~v~L~C~g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~ 179 (204)
T 1sy6_A 100 KDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQS 179 (204)
T ss_dssp -------------------CCCCEEEEETTEEEEECSCCCSSCEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHC
T ss_pred ccccccccccccccccceecCCceeeecCCcEEEEcCCCCCCceEEEECCEECCCccCCceEecCCCEEEEeeCCccccC
Confidence 0111 1 467888888987642 236999999 99999
Q ss_pred eeeEEEeecCccc-eeeEEEEEEe
Q psy3272 92 GNYSCVADNNLGR-AKKYMELSEL 114 (115)
Q Consensus 92 G~y~C~~~n~~~~-~~~~~~l~v~ 114 (115)
|.|+|.|.|..|. .+..+.|.|+
T Consensus 180 G~Y~C~A~N~~g~~~s~~l~l~~~ 203 (204)
T 1sy6_A 180 GYYVCYPRGSKPEDANFYLYLRAR 203 (204)
T ss_dssp EEEEEEETTSCGGGSSCEEEEEEC
T ss_pred EEEEEEeccCCCCceeEEEEEEEe
Confidence 9999999999997 3567666653
No 75
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.69 E-value=4.2e-16 Score=97.14 Aligned_cols=102 Identities=23% Similarity=0.294 Sum_probs=71.3
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEe--CCeEEEEEecCCC-CCCeEEEEEeecCCcceeE--EEEE--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETR--GNKHTLTIKNVQS-TDFGNYSCVADNNLGRAKK--YMEL-------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~-~d~G~y~C~~~~~~~~~~~--~~~v-------------- 62 (115)
|.|+|+|+|..+.. .++..... .....|.|.++.. +|+|.|.|.+.+..+.... .|.|
T Consensus 36 ~~i~W~k~g~~i~~---~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~ 112 (304)
T 2yd9_A 36 PRVTWNKKGKKVNS---QRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNID 112 (304)
T ss_dssp CEEEEC-------C---TTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEE
T ss_pred CeEEEEECCEECCC---CceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeee
Confidence 68999999988754 34333222 2347899999997 9999999999987665433 2322
Q ss_pred --------------------ecccCCcEEEEEeCC---------------eEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 63 --------------------SVSVSDRRLMETRGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 63 --------------------~g~~~~~~~~~~~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..|...
T Consensus 113 ~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 191 (304)
T 2yd9_A 113 MGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRY 191 (304)
T ss_dssp ECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred cCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEE
Confidence 457788889987642 12699999999999999999999998754
No 76
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.69 E-value=1.3e-16 Score=100.98 Aligned_cols=106 Identities=22% Similarity=0.418 Sum_probs=66.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC-cce---eE--EEEE-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL-GRA---KK--YMEL------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~-~~~---~~--~~~v------------- 62 (115)
|.|+|+|++.++.. ..++.. .+..|.|.++..+|+|.|.|.+.+.. +.. .. .+.|
T Consensus 155 ~~v~W~k~~~~l~~--~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~ 228 (349)
T 4dep_C 155 PTITWYMGCYKIQN--FNNVIP----EGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIH 228 (349)
T ss_dssp CEEEEEETTEECCS--CSSEEE----ETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC
T ss_pred ceEEEeeCCEECCC--ccceee----cCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEe
Confidence 68999999998865 444332 23679999999999999999998865 332 12 2222
Q ss_pred ----------------------e----cccCCcEEEEEeCC-------------------------eEEEEEeccCCCCC
Q psy3272 63 ----------------------S----VSVSDRRLMETRGN-------------------------KHTLTIKNVQSTDF 91 (115)
Q Consensus 63 ----------------------~----g~~~~~~~~~~~~~-------------------------~~~l~i~~~~~~d~ 91 (115)
. |.|.+.+.|.+++. ...|.|.++..+|.
T Consensus 229 ~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 308 (349)
T 4dep_C 229 SPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDL 308 (349)
T ss_dssp ----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC----------
T ss_pred cCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHc
Confidence 2 35778888876542 12399999999999
Q ss_pred -eeeEEEeecCccceeeEEEEEE
Q psy3272 92 -GNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 92 -G~y~C~~~n~~~~~~~~~~l~v 113 (115)
|.|+|.|.|..|.....+.|.|
T Consensus 309 ~G~Y~C~a~N~~G~~~~~~~l~v 331 (349)
T 4dep_C 309 KRSYVCHARSAKGEVAKAAKVKQ 331 (349)
T ss_dssp ---CEEEEECSSCEEEEECC---
T ss_pred CCcEEEEEEcCCCcEEEEEEEee
Confidence 9999999999999888777765
No 77
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.69 E-value=8.4e-18 Score=104.91 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=80.0
Q ss_pred CcceEEEECCEEeCCCCCCCEEE-EEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEE--E-------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLM-ETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YME--L------------- 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~-~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~--v------------- 62 (115)
.|.|+|++++.++.. ...... ........|.|..+..+|.|.|+|.+.+..+.... .+. |
T Consensus 144 ~~~i~W~~~~~~~~~--~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~ 221 (308)
T 4fom_A 144 VAHIDWEGDLGEMES--TTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDG 221 (308)
T ss_dssp CCEEEECCCSSBCCE--EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCS
T ss_pred CceEEEEECCccccc--ccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccce
Confidence 368999999876643 110000 00112357899999999999999999986544332 222 2
Q ss_pred ---------------ecccCC-cEEEEEeCC----------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 ---------------SVSVSD-RRLMETRGN----------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ---------------~g~~~~-~~~~~~~~~----------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.| .+.|.+++. ...+.|.++..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 222 ~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~ 300 (308)
T 4fom_A 222 NWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISD 300 (308)
T ss_dssp CEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEEC
T ss_pred eeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEc
Confidence 567777 577876542 23567889999999999999999999998888888763
No 78
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.69 E-value=3.3e-16 Score=100.62 Aligned_cols=110 Identities=23% Similarity=0.279 Sum_probs=81.7
Q ss_pred cceEEEECCEEeCCCC-CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE---------------
Q psy3272 2 GMMSWYQDTFLIEPSV-SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v--------------- 62 (115)
|.++|+|++..+.... ..+.. ......|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 151 ~~v~W~~~~~~~~~~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~ 227 (403)
T 3laf_A 151 PTIHWQKNQQDLNPIPGDSRVV---VLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQR 227 (403)
T ss_dssp CEEEEEESSSBCCCCTTCCSEE---ECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEEC
T ss_pred CeEEEEECCEeccccCCceEEE---EcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecC
Confidence 5899999998774311 22222 234567999999999999999999876544221 2222
Q ss_pred ------------------ecccCCcEEEEEeCC-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 63 ------------------SVSVSDRRLMETRGN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 ------------------~g~~~~~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..|..+..+.|
T Consensus 228 ~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 307 (403)
T 3laf_A 228 PSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAEL 307 (403)
T ss_dssp CCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEE
Confidence 457888889987552 1369999999999999999999999988888777
Q ss_pred EEe
Q psy3272 112 SEL 114 (115)
Q Consensus 112 ~v~ 114 (115)
.|.
T Consensus 308 ~V~ 310 (403)
T 3laf_A 308 TVL 310 (403)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 79
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.69 E-value=5.4e-16 Score=102.90 Aligned_cols=109 Identities=17% Similarity=0.236 Sum_probs=82.6
Q ss_pred eEEEECCEEe--CCCCCCCEEEE---EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE--------------
Q psy3272 4 MSWYQDTFLI--EPSVSDRRLME---TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL-------------- 62 (115)
Q Consensus 4 v~W~~~~~~~--~~~~~~~~~~~---~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v-------------- 62 (115)
|+|++++..+ .. ..+.... .......|.|.++..+|+|.|.|.+.+..+.... .|.|
T Consensus 244 i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~ 321 (524)
T 2ec8_A 244 STWKRENSQTKLQE--KYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINT 321 (524)
T ss_dssp EEEEETTCSCCCCE--EEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCS
T ss_pred EEEEeCCCCCcccc--ccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCc
Confidence 9999999873 22 1111111 0123578999999999999999999988776655 3333
Q ss_pred ----------------ecccCCc-EEEEEeCC--------------------eEEEEEeccCCCCCeeeEEEeecCccce
Q psy3272 63 ----------------SVSVSDR-RLMETRGN--------------------KHTLTIKNVQSTDFGNYSCVADNNLGRA 105 (115)
Q Consensus 63 ----------------~g~~~~~-~~~~~~~~--------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~ 105 (115)
.|.|.|. +.|.+++. ...|.|.++..+|.|.|+|.|.|..|..
T Consensus 322 ~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 401 (524)
T 2ec8_A 322 TVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNA 401 (524)
T ss_dssp EEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred eEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceE
Confidence 5678888 99987542 2479999999999999999999999998
Q ss_pred eeEEEEEEe
Q psy3272 106 KKYMELSEL 114 (115)
Q Consensus 106 ~~~~~l~v~ 114 (115)
+..+.|.|.
T Consensus 402 ~~~~~l~V~ 410 (524)
T 2ec8_A 402 AIAFNVYVN 410 (524)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEe
Confidence 888888764
No 80
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.68 E-value=1.9e-15 Score=93.35 Aligned_cols=102 Identities=24% Similarity=0.417 Sum_probs=76.8
Q ss_pred cceEEEE-CCEEeCCCCCCCEEEE-EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE--------------
Q psy3272 2 GMMSWYQ-DTFLIEPSVSDRRLME-TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL-------------- 62 (115)
Q Consensus 2 p~v~W~~-~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v-------------- 62 (115)
|.|+|++ +|..+... ..++... .......|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 33 ~~i~W~~~~g~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~ 111 (291)
T 1qz1_A 33 KDISWFSPNGEKLSPN-QQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQE 111 (291)
T ss_dssp CEEEEECTTSCBCCSS-CSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEE
T ss_pred cEeEEECCCCeECccC-CceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCccc
Confidence 6899999 77766541 3444432 2356789999999999999999999987754322 3333
Q ss_pred -------------ecccCCcEEEEEeCC--------------eEEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 63 -------------SVSVSDRRLMETRGN--------------KHTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 63 -------------~g~~~~~~~~~~~~~--------------~~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..+.
T Consensus 112 ~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 180 (291)
T 1qz1_A 112 FKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARG 180 (291)
T ss_dssp EETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred ccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCC
Confidence 467888899987652 236999999999999999999997644
No 81
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.68 E-value=6.5e-17 Score=102.82 Aligned_cols=109 Identities=20% Similarity=0.248 Sum_probs=82.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCe-EEEEEeecCCcceeEE---------------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFG-NYSCVADNNLGRAKKY--------------------- 59 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~y~C~~~~~~~~~~~~--------------------- 59 (115)
|.|.|++++..+... ... ........|.|.+++.+|+| .|.|.+.+..+.....
T Consensus 188 p~i~W~~~~~~~~~~-~~~---~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i~~~~~~~g~~ 263 (347)
T 2ifg_A 188 EQAGWILTELEQSAT-VMK---SGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHH 263 (347)
T ss_dssp CCCCEEESCCCSSEE-ECC---CCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEEEECCCEESSS
T ss_pred CEEEEEcCCceeecc-ccc---ceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCeeeeccCccCce
Confidence 689999998654321 000 01235778999999999999 9999998765443321
Q ss_pred ----EEEecccCCcEEEEEeCC----------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 60 ----MELSVSVSDRRLMETRGN----------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 60 ----~~v~g~~~~~~~~~~~~~----------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
..+.|.|.|.+.|.+++. ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|
T Consensus 264 v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 343 (347)
T 2ifg_A 264 WCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAF 343 (347)
T ss_dssp EEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECS
T ss_pred EEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEe
Confidence 112678999999987542 234999999999999999999999999999988877
Q ss_pred e
Q psy3272 114 L 114 (115)
Q Consensus 114 ~ 114 (115)
.
T Consensus 344 ~ 344 (347)
T 2ifg_A 344 M 344 (347)
T ss_dssp C
T ss_pred c
Confidence 5
No 82
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.68 E-value=9.8e-16 Score=103.77 Aligned_cols=102 Identities=23% Similarity=0.403 Sum_probs=81.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---------------- 62 (115)
|.++|+++|..++. ..++... .....|.|.++..+|+|.|.|.+.+..+...+ .+.|
T Consensus 318 ~~v~W~~~g~~l~~--~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~ 393 (642)
T 1e07_A 318 TTYLWWVNNQSLPV--SPRLQLS--NDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYY 393 (642)
T ss_pred ccEEEEECCccCCC--cCCEEEe--CCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEe
Confidence 57999999998876 5555442 34578999999999999999999988765432 3333
Q ss_pred ------------ecccCCcEEEEEeCC----eEEEEEeccCCCCCeeeEEEeecCccceee
Q psy3272 63 ------------SVSVSDRRLMETRGN----KHTLTIKNVQSTDFGNYSCVADNNLGRAKK 107 (115)
Q Consensus 63 ------------~g~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~ 107 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|....
T Consensus 394 ~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 454 (642)
T 1e07_A 394 RPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSR 454 (642)
T ss_pred cCCCcEEEEEEcCccCCCeEEEEECCEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcc
Confidence 467888999988763 357999999999999999999999987544
No 83
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.67 E-value=2.4e-16 Score=92.91 Aligned_cols=98 Identities=12% Similarity=0.139 Sum_probs=68.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee----EEEEE---------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK----KYMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~----~~~~v--------------- 62 (115)
+.+.|+|++..+.. ... ..........|.|.+++.+|+|.|.|.+.+..+... ..|.|
T Consensus 33 ~~~~W~k~g~~~~~--~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~~~ 109 (196)
T 2d3v_A 33 QEYRLVKEGSPEPW--DTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPSP 109 (196)
T ss_dssp CEEEEEETTCSSCS--EEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC----
T ss_pred cEEEEEECCCCCCc--ccc-cccCCccccEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccCCc
Confidence 46899999986643 100 000123578899999999999999999987654221 13333
Q ss_pred --------------ecccCCcEEEEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 63 --------------SVSVSDRRLMETRGN-----------------KHTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 63 --------------~g~~~~~~~~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
.|.| +.+.|.+++. ...|.|.+++.+|.|.|+|.|.|..+
T Consensus 110 ~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 110 VVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp -------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred cccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 3355 7788877542 15799999999999999999999765
No 84
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.66 E-value=3.3e-16 Score=99.81 Aligned_cols=102 Identities=12% Similarity=0.101 Sum_probs=77.9
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
.|.|+|++++..+.. ....|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 125 ~~~v~W~~~~~~~~~------------~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~~~~~G~ 192 (363)
T 1wio_A 125 SPSVQCRSPRGKNIQ------------GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGE 192 (363)
T ss_dssp CCCEEEECSSSCEEE------------ESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSEEEEEEETBC
T ss_pred CCeEEEEcCCCcccc------------cceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCCCceEEecCC
Confidence 368999998754321 3568999999999999999999876554443 2322
Q ss_pred --------ec-----ccCCcEEEEEeCC---------------------------------eEEEEEeccCCCCCeeeEE
Q psy3272 63 --------SV-----SVSDRRLMETRGN---------------------------------KHTLTIKNVQSTDFGNYSC 96 (115)
Q Consensus 63 --------~g-----~~~~~~~~~~~~~---------------------------------~~~l~i~~~~~~d~G~y~C 96 (115)
.| .|.|.+.|.+++. ...|.|.++..+|+|.|+|
T Consensus 193 ~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 272 (363)
T 1wio_A 193 QVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNL 272 (363)
T ss_dssp CEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEE
T ss_pred EEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEE
Confidence 33 5677888876541 2279999999999999999
Q ss_pred EeecC--ccceeeEEEEEEe
Q psy3272 97 VADNN--LGRAKKYMELSEL 114 (115)
Q Consensus 97 ~~~n~--~~~~~~~~~l~v~ 114 (115)
.|.|. .|.....+.|.|.
T Consensus 273 ~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 273 TLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp EECBTTTTCCEEEEEEEEEE
T ss_pred EEEEhhhcCeEEEEEeEEEE
Confidence 99999 8988888888774
No 85
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.66 E-value=5.1e-15 Score=88.26 Aligned_cols=108 Identities=19% Similarity=0.245 Sum_probs=78.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEec---------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSV--------------- 64 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g--------------- 64 (115)
|.|.|+|+|..+......++.+........|.|.++..+|+|.|.|.+.|..+.... .+.|.+
T Consensus 48 p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~~~~~~~~ 127 (215)
T 3mtr_A 48 ATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSIDQVEPYSS 127 (215)
T ss_dssp CEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCEEEEEEEETT
T ss_pred CEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCcceEEEEecc
Confidence 689999999998763235666655567889999999999999999999998887766 343311
Q ss_pred --------------ccCCc--EEEEEeCCe---------------EEEEEeccCCCCCeeeEEEeecCccceeeEE
Q psy3272 65 --------------SVSDR--RLMETRGNK---------------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 109 (115)
Q Consensus 65 --------------~~~~~--~~~~~~~~~---------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~ 109 (115)
.|... +.|...+.. ..+.|.++...+.|.|+|.|.|..|....+.
T Consensus 128 ~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~ 203 (215)
T 3mtr_A 128 TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISA 203 (215)
T ss_dssp EEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCC
T ss_pred eEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCccc
Confidence 11111 222222210 4689999999999999999999999855433
No 86
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.66 E-value=3e-15 Score=92.49 Aligned_cols=101 Identities=25% Similarity=0.403 Sum_probs=78.4
Q ss_pred cceEEEE-CCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE---------------
Q psy3272 2 GMMSWYQ-DTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v--------------- 62 (115)
+.|.|++ +|..+.. ..++..........|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 33 ~~v~W~~~~g~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v 110 (291)
T 2wim_A 33 ESIDWYNPQGEKIIS--TQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEF 110 (291)
T ss_dssp SEEECBCTTCCBCCC--BTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEE
T ss_pred CceEEECCCCcCccC--CCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhh
Confidence 4799999 6777766 66776666666789999999999999999999987766533 3433
Q ss_pred ------------ecccCCcEEEEEeCC--------------eEEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 63 ------------SVSVSDRRLMETRGN--------------KHTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 63 ------------~g~~~~~~~~~~~~~--------------~~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.|.|.+.+.|..++. ...|.|.++..+|.|.|+|.+.|..+.
T Consensus 111 ~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~ 178 (291)
T 2wim_A 111 KQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARG 178 (291)
T ss_dssp ETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTT
T ss_pred cCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCC
Confidence 456778888876542 225999999999999999999998754
No 87
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.66 E-value=3.9e-16 Score=92.75 Aligned_cols=85 Identities=15% Similarity=0.186 Sum_probs=62.4
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------------------ecccCCcEEEEEeCC
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL----------------------------SVSVSDRRLMETRGN 77 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v----------------------------~g~~~~~~~~~~~~~ 77 (115)
...|.|.+++.+|+|.|.|.+.+..+.... .+.+ .+.|.+.+.|..++.
T Consensus 82 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~ 161 (225)
T 4fmk_A 82 DATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLG 161 (225)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSC
T ss_pred cEEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCc
Confidence 467999999999999999999876554443 1222 346777777765432
Q ss_pred ------------------eEEEEEeccCCCCCeeeEEEeecCccceee--EEEEEE
Q psy3272 78 ------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSE 113 (115)
Q Consensus 78 ------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~--~~~l~v 113 (115)
.+.|.|..+...|.|.|+|.|.|..+.... .+.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V 217 (225)
T 4fmk_A 162 GEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSV 217 (225)
T ss_dssp CEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCB
T ss_pred cccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEE
Confidence 135999999999999999999999887544 444443
No 88
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.65 E-value=7.5e-16 Score=92.53 Aligned_cols=110 Identities=15% Similarity=0.094 Sum_probs=72.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeE--EEEEecCCCCCCeEEEEEeecCCccee----EEEEE-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKH--TLTIKNVQSTDFGNYSCVADNNLGRAK----KYMEL------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~y~C~~~~~~~~~~----~~~~v------------- 62 (115)
|.+.|+|+|..+.. .... ........ .|.|.+++.+|+|.|.|.+.+..+... ..+.|
T Consensus 37 ~~~~W~k~g~~~~~--~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p 113 (218)
T 1uct_A 37 YLTQLMIIKNSTYR--EIGR-RLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADR 113 (218)
T ss_dssp SEEEEEEEETTEEE--ECSE-ECC----CCCEEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESS
T ss_pred CEEEEEECCCcccc--cccc-cCCCCcceeeEEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCC
Confidence 67999999875543 1110 00011234 899999999999999999998643211 13333
Q ss_pred ----------------ecccCCcEEEEEeCC-----------eEEEEEeccCCCCCeeeEEEeecCcc-----ceeeEEE
Q psy3272 63 ----------------SVSVSDRRLMETRGN-----------KHTLTIKNVQSTDFGNYSCVADNNLG-----RAKKYME 110 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~~~~-----------~~~l~i~~~~~~d~G~y~C~~~n~~~-----~~~~~~~ 110 (115)
.+.+.+.+.|.+++. ...|.|.+++.+|+|.|+|.|.|... ..+..+.
T Consensus 114 ~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~ 193 (218)
T 1uct_A 114 GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALE 193 (218)
T ss_dssp CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCSEEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEE
T ss_pred CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcccccccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEE
Confidence 224556778877652 35799999999999999999998632 2334566
Q ss_pred EEEe
Q psy3272 111 LSEL 114 (115)
Q Consensus 111 l~v~ 114 (115)
|.|.
T Consensus 194 l~V~ 197 (218)
T 1uct_A 194 LVVT 197 (218)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6653
No 89
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.65 E-value=3.9e-16 Score=98.06 Aligned_cols=86 Identities=16% Similarity=0.263 Sum_probs=70.4
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeEE--EEE----------------------------ecccCCc-EEEEEeCC
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKY--MEL----------------------------SVSVSDR-RLMETRGN 77 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~--~~v----------------------------~g~~~~~-~~~~~~~~ 77 (115)
...|.|..+..+|.|.|+|.+.+..+..... +.| .|.|.|. +.|..++.
T Consensus 193 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~ 272 (331)
T 3u83_A 193 ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNG 272 (331)
T ss_dssp EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTB
T ss_pred EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCC
Confidence 3568899999999999999999887655442 222 5688887 99988653
Q ss_pred ---------eEEEEEe-ccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 ---------KHTLTIK-NVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ---------~~~l~i~-~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|. ++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 273 ~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 273 SLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319 (331)
T ss_dssp SCCTTEEEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCB
T ss_pred cccccceecCcEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEe
Confidence 2479999 899999999999999999999999888875
No 90
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.65 E-value=2.5e-15 Score=95.76 Aligned_cols=112 Identities=12% Similarity=0.135 Sum_probs=80.1
Q ss_pred cceEEEECCEEeCCC------CCCCEEEEE----------eCCeEEEEEecCCCCCCeEEEEEeecC--CcceeE--EEE
Q psy3272 2 GMMSWYQDTFLIEPS------VSDRRLMET----------RGNKHTLTIKNVQSTDFGNYSCVADNN--LGRAKK--YME 61 (115)
Q Consensus 2 p~v~W~~~~~~~~~~------~~~~~~~~~----------~~~~~~l~i~~~~~~d~G~y~C~~~~~--~~~~~~--~~~ 61 (115)
|.|+|+++|..+... ...++.... ......|.|.++..+|+|.|.|.+.+. .+.... .+.
T Consensus 211 p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~ 290 (363)
T 1wio_A 211 GELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLV 290 (363)
T ss_dssp EEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEE
T ss_pred eeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEE
Confidence 689999999876541 022232221 112448999999999999999999998 776555 333
Q ss_pred E--------------ecccCCc--EEEEEeCC----eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 62 L--------------SVSVSDR--RLMETRGN----KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 62 v--------------~g~~~~~--~~~~~~~~----~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
| .|.|.|. +.|.+++. ...|.|.++..+|.|.|+|.|.|. |.......+.|.
T Consensus 291 V~~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 291 VMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp EEEECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEEESSSEEEESSCCSEEEEEEECSS-SSCCEEEEEEEC
T ss_pred EEEecCCCeeEEEEEccccCCCccEEEEeCCCceeeeeeeeeeeeccccceeEEEEEecC-CeEEEecceEec
Confidence 3 5677887 89988763 346889999999999999999974 454555556553
No 91
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.65 E-value=1.7e-15 Score=95.58 Aligned_cols=109 Identities=17% Similarity=0.166 Sum_probs=79.2
Q ss_pred cceEEEECCEEe--CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE---------------
Q psy3272 2 GMMSWYQDTFLI--EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~--~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v--------------- 62 (115)
|.|.|+|++..+ ......++.. ....|.|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 55 ~~v~W~k~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~ 130 (339)
T 3o4o_C 55 INLTWHKNDSARTVPGEEETRMWA----QDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQ 130 (339)
T ss_dssp CBCCCEESSCCSCCSCCSSSCEEE----ETTEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEE
T ss_pred ceEEEEECCCCcccCccccccEEe----eCCeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccce
Confidence 589999999874 3311223322 2457999999999999999999987765544 3443
Q ss_pred -------------------ecccCCcEEEEEeCC--------------eEEEEEeccCCCCCeeeEEEeecCccc----e
Q psy3272 63 -------------------SVSVSDRRLMETRGN--------------KHTLTIKNVQSTDFGNYSCVADNNLGR----A 105 (115)
Q Consensus 63 -------------------~g~~~~~~~~~~~~~--------------~~~l~i~~~~~~d~G~y~C~~~n~~~~----~ 105 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..|. .
T Consensus 131 ~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 210 (339)
T 3o4o_C 131 ILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNI 210 (339)
T ss_dssp EEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEE
T ss_pred EEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEE
Confidence 235677888887652 137999999999999999999998873 4
Q ss_pred eeEEEEEEe
Q psy3272 106 KKYMELSEL 114 (115)
Q Consensus 106 ~~~~~l~v~ 114 (115)
...+.|.|.
T Consensus 211 ~~~~~l~V~ 219 (339)
T 3o4o_C 211 TRSIELRIK 219 (339)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 556666664
No 92
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.64 E-value=4.6e-15 Score=102.80 Aligned_cols=101 Identities=27% Similarity=0.422 Sum_probs=81.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.|+|+|+|..+.. ....|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 373 ~~v~W~k~g~~~~~------------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~ 440 (816)
T 3dmk_A 373 KTVSWMKDGKAIGH------------SESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEET 440 (816)
T ss_dssp CEEEEEETTEECSC------------CSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEE
T ss_pred CEEEEEECCEECCC------------CCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceE
Confidence 68999999998865 2356999999999999999999987665443 2322
Q ss_pred -------------ecccCCcEEEEEeCC--------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEE
Q psy3272 63 -------------SVSVSDRRLMETRGN--------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 109 (115)
Q Consensus 63 -------------~g~~~~~~~~~~~~~--------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~ 109 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+
T Consensus 441 v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 520 (816)
T 3dmk_A 441 MEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSA 520 (816)
T ss_dssp ECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEE
T ss_pred EcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEE
Confidence 568888999987542 12599999999999999999999999988888
Q ss_pred EEEEe
Q psy3272 110 ELSEL 114 (115)
Q Consensus 110 ~l~v~ 114 (115)
.|.|.
T Consensus 521 ~l~V~ 525 (816)
T 3dmk_A 521 KLNVY 525 (816)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77764
No 93
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.64 E-value=9.2e-15 Score=85.71 Aligned_cols=110 Identities=16% Similarity=0.159 Sum_probs=73.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce----eEEEEEe--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA----KKYMELS-------------- 63 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~----~~~~~v~-------------- 63 (115)
+.+.|+|+|..+....... ........|.|.+++.+|+|.|.|.+.+..+.. ...+.|.
T Consensus 32 ~~~~w~k~g~~~~~~~~~~---~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~~ 108 (188)
T 1oll_A 32 VEYQLHFEGSLFAVDRPKP---PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGP 108 (188)
T ss_dssp CEEEEEETTEEEEEECCSS---CTTCCEEEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEESCS
T ss_pred CEEEEEECCCccccccccc---CCCcceeEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECCCC
Confidence 4689999998764210000 011346789999999999999999997643211 1133321
Q ss_pred --------------cccCCcEEEEEeCC-----------eEEEEEeccCCCCCeeeEEEeecCcc---ceeeEEEEEEe
Q psy3272 64 --------------VSVSDRRLMETRGN-----------KHTLTIKNVQSTDFGNYSCVADNNLG---RAKKYMELSEL 114 (115)
Q Consensus 64 --------------g~~~~~~~~~~~~~-----------~~~l~i~~~~~~d~G~y~C~~~n~~~---~~~~~~~l~v~ 114 (115)
..+.+.+.|.+++. ...|.|.++..+|+|.|+|.|.|... ..+..+.|.|.
T Consensus 109 ~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 109 EVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EEETTCEEEEEEECSSSCSEEEEEEESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred ccccCCEEEEEEEcCCCCCEEEEEECCccccccccCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 12345677877652 35799999999999999999998642 24446677664
No 94
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.64 E-value=1.6e-15 Score=93.70 Aligned_cols=108 Identities=19% Similarity=0.216 Sum_probs=75.2
Q ss_pred cceEEEEC-CEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE---------------
Q psy3272 2 GMMSWYQD-TFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v--------------- 62 (115)
|.|+|+++ +..+.. ..++.. .....|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 120 ~~v~W~~~~~~~~~~--~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~ 194 (292)
T 4dkd_C 120 AGVSLVRVRGRPLMR--HTNYSF---SPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPA 194 (292)
T ss_dssp SSEEEEEGGGCCCCS--SCCEEC---CSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESS
T ss_pred eeEEEEecCCCcccc--CCcccc---cCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCC
Confidence 67999997 455544 333332 22344999999999999999999976554322 3333
Q ss_pred ----------------ecccCC-cEEEEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecCccceeeE
Q psy3272 63 ----------------SVSVSD-RRLMETRGN-----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKY 108 (115)
Q Consensus 63 ----------------~g~~~~-~~~~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~ 108 (115)
.|.|.+ .+.|..++. ...|.|.++..+|.|.|+|.|.|..|..+..
T Consensus 195 ~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~ 274 (292)
T 4dkd_C 195 ELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTS 274 (292)
T ss_dssp CBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEE
T ss_pred ceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeE
Confidence 233332 333433321 1379999999999999999999999999998
Q ss_pred EEEEEe
Q psy3272 109 MELSEL 114 (115)
Q Consensus 109 ~~l~v~ 114 (115)
+.|.|.
T Consensus 275 ~~l~V~ 280 (292)
T 4dkd_C 275 MFFRVV 280 (292)
T ss_dssp EEECC-
T ss_pred EEEEEe
Confidence 888875
No 95
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.64 E-value=6.2e-15 Score=87.57 Aligned_cols=111 Identities=22% Similarity=0.338 Sum_probs=76.0
Q ss_pred cceEEEECC--EEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----
Q psy3272 2 GMMSWYQDT--FLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---- 62 (115)
|.|.|+|++ ..+ ......++..........|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 31 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~ 110 (213)
T 3d9a_L 31 NNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRAD 110 (213)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCC
T ss_pred CCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCC
Confidence 679999853 211 111135666555556779999999999999999999876543211 2322
Q ss_pred --------------------------ec-ccCC-cEEEEEeCC----------------------eEEEEEeccCCCCCe
Q psy3272 63 --------------------------SV-SVSD-RRLMETRGN----------------------KHTLTIKNVQSTDFG 92 (115)
Q Consensus 63 --------------------------~g-~~~~-~~~~~~~~~----------------------~~~l~i~~~~~~d~G 92 (115)
.| .|.+ .+.|.+++. ...|.|.++..+|.|
T Consensus 111 ~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 190 (213)
T 3d9a_L 111 AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 190 (213)
T ss_dssp BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCC
T ss_pred CCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCC
Confidence 33 4454 688887542 127999999999999
Q ss_pred eeEEEeecCccceeeEEEEE
Q psy3272 93 NYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 93 ~y~C~~~n~~~~~~~~~~l~ 112 (115)
.|+|.|.|..........+.
T Consensus 191 ~Y~C~a~n~~~~~~~~~~i~ 210 (213)
T 3d9a_L 191 SYTCEATHKTSTSPIVKSFN 210 (213)
T ss_dssp EEEEEEECTTCSSCEEEEEE
T ss_pred EEEEEEEEccCCCceEEEec
Confidence 99999999887754444443
No 96
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.63 E-value=2.7e-15 Score=88.46 Aligned_cols=109 Identities=16% Similarity=0.203 Sum_probs=73.3
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC-c--cee--EEEEE--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL-G--RAK--KYMEL-------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~-~--~~~--~~~~v-------------- 62 (115)
+.+.|+|++..+....... ........|.|.++..+|+|.|.|.+.+.. + ... ..+.|
T Consensus 33 ~~~~W~k~g~~~~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~~ 109 (198)
T 1ugn_A 33 QEYRLYREKKTAPWITRIP---QELVKKGQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPS 109 (198)
T ss_dssp CCEEEEESSSCCHHHHTSC---HHHHTTTEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEESC
T ss_pred cEEEEEECCcccccccccc---ccCCcccEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCCc
Confidence 3689999988664200000 001245679999999999999999998765 3 111 13333
Q ss_pred ---------------ecccCCcEEEEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecCccc-----e
Q psy3272 63 ---------------SVSVSDRRLMETRGN-----------------KHTLTIKNVQSTDFGNYSCVADNNLGR-----A 105 (115)
Q Consensus 63 ---------------~g~~~~~~~~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~-----~ 105 (115)
.|. .+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..+. .
T Consensus 110 ~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~ 188 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLP 188 (198)
T ss_dssp SEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCC
T ss_pred cccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCc
Confidence 223 56778876542 257999999999999999999998752 2
Q ss_pred eeEEEEEEe
Q psy3272 106 KKYMELSEL 114 (115)
Q Consensus 106 ~~~~~l~v~ 114 (115)
+..+.|.|.
T Consensus 189 S~~~~l~V~ 197 (198)
T 1ugn_A 189 SDLLELLVL 197 (198)
T ss_dssp CCCEEEEEE
T ss_pred CceEEEEec
Confidence 446667664
No 97
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.63 E-value=5.2e-15 Score=93.67 Aligned_cols=109 Identities=23% Similarity=0.290 Sum_probs=77.0
Q ss_pred cceEEEECCE------EeC-CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------
Q psy3272 2 GMMSWYQDTF------LIE-PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------- 62 (115)
Q Consensus 2 p~v~W~~~~~------~~~-~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------- 62 (115)
|.|.|+|++. ++. .....++.. ....|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 48 ~~i~W~k~~~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~ 123 (349)
T 4dep_C 48 LTLIWYWTRQDRDLEEPINFRLPENRISK----EKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSP 123 (349)
T ss_dssp CEEEEEEEESSCCCEEECCCCCGGGCEEE----ETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCS
T ss_pred ceEEEEECCCCCcccccccccccCceEee----cCCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcc
Confidence 7899999874 222 000222221 2457999999999999999999987665554 3433
Q ss_pred --------------------------ecccCCcEEEEEeCCe-----------EEEEEeccCCCCCeeeEEEeecCc-cc
Q psy3272 63 --------------------------SVSVSDRRLMETRGNK-----------HTLTIKNVQSTDFGNYSCVADNNL-GR 104 (115)
Q Consensus 63 --------------------------~g~~~~~~~~~~~~~~-----------~~l~i~~~~~~d~G~y~C~~~n~~-~~ 104 (115)
.|.|.+.+.|.+++.. ..|.|.++..+|.|.|+|.|.|.. |.
T Consensus 124 ~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~ 203 (349)
T 4dep_C 124 MKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGR 203 (349)
T ss_dssp CCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTE
T ss_pred cccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCE
Confidence 1257788899876521 369999999999999999999987 44
Q ss_pred e---eeEEEEEEe
Q psy3272 105 A---KKYMELSEL 114 (115)
Q Consensus 105 ~---~~~~~l~v~ 114 (115)
. +..+.|.|.
T Consensus 204 ~~~~~~~~~l~v~ 216 (349)
T 4dep_C 204 TFHLTRTLTVKVV 216 (349)
T ss_dssp EEEEEEEEEEEEE
T ss_pred EEEEEEEEEEEEE
Confidence 3 566666653
No 98
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.63 E-value=1e-15 Score=89.47 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=70.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce----eEEEEEe--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA----KKYMELS-------------- 63 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~----~~~~~v~-------------- 63 (115)
|.+.|+|++.... .....|.|.+++.+|+|.|.|.+.+..+.. ...+.|.
T Consensus 36 ~~~~W~k~g~~~~------------~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p~~ 103 (184)
T 2gi7_A 36 DLYRLEKLSSSRY------------QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGP 103 (184)
T ss_dssp SEEEEEETTTCCE------------ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEECCC
T ss_pred CEEEEEECCcccc------------CcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCCCc
Confidence 6789999876411 135689999999999999999998865421 1133330
Q ss_pred --------------cccCCcEEEEEeCC-----------eEEEEEeccCCCCCeeeEEEeecCccc-----eeeEEEEEE
Q psy3272 64 --------------VSVSDRRLMETRGN-----------KHTLTIKNVQSTDFGNYSCVADNNLGR-----AKKYMELSE 113 (115)
Q Consensus 64 --------------g~~~~~~~~~~~~~-----------~~~l~i~~~~~~d~G~y~C~~~n~~~~-----~~~~~~l~v 113 (115)
..+.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..+. .+..+.|.|
T Consensus 104 ~v~~G~~v~l~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 183 (184)
T 2gi7_A 104 AVSSGGDVTLQCQTRYGFDQFALYKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFSSRDPYLWSAPSDPLELVV 183 (184)
T ss_dssp SSCCTTCEEEEEECSSCCCEEEEEECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEECTTSTTBCCCCCCCEEEEC
T ss_pred eecCCCcEEEEEEcCCCCcEEEEEECCCcCcceecCCCceEEEEEccCCccCCeEEEEEEEeCCCCcccCCCCCcEEEEe
Confidence 12345778877652 346889999999999999999997542 244555554
No 99
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.63 E-value=4.1e-15 Score=88.34 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=68.7
Q ss_pred CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc---ee--EEEEE------------------------------
Q psy3272 18 SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR---AK--KYMEL------------------------------ 62 (115)
Q Consensus 18 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~---~~--~~~~v------------------------------ 62 (115)
..++..........|.|.+++.+|+|.|.|.+.+..+. .. ..+.|
T Consensus 58 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~ 137 (213)
T 3mj8_L 58 PDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCM 137 (213)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEE
T ss_pred cCcEEEEecCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEE
Confidence 35666555667889999999999999999999987651 11 13332
Q ss_pred -ecc-cC-CcEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 63 -SVS-VS-DRRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 -~g~-~~-~~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.|. |+ +.+.|.+++.. ..|.|..+..+|.|.|+|.|.|..+...+.+.+
T Consensus 138 ~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~ 209 (213)
T 3mj8_L 138 INGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLSP 209 (213)
T ss_dssp EEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEECC
T ss_pred eeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeecc
Confidence 333 33 37888875531 248899999999999999999999887766543
No 100
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.63 E-value=2.3e-15 Score=87.35 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=73.9
Q ss_pred cceEEEECCEEeCCC----------CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE---------
Q psy3272 2 GMMSWYQDTFLIEPS----------VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL--------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v--------- 62 (115)
|.|.|+|++..+..- ...|+.+ ......|.|.+++.+|+|.|.|.+.+..+.....|.|
T Consensus 24 ~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~~~~~~L~V~~~~~~p~i 101 (171)
T 1ccz_A 24 KEVLWKKQKDKVAELENSEFRAFSSFKNRVYL--DTVSGSLTIYNLTSSDEDEYEMESPNITDTMKFFLYVLEMVSKPMI 101 (171)
T ss_dssp SCEEEEETTEEEEEEETTEEEECGGGTTSEEE--CTTTCCEEECSCCGGGCEEEEEECTTCCSCEEEEEEEECCCCCCEE
T ss_pred ceEEEEeCCcEEEEEcCCCcccccccCCcEEE--eCCCCeEEECCCChhhCceEEEEEeCCCCcEEEEEEEECcCCCCEE
Confidence 689999988654210 0123222 2245689999999999999999998776633335554
Q ss_pred -------------ecccCCcEEEEEeCCeE----EEEEeccCCCCCeeeEEEeecCccceeeEEEEE
Q psy3272 63 -------------SVSVSDRRLMETRGNKH----TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 63 -------------~g~~~~~~~~~~~~~~~----~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~ 112 (115)
.|.|.|.+.|..++... .+.|......|.|.|+|.|.|..+..+..+.|.
T Consensus 102 ~~~~~~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~~~l~~~~~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 102 YWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp EEETTTTEEEEECSSCSSCEEEEEETTEEEEEESSSEEEEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EEecCCcEEEEEeCCCCCcEEEEEECCEECcCCcceEEEEeccCCCceEEEEEEcccCcccceeEEe
Confidence 34577888998765321 122333347789999999999999977766543
No 101
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.63 E-value=1.4e-14 Score=85.45 Aligned_cols=109 Identities=13% Similarity=0.191 Sum_probs=74.2
Q ss_pred cceEEEECCEEeCCC----------CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee-----E--EEEE--
Q psy3272 2 GMMSWYQDTFLIEPS----------VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK-----K--YMEL-- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~-----~--~~~v-- 62 (115)
|.+.|++++..+... ...+... .......|.|.+++.+|+|.|.|.+.+..+... . .|.|
T Consensus 28 ~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~-~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~ 106 (201)
T 1dr9_A 28 TRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF-DITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKA 106 (201)
T ss_dssp CEEEEEETTEEEEEEETTEEEECHHHHTTEEE-ESTTTTEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEEC
T ss_pred cEEEEEeCCcEEEEEeCCceeecCcccceeEE-ccCCCcEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcC
Confidence 578999999876210 0122222 123456899999999999999999998654321 1 3333
Q ss_pred -------------------------ecccCCcEEEEEeCCe-----------------EEEEEeccCCCCCeeeEEEeec
Q psy3272 63 -------------------------SVSVSDRRLMETRGNK-----------------HTLTIKNVQSTDFGNYSCVADN 100 (115)
Q Consensus 63 -------------------------~g~~~~~~~~~~~~~~-----------------~~l~i~~~~~~d~G~y~C~~~n 100 (115)
.|.|.|.+.|.+++.. ....+..+...|.|.|+|.|.|
T Consensus 107 ~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n 186 (201)
T 1dr9_A 107 DFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKY 186 (201)
T ss_dssp CCCCCEEEEEECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEE
T ss_pred CCCCCceEeccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEec
Confidence 3678889999876521 0112344556899999999999
Q ss_pred CccceeeEEEE
Q psy3272 101 NLGRAKKYMEL 111 (115)
Q Consensus 101 ~~~~~~~~~~l 111 (115)
..+..+..+.+
T Consensus 187 ~~~~~s~~~~~ 197 (201)
T 1dr9_A 187 GHLRVNQTFNW 197 (201)
T ss_dssp TTCCEEEEEEE
T ss_pred CcceeeeEEec
Confidence 99998877665
No 102
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.63 E-value=9.4e-15 Score=97.96 Aligned_cols=112 Identities=18% Similarity=0.285 Sum_probs=79.0
Q ss_pred ceEEEECCEEeC-----C-------CCCCCEEEEE--eCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----
Q psy3272 3 MMSWYQDTFLIE-----P-------SVSDRRLMET--RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~-----~-------~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---- 62 (115)
.|.|+|++..+. . ....++.+.. ......|.|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 34 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p 113 (585)
T 2ocw_A 34 RKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGP 113 (585)
T ss_pred cEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCc
Confidence 789999875321 0 0023443332 233467999999999999999999877655444 3443
Q ss_pred -----------------------ec-ccCCcEEEEEeCCe-------------------------------EEEEEeccC
Q psy3272 63 -----------------------SV-SVSDRRLMETRGNK-------------------------------HTLTIKNVQ 87 (115)
Q Consensus 63 -----------------------~g-~~~~~~~~~~~~~~-------------------------------~~l~i~~~~ 87 (115)
.| .+.+.+.|.+++.. ..|.|.++.
T Consensus 114 ~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 193 (585)
T 2ocw_A 114 GLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLR 193 (585)
T ss_pred cccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCC
Confidence 22 34456788765421 169999999
Q ss_pred CCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 88 STDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 88 ~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.+|.|.|+|.+.|..+.....+.|.|.
T Consensus 194 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (585)
T 2ocw_A 194 LSDAGQYLCQAGDDSNSNKKNADLQVL 220 (585)
T ss_pred hhHCeEEEEEeccCCccccceEEEEEc
Confidence 999999999999999988778877774
No 103
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.62 E-value=4e-15 Score=87.98 Aligned_cols=85 Identities=15% Similarity=0.251 Sum_probs=63.8
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCc-ceeE--EEEE----------------------------ecccCCcEEEEEeCC
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLG-RAKK--YMEL----------------------------SVSVSDRRLMETRGN 77 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~-~~~~--~~~v----------------------------~g~~~~~~~~~~~~~ 77 (115)
...|.|.+++.+|+|.|.|.+.+..+ .... .+.| .|. ++.+.|.+++.
T Consensus 70 ~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~g~~v~l~C~~~~~-pp~i~W~~~g~ 148 (208)
T 3r4d_A 70 NGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVTLTCLSNDI-GANIQWLFNSQ 148 (208)
T ss_dssp TSCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSSCCTTCCEEEEEECSCT-TCEEEEEETTE
T ss_pred CCeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCceEeeCCCEEEEEECCCC-CCceEEEECCE
Confidence 34799999999999999999988743 2222 3333 233 36888887542
Q ss_pred -------------eEEEEEeccCCCCCeeeEEEeecCccceee-EEEEEEe
Q psy3272 78 -------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKK-YMELSEL 114 (115)
Q Consensus 78 -------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~-~~~l~v~ 114 (115)
...|.|.++..+|.|.|+|.|.|..|...+ .+.|.|.
T Consensus 149 ~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 149 SLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp ECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred eCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 247999999999999999999999998544 6666553
No 104
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.62 E-value=4.9e-15 Score=98.33 Aligned_cols=108 Identities=19% Similarity=0.215 Sum_probs=79.7
Q ss_pred cceEEEE-CCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCe-EEEEEeecCCcceeE---EEEE--------------
Q psy3272 2 GMMSWYQ-DTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFG-NYSCVADNNLGRAKK---YMEL-------------- 62 (115)
Q Consensus 2 p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~y~C~~~~~~~~~~~---~~~v-------------- 62 (115)
|.|+|++ +|..+.. ..++... ....|.|.++..+|+| .|.|.+.+..+...+ .|.|
T Consensus 144 ~~v~W~~~~g~~l~~--~~~~~~~---~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~ 218 (524)
T 2ec8_A 144 TNYSLKGCQGKPLPK--DLRFIPD---PKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSK 218 (524)
T ss_dssp SCEEEECSSSCCCCS--SCEEEEE---TTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSC
T ss_pred ceEEEEccCCcCcCC--CCceeEC---CCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecC
Confidence 6899998 7877765 5544432 3457999999999999 999999876543321 2221
Q ss_pred -----------------ecccCCc-EEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 63 -----------------SVSVSDR-RLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 63 -----------------~g~~~~~-~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.|.|.+. +.|.+++.. ..|.|.++..+|.|.|+|.|.|..|.
T Consensus 219 ~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 298 (524)
T 2ec8_A 219 ASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGS 298 (524)
T ss_dssp SEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCE
T ss_pred CcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCc
Confidence 4567776 888876533 47999999999999999999999999
Q ss_pred eeeEEEEEEe
Q psy3272 105 AKKYMELSEL 114 (115)
Q Consensus 105 ~~~~~~l~v~ 114 (115)
....+.|.|.
T Consensus 299 ~~~~~~l~V~ 308 (524)
T 2ec8_A 299 ANVTTTLEVV 308 (524)
T ss_dssp EEEEEEEEEE
T ss_pred eEEEEEEEEe
Confidence 8888888774
No 105
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.62 E-value=2e-15 Score=95.20 Aligned_cols=106 Identities=19% Similarity=0.257 Sum_probs=77.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCe-EEEEEeecCCcceeE-E-EEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFG-NYSCVADNNLGRAKK-Y-MEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~y~C~~~~~~~~~~~-~-~~v---------------- 62 (115)
|.|+|+|++..+.. ..+. . ....|.|.+++.+|+| .|.|.+.+..+.... . ..+
T Consensus 68 ~~v~W~k~~~~~~~--~~~~-~----~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~ 140 (329)
T 3oq3_B 68 NVVNWEKIGKTRRP--LNRR-V----KNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGT 140 (329)
T ss_dssp CEEEEEECSSSCEE--CSTT-E----ETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTS
T ss_pred CeeEEEECCCCccc--cCce-e----ecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEE
Confidence 57999999876654 3332 1 2567999999999999 899999987754433 1 122
Q ss_pred ------------eccc-CCcEEEEEeCCe------------EEEEEeccCCCCCeeeEEEeecC--ccceee----EEEE
Q psy3272 63 ------------SVSV-SDRRLMETRGNK------------HTLTIKNVQSTDFGNYSCVADNN--LGRAKK----YMEL 111 (115)
Q Consensus 63 ------------~g~~-~~~~~~~~~~~~------------~~l~i~~~~~~d~G~y~C~~~n~--~~~~~~----~~~l 111 (115)
.|.| .+.+.|.+++.. ..|.|.++..+|.|.|+|.|.|. .|.... .+.|
T Consensus 141 ~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l 220 (329)
T 3oq3_B 141 HDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKIL 220 (329)
T ss_dssp STTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEE
T ss_pred eCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEE
Confidence 4577 789999886532 37999999999999999999987 554332 3556
Q ss_pred EEe
Q psy3272 112 SEL 114 (115)
Q Consensus 112 ~v~ 114 (115)
.|.
T Consensus 221 ~V~ 223 (329)
T 3oq3_B 221 TVI 223 (329)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 106
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.62 E-value=8.3e-15 Score=86.34 Aligned_cols=106 Identities=15% Similarity=0.248 Sum_probs=72.2
Q ss_pred cceEEEECCEEeC----CCC------------CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-
Q psy3272 2 GMMSWYQDTFLIE----PSV------------SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~----~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v- 62 (115)
+.|.|++++..+. ... ..|+.+. ....|+|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 29 ~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~ 105 (193)
T 2if7_A 29 NFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRIL 105 (193)
T ss_dssp CEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcccCceEEEEEEecCCCeEEEEEEEEE
Confidence 5799999987542 100 0132221 3578999999999999999999876654332 2222
Q ss_pred ----------------------------ec-ccCCcEEEEEeCCe----EEEEEeccCCC-CCeeeEEEeecCccceeeE
Q psy3272 63 ----------------------------SV-SVSDRRLMETRGNK----HTLTIKNVQST-DFGNYSCVADNNLGRAKKY 108 (115)
Q Consensus 63 ----------------------------~g-~~~~~~~~~~~~~~----~~l~i~~~~~~-d~G~y~C~~~n~~~~~~~~ 108 (115)
.| .|.|.+.|.+++.. ..|.|...... |.|.|+|.|.|..|..+..
T Consensus 106 ~~~~~p~i~~~~~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 106 RQLRNIQVTNHSQLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp CCCEEEEEEECCC---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSSEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred ccCCCCeEecCceeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCCeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 33 34678899886532 35777655554 8999999999999987665
Q ss_pred EE
Q psy3272 109 ME 110 (115)
Q Consensus 109 ~~ 110 (115)
+.
T Consensus 186 ~~ 187 (193)
T 2if7_A 186 VS 187 (193)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 107
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.61 E-value=3.3e-15 Score=90.95 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=73.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.+.|++++..+.. . .....|.|.++..+|.|.|.|.+.+..+.... .+.|
T Consensus 113 ~~v~W~~~g~~~~~--~--------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~~~~~ 182 (262)
T 3rjd_A 113 YNVLYYRNGKAFKF--F--------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPL 182 (262)
T ss_dssp EEEEEEETTEEEEE--E--------EECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESSCSSE
T ss_pred ceEEEEECCccccc--c--------CCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecCceee
Confidence 58999999987754 1 12467899999999999999999987755544 3433
Q ss_pred ------------ecccC-Cc----EEEEEeCC-------eEEEEEeccCCCCCeeeEEEeecCccce---eeEEEEEEe
Q psy3272 63 ------------SVSVS-DR----RLMETRGN-------KHTLTIKNVQSTDFGNYSCVADNNLGRA---KKYMELSEL 114 (115)
Q Consensus 63 ------------~g~~~-~~----~~~~~~~~-------~~~l~i~~~~~~d~G~y~C~~~n~~~~~---~~~~~l~v~ 114 (115)
.|.|. |. +.|..++. ...|.|.++..+|.|.|+|.|.|..|.. +..+.|.|.
T Consensus 183 ~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~V~ 261 (262)
T 3rjd_A 183 LEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVL 261 (262)
T ss_dssp ETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEEESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEECEE
T ss_pred cCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecccCCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEEEe
Confidence 23443 32 44555442 3469999999999999999999999974 335555553
No 108
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.61 E-value=7.4e-16 Score=97.23 Aligned_cols=109 Identities=18% Similarity=0.345 Sum_probs=78.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc----eeE--EEEE-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR----AKK--YMEL------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~----~~~--~~~v------------- 62 (115)
|.|.|+|++..+... ..++.. ......|.|.++..+|.|.|+|.+.+..+. ... .+.|
T Consensus 155 ~~v~W~k~g~~~~~~-~~~~~~--~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~ 231 (339)
T 3o4o_C 155 VKIQWYKDSLLLDKD-NEKFLS--VRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIIS 231 (339)
T ss_dssp CCBCCEESSCBCCTT-CSSEEE--CTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECC
T ss_pred ceEEEecCCeeCCCC-CceeEE--cCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEec
Confidence 689999999888651 233332 233458999999999999999999987653 222 3333
Q ss_pred ----------------------eccc-CCcEEEEEeCC---------------------------eEEEEEeccCCCCC-
Q psy3272 63 ----------------------SVSV-SDRRLMETRGN---------------------------KHTLTIKNVQSTDF- 91 (115)
Q Consensus 63 ----------------------~g~~-~~~~~~~~~~~---------------------------~~~l~i~~~~~~d~- 91 (115)
.|.| .+.+.|..++. ...|.|.++..+|.
T Consensus 232 ~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~ 311 (339)
T 3o4o_C 232 PLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLH 311 (339)
T ss_dssp CSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCC
T ss_pred CCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcC
Confidence 2455 55666765431 11699999999998
Q ss_pred eeeEEEeecCccceeeEEEEEE
Q psy3272 92 GNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 92 G~y~C~~~n~~~~~~~~~~l~v 113 (115)
|.|+|.|.|..|..+..+.+.+
T Consensus 312 G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 312 MDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp CCCEEEEEETTEEECCBCCCCC
T ss_pred ccEEEEEEeccCceEEEEEhhH
Confidence 9999999999999887766544
No 109
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.61 E-value=5.9e-14 Score=83.67 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=63.6
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE---------------------------ecccCCcEEEEEe-CC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------------------SVSVSDRRLMETR-GN 77 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------------------~g~~~~~~~~~~~-~~ 77 (115)
....|.|.+++.+|+|.|.|.+.+ .+.... .|.| .|.|.|.+.|..+ +.
T Consensus 78 ~~~~L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~ 156 (222)
T 3sbw_C 78 GNAALQITDVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQ 156 (222)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCC
T ss_pred CEEEEEEcCcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCc
Confidence 356899999999999999999987 333322 3333 5688899999886 21
Q ss_pred e-----------------EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 K-----------------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ~-----------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
. ....+..+...|.|.|+|.|.|..|.....+.|.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 157 VLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIP 210 (222)
T ss_dssp EECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred eecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEec
Confidence 1 012222456789999999999999998888888764
No 110
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.60 E-value=1.2e-15 Score=91.16 Aligned_cols=86 Identities=15% Similarity=0.197 Sum_probs=64.8
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeE-EEEE------------------------------ecccCCcEEEEEeCC
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKK-YMEL------------------------------SVSVSDRRLMETRGN 77 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~-~~~v------------------------------~g~~~~~~~~~~~~~ 77 (115)
...|.|.+++.+|+|.|.|.+.+....... .+.| .|.|.+.+.|...+.
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~ 150 (222)
T 4i0k_A 71 NASLRLQRVRVTDEGSYTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEPNKDLRPGNMVTITCSSYQGYPEAEVFWKDGQG 150 (222)
T ss_dssp BCCEEECSCCGGGCSCEEEEEEECCCCCCCCCCCCCBCCCCCEEECCC-----CCSEEEEEEEEEEEBSCCEEEEECTTS
T ss_pred eEEEEECCcccccCEEEEEEEEeCCCceEEEEEEEEcCCCCCcEEeCCCceecCCceEEEEEecccccCCCeEEEEcCCC
Confidence 567999999999999999999853211100 1111 467888888876321
Q ss_pred ------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 ------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 151 VPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTIT 205 (222)
T ss_dssp CBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred ccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEe
Confidence 1237899999999999999999999998888888774
No 111
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.60 E-value=2.7e-14 Score=95.75 Aligned_cols=84 Identities=18% Similarity=0.169 Sum_probs=64.5
Q ss_pred EEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE---------------------------e----cccCCcEEEEEeC
Q psy3272 30 HTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------------------S----VSVSDRRLMETRG 76 (115)
Q Consensus 30 ~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------------------~----g~~~~~~~~~~~~ 76 (115)
..|.|.++..+|+|.|.|.+ +..+.... .|.| . |.|.+.+.|.+++
T Consensus 406 ~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g 484 (585)
T 2ocw_A 406 FTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG 484 (585)
T ss_pred EEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecC
Confidence 45999999999999999999 65554444 3333 1 5667778887755
Q ss_pred C----------------------eEEEEEeccCCCCCeeeEEEeecCccceee-EEEEEEe
Q psy3272 77 N----------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKK-YMELSEL 114 (115)
Q Consensus 77 ~----------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~-~~~l~v~ 114 (115)
. ...|.|.++..+|.|.|+|.|.|..|.... .+.|.|.
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~ 545 (585)
T 2ocw_A 485 CQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVE 545 (585)
T ss_pred ceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEE
Confidence 2 148999999999999999999999987554 4777764
No 112
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.60 E-value=4.3e-14 Score=83.95 Aligned_cols=108 Identities=21% Similarity=0.243 Sum_probs=72.9
Q ss_pred cceEEEECC--EEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee---EEEEE----
Q psy3272 2 GMMSWYQDT--FLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK---KYMEL---- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~---~~~~v---- 62 (115)
|.|.|+|++ ..+ ......++..........|.|.+++.+|+|.|.|.+.+..+... ..+.|
T Consensus 33 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~ 112 (212)
T 1q0x_L 33 NYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQP 112 (212)
T ss_dssp GCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSC
T ss_pred CeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCC
Confidence 579999963 222 01113566555455677999999999999999999987653211 12222
Q ss_pred ---------------------------eccc-CC-cEEEEEeCCe---------------------EEEEEeccCCCCCe
Q psy3272 63 ---------------------------SVSV-SD-RRLMETRGNK---------------------HTLTIKNVQSTDFG 92 (115)
Q Consensus 63 ---------------------------~g~~-~~-~~~~~~~~~~---------------------~~l~i~~~~~~d~G 92 (115)
.|.+ .+ .+.|.+++.. ..|.|.....+|.|
T Consensus 113 ~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 192 (212)
T 1q0x_L 113 KSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHS 192 (212)
T ss_dssp CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCC
T ss_pred CCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCC
Confidence 3333 33 7888875421 25788888889999
Q ss_pred eeEEEeecCccceeeEE
Q psy3272 93 NYSCVADNNLGRAKKYM 109 (115)
Q Consensus 93 ~y~C~~~n~~~~~~~~~ 109 (115)
.|+|.|.|.....++.+
T Consensus 193 ~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 193 SYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp EEEEEEEETTEEEEEEE
T ss_pred cEEEEEEeCCcceeeee
Confidence 99999999987765554
No 113
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.60 E-value=6.5e-17 Score=111.08 Aligned_cols=86 Identities=24% Similarity=0.341 Sum_probs=0.0
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCccee----EEEEE-----------------------------ecccCCcEEEEEe
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAK----KYMEL-----------------------------SVSVSDRRLMETR 75 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~----~~~~v-----------------------------~g~~~~~~~~~~~ 75 (115)
...|.|.++..+|+|.|.|.+.+..+... ..+.| .|.|.|.+.|.++
T Consensus 624 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~ 703 (772)
T 3v2a_R 624 ILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKD 703 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEEC
Confidence 34599999999999999999998543221 12222 5688889999876
Q ss_pred CC-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 76 GN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 76 ~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
+. ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 704 g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 755 (772)
T 3v2a_R 704 NETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIE 755 (772)
T ss_dssp ----------------------------------------------------
T ss_pred CeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEE
Confidence 53 4579999999999999999999999998888888775
No 114
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.60 E-value=5.9e-16 Score=97.42 Aligned_cols=106 Identities=26% Similarity=0.449 Sum_probs=42.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--E--------------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--Y-------------------- 59 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~-------------------- 59 (115)
|.|+|+|+|..+.. ..++.. ....|.|.+++.+|+|.|.|.+.+. +.... .
T Consensus 39 ~~v~W~k~g~~~~~--~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~ 111 (334)
T 1ry7_B 39 GPTVWVKDGTGLVP--SERVLV----GPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAE 111 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceEEEECCeeCCC--cccEEe----ccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCccccccccccccc
Confidence 58999999988865 454433 3578999999999999999999875 21111 0
Q ss_pred ---------------------EEE------------ecccCCcEEEEEeCC----------------eEEEEEeccCCCC
Q psy3272 60 ---------------------MEL------------SVSVSDRRLMETRGN----------------KHTLTIKNVQSTD 90 (115)
Q Consensus 60 ---------------------~~v------------~g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d 90 (115)
+.+ .|.|.+.+.|.+++. ...|.|.++..+|
T Consensus 112 ~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 191 (334)
T 1ry7_B 112 DTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSD 191 (334)
T ss_dssp -------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGG
T ss_pred cccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCccc
Confidence 111 457778888876542 2379999999999
Q ss_pred CeeeEEEeecCccceeeEEEEEEe
Q psy3272 91 FGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 91 ~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|+|.+.|..|.....+.|.|.
T Consensus 192 ~G~Y~C~a~n~~g~~~~~~~l~V~ 215 (334)
T 1ry7_B 192 RGNYTCVVENKFGSIRQTYTLDVL 215 (334)
T ss_dssp CCCEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEEEEeCCCCEEEEEEEEEe
Confidence 999999999999988888777764
No 115
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.59 E-value=1.8e-14 Score=85.55 Aligned_cols=109 Identities=20% Similarity=0.208 Sum_probs=75.4
Q ss_pred cceEEEEC--CEEeC---C-------CCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc--eeE--EEEE---
Q psy3272 2 GMMSWYQD--TFLIE---P-------SVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR--AKK--YMEL--- 62 (115)
Q Consensus 2 p~v~W~~~--~~~~~---~-------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~--~~~--~~~v--- 62 (115)
|.|.|+|+ +..+. . ....++..........|.|.+++.+|+|.|.|.+.+..+. ... .+.|
T Consensus 28 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~ 107 (211)
T 3tv3_L 28 NFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQ 107 (211)
T ss_dssp SCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCS
T ss_pred CeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCC
Confidence 68999994 22211 0 0135666555667789999999999999999999886551 111 2332
Q ss_pred ----------------------------ecc--cCCcEEEEEeCCe---------------------EEEEEeccCCCCC
Q psy3272 63 ----------------------------SVS--VSDRRLMETRGNK---------------------HTLTIKNVQSTDF 91 (115)
Q Consensus 63 ----------------------------~g~--~~~~~~~~~~~~~---------------------~~l~i~~~~~~d~ 91 (115)
.|. |.+.+.|.+++.. ..|.|..+..+|.
T Consensus 108 ~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 187 (211)
T 3tv3_L 108 PKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSH 187 (211)
T ss_dssp CCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHS
T ss_pred CCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCC
Confidence 333 3467788775421 3577888888899
Q ss_pred eeeEEEeecCccceeeEEE
Q psy3272 92 GNYSCVADNNLGRAKKYME 110 (115)
Q Consensus 92 G~y~C~~~n~~~~~~~~~~ 110 (115)
|.|+|.+.|..+...+.+.
T Consensus 188 g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 188 RSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp SCEEEEEEETTEEEEEEEC
T ss_pred CeEEEEEEECCCCEEeecc
Confidence 9999999999988776654
No 116
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.59 E-value=1.1e-14 Score=93.09 Aligned_cols=111 Identities=23% Similarity=0.304 Sum_probs=79.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE-------EEE-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK-------YME------------- 61 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~-------~~~------------- 61 (115)
|.+.|++++.++......+.. .......|.|.++..+|+|.|.|.+.+..+.... .+.
T Consensus 132 ~~i~W~~~~~~~~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~ 209 (382)
T 1cs6_A 132 LSYRWLLNEFPNFIPADGRRF--VSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSI 209 (382)
T ss_dssp CEEEEEESSTTCBCCCCSSEE--ECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEE
T ss_pred cEEEEEECCCccccccCceEE--EecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCce
Confidence 579999998765321123322 2234467999999999999999999865421100 111
Q ss_pred ---------E------------ecccCCcEEEEEeCC---------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 62 ---------L------------SVSVSDRRLMETRGN---------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 62 ---------v------------~g~~~~~~~~~~~~~---------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
+ .|.|.+.+.|.+.+. ...|.|.++..+|.|.|+|.+.|..|.....+.|
T Consensus 210 ~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 289 (382)
T 1cs6_A 210 KAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRI 289 (382)
T ss_dssp EECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred eccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEE
Confidence 0 567888899987542 3479999999999999999999999998777777
Q ss_pred EEe
Q psy3272 112 SEL 114 (115)
Q Consensus 112 ~v~ 114 (115)
.|.
T Consensus 290 ~V~ 292 (382)
T 1cs6_A 290 IIH 292 (382)
T ss_dssp EEE
T ss_pred EEe
Confidence 663
No 117
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.59 E-value=6.6e-14 Score=85.25 Aligned_cols=106 Identities=21% Similarity=0.306 Sum_probs=72.3
Q ss_pred cceEEEECC--EEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----
Q psy3272 2 GMMSWYQDT--FLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---- 62 (115)
|.|.|+|++ ..+ ......++..........|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 73 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~ 152 (254)
T 2c1o_A 73 TYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRAD 152 (254)
T ss_dssp BCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCC
T ss_pred CceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCC
Confidence 789999843 211 111135666555556779999999999999999999876432111 2222
Q ss_pred --------------------------ec-ccC-CcEEEEEeCC----------------------eEEEEEeccCCCCCe
Q psy3272 63 --------------------------SV-SVS-DRRLMETRGN----------------------KHTLTIKNVQSTDFG 92 (115)
Q Consensus 63 --------------------------~g-~~~-~~~~~~~~~~----------------------~~~l~i~~~~~~d~G 92 (115)
.| .|. +.+.|.+++. ...|.|.++..+|.|
T Consensus 153 ~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G 232 (254)
T 2c1o_A 153 AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 232 (254)
T ss_dssp BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred CCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCC
Confidence 34 333 3478887652 236889999999999
Q ss_pred eeEEEeecCccceee
Q psy3272 93 NYSCVADNNLGRAKK 107 (115)
Q Consensus 93 ~y~C~~~n~~~~~~~ 107 (115)
.|+|.|.|.......
T Consensus 233 ~Y~C~a~n~~~~~~~ 247 (254)
T 2c1o_A 233 SYTCEATHKTSTSPI 247 (254)
T ss_dssp EEEEEEECTTCSSCE
T ss_pred eEEEEEEcCCCCCcc
Confidence 999999998876433
No 118
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.58 E-value=7.2e-14 Score=91.18 Aligned_cols=109 Identities=10% Similarity=0.040 Sum_probs=71.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------- 62 (115)
|.|.|++++..+.. ...+.. .......|.|.+++.+|+|.|.|.+.|..+.... .|.|
T Consensus 78 p~i~W~~~~~~l~~--~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~ 154 (423)
T 3qs7_E 78 ISCLWVFKHSSLNC--QPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKME 154 (423)
T ss_dssp CEEEEEETTEEECC--CCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECS
T ss_pred CeEEEEECCCccCc--cceecc-ccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccC
Confidence 68999999987764 222111 1122457999999999999999999998776654 3333
Q ss_pred ---------ecccCCcEEEEEeCCeE----------EEEEe-ccCCCCCeeeEEEeecCccceee-EEEEEE
Q psy3272 63 ---------SVSVSDRRLMETRGNKH----------TLTIK-NVQSTDFGNYSCVADNNLGRAKK-YMELSE 113 (115)
Q Consensus 63 ---------~g~~~~~~~~~~~~~~~----------~l~i~-~~~~~d~G~y~C~~~n~~~~~~~-~~~l~v 113 (115)
.|.|.|.+.|.+.+... ..... .+...|.|.|+|.|.|..|.... .+.|.|
T Consensus 155 ~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V 226 (423)
T 3qs7_E 155 NQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDL 226 (423)
T ss_dssp SSSCEEEEEEESSCCEEEEEEC-------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEES
T ss_pred CceEEEEEEeeecCCeEEEEECCCCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEE
Confidence 57899999998865311 01111 11568999999999999998543 355544
No 119
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.57 E-value=2e-14 Score=92.13 Aligned_cols=103 Identities=20% Similarity=0.237 Sum_probs=77.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---------------- 62 (115)
|.++|+|+|..+.. ... ..........|.|.+++.+|+|.|.|.+.+..+.... .+.+
T Consensus 37 ~~v~W~k~g~~~~~--~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~ 113 (395)
T 1bih_A 37 VKYSWKKDGKSYNW--QEH-NAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPI 113 (395)
T ss_dssp CEEEEEESSSBCCT--TTT-TEEECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCB
T ss_pred ceEEEEECCcCccc--ccc-eEEEecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeee
Confidence 68999999988876 332 1122345568999999999999999999987665432 2222
Q ss_pred ------------ecccCCcEEEEEeC-------------------CeEEEEEeccCCCCCe---eeEEEeecCccceee
Q psy3272 63 ------------SVSVSDRRLMETRG-------------------NKHTLTIKNVQSTDFG---NYSCVADNNLGRAKK 107 (115)
Q Consensus 63 ------------~g~~~~~~~~~~~~-------------------~~~~l~i~~~~~~d~G---~y~C~~~n~~~~~~~ 107 (115)
.|.|.+.+.|.+++ ....|.|.++..+|.| .|+|.+.|..+....
T Consensus 114 ~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~ 192 (395)
T 1bih_A 114 EGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEV 192 (395)
T ss_dssp TTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCE
T ss_pred eCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEE
Confidence 45788899998864 1236999999999999 999999999987443
No 120
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.57 E-value=3.9e-14 Score=90.64 Aligned_cols=110 Identities=21% Similarity=0.223 Sum_probs=79.7
Q ss_pred cceEEEECCEEeCCC---CCCCEEEEEeCCeEEEEEecCCCCCC-eEEEEEeecCCcceeE------EEEE---------
Q psy3272 2 GMMSWYQDTFLIEPS---VSDRRLMETRGNKHTLTIKNVQSTDF-GNYSCVADNNLGRAKK------YMEL--------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~-G~y~C~~~~~~~~~~~------~~~v--------- 62 (115)
|.|.|++++..+... ...++.. .....|.|.+++.+|. |.|.|.+.+..+.... .+.|
T Consensus 136 ~~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p 212 (388)
T 2v5m_A 136 EVVSWHTDEEENYFPGAEYDGKYLV---LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAP 212 (388)
T ss_dssp EEEEEEETTCCEECSSSCBTTTEEE---CTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEE
T ss_pred ceEEEEeCCCcccccccCCCCcEEE---ccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCC
Confidence 579999998765321 0223322 2345799999999999 9999999875421110 1111
Q ss_pred ------------------------ecccCCcEEEEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecC
Q psy3272 63 ------------------------SVSVSDRRLMETRGN-----------------KHTLTIKNVQSTDFGNYSCVADNN 101 (115)
Q Consensus 63 ------------------------~g~~~~~~~~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~ 101 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|.
T Consensus 213 ~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 292 (388)
T 2v5m_A 213 RTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNS 292 (388)
T ss_dssp ECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECS
T ss_pred cCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecC
Confidence 568888999988631 127999999999999999999999
Q ss_pred ccceeeEEEEEEe
Q psy3272 102 LGRAKKYMELSEL 114 (115)
Q Consensus 102 ~~~~~~~~~l~v~ 114 (115)
.|..+..+.|.|.
T Consensus 293 ~g~~~~~~~l~V~ 305 (388)
T 2v5m_A 293 VGGESVETVLTVT 305 (388)
T ss_dssp SCEEEEEEEEEEE
T ss_pred CCceeEEEEEEEe
Confidence 9998877777764
No 121
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.57 E-value=2e-14 Score=95.36 Aligned_cols=107 Identities=11% Similarity=0.153 Sum_probs=74.3
Q ss_pred ceEEEECCEEeCCCCCCCEEEEE--eC----CeEEEEEecCCCCCCeEEEEEeecCCcceeEEEE---------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMET--RG----NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYME--------------- 61 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~--~~----~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~--------------- 61 (115)
.|+|+|+|.++.. ..+..... .. ....|.|.++..+|.|.|.|.+.+..+.....+.
T Consensus 147 ~v~W~k~g~~l~~--~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~ 224 (523)
T 2rcj_C 147 TVAWKADGSPVKA--GVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFP 224 (523)
T ss_pred EEEEecCCCCCCC--ceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEe
Confidence 8999999987764 22211000 01 1246999999999999999999886544332111
Q ss_pred ------------------Eecc-cCC-cEEEEEeCCe-------------------EEEEEeccCCCCCeeeEEEeecCc
Q psy3272 62 ------------------LSVS-VSD-RRLMETRGNK-------------------HTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 62 ------------------v~g~-~~~-~~~~~~~~~~-------------------~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
+.|. |.| .+.|.+++.. ..|.|.++...| |.|+|.|.|..
T Consensus 225 ~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~ 303 (523)
T 2rcj_C 225 LAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKP 303 (523)
T ss_pred cCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCC
Confidence 0344 666 7889876521 279999999999 99999999999
Q ss_pred cceeeEEEEE
Q psy3272 103 GRAKKYMELS 112 (115)
Q Consensus 103 ~~~~~~~~l~ 112 (115)
|.....+.|.
T Consensus 304 g~~~~~~~l~ 313 (523)
T 2rcj_C 304 SNTKVDKRVE 313 (523)
T ss_pred CCcceEEecC
Confidence 9866555543
No 122
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.56 E-value=3.7e-14 Score=91.00 Aligned_cols=109 Identities=22% Similarity=0.352 Sum_probs=79.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCC-CeEEEEEeecCCcceeE-----EEE--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTD-FGNYSCVADNNLGRAKK-----YME-------------- 61 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d-~G~y~C~~~~~~~~~~~-----~~~-------------- 61 (115)
|.++|++++...... ..++.. .....|.|.++..+| .|.|.|.+.+..+.... .+.
T Consensus 147 ~~v~W~~~~~~~~~~-~~~~~~---~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~ 222 (404)
T 3p3y_A 147 PVIFWMSSSMEPITQ-DKRVSQ---GHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSF 222 (404)
T ss_dssp CEEEEECTTSCBCCC-CSSEEE---CTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCB
T ss_pred CeEEEeCCCccccCC-CCcEEE---cCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCcc
Confidence 689999987533220 333332 244579999999999 59999999876543211 111
Q ss_pred -----------E------------ecccCCcEEEEEeCC------------eEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 62 -----------L------------SVSVSDRRLMETRGN------------KHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 62 -----------v------------~g~~~~~~~~~~~~~------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
+ .|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|...
T Consensus 223 ~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 302 (404)
T 3p3y_A 223 MYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIR 302 (404)
T ss_dssp SSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred ccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEE
Confidence 1 567888899988653 24799999999999999999999999988
Q ss_pred eEEEEEEe
Q psy3272 107 KYMELSEL 114 (115)
Q Consensus 107 ~~~~l~v~ 114 (115)
..+.|.|.
T Consensus 303 ~~~~l~V~ 310 (404)
T 3p3y_A 303 HTISVRVK 310 (404)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88877764
No 123
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.56 E-value=1.8e-13 Score=82.32 Aligned_cols=94 Identities=18% Similarity=0.220 Sum_probs=66.0
Q ss_pred CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee---EEEEE------------------------------ec
Q psy3272 18 SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK---KYMEL------------------------------SV 64 (115)
Q Consensus 18 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~---~~~~v------------------------------~g 64 (115)
..++..........|.|.+++.+|+|.|.|.+.+..+... ..+.| .|
T Consensus 82 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~ 161 (237)
T 3sob_L 82 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNN 161 (237)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEE
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcc
Confidence 4566665556778999999999999999999976542111 12222 33
Q ss_pred -cc-CCcEEEEEeCC----------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 65 -SV-SDRRLMETRGN----------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 65 -~~-~~~~~~~~~~~----------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.| .+.+.|.+++. ...|.|.....+|.|.|+|.|.|..........+
T Consensus 162 ~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 232 (237)
T 3sob_L 162 FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF 232 (237)
T ss_dssp EBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEEEE
T ss_pred cCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCceeeee
Confidence 44 57889987542 1357788888899999999999998764444333
No 124
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.56 E-value=1.5e-13 Score=81.58 Aligned_cols=105 Identities=23% Similarity=0.280 Sum_probs=71.3
Q ss_pred cceEEEECC--EEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEE----
Q psy3272 2 GMMSWYQDT--FLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMEL---- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v---- 62 (115)
|.|.|+|+. ..+ ......++..........|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 30 ~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~ 109 (210)
T 1lk3_L 30 SRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRAD 109 (210)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCC
T ss_pred CCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCC
Confidence 679999942 221 111135565554556779999999999999999999876532211 2222
Q ss_pred --------------------------ec-ccCC-cEEEEEeCCe----------------------EEEEEeccCCCCCe
Q psy3272 63 --------------------------SV-SVSD-RRLMETRGNK----------------------HTLTIKNVQSTDFG 92 (115)
Q Consensus 63 --------------------------~g-~~~~-~~~~~~~~~~----------------------~~l~i~~~~~~d~G 92 (115)
.| .|.+ .+.|.+++.. ..|.|..+..+|.|
T Consensus 110 ~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G 189 (210)
T 1lk3_L 110 AAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHN 189 (210)
T ss_dssp BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred cCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCC
Confidence 33 3443 6888775421 16899999999999
Q ss_pred eeEEEeecCcccee
Q psy3272 93 NYSCVADNNLGRAK 106 (115)
Q Consensus 93 ~y~C~~~n~~~~~~ 106 (115)
.|+|.|.|......
T Consensus 190 ~Y~C~a~n~~~~~~ 203 (210)
T 1lk3_L 190 LYTCEVVHKTSSSP 203 (210)
T ss_dssp EEEEEEECTTCSSC
T ss_pred cEEEEEEecCCCCe
Confidence 99999999877543
No 125
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.56 E-value=1.6e-13 Score=81.67 Aligned_cols=110 Identities=18% Similarity=0.235 Sum_probs=73.6
Q ss_pred cceEEEECC--EEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc-ce---eEEEEE---
Q psy3272 2 GMMSWYQDT--FLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG-RA---KKYMEL--- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-~~---~~~~~v--- 62 (115)
|.|.|+|++ ..+. .....++..........|.|.+++.+|+|.|.|.+.+..+ .. ...+.|
T Consensus 32 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~ 111 (216)
T 2xzc_L 32 NYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRT 111 (216)
T ss_dssp SCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCC
T ss_pred CeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCC
Confidence 589999954 2110 1013456555555677999999999999999999988654 11 112222
Q ss_pred ---------------------------ec-ccCC-cEEEEEeCCe----------------------EEEEEeccCCCCC
Q psy3272 63 ---------------------------SV-SVSD-RRLMETRGNK----------------------HTLTIKNVQSTDF 91 (115)
Q Consensus 63 ---------------------------~g-~~~~-~~~~~~~~~~----------------------~~l~i~~~~~~d~ 91 (115)
.| .|.+ .+.|.+++.. ..|.|..+..+|.
T Consensus 112 ~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~ 191 (216)
T 2xzc_L 112 VAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKH 191 (216)
T ss_dssp CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTC
T ss_pred CCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCC
Confidence 33 4444 7888875421 1588888889999
Q ss_pred eeeEEEeecCccceeeEEEE
Q psy3272 92 GNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 92 G~y~C~~~n~~~~~~~~~~l 111 (115)
|.|+|.|.|..........+
T Consensus 192 g~Y~C~a~n~~~~~~~~~~i 211 (216)
T 2xzc_L 192 KVYACEVTHQGLSSPVTKSF 211 (216)
T ss_dssp CEEEEEEECTTCSSCEEEEE
T ss_pred CcEEEEEEcCCCCCceEEec
Confidence 99999999988664444333
No 126
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.55 E-value=3.3e-15 Score=93.34 Aligned_cols=100 Identities=23% Similarity=0.343 Sum_probs=72.3
Q ss_pred cceEEEECCEEeCC--CCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE--EEE---------------
Q psy3272 2 GMMSWYQDTFLIEP--SVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY--MEL--------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~--~~v--------------- 62 (115)
|.|+|+|++..+.. ....++.. ....|.|.+++.+|+|.|.|.+.+..+..... +.+
T Consensus 36 ~~v~W~k~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~ 111 (315)
T 1itb_B 36 GTITWYKDDSKTPVSTEQASRIHQ----HKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIF 111 (315)
T ss_dssp SCCCEECTTSCSCSCCCTTSSSEE----CSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEE
T ss_pred ceEEEEeCCCcCccccccCCcEec----cCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeCCCCCccccccccc
Confidence 68999999864432 11333332 23489999999999999999998765443331 111
Q ss_pred ----------------------ecccCCcEEEEEeCCe------------EEEEEeccCCCCCeeeEEEee-cCccce
Q psy3272 63 ----------------------SVSVSDRRLMETRGNK------------HTLTIKNVQSTDFGNYSCVAD-NNLGRA 105 (115)
Q Consensus 63 ----------------------~g~~~~~~~~~~~~~~------------~~l~i~~~~~~d~G~y~C~~~-n~~~~~ 105 (115)
.|.|.+.+.|.+++.. ..|.|.++..+|.|.|+|.+. |..|..
T Consensus 112 ~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~ 189 (315)
T 1itb_B 112 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQ 189 (315)
T ss_dssp EEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEE
T ss_pred ceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcE
Confidence 2466788899876532 279999999999999999999 777775
No 127
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.55 E-value=5e-14 Score=84.06 Aligned_cols=93 Identities=13% Similarity=0.160 Sum_probs=62.6
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcce------eEEEEE----------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRA------KKYMEL---------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~------~~~~~v---------------------------- 62 (115)
.++.+... .....|.|.+++.+|+|.|.|.+.+..+.. ...+.|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 145 (219)
T 1c1e_H 66 GRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLG 145 (219)
T ss_dssp SSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEE
T ss_pred CcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEE
Confidence 45554322 245789999999999999999998764210 112222
Q ss_pred ---ec-ccCC-cEEEEEeCCe------------------EEEEEeccCCCCCeeeEEEeecCccceeeEEEEE
Q psy3272 63 ---SV-SVSD-RRLMETRGNK------------------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 63 ---~g-~~~~-~~~~~~~~~~------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~ 112 (115)
.| .|.| .+.|.+++.. ..|.| .....|.|.|+|.|.|..+.......+.
T Consensus 146 C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i-~~~~~d~g~Y~C~a~n~~~~~~~~~~i~ 217 (219)
T 1c1e_H 146 CLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTV-PSSPRPSETVTCNVAHPASSTKVDKKIV 217 (219)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEE-ESSSTTTSCCEEEEEEGGGTEEEEEECC
T ss_pred EEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEE-ecccCCCCEEEEEEEeCCCCccEEEecC
Confidence 44 6777 8888765421 25777 4444467999999999998876665554
No 128
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.55 E-value=2.2e-14 Score=87.90 Aligned_cols=102 Identities=16% Similarity=0.165 Sum_probs=75.1
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeec-CCccee---E--EEEE------------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADN-NLGRAK---K--YMEL------------ 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~-~~~~~~---~--~~~v------------ 62 (115)
.|.|+| +|..+.. . .....|.|.....+|.|.|+|.+.+ ..+... . .+.|
T Consensus 125 ~~~i~W--~g~~~~~--~--------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p 192 (265)
T 2oz4_A 125 RAKVTL--NGVPAQP--L--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCP 192 (265)
T ss_dssp TSEEEE--SSCSSSC--C--------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSC
T ss_pred CCEEEE--CCEEccC--C--------CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCC
Confidence 378999 7776643 1 1356788888889999999999974 334433 2 3333
Q ss_pred -----------------ecccCCcEEEEEeCCeE--EEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 -----------------SVSVSDRRLMETRGNKH--TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 -----------------~g~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++... ...+..+..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 193 ~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g~~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 193 GNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTYLCRARSTQGEVTREVTVNVL 263 (265)
T ss_dssp SEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCEECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCCCcEEEeehhhCeEEEEEEECCCCcEEEEEEEEEe
Confidence 56889999999877511 11223478899999999999999999999999886
No 129
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.55 E-value=1.3e-14 Score=94.58 Aligned_cols=98 Identities=15% Similarity=0.223 Sum_probs=65.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc-cee---E--EEEE-------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG-RAK---K--YMEL------------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-~~~---~--~~~v------------- 62 (115)
|.|+| +|.++.. . .....|.|..+..+|.|.|.|.+.+..+ ... . .+.|
T Consensus 311 p~i~W--~g~~~~~--~--------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~ 378 (450)
T 1z7z_I 311 AKVTL--NGVPAQP--L--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPG 378 (450)
T ss_dssp -------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCS
T ss_pred CEeEE--CCEEcCC--C--------CceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCC
Confidence 67899 6766622 1 1245789999999999999999986433 221 2 2333
Q ss_pred ----------------ecccCCcEEEEEeCCe-----EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 ----------------SVSVSDRRLMETRGNK-----HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ----------------~g~~~~~~~~~~~~~~-----~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++.. ..+ .+..+|.|.|+|.|.|..|..+..+.|.|.
T Consensus 379 ~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 448 (450)
T 1z7z_I 379 NWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESV---TVTRDLEGTYLCRARSTQGEVTREVTVNVL 448 (450)
T ss_dssp EEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTSCE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCCeE---eEehhhCeEEEEEEEeCCCceeEEEEEEEE
Confidence 6789999999988751 112 678899999999999999999999999886
No 130
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.55 E-value=2.7e-13 Score=80.42 Aligned_cols=106 Identities=17% Similarity=0.172 Sum_probs=69.7
Q ss_pred cceEEEECC-EEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------
Q psy3272 2 GMMSWYQDT-FLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL---------------- 62 (115)
Q Consensus 2 p~v~W~~~~-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v---------------- 62 (115)
|.|.|+++. .++.. . .........|.|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 31 p~i~W~~~~~~~~~~----~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~~~~~~ 104 (202)
T 1vca_A 31 PFFSWRTQIDSPLNG----K--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLE 104 (202)
T ss_dssp CEEEEEETTCCCCSS----E--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCSCCEEEESSCEE
T ss_pred CeEEEECCCCCCccc----e--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCCCCEeCCceEEc
Confidence 679999843 22211 1 112345667999999999999999999988765544 3444
Q ss_pred -----------ecc-cC--CcEEEEEeCC-------------------eEEEEEeccCCCCCeeeEEEeecCccc-----
Q psy3272 63 -----------SVS-VS--DRRLMETRGN-------------------KHTLTIKNVQSTDFGNYSCVADNNLGR----- 104 (115)
Q Consensus 63 -----------~g~-~~--~~~~~~~~~~-------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~----- 104 (115)
.|. |. +.+.|.+++. ...|.|......|.|+|+|.|.|..+.
T Consensus 105 ~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~ 184 (202)
T 1vca_A 105 AGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVP 184 (202)
T ss_dssp TTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSC
T ss_pred CCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcc
Confidence 233 33 2567876542 123567777777889999999998876
Q ss_pred --eeeEEEEEE
Q psy3272 105 --AKKYMELSE 113 (115)
Q Consensus 105 --~~~~~~l~v 113 (115)
.+..+.|.|
T Consensus 185 ~~~~~~~~L~V 195 (202)
T 1vca_A 185 TVRQAVKELQV 195 (202)
T ss_dssp SEEEEEEECCE
T ss_pred eeEeeEEEEEE
Confidence 234555555
No 131
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.55 E-value=2.4e-14 Score=85.06 Aligned_cols=107 Identities=19% Similarity=0.238 Sum_probs=72.2
Q ss_pred cceEEEECC--EEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC-Ccce----eEEEEE--
Q psy3272 2 GMMSWYQDT--FLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN-LGRA----KKYMEL-- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~-~~~~----~~~~~v-- 62 (115)
|.|.|||+. ..+. .....++..........|.|.+++.+|+|.|.|.+.+. .... ...+.|
T Consensus 29 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~ 108 (212)
T 1nfd_E 29 NFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLR 108 (212)
T ss_dssp SCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEEC
T ss_pred CeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEcc
Confidence 579999853 3221 00135565555556779999999999999999999852 1111 112222
Q ss_pred -----------------------------ecc-cC-CcEEEEEeCCe--------------------EEEEEeccCCCCC
Q psy3272 63 -----------------------------SVS-VS-DRRLMETRGNK--------------------HTLTIKNVQSTDF 91 (115)
Q Consensus 63 -----------------------------~g~-~~-~~~~~~~~~~~--------------------~~l~i~~~~~~d~ 91 (115)
.|. |. +.+.|.+++.. ..|.|.++..+|.
T Consensus 109 ~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 188 (212)
T 1nfd_E 109 GPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSH 188 (212)
T ss_dssp CCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTC
T ss_pred CCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCC
Confidence 334 44 68899876521 2378889999999
Q ss_pred eeeEEEeecCccceeeE
Q psy3272 92 GNYSCVADNNLGRAKKY 108 (115)
Q Consensus 92 G~y~C~~~n~~~~~~~~ 108 (115)
|.|+|.|.|..+..++.
T Consensus 189 G~Y~C~a~n~~~~~~~~ 205 (212)
T 1nfd_E 189 NRVSCQVTHEGETVEKS 205 (212)
T ss_dssp SCEEEEEECTTTTCCCC
T ss_pred CeEEEEEEeCCceEEEE
Confidence 99999999998775543
No 132
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.55 E-value=2.2e-13 Score=82.99 Aligned_cols=110 Identities=16% Similarity=0.159 Sum_probs=72.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc----eeEEEEEe--------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR----AKKYMELS-------------- 63 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~----~~~~~~v~-------------- 63 (115)
+.+.|||++..+....... ........|.|.+++.+|+|.|.|.+.+..+. ....|.|.
T Consensus 35 ~~~~w~k~g~~~~~~~~~~---~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~~ 111 (242)
T 1p6f_A 35 VEYQLHFEGSLFAVDRPKP---PERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGP 111 (242)
T ss_dssp CEEEEEETTEEEEEECCSS---CTTCCEEEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESCS
T ss_pred cEEEEEECCCccccccccc---cCCcceeEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccCCC
Confidence 4689999998764200000 01124678999999999999999999764221 11133331
Q ss_pred ----c----------ccCCcEEEEEeCC-----------eEEEEEeccCCCCCeeeEEEeecCc---cceeeEEEEEEe
Q psy3272 64 ----V----------SVSDRRLMETRGN-----------KHTLTIKNVQSTDFGNYSCVADNNL---GRAKKYMELSEL 114 (115)
Q Consensus 64 ----g----------~~~~~~~~~~~~~-----------~~~l~i~~~~~~d~G~y~C~~~n~~---~~~~~~~~l~v~ 114 (115)
| .+.+.+.|.+++. ...|.|.+++.+|+|.|+|.+.|.. ...+..+.|.|.
T Consensus 112 ~v~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 190 (242)
T 1p6f_A 112 EVISGEKVTFYCRLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 190 (242)
T ss_dssp EEETTCEEEEEEECTTSCSEEEEEECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEE
T ss_pred ccCCCCcEEEEEecCCCCCEEEEEECCCccCccccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEe
Confidence 1 2344677777652 3579999999999999999999864 223445666664
No 133
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.54 E-value=2.3e-14 Score=85.82 Aligned_cols=84 Identities=19% Similarity=0.292 Sum_probs=59.2
Q ss_pred EEEEEecCCCCCCeEEEEEeecCC-cceeE--EEEE--------------------------------ecccCCcEEEEE
Q psy3272 30 HTLTIKNVQSTDFGNYSCVADNNL-GRAKK--YMEL--------------------------------SVSVSDRRLMET 74 (115)
Q Consensus 30 ~~l~i~~~~~~d~G~y~C~~~~~~-~~~~~--~~~v--------------------------------~g~~~~~~~~~~ 74 (115)
..|.|.+++.+|+|.|.|.+.+.. +.... .+.| .|.|.|.+.|.+
T Consensus 77 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~ 156 (231)
T 2pet_A 77 GRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYR 156 (231)
T ss_dssp CCEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEE
T ss_pred ceEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEE
Confidence 349999999999999999998765 33333 3333 457888888987
Q ss_pred eCC-----e-----------------------EEEEEeccCCCCCeeeEEEeec-----Cccc-eeeEEEEEE
Q psy3272 75 RGN-----K-----------------------HTLTIKNVQSTDFGNYSCVADN-----NLGR-AKKYMELSE 113 (115)
Q Consensus 75 ~~~-----~-----------------------~~l~i~~~~~~d~G~y~C~~~n-----~~~~-~~~~~~l~v 113 (115)
++. . ..|.|......|.|.|+|.|.| ..+. .+..+.|.|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 157 NGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp TTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred CCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 542 1 4577764444569999999999 4555 555666654
No 134
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.54 E-value=1.2e-13 Score=86.04 Aligned_cols=79 Identities=18% Similarity=0.166 Sum_probs=60.3
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCC-cceeE--EEEE------------------------------ecccCCcEEEEE
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNL-GRAKK--YMEL------------------------------SVSVSDRRLMET 74 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~-~~~~~--~~~v------------------------------~g~~~~~~~~~~ 74 (115)
....|.|.+++.+|+|.|.|.+.+.. +.... .+.+ .|.|.+.+.|.+
T Consensus 72 ~~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~ 151 (308)
T 4fom_A 72 NDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEG 151 (308)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECC
T ss_pred CceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEE
Confidence 34679999999999999999998753 33333 2222 467888899976
Q ss_pred eCC----------------eEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 75 RGN----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 75 ~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
++. ...|.|..+...|.|.|+|.|.|..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 199 (308)
T 4fom_A 152 DLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKD 199 (308)
T ss_dssp CSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred CCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCc
Confidence 542 23689999999999999999999877643
No 135
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.53 E-value=2.2e-13 Score=88.44 Aligned_cols=99 Identities=17% Similarity=0.185 Sum_probs=68.4
Q ss_pred ceEEEECCEEeCCCCCCCEEEEE--eC-----CeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE-------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMET--RG-----NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL------------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~--~~-----~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v------------- 62 (115)
.|+|+|+|.++.. ........ .. ....|.|.++..+|+|.|.|.+.+..+.....+.+
T Consensus 149 ~v~W~k~g~~~~~--~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~ 226 (438)
T 1qgc_4 149 NVKWKIDGSERQN--GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESG 226 (438)
T ss_dssp EEEEEETTEEECT--TEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEEC
T ss_pred EEEEEECCEEcCC--CceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCC
Confidence 7999999998865 21110000 00 14579999999999999999999876552221111
Q ss_pred ----------------eccc--CCcEEEEEe--C----------------------------------CeEEEEEeccCC
Q psy3272 63 ----------------SVSV--SDRRLMETR--G----------------------------------NKHTLTIKNVQS 88 (115)
Q Consensus 63 ----------------~g~~--~~~~~~~~~--~----------------------------------~~~~l~i~~~~~ 88 (115)
.|.| .+.+.|.++ + ....|.|.++..
T Consensus 227 ~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 306 (438)
T 1qgc_4 227 GGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRS 306 (438)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred ceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCCh
Confidence 4555 567888764 1 123799999999
Q ss_pred CCCeeeEEEeecCcc
Q psy3272 89 TDFGNYSCVADNNLG 103 (115)
Q Consensus 89 ~d~G~y~C~~~n~~~ 103 (115)
+|.|.|+|.|.|..+
T Consensus 307 ~D~G~Y~C~a~n~~~ 321 (438)
T 1qgc_4 307 ADTAMYYCVRREDGG 321 (438)
T ss_dssp GGCCEEEEEECCSSS
T ss_pred hhCEEEEEEEEccCC
Confidence 999999999998443
No 136
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.53 E-value=1.5e-13 Score=81.74 Aligned_cols=91 Identities=20% Similarity=0.258 Sum_probs=64.4
Q ss_pred CCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc-----ce--eEEEEE-----------------------------
Q psy3272 19 DRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG-----RA--KKYMEL----------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-----~~--~~~~~v----------------------------- 62 (115)
.++.+........|.|.+++.+|+|.|.|.+.+..+ .. ...+.|
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C 143 (218)
T 3s96_B 64 DRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVC 143 (218)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEE
T ss_pred cceEEecCCceEEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEE
Confidence 466655556678899999999999999999977553 11 112222
Q ss_pred --ec-ccCC-cEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCccceeeEE
Q psy3272 63 --SV-SVSD-RRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 109 (115)
Q Consensus 63 --~g-~~~~-~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~ 109 (115)
.| .|.+ .+.|.+++.. ..|.|......|.|.|+|.|.|..+..++.+
T Consensus 144 ~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 144 LISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp EEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEEE
T ss_pred EECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCcccccc
Confidence 33 4556 7888875421 1266777777889999999999998766654
No 137
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.53 E-value=2.3e-13 Score=79.50 Aligned_cols=82 Identities=16% Similarity=0.155 Sum_probs=59.0
Q ss_pred CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------------ecccCCcEEEEEeCCe----
Q psy3272 27 GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------------SVSVSDRRLMETRGNK---- 78 (115)
Q Consensus 27 ~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------------~g~~~~~~~~~~~~~~---- 78 (115)
.....|+|.+++.+|+|.|.|.+.+.. .... .|.| .+.|.|.+.|..++..
T Consensus 66 ~~~~sL~I~~v~~~D~G~Y~C~v~~~~-~~~~~~~L~V~~~~~~P~i~~~~~~v~L~C~~~~gp~p~i~W~~~~~~l~~~ 144 (180)
T 2dru_A 66 KTNGALRIYNVSKEDRGDYYMRMLHET-EDQWKITMEVYEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSL 144 (180)
T ss_dssp TTTCCEEECSCCGGGCEEEEEEEESSS-EEEEEEEEEEECCCCCCEEEEEGGGTEEEEECSSCTTCEEEEEETTEEEEEE
T ss_pred CCCccEEEcCCCHHHCeEEEEEEEcCC-eEEEEEEEEEECCCCCCEEEecCCCEEEEEEeCCCCCCEEEEEECCeECcCC
Confidence 345679999999999999999987654 2222 3443 1237888899876632
Q ss_pred --EEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 79 --HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 79 --~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
..|.+.. ..|.|.|+|.|.|..+...+...+
T Consensus 145 ~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 145 RQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp SSSEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred CCCEEEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 2455532 789999999999999987665443
No 138
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.53 E-value=2.2e-13 Score=85.53 Aligned_cols=86 Identities=15% Similarity=0.225 Sum_probs=63.5
Q ss_pred CeEEEEEecCCCCCCeEEEEEee-cCCcceeE--EEEE---------------------------------ecccCCcEE
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVAD-NNLGRAKK--YMEL---------------------------------SVSVSDRRL 71 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~-~~~~~~~~--~~~v---------------------------------~g~~~~~~~ 71 (115)
....|.|.+++.+|+|.|.|.+. +..+.... .+.| .|.|.+.+.
T Consensus 90 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~ 169 (331)
T 3u83_A 90 TDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVS 169 (331)
T ss_dssp SBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEE
T ss_pred CCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEE
Confidence 45679999999999999999843 33333222 2222 457788888
Q ss_pred EEEeCC-----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 72 METRGN-----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 72 ~~~~~~-----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
|.++.. ...|.|..+...|.|.|+|.+.|..+..+..+.|.|
T Consensus 170 W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V 228 (331)
T 3u83_A 170 WETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNV 228 (331)
T ss_dssp EEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCE
T ss_pred EEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEE
Confidence 887321 135888888999999999999999988777777665
No 139
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.52 E-value=9.3e-14 Score=85.82 Aligned_cols=76 Identities=12% Similarity=0.103 Sum_probs=58.7
Q ss_pred CCCCeEEEEEeecCCcceeE---EEEE-----------------------------ecccCCcEEEEEeC----------
Q psy3272 39 STDFGNYSCVADNNLGRAKK---YMEL-----------------------------SVSVSDRRLMETRG---------- 76 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~---~~~v-----------------------------~g~~~~~~~~~~~~---------- 76 (115)
..|+|.|.|.+.+..+...+ .+.| .|.|.+.+.|..++
T Consensus 150 ~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~ 229 (289)
T 3mjg_X 150 IFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPV 229 (289)
T ss_dssp CCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCE
T ss_pred eccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCccccc
Confidence 57999999999865543322 2222 56888888998432
Q ss_pred ----------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 77 ----------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 77 ----------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
....|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 230 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~ 277 (289)
T 3mjg_X 230 TDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINIT 277 (289)
T ss_dssp EEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred ccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEE
Confidence 12589999999999999999999999998888877764
No 140
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.52 E-value=2.8e-13 Score=84.15 Aligned_cols=104 Identities=18% Similarity=0.254 Sum_probs=76.5
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEec-CCCCCCeEEEEEeecCCcceeE--EEEEecccCCc--------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKN-VQSTDFGNYSCVADNNLGRAKK--YMELSVSVSDR-------- 69 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~~~-------- 69 (115)
.|.|.|++++..+.. ..++..........|.|.+ +..+|.|.|.|.+.|..+.... .+.|.+.|.+.
T Consensus 133 ~p~i~W~~~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~ 210 (305)
T 2nzi_A 133 DPVITWQKGQDLIDN--NGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDV 210 (305)
T ss_dssp CCEEEEEESSSBCCS--SSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESC
T ss_pred CCEEEEEECCEECCC--CCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeec
Confidence 368999999988876 6666665556678899999 9999999999999999887766 44443322111
Q ss_pred ------EEE--------------------------EEe--CCeEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 70 ------RLM--------------------------ETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 70 ------~~~--------------------------~~~--~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
+.| ... .....+.|.++...+.|.|+|.|.|..|...
T Consensus 211 ~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~ 281 (305)
T 2nzi_A 211 SRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGLSK 281 (305)
T ss_dssp CSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEECC
T ss_pred cCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccccCceEEecCCCCCCeEEEEEEEEeCCcccC
Confidence 111 110 0123688999999999999999999998743
No 141
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.52 E-value=1.3e-12 Score=79.22 Aligned_cols=86 Identities=24% Similarity=0.336 Sum_probs=60.1
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcce------eE----------------------------EEE
Q psy3272 18 SDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRA------KK----------------------------YME 61 (115)
Q Consensus 18 ~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~------~~----------------------------~~~ 61 (115)
..++.+... .....|.|.+++.+|+|.|.|.+.+..+.. .. .+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (247)
T 2ghw_B 67 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLS 146 (247)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEE
T ss_pred cCcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEE
Confidence 356655432 346789999999999999999998761110 00 111
Q ss_pred E------------ecccCCcEEEEEe--C---------------------------CeEEEEEeccCCCCCeeeEEEeec
Q psy3272 62 L------------SVSVSDRRLMETR--G---------------------------NKHTLTIKNVQSTDFGNYSCVADN 100 (115)
Q Consensus 62 v------------~g~~~~~~~~~~~--~---------------------------~~~~l~i~~~~~~d~G~y~C~~~n 100 (115)
+ .|.|.+.+.|.+. + ....|.|.++..+|+|.|+|.|.|
T Consensus 147 v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 226 (247)
T 2ghw_B 147 LSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRS 226 (247)
T ss_dssp ECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECS
T ss_pred ecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEcc
Confidence 1 4566778888772 1 133699999999999999999998
Q ss_pred Ccc
Q psy3272 101 NLG 103 (115)
Q Consensus 101 ~~~ 103 (115)
...
T Consensus 227 ~~~ 229 (247)
T 2ghw_B 227 NWP 229 (247)
T ss_dssp SSS
T ss_pred CCC
Confidence 643
No 142
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.51 E-value=5.1e-14 Score=88.22 Aligned_cols=98 Identities=15% Similarity=0.243 Sum_probs=66.7
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc-----cee--EEEEE-----------
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG-----RAK--KYMEL----------- 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-----~~~--~~~~v----------- 62 (115)
.|.+.|+|+|..+.. ... .......|.|.+++.+|+|.|.|.+.+..+ ... ..+.|
T Consensus 51 ~~~~~W~k~g~~~~~--~~~----~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~ 124 (316)
T 3vh8_G 51 FNNFMLYKEDRIHIP--IFH----GRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLA 124 (316)
T ss_dssp CCSEEEEESSCSSSC--HHH----HCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEE
T ss_pred CceEEEEeCCCccce--eec----CCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEe
Confidence 368999999976543 100 112356799999999999999999874221 111 13333
Q ss_pred -----------------ecccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 63 -----------------SVSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 63 -----------------~g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
...+.+.+.|.+++. ...|.|.++..+|+|.|+|.|.|..+.
T Consensus 125 ~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 125 HPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp ESCSEEETTCCEEEEEEESSCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred cCCCccCCCCeEEEEEcCCCCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence 113445667766542 246999999999999999999998774
No 143
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.51 E-value=2.4e-13 Score=90.22 Aligned_cols=109 Identities=18% Similarity=0.275 Sum_probs=73.1
Q ss_pred cceEEEECC--EEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce-----eEEEEE--
Q psy3272 2 GMMSWYQDT--FLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA-----KKYMEL-- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-----~~~~~v-- 62 (115)
|.|.|+|++ ..+. .....++..........|.|.+++.+|+|.|.|.+.+..+.. ...+.|
T Consensus 30 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~ 109 (523)
T 2rcj_C 30 ITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLG 109 (523)
T ss_pred ceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEecc
Confidence 679999974 2111 001244443333456789999999999999999999864311 112222
Q ss_pred -----------------------------ecccCC--cEEEEEeCCe---------------------EEEEEeccCCCC
Q psy3272 63 -----------------------------SVSVSD--RRLMETRGNK---------------------HTLTIKNVQSTD 90 (115)
Q Consensus 63 -----------------------------~g~~~~--~~~~~~~~~~---------------------~~l~i~~~~~~d 90 (115)
.|.|++ .+.|.+++.. ..|.|.++..+|
T Consensus 110 ~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 189 (523)
T 2rcj_C 110 QPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKS 189 (523)
T ss_pred CCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCC
Confidence 344443 7888776521 258999999999
Q ss_pred CeeeEEEeecCccceeeEEE
Q psy3272 91 FGNYSCVADNNLGRAKKYME 110 (115)
Q Consensus 91 ~G~y~C~~~n~~~~~~~~~~ 110 (115)
.|.|+|.|.|..+.....+.
T Consensus 190 ~G~Y~C~a~n~~~~~~~~~~ 209 (523)
T 2rcj_C 190 HRSYSCQVTHEGSTVEKTVA 209 (523)
T ss_pred CceEEEEEEecCccccccee
Confidence 99999999999887655544
No 144
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.51 E-value=1.6e-12 Score=79.59 Aligned_cols=84 Identities=19% Similarity=0.333 Sum_probs=59.6
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcc-----e--eEEEEE---------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGR-----A--KKYMEL--------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-----~--~~~~~v--------------------------- 62 (115)
.++.+... .....|.|.+++.+|+|.|.|.+.+..+. . ...|.|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~ 145 (256)
T 1nqb_A 66 SKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRS 145 (256)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEE
T ss_pred CeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEe
Confidence 55555432 34678999999999999999999986431 1 012322
Q ss_pred ecccCC-----cEEEEEe--CC---------------------------eEEEEEeccCCCCCeeeEEEeecCc
Q psy3272 63 SVSVSD-----RRLMETR--GN---------------------------KHTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 63 ~g~~~~-----~~~~~~~--~~---------------------------~~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
.|.|.+ .+.|.+. +. ...|.|.++..+|+|.|+|.+.|..
T Consensus 146 ~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 219 (256)
T 1nqb_A 146 SQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHV 219 (256)
T ss_dssp SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred cCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCC
Confidence 345544 7888772 21 2369999999999999999999854
No 145
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.51 E-value=1.2e-13 Score=86.58 Aligned_cols=108 Identities=14% Similarity=0.141 Sum_probs=66.2
Q ss_pred cceEEEECCEEeCCCCCCCEE-EEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc-------eeEEEEE-----------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRL-METRGNKHTLTIKNVQSTDFGNYSCVADNNLGR-------AKKYMEL----------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-------~~~~~~v----------- 62 (115)
+.+.|+|++..+.. ..... .........|.|.+++.+|+|.|.|.+.+..+. ....+.|
T Consensus 147 ~~~~w~k~g~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~ 224 (316)
T 3vh8_G 147 EHFFLHKEGISKDP--SRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSA 224 (316)
T ss_dssp SEEEEEETTCCSCC--EEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEE
T ss_pred cEEEEEECCCcccc--ceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEe
Confidence 57899999876643 11100 000123578999999999999999999987653 1113333
Q ss_pred -----------------ecccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCccc-----
Q psy3272 63 -----------------SVSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNLGR----- 104 (115)
Q Consensus 63 -----------------~g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~----- 104 (115)
...|.+.+.|.+++. ...|.|.+++ |+|.|+|.+.|..+.
T Consensus 225 ~~~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~ 302 (316)
T 3vh8_G 225 QPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSD 302 (316)
T ss_dssp ESCSCCCTTSCCEEEEEESSCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECC
T ss_pred CCCCeecCCCcEEEEEECCCCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccC
Confidence 114556778877652 1578899998 999999999997653
Q ss_pred eeeEEEEEE
Q psy3272 105 AKKYMELSE 113 (115)
Q Consensus 105 ~~~~~~l~v 113 (115)
.+..+.|.|
T Consensus 303 ~S~~~~l~V 311 (316)
T 3vh8_G 303 PSDPLLVSV 311 (316)
T ss_dssp CCCCEEC--
T ss_pred CCCcEEEEE
Confidence 344555554
No 146
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.51 E-value=2.2e-13 Score=80.85 Aligned_cols=90 Identities=11% Similarity=0.114 Sum_probs=60.7
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCccee-EEEEE-------------------------------e
Q psy3272 18 SDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRAK-KYMEL-------------------------------S 63 (115)
Q Consensus 18 ~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~-~~~~v-------------------------------~ 63 (115)
..++.+... .....|.|.+++.+|+|.|.|.+.+...... ..+.| .
T Consensus 64 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 143 (210)
T 3d9a_H 64 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVK 143 (210)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEE
T ss_pred CceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEe
Confidence 345554432 2356899999999999999999986421100 11211 3
Q ss_pred cc-cCC-cEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccceeeE
Q psy3272 64 VS-VSD-RRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKY 108 (115)
Q Consensus 64 g~-~~~-~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~ 108 (115)
|. |.| .+.|..++. ...|.|..+...| |.|+|.|.|..+.....
T Consensus 144 g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 144 GYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp EEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred eEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 44 777 788866543 1248888888766 99999999999886544
No 147
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.51 E-value=1.8e-13 Score=81.18 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=60.7
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcce------eEEEEE---------------------------ec----ccCCcEE
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRA------KKYMEL---------------------------SV----SVSDRRL 71 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~------~~~~~v---------------------------~g----~~~~~~~ 71 (115)
...|.|.+++.+|+|.|.|.+.+..+.. ...|.| .| .|.|.+.
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~G~~v~L~C~~~~~~~~~p~p~v~ 160 (214)
T 2zg1_A 81 NCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFS 160 (214)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--CCCCTTCCEEEEEECTTCCSCSSCCEEE
T ss_pred eEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCccccCCCeEEEEEEeccCCCCCCCceEE
Confidence 4579999999999999999998764211 113333 22 3778889
Q ss_pred EEEeCC---------eEEEEEeccCCCCCeeeEEEeecCccc--eeeEEEEEE
Q psy3272 72 METRGN---------KHTLTIKNVQSTDFGNYSCVADNNLGR--AKKYMELSE 113 (115)
Q Consensus 72 ~~~~~~---------~~~l~i~~~~~~d~G~y~C~~~n~~~~--~~~~~~l~v 113 (115)
|..++. ...|.|..+...|.|.|+|.|.|..+. .+..+.|.|
T Consensus 161 W~~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~V 213 (214)
T 2zg1_A 161 WTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNV 213 (214)
T ss_dssp EESSTTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECCC
T ss_pred EeCCCCccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEEe
Confidence 987642 357999999999999999999998654 455665544
No 148
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.51 E-value=9.6e-13 Score=79.42 Aligned_cols=99 Identities=21% Similarity=0.280 Sum_probs=66.9
Q ss_pred cceEEEECC--EE---eC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce---eEEEEE----
Q psy3272 2 GMMSWYQDT--FL---IE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA---KKYMEL---- 62 (115)
Q Consensus 2 p~v~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~---~~~~~v---- 62 (115)
|.|.|+|+. .. +. .....++..........|.|.+++.+|+|.|.|.+.+..+.. ...+.|
T Consensus 35 ~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~ 114 (240)
T 1moe_A 35 GFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGG 114 (240)
T ss_dssp ECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCS
T ss_pred ceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCC
Confidence 579999952 21 10 101346665555566789999999999999999998764321 112222
Q ss_pred -----------------------------eccc--CCcEEEEEeC-----------------------------------
Q psy3272 63 -----------------------------SVSV--SDRRLMETRG----------------------------------- 76 (115)
Q Consensus 63 -----------------------------~g~~--~~~~~~~~~~----------------------------------- 76 (115)
.|.| .+.+.|.+..
T Consensus 115 ~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (240)
T 1moe_A 115 SGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTS 194 (240)
T ss_dssp CCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETT
T ss_pred CCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEccc
Confidence 3444 3578887741
Q ss_pred -CeEEEEEeccCCCCCeeeEEEeec
Q psy3272 77 -NKHTLTIKNVQSTDFGNYSCVADN 100 (115)
Q Consensus 77 -~~~~l~i~~~~~~d~G~y~C~~~n 100 (115)
....|.|.++..+|+|.|+|.|.+
T Consensus 195 ~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 195 SNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEECS
T ss_pred CCEEEEEECcCCHHHCEEEEEEEEe
Confidence 113699999999999999999994
No 149
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.51 E-value=1.3e-12 Score=79.29 Aligned_cols=51 Identities=31% Similarity=0.596 Sum_probs=36.4
Q ss_pred cceEEEECCE-----Ee-------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDTF-----LI-------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~~-----~~-------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|+|... .+ ......++..........|.|.+++.+|+|.|.|.+.+.
T Consensus 34 ~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~ 96 (250)
T 3esu_F 34 NYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNT 96 (250)
T ss_dssp TCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEEEeeC
Confidence 5799999531 11 111145666555566779999999999999999999764
No 150
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.50 E-value=2.4e-13 Score=81.77 Aligned_cols=108 Identities=19% Similarity=0.245 Sum_probs=72.7
Q ss_pred ceEEEECC--EEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc---ee--EEEEE---
Q psy3272 3 MMSWYQDT--FLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR---AK--KYMEL--- 62 (115)
Q Consensus 3 ~v~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~---~~--~~~~v--- 62 (115)
.|.|+|++ ..+ ......++..........|.|.+++.+|+|.|.|.+.+..+. .. ..+.|
T Consensus 52 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 131 (234)
T 2j6e_L 52 YVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQ 131 (234)
T ss_dssp CCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCC
T ss_pred eEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecC
Confidence 59999963 221 000134565554556779999999999999999999876541 10 01111
Q ss_pred ----------------------------ecc-cC-CcEEEEEeCCe---------------------EEEEEeccCCCCC
Q psy3272 63 ----------------------------SVS-VS-DRRLMETRGNK---------------------HTLTIKNVQSTDF 91 (115)
Q Consensus 63 ----------------------------~g~-~~-~~~~~~~~~~~---------------------~~l~i~~~~~~d~ 91 (115)
.|. |. +.+.|.+++.. ..|.|..+..+|.
T Consensus 132 ~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 211 (234)
T 2j6e_L 132 PKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSH 211 (234)
T ss_dssp CCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTS
T ss_pred CCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCC
Confidence 333 33 37888875421 2578888888999
Q ss_pred eeeEEEeecCccceeeEEE
Q psy3272 92 GNYSCVADNNLGRAKKYME 110 (115)
Q Consensus 92 G~y~C~~~n~~~~~~~~~~ 110 (115)
|.|+|.|.|.....++++.
T Consensus 212 G~Y~C~a~n~~~~~~~~~~ 230 (234)
T 2j6e_L 212 RSYSCQVTHEGSTVEKTVA 230 (234)
T ss_dssp CCEEEEEEBTTBCCCEEEC
T ss_pred CeEEEEEEeCCCceEEecc
Confidence 9999999999887666543
No 151
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.50 E-value=3e-13 Score=79.95 Aligned_cols=97 Identities=11% Similarity=0.131 Sum_probs=62.4
Q ss_pred cceEEEECCEEeCCCCCCCEE-EEEeCCeEEEEEecCCCCCCeEEEEEeecCCc-----c--eeEEEEEe----------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRL-METRGNKHTLTIKNVQSTDFGNYSCVADNNLG-----R--AKKYMELS---------- 63 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-----~--~~~~~~v~---------- 63 (115)
|.+.|+|+|..+.. ..... .........|.|.+++.+|+|.|.|.+.+... . ....+.|.
T Consensus 36 ~~~~w~k~g~~~~~--~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~ 113 (201)
T 1nkr_A 36 EHFLLHREGMFNDT--LRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSA 113 (201)
T ss_dssp SEEEEEEESSSCEE--EEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEE
T ss_pred CEEEEEECCCcCCc--ceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceec
Confidence 67999999875432 11000 00012357899999999999999999965321 1 11133331
Q ss_pred ------------------cccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCc
Q psy3272 64 ------------------VSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 64 ------------------g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
..+.+.+.|.+++. ...|.|.+++ |+|.|+|.|.+..
T Consensus 114 ~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 114 QPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp ESCSEECTTCEEEEEEEESSCCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred CCCCccCCCCeEEEEEeCCCCCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 12456677877542 3468999998 9999999999653
No 152
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.50 E-value=4.8e-13 Score=79.37 Aligned_cols=91 Identities=19% Similarity=0.264 Sum_probs=61.8
Q ss_pred CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee---EEEEE------------------------------ec
Q psy3272 18 SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK---KYMEL------------------------------SV 64 (115)
Q Consensus 18 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~---~~~~v------------------------------~g 64 (115)
..++..........|.|.+++.+|+|.|.|.+.+..+... ..+.| .|
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g 138 (213)
T 3r06_A 59 PSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNN 138 (213)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred CCcEEEeccCCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEee
Confidence 4566655556678999999999999999999986532111 12222 33
Q ss_pred ccC--CcEEEEEeCCe----------------------EEEEEeccCCCCCeeeEEEeecCccceeeE
Q psy3272 65 SVS--DRRLMETRGNK----------------------HTLTIKNVQSTDFGNYSCVADNNLGRAKKY 108 (115)
Q Consensus 65 ~~~--~~~~~~~~~~~----------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~ 108 (115)
.++ +.+.|.+++.. ..|.|......|.|.|+|.+.|........
T Consensus 139 ~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~~~~ 206 (213)
T 3r06_A 139 FYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTAAIV 206 (213)
T ss_dssp EBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEE
T ss_pred ecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCcceE
Confidence 333 37788775421 246677777788999999999987654433
No 153
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.50 E-value=9.8e-13 Score=80.43 Aligned_cols=85 Identities=26% Similarity=0.358 Sum_probs=59.6
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc-------ce----eEEEEE----------------------
Q psy3272 18 SDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG-------RA----KKYMEL---------------------- 62 (115)
Q Consensus 18 ~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~-------~~----~~~~~v---------------------- 62 (115)
..|+.+... .....|+|.+++.+|+|.|.|.+.+..+ .. ...|.|
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 143 (257)
T 1f3r_B 64 KSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLT 143 (257)
T ss_dssp STTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSC
T ss_pred CCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEE
Confidence 345555432 4567899999999999999999987632 00 001111
Q ss_pred --------------------ecccCCcEEEEEe--C---------------------------CeEEEEEeccCCCCCee
Q psy3272 63 --------------------SVSVSDRRLMETR--G---------------------------NKHTLTIKNVQSTDFGN 93 (115)
Q Consensus 63 --------------------~g~~~~~~~~~~~--~---------------------------~~~~l~i~~~~~~d~G~ 93 (115)
.|.+.+.+.|.+. + ....|.|.++..+|+|.
T Consensus 144 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 223 (257)
T 1f3r_B 144 QSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVAT 223 (257)
T ss_dssp EETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSE
T ss_pred ccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEE
Confidence 3455667888772 1 12369999999999999
Q ss_pred eEEEeecCc
Q psy3272 94 YSCVADNNL 102 (115)
Q Consensus 94 y~C~~~n~~ 102 (115)
|+|.+.|..
T Consensus 224 Y~C~a~n~~ 232 (257)
T 1f3r_B 224 YFCYQYNNG 232 (257)
T ss_dssp EEEEEESSS
T ss_pred EEEEEeCCC
Confidence 999999975
No 154
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.50 E-value=4.3e-13 Score=79.59 Aligned_cols=98 Identities=21% Similarity=0.331 Sum_probs=68.8
Q ss_pred cceEEEECC--E---EeCC-------CCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc---ee--EEEEE--
Q psy3272 2 GMMSWYQDT--F---LIEP-------SVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR---AK--KYMEL-- 62 (115)
Q Consensus 2 p~v~W~~~~--~---~~~~-------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~---~~--~~~~v-- 62 (115)
|.|.|+|+. . .+.. ....++..........|.|.+++.+|+|.|.|.+.+..+. .. ..+.|
T Consensus 31 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 31 SYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred ceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeC
Confidence 689999942 1 1100 0135666555566779999999999999999999875542 11 12222
Q ss_pred ----------------------------ec-ccCCcEEEEEeCC----------------------eEEEEEeccCCCCC
Q psy3272 63 ----------------------------SV-SVSDRRLMETRGN----------------------KHTLTIKNVQSTDF 91 (115)
Q Consensus 63 ----------------------------~g-~~~~~~~~~~~~~----------------------~~~l~i~~~~~~d~ 91 (115)
.| .|.+.+.|.+++. ...|.|..+..+|.
T Consensus 111 ~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~ 190 (213)
T 3nl4_L 111 DPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSH 190 (213)
T ss_dssp CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTC
T ss_pred CCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCC
Confidence 34 7888899987542 12588999999999
Q ss_pred eeeEEEee
Q psy3272 92 GNYSCVAD 99 (115)
Q Consensus 92 G~y~C~~~ 99 (115)
|.|+|.|.
T Consensus 191 g~Y~C~a~ 198 (213)
T 3nl4_L 191 KEYTCKVT 198 (213)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999999
No 155
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.50 E-value=1.7e-13 Score=73.87 Aligned_cols=56 Identities=27% Similarity=0.414 Sum_probs=49.3
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|+|+|..+.. ..++.+........|.|.++..+|+|.|.|.+.|..|....
T Consensus 42 ~p~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 97 (107)
T 3knb_B 42 PPVVVWEKGGQQLAA--SERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYA 97 (107)
T ss_dssp CCEEEEEETTEECCC--CSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCEEEEEECcccccc--eeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEE
Confidence 378999999999987 77777666677889999999999999999999999887776
No 156
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.49 E-value=7.5e-13 Score=79.79 Aligned_cols=74 Identities=19% Similarity=0.202 Sum_probs=53.6
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCCcc--------e-eE-------------------------EEEE-----------
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNLGR--------A-KK-------------------------YMEL----------- 62 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~--------~-~~-------------------------~~~v----------- 62 (115)
....|.|.+++.+|+|.|.|.+.+..+. . .. .+.+
T Consensus 71 ~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~ 150 (238)
T 2p1y_A 71 ENFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCS 150 (238)
T ss_dssp SBCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEE
T ss_pred ceEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEE
Confidence 3568999999999999999999865320 0 00 1111
Q ss_pred -ecccCCcEEEEEeC-------------------------------CeEEEEEeccCCCCCeeeEEEeecC
Q psy3272 63 -SVSVSDRRLMETRG-------------------------------NKHTLTIKNVQSTDFGNYSCVADNN 101 (115)
Q Consensus 63 -~g~~~~~~~~~~~~-------------------------------~~~~l~i~~~~~~d~G~y~C~~~n~ 101 (115)
.|.|.+.+.|.+.+ ....|.|.++..+|+|.|+|.|.|.
T Consensus 151 ~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 221 (238)
T 2p1y_A 151 YENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDT 221 (238)
T ss_dssp CCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEET
T ss_pred EecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeC
Confidence 45667778887642 1247999999999999999999998
No 157
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.49 E-value=1.6e-13 Score=82.04 Aligned_cols=85 Identities=11% Similarity=0.162 Sum_probs=63.8
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCC-cceeE--EEEE---------------------------e-cccCCcEEEEEeC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNL-GRAKK--YMEL---------------------------S-VSVSDRRLMETRG 76 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~-~~~~~--~~~v---------------------------~-g~~~~~~~~~~~~ 76 (115)
....|.|.+++.+|+|.|.|.+.+.. +.... .|.| . |.|.|.+.|..++
T Consensus 76 ~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~~~g~~~~~l~C~~~~g~P~p~v~W~k~~ 155 (221)
T 3eow_R 76 RDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDL 155 (221)
T ss_dssp CCCEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCCCCSSSCCEEEEEEESCSSCCCEEEECSS
T ss_pred CCceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcccCCceEEEEEEECCCccCCCeeEEEeCC
Confidence 45689999999999999999998644 22222 1111 2 6888889996532
Q ss_pred ------------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEE
Q psy3272 77 ------------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 77 ------------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~ 112 (115)
....|.|..+...|.|.|+|.|.|..+.....+.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~ 209 (221)
T 3eow_R 156 GGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS 209 (221)
T ss_dssp SCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC
T ss_pred CCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE
Confidence 124689999999999999999999998877766654
No 158
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.49 E-value=2.4e-13 Score=72.43 Aligned_cols=58 Identities=24% Similarity=0.289 Sum_probs=48.6
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|+|+|..+......++.+........|.|.++..+|+|.|.|.+.|..|....
T Consensus 34 ~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 91 (100)
T 3knb_A 34 TPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSA 91 (100)
T ss_dssp CCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEE
Confidence 3789999999998763244666666667789999999999999999999999988766
No 159
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.49 E-value=6.6e-13 Score=86.20 Aligned_cols=105 Identities=23% Similarity=0.368 Sum_probs=73.8
Q ss_pred cceEEEECC--EEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce---eEEEEE----
Q psy3272 2 GMMSWYQDT--FLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA---KKYMEL---- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~---~~~~~v---- 62 (115)
+.|.|+|++ ..+. .....++..........|.|.+++.+|+|.|.|.+.+..+.. ...+.|
T Consensus 35 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~ 114 (438)
T 1qgc_4 35 SFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRAD 114 (438)
T ss_dssp ECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCC
T ss_pred ceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCC
Confidence 479999963 2210 111356665555667899999999999999999998765421 112222
Q ss_pred --------------------------ec-ccCC-cEEEEEeCC----------------------eEEEEEeccCCCCCe
Q psy3272 63 --------------------------SV-SVSD-RRLMETRGN----------------------KHTLTIKNVQSTDFG 92 (115)
Q Consensus 63 --------------------------~g-~~~~-~~~~~~~~~----------------------~~~l~i~~~~~~d~G 92 (115)
.| .|.+ .+.|.+++. ...|.|.++..+|.|
T Consensus 115 ~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 194 (438)
T 1qgc_4 115 AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 194 (438)
T ss_dssp BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCC
T ss_pred CCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCC
Confidence 23 5666 788987541 136899999999999
Q ss_pred eeEEEeecCcccee
Q psy3272 93 NYSCVADNNLGRAK 106 (115)
Q Consensus 93 ~y~C~~~n~~~~~~ 106 (115)
.|+|.|.|..+...
T Consensus 195 ~Y~C~a~n~~~~~~ 208 (438)
T 1qgc_4 195 SYTCEATHKTSTSP 208 (438)
T ss_dssp EEEEEEEETTCSSC
T ss_pred eEEEEEEecccCCc
Confidence 99999999988743
No 160
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.48 E-value=2.6e-12 Score=78.32 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=28.6
Q ss_pred CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 18 SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 18 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
..++..........|.|.+++.+|+|.|.|.+.+.
T Consensus 62 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (256)
T 3ux9_B 62 PDRFSGSKSGTSASLAITGLQSEDEADYYCQVRDN 96 (256)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcEEEEccCCEEEEEECCCChhhCEEEEEEEEEC
Confidence 35666655566778999999999999999999874
No 161
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.48 E-value=9.1e-13 Score=80.27 Aligned_cols=105 Identities=23% Similarity=0.340 Sum_probs=70.5
Q ss_pred cceEEEECC--EEe----------CCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee---EEEEE----
Q psy3272 2 GMMSWYQDT--FLI----------EPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK---KYMEL---- 62 (115)
Q Consensus 2 p~v~W~~~~--~~~----------~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~---~~~~v---- 62 (115)
|.|.|||++ ..+ ......++..........|.|.+++.+|+|.|.|.+.+..+... ..+.|
T Consensus 69 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~ 148 (252)
T 3bkj_L 69 TYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRAD 148 (252)
T ss_dssp BCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCC
T ss_pred CcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCC
Confidence 689999964 111 11113566655555677999999999999999999987543111 12222
Q ss_pred --------------------------ec-ccCC-cEEEEEeCCe----------------------EEEEEeccCCCCCe
Q psy3272 63 --------------------------SV-SVSD-RRLMETRGNK----------------------HTLTIKNVQSTDFG 92 (115)
Q Consensus 63 --------------------------~g-~~~~-~~~~~~~~~~----------------------~~l~i~~~~~~d~G 92 (115)
.| .|.+ .+.|.+++.. ..|.|..+..+|.|
T Consensus 149 ~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g 228 (252)
T 3bkj_L 149 AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHN 228 (252)
T ss_dssp BCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCC
T ss_pred cCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCC
Confidence 33 3443 6888775421 24788888889999
Q ss_pred eeEEEeecCcccee
Q psy3272 93 NYSCVADNNLGRAK 106 (115)
Q Consensus 93 ~y~C~~~n~~~~~~ 106 (115)
.|+|.+.|......
T Consensus 229 ~Y~C~a~n~~~~~p 242 (252)
T 3bkj_L 229 SYTCEATHKTSTSP 242 (252)
T ss_dssp EEEEEEECTTCSSC
T ss_pred eEEEEEEeCCCCCC
Confidence 99999999876643
No 162
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.48 E-value=1e-12 Score=82.10 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=58.1
Q ss_pred eEEEEEecCCCCCCeEEEEEeecC-CcceeEEEEE------------------------------ecccCCcEEEEEeCC
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNN-LGRAKKYMEL------------------------------SVSVSDRRLMETRGN 77 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~-~~~~~~~~~v------------------------------~g~~~~~~~~~~~~~ 77 (115)
...|.|.+++.+|+|.|.|.+... .+.....+.| .|.|.+.+.|..++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~ 157 (313)
T 4fqp_A 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLG 157 (313)
T ss_dssp BCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTC
T ss_pred ceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCc
Confidence 357999999999999999988643 3333333322 467888999987542
Q ss_pred ------------------eEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 78 ------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 78 ------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
...|.|......|.|.|+|.|.|..+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~ 204 (313)
T 4fqp_A 158 GMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKP 204 (313)
T ss_dssp CEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSC
T ss_pred cccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCcc
Confidence 12588888888999999999999876643
No 163
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.47 E-value=3.8e-13 Score=69.50 Aligned_cols=51 Identities=27% Similarity=0.536 Sum_probs=44.3
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
.|.|+|+|||.+|.. ..++..........|.|.++..+|+|.|.|.+.+..
T Consensus 24 ~p~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 74 (84)
T 2lu7_A 24 GGPVRWYKDGERLAS--QGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDS 74 (84)
T ss_dssp STTCEEEETTEECCC--CSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTTC
T ss_pred CcEEEEEECCEEccc--cccEEEeecCCeEEEEecCCCCcccEEEEEEECCEE
Confidence 378999999999988 788877777777899999999999999999997643
No 164
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.47 E-value=1.8e-12 Score=77.45 Aligned_cols=94 Identities=10% Similarity=0.104 Sum_probs=64.5
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc-----c--eeEEEEE---------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG-----R--AKKYMEL--------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~-----~--~~~~~~v--------------------------- 62 (115)
.++.+... .....|.|.+++.+|+|.|.|.+.+..+ . ....+.|
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 147 (222)
T 1q9r_B 68 GRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTL 147 (222)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEE
T ss_pred CceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEE
Confidence 45554432 3467899999999999999999987532 1 0112222
Q ss_pred ----ec-ccCC-cEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 63 ----SV-SVSD-RRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 63 ----~g-~~~~-~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.| .|.| .+.|..++. ...|.|..+...| |.|+|.|.|..+.......+.+
T Consensus 148 ~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~i~~ 221 (222)
T 1q9r_B 148 GCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 221 (222)
T ss_dssp EEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEccEECCCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEeccC
Confidence 34 3777 788865542 1247888888889 9999999999998766655543
No 165
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.47 E-value=6.8e-13 Score=79.26 Aligned_cols=92 Identities=12% Similarity=0.152 Sum_probs=63.4
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcc-----eeEEEEE-----------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGR-----AKKYMEL----------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-----~~~~~~v----------------------------- 62 (115)
.++.+... .....|.|.+++.+|+|.|.|.+.+..+. ....+.|
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C 147 (220)
T 1pz5_B 68 GRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGC 147 (220)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEE
T ss_pred CcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEE
Confidence 45554432 23568999999999999999999875321 1112222
Q ss_pred --ecc-cCC-cEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 63 --SVS-VSD-RRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 --~g~-~~~-~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.|. |.| .+.|..++. ...|.|......| |.|+|.|.|..+..++.+.+
T Consensus 148 ~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~ 217 (220)
T 1pz5_B 148 LVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIKEI 217 (220)
T ss_dssp EEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred EEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeeecC
Confidence 344 777 888866543 1347787777756 99999999999987776543
No 166
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.47 E-value=2.2e-12 Score=78.61 Aligned_cols=86 Identities=20% Similarity=0.212 Sum_probs=58.4
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCccee---E--EEE----------------------------E-
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRAK---K--YME----------------------------L- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~---~--~~~----------------------------v- 62 (115)
.++.+... .....|.|.+++.+|+|.|.|.+.+..+... . .+. +
T Consensus 67 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~ 146 (253)
T 3uzq_A 67 GKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVS 146 (253)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEEC
T ss_pred CcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEe
Confidence 45554432 2356799999999999999999987332210 0 111 1
Q ss_pred -----------ecccCC----cEEEEEeC-----------------------------CeEEEEEeccCCCCCeeeEEEe
Q psy3272 63 -----------SVSVSD----RRLMETRG-----------------------------NKHTLTIKNVQSTDFGNYSCVA 98 (115)
Q Consensus 63 -----------~g~~~~----~~~~~~~~-----------------------------~~~~l~i~~~~~~d~G~y~C~~ 98 (115)
.+.+.+ .+.|.+.. ....|.|.++..+|+|.|+|.+
T Consensus 147 ~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 226 (253)
T 3uzq_A 147 LGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQR 226 (253)
T ss_dssp TTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEE
Confidence 334444 77887631 1236999999999999999999
Q ss_pred ecCccc
Q psy3272 99 DNNLGR 104 (115)
Q Consensus 99 ~n~~~~ 104 (115)
.|..+.
T Consensus 227 ~n~~~~ 232 (253)
T 3uzq_A 227 SNEVPW 232 (253)
T ss_dssp CSSSSC
T ss_pred ccCCCc
Confidence 996543
No 167
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=9.4e-13 Score=70.07 Aligned_cols=64 Identities=20% Similarity=0.242 Sum_probs=51.1
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEeccc
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSVSV 66 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g~~ 66 (115)
.|.|+|+|+|.++.. ..++.+........|.|.++..+|+|.|.|.+.|........|.|...|
T Consensus 34 ~p~v~W~k~g~~l~~--~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 34 NIPGKWTKNGLPVQE--SDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAYNVTLPAKVHVISGP 97 (100)
T ss_dssp CCCEEEEETTEECCC--CSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSSCCCEEEEEEEECCS
T ss_pred CCeEEEEECCEECCC--CCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCCCeeEEEEEEEeCCC
Confidence 378999999999987 7888777666678999999999999999999998733344466665433
No 168
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.45 E-value=5.8e-13 Score=82.11 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=69.7
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE------------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL------------------ 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v------------------ 62 (115)
.|.|++++.... ..........|.|.+++.+|+|.|.|.+.+..+.... .|.|
T Consensus 31 ~v~W~~~~~~~~-------~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~ 103 (289)
T 3ejj_X 31 SVEWDGPISPYW-------TLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVE 103 (289)
T ss_dssp CCEEECSCSSSS-------EECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEET
T ss_pred cEEEccCCCceE-------EEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEec
Confidence 589997764221 1112235678999999999999999999876655444 3443
Q ss_pred ----------ecccCCc-EEEEEeCC-------------eEEEEEeccCCCCCeeeEEEee-cCccceeeEEEEEEe
Q psy3272 63 ----------SVSVSDR-RLMETRGN-------------KHTLTIKNVQSTDFGNYSCVAD-NNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ----------~g~~~~~-~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~~~-n~~~~~~~~~~l~v~ 114 (115)
.|.+.+. +.|...+. ...|.|.++..+|.|.|+|.+. +..+..+..+.|.|.
T Consensus 104 g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~ 180 (289)
T 3ejj_X 104 GQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVN 180 (289)
T ss_dssp TSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEE
Confidence 2344443 88865321 2369999999999999999999 655666666667664
No 169
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.44 E-value=8.3e-12 Score=77.07 Aligned_cols=51 Identities=31% Similarity=0.530 Sum_probs=36.4
Q ss_pred cceEEEECCE-----EeC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDTF-----LIE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~~-----~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|+|++. .+. .....++..........|.|.+++.+|+|.|.|.+.+.
T Consensus 42 ~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 104 (276)
T 3auv_A 42 TAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYT 104 (276)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEEEecC
Confidence 6799998642 111 00134666555556678999999999999999999874
No 170
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.44 E-value=1.1e-11 Score=75.67 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=62.0
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCC----ccee----EE-----------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNL----GRAK----KY----------------------------- 59 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~----~~~~----~~----------------------------- 59 (115)
.++.+... .....|+|.+++.+|+|.|.|.+.+.. .... ..
T Consensus 68 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 147 (256)
T 3umt_A 68 GKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSS 147 (256)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSE
T ss_pred ceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCe
Confidence 45554432 345679999999999999999998761 1000 01
Q ss_pred EEE------------ecccCCcEEEEEeC-----------------------------CeEEEEEeccCCCCCeeeEEEe
Q psy3272 60 MEL------------SVSVSDRRLMETRG-----------------------------NKHTLTIKNVQSTDFGNYSCVA 98 (115)
Q Consensus 60 ~~v------------~g~~~~~~~~~~~~-----------------------------~~~~l~i~~~~~~d~G~y~C~~ 98 (115)
+.+ .+.+.+.+.|.+.. ....|.|.++..+|+|.|+|.+
T Consensus 148 ~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 227 (256)
T 3umt_A 148 LSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQ 227 (256)
T ss_dssp EEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEE
T ss_pred EEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEE
Confidence 111 34566678887631 1235999999999999999999
Q ss_pred ecCccce-eeEEEEEE
Q psy3272 99 DNNLGRA-KKYMELSE 113 (115)
Q Consensus 99 ~n~~~~~-~~~~~l~v 113 (115)
.|..... .....|.|
T Consensus 228 ~~~~~~~fg~gt~L~V 243 (256)
T 3umt_A 228 YASSPPTFGGGTKLEI 243 (256)
T ss_dssp CSSSSCEECCCEEEEE
T ss_pred eeCCCcEECCCEEEEE
Confidence 9965432 22344544
No 171
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.44 E-value=2.9e-12 Score=78.76 Aligned_cols=97 Identities=11% Similarity=0.112 Sum_probs=62.1
Q ss_pred cceEEEECCEEeCCCCCCCEE-EEEeCCeEEEEEecCCCCCCeEEEEEeecCCc-------ceeEEEEEec---------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRL-METRGNKHTLTIKNVQSTDFGNYSCVADNNLG-------RAKKYMELSV--------- 64 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-------~~~~~~~v~g--------- 64 (115)
+.+.|||+|..+.. ..... .........|.|.+++.+|+|.|.|.+.+... .....|.|.+
T Consensus 35 ~~~~W~k~g~~~~~--~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~ 112 (257)
T 1b6u_A 35 QHFLLHREGKFKDT--LHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSA 112 (257)
T ss_dssp SEEEEEEESTTCEE--EEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEEC
T ss_pred cEEEEEECCCCCCc--ceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEc
Confidence 57899999864421 00000 00012357899999999999999999974321 1111344311
Q ss_pred -------------------ccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCc
Q psy3272 65 -------------------SVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 65 -------------------~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
.+.+.+.|.+++. ...|.|.+++ |.|.|+|.+.|..
T Consensus 113 ~p~~~V~~G~~vtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~ 183 (257)
T 1b6u_A 113 QPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRD 183 (257)
T ss_dssp SSCTTCBTTCEEEEEEECSSCCSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSS
T ss_pred cCCCccCCCCEEEEEEeCCCCCcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCC
Confidence 2235677877542 4579999998 9999999999753
No 172
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.44 E-value=4.7e-12 Score=76.78 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=60.4
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE--------------------------ec-ccCC-cEEEEEeCC-
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL--------------------------SV-SVSD-RRLMETRGN- 77 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v--------------------------~g-~~~~-~~~~~~~~~- 77 (115)
...|.|.+++.+|+|.|.|.+.+..+.... .|.| .| .|.+ .+.|.+++.
T Consensus 81 ~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~ 160 (248)
T 3pv7_A 81 DASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQVGMKENEDKYMCESSGFYPEAINITWEKQTQK 160 (248)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC--------CEEEEEEEEEBSSCCEEEEEEECSS
T ss_pred cEEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCCccccCCCcEEEEEEccEECCCeEEEEEECCcc
Confidence 345999999999999999999887654443 3333 34 6788 899988763
Q ss_pred --------------------------eEEEEEeccCCCCCeeeEEEeecCccc--eeeEEEEEE
Q psy3272 78 --------------------------KHTLTIKNVQSTDFGNYSCVADNNLGR--AKKYMELSE 113 (115)
Q Consensus 78 --------------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~--~~~~~~l~v 113 (115)
...|.|......|.|.|+|.+.|..+. ....+.|.|
T Consensus 161 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 161 FPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp SCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred CCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 125777778888999999999999887 333444443
No 173
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.43 E-value=1.5e-13 Score=94.57 Aligned_cols=103 Identities=25% Similarity=0.305 Sum_probs=35.5
Q ss_pred cceEEEECCEEeCCCCCCCEEE--------EEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE---------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLM--------ETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL--------- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~--------~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v--------- 62 (115)
+.+.|++++..+.. ...... ........|.|.++..+|+|.|.|.+.+..+.... .+.|
T Consensus 256 ~~~~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~ 333 (772)
T 3v2a_R 256 IDFNWEYPSSKHQH--KKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFG 333 (772)
T ss_dssp CEEEEECC----------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC----
T ss_pred eeEEEecCCccCCC--ceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEec
Confidence 46899999886543 222111 01123568999999999999999999987665444 3433
Q ss_pred ---------------------ecccCCcEEEEEeCC----------eEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 63 ---------------------SVSVSDRRLMETRGN----------KHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 63 ---------------------~g~~~~~~~~~~~~~----------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..|...
T Consensus 334 ~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 408 (772)
T 3v2a_R 334 SGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEK 408 (772)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred cCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEccceeEEEecCChhcCceEEEEEEECCcCeE
Confidence 446777888877652 26799999999999999999999988643
No 174
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.43 E-value=1.8e-11 Score=74.17 Aligned_cols=51 Identities=27% Similarity=0.443 Sum_probs=36.3
Q ss_pred cceEEEECC--EE---eC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--FL---IE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|+|+. .. +. .....++..........|.|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~ 93 (242)
T 2znx_A 31 NNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNS 93 (242)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEeEecC
Confidence 689999953 11 10 00134666554556778999999999999999999875
No 175
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.43 E-value=5.2e-12 Score=79.39 Aligned_cols=106 Identities=10% Similarity=0.111 Sum_probs=61.7
Q ss_pred ceEEEECCEEeCCCCCCCEEEEE-----eCCeEEEEEecCCCCCCeEEEEEeecCCcce---eEE------------EEE
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMET-----RGNKHTLTIKNVQSTDFGNYSCVADNNLGRA---KKY------------MEL 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~---~~~------------~~v 62 (115)
.|+|+++|.++.. ........ ......|.|.....+|.|.|.|.+.+..+.. ... +.+
T Consensus 150 ~v~W~k~g~~l~~--~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~ 227 (327)
T 2wng_A 150 TLKWFKNGNELSD--FQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEV 227 (327)
T ss_dssp EEEEEETTEECCC--EEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEE
T ss_pred EEEEEECCEEccc--cccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEE
Confidence 7999999998864 21100000 0013457777776677899999999865442 111 111
Q ss_pred -----------------ecccCC--cEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 63 -----------------SVSVSD--RRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 63 -----------------~g~~~~--~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
.|.+++ .+.|.+++.. ..|.|..+..+|.|.|+|.|.|..+
T Consensus 228 ~~~~~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~ 307 (327)
T 2wng_A 228 TQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQ 307 (327)
T ss_dssp EEECCSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTC
T ss_pred ecCCcCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCC
Confidence 454443 6888876531 2477888888999999999999998
Q ss_pred ce-eeEEE
Q psy3272 104 RA-KKYME 110 (115)
Q Consensus 104 ~~-~~~~~ 110 (115)
.. .+.+.
T Consensus 308 ~~~s~~~~ 315 (327)
T 2wng_A 308 PAVSKSHD 315 (327)
T ss_dssp CCEEEEEE
T ss_pred CCchhheE
Confidence 73 43433
No 176
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.42 E-value=1.9e-12 Score=81.35 Aligned_cols=103 Identities=14% Similarity=0.164 Sum_probs=66.1
Q ss_pred cceEEEECCEEeC-------CCCCCCEEEEEe-----CCeEEEEEecCCCCCCeEEEEEeecCCcce-------eEEEEE
Q psy3272 2 GMMSWYQDTFLIE-------PSVSDRRLMETR-----GNKHTLTIKNVQSTDFGNYSCVADNNLGRA-------KKYMEL 62 (115)
Q Consensus 2 p~v~W~~~~~~~~-------~~~~~~~~~~~~-----~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-------~~~~~v 62 (115)
|.|+|+|++.+.. .....++..... .....|.|.+++.+|+|.|.|.+.+..+.. ...+.|
T Consensus 34 ~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V 113 (327)
T 2wng_A 34 GPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSV 113 (327)
T ss_dssp CCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEE
T ss_pred ceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEE
Confidence 6899999875321 000123322111 345679999999999999999998865421 113333
Q ss_pred ----------------------------ecccCC--cEEEEEeCC--------------------eEEEEEeccCCCCCe
Q psy3272 63 ----------------------------SVSVSD--RRLMETRGN--------------------KHTLTIKNVQSTDFG 92 (115)
Q Consensus 63 ----------------------------~g~~~~--~~~~~~~~~--------------------~~~l~i~~~~~~d~G 92 (115)
.|.|++ .+.|.+++. ...|.|......|.|
T Consensus 114 ~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g 193 (327)
T 2wng_A 114 RAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHS 193 (327)
T ss_dssp EBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGC
T ss_pred EecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCc
Confidence 445555 788877542 114666666666689
Q ss_pred eeEEEeecCccc
Q psy3272 93 NYSCVADNNLGR 104 (115)
Q Consensus 93 ~y~C~~~n~~~~ 104 (115)
.|+|.+.|..+.
T Consensus 194 ~Y~C~a~n~~~~ 205 (327)
T 2wng_A 194 QVICEVAHVTLQ 205 (327)
T ss_dssp EEEEEEECTTSC
T ss_pred eEEEEEeccccC
Confidence 999999998775
No 177
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.42 E-value=1.4e-11 Score=78.79 Aligned_cols=105 Identities=18% Similarity=0.318 Sum_probs=74.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE--EEEec---------------
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY--MELSV--------------- 64 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~--~~v~g--------------- 64 (115)
|.|+|++++..+......++..........|.|.++..+|+|.|.|.+.|..+..... +.+..
T Consensus 130 ~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~~~~~~~~~~ 209 (389)
T 2jll_A 130 ASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIELSQ 209 (389)
T ss_dssp CEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCEEEEEEEECS
T ss_pred CeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCcceEEeeccC
Confidence 6899999999987632345655555567889999999999999999999988776652 32211
Q ss_pred ---------------ccCCcE--EEEEeC-----------CeEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 65 ---------------SVSDRR--LMETRG-----------NKHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 65 ---------------~~~~~~--~~~~~~-----------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
.|...+ .|...+ ....+.|.++...+.|.|+|.|.|..|...
T Consensus 210 ~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~ 279 (389)
T 2jll_A 210 TTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGD 279 (389)
T ss_dssp SCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCC
T ss_pred CEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCC
Confidence 111111 122211 124689999999999999999999998643
No 178
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.42 E-value=2.2e-12 Score=71.32 Aligned_cols=60 Identities=17% Similarity=0.273 Sum_probs=48.1
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeC-------CeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRG-------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
.|.|+|+|||.+|.. ..++...... ....|.|.++...|+|.|+|.|.|..|.....+.+
T Consensus 29 ~P~I~W~knG~~l~~--~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l 95 (126)
T 1he7_A 29 APSLRWLFNGSVLNE--TSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 95 (126)
T ss_dssp CCEEEEEETTEECCC--CSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEECCEECCC--CCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEEE
Confidence 489999999999987 6654433221 24689999999999999999999999998876555
No 179
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.42 E-value=4e-12 Score=77.66 Aligned_cols=25 Identities=20% Similarity=0.446 Sum_probs=22.6
Q ss_pred EEEEeccCCCCCeeeEEEeecCccc
Q psy3272 80 TLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 80 ~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.|.|.++..+|+|.|+|.+.|..|.
T Consensus 211 ~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 211 FLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp EEEESSCCGGGCEEEEEEEEEETTE
T ss_pred EEEECCCCHHHCEEEEEEecCCCCc
Confidence 7999999999999999999997553
No 180
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=3.4e-12 Score=69.13 Aligned_cols=65 Identities=20% Similarity=0.275 Sum_probs=52.6
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecccC
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSVS 67 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~ 67 (115)
.|.|+|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.|..+.... .|.|.+.|.
T Consensus 36 ~p~i~W~k~~~~~~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 36 PITCTWMKFRKQIQE--SEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp SCEEEEEESSSBCCC--SSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEECSCS
T ss_pred CCEEEEEECCEECcC--CCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEECCCC
Confidence 378999999998876 66777666566789999999999999999999998887766 566655443
No 181
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.41 E-value=1.2e-12 Score=68.83 Aligned_cols=50 Identities=24% Similarity=0.184 Sum_probs=43.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.|+|+|+|.++.. ..++.+........|.|.++..+|+|.|.|.+.|..
T Consensus 34 ~~v~W~k~g~~i~~--~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~~ 83 (93)
T 1waa_A 34 VHGQWKLKGQPLAA--SPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTK 83 (93)
T ss_dssp CCCEEEETTEECCC--BTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTEE
T ss_pred CeEEEEECCEECcC--CCCEEEEEECCEEEEEECCCChhhCEEEEEEECCCc
Confidence 68999999999987 778877666677899999999999999999998743
No 182
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.40 E-value=4.1e-12 Score=82.84 Aligned_cols=107 Identities=9% Similarity=0.066 Sum_probs=72.8
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee----------EEEEE----------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK----------KYMEL---------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~----------~~~~v---------- 62 (115)
.|+|+|++.++.. .... .......|.|.++..+|.|.|+|.+.+..+... ..+.|
T Consensus 120 ~v~W~k~g~~l~~--~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~ 194 (450)
T 1z7z_I 120 TVVLLRGEKELKR--EPAV---GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQL 194 (450)
T ss_dssp EEEEEETTEEEEE--EECC---TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEE
T ss_pred EEEEeeCCEEeec--cccc---ccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEe
Confidence 7899999998764 2110 012356899999999999999999987643211 01111
Q ss_pred ------------------ecc-c--CCcEEEEEeCCe-----------EEEE-EeccCCCCCe--eeEEEeecCccceee
Q psy3272 63 ------------------SVS-V--SDRRLMETRGNK-----------HTLT-IKNVQSTDFG--NYSCVADNNLGRAKK 107 (115)
Q Consensus 63 ------------------~g~-~--~~~~~~~~~~~~-----------~~l~-i~~~~~~d~G--~y~C~~~n~~~~~~~ 107 (115)
.|. | .+.+.|..++.. ..+. ..++..+|.| .|+|.+.|..|....
T Consensus 195 ~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~ 274 (450)
T 1z7z_I 195 VSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQET 274 (450)
T ss_dssp ECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCCEEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEE
T ss_pred cCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCceEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEE
Confidence 445 5 677788765421 1111 2267899999 999999999998877
Q ss_pred EEEEEEe
Q psy3272 108 YMELSEL 114 (115)
Q Consensus 108 ~~~l~v~ 114 (115)
.+.|.|.
T Consensus 275 ~~~l~V~ 281 (450)
T 1z7z_I 275 LQTVTIY 281 (450)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7777664
No 183
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.40 E-value=1.8e-12 Score=80.17 Aligned_cols=99 Identities=21% Similarity=0.341 Sum_probs=69.6
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce-eEEEEE-------------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA-KKYMEL------------------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~~~~v------------------- 62 (115)
.|+|++++..+.. .. ..+..|.|.++..+|+|.|.|.+.+ +.. ...+.|
T Consensus 39 ~i~W~~~~~~~~~--------~~-~~~~~L~i~~~~~~d~G~Y~C~~~n--g~~~~~~l~V~~~~~~~~~~~~~~~~~g~ 107 (290)
T 2o26_X 39 FVRWTFKTYFNEM--------VE-NKKNEWIQEKAEATRTGTYTCSNSN--GLTSSIYVFVRDPAKLFLVGLPLFGKEDS 107 (290)
T ss_dssp EEEEEEECSSSCE--------EE-ECSSEEEETTCCGGGCEEEEEEESS--SCEEEEEEEEECSSCCBCCCCCEEEETTS
T ss_pred cEEEecCCcceee--------ec-CCCceEEEeccCHHhCeEEEEEeeC--CccEEEEEEEeCCCcccccccceEEecCC
Confidence 5899999875511 11 1238899999999999999999988 322 224444
Q ss_pred --------ecccC-CcEEEEE-eCC------------eEEEEEeccCCCCCe-eeEEEeecCcccee-eEEEEEE
Q psy3272 63 --------SVSVS-DRRLMET-RGN------------KHTLTIKNVQSTDFG-NYSCVADNNLGRAK-KYMELSE 113 (115)
Q Consensus 63 --------~g~~~-~~~~~~~-~~~------------~~~l~i~~~~~~d~G-~y~C~~~n~~~~~~-~~~~l~v 113 (115)
. .|. +.+.|.. ++. ...|.|.++..+|.| .|+|.+.|..+... ..+.|.|
T Consensus 108 ~v~l~C~~~-~p~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V 181 (290)
T 2o26_X 108 DALVRCPLT-DPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKV 181 (290)
T ss_dssp CEEECCCBS-CCSCEEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEeCcCC-CCCCceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEE
Confidence 2 355 6788854 221 137999999999999 99999999866533 2455554
No 184
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.40 E-value=1.3e-11 Score=75.26 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=26.6
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
.++.+... .....|+|.+++.+|+|.|.|.+.+.
T Consensus 72 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 107 (256)
T 3juy_B 72 DRVTFTADTSANTAYMELRSLRSADTAVYYCARVGE 107 (256)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCC
T ss_pred ceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEec
Confidence 45555422 34568999999999999999999875
No 185
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.40 E-value=5e-13 Score=70.04 Aligned_cols=49 Identities=31% Similarity=0.601 Sum_probs=43.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|+|+|||.++.. .+++.+........|.|.++..+|+|.|.|.+.+.
T Consensus 35 ~~v~W~k~g~~i~~--~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 83 (91)
T 2lvc_A 35 APVRWYKDGQEVEE--SDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE 83 (91)
T ss_dssp SCCEEEETTSCCCC--CSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC
T ss_pred cEEEEEECCEEeee--eeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce
Confidence 68999999999987 78887777777889999999999999999999764
No 186
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.40 E-value=5.1e-12 Score=76.05 Aligned_cols=94 Identities=7% Similarity=0.094 Sum_probs=62.3
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcce---eEEEEE-------------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRA---KKYMEL------------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~---~~~~~v------------------------------- 62 (115)
.|+.+... .....|.|.+++.+|+|.|.|.+.+..... ...|.|
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 145 (227)
T 1mju_H 66 NKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLV 145 (227)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEE
T ss_pred CcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEe
Confidence 45554432 346789999999999999999997642110 001211
Q ss_pred ec-ccCC-cEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 63 SV-SVSD-RRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 63 ~g-~~~~-~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.| .|.+ .+.|..++. ...|.|..+...| |.|+|.|.|..+.......+.+
T Consensus 146 ~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~ 215 (227)
T 1mju_H 146 KGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEP 215 (227)
T ss_dssp EEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred ecEeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCC
Confidence 33 3555 777765442 1257888888777 9999999998877666555544
No 187
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.39 E-value=2.4e-12 Score=81.65 Aligned_cols=87 Identities=9% Similarity=0.153 Sum_probs=59.0
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE-------------------------------
Q psy3272 18 SDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL------------------------------- 62 (115)
Q Consensus 18 ~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v------------------------------- 62 (115)
..|+.+... .....|.|.+++.+|+|.|.|.+.+..+.... .+.|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 144 (344)
T 1za6_B 65 KGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 144 (344)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE
Confidence 345554432 34578999999999999999999874321111 2222
Q ss_pred ecc-cC-CcEEEEEeCCe-------------------EEEEEeccCCCCCeeeEEEeecCccce
Q psy3272 63 SVS-VS-DRRLMETRGNK-------------------HTLTIKNVQSTDFGNYSCVADNNLGRA 105 (115)
Q Consensus 63 ~g~-~~-~~~~~~~~~~~-------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~ 105 (115)
.|. |. +.+.|.+++.. ..|.|..+...| |.|+|.|.|..+..
T Consensus 145 ~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~ 207 (344)
T 1za6_B 145 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 207 (344)
T ss_dssp EEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTE
T ss_pred eeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCc
Confidence 344 54 57888654421 257888887777 99999999998864
No 188
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.38 E-value=1.7e-11 Score=74.32 Aligned_cols=51 Identities=27% Similarity=0.505 Sum_probs=36.2
Q ss_pred cceEEEECC--EE---eC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--FL---IE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|+|+. .. +. .....++..........|.|.+++.+|+|.|.|.+.+.
T Consensus 36 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~ 98 (247)
T 1svz_A 36 TYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSH 98 (247)
T ss_dssp BCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 689999842 21 11 00135666555556778999999999999999999875
No 189
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.38 E-value=7.3e-12 Score=66.52 Aligned_cols=61 Identities=21% Similarity=0.410 Sum_probs=51.2
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEe
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELS 63 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~ 63 (115)
.|.|+|+|++..+.. ..++..........|.|.++..+|+|.|.|.+.|..+.... .|.|.
T Consensus 37 ~p~i~W~k~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 37 TAEVKWYHNGVELQE--SSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVT 99 (103)
T ss_dssp CCEEEEEETTEECCC--CSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEEECCEECCC--CCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 378999999999987 67777766667789999999999999999999998887766 45543
No 190
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.37 E-value=1.6e-11 Score=76.04 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=27.2
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
.++.+... .....|.|.+++.+|+|.|.|.+.+..
T Consensus 92 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~ 128 (282)
T 1qok_A 92 GKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPT 128 (282)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred CcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCC
Confidence 45554432 245789999999999999999998764
No 191
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.36 E-value=1.8e-11 Score=74.89 Aligned_cols=102 Identities=15% Similarity=0.220 Sum_probs=68.0
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecC---CCCCCeE--EEEEeecCCcceeE--EEEE-------------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNV---QSTDFGN--YSCVADNNLGRAKK--YMEL------------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d~G~--y~C~~~~~~~~~~~--~~~v------------- 62 (115)
.|+|+|++..+.. ... ..+..+.+... ...|.|. |.|.+.+..+.... .|.|
T Consensus 37 ~v~W~k~~~~l~~------~~~--~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~ 108 (265)
T 2oz4_A 37 QVHLALGDQRLNP------TVT--YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKP 108 (265)
T ss_dssp EEEEEETTEECCC------EEE--ECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCS
T ss_pred EEEEEeCCEECCc------eEe--eCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceeecCCc
Confidence 8999999988754 111 12234444444 7788885 99999988766544 4444
Q ss_pred ------------ecccCCcEEEEEeC-------CeEEEEEeccCCCCCeeeEEEeecCc-ccee---eEEEEEEe
Q psy3272 63 ------------SVSVSDRRLMETRG-------NKHTLTIKNVQSTDFGNYSCVADNNL-GRAK---KYMELSEL 114 (115)
Q Consensus 63 ------------~g~~~~~~~~~~~~-------~~~~l~i~~~~~~d~G~y~C~~~n~~-~~~~---~~~~l~v~ 114 (115)
...|.+.+.| ++ ....|.|..+...|.|.|+|.|.|.. |... ..+.|.|.
T Consensus 109 ~v~~G~~v~l~C~~~p~~~i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~ 181 (265)
T 2oz4_A 109 EVSEGTEVTVKCEAHPRAKVTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL 181 (265)
T ss_dssp EEETTCEEEEEEECCTTSEEEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEE
T ss_pred eecCCCcEEEEEEccCCCEEEE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEE
Confidence 1236667777 43 24568899999999999999998544 5544 55556553
No 192
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.36 E-value=6.4e-12 Score=74.82 Aligned_cols=95 Identities=12% Similarity=0.136 Sum_probs=58.7
Q ss_pred CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc------eeEEEEE-----------------------------
Q psy3272 18 SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR------AKKYMEL----------------------------- 62 (115)
Q Consensus 18 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~------~~~~~~v----------------------------- 62 (115)
..++.+........|.|.+++.+|+|.|.|.+.+..+. ....+.|
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C 142 (215)
T 3nl4_H 63 KGRFTISKTSTTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGC 142 (215)
T ss_dssp TTTEEEEECSSEEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEE
T ss_pred cCCEEEEeeCCEEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEE
Confidence 35566555556778999999999999999999876331 0012222
Q ss_pred --ecccCC--cEEEEEeCC-------------eEEEEE---eccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 63 --SVSVSD--RRLMETRGN-------------KHTLTI---KNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 63 --~g~~~~--~~~~~~~~~-------------~~~l~i---~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.|.+++ .+.|..++. ...+.+ ..+...| |.|+|.+.|..+.......|.+
T Consensus 143 ~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~~ 212 (215)
T 3nl4_H 143 LVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVAP 212 (215)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECCS
T ss_pred EEeeeeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecCC
Confidence 333333 345655432 112333 4566778 9999999999998777666654
No 193
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.36 E-value=8.1e-11 Score=71.75 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=26.4
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
.++.+... .....|+|.+++.+|+|.|.|.+.+.
T Consensus 73 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~ 108 (257)
T 3gkz_A 73 SRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDS 108 (257)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECT
T ss_pred ccEEEEEecCCceEEEEECCCChhhCEEEEEEEecC
Confidence 45554432 34568999999999999999999875
No 194
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.36 E-value=1.4e-11 Score=64.78 Aligned_cols=55 Identities=22% Similarity=0.424 Sum_probs=47.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.|..+....
T Consensus 32 ~~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 86 (97)
T 2bk8_A 32 TQVTWYFGVRQLEN--SEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSS 86 (97)
T ss_dssp CEEEEEETTEECCS--SSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CEEEEEECCEECcC--CCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeE
Confidence 68999999998887 77777665666779999999999999999999998887776
No 195
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.35 E-value=1.4e-11 Score=64.93 Aligned_cols=55 Identities=20% Similarity=0.365 Sum_probs=47.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|+|++..+.. ..++..........|.|.++..+|+|.|.|.+.|..+....
T Consensus 36 p~v~W~~~g~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 90 (99)
T 3puc_A 36 PTAIWTKDGKAITQ--GGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSS 90 (99)
T ss_dssp CEEEEEETTEECCS--SSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CEEEEEECCEECcC--CCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeE
Confidence 68999999999887 77777766667779999999999999999999998877665
No 196
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.34 E-value=8.2e-13 Score=81.54 Aligned_cols=87 Identities=15% Similarity=0.160 Sum_probs=61.7
Q ss_pred CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE----------------------------ecccC--CcEEEEE
Q psy3272 27 GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL----------------------------SVSVS--DRRLMET 74 (115)
Q Consensus 27 ~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v----------------------------~g~~~--~~~~~~~ 74 (115)
.....|.|.+++.+|+|.|.|.+.+..+.... .|.| .+ |. +.+.|..
T Consensus 48 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~ 126 (292)
T 4dkd_C 48 GSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVR 126 (292)
T ss_dssp TTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEE
T ss_pred CceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEe
Confidence 45679999999999999999999886544433 3333 22 33 6788877
Q ss_pred eCC-------------eEEEEEeccCCCCCeeeEEEeecCcccee-eEEEEEEe
Q psy3272 75 RGN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAK-KYMELSEL 114 (115)
Q Consensus 75 ~~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~-~~~~l~v~ 114 (115)
.+. ...|.|.++..+|.|.|+|.+.|..+... ..+.|.|.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 180 (292)
T 4dkd_C 127 VRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQ 180 (292)
T ss_dssp GGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEE
T ss_pred cCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEe
Confidence 531 12489999999999999999999877643 36666654
No 197
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.34 E-value=1.2e-11 Score=66.02 Aligned_cols=60 Identities=17% Similarity=0.355 Sum_probs=45.5
Q ss_pred CcceEEEECCEEeCCCCCCCEEEE--Ee---CCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLME--TR---GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~--~~---~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
.|.|+|+|+|.++.. ..+.... .. .....|.|.++..+|+|.|+|.+.|..|.....+.|
T Consensus 30 ~P~i~W~k~g~~l~~--~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l 94 (103)
T 1wwb_X 30 KPALQWFYNGAILNE--SKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISA 94 (103)
T ss_dssp CCEEEEEETTEEECC--CSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEEEEECCEECCC--CCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEE
Confidence 479999999999987 5543221 11 123559999999999999999999999988774443
No 198
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.34 E-value=4.8e-12 Score=85.00 Aligned_cols=100 Identities=19% Similarity=0.214 Sum_probs=68.7
Q ss_pred cceEEEECCEEeCCC----------CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce-eE--EEEE------
Q psy3272 2 GMMSWYQDTFLIEPS----------VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA-KK--YMEL------ 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-~~--~~~v------ 62 (115)
|.|+|+|++..+... ...+..+ .....|.|.+++.+|+|.|+|.+.+..+.. .. .|.|
T Consensus 397 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~---~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~ 473 (581)
T 3o3u_N 397 QRLEWKLNTGRTEAWKVLSPQGGGPWDSVARV---LPNGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGK 473 (581)
T ss_dssp CEEEEEEEETTSSSCEECCSCCSSGGGGTSEE---CTTSCEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCC
T ss_pred ceEEEEEcCCeeEEEEecccCCCCCcCCcEEE---cCCceEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCC
Confidence 689999986532110 0112221 233479999999999999999999877665 22 4444
Q ss_pred -----------------------ec-ccCCcEEEEEeCC--------------------------eEEEEEeccCCCC-C
Q psy3272 63 -----------------------SV-SVSDRRLMETRGN--------------------------KHTLTIKNVQSTD-F 91 (115)
Q Consensus 63 -----------------------~g-~~~~~~~~~~~~~--------------------------~~~l~i~~~~~~d-~ 91 (115)
.| .|.|.+.|.+++. .+.|.|..+.++| .
T Consensus 474 p~i~~~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~ 553 (581)
T 3o3u_N 474 PEIVDSASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPR 553 (581)
T ss_dssp CEEESCCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSC
T ss_pred CEEEcCCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCC
Confidence 33 5888999987541 1258888888565 6
Q ss_pred eeeEEEeecCccc
Q psy3272 92 GNYSCVADNNLGR 104 (115)
Q Consensus 92 G~y~C~~~n~~~~ 104 (115)
|.|+|.++|....
T Consensus 554 ~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 554 PTFSCSFSPGLPR 566 (581)
T ss_dssp CCEEEEEECSSCS
T ss_pred ceEEEEEeccCCC
Confidence 7999999999754
No 199
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.32 E-value=1.4e-11 Score=74.11 Aligned_cols=92 Identities=11% Similarity=0.162 Sum_probs=60.8
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc------c-----eeEEEEE-----------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG------R-----AKKYMEL----------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~------~-----~~~~~~v----------------------- 62 (115)
.|+.+... .....|.|.+++.+|+|.|.|.+.+..+ . ....|.|
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~ 146 (228)
T 3bae_H 67 SRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGS 146 (228)
T ss_dssp GGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCS
T ss_pred CcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCC
Confidence 45554332 2357899999999999999999986532 0 0012222
Q ss_pred --------ecc-cCC-cEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 63 --------SVS-VSD-RRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 --------~g~-~~~-~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.|. |.| .+.|..++. ...|.|......| |.|+|.+.|..+.......+
T Consensus 147 ~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~~~ 222 (228)
T 3bae_H 147 SVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDKKI 222 (228)
T ss_dssp EEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEEC
T ss_pred CEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEEEc
Confidence 233 666 777765442 1247777777755 99999999999886655544
No 200
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.32 E-value=2.6e-12 Score=80.75 Aligned_cols=101 Identities=13% Similarity=0.129 Sum_probs=67.6
Q ss_pred cceEEEECCEEeCCCCCCCE-EEEEeCC----eEEEEEecCCCCCCeEEEEEeecCCcceeEEE-------------EE-
Q psy3272 2 GMMSWYQDTFLIEPSVSDRR-LMETRGN----KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM-------------EL- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~-~~~~~~~----~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~-------------~v- 62 (115)
|.|+|+|+|.++.. .... ....... ...|.|.....+|.|.|.|.+.+..+.....+ .+
T Consensus 41 ~~v~W~k~g~~l~~--~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~ 118 (323)
T 2wqr_A 41 IQITWLEDGQVMDV--DLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLS 118 (323)
T ss_dssp EEEEEEETTEECCG--GGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEEC
T ss_pred eEEEEEECCEEccc--ceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEc
Confidence 47999999998864 2211 1111111 24577877777899999999998654433221 11
Q ss_pred -------------------ecc-cCC---cEEEEEeCC--------------------eEEEEEeccCCCCCeeeEEEee
Q psy3272 63 -------------------SVS-VSD---RRLMETRGN--------------------KHTLTIKNVQSTDFGNYSCVAD 99 (115)
Q Consensus 63 -------------------~g~-~~~---~~~~~~~~~--------------------~~~l~i~~~~~~d~G~y~C~~~ 99 (115)
.|. |.+ .+.|++++. ...|.|.++..+|.|.|+|.+.
T Consensus 119 ~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~ 198 (323)
T 2wqr_A 119 RPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVT 198 (323)
T ss_dssp CCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEE
T ss_pred CCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEE
Confidence 343 445 788877431 1258999999999999999999
Q ss_pred cCccc
Q psy3272 100 NNLGR 104 (115)
Q Consensus 100 n~~~~ 104 (115)
|..+.
T Consensus 199 n~~~~ 203 (323)
T 2wqr_A 199 HPHLP 203 (323)
T ss_dssp CTTSS
T ss_pred CCCCC
Confidence 98744
No 201
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.32 E-value=2.7e-11 Score=64.46 Aligned_cols=63 Identities=21% Similarity=0.439 Sum_probs=48.8
Q ss_pred cceEEEECCEEeCCCCCC--CEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEecccCC
Q psy3272 2 GMMSWYQDTFLIEPSVSD--RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSVSVSD 68 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~ 68 (115)
|.|.|+|++..+.. .. ++.+........|.|.++..+|+|.|.|.+.+ ......|.|.+.|.+
T Consensus 36 ~~v~W~k~g~~l~~--~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n--~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 36 ANVKWFKNGEEIIP--GPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG--GQSSAKLSVDLKSGP 100 (103)
T ss_dssp CCCEEEETTEECCC--STTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT--EEEEEEEEEECCCSC
T ss_pred CeEEEEECCEECCC--CCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC--CcEEEEEEEeCCCCC
Confidence 68999999999877 55 66776666778999999999999999999987 233336666555443
No 202
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.32 E-value=3.9e-11 Score=72.63 Aligned_cols=86 Identities=15% Similarity=0.141 Sum_probs=56.8
Q ss_pred CCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeecCCcc------eeEEEEE-----------------------------
Q psy3272 19 DRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADNNLGR------AKKYMEL----------------------------- 62 (115)
Q Consensus 19 ~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~------~~~~~~v----------------------------- 62 (115)
.++.+.. ......|.|.+++.+|+|.|.|.+.+..+. ....+.|
T Consensus 65 ~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~ 144 (246)
T 4dzb_B 65 DKFLINHASLTLSTLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 144 (246)
T ss_dssp GGEEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CcEEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEE
Confidence 4555432 345678999999999999999999754210 0001111
Q ss_pred -----ecccCC--cEEEEEeCCe--------------------------EEEEEeccCCCC-CeeeEEEeecCccc
Q psy3272 63 -----SVSVSD--RRLMETRGNK--------------------------HTLTIKNVQSTD-FGNYSCVADNNLGR 104 (115)
Q Consensus 63 -----~g~~~~--~~~~~~~~~~--------------------------~~l~i~~~~~~d-~G~y~C~~~n~~~~ 104 (115)
.|.+++ .+.|.+++.. ..|.|.....+| .|.|+|.+.|....
T Consensus 145 L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 145 LVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp EEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred EEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 344444 6788765411 137777777778 89999999998755
No 203
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.31 E-value=1.6e-12 Score=78.12 Aligned_cols=77 Identities=22% Similarity=0.375 Sum_probs=45.9
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCCccee----E----------EEEE-------------------ecc-cCC-cEEE
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNLGRAK----K----------YMEL-------------------SVS-VSD-RRLM 72 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~----~----------~~~v-------------------~g~-~~~-~~~~ 72 (115)
....|.|.+++.+|+|.|.|.+.+..+... . .+.+ .|. |.+ .+.|
T Consensus 91 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 170 (233)
T 3bqu_C 91 TDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKW 170 (233)
T ss_dssp EEEEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEE
T ss_pred CEEEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEE
Confidence 345899999999999999999976542110 0 1111 343 333 6888
Q ss_pred EEeCCe----------------------EEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 73 ETRGNK----------------------HTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 73 ~~~~~~----------------------~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.+++.. ..|.|.....+|.|.|+|.|.|....
T Consensus 171 ~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 171 KIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp EEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred EECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 775421 24778888888999999999998655
No 204
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.31 E-value=3e-10 Score=68.04 Aligned_cols=91 Identities=10% Similarity=0.115 Sum_probs=61.4
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc----c----eeEEEEE--------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG----R----AKKYMEL-------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~----~----~~~~~~v-------------------------- 62 (115)
.|+.+... .....|.|.+++.+|+|.|.|.+.+..+ . ....|.|
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~ 145 (223)
T 1dee_B 66 GRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVA 145 (223)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEE
T ss_pred CeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEE
Confidence 46655432 2357899999999999999999987531 0 0012222
Q ss_pred -----ecc-cCC-cEEEEE-eCC-------------------eEEEEEeccCC--CCCeeeEEEeecCccceeeEE
Q psy3272 63 -----SVS-VSD-RRLMET-RGN-------------------KHTLTIKNVQS--TDFGNYSCVADNNLGRAKKYM 109 (115)
Q Consensus 63 -----~g~-~~~-~~~~~~-~~~-------------------~~~l~i~~~~~--~d~G~y~C~~~n~~~~~~~~~ 109 (115)
.|. |.| .+.|.. ++. ...|.|..... .|.|.|+|.+.|..+.....+
T Consensus 146 L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 146 VGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp EEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred EEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 233 666 788888 432 12467766665 778999999999998866554
No 205
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.30 E-value=2.1e-11 Score=65.13 Aligned_cols=55 Identities=27% Similarity=0.436 Sum_probs=46.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.+..+....
T Consensus 43 p~i~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 97 (107)
T 3irg_B 43 PVVVWEKGGQQLAA--SERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYA 97 (107)
T ss_dssp CEEEEEETTEECCC--CSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CEEEEEECCeECCC--CCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEE
Confidence 68999999998877 67766555566678999999999999999999998877665
No 206
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.30 E-value=3e-11 Score=64.20 Aligned_cols=53 Identities=21% Similarity=0.224 Sum_probs=44.0
Q ss_pred ecccCCcEEEEEeC-----------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 SVSVSDRRLMETRG-----------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ~g~~~~~~~~~~~~-----------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.|.+.|.+++ ....|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 30 ~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 30 TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEEEE
Confidence 56677777776643 345799999999999999999999999999999998863
No 207
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.30 E-value=4.6e-11 Score=62.90 Aligned_cols=56 Identities=27% Similarity=0.306 Sum_probs=45.9
Q ss_pred CcceEEEECCEEeCCCCCCCEEEE-EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLME-TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|.|+|++..+.. ..++... .......|.|.++..+|+|.|.|.+.|..+....
T Consensus 34 ~p~v~W~k~g~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 90 (99)
T 1g1c_A 34 DPECEWYKNGVKIER--SDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSS 90 (99)
T ss_dssp CCEEEEEETTEECCC--CSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCEEEEEECCEECCC--CCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECCCcEEE
Confidence 378999999999886 5555432 3456778999999999999999999999887766
No 208
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.29 E-value=4.1e-11 Score=64.44 Aligned_cols=53 Identities=28% Similarity=0.327 Sum_probs=45.0
Q ss_pred ecccCCcEEEEEeC---------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 SVSVSDRRLMETRG---------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ~g~~~~~~~~~~~~---------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.|.+.|.+++ ....|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 38 ~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 38 LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEEEc
Confidence 67778888887654 344799999999999999999999999998888888863
No 209
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.29 E-value=4.8e-11 Score=77.86 Aligned_cols=88 Identities=11% Similarity=0.119 Sum_probs=60.3
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcce-----eEEEEE-----------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRA-----KKYMEL----------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-----~~~~~v----------------------------- 62 (115)
.|+.+... .....|.|.+++.+|+|.|.|.+.+..+.. ...+.|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C 145 (444)
T 1igt_B 66 GRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGC 145 (444)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEE
Confidence 45554432 346789999999999999999998754220 012222
Q ss_pred --ec-ccCC-cEEEEEeCCe------------------EEEEEeccCCCCCeeeEEEeecCccceee
Q psy3272 63 --SV-SVSD-RRLMETRGNK------------------HTLTIKNVQSTDFGNYSCVADNNLGRAKK 107 (115)
Q Consensus 63 --~g-~~~~-~~~~~~~~~~------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~ 107 (115)
.| .|.| .+.|.+++.. ..|.|..+..+| |.|+|.|.|..+....
T Consensus 146 ~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~ 211 (444)
T 1igt_B 146 LVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKV 211 (444)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEE
T ss_pred EEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcce
Confidence 33 3555 7777654321 257888888889 9999999999987543
No 210
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.29 E-value=3e-11 Score=65.76 Aligned_cols=60 Identities=20% Similarity=0.273 Sum_probs=47.3
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeC----CeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRG----NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
.|.|+|+|+|..+.. ..+....... ....|.|.++..+|+|.|.|.+.|..|.....+.+
T Consensus 34 ~p~i~W~k~g~~l~~--~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 97 (118)
T 1wwc_A 34 PPTLHWLHNGQPLRE--SKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTING 97 (118)
T ss_dssp CCEEEEEETTEECCC--SSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEECCEECCC--CCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEE
Confidence 378999999999887 5554433221 35689999999999999999999999888775554
No 211
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.29 E-value=3.5e-11 Score=72.20 Aligned_cols=90 Identities=11% Similarity=0.111 Sum_probs=60.2
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc-----c--e---eEEEEE-----------------------
Q psy3272 18 SDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG-----R--A---KKYMEL----------------------- 62 (115)
Q Consensus 18 ~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~-----~--~---~~~~~v----------------------- 62 (115)
..|+.+... .....|+|.+++.+|+|.|.|.+.+..+ . . ...|.|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~ 144 (225)
T 1op3_H 65 KGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGG 144 (225)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCC
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCC
Confidence 356655432 3467899999999999999999987642 1 0 112222
Q ss_pred --------ecc-cCC-cEEEEEeCCe-------------------EEEEEeccCCCCCeeeEEEeecCccceeeE
Q psy3272 63 --------SVS-VSD-RRLMETRGNK-------------------HTLTIKNVQSTDFGNYSCVADNNLGRAKKY 108 (115)
Q Consensus 63 --------~g~-~~~-~~~~~~~~~~-------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~ 108 (115)
.|. |.| .+.|..++.. ..|.|......| |.|+|.|.|..+.....
T Consensus 145 ~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 218 (225)
T 1op3_H 145 TAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 218 (225)
T ss_dssp EEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEEEE
T ss_pred cEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCccEE
Confidence 233 555 6777554321 247888888788 99999999987765443
No 212
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.28 E-value=2.2e-10 Score=68.55 Aligned_cols=88 Identities=17% Similarity=0.240 Sum_probs=60.1
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCcce-----eEEEEE-----------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLGRA-----KKYMEL----------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~-----~~~~~v----------------------------- 62 (115)
.|+.+... .....|+|.+++.+|+|.|.|.+.+..+.. ...|.|
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~g~~v~L~C~ 145 (220)
T 2fbj_H 66 DKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLTLPPALSSDPVIIGCL 145 (220)
T ss_dssp TTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEECCCSSSCCSSEEEEEE
T ss_pred CcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEeecccccCCCcEEEEEE
Confidence 56655432 345789999999999999999998753210 012222
Q ss_pred -ecc-cC--CcEEEEEeCCe-------------------EEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 63 -SVS-VS--DRRLMETRGNK-------------------HTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 63 -~g~-~~--~~~~~~~~~~~-------------------~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
.|. |. +.+.|..++.. ..|.|......|.|.|+|.+.|..+...
T Consensus 146 ~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 146 IHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 233 54 56777654421 1478888888899999999999998754
No 213
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.28 E-value=3.4e-11 Score=63.39 Aligned_cols=58 Identities=24% Similarity=0.289 Sum_probs=47.3
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|.|++++..+......++..........|.|.++..+|+|.|.|.+.|..+....
T Consensus 34 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 91 (100)
T 3irg_A 34 TPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSA 91 (100)
T ss_dssp CCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEEeCCCcEEE
Confidence 3689999999988742255666665566789999999999999999999998877665
No 214
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.28 E-value=2.8e-11 Score=68.01 Aligned_cols=43 Identities=21% Similarity=0.389 Sum_probs=35.1
Q ss_pred CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEE
Q psy3272 18 SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 60 (115)
Q Consensus 18 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 60 (115)
..++.+........|.|.++..+|+|.|.|.+.|..|.....+
T Consensus 91 ~~r~~i~~~~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~ 133 (139)
T 1gxe_A 91 EGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNL 133 (139)
T ss_dssp SSSCEEEEETTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEE
T ss_pred CCeEEEEeCCCEEEEEECCCCcccCEEEEEEEEeCCceEEEEE
Confidence 4556655556678899999999999999999999998877643
No 215
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.27 E-value=1.1e-11 Score=77.88 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=65.1
Q ss_pred ceEEEECC-EEeCCCCCCCEEEEEe----CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EE------------EE-
Q psy3272 3 MMSWYQDT-FLIEPSVSDRRLMETR----GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YM------------EL- 62 (115)
Q Consensus 3 ~v~W~~~~-~~~~~~~~~~~~~~~~----~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~------------~v- 62 (115)
.|.|+|++ ..+.. ......... .....|.|.++..+|.|.|.|.+.+....... .+ .+
T Consensus 148 ~i~W~k~~g~~~~~--~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~ 225 (323)
T 2wqr_A 148 QLTWSRASGKPVNH--STRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAF 225 (323)
T ss_dssp EEEEEETTCCCCCC--CCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEE
T ss_pred EEEEEECCCccccc--ccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEe
Confidence 89999975 44332 221111000 02457999999999999999999876532211 11 11
Q ss_pred ------------------ec-ccCC-cEEEEEeCC----------------------eEEEEEeccCCCCCeeeEEEeec
Q psy3272 63 ------------------SV-SVSD-RRLMETRGN----------------------KHTLTIKNVQSTDFGNYSCVADN 100 (115)
Q Consensus 63 ------------------~g-~~~~-~~~~~~~~~----------------------~~~l~i~~~~~~d~G~y~C~~~n 100 (115)
.| .|.+ .+.|.+++. ...|.|..+..+|.|.|+|.|.|
T Consensus 226 ~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n 305 (323)
T 2wqr_A 226 ATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVH 305 (323)
T ss_dssp ECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEEC
T ss_pred CCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEe
Confidence 34 3333 688877542 12588888888999999999999
Q ss_pred Cccc
Q psy3272 101 NLGR 104 (115)
Q Consensus 101 ~~~~ 104 (115)
....
T Consensus 306 ~~~~ 309 (323)
T 2wqr_A 306 EAAS 309 (323)
T ss_dssp TTST
T ss_pred CCCC
Confidence 9876
No 216
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=7.3e-11 Score=64.22 Aligned_cols=55 Identities=11% Similarity=0.184 Sum_probs=44.6
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|+|++..+.. .++..........|.|.++..+|+|.|.|.+.|..+....
T Consensus 53 ~p~i~W~k~g~~l~~---~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~ 107 (118)
T 2e7c_A 53 RPQVVWTKGGAPLDT---SRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTA 107 (118)
T ss_dssp CCEEEEEETTEECCC---SSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECC
T ss_pred CCEEEEEECCEECCC---CcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEE
Confidence 378999999998863 3444445556778999999999999999999998887665
No 217
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.26 E-value=1.9e-10 Score=70.68 Aligned_cols=51 Identities=31% Similarity=0.509 Sum_probs=36.0
Q ss_pred cceEEEEC--CEE---eC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQD--TFL---IE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~--~~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|||. +.. +. .....++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 41 ~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 103 (264)
T 2gjj_A 41 NYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDLAVYYCQQYSN 103 (264)
T ss_dssp ECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 57999985 221 11 00135666554556779999999999999999999764
No 218
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=5.5e-11 Score=63.15 Aligned_cols=62 Identities=19% Similarity=0.376 Sum_probs=48.7
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEecccC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSVSVS 67 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g~~~ 67 (115)
|.|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.+ ......|.|...|.
T Consensus 37 ~~v~W~k~g~~~~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n--~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 37 TPVHWLKDRKAIRK--SQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA--SKSTASLHVEEKAS 98 (103)
T ss_dssp CCCCEEESSCBCCC--SSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS--CEEEEEEEECCCSS
T ss_pred CcEEEEECCEEccC--CCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc--CCcEEEEEEeCCCC
Confidence 67999999998877 6777776666778999999999999999999988 23333666655443
No 219
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.24 E-value=3.8e-10 Score=68.08 Aligned_cols=96 Identities=13% Similarity=0.184 Sum_probs=62.5
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEee--cCCc----c--eeEEEEE-------------------------
Q psy3272 18 SDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVAD--NNLG----R--AKKYMEL------------------------- 62 (115)
Q Consensus 18 ~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~--~~~~----~--~~~~~~v------------------------- 62 (115)
..|+.+... .....|+|.+++.+|+|.|.|.+. +..+ . ....|.|
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~ 143 (232)
T 1dn0_B 64 KSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSS 143 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCS
T ss_pred CCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCc
Confidence 356655432 345689999999999999999997 3200 0 0012222
Q ss_pred -------ec-ccCC-cEEEEE-eCCe-------------------EEEEEeccCC--CCCeeeEEEeecCccceeeEEEE
Q psy3272 63 -------SV-SVSD-RRLMET-RGNK-------------------HTLTIKNVQS--TDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 63 -------~g-~~~~-~~~~~~-~~~~-------------------~~l~i~~~~~--~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.| .|.+ .+.|.. ++.. ..|.|..... .|.|.|+|.+.|..+.......+
T Consensus 144 v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i 223 (232)
T 1dn0_B 144 VAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPL 223 (232)
T ss_dssp EEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEEC
T ss_pred EEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEec
Confidence 22 3665 788887 4421 2467777665 78999999999999987666555
Q ss_pred EE
Q psy3272 112 SE 113 (115)
Q Consensus 112 ~v 113 (115)
.|
T Consensus 224 ~~ 225 (232)
T 1dn0_B 224 PV 225 (232)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 220
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.24 E-value=1.3e-10 Score=71.35 Aligned_cols=51 Identities=27% Similarity=0.498 Sum_probs=36.2
Q ss_pred cceEEEECC--EE---eC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--FL---IE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.|.|||.. .. +. .....++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 50 ~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 112 (268)
T 1x9q_A 50 TYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLGVYFCSQSTH 112 (268)
T ss_dssp BCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCEEEEEEEecC
Confidence 689999853 21 11 00135666554556778999999999999999999865
No 221
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.24 E-value=1.2e-11 Score=66.36 Aligned_cols=55 Identities=31% Similarity=0.519 Sum_probs=47.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.|..+....
T Consensus 44 p~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 98 (106)
T 1nct_A 44 PTVTWLRKGQVLST--SARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEA 98 (106)
T ss_dssp CBCCBCSSSSCCTT--CSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCE
T ss_pred CEEEEEECCEECCC--CCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEE
Confidence 68999999988876 67777666566789999999999999999999998877665
No 222
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.23 E-value=2.6e-10 Score=69.62 Aligned_cols=93 Identities=12% Similarity=0.106 Sum_probs=62.3
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCC----ccee--EEEEE----------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNL----GRAK--KYMEL---------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~----~~~~--~~~~v---------------------------- 62 (115)
.|+.+... .....|+|.+++.+|+|.|.|.+.+.. .... ..+.|
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 145 (253)
T 3liz_H 66 GRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLG 145 (253)
T ss_dssp TTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEE
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEE
Confidence 45554432 346779999999999999999997641 1100 02222
Q ss_pred ---ec-ccCC-cEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEE
Q psy3272 63 ---SV-SVSD-RRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 63 ---~g-~~~~-~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~ 112 (115)
.| .|.+ .+.|..++. ...|.|......| |.|+|.+.|..+.......|.
T Consensus 146 C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~ 217 (253)
T 3liz_H 146 CLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 217 (253)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECC
T ss_pred EEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEec
Confidence 33 5555 677765442 1368888888889 999999999998766655543
No 223
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.23 E-value=7e-11 Score=62.30 Aligned_cols=56 Identities=29% Similarity=0.506 Sum_probs=43.5
Q ss_pred CcceEEEECCEEeCCCCCCCEE-EEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRL-METRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|.|+|++..+.. ..+.. .........|.|.++..+|+|.|.|.+.|..+....
T Consensus 34 ~p~v~W~~~g~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (100)
T 2kdg_A 34 APDVSWYLNGRTVQS--DDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATF 90 (100)
T ss_dssp CCEEEEEETTEEECC--CSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCEEEEEECCEECcC--CCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEE
Confidence 368999999998876 43322 222334568999999999999999999998887766
No 224
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.23 E-value=2.7e-10 Score=69.81 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=25.6
Q ss_pred CCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 19 DRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 19 ~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
.++.+.. ......|.|.+++.+|+|.|.|.+.+
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 121 (268)
T 3pl6_D 88 DRFFAVRPEGSVSTLKIQRTERGDSAVYLCATSA 121 (268)
T ss_dssp TTEEEECTTSSSEEEEECSCCGGGCEEEEEEEES
T ss_pred CcEEEEecCCCEEEEEECCCCcccCEEEEEEEec
Confidence 5555432 22367899999999999999999986
No 225
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.23 E-value=2e-10 Score=70.62 Aligned_cols=90 Identities=9% Similarity=0.069 Sum_probs=59.0
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc-c----eeEEEEE-----------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG-R----AKKYMEL----------------------------- 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~-~----~~~~~~v----------------------------- 62 (115)
.|+.+... .....|+|.+++.+|+|.|.|.+.+..+ . ....|.|
T Consensus 72 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C 151 (261)
T 2xqy_G 72 DKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGC 151 (261)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEE
T ss_pred CcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEE
Confidence 45554432 3467899999999999999999987431 0 0012222
Q ss_pred --ec-ccCC-cEEEEEeCC------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEE
Q psy3272 63 --SV-SVSD-RRLMETRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 109 (115)
Q Consensus 63 --~g-~~~~-~~~~~~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~ 109 (115)
.| .|.+ .+.|..++. ...|.|......| |.|+|.+.|.........
T Consensus 152 ~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~~ 219 (261)
T 2xqy_G 152 LVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDK 219 (261)
T ss_dssp EEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred EEEeEeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEEE
Confidence 23 3555 677755432 1357888888777 999999999876654443
No 226
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.22 E-value=4.2e-11 Score=73.90 Aligned_cols=106 Identities=12% Similarity=0.131 Sum_probs=61.4
Q ss_pred eEEEECCEEeCCCCCCCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeecCCcc---eeEEEEE-----------------
Q psy3272 4 MSWYQDTFLIEPSVSDRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADNNLGR---AKKYMEL----------------- 62 (115)
Q Consensus 4 v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~---~~~~~~v----------------- 62 (115)
|+|++++..+.. +..... ......|.|.++..+|+|.|.|.+.+..+. ....+.|
T Consensus 28 v~W~~~~~~~~~----~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~ 103 (289)
T 3mjg_X 28 VVWERMSQEPPQ----EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEEL 103 (289)
T ss_dssp CEEEBTTBCCSE----EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHH
T ss_pred EEEECCCCCccc----ceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcc
Confidence 899999886632 111000 011478999999999999999999886644 2223332
Q ss_pred -----ec----------ccCCcEEEEEeCCeEEEE------EeccCCCCCeeeEEEeecCcccee-eEEEEEE
Q psy3272 63 -----SV----------SVSDRRLMETRGNKHTLT------IKNVQSTDFGNYSCVADNNLGRAK-KYMELSE 113 (115)
Q Consensus 63 -----~g----------~~~~~~~~~~~~~~~~l~------i~~~~~~d~G~y~C~~~n~~~~~~-~~~~l~v 113 (115)
.| .|.+.+.|.+......+. .......|.|.|+|.|.|..+... ..+.|.|
T Consensus 104 ~~~v~~G~~v~l~C~~~~p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v 176 (289)
T 3mjg_X 104 FIFLTEITEITIPCRVTDPQLVVTLHEKKGDVALPVPYDHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYR 176 (289)
T ss_dssp EEEESSCCCEEECCCBSCTTSCEEEEESSCCSCCCCCEETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEeecCCeEEEEeEcCCCCceEEEEeCCCCCccceeecCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEe
Confidence 01 456677787754111000 001135799999999998776533 3344444
No 227
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.22 E-value=5.6e-11 Score=63.51 Aligned_cols=57 Identities=26% Similarity=0.475 Sum_probs=45.2
Q ss_pred eEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 4 MSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 4 v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.|........+.|
T Consensus 39 v~W~k~g~~~~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~l~V 95 (106)
T 2dlt_A 39 GKWYKNGVEVRP--SKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSLSAKLNF 95 (106)
T ss_dssp EEEEESSCBCCC--CSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETSCCCCCBCEEE
T ss_pred eEEEcCCEECcC--CCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccCCceEEEEEEE
Confidence 999999998877 677776666667899999999999999999999873333334444
No 228
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.22 E-value=6.6e-11 Score=62.29 Aligned_cols=56 Identities=27% Similarity=0.437 Sum_probs=43.5
Q ss_pred CcceEEEECCEEeCCCCCCC-EEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDR-RLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|.|+|++..+.. ... +..........|.|.++..+|+|.|.|.+.|..+....
T Consensus 34 ~p~v~W~k~~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~g~~~~ 90 (99)
T 1u2h_A 34 KPVVSWLRNRQPVRP--DQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQC 90 (99)
T ss_dssp CCEEEEEETTEECCC--BTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCEEEEEECCEECCC--CCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECCCceeE
Confidence 368999999998875 333 33333334458999999999999999999998887766
No 229
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.22 E-value=1.7e-10 Score=62.24 Aligned_cols=46 Identities=22% Similarity=0.560 Sum_probs=40.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEe
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVA 49 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 49 (115)
|.|+|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+
T Consensus 47 p~v~W~k~~~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 47 APVEWWKGHETLRD--GDRHSLRQDGARCELQIRGLVAEDAGEYLCMC 92 (113)
T ss_dssp CCCEEEESSSBCCC--SSSEEEEEETTEEEEEECSCCSTTCEEEEEEE
T ss_pred CcEEEEECCEECCC--CCcEEEEECCCEEEEEECCCChhhCEEEEEEe
Confidence 68999999998887 77887776667789999999999999999999
No 230
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.21 E-value=2.7e-11 Score=72.44 Aligned_cols=101 Identities=13% Similarity=0.200 Sum_probs=62.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEE-----eCCeEEEEEecCCCCCCeEEEEEeecCCcce--eEE------------EEE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMET-----RGNKHTLTIKNVQSTDFGNYSCVADNNLGRA--KKY------------MEL 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~~------------~~v 62 (115)
|.|+|+|++..+.. ........ ......|.|.+++.+|.|.|.|.+.+..+.. ... +.+
T Consensus 45 ~~v~W~k~~~~~~~--~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~ 122 (218)
T 2rgs_A 45 VQISWFVNNVEVHT--AQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYI 122 (218)
T ss_dssp EEEEEEETTEEECC--CEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEE
T ss_pred eEEEEEECCccccC--cccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEE
Confidence 57999999987754 21100000 0123579999999999999999998765432 111 111
Q ss_pred -------------------ec-ccCC-cEEEEEeCCeE--------------------EEEEeccCCCCCeeeEEEeecC
Q psy3272 63 -------------------SV-SVSD-RRLMETRGNKH--------------------TLTIKNVQSTDFGNYSCVADNN 101 (115)
Q Consensus 63 -------------------~g-~~~~-~~~~~~~~~~~--------------------~l~i~~~~~~d~G~y~C~~~n~ 101 (115)
.| .|.+ .+.|.+++... .|.|......|.|.|+|.|.|.
T Consensus 123 ~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~ 202 (218)
T 2rgs_A 123 LPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHE 202 (218)
T ss_dssp ECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECT
T ss_pred ECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcC
Confidence 44 4555 78888765210 1333333334589999999998
Q ss_pred ccc
Q psy3272 102 LGR 104 (115)
Q Consensus 102 ~~~ 104 (115)
...
T Consensus 203 ~l~ 205 (218)
T 2rgs_A 203 GLK 205 (218)
T ss_dssp TSG
T ss_pred CCC
Confidence 765
No 231
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=1.7e-10 Score=61.32 Aligned_cols=59 Identities=20% Similarity=0.397 Sum_probs=46.6
Q ss_pred eEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEeccc
Q psy3272 4 MSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSVSV 66 (115)
Q Consensus 4 v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g~~ 66 (115)
|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.+..+ ...+.|...|
T Consensus 41 v~W~k~g~~~~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~--~~~l~V~~~P 99 (104)
T 2e6p_A 41 ATWYKDGQKVEE--SELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSA--FFGVTVQDPS 99 (104)
T ss_dssp CEEEETTEECCC--BTTBEEEEETTEEEEEESSCCTTTCEEEEEECSSCCC--CEEEEEECCC
T ss_pred cEEeeCCEECCC--CCCEEEEeCCCEEEEEECCCChhhCEEEEEEECCceE--EEEEEEcCCC
Confidence 899999999887 6677666666778999999999999999999988643 3345554433
No 232
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.21 E-value=4.6e-11 Score=62.36 Aligned_cols=55 Identities=18% Similarity=0.370 Sum_probs=43.8
Q ss_pred CcceEEEECC--EEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE
Q psy3272 1 MGMMSWYQDT--FLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY 59 (115)
Q Consensus 1 ~p~v~W~~~~--~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 59 (115)
.|.|+|+|++ ..+.. .. ..........|.|.++..+|+|.|.|.+.|..+.....
T Consensus 31 ~p~i~W~k~~~~~~~~~--~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~ 87 (93)
T 1wit_A 31 DPTATWTVGDSGAALAP--EL--LVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAI 87 (93)
T ss_dssp SCEEEEECSTTTCBCST--TS--EEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCEEEEEECCCCcccCC--cE--EEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEE
Confidence 3789999999 77765 32 22344567889999999999999999999999877663
No 233
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=2.2e-11 Score=64.58 Aligned_cols=48 Identities=21% Similarity=0.491 Sum_probs=40.4
Q ss_pred cceEEEECCEEeCCCCCC----CEEEEEeCCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 2 GMMSWYQDTFLIEPSVSD----RRLMETRGNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
|.|.|+|++..+.. .. ++.+........|.|.++..+|+|.|.|.+.+
T Consensus 37 ~~v~W~k~g~~i~~--~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 88 (101)
T 2edk_A 37 AQVMWMKNGVELTR--EDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG 88 (101)
T ss_dssp CCCEEEESSCBCCC--SCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEECSS
T ss_pred CEEEEEECCEECCC--CCCcceeEEEEECCCEEEEEECCCChhhCEEEEEEEcC
Confidence 68999999998876 44 55666666678899999999999999999987
No 234
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.20 E-value=1.3e-10 Score=60.87 Aligned_cols=47 Identities=30% Similarity=0.519 Sum_probs=40.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEee
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVAD 50 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~ 50 (115)
|.|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.
T Consensus 37 ~~v~W~k~~~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ag 83 (95)
T 2k1m_A 37 VKVRWQRGGSDISA--SNKYGLATEGTRHTLTVREVGPADQGSYAVIAG 83 (95)
T ss_dssp CCCEEECSSSEECS--STTCEEEEETTEEEEEESSCCTTCCSEEEEEET
T ss_pred CeEEEEECCEECCC--CCcEEEEEcCCEEEEEEcCCCcccCEEEEEEEC
Confidence 68999999999887 677777666677899999999999999999993
No 235
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.20 E-value=1.7e-10 Score=61.02 Aligned_cols=47 Identities=32% Similarity=0.490 Sum_probs=41.0
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEe
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVA 49 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~ 49 (115)
.|.|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+
T Consensus 36 ~~~v~W~k~g~~i~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 36 KLEVKWYKNGQEIRP--STKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp TSCEEEEESSCBCCC--BTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEECCEECCC--CCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 368999999998877 67777766667789999999999999999999
No 236
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.20 E-value=1.9e-10 Score=75.31 Aligned_cols=90 Identities=12% Similarity=0.150 Sum_probs=60.8
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc------------c--eeEEEEE-------------------
Q psy3272 18 SDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG------------R--AKKYMEL------------------- 62 (115)
Q Consensus 18 ~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~------------~--~~~~~~v------------------- 62 (115)
..|+.+... .....|.|.+++.+|+|.|.|.+.+..+ . ....+.|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~ 144 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKS 144 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCC
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccc
Confidence 345554432 3457899999999999999999987643 0 1112322
Q ss_pred ------------ecc-cC-CcEEEEEeCC-------------------eEEEEEeccCCCCCeeeEEEeecCccceeeE
Q psy3272 63 ------------SVS-VS-DRRLMETRGN-------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKY 108 (115)
Q Consensus 63 ------------~g~-~~-~~~~~~~~~~-------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~ 108 (115)
.|. |. +.+.|.+++. ...|.|..+..+| |.|+|.|.|..+.....
T Consensus 145 ~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~ 222 (457)
T 1hzh_H 145 TSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 222 (457)
T ss_dssp CTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEE
T ss_pred cCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCccee
Confidence 333 43 5677765441 1258888888889 99999999988765443
No 237
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.20 E-value=1.1e-10 Score=69.23 Aligned_cols=100 Identities=13% Similarity=0.128 Sum_probs=62.3
Q ss_pred ceEEEECCEEeCCCCCCC-EEEEE----eCCeEEEEEecCCCCCCeEEEEEeecCCccee--EEE------------EE-
Q psy3272 3 MMSWYQDTFLIEPSVSDR-RLMET----RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK--KYM------------EL- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~-~~~~~----~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~--~~~------------~v- 62 (115)
.|.|+|++..+.. ... ..... ......|.|.+++.+|+|.|.|.+.+..+... ..+ .+
T Consensus 38 ~v~W~k~~~~~~~--~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~ 115 (207)
T 2vol_A 38 QFSWFVDDVEVHT--AQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTL 115 (207)
T ss_dssp EEEEEETTEEECC--CEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEE
T ss_pred EEEEEECCccccc--cccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEe
Confidence 7999999987653 100 00000 01235799999999999999999987655321 111 11
Q ss_pred ------------------ec-ccC-CcEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCc
Q psy3272 63 ------------------SV-SVS-DRRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 63 ------------------~g-~~~-~~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
.| .|. ..+.|.+++.. ..|.|......|.|.|+|.|.|..
T Consensus 116 ~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~ 195 (207)
T 2vol_A 116 PPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEG 195 (207)
T ss_dssp CCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTT
T ss_pred CCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCC
Confidence 34 344 37888775521 124444445567899999999987
Q ss_pred cc
Q psy3272 103 GR 104 (115)
Q Consensus 103 ~~ 104 (115)
..
T Consensus 196 l~ 197 (207)
T 2vol_A 196 LH 197 (207)
T ss_dssp SG
T ss_pred CC
Confidence 54
No 238
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.20 E-value=3.4e-11 Score=78.57 Aligned_cols=103 Identities=13% Similarity=0.172 Sum_probs=66.3
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEe---CCeEEEEEecCCCCCCeEEEEEeecCCccee--EEE------------EE--
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETR---GNKHTLTIKNVQSTDFGNYSCVADNNLGRAK--KYM------------EL-- 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~--~~~------------~v-- 62 (115)
|.|+|+|++..+............. .....|.|.++..+|.|.|.|.+.+..+... ..+ .+
T Consensus 274 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~ 353 (444)
T 1igt_B 274 VQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLP 353 (444)
T ss_dssp CEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEEC
T ss_pred eEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeC
Confidence 3799999998876421111111100 1246799999999999999999998765441 122 11
Q ss_pred -----------------ec-ccCC-cEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 63 -----------------SV-SVSD-RRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 63 -----------------~g-~~~~-~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
.| .|.+ .+.|.+++.. ..|.|.....+|.|.|+|.|.|...
T Consensus 354 ~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 354 PPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp CCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred CChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 34 4554 7888876521 1345555556679999999999864
Q ss_pred c
Q psy3272 104 R 104 (115)
Q Consensus 104 ~ 104 (115)
.
T Consensus 434 ~ 434 (444)
T 1igt_B 434 H 434 (444)
T ss_dssp G
T ss_pred C
Confidence 4
No 239
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.20 E-value=1.9e-10 Score=61.98 Aligned_cols=61 Identities=21% Similarity=0.311 Sum_probs=46.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEeccc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSVSV 66 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g~~ 66 (115)
|.|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.+ ......|.|...|
T Consensus 42 ~~v~W~k~g~~~~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n--~~~~~~l~V~~~p 102 (113)
T 2cpc_A 42 AEVRWTKDGEEVVE--SPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD--ESASFTVTVTEPP 102 (113)
T ss_dssp CCCEEEETTEECCC--BTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS--CEEEEEEEEECCC
T ss_pred CeEEEEECCEECcc--CCCEEEEECCCEEEEEECCCCcccCEEEEEEEec--CcEEEEEEEecCC
Confidence 68999999999877 6676665555568999999999999999999988 2233356665433
No 240
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.20 E-value=1.2e-10 Score=60.99 Aligned_cols=53 Identities=25% Similarity=0.482 Sum_probs=43.4
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY 59 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 59 (115)
.|.|.|+|+|.++.. ..++... ...|.|.++..+|+|.|.|.+.+..+.....
T Consensus 28 ~p~v~W~k~g~~~~~--~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 80 (95)
T 4hwu_A 28 AAVISWTKDGVHLGP--NNRTVLI----GEYLQIKGATPRDSGLYACTAARTVDSETWI 80 (95)
T ss_dssp TCEEEEEETTEEECC--CSSEEEE----TTEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCEEEEEECCEECCC--CceEEEe----CCEEEECcCCcccCEEEEEEEccCCCcEEEE
Confidence 378999999999877 6665542 3579999999999999999999988766653
No 241
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.19 E-value=1.1e-10 Score=62.40 Aligned_cols=48 Identities=29% Similarity=0.502 Sum_probs=40.9
Q ss_pred cceEEEECCEEeCCCCC-CCEEEEEeCCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 2 GMMSWYQDTFLIEPSVS-DRRLMETRGNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
|.|+|+|+|..+.. . .++.+........|.|.++..+|+|.|.|.+.+
T Consensus 45 ~~v~W~k~g~~l~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 93 (104)
T 1pd6_A 45 AEVKWLKNGQEIQM--SGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGG 93 (104)
T ss_dssp SCCEEEESSSEECC--CSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETT
T ss_pred CEEEEEECCEECCC--CCCeEEEEecCCEEEEEECCCCcccCEEEEEEECC
Confidence 68999999999887 5 677766566677999999999999999999954
No 242
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.19 E-value=9.1e-12 Score=81.10 Aligned_cols=77 Identities=10% Similarity=0.163 Sum_probs=54.2
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcce--eEEEEE-------------------------------ecc-cCC-cEEEE
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRA--KKYMEL-------------------------------SVS-VSD-RRLME 73 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~~~~v-------------------------------~g~-~~~-~~~~~ 73 (115)
...|.|.+++.+|+|.|.|.+.+..... ...+.| .|. |.+ .+.|.
T Consensus 77 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~ 156 (434)
T 1igy_B 77 TANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWN 156 (434)
T ss_dssp BBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEET
T ss_pred EEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEe
Confidence 4579999999999999999997632111 011111 343 555 77776
Q ss_pred EeCC------------------eEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 74 TRGN------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 74 ~~~~------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
+++. ...|.|..+..+| |.|+|.|.|..+...
T Consensus 157 k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~ 206 (434)
T 1igy_B 157 SGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTK 206 (434)
T ss_dssp TTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCC
T ss_pred eCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCcc
Confidence 5442 1358888888889 999999999998743
No 243
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.19 E-value=1.4e-10 Score=60.55 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=44.0
Q ss_pred ecccCCcEEEEEeC--C-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRG--N-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~--~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++ . ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 27 ~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 27 IGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp ECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEEC
Confidence 67778888887766 2 2579999999999999999999999999888888773
No 244
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.18 E-value=5.6e-10 Score=67.34 Aligned_cols=32 Identities=13% Similarity=0.285 Sum_probs=25.1
Q ss_pred CCEEEEE-eCCeEEEEEecCCCCCCeEEEEEee
Q psy3272 19 DRRLMET-RGNKHTLTIKNVQSTDFGNYSCVAD 50 (115)
Q Consensus 19 ~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~ 50 (115)
.++.+.. ......|.|.+++.+|+|.|.|.+.
T Consensus 63 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~ 95 (240)
T 3q5y_A 63 SRFSVQQFDDYHSEMNMSALELEDSAMYFCASS 95 (240)
T ss_dssp TTEEEEECTTSCEEEEECSCCGGGCEEEEEEEE
T ss_pred CeEEEEeCCCCEEEEEECcCChhHCEEEEEEEc
Confidence 4555443 2346789999999999999999996
No 245
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.18 E-value=1.9e-10 Score=62.54 Aligned_cols=66 Identities=21% Similarity=0.322 Sum_probs=48.7
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeC-CeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecccC
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRG-NKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSVS 67 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~ 67 (115)
.|.|.|+|++..+... ..++.+.... ....|.|.++..+|+|.|.|.+.|..+.... .|.|...|.
T Consensus 44 ~p~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 44 PPKLFWKRNNEMVQFN-TDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPN 112 (116)
T ss_dssp CCEEEEEETTEECCCC-BTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEECCSC
T ss_pred CCEEEEEECCEECcCC-CCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEeCCCC
Confidence 3689999999988741 3555544332 3448999999999999999999998887766 455554443
No 246
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=2e-10 Score=60.85 Aligned_cols=48 Identities=25% Similarity=0.522 Sum_probs=41.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
|.|.|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.+
T Consensus 40 ~~v~W~k~g~~~~~--~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~ 87 (102)
T 2eo1_A 40 TEVTWYKDGKKLSS--SSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG 87 (102)
T ss_dssp SCCEEEETTEECCC--CSSEEEEEETTEEEEEETTCCTTTCSCEEEEETT
T ss_pred CceEEEECCEECCC--CCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC
Confidence 68999999999877 6677766666678999999999999999999964
No 247
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.17 E-value=6e-11 Score=62.22 Aligned_cols=51 Identities=20% Similarity=0.458 Sum_probs=42.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|+|++..+.. ..++... ...|.|.++..+|+|.|.|.+.+..+....
T Consensus 38 p~i~W~k~g~~~~~--~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 88 (95)
T 2ckn_A 38 QSINWLRDGVQLVE--SNRTRIT----GEEVEVRDSIPADSGLYACVTSSPSGSDTT 88 (95)
T ss_dssp CEEEEEBTTBCCCC--CSSEEEC----SSEEEESSCCGGGSEEEEEEEEETTEEEEE
T ss_pred CceEEEECCEecCC--CCCEEEe----CCEEEECCCChHHCEEEEEEeccCCCcEEE
Confidence 68999999988876 5665442 568999999999999999999998877665
No 248
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=2.3e-11 Score=65.07 Aligned_cols=58 Identities=16% Similarity=0.174 Sum_probs=45.4
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEec
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSV 64 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g 64 (115)
.|+|+|+|.++.. ..++.+........|.|.++..+|+|.|.|.+.+.. ....|.|..
T Consensus 40 ~v~W~k~g~~i~~--~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~--~~a~L~V~~ 97 (104)
T 2eny_A 40 PAMWTVGGKTVGS--SSRFQATRQGRKYILVVREAAPSDAGEVVFSVRGLT--SKASLIVRE 97 (104)
T ss_dssp CBCCBSSSSBCSB--CSSCEEEEETTEEEEEECSCCTTTCSCEEEEETTEE--EEECEEEEC
T ss_pred eeEEEECCEECCC--CCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECCee--EEEEEEEeC
Confidence 6999999998887 677777666777899999999999999999986532 222455544
No 249
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=2e-10 Score=60.45 Aligned_cols=53 Identities=23% Similarity=0.472 Sum_probs=42.7
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|.|+|++..+.. .... .......|.|.++..+|+|.|.|.+.|..+....
T Consensus 40 ~p~v~W~~~g~~~~~--~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 92 (99)
T 2yr3_A 40 VPRITWLLNGQPIQY--ARST---CEAGVAELHIQDALPEDHGTYTCLAENALGQVSC 92 (99)
T ss_dssp CCCCEEEESSSBCSS--CCCE---EETTEEEEEECSCCTTCCBCEEEEEECSSCEEEE
T ss_pred CCeEEEEECCEECcc--cceE---eeCCeEEEEECCCChhhCEEEEEEEEECCCeEEE
Confidence 368999999988765 3332 2345688999999999999999999998887665
No 250
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.16 E-value=5.5e-10 Score=59.23 Aligned_cols=62 Identities=16% Similarity=0.321 Sum_probs=46.7
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEecccC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSVSVS 67 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g~~~ 67 (115)
|.|+|+|++..+.. ..++.+........|.|.++..+|+|.|.|.+.. ......|.|.+.|.
T Consensus 37 ~~v~W~k~~~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~--~~~~~~l~V~~~p~ 98 (103)
T 2dku_A 37 ATVTWRKGLLELRA--SGKHQPSQEGLTLRLTISALEKADSDTYTCDIGQ--AQSRAQLLVQGRRS 98 (103)
T ss_dssp SCCEEEESSCBCCS--SSSEEEEEETTEEEEEEESCCTTTCSEEEEECSS--CBCCEEEEEECSCC
T ss_pred CeEEEEeCCEECCC--CCeEEEEeCCCEEEEEECCCCcccCEEEEEEeCC--ceEEEEEEEeCccC
Confidence 68999999998877 6777776666677999999999999999998322 22233666655444
No 251
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=3.1e-10 Score=63.74 Aligned_cols=37 Identities=16% Similarity=0.391 Sum_probs=34.2
Q ss_pred EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 79 HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 79 ~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
..|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 103 s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~d 139 (139)
T 1gxe_A 103 SIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVID 139 (139)
T ss_dssp EEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEEC
Confidence 4699999999999999999999999999999998864
No 252
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.16 E-value=3.8e-10 Score=68.90 Aligned_cols=26 Identities=19% Similarity=0.395 Sum_probs=22.4
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
....|.|.+++.+|+|.|.|.+.+..
T Consensus 77 ~~~~L~I~~v~~~DsG~Y~C~~~~~~ 102 (259)
T 3omz_A 77 KNLRMILRNLIENDSGVYYCATWDQN 102 (259)
T ss_dssp CCCEEEESSCCGGGCEEEEEEEECTT
T ss_pred CeEEEEECCCCcccCEEEEEEEeeCC
Confidence 34579999999999999999998654
No 253
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.16 E-value=3.5e-10 Score=69.46 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=27.3
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
.|+.+... .....|.|.+++.+|+|.|.|.+.+..
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~ 102 (257)
T 3bn9_D 66 GRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLT 102 (257)
T ss_dssp TTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCS
T ss_pred CceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCC
Confidence 45555432 346789999999999999999998754
No 254
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2.2e-10 Score=61.46 Aligned_cols=64 Identities=23% Similarity=0.351 Sum_probs=47.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEe-CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEeccc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETR-GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSV 66 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~ 66 (115)
|.|.|+|++..+... ..++.+... .....|.|.++..+|+|.|.|.+.|..+.... .|.|...|
T Consensus 38 p~v~W~k~g~~~~~~-~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~ 104 (110)
T 2dm2_A 38 PKIYWFKDGKQISPK-SDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVN 104 (110)
T ss_dssp CEEEEECSSCBCCTT-CSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEEECCS
T ss_pred CEEEEEECCEECCCC-CCeEEEEECCCcEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEECCC
Confidence 689999999887642 345554433 23458999999999999999999998887766 56664433
No 255
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.15 E-value=3e-09 Score=63.42 Aligned_cols=88 Identities=15% Similarity=0.186 Sum_probs=58.6
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc----ceeEEEEE------------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG----RAKKYMEL------------------------------ 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~----~~~~~~~v------------------------------ 62 (115)
.|+.+... .....|.|.+++.+|+|.|.|.+.+... .....+.|
T Consensus 68 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~g~~v~L~C~~ 147 (221)
T 3m8o_H 68 GRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLV 147 (221)
T ss_dssp TSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSCCCTTEEEEEEEE
T ss_pred ccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCcccccCCCEEEEEEE
Confidence 55554432 3456899999999999999999976421 00011211
Q ss_pred ec-ccC-C-cEEEEEeCC--------------------eEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 63 SV-SVS-D-RRLMETRGN--------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 63 ~g-~~~-~-~~~~~~~~~--------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
.| .|. + .+.|..++. ...|.|......|.|.|+|.+.+..+...
T Consensus 148 ~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 148 QGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp EEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSCCE
T ss_pred EeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCCce
Confidence 33 454 3 677765431 12488899889999999999999886643
No 256
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=1.6e-10 Score=61.01 Aligned_cols=55 Identities=20% Similarity=0.500 Sum_probs=43.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
|.|+|+|++..+.. ..++.+. ...|.|.++..+|+|.|.|.+.+..+.....+.|
T Consensus 32 p~i~W~k~g~~~~~--~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 86 (99)
T 2cr3_A 32 QSINWLRDGVQLAE--SNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSV 86 (99)
T ss_dssp CEEEEEESSSBCCC--CSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CeEEEEECCEECCC--CCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEE
Confidence 68999999988866 5555442 5689999999999999999999988777664433
No 257
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.15 E-value=7.3e-10 Score=66.97 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=25.5
Q ss_pred CCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 19 DRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 19 ~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
.++.+.. ......|.|.+++.+|+|.|.|.+.+
T Consensus 64 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 97 (245)
T 4ei6_B 64 DQFSVERPDGSYFTLKIQPTALEDSAVYFCASSF 97 (245)
T ss_dssp TTEEEECCTTSCEEEEECSCCGGGCEEEEEEEEC
T ss_pred CCEEEEeccCceEEEEECCCCHhHCEEEEEEEcc
Confidence 5555442 23456899999999999999999984
No 258
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.15 E-value=1.2e-10 Score=62.19 Aligned_cols=61 Identities=25% Similarity=0.452 Sum_probs=42.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEeccc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSV 66 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~ 66 (115)
|.|.|+|++..+.. ..++.. ......|.|.++..+|+|.|.|.+.|..+.... .+.|.+.|
T Consensus 40 p~i~W~~~~~~~~~--~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 40 PQIMWFKDNETLVE--DSGIVL--KDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp CCEEEEESSSBCCC--BTTEEE--ETTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEEEC--
T ss_pred CeEEEEECCeEccc--CCCeEE--eCCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEEeCCC
Confidence 68999999988766 444433 345578999999999999999999998877766 55555543
No 259
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.14 E-value=7.8e-11 Score=63.18 Aligned_cols=64 Identities=28% Similarity=0.431 Sum_probs=48.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecccC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSVS 67 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~ 67 (115)
|.|.|+|++..+.. ........ ......|.|.++..+|+|.|.|.+.|..+.... .|.|.+.|.
T Consensus 39 p~v~W~~~g~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 39 PDLSWQLDGKPVRP--DSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp CEEECBBSSSBCCC--CSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEECCCC
T ss_pred CEEEEEECCEECCC--CCceEEEEecCCeEEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEeCCCC
Confidence 68999999988776 44433322 233568999999999999999999998887766 666655443
No 260
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.14 E-value=6.4e-10 Score=59.60 Aligned_cols=38 Identities=21% Similarity=0.234 Sum_probs=34.9
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
...|.|.++..+|+|.|+|.+.|..|..+..+.|.|.+
T Consensus 71 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~ 108 (108)
T 3cx2_A 71 LFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVHE 108 (108)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred eEEEEEecCCCccCEEEEEEEecCCCceEEEEEEEEeC
Confidence 35799999999999999999999999999999998864
No 261
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.14 E-value=3.3e-10 Score=60.32 Aligned_cols=54 Identities=17% Similarity=0.236 Sum_probs=45.1
Q ss_pred EEecccCCcEEEEEeCC--------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 61 ELSVSVSDRRLMETRGN--------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 61 ~v~g~~~~~~~~~~~~~--------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.+.|.|.|.+.|.+++. ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 24 ~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V~ 97 (103)
T 1wwb_X 24 TVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFM 97 (103)
T ss_dssp EEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECCS
T ss_pred EEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEC
Confidence 34788888888877541 1239999999999999999999999999999888875
No 262
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.13 E-value=5.6e-10 Score=63.47 Aligned_cols=61 Identities=25% Similarity=0.365 Sum_probs=48.6
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEe-CCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEe
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETR-GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELS 63 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~ 63 (115)
.|.|.|+|++..+.. ..++.+... .....|.|.++...|+|.|.|.+.|..+.... .|.|.
T Consensus 70 ~p~v~W~k~g~~~~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 133 (154)
T 1fhg_A 70 DPEVMWFKDDNPVKE--SRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVE 133 (154)
T ss_dssp CCEEEEEETTEECCC--SSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEEECCEECCC--CCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEEe
Confidence 368999999999877 666665433 33578999999999999999999999888766 45554
No 263
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.13 E-value=1.5e-10 Score=68.89 Aligned_cols=58 Identities=22% Similarity=0.402 Sum_probs=45.6
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
.|.|+|+|++.++.. ..++. .......|.|.++..+|+|.|+|.+.|..|.......+
T Consensus 146 ~p~i~W~k~g~~l~~--~~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L 203 (207)
T 3rbs_A 146 ETHIVWYKDEREISV--DEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 203 (207)
T ss_dssp TCEEEEEETTEEECC--CCCCC--CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEECCEECCC--CCceE--cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEE
Confidence 378999999999976 44432 12234579999999999999999999999988875554
No 264
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.12 E-value=6.9e-10 Score=66.10 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=26.1
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
.++.+... .....|.|.+++.+|+|.|.|.+.+.
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 100 (215)
T 1c5d_H 65 SRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDG 100 (215)
T ss_dssp GGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCS
T ss_pred CcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecC
Confidence 45554432 23568999999999999999999875
No 265
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.11 E-value=1.1e-09 Score=57.55 Aligned_cols=63 Identities=16% Similarity=0.039 Sum_probs=48.2
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeC----------------CeEEEEEeccCCCCCeeeEEEeecCc
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRG----------------NKHTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~----------------~~~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
..+.-...|.+ .|.|.+.+.|.+++ ....|.|.++..+|+|.|+|.|.|..
T Consensus 19 ~G~~v~l~C~~-------------~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~ 85 (99)
T 1g1c_A 19 QGSDAHFRVRV-------------VGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIA 85 (99)
T ss_dssp TTSCEEEEEEE-------------EEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCcEEEEEEE-------------EEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEECC
Confidence 34445667766 45566666665533 34479999999999999999999999
Q ss_pred cceeeEEEEEEe
Q psy3272 103 GRAKKYMELSEL 114 (115)
Q Consensus 103 ~~~~~~~~l~v~ 114 (115)
|.....+.|.|.
T Consensus 86 g~~~~~~~l~V~ 97 (99)
T 1g1c_A 86 GETSSHAFLLVQ 97 (99)
T ss_dssp EEEEEEEEEEEE
T ss_pred CcEEEEEEEEEe
Confidence 998888888875
No 266
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.11 E-value=1.2e-09 Score=65.73 Aligned_cols=95 Identities=12% Similarity=0.163 Sum_probs=61.7
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCC--------cce--eEEEEE------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNL--------GRA--KKYMEL------------------------ 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~--------~~~--~~~~~v------------------------ 62 (115)
.|+.+... .....|.|.+++.+|+|.|.|.+.+.. ... ...+.|
T Consensus 70 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~ 149 (232)
T 3qhz_H 70 TRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGT 149 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CE
T ss_pred CceEEEeccCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCc
Confidence 45554432 356689999999999999999998541 000 002222
Q ss_pred -------ecccCC--cEEEEEeCC-------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 -------SVSVSD--RRLMETRGN-------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 -------~g~~~~--~~~~~~~~~-------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.+++ .+.|..++. ...|.|......| |.|+|.+.|..+.......|.+.
T Consensus 150 v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 150 AALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp EEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCCC
Confidence 232332 345654331 1357788888888 99999999999887777666553
No 267
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.11 E-value=5e-10 Score=61.84 Aligned_cols=54 Identities=17% Similarity=0.210 Sum_probs=45.7
Q ss_pred EEecccCCcEEEEEeCC----------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 61 ELSVSVSDRRLMETRGN----------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 61 ~v~g~~~~~~~~~~~~~----------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.+.|.|.|.+.|++++. ..+|.|.++...|+|.|+|.|.|..|.....+.|.|+
T Consensus 23 ~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l~v~ 98 (126)
T 1he7_A 23 SVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 98 (126)
T ss_dssp EECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred EEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEEEEEEE
Confidence 34889999999987651 2479999999999999999999999999888888764
No 268
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=3.9e-10 Score=61.11 Aligned_cols=63 Identities=16% Similarity=0.265 Sum_probs=45.1
Q ss_pred CcceEEEECCEEeCCCCCC----------CEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEeccc
Q psy3272 1 MGMMSWYQDTFLIEPSVSD----------RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSVSV 66 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g~~ 66 (115)
.|.+.|+|||.+|.. .+ ++.+......+.|+|.++..+|+|.|+|..-+. ....+.|.|.+.|
T Consensus 35 ~p~v~W~knG~~l~~--~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~G~Y~~~~~~~-~~ssA~L~V~~~p 107 (112)
T 2e6q_A 35 IIQGTWFLNGEELKS--NEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPG-VQDSAALTIQESS 107 (112)
T ss_dssp CCCCEEEESSCBCCS--SCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTCSEEEEEEETT-EEEEEEEEEECSS
T ss_pred CCeEEEEECCEECcc--CcccccccccccEEEEEeCCcEEEEEECCCCHHHCccEEEEEECC-eeEEEEEEEeCCC
Confidence 378999999999987 55 666655556789999999999999997743321 1223366665443
No 269
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.11 E-value=2.9e-09 Score=64.35 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=25.9
Q ss_pred CCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 19 DRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 19 ~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
.++.+.. ......|.|.+++.+|+|.|.|.+.+
T Consensus 62 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 95 (245)
T 3nfj_J 62 QNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSV 95 (245)
T ss_dssp CSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CcEEEEecCCCEEEEEECCCChhhCEEEEEEEee
Confidence 4444332 34567899999999999999999987
No 270
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.11 E-value=1.4e-09 Score=58.68 Aligned_cols=62 Identities=16% Similarity=0.136 Sum_probs=48.4
Q ss_pred CCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeC---------------CeEEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 40 TDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRG---------------NKHTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 40 ~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~---------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.+.-...|.+ .|.|.+.+.|.+++ ....|.|.++..+|.|.|+|.|.|..|.
T Consensus 22 G~~v~l~C~~-------------~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~ 88 (114)
T 2cqv_A 22 GESVELFGKV-------------TGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGS 88 (114)
T ss_dssp TCCEEEEEEE-------------ESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCE
T ss_pred CCeEEEEEEE-------------EcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCc
Confidence 4445666766 45666666666544 2457999999999999999999999999
Q ss_pred eeeEEEEEEe
Q psy3272 105 AKKYMELSEL 114 (115)
Q Consensus 105 ~~~~~~l~v~ 114 (115)
....+.|.|.
T Consensus 89 ~~~~~~l~V~ 98 (114)
T 2cqv_A 89 RQAQVNLTVV 98 (114)
T ss_dssp EECCEEEEEE
T ss_pred EEEEEEEEEE
Confidence 8888888875
No 271
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.11 E-value=9.8e-10 Score=68.01 Aligned_cols=34 Identities=15% Similarity=0.332 Sum_probs=25.9
Q ss_pred CCEEEEE--eCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 19 DRRLMET--RGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 19 ~~~~~~~--~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
.++.+.. ......|.|.+++.+|+|.|.|.+.+.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 101 (280)
T 3fku_X 66 GRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPS 101 (280)
T ss_dssp TTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSS
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecC
Confidence 3454432 234568999999999999999999875
No 272
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=3.6e-10 Score=61.76 Aligned_cols=58 Identities=14% Similarity=0.169 Sum_probs=39.7
Q ss_pred CcceEEEECCE-EeCCCCCCCEEEEEe-C-----CeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTF-LIEPSVSDRRLMETR-G-----NKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~-~~~~~~~~~~~~~~~-~-----~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|||+.. .+......++.+... . ....|+|.++...|+|.|.|++.+..+....
T Consensus 44 ~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~ 108 (118)
T 2edn_A 44 KPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSC 108 (118)
T ss_dssp CCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTTCSCEEEEEECSSCEEEE
T ss_pred CCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhhCEEEEEEEEEcCCcEEE
Confidence 37999999742 222111233343211 1 1578999999999999999999998887655
No 273
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.10 E-value=1.1e-09 Score=57.53 Aligned_cols=62 Identities=27% Similarity=0.345 Sum_probs=48.1
Q ss_pred CCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeC----------------CeEEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 40 TDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRG----------------NKHTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 40 ~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~----------------~~~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
.+.-...|.+ .|.|.+.+.|.+++ ....|.|.++..+|.|.|+|.|.|..|
T Consensus 20 G~~~~l~C~~-------------~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (100)
T 2kdg_A 20 GRFCRMDFKV-------------SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAG 86 (100)
T ss_dssp TCCEEEEEEC-------------EEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEEEEEE-------------EeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEcCCC
Confidence 4455667776 45566666666543 224899999999999999999999999
Q ss_pred ceeeEEEEEEe
Q psy3272 104 RAKKYMELSEL 114 (115)
Q Consensus 104 ~~~~~~~l~v~ 114 (115)
..+..+.|.|.
T Consensus 87 ~~~~~~~l~V~ 97 (100)
T 2kdg_A 87 EATFTVQLDVL 97 (100)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEEEEEE
Confidence 98888888886
No 274
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=1.6e-09 Score=58.88 Aligned_cols=53 Identities=9% Similarity=0.137 Sum_probs=44.2
Q ss_pred ecccCCcEEEEEeC--------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 SVSVSDRRLMETRG--------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ~g~~~~~~~~~~~~--------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.|.+.|.+++ ....|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 49 ~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 115 (118)
T 2e7c_A 49 QGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVE 115 (118)
T ss_dssp EEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEEC
T ss_pred ccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 67777777777654 234699999999999999999999999988888888863
No 275
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.10 E-value=1.3e-09 Score=57.19 Aligned_cols=64 Identities=17% Similarity=0.026 Sum_probs=49.0
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeC----------------CeEEEEEeccCCCCCeeeEEEeecCc
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRG----------------NKHTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~----------------~~~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
..+.-...|.+ .|.|.|.+.|.+++ ....|.|.++..+|.|.|+|.|.|..
T Consensus 19 ~G~~v~l~C~~-------------~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~ 85 (99)
T 1u2h_A 19 EGQDVIMSIRV-------------QGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEY 85 (99)
T ss_dssp TTCCEEEEEEE-------------EEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEEEEEE-------------EEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEECC
Confidence 34445667766 55666667776643 22369999999999999999999999
Q ss_pred cceeeEEEEEEeC
Q psy3272 103 GRAKKYMELSELE 115 (115)
Q Consensus 103 ~~~~~~~~l~v~~ 115 (115)
|.....+.|.|.+
T Consensus 86 g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 86 GARQCEARLEVRG 98 (99)
T ss_dssp EEEEEEEEEEEEC
T ss_pred CceeEEEEEEEEC
Confidence 9998888888863
No 276
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.10 E-value=1.8e-10 Score=61.60 Aligned_cols=59 Identities=19% Similarity=0.450 Sum_probs=45.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEec
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSV 64 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g 64 (115)
|.|.|+|++..+.. ..++.+........|.|.+++.+|+|.|.|.+.+. .....+.|..
T Consensus 36 p~v~W~k~~~~~~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~--~~~~~l~V~~ 94 (108)
T 2dm7_A 36 APVEWKKGPETLRD--GGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQE--RTSATLTVRA 94 (108)
T ss_dssp CCCEEESSSSBCCS--SSSCEEEEETTEEEEEESSCCTTTCSEEEEEETTE--EEEEECEEEC
T ss_pred CeeEEEECCEECCC--CCCEEEEecCCEEEEEECCCCcccCEEEEEEEcCC--EEEEEEEEec
Confidence 68999999988876 67777666667788999999999999999999542 2222455544
No 277
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.09 E-value=3.8e-10 Score=58.60 Aligned_cols=46 Identities=15% Similarity=0.362 Sum_probs=38.4
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK 57 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 57 (115)
.|.+.|+|++..+.. . ....|.|.++..+|+|.|.|.+.+..+...
T Consensus 32 ~p~i~W~~~~~~~~~--~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 77 (91)
T 3bfo_A 32 IPHYQWFKNELPLTH--E---------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQD 77 (91)
T ss_dssp CCEEEEEETTEECTT--C---------CSSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCEEEEEcCCeeCCc--C---------CCCeEEECCCCHHhCEEEEEEEEcCCCCEE
Confidence 368999999998876 2 235799999999999999999999887654
No 278
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.08 E-value=8.5e-10 Score=68.64 Aligned_cols=25 Identities=16% Similarity=0.324 Sum_probs=22.3
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
....|+|.+++.+|+|.|.|.+.+.
T Consensus 99 ~~~sL~I~~v~~~DsG~Y~C~~~~~ 123 (291)
T 2gki_A 99 STAYMELSSLTSEDSAVYYCARGAY 123 (291)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEECG
T ss_pred CEEEEEECcCCHHHCEEEEEEEecc
Confidence 4578999999999999999999765
No 279
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.08 E-value=1.3e-10 Score=61.22 Aligned_cols=56 Identities=27% Similarity=0.523 Sum_probs=41.8
Q ss_pred CcceEEEECCEEeCCCCCCCEE-EEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRL-METRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|.|+|++..+.. ..++. .........|.|.++..+|+|.|.|.+.|..+....
T Consensus 37 ~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~ 93 (100)
T 3caf_A 37 MPTMRWLKNGKEFKQ--EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINH 93 (100)
T ss_dssp CCEEEEEETTEECCG--GGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCEEEEEECCEEccc--ccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEE
Confidence 368999999998865 22210 112234458999999999999999999998887665
No 280
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.08 E-value=3.1e-09 Score=70.04 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=53.5
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCCcc--------eeEEEEE------------------------------ecc-cC-
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNLGR--------AKKYMEL------------------------------SVS-VS- 67 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~--------~~~~~~v------------------------------~g~-~~- 67 (115)
....|.|.+++.+|+|.|.|.+.+..+. ....|.| .|. |.
T Consensus 78 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~ 157 (475)
T 1iga_A 78 TTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQE 157 (475)
T ss_pred CeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEEEEEEEeeecCCC
Confidence 4568999999999999999999875431 0112222 333 44
Q ss_pred C-cEEEEEeCC--------------------eEEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 68 D-RRLMETRGN--------------------KHTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 68 ~-~~~~~~~~~--------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
+ .+.|..++. ...|.|..+...|.|.|+|.|.|..+.
T Consensus 158 p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 215 (475)
T 1iga_A 158 PLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP 215 (475)
T ss_pred ceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCC
Confidence 4 777865431 013677777778999999999999864
No 281
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=1e-09 Score=57.70 Aligned_cols=63 Identities=21% Similarity=0.264 Sum_probs=49.7
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeCC------------eEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRGN------------KHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
..+.-...|.+ .|.|.|.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|...
T Consensus 25 ~G~~v~l~C~~-------------~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~ 91 (99)
T 2yr3_A 25 EGQDFVLQCSV-------------RGTPVPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVS 91 (99)
T ss_dssp TTCCEEEECEE-------------EEESCCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEECSSCEEE
T ss_pred CCCeEEEEEEE-------------eeeCCCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEEECCCeEE
Confidence 34445666665 567778888877642 35799999999999999999999999988
Q ss_pred eEEEEEEe
Q psy3272 107 KYMELSEL 114 (115)
Q Consensus 107 ~~~~l~v~ 114 (115)
..+.|.|.
T Consensus 92 ~~~~l~V~ 99 (99)
T 2yr3_A 92 CSAWVTVH 99 (99)
T ss_dssp EECCEEEC
T ss_pred EEEEEEEC
Confidence 88877763
No 282
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=5.6e-10 Score=58.84 Aligned_cols=53 Identities=30% Similarity=0.580 Sum_probs=41.0
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|+|++..+... ..++.. .....|.|.++..+|+|.|.|.+.|..+....
T Consensus 38 p~v~W~~~~~~~~~~-~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 90 (100)
T 2edj_A 38 PVISWLKEGFTFPGR-DPRATI---QEQGTLQIKNLRISDTGTYTCVATSSSGETSW 90 (100)
T ss_dssp CEEEEEESSSEESSS-CSSCEE---CTTCCEEEESCCTTTCCEEEEEEECSSCCCBC
T ss_pred CEEEEEECCEECCCC-CCCEEE---cCCCEEEEccCCcccCEEEEEEEEcCCCCEEE
Confidence 689999999888741 333332 23457999999999999999999998776655
No 283
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.08 E-value=1.9e-09 Score=56.99 Aligned_cols=63 Identities=21% Similarity=0.230 Sum_probs=48.7
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeC---------------CeEEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRG---------------NKHTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~---------------~~~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
..+.-...|.+ .|.|.|.+.|.+++ ....|.|.++..+|.|.|+|.|.|..|
T Consensus 22 ~G~~v~l~C~~-------------~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G 88 (103)
T 3qp3_A 22 CGQNTRFILNV-------------QSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKG 88 (103)
T ss_dssp TTCCEEEEEEE-------------EEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CCCeEEEEEEE-------------EecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCC
Confidence 34445666766 55666666666543 345799999999999999999999999
Q ss_pred ceeeEEEEEEe
Q psy3272 104 RAKKYMELSEL 114 (115)
Q Consensus 104 ~~~~~~~l~v~ 114 (115)
.....+.|.|.
T Consensus 89 ~~~~~~~l~V~ 99 (103)
T 3qp3_A 89 EASDYATLDVT 99 (103)
T ss_dssp EEEEEEEEEEE
T ss_pred cEEEEEEEEEE
Confidence 99888888875
No 284
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.07 E-value=6.1e-10 Score=61.51 Aligned_cols=64 Identities=11% Similarity=0.225 Sum_probs=43.2
Q ss_pred CcceEEEECCE-EeCCCCCCCEEEEE--eC----CeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEec
Q psy3272 1 MGMMSWYQDTF-LIEPSVSDRRLMET--RG----NKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSV 64 (115)
Q Consensus 1 ~p~v~W~~~~~-~~~~~~~~~~~~~~--~~----~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g 64 (115)
.|.|.|||+.. .+......++.+.. .. ....|+|.+++.+|+|.|.|++.+..+.... .|.|..
T Consensus 39 ~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 39 KPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 37999999742 11100023444321 11 1578999999999999999999998877766 677755
No 285
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.07 E-value=1.7e-09 Score=63.79 Aligned_cols=57 Identities=23% Similarity=0.385 Sum_probs=47.6
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEe-CCeEEEEEecCCCCCCeEEEEEeecCCcceeEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETR-GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY 59 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 59 (115)
.|.|.|++++.++.. ..++..... .....|.|.++..+|.|.|.|.+.|..+.....
T Consensus 146 ~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~ 203 (212)
T 2r15_A 146 PPEVSWLKNEKALAQ--TDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSD 203 (212)
T ss_dssp CCEEEEEETTEEECC--CSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CceEEEEECCeECcc--CCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEE
Confidence 368999999999987 677665544 556799999999999999999999998877663
No 286
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.07 E-value=6.5e-09 Score=62.93 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=27.1
Q ss_pred CCCEEEEEeC--CeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 18 SDRRLMETRG--NKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 18 ~~~~~~~~~~--~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
..|+.+.... ....|+|.+++.+|+|.|.|.+.+.
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 102 (242)
T 1hxm_B 66 SGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEA 102 (242)
T ss_dssp TTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEE
T ss_pred CCeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecC
Confidence 4566554332 4678999999999999999999764
No 287
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.07 E-value=1.4e-09 Score=63.29 Aligned_cols=57 Identities=28% Similarity=0.378 Sum_probs=48.1
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY 59 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 59 (115)
.|.+.|++++..+.. ..++..........|.|.++..+|.|.|.|.+.|..+.....
T Consensus 132 ~~~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 188 (194)
T 2a38_A 132 TPVVKFYRDGAEIQS--SLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATST 188 (194)
T ss_dssp CCEEEEEETTEECCC--SSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEE
T ss_pred CCeEEEEECCEECCC--CCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEE
Confidence 368999999999887 677776666667789999999999999999999988877663
No 288
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.06 E-value=3.4e-09 Score=55.49 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=34.6
Q ss_pred CCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 76 GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 76 ~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
+....|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 55 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 55 DGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVK 93 (97)
T ss_dssp TTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEET
T ss_pred CCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEEE
Confidence 344589999999999999999999999998888888875
No 289
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.05 E-value=1.3e-09 Score=66.93 Aligned_cols=24 Identities=21% Similarity=0.373 Sum_probs=21.7
Q ss_pred CeEEEEEecCCCCCCeEEEEEeec
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
....|.|.+++.+|+|.|.|.+.+
T Consensus 99 ~~~sL~I~~v~~~D~G~Y~C~~~~ 122 (270)
T 3qib_D 99 SPCSLEIQSSEAGDSALYLCASSL 122 (270)
T ss_dssp SCEEEEESSCCGGGCEEEEEEEES
T ss_pred cEEEEEECCCCHhHCeEEEEEEec
Confidence 467899999999999999999985
No 290
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.03 E-value=1e-08 Score=61.66 Aligned_cols=93 Identities=12% Similarity=0.132 Sum_probs=61.0
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecCCc------ce----eEEEEE------------------------
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNNLG------RA----KKYMEL------------------------ 62 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~~~------~~----~~~~~v------------------------ 62 (115)
.|+.+... .....|+|.+++.+|+|.|.|.+.+..+ .. ...+.|
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~ 145 (230)
T 3n9g_H 66 GRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGT 145 (230)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCE
T ss_pred CcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCC
Confidence 45555433 2456799999999999999999976420 00 012332
Q ss_pred -------ec-cc-CCcEEEEEeCC---------------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEE
Q psy3272 63 -------SV-SV-SDRRLMETRGN---------------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 63 -------~g-~~-~~~~~~~~~~~---------------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~ 112 (115)
.| .| ...+.| ++. ...|.|......| |.|+|.+.+..+.......+.
T Consensus 146 v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 222 (230)
T 3n9g_H 146 AALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 222 (230)
T ss_dssp EEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECC
T ss_pred EEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEcc
Confidence 22 33 223555 221 1268888888889 999999999988776666665
Q ss_pred Ee
Q psy3272 113 EL 114 (115)
Q Consensus 113 v~ 114 (115)
|.
T Consensus 223 v~ 224 (230)
T 3n9g_H 223 PK 224 (230)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 291
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=1.1e-09 Score=59.40 Aligned_cols=61 Identities=25% Similarity=0.413 Sum_probs=45.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEeccc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSV 66 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~ 66 (115)
|.|.|+|++..+... ..++.... ...|.|.++..+|+|.|.|.+.|..+.... .|.|...+
T Consensus 38 p~i~W~k~g~~~~~~-~~~~~~~~---~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 38 PTILWRKDGVLVSTQ-DSRIKQLE---NGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp CEEEEEESSSBCCTT-STTEEEEE---TTEEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEECCS
T ss_pred CEEEEEECCEECcCC-CCeEEEcc---CCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEEeCC
Confidence 689999999887641 34444322 347999999999999999999998887765 56665443
No 292
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.02 E-value=3e-09 Score=55.78 Aligned_cols=37 Identities=27% Similarity=0.309 Sum_probs=33.9
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 62 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 62 LTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEeecCcccCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 4679999999999999999999999998888888875
No 293
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.02 E-value=1.4e-09 Score=63.45 Aligned_cols=57 Identities=23% Similarity=0.333 Sum_probs=47.8
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEec-CCCCCCeEEEEEeecCCcceeEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKN-VQSTDFGNYSCVADNNLGRAKKY 59 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~y~C~~~~~~~~~~~~ 59 (115)
.|.|.|++++..+.. ..++..........|.|.+ +..+|.|.|.|.+.|..+.....
T Consensus 133 ~p~i~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~ 190 (197)
T 2j8h_A 133 DPVITWQKGQDLIDN--NGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT 190 (197)
T ss_dssp CCEEEEEESSCEECS--SSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEE
T ss_pred CCcEEEEECCEEeec--CCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEE
Confidence 368999999999886 6676665556678999999 99999999999999988877663
No 294
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.02 E-value=2.6e-09 Score=57.19 Aligned_cols=57 Identities=14% Similarity=0.264 Sum_probs=39.9
Q ss_pred cceEEEECCEEe-CCCCCCCEEEEE--e----CCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLI-EPSVSDRRLMET--R----GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~-~~~~~~~~~~~~--~----~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|+|||++... ......++.... . .....|.|.+++.+|+|.|.|.+.|..+....
T Consensus 37 p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 100 (108)
T 3cx2_A 37 PVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCS 100 (108)
T ss_dssp CEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred cEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCccCEEEEEEEecCCCceEE
Confidence 789999987322 111123443321 1 12568999999999999999999999888776
No 295
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.02 E-value=3.1e-09 Score=56.50 Aligned_cols=53 Identities=28% Similarity=0.327 Sum_probs=42.8
Q ss_pred ecccCCcEEEEEeC---------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 SVSVSDRRLMETRG---------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ~g~~~~~~~~~~~~---------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.+.+.|.+++ ....|.|.++..+|.|.|+|.+.|..|.....+.|.|.+
T Consensus 38 ~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 38 LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEEEc
Confidence 55666667776643 233799999999999999999999999988888888763
No 296
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.01 E-value=1.8e-09 Score=57.15 Aligned_cols=45 Identities=24% Similarity=0.583 Sum_probs=38.5
Q ss_pred eEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEee
Q psy3272 4 MSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVAD 50 (115)
Q Consensus 4 v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~ 50 (115)
|.|+|++..+.. ..++.+........|.|.+++.+|+|.|.|.+.
T Consensus 39 v~W~k~~~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g 83 (103)
T 2e7b_A 39 VKWCYGNNVLRP--GDKYSLRQEGAMLELVVRNLRPQDSGRYSCSFG 83 (103)
T ss_dssp CEEEESSSBCCC--SSSEEEEECSSEEEEEECSCCTTTCCCEEEECS
T ss_pred eEEEECCEECCC--CCcEEEEEcCCEEEEEEccCCcccCEEEEEEEC
Confidence 999999998876 677777666667789999999999999999943
No 297
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.01 E-value=4.4e-09 Score=58.05 Aligned_cols=37 Identities=16% Similarity=0.180 Sum_probs=33.8
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.++..+|+|.|+|.+.|..+..+..+.|.|.
T Consensus 74 ~~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~ 110 (126)
T 2dav_A 74 TFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVH 110 (126)
T ss_dssp EEEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEEE
T ss_pred eEEEEEccCCcccCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 3679999999999999999999999999888888885
No 298
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.01 E-value=2.5e-09 Score=72.42 Aligned_cols=58 Identities=26% Similarity=0.430 Sum_probs=52.9
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYM 60 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~ 60 (115)
.|.|+|+|++.++.. ..++.+........|.|.++..+|+|.|+|.+.|..|.....+
T Consensus 511 ~P~v~W~k~~~el~~--s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v 568 (573)
T 3uto_A 511 PPVVTWHKDDRELKQ--SVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIV 568 (573)
T ss_dssp CCEEEEEETTEECCS--SSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCeEEEEECCEEccc--CCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEE
Confidence 489999999999988 8888888888899999999999999999999999999988843
No 299
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.00 E-value=6e-09 Score=54.56 Aligned_cols=38 Identities=24% Similarity=0.408 Sum_probs=33.9
Q ss_pred CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 77 NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 77 ~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
....|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 60 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 60 GGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp TEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEE
Confidence 34479999999999999999999999998888888875
No 300
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.00 E-value=5.1e-09 Score=57.03 Aligned_cols=36 Identities=33% Similarity=0.413 Sum_probs=33.1
Q ss_pred EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 79 HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 79 ~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
..|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 74 ~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V~ 109 (122)
T 3s35_X 74 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 109 (122)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEccCCCceEEEEEEEEe
Confidence 479999999999999999999999998888888875
No 301
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.99 E-value=1.3e-09 Score=59.24 Aligned_cols=52 Identities=21% Similarity=0.218 Sum_probs=43.1
Q ss_pred ecccCCcEEEEEeC-------------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRG-------------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~-------------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|.+++ ....|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 30 ~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 30 RGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp ECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCS
T ss_pred eeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEEEEc
Confidence 67778888887654 13479999999999999999999999999888887654
No 302
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.99 E-value=7.2e-10 Score=66.84 Aligned_cols=49 Identities=10% Similarity=0.204 Sum_probs=33.5
Q ss_pred ceEEEECCEEe-CCCCCCCEEEEEeC----CeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 3 MMSWYQDTFLI-EPSVSDRRLMETRG----NKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 3 ~v~W~~~~~~~-~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
.|+|+++|..+ .. .......... ....|.|.++..+|.|.|.|.+.+..
T Consensus 47 ~v~W~~~g~~~~~~--~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~ 100 (231)
T 2w59_A 47 SVTWTREKSGNLRP--DPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEE 100 (231)
T ss_dssp EEEEECSSSSCCCC--CCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTT
T ss_pred EEEEEcCCeecccc--ccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCC
Confidence 89999998876 32 2221111011 23579999999999999999998754
No 303
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=2.1e-09 Score=56.55 Aligned_cols=53 Identities=28% Similarity=0.309 Sum_probs=43.6
Q ss_pred ecccCCcEEEEEeCC-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 SVSVSDRRLMETRGN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..|.....+.|.|.+
T Consensus 33 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 33 TGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98 (100)
T ss_dssp ECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEEES
T ss_pred EEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEEec
Confidence 567777777776542 23699999999999999999999999988888888864
No 304
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.98 E-value=1.4e-08 Score=62.74 Aligned_cols=90 Identities=17% Similarity=0.231 Sum_probs=65.2
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE----E--------EEE--------
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK----Y--------MEL-------- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~----~--------~~v-------- 62 (115)
++.|+|||.++.. ....|.|..+...|+|.|.|.+.+..+.... . +.+
T Consensus 37 TYqWyKDG~~IsG------------aT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~v 104 (304)
T 3shs_A 37 TYTWTKDDQPHEN------------NTATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYV 104 (304)
T ss_dssp EEEEEETTEECSC------------CSSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEECBCCEEEEESSCSEEEE
T ss_pred eEEEEECCccccC------------CcceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEeccCceeEEecCCCceec
Confidence 6899999988775 2457888899999999999999875543321 0 011
Q ss_pred --------------e-ccc-----CCcEEEEEeCCe----EEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 63 --------------S-VSV-----SDRRLMETRGNK----HTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 63 --------------~-g~~-----~~~~~~~~~~~~----~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
. |.+ ...+.|.+++.. ..+++......++|.|+|.+.|..+.
T Consensus 105 ssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq~lT~sS~TateaG~YtV~VTn~~~~ 170 (304)
T 3shs_A 105 SSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQDITIQEFTADKNGVYTVKVWGESED 170 (304)
T ss_dssp CSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSSEEEECSCCGGGCEEEEEEEESSSGG
T ss_pred cCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCccccceeeEEecCCeEEEEEEEcCCCC
Confidence 1 223 358888887632 35677777888999999999999773
No 305
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.98 E-value=3.4e-09 Score=55.74 Aligned_cols=52 Identities=23% Similarity=0.388 Sum_probs=42.9
Q ss_pred ecccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 33 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~Vv 100 (100)
T 3caf_A 33 GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV 100 (100)
T ss_dssp EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEEEEEEC
Confidence 567777778876541 1279999999999999999999999998888888773
No 306
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.97 E-value=7.4e-09 Score=54.29 Aligned_cols=65 Identities=26% Similarity=0.315 Sum_probs=50.0
Q ss_pred CCCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeCC----------eEEEEEeccCCCCCeeeEEEeecCccceee
Q psy3272 38 QSTDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRGN----------KHTLTIKNVQSTDFGNYSCVADNNLGRAKK 107 (115)
Q Consensus 38 ~~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~----------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~ 107 (115)
...+.-...|.+. .|.|.+.+.|.+++. ...|.|.++..+|+|.|+|.+.|..|....
T Consensus 23 ~~G~~v~l~C~~~------------~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (98)
T 1gl4_B 23 RPGADVTFICTAK------------SKSPAYTLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQG 90 (98)
T ss_dssp CTTCCEEEEEEEE------------ESSSCCEEEEEEGGGBCCCTTEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred ecCCCEEEEEeCC------------CCCCCcEEEEEeCCCCCCCceeecCCCEEEEeCCChhhCEEEEEEecCCCCcccc
Confidence 4455567778763 246677777776421 237999999999999999999999999888
Q ss_pred EEEEEEe
Q psy3272 108 YMELSEL 114 (115)
Q Consensus 108 ~~~l~v~ 114 (115)
.+.|.|.
T Consensus 91 ~~~l~V~ 97 (98)
T 1gl4_B 91 TATLHVQ 97 (98)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 8888774
No 307
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.97 E-value=2.7e-09 Score=56.83 Aligned_cols=53 Identities=23% Similarity=0.440 Sum_probs=38.7
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEe-C-------CeEEEEEecCCCCCCeEEEEEeecCCcce
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETR-G-------NKHTLTIKNVQSTDFGNYSCVADNNLGRA 56 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~-~-------~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 56 (115)
|.+.|+|++..+.. ......... . ....|.|.++..+|+|.|.|.+.+..+..
T Consensus 42 ~~i~W~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~ 102 (112)
T 3so5_A 42 MTFAWXXDNEALQD--AEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSS 102 (112)
T ss_dssp CEEEEEETTEECTT--CEEEEEEETTGGGSSCEEEEEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred EEEEEccCCccccc--ccccceeeeeccCCCccccceEEEEeccccccCCeEEEEEEeCCCcE
Confidence 68999999988765 221111110 0 14789999999999999999999988763
No 308
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=9.5e-10 Score=57.62 Aligned_cols=42 Identities=24% Similarity=0.471 Sum_probs=35.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
|.|.|+|++..+.. . ....|.|.++..+|+|.|.|.+.+..+
T Consensus 40 ~~v~W~k~~~~~~~--~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 81 (96)
T 2ens_A 40 PQIHWMKDGVPLPL--P---------PSPVLILPEIGPQDQGTYSCVATHSSH 81 (96)
T ss_dssp CCCCCEESSSBCSS--C---------CCSEEEEESCCTTTCEEEECEECCSSC
T ss_pred CEEEEEECCEECcC--C---------CCCEEEECCCCcccCEEEEEEEEeCCC
Confidence 68999999987765 2 356899999999999999999998543
No 309
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.97 E-value=1.1e-08 Score=70.79 Aligned_cols=112 Identities=17% Similarity=0.143 Sum_probs=69.0
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEe---CCeEEEEEecCCCCCCeEEEEEeecCCc----c-----------------e
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETR---GNKHTLTIKNVQSTDFGNYSCVADNNLG----R-----------------A 56 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~y~C~~~~~~~----~-----------------~ 56 (115)
.|.|.|.|+|..+.. -....+... .....+.+..+...+.|.|.|....... . .
T Consensus 105 ~p~i~W~k~g~~~~~--~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~~~~~~~v~~G~~v 182 (731)
T 2v5y_A 105 LGNPIWNISGDPTRT--WNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFA 182 (731)
T ss_dssp CCSEEEEECCCCCSS--CEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEECCCCCEEEETTSCE
T ss_pred ccceeEEEeCCcCCc--eeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccccccceEEeCCCcE
Confidence 378999999976543 121112221 2334466666666667766665321000 0 0
Q ss_pred eEEEEEecccCCcEE-EEE--eCC---------------eEEEEEeccCCCCCeeeEEEeecCccc-eeeEEEEEEe
Q psy3272 57 KKYMELSVSVSDRRL-MET--RGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGR-AKKYMELSEL 114 (115)
Q Consensus 57 ~~~~~v~g~~~~~~~-~~~--~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~-~~~~~~l~v~ 114 (115)
.....+.|.|.|.+. |.+ ++. ...|.|.++...|.|.|+|.|.|..|. .+..+.|.|.
T Consensus 183 ~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~ 259 (731)
T 2v5y_A 183 TFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK 259 (731)
T ss_dssp EEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEe
Confidence 002223788888877 652 221 247999999999999999999999997 6666666664
No 310
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.97 E-value=3.7e-09 Score=54.80 Aligned_cols=63 Identities=19% Similarity=0.092 Sum_probs=49.0
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeCC------eEEEEEeccCCCCCeeeEEEeecCcccee-eEEEE
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRGN------KHTLTIKNVQSTDFGNYSCVADNNLGRAK-KYMEL 111 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~-~~~~l 111 (115)
..+.-...|.+ .|.|.|.+.|.+++. ...|.|.++..+|+|.|+|.+.|..|... ..+.|
T Consensus 17 ~G~~~~l~C~~-------------~g~p~p~i~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l 83 (91)
T 3bfo_A 17 PGSTLVLQCVA-------------VGSPIPHYQWFKNELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEI 83 (91)
T ss_dssp TTSCEEEECEE-------------ECSSCCEEEEEETTEECTTCCSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEE
T ss_pred CCCcEEEEEEe-------------ccCCCCEEEEEcCCeeCCcCCCCeEEECCCCHHhCEEEEEEEEcCCCCEEeeeEEE
Confidence 44555667765 678888899988653 34799999999999999999999999744 45667
Q ss_pred EEe
Q psy3272 112 SEL 114 (115)
Q Consensus 112 ~v~ 114 (115)
.|.
T Consensus 84 ~V~ 86 (91)
T 3bfo_A 84 IID 86 (91)
T ss_dssp EEC
T ss_pred EEe
Confidence 664
No 311
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.96 E-value=4.1e-09 Score=69.46 Aligned_cols=32 Identities=13% Similarity=0.040 Sum_probs=26.3
Q ss_pred EEEEeccCCCCCeeeEEEeecCccceeeEEEE
Q psy3272 80 TLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 111 (115)
Q Consensus 80 ~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l 111 (115)
.|.|.++..+|.|.|+|.|.|..+.......|
T Consensus 310 ~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v 341 (475)
T 1iga_A 310 VLPGCAEPWNHGKTFTCTAAYPESKTPLTATL 341 (475)
T ss_pred EEEEchHHhccCCcEEEEEEcCCCCCceEEEe
Confidence 58999999999999999999999875443333
No 312
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.96 E-value=2e-08 Score=61.97 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=26.2
Q ss_pred CCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 19 DRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 19 ~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
.|+.+.. ......|.|.+++.+|+|.|.|.+.+
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~ 121 (279)
T 2wbj_D 88 DKFLINHASLTLSTLTVTSAHPEDSSFYICSARD 121 (279)
T ss_dssp SSEEEEECSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CcEEEEeCCCCEEEEEEccCCccCCEEEEEEEcc
Confidence 4555443 23567899999999999999999987
No 313
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.96 E-value=4.3e-09 Score=61.22 Aligned_cols=57 Identities=26% Similarity=0.458 Sum_probs=47.7
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCC-CCCeEEEEEeecCCcceeEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQS-TDFGNYSCVADNNLGRAKKY 59 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~y~C~~~~~~~~~~~~ 59 (115)
.|.+.|++++..+.. ..++..........|.|.++.. +|.|.|.|.+.|..+.....
T Consensus 132 ~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~ 189 (197)
T 3lcy_A 132 VPAMTWFHGQKLLQN--SENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAI 189 (197)
T ss_dssp CCEEEEEETTEECCC--CSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEE
T ss_pred CCeeEEeECCEECCC--CCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEE
Confidence 368999999999987 7777766666668999999985 89999999999998877663
No 314
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.96 E-value=5.5e-09 Score=61.85 Aligned_cols=58 Identities=24% Similarity=0.432 Sum_probs=43.9
Q ss_pred CcceEEEECCEEeCCC-CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPS-VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|.|++++..+... ...++..........|.|.++..+|.|.|.|.+.|..|...+
T Consensus 137 ~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s 195 (212)
T 2yd6_A 137 DPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYS 195 (212)
T ss_dssp CCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCcccc
Confidence 3689999999988752 124444444456789999999999999999999999887765
No 315
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=5.9e-10 Score=60.39 Aligned_cols=60 Identities=18% Similarity=0.354 Sum_probs=41.7
Q ss_pred cceEEEECCEEeCCCCCCCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEEecc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSVS 65 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v~g~ 65 (115)
|.|+|+|++..+.. ..++.+.. ......|.|.++..+|+|.|.|.+.+ ......|.|.+.
T Consensus 43 p~v~W~k~g~~l~~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~g~--~~~~~~L~V~~~ 103 (115)
T 2cr6_A 43 EPVHWFLDKTPLHA--NELNEIDAQPGGYHVLTLRQLALKDSGTIYFEAGD--QRASAALRVTEK 103 (115)
T ss_dssp CSCEEEESSCEECC--SSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEETT--EECCEEEEEECC
T ss_pred CccEEEECCEECCC--CCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEECC--eeEEEEEEEECC
Confidence 68999999998876 55544331 24456899999999999999999532 122225666543
No 316
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=98.95 E-value=3.4e-08 Score=60.29 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=27.0
Q ss_pred EEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 80 TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 80 ~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.|.|......| |.|+|.+.+..+.......+.+
T Consensus 217 ~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~ 249 (256)
T 3sob_H 217 VVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 249 (256)
T ss_dssp EEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEECHHHcCC-ceEEEEEEeCCCCcceEEEecc
Confidence 68888888889 9999999999987666655554
No 317
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.94 E-value=1.5e-08 Score=61.27 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=27.5
Q ss_pred EEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 80 TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 80 ~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|......| |.|+|.+.|..+.......|.+.
T Consensus 203 ~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 236 (239)
T 3tv3_H 203 VVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 236 (239)
T ss_dssp EEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEEEchhhcCC-CEEEEEEEECCCCceEEEEeccc
Confidence 57788888888 99999999999887766666553
No 318
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.94 E-value=5.8e-09 Score=63.32 Aligned_cols=51 Identities=12% Similarity=0.193 Sum_probs=33.4
Q ss_pred ceEEEECCEEeCCCCCCCEEEEE----eCCeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMET----RGNKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~----~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
.|+|+|++..+... ........ ......|.|.++..+|.|.|.|.+.+..+
T Consensus 52 ~v~W~k~~~~~~~~-~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~ 106 (239)
T 1i1c_A 52 RFSWFIDDVEVHTA-QTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAF 106 (239)
T ss_dssp EEEEEESSCEECCC-EECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSS
T ss_pred EEEEEECCccccCc-ccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccC
Confidence 79999998765421 00000000 01235799999999999999999987655
No 319
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=2.6e-09 Score=58.36 Aligned_cols=38 Identities=16% Similarity=0.028 Sum_probs=34.8
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
...|.|.++..+|+|.|+|.+.|..|..+..+.|.|.+
T Consensus 79 ~~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 79 TVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp EEEEEESSCCTTTCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred eEEEEEeeCChhhCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 46799999999999999999999999999999998863
No 320
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.93 E-value=1.7e-09 Score=57.82 Aligned_cols=38 Identities=37% Similarity=0.517 Sum_probs=34.6
Q ss_pred CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 77 NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 77 ~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
....|.|.++..+|.|.|+|.+.|..|..+..+.|.|.
T Consensus 68 ~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 68 YKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp SEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEEC
T ss_pred CEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 35689999999999999999999999998889888875
No 321
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.93 E-value=6.9e-09 Score=56.27 Aligned_cols=35 Identities=34% Similarity=0.361 Sum_probs=32.8
Q ss_pred EEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 80 TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 80 ~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 74 ~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 108 (116)
T 2kkq_A 74 TLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVT 108 (116)
T ss_dssp EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEECCCCcccCEEEEEEEEcCCCeEEEEEEEEEe
Confidence 79999999999999999999999998888888875
No 322
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.92 E-value=6.1e-09 Score=55.45 Aligned_cols=52 Identities=27% Similarity=0.241 Sum_probs=36.4
Q ss_pred ecccCCcEEEEEeCC-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRGN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 35 ~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 99 (108)
T 3kvq_A 35 SGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIE 99 (108)
T ss_dssp C----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEEE
T ss_pred cCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEEe
Confidence 556677777776542 2479999999999999999999999998888888875
No 323
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=5.1e-09 Score=56.05 Aligned_cols=36 Identities=28% Similarity=0.240 Sum_probs=32.5
Q ss_pred EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 79 HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 79 ~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
..|.|.++..+|.|.|+|.+.|..|.....+.|.|.
T Consensus 66 ~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 101 (110)
T 2dm2_A 66 CSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQ 101 (110)
T ss_dssp EEEEESSCCTTTCSCCEEEEECTTCCEEECCCEEEE
T ss_pred EEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEEE
Confidence 479999999999999999999999998887777775
No 324
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.91 E-value=6.1e-09 Score=60.25 Aligned_cols=53 Identities=32% Similarity=0.698 Sum_probs=43.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.+.|++++..+.. ..++.. ......|.|.++..+|.|.|.|.+.+..+....
T Consensus 128 ~~v~W~~~g~~~~~--~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 180 (189)
T 2v5t_A 128 PAISWFRNGKLIEE--NEKYIL--KGSNTELTVRNIINSDGGPYVCRATNKAGEDEK 180 (189)
T ss_dssp CEEEEEETTEECCC--SSSEEE--ETTTTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CeEEEEECCEECcC--CCcEEE--ecCCCEEEEcCCChhhCeeEEEEEEeCCCceeE
Confidence 68999999998876 555443 244568999999999999999999998877766
No 325
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.91 E-value=1.5e-08 Score=57.45 Aligned_cols=53 Identities=26% Similarity=0.247 Sum_probs=44.3
Q ss_pred EecccCCcEEEEEeC----------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 62 LSVSVSDRRLMETRG----------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 62 v~g~~~~~~~~~~~~----------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
+.|.|.+.+.|.+++ ....|.|.++...|.|.|+|.|.|..|.....+.|.|.
T Consensus 65 ~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 133 (154)
T 1fhg_A 65 VEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVE 133 (154)
T ss_dssp EEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEEEEECCCeEEEEEEEEEe
Confidence 367788888887754 13479999999999999999999999998888888775
No 326
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.91 E-value=2.5e-08 Score=57.93 Aligned_cols=58 Identities=31% Similarity=0.449 Sum_probs=45.2
Q ss_pred CcceEEEE--CCEEeCCC-CCCCEEEEEeCCeEEEEEecCC-CCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQ--DTFLIEPS-VSDRRLMETRGNKHTLTIKNVQ-STDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~--~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~-~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.+.|++ ++..+... ...++..........|.|.++. .+|.|.|.|.+.|..+....
T Consensus 121 ~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~ 182 (190)
T 2wv3_A 121 HPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASV 182 (190)
T ss_dssp CCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEE
T ss_pred CCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCccee
Confidence 36899999 78776521 1556666555566789999999 69999999999999887766
No 327
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.89 E-value=3.5e-09 Score=55.56 Aligned_cols=50 Identities=28% Similarity=0.389 Sum_probs=37.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|+|++..... .. .. .....|.|.+++.+|+|.|.|.+.|..+....
T Consensus 41 ~~v~W~k~~~~~~~--~~-~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (98)
T 1gl4_B 41 YTLVWTRLHNGKLP--SR-AM----DFNGILTIRNVQPSDAGTYVCTGSNMFAMDQG 90 (98)
T ss_dssp CEEEEEEGGGBCCC--TT-EE----EETTEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred cEEEEEeCCCCCCC--ce-ee----cCCCEEEEeCCChhhCEEEEEEecCCCCcccc
Confidence 68999997544332 21 11 12347999999999999999999998877665
No 328
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.89 E-value=6.7e-09 Score=61.44 Aligned_cols=100 Identities=18% Similarity=0.181 Sum_probs=55.1
Q ss_pred ceEEEECCEEeCCCCCCC-EEEEEeCC----eEEEEEecCCCCCCeEEEEEeecCCcce--eEEE------------EE-
Q psy3272 3 MMSWYQDTFLIEPSVSDR-RLMETRGN----KHTLTIKNVQSTDFGNYSCVADNNLGRA--KKYM------------EL- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~-~~~~~~~~----~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~~~------------~v- 62 (115)
.|.|+|++.++.. ... ........ ...|.|......|.|.|.|.+.+..+.. ...+ .+
T Consensus 38 ~v~W~k~~~~~~~--~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~ 115 (207)
T 1l6x_A 38 KFNWYVDGVEVHN--AKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTL 115 (207)
T ss_dssp EEEEEETTEEECC--CEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEE
T ss_pred EEEEEECCccccC--cccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEE
Confidence 8999999987754 210 00000011 1123333333345999999999865542 1122 11
Q ss_pred ------------------ec-ccC-CcEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCc
Q psy3272 63 ------------------SV-SVS-DRRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 63 ------------------~g-~~~-~~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
.| .|. +.+.|.+++.. ..|.|......|.|.|+|.|.|..
T Consensus 116 ~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~ 195 (207)
T 1l6x_A 116 PPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 195 (207)
T ss_dssp CCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred CCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCC
Confidence 34 343 37888776521 023333333456899999999987
Q ss_pred cc
Q psy3272 103 GR 104 (115)
Q Consensus 103 ~~ 104 (115)
..
T Consensus 196 l~ 197 (207)
T 1l6x_A 196 LH 197 (207)
T ss_dssp SG
T ss_pred cC
Confidence 54
No 329
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.89 E-value=2.6e-08 Score=57.57 Aligned_cols=57 Identities=19% Similarity=0.417 Sum_probs=44.2
Q ss_pred cceEEEE---CCE-EeCCCCCCCEEEEEeCCeEEEEEecCC-CCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQ---DTF-LIEPSVSDRRLMETRGNKHTLTIKNVQ-STDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~---~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~-~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|++ ++. .+......++.+........|.|.+++ .+|.|.|.|.+.|..+....
T Consensus 114 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~ 175 (184)
T 3b5h_A 114 TDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQA 175 (184)
T ss_dssp CEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEE
T ss_pred CeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceE
Confidence 7899999 444 343312356666666677899999999 89999999999999887766
No 330
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.89 E-value=8.2e-09 Score=61.29 Aligned_cols=35 Identities=31% Similarity=0.380 Sum_probs=27.1
Q ss_pred CCCEEEEEe---CCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 18 SDRRLMETR---GNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 18 ~~~~~~~~~---~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
..|+.+... .....|.|.+++.+|+|.|.|.+.+.
T Consensus 56 ~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 93 (207)
T 1ypz_E 56 NGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTW 93 (207)
T ss_dssp ETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECB
T ss_pred CCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 355555433 45678999999999999999999765
No 331
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.89 E-value=6e-09 Score=61.24 Aligned_cols=57 Identities=19% Similarity=0.443 Sum_probs=46.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE-EEEE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK-YMEL 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~-~~~v 62 (115)
|.+.|++++..+.. ..++... .....|.|.++..+|.|.|.|.+.|..+...+ .+.+
T Consensus 139 p~i~W~~~g~~l~~--~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l 196 (208)
T 3r4d_A 139 ANIQWLFNSQSLQL--TERMTLS--QNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKL 196 (208)
T ss_dssp CEEEEEETTEECCC--CSSEEEE--TTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEE
T ss_pred CceEEEECCEeCCC--CCCeEEc--CCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceee
Confidence 68999999999876 5655432 34478999999999999999999999888776 4444
No 332
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.87 E-value=8.4e-09 Score=53.87 Aligned_cols=61 Identities=18% Similarity=0.322 Sum_probs=45.7
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeCC-----------eEEEEEeccCCCCCeeeEEEeecCccceee
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRGN-----------KHTLTIKNVQSTDFGNYSCVADNNLGRAKK 107 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~-----------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~ 107 (115)
..+.-...|.+ .|.| +.+.|.+++. ...|.|.++..+|+|.|+|.|.|..|..+.
T Consensus 23 ~G~~v~l~C~~-------------~g~p-p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~ 88 (95)
T 2ckn_A 23 PGDLLQLRCRL-------------RDDV-QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTT 88 (95)
T ss_dssp TTSCEEEECCE-------------ESSC-CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEEEE
T ss_pred CCCeEEEEEEC-------------CCCC-CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcEEE
Confidence 44555667766 4444 4566655431 347999999999999999999999999888
Q ss_pred EEEEEE
Q psy3272 108 YMELSE 113 (115)
Q Consensus 108 ~~~l~v 113 (115)
.+.|.|
T Consensus 89 ~~~l~V 94 (95)
T 2ckn_A 89 YFSVNV 94 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888876
No 333
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=1.2e-08 Score=53.66 Aligned_cols=36 Identities=19% Similarity=0.466 Sum_probs=32.6
Q ss_pred EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 79 HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 79 ~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
..|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 54 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 89 (99)
T 2cr3_A 54 EEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVS 89 (99)
T ss_dssp SEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBC
T ss_pred CEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEe
Confidence 379999999999999999999999998888888775
No 334
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=98.87 E-value=4.6e-08 Score=59.62 Aligned_cols=34 Identities=18% Similarity=0.319 Sum_probs=26.2
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 18 SDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 18 ~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
..|+.+... .....|+|.+++.+|+|.|.|.+.+
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~ 99 (248)
T 3u2s_H 64 WGRLSISRDNSKDTLYLQMNSLRVEDTATYFCVREA 99 (248)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeC
Confidence 355555432 3567899999999999999999975
No 335
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.87 E-value=1.8e-09 Score=63.00 Aligned_cols=47 Identities=21% Similarity=0.446 Sum_probs=38.6
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA 56 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 56 (115)
.|.|+|+|+|.++.. .. .....|.|.++..+|+|.|+|.+.|..+..
T Consensus 133 ~p~i~W~k~g~~i~~--~~-------~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 133 DKTIKWLKDGSIISP--LN-------ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSCEEEEETTEECCC--SS-------CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCeEEEEECCEECcc--cC-------CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 378999999998874 22 145678999999999999999999877654
No 336
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=2.5e-09 Score=57.18 Aligned_cols=36 Identities=39% Similarity=0.602 Sum_probs=33.0
Q ss_pred EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 79 HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 79 ~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
..|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 66 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 101 (110)
T 2dm3_A 66 HSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVA 101 (110)
T ss_dssp EEEEESSCCGGGCSBBCEEEECSSCEEEECCEEEEE
T ss_pred EEEEEeeCCcccCEEEEEEEECCCCEEEEEEEEEEe
Confidence 479999999999999999999999998888888875
No 337
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.86 E-value=2.6e-08 Score=60.58 Aligned_cols=21 Identities=10% Similarity=0.241 Sum_probs=19.3
Q ss_pred EEEecCCCCCCeEEEEEeecC
Q psy3272 32 LTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 32 l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.+++.+|+|.|.|.+.+.
T Consensus 76 L~I~~v~~~DsG~Y~C~~~~~ 96 (253)
T 3to4_D 76 LRLQVANMSQGRTLYCTSSAD 96 (253)
T ss_dssp CEEEEESCSSCEEEEEEEECS
T ss_pred EEEccCChhhCeEEEEEEecC
Confidence 999999999999999999743
No 338
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.85 E-value=2.5e-08 Score=52.89 Aligned_cols=56 Identities=13% Similarity=0.236 Sum_probs=38.9
Q ss_pred cceEEEECCE-EeCCC-----CCCCEEEEE-eCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTF-LIEPS-----VSDRRLMET-RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~-~~~~~-----~~~~~~~~~-~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|.|++++. .+... ...++.+.. ......|.|.+++.+|+|.|.|.+.+ .+....
T Consensus 36 ~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~ 98 (108)
T 3m45_A 36 TSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTS 98 (108)
T ss_dssp CCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEE
T ss_pred cEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEE
Confidence 6899999775 22210 133555432 23577899999999999999999998 555444
No 339
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.85 E-value=9.5e-10 Score=56.27 Aligned_cols=39 Identities=15% Similarity=0.411 Sum_probs=32.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecC-CCCCCeEEEEEeec
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNV-QSTDFGNYSCVADN 51 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~y~C~~~~ 51 (115)
|.|+|+|+|.+++. . .+..|.|.++ ..+|+|.|.|.+..
T Consensus 27 P~i~W~kdg~~l~~--~---------~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 27 ENLKWEKNGQELPQ--K---------HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp SSCEEEETTEECTT--C---------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CcEEEEECCEECcC--C---------CCCEEEECccCccCcCEEEEEEEcc
Confidence 56999999999876 2 3457999996 78999999999975
No 340
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.85 E-value=5.1e-08 Score=58.79 Aligned_cols=26 Identities=12% Similarity=0.318 Sum_probs=23.0
Q ss_pred CCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 27 GNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 27 ~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
.....|.|.+++.+|+|.|.|.+.+.
T Consensus 69 ~~~~~L~I~~v~~~D~G~Y~C~~~~~ 94 (238)
T 1bec_A 69 QEQFSLILELATPSQTSVYFCASGGG 94 (238)
T ss_dssp SSEEEEEESSCCGGGCEEEEEEEESC
T ss_pred CCEEEEEEecCCcccCEEEEEEEecC
Confidence 34578999999999999999999875
No 341
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.84 E-value=2e-08 Score=63.76 Aligned_cols=60 Identities=17% Similarity=0.259 Sum_probs=45.9
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEe-------CCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETR-------GNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~-------~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
.|.|+|+++|..+.. ......... .....|.|.+++.+|+|.|+|.+.|..|.....+.+
T Consensus 275 ~p~i~W~~~g~~l~~--~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l 341 (347)
T 2ifg_A 275 APSLRWLFNGSVLNE--TSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 341 (347)
T ss_dssp CCEEEEEETTEECCC--CSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEeCCEECCC--CcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEE
Confidence 478999999998875 444333221 136779999999999999999999999887775443
No 342
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.84 E-value=1.4e-09 Score=59.39 Aligned_cols=60 Identities=28% Similarity=0.465 Sum_probs=44.7
Q ss_pred cc-eEEEECCEEeCCCCCCCEEEE--EeCC--eEEEEEecCCCCCC-eEEEEEeecCCcceeEEEE
Q psy3272 2 GM-MSWYQDTFLIEPSVSDRRLME--TRGN--KHTLTIKNVQSTDF-GNYSCVADNNLGRAKKYME 61 (115)
Q Consensus 2 p~-v~W~~~~~~~~~~~~~~~~~~--~~~~--~~~l~i~~~~~~d~-G~y~C~~~~~~~~~~~~~~ 61 (115)
|. |+|++++..+......++.+. .... ...|.|.++..+|. |.|.|.+.|..|.....+.
T Consensus 43 p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~~ 108 (122)
T 2cry_A 43 PDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIR 108 (122)
T ss_dssp CSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHHHHSCEEEEEECSSCEEEEEEC
T ss_pred CcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhhCCceEEEEEECCCCeEEEEEE
Confidence 45 999999988874213555542 2233 56899999999999 9999999999988776443
No 343
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.83 E-value=3.6e-08 Score=52.25 Aligned_cols=37 Identities=19% Similarity=0.348 Sum_probs=32.9
Q ss_pred CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 77 NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 77 ~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
....|.|.++..+|+|.|+|.+.| .+..+..+.|.|.
T Consensus 69 ~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~~~~L~V~ 105 (108)
T 3m45_A 69 HELSISVSDVSLSDEGQYTCSLFT-MPVKTSKAYLTVL 105 (108)
T ss_dssp SEEEEEECSCCGGGCEEEEEEECS-SSCEEEEEEEEEE
T ss_pred CcEEEEECCCChhHCeEEEEEEEc-CCCcEEEEEEEEE
Confidence 467899999999999999999999 8888888888875
No 344
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.83 E-value=2.2e-08 Score=54.84 Aligned_cols=68 Identities=15% Similarity=0.233 Sum_probs=43.7
Q ss_pred cceEEEECCEEeCC------CCCCCEEEE-EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecccCCcE
Q psy3272 2 GMMSWYQDTFLIEP------SVSDRRLME-TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSVSDRR 70 (115)
Q Consensus 2 p~v~W~~~~~~~~~------~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~~~~ 70 (115)
|.|.|++++..+.. ....++.+. .......|.|.+++.+|+|.|.|.+.+. +.... .|.|.+.|....
T Consensus 31 ~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~~~l~V~~~P~~~~ 107 (124)
T 3rbg_A 31 SSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIVLATMKGEF 107 (124)
T ss_dssp CEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SEEEEEEEEEEECC-----
T ss_pred CEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CCCcEEEEEEEEeCCCCCc
Confidence 68999986653210 014454443 2345689999999999999999999988 55555 566666554443
No 345
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=98.83 E-value=6.8e-08 Score=57.93 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=25.8
Q ss_pred EEEEeccCCCCCeeeEEEeecCccceeeEEEEE
Q psy3272 80 TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELS 112 (115)
Q Consensus 80 ~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~ 112 (115)
.|.|......| |.|+|.+.|..+.......|.
T Consensus 192 ~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 223 (226)
T 3mlr_H 192 VVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 223 (226)
T ss_dssp EEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EEEECHhHcCC-CeEEEEEEECCCCcCeEEEcc
Confidence 68888888888 999999999988766555443
No 346
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=9e-09 Score=55.79 Aligned_cols=52 Identities=23% Similarity=0.277 Sum_probs=40.6
Q ss_pred ecccCCcEEEEEeCC-------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRGN-------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~-------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 33 ~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (118)
T 2eo9_A 33 TGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQ 97 (118)
T ss_dssp CCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEE
T ss_pred EecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEE
Confidence 455566666665432 1269999999999999999999999998887777775
No 347
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.82 E-value=1.7e-08 Score=66.18 Aligned_cols=99 Identities=16% Similarity=0.194 Sum_probs=56.1
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEe---cCCCCC---CeEEEEEeecCCcceeE--EE------------EE
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIK---NVQSTD---FGNYSCVADNNLGRAKK--YM------------EL 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~---~~~~~d---~G~y~C~~~~~~~~~~~--~~------------~v 62 (115)
.|+|+|++.++.. ..... ........+.+. .+...| .|.|.|.+.+....... .+ .+
T Consensus 284 ~i~W~k~~~~~~~--~~~~~-~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~ 360 (457)
T 1hzh_H 284 KFNWYVDGVEVHN--AKTKP-REEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYT 360 (457)
T ss_dssp EEEEEETTEEECC--CEEEE-EEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEE
T ss_pred EEEEEeCCccccc--ccccc-ceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEE
Confidence 8999999988754 21111 111111222222 133445 99999999965332211 11 11
Q ss_pred -------------------ecccCC--cEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecC
Q psy3272 63 -------------------SVSVSD--RRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNN 101 (115)
Q Consensus 63 -------------------~g~~~~--~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~ 101 (115)
.|.+++ .+.|.+++.. ..|.|.....+|.|.|+|.|.|.
T Consensus 361 ~~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~ 440 (457)
T 1hzh_H 361 LPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHE 440 (457)
T ss_dssp ECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECT
T ss_pred ECCCccccCCCcEEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEEC
Confidence 444443 7888876521 12444444456789999999998
Q ss_pred ccc
Q psy3272 102 LGR 104 (115)
Q Consensus 102 ~~~ 104 (115)
...
T Consensus 441 ~l~ 443 (457)
T 1hzh_H 441 ALH 443 (457)
T ss_dssp TSG
T ss_pred CCC
Confidence 755
No 348
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.81 E-value=1e-10 Score=76.16 Aligned_cols=102 Identities=12% Similarity=0.135 Sum_probs=63.7
Q ss_pred ceEEEECCEEeCCCCCCCEEEE---EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--E------------EEE---
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLME---TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--Y------------MEL--- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~---~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~------------~~v--- 62 (115)
.|+|+|++..+........... .......|.|.++..+|.|.|.|.+.+..+.... . +.+
T Consensus 265 ~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~ 344 (434)
T 1igy_B 265 QFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPP 344 (434)
T ss_dssp CBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECC
T ss_pred EEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECC
Confidence 7999999977643100000000 0012356899999999999999999876553211 1 111
Q ss_pred ----------------ecccCC--cEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 63 ----------------SVSVSD--RRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 63 ----------------~g~~~~--~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.|.+++ .+.|.+++.. ..|.|.....+|.|.|+|.|.|....
T Consensus 345 ~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 345 PKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 424 (434)
T ss_dssp CSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTSG
T ss_pred CHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCCC
Confidence 454333 7888876521 14566666667899999999998755
No 349
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.81 E-value=1.4e-08 Score=55.21 Aligned_cols=64 Identities=20% Similarity=0.257 Sum_probs=41.8
Q ss_pred cceEEEECCEEeCC----CCCCCEEEE--EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecc
Q psy3272 2 GMMSWYQDTFLIEP----SVSDRRLME--TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVS 65 (115)
Q Consensus 2 p~v~W~~~~~~~~~----~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~ 65 (115)
|.|.|++++..+.. ......... .......|.|.+++.+|+|.|.|.+.+..+.... .|.|.+.
T Consensus 40 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V~~~ 111 (122)
T 3s35_X 40 IDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEK 111 (122)
T ss_dssp CEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE
T ss_pred EEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccCCCceEEEEEEEEecc
Confidence 47899998874321 001111110 0113568999999999999999999998887766 4555443
No 350
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.81 E-value=4e-08 Score=60.40 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=25.9
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
.|+.+... .....|+|.+++.+|+|.|.|.+.+.
T Consensus 65 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 100 (263)
T 3iu4_H 65 SRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSGV 100 (263)
T ss_dssp TCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEC
T ss_pred CCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 45554322 24567999999999999999999764
No 351
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.79 E-value=8.6e-08 Score=53.21 Aligned_cols=28 Identities=32% Similarity=0.593 Sum_probs=25.4
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccce
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRA 105 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~ 105 (115)
...|.|.++..+|.|.|+|.|.|..|..
T Consensus 89 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 89 ASTISIDTLVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECCTTSS
T ss_pred ceEEEECCCCcccCEEEEEEEEecCCcc
Confidence 3589999999999999999999998874
No 352
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.79 E-value=2e-08 Score=54.23 Aligned_cols=57 Identities=26% Similarity=0.348 Sum_probs=35.9
Q ss_pred CcceEEEECCEEeCCCCC-CCEEEEEeCCeEEEEE-----ecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVS-DRRLMETRGNKHTLTI-----KNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~-~~~~~~~~~~~~~l~i-----~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|+|++..+..... .+....... ...+.+ .+++.+|+|.|.|.+.|..|...+
T Consensus 38 ~p~v~W~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~v~~~D~G~Y~C~a~N~~G~~~s 100 (117)
T 2v9t_A 38 TPTIEWYKGGERVETDKDDPRSHRMLLP-SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVS 100 (117)
T ss_dssp CCEEEEEETTEECCCTTTCSSCSEEECT-TSCEEESSCCCBTTBCSSCEEEEEEEEETTEEEEC
T ss_pred CCeEEEEECCEeccccCCCCcceeEEec-CCcEEEEEEEeCCCCcCcCEEEEEEEEeCccceEe
Confidence 378999999998865211 111111111 122222 255789999999999999888765
No 353
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.79 E-value=1.7e-08 Score=58.16 Aligned_cols=55 Identities=16% Similarity=0.205 Sum_probs=40.9
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEEeccc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMELSVSV 66 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v~g~~ 66 (115)
|.+.|+++|..+.. .. ....|.|.++..+|+|.|.|.+.+..+...+ .|.|.+.|
T Consensus 116 ~~~~W~~~g~~~~~--~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 116 YKVIYYKDGEALKY--WY--------ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAP 173 (176)
T ss_dssp EEEEEEETTEECCS--CC--------CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred eEEEEEECCEEEee--ec--------CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCC
Confidence 58999999998865 21 3568999999999999999999986443332 45555444
No 354
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.78 E-value=9.1e-08 Score=57.53 Aligned_cols=25 Identities=24% Similarity=0.364 Sum_probs=22.3
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
....|.|.+++.+|+|.|.|.+.+.
T Consensus 77 ~~~~L~I~~v~~~D~G~Y~C~~~~~ 101 (230)
T 1ypz_F 77 STSILTIYSLEEEDEAIYYCSYGEG 101 (230)
T ss_dssp TEEEEEECSCCGGGCSEEEEEECCT
T ss_pred CEEEEEECcCChhhCEEEEEEEECC
Confidence 4568999999999999999999863
No 355
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.78 E-value=1.1e-08 Score=64.75 Aligned_cols=47 Identities=13% Similarity=0.163 Sum_probs=31.5
Q ss_pred cceEEEECCEEeCCC-------CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 2 GMMSWYQDTFLIEPS-------VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 2 p~v~W~~~~~~~~~~-------~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
|.|+|+|++..+... ....+. ....|.|..+..+| |.|.|.+.+..+
T Consensus 152 ~~v~W~k~g~~~~~~~~~~~~~~~~~~~-----~~s~L~i~~~~~~d-G~Y~C~a~n~~~ 205 (344)
T 1za6_B 152 VTVSWNSGALTSGVHTFPAVLQSSGLYS-----LSSVVTVPSSSLGT-QTYICNVNHKPS 205 (344)
T ss_dssp CCEEETTTTBCTTEEECCCEECTTSCEE-----EEEEEEEETTHHHH-BCEEEEEEEGGG
T ss_pred eEEEEecCCccCceeECCCeECCCCCEE-----EEEEEEEcHHHcCC-CcEEEEEEeCCC
Confidence 589999998753210 011121 13478898888777 999999987654
No 356
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.77 E-value=5.9e-08 Score=62.45 Aligned_cols=102 Identities=11% Similarity=0.108 Sum_probs=61.8
Q ss_pred ceEEEECCEEeCCCC---CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--E------------EEE---
Q psy3272 3 MMSWYQDTFLIEPSV---SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--Y------------MEL--- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~------------~~v--- 62 (115)
.|+|+|++..+.... ..+...........|.|..+..+|.|.|.|.+.+....... . +.+
T Consensus 203 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~ 282 (376)
T 2aty_A 203 QFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPP 282 (376)
T ss_pred EEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCC
Confidence 699999986653210 00000001113457999999999999999999876442111 1 111
Q ss_pred ----------------ecc-c-CCcEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 63 ----------------SVS-V-SDRRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 63 ----------------~g~-~-~~~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.|. | ...+.|.+++.. ..|.|......|.|.|+|.+.|....
T Consensus 283 ~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l~ 362 (376)
T 2aty_A 283 PKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 362 (376)
T ss_pred CHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCCC
Confidence 343 2 347788776521 13555555556789999999998754
No 357
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.76 E-value=1.5e-07 Score=54.45 Aligned_cols=59 Identities=24% Similarity=0.481 Sum_probs=44.4
Q ss_pred CcceEEEEC--CEEeCCC---CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE
Q psy3272 1 MGMMSWYQD--TFLIEPS---VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY 59 (115)
Q Consensus 1 ~p~v~W~~~--~~~~~~~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~ 59 (115)
.|.+.|+++ +..+... ...++..........|.|.++..+|.|.|.|.+.|..+.....
T Consensus 123 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 186 (192)
T 2va4_A 123 IPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKS 186 (192)
T ss_dssp CCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEE
Confidence 368999998 5555431 1234555555567899999999999999999999988877663
No 358
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.76 E-value=3.1e-08 Score=58.05 Aligned_cols=52 Identities=10% Similarity=0.050 Sum_probs=32.6
Q ss_pred CcceEEEECCEEeCCCCCCC-EE-EEEeCCeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 1 MGMMSWYQDTFLIEPSVSDR-RL-METRGNKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~-~~-~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
.|.++|+|+|..+.. ... +. .........|.|.+++.+|+|.|.|.+.+...
T Consensus 128 ~~~v~W~k~g~~~~~--~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 128 FDGFILCKEGEDEHP--QCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CSEEEEEEC--------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred CcEEEEEECCCccCC--ccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 378999999987643 211 00 11122358899999999999999999998754
No 359
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.75 E-value=8.1e-09 Score=59.81 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=41.9
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecccC
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSVS 67 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~ 67 (115)
.|.++|++++..+.. ....|.|.++..+|+|.|.|.+.+..+.... .+.|.+.|.
T Consensus 126 ~~~v~W~~~~~~~~~------------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 126 SPSVQCRSPRGKNIQ------------GGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp CCEEEEECTTSCEEE------------ESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred CCEEEEEeCCCcccc------------CceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 378999998754422 3567999999999999999999987776666 555566554
No 360
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.75 E-value=2.9e-08 Score=57.54 Aligned_cols=52 Identities=35% Similarity=0.541 Sum_probs=41.7
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.+.|++++..+.. ..++.. .....|.|.++..+|.|.|.|.+.|..+...+
T Consensus 130 ~~v~W~~~~~~~~~--~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s 181 (192)
T 2iep_A 130 PSVSWIKGDSALRE--NSRIAV---LESGSLRIHNVQKEDAGQYRCVAKNSLGTAYS 181 (192)
T ss_dssp CEEEEEETTEECCC--CSSEEE---CTTSCEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred ceEEEEeCCEEccC--CCcEEE---ecCCcEEEecCChhhCEEEEEEEEcCCCcEEE
Confidence 68999999998876 555433 23457999999999999999999998876643
No 361
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.75 E-value=5.2e-08 Score=50.71 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=32.8
Q ss_pred EEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 79 HTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 79 ~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
..|.|.++..+|+|.|+|.+.|..|.....+.|.|.
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 86 (95)
T 4hwu_A 51 EYLQIKGATPRDSGLYACTAARTVDSETWIFMVNVT 86 (95)
T ss_dssp TEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEe
Confidence 379999999999999999999999998888888875
No 362
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.74 E-value=6.7e-08 Score=57.12 Aligned_cols=55 Identities=29% Similarity=0.499 Sum_probs=41.3
Q ss_pred CcceEEEECCEEeCCC------CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPS------VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~------~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.+.|++++..+... ...++... ....|.|.++..+|.|.|.|.+.|..|....
T Consensus 138 ~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 198 (217)
T 2vr9_A 138 EPTLIWIKDGVPLDDLKAMSFGASSRVRIV---DGGNLLISNVEPIDEGNYKCIAQNLVGTRES 198 (217)
T ss_dssp CCEEEEEETTEEECCCCCC---CCCSEEEE---TTTEEEESSCCSTTCEEEEEEEEETTEEEEC
T ss_pred CCeEEEEECCcCCCcccccccccCCcEEec---CCCcEEEeeCCHHHCeEEEEEEEcccceecc
Confidence 3689999999988731 02222221 3347999999999999999999998887765
No 363
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.74 E-value=2.5e-07 Score=55.32 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=36.0
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|++.+..+ .+.. .......|.|.+++.+|+|.|.|.+.+..+....
T Consensus 39 ~i~W~~~~~~l-----~~~~--~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~ 87 (210)
T 1gsm_A 39 SVQWRGLDTSL-----GAVQ--SDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQH 87 (210)
T ss_dssp EEEEESSTTTT-----CCEE--EESSEEEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred ceEEeeccccc-----CcEE--ecCCccEEEECccCcccCceEEEEEEeCCCceEE
Confidence 89999854322 1111 2356788999999999999999999987766544
No 364
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.74 E-value=4.7e-08 Score=54.86 Aligned_cols=62 Identities=15% Similarity=0.251 Sum_probs=42.1
Q ss_pred cceEEEE---------CCEEeCCCCCCCEEEE-EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecccC
Q psy3272 2 GMMSWYQ---------DTFLIEPSVSDRRLME-TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSVS 67 (115)
Q Consensus 2 p~v~W~~---------~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~ 67 (115)
|.|.|++ ++..+ . ..++... .......|.|.+++.+|+|.|.|.+.+. +.... .|.|...|.
T Consensus 68 ~~i~W~~~~~~~i~~~~~~~~-~--~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~~~~L~V~~~P~ 141 (145)
T 1z9m_A 68 SSLQWSNPAQQTLYFGEKRAL-R--DNRIQLVTSTPHELSISISNVALADEGEYTCSIFTM-PVRTAKSLVTVLGIPQ 141 (145)
T ss_dssp CCEEEECTTCCEEEETTEECS-C--CTTEEEEEECSSEEEEEECSCCGGGCEEEEEEECSS-SCEEEEEEEEEECCCC
T ss_pred cEEEEECCCCcEEEECCceec-c--cCCEEEecCCCCeEEEEECCCChhhCEEEEEEEEcC-CCceEEEEEEEEeCCC
Confidence 6799994 33322 2 3455432 2344678999999999999999999988 55544 556655443
No 365
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.73 E-value=2.6e-08 Score=58.04 Aligned_cols=52 Identities=25% Similarity=0.354 Sum_probs=41.4
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|++++..+.. ..+ .......|.|.++..+|.|.|.|.+.|..+....
T Consensus 142 ~p~v~W~~~~~~~~~--~~~----~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~ 193 (201)
T 3s97_C 142 VPDIRWRKVLEPMPS--TAE----ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKH 193 (201)
T ss_dssp CCEEEEEETTBCCCT--TCE----EETTTTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CCceEEEeCCCcCCC--cee----ecCCCCEEEEccCChhhCEEEEEEEEecCCceee
Confidence 368999999987764 322 2234668999999999999999999998887766
No 366
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.72 E-value=1.2e-07 Score=57.63 Aligned_cols=25 Identities=20% Similarity=0.396 Sum_probs=22.0
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
....|.|.+++.+|+|.|.|.+.+.
T Consensus 74 ~~~~L~I~~v~~~D~G~Y~C~~~~~ 98 (252)
T 1oga_E 74 ESFPLTVTSAQKNPTAFYLCASSSR 98 (252)
T ss_dssp TBCCEEECSCCSCCCEEEEEEEESS
T ss_pred CEEEEEECcCChhhCEEEEEEEecC
Confidence 3568999999999999999999764
No 367
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.72 E-value=2.9e-08 Score=63.53 Aligned_cols=59 Identities=19% Similarity=0.117 Sum_probs=42.3
Q ss_pred CcceEEEECCEEeCCC--CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEe
Q psy3272 1 MGMMSWYQDTFLIEPS--VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELS 63 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~--~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~ 63 (115)
.|.|+|++++..+... ...++.+ ....|.|.+++.+|+|.|+|.+.+..+.... .+.|.
T Consensus 274 ~p~i~W~~~~~~~~~~~~~~~r~~~----~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 336 (361)
T 2xot_A 274 GMTKVWVSPSNEQVLSQGSNGSVSV----RNGDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVY 336 (361)
T ss_dssp TCEEEEECTTSCBCCSCCSSSSEEE----ETTEEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCeEEEEeCCCeeEeecccCCceEe----ecCeEEEeecCcccCEEEEEEEecCCCccEEEEEEEEE
Confidence 3789999977654321 1224444 2446999999999999999999998877766 44443
No 368
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.72 E-value=1.1e-07 Score=50.41 Aligned_cols=35 Identities=31% Similarity=0.523 Sum_probs=30.9
Q ss_pred EEEEEeccCCCCCeeeEEEeecCccc-eeeEEEEEE
Q psy3272 79 HTLTIKNVQSTDFGNYSCVADNNLGR-AKKYMELSE 113 (115)
Q Consensus 79 ~~l~i~~~~~~d~G~y~C~~~n~~~~-~~~~~~l~v 113 (115)
..|.|.++..+|.|.|+|.|.|..|. .+..+.|.|
T Consensus 76 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 76 TILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eEEEEeccccccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 58999999999999999999999998 456777766
No 369
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.71 E-value=3.3e-08 Score=57.29 Aligned_cols=53 Identities=21% Similarity=0.279 Sum_probs=38.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK 57 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 57 (115)
|.++|++++..+......++.. .....|.|.++..+|+|.|.|.+.+..+...
T Consensus 126 p~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~ 178 (189)
T 2v44_A 126 PAVSWLYHNEEVTTISDNRFAM---LANNNLQILNINKSDEGIYRCEGRVEARGEI 178 (189)
T ss_dssp CEEEEEEEC--CEECCCTTEEE---CTTSCEEETTCCGGGCEEEEEEEEETTTTEE
T ss_pred CcEEEEECCcEEeccCCCCEEE---ecCCcEEEEEcCcccCeEEEEEEEccccCce
Confidence 6899999998775322344433 2345899999999999999999998875544
No 370
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.69 E-value=7.4e-08 Score=56.90 Aligned_cols=57 Identities=25% Similarity=0.489 Sum_probs=43.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEEe
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMELS 63 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v~ 63 (115)
|.|.|++++..+... ..++... ...|.|.++..+|.|.|.|.+.|..|...+ .|.|.
T Consensus 140 p~i~W~~~~~~~~~~-~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 140 PNIYWIKNQTKVDMS-NPRYSLK----DGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp CEEEEEETTEECCTT-STTEEEE----TTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CeEEEEECCeEcccC-CCeEEcc----CCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEE
Confidence 689999999988751 2333322 348999999999999999999999887754 55554
No 371
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.69 E-value=1.4e-07 Score=51.62 Aligned_cols=39 Identities=26% Similarity=0.420 Sum_probs=33.9
Q ss_pred eCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 75 RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 75 ~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
......|.|.+++.+|+|.|+|.+.|. +.....+.|.|.
T Consensus 62 ~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~~~l~V~ 100 (124)
T 3rbg_A 62 SANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIVL 100 (124)
T ss_dssp ETTEEEEEESSCCGGGCEEEEEEEESS-SEEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHCEEEEEEEEcC-CCCcEEEEEEEE
Confidence 334678999999999999999999999 888888888875
No 372
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.68 E-value=2.4e-07 Score=54.85 Aligned_cols=52 Identities=25% Similarity=0.316 Sum_probs=42.0
Q ss_pred ecccCCcEEEEEeC-----------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRG-----------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~-----------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++ ....|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 43 ~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 111 (215)
T 3mtr_A 43 FAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQA 111 (215)
T ss_dssp EEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred eecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEEC
Confidence 56666666666543 34689999999999999999999999998888887764
No 373
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.68 E-value=5.3e-08 Score=57.92 Aligned_cols=52 Identities=13% Similarity=0.324 Sum_probs=41.0
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEEe
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMELS 63 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v~ 63 (115)
.|.+.|++++..+.. . ....|.|.++..+|.|.|.|.+.+..+...+ .|.|.
T Consensus 147 ~~~v~W~~~~~~~~~--~---------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 147 IPHYQWFKNELPLTH--E---------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp CCEEEEEETTEECTT--C---------CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred CCeEEEEECCEECCC--C---------CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 368999999998876 2 2457999999999999999999997766443 45553
No 374
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.68 E-value=2.9e-08 Score=58.31 Aligned_cols=54 Identities=24% Similarity=0.471 Sum_probs=39.7
Q ss_pred CcceEEEECCE-EeCCCCCCC-------EEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce
Q psy3272 1 MGMMSWYQDTF-LIEPSVSDR-------RLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA 56 (115)
Q Consensus 1 ~p~v~W~~~~~-~~~~~~~~~-------~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 56 (115)
.|.+.|++++. .+.. ... ...........|.|.++..+|.|.|.|.+.|..+..
T Consensus 134 ~~~i~W~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 134 PSEYSWFKDGISMLTA--DAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp CCEEEEEETTEESBC-------CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred CCEEEEEeCCcccccc--cccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc
Confidence 36899999998 7765 221 111223456789999999999999999999988777
No 375
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=2.9e-08 Score=51.85 Aligned_cols=52 Identities=21% Similarity=0.312 Sum_probs=40.3
Q ss_pred ecccCCcEEEEEeCC------eEEEEEeccCCCCCeeeEEEeecCccc--eeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRGN------KHTLTIKNVQSTDFGNYSCVADNNLGR--AKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~------~~~l~i~~~~~~d~G~y~C~~~n~~~~--~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..+. .+..+.|.|.
T Consensus 35 ~g~p~~~v~W~k~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~~~v~V~ 94 (96)
T 2ens_A 35 PAQPSPQIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVSISII 94 (96)
T ss_dssp SSCSSCCCCCEESSSBCSSCCCSEEEEESCCTTTCEEEECEECCSSCCCEECCCEEEEEC
T ss_pred ccCCCCEEEEEECCEECcCCCCCEEEECCCCcccCEEEEEEEEeCCCCcEEEEEEEEEEe
Confidence 566777888887653 458999999999999999999997554 4446666664
No 376
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.67 E-value=8.7e-08 Score=49.13 Aligned_cols=39 Identities=26% Similarity=0.484 Sum_probs=29.0
Q ss_pred EEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 72 METRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 72 ~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...++....|.|.++..+|+|.|+|.|.|. +..+.|.|.
T Consensus 44 ~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~a~l~V~ 82 (84)
T 2lu7_A 44 LEQAGARQVLRVQGARSGDAGEYLCDAPQD----SRIFLVSVE 82 (84)
T ss_dssp EEECSSCEEEEESSCSSTTCEEEEEECTTT----CEEEEEEEC
T ss_pred EeecCCeEEEEecCCCCcccEEEEEEECCE----EEEEEEEEE
Confidence 333444568999999999999999998664 455566664
No 377
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.66 E-value=6.1e-08 Score=56.17 Aligned_cols=53 Identities=17% Similarity=0.208 Sum_probs=39.5
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA 56 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 56 (115)
.|.+.|++++..+......++.. .....|.|.++..+|+|.|.|.+.+..+..
T Consensus 129 ~~~v~W~~~~~~~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 181 (191)
T 1epf_A 129 PPTIIWKHKGRDVILKKDVRFIV---LSNNYLQIRGIKKTDEGTYRCEGRILARGE 181 (191)
T ss_dssp CCEEEEEETTEEGGGGCCTTEEE---CTTSCEEETTCCGGGCEEEEEEEEEGGGTE
T ss_pred CCEEEEEECCEEeeccCCceEEE---ecCCeEEECCCChhhCEEEEEEEEEeccee
Confidence 36899999999886422334333 234479999999999999999999876433
No 378
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.66 E-value=5.1e-08 Score=59.12 Aligned_cols=25 Identities=36% Similarity=0.666 Sum_probs=22.7
Q ss_pred EEEEeccCCCCCeeeEEEeecCccc
Q psy3272 80 TLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 80 ~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.|.|.++..+|.|.|+|.+.|..+.
T Consensus 114 ~L~I~~v~~~D~G~Y~C~a~n~~~~ 138 (254)
T 2c1o_A 114 TLKISRVEAEDLGIYYCVQGSHFPP 138 (254)
T ss_dssp EEEESSCCGGGCSEEEEEECSSSSC
T ss_pred EEEECcCCcccCEEEEEEEEcCcce
Confidence 7999999999999999999998653
No 379
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.66 E-value=1.1e-07 Score=55.76 Aligned_cols=59 Identities=22% Similarity=0.409 Sum_probs=43.6
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEEec
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMELSV 64 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v~g 64 (115)
.|.+.|++++..+... ..++.. ....|.|.++..+|.|.|.|.+.|..+...+ .|.|..
T Consensus 141 ~~~v~W~~~~~~l~~~-~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 141 EPTISWKKDGSPLDDK-DERITI----RGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp CCEEEEEETTEEECTT-STTEEE----ETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCEEEEEECCccCCCC-cceEEc----cCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEe
Confidence 3689999999988752 223332 2357999999999999999999998876543 455543
No 380
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.66 E-value=8.8e-09 Score=56.17 Aligned_cols=37 Identities=38% Similarity=0.579 Sum_probs=32.8
Q ss_pred eEEEEEeccCCCCC-eeeEEEeecCccceeeEEEEEEe
Q psy3272 78 KHTLTIKNVQSTDF-GNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ~~~l~i~~~~~~d~-G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.++..+|. |.|+|.|.|..|.....+.|.|.
T Consensus 75 ~~~L~I~~v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~ 112 (122)
T 2cry_A 75 ISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQ 112 (122)
T ss_dssp EEEEECTTCCHHHHHSCEEEEEECSSCEEEEEECCCCS
T ss_pred EEEEEEcCCChhhCCceEEEEEECCCCeEEEEEEEEEC
Confidence 34799999999999 99999999999998888887764
No 381
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.65 E-value=4.1e-08 Score=56.02 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=37.3
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK 57 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 57 (115)
|.+.|++++..+.. . .....|.|.++..+|+|.|.|.+.+..+...
T Consensus 116 ~~~~W~~~g~~~~~--~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~ 161 (170)
T 3ry4_A 116 VKVTFFQNGKSQKF--S--------HLDPTFSIPQANHSHSGDYHCTGNIGYTLFS 161 (170)
T ss_dssp EEEEEEETTEEEEE--E--------SSCCEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceEEEEECCeEccc--c--------CCCCeEEEEeccccCCEEEEEEEEeCcCccc
Confidence 57999999987754 1 2356799999999999999999999876533
No 382
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.65 E-value=2.5e-08 Score=59.03 Aligned_cols=52 Identities=15% Similarity=0.330 Sum_probs=39.0
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecC-CCCCCeEEEEEeecCCcce
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNV-QSTDFGNYSCVADNNLGRA 56 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~-~~~d~G~y~C~~~~~~~~~ 56 (115)
|.|+|+|++..+......+... . ....|.|.++ +.+|+|.|+|.+.|..+..
T Consensus 141 p~i~W~k~~~~l~~~~~~~~~~-~--~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~ 193 (204)
T 1sy6_A 141 SEILWQHNDKNIGGDEDDKNIG-S--DEDHLSLKEFSELEQSGYYVCYPRGSKPED 193 (204)
T ss_dssp SCEEEEETTEEESCCTTCTTEE-E--ETTEEEETTCCHHHHCEEEEEEETTSCGGG
T ss_pred CceEEEECCEECCCccCCceEe-c--CCCEEEEeeCCccccCEEEEEEeccCCCCc
Confidence 6899999999886521111111 1 2568999999 9999999999999988763
No 383
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.64 E-value=2e-07 Score=51.81 Aligned_cols=64 Identities=22% Similarity=0.348 Sum_probs=42.3
Q ss_pred cceEEEEC--CEE---eCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc------eeEEEEEeccc
Q psy3272 2 GMMSWYQD--TFL---IEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR------AKKYMELSVSV 66 (115)
Q Consensus 2 p~v~W~~~--~~~---~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~------~~~~~~v~g~~ 66 (115)
|.|.|||+ +.. +.. ...++..........|+|.+++.+|+|.|.|.+.+..+. ....|.|.+.|
T Consensus 45 ~~v~W~r~~~g~~~~~l~~-~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g~~~~~~g~gt~L~V~~~p 119 (133)
T 3khq_A 45 GALTWFRKRGSQQPQELVS-EEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSANHNVTDSCGTELLVLGFS 119 (133)
T ss_dssp SCEEEEEECTTSCCEECCC-TTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC-------CCCEEEEEC---
T ss_pred CEEEEEEeCCCCCCEEEEE-eCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCCCcceeECCCEEEEEEecc
Confidence 57899997 322 111 156777665566788999999999999999999876531 11256666543
No 384
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.64 E-value=3.7e-08 Score=64.92 Aligned_cols=55 Identities=22% Similarity=0.306 Sum_probs=39.4
Q ss_pred CcceEEEECCEEeCCC-CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPS-VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|+|++..+... ...++.. .....|.|.+++.+|+|.|+|.+.+..|....
T Consensus 414 ~p~i~W~~~~~~~~~~~~~~~~~~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~ 469 (477)
T 2id5_A 414 PPAILWLSPRKHLVSAKSNGRLTV---FPDGTLEVRYAQVQDNGTYLCIAANAGGNDSM 469 (477)
T ss_dssp CCEEEEECTTSCBC-------CEE---CTTSCEEESSCCSTTCEEEEEEEEETTEEEEE
T ss_pred CCEEEEEECCccccccCCCceEEe---CCCCEEEEeeCChHHCEEEEEEEEeCCCcEEE
Confidence 4789999998766531 0222222 23457999999999999999999999887766
No 385
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.64 E-value=3.2e-08 Score=54.95 Aligned_cols=57 Identities=21% Similarity=0.375 Sum_probs=38.7
Q ss_pred CcceEEEECCEEeCCCC--------CCCEEEEE---eCCeEEEEEecCCCCCCeEEEEEeecCCccee
Q psy3272 1 MGMMSWYQDTFLIEPSV--------SDRRLMET---RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK 57 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~--------~~~~~~~~---~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 57 (115)
.|.|.|++++..+.... ..++.... ......|.|.++..+|+|.|.|.+.|..+...
T Consensus 50 ~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 50 VPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp CCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCCGGGCEEEEEEEECCTTSSS
T ss_pred CCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCCcccCEEEEEEEEecCCccc
Confidence 37899999876543200 11222211 11357899999999999999999999876653
No 386
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.63 E-value=3.5e-08 Score=60.01 Aligned_cols=102 Identities=19% Similarity=0.189 Sum_probs=57.5
Q ss_pred ceEEEECCEEeCCCCCCCEEEEE---eCCeEEEEEecCCCCCCeEEEEEeecCCcce--eEE------------EEE---
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMET---RGNKHTLTIKNVQSTDFGNYSCVADNNLGRA--KKY------------MEL--- 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~---~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~--~~~------------~~v--- 62 (115)
.|+|+|+|..+............ ....+.|.|.....+|.|.|.|.+.+..... ... +.+
T Consensus 59 ~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~ 138 (240)
T 4acp_A 59 KFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPP 138 (240)
T ss_dssp EEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECC
T ss_pred EEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECC
Confidence 69999999987541000000000 0113567777666677899999999765421 111 111
Q ss_pred ----------------ec-ccCC-cEEEEEeCCe--------------------EEEEEeccCCCCCeeeEEEeecCccc
Q psy3272 63 ----------------SV-SVSD-RRLMETRGNK--------------------HTLTIKNVQSTDFGNYSCVADNNLGR 104 (115)
Q Consensus 63 ----------------~g-~~~~-~~~~~~~~~~--------------------~~l~i~~~~~~d~G~y~C~~~n~~~~ 104 (115)
.| .|.+ .+.|..++.. ..|.|......+.|.|+|.+.+..-.
T Consensus 139 ~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l~ 218 (240)
T 4acp_A 139 SRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 218 (240)
T ss_dssp CGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred ChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCCC
Confidence 33 4443 6788775421 23444444445688999999998753
No 387
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.63 E-value=1.6e-08 Score=59.36 Aligned_cols=56 Identities=9% Similarity=0.044 Sum_probs=38.9
Q ss_pred CcceEEEECCEEeCCCCCCCEEEE-EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLME-TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|++++..+.. ....... .....+.|.|..+..+|.|.|+|.+.|..+....
T Consensus 147 ~p~i~W~~~~~~~~~--~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~ 203 (218)
T 4frw_A 147 APSVTWDTEVKGTTS--SRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQ 203 (218)
T ss_dssp CCEEEEEESSCCEEE--EEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCE
T ss_pred CceEEEEECCccccc--CceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEE
Confidence 378999999876643 1111100 0012457999999999999999999998776654
No 388
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.63 E-value=2e-08 Score=58.14 Aligned_cols=44 Identities=14% Similarity=0.153 Sum_probs=34.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
|.|+|+|+|.++.. ..+ +.|..+..+|.|.|.|.+.|..+...+
T Consensus 125 p~i~W~~~g~~l~~--~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~ 168 (176)
T 1hng_A 125 VELKLYQGKEHLRS--LRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESE 168 (176)
T ss_dssp CEEEEEETTEEEEE--ESS-----------SEEEEECSCCSSCEEEEEEETTEEEEE
T ss_pred cEEEEEECCEECCC--CCc-----------EEEEEEEccCCeEEEEEEEecCCCcee
Confidence 78999999998865 222 344467789999999999998887765
No 389
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.62 E-value=2.8e-07 Score=49.32 Aligned_cols=58 Identities=19% Similarity=0.242 Sum_probs=38.2
Q ss_pred CcceEEEECC----EEeCCCCCCCEEEE--EeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDT----FLIEPSVSDRRLME--TRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~----~~~~~~~~~~~~~~--~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|.|-+ .+++...+-+.... .......|.|.++...|+|.|+|.+.+..+...+
T Consensus 44 rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~~g~ieS 107 (122)
T 1xau_A 44 RPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFNSQVINS 107 (122)
T ss_dssp CCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCCCCceee
Confidence 4899999965 34432111000000 0113568999999999999999999998777666
No 390
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=1.7e-07 Score=49.47 Aligned_cols=71 Identities=18% Similarity=0.131 Sum_probs=44.4
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecc---cCCcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVS---VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
..+.-.+.|.+ ...... ...-+|. +..++.+..++....|.|.++..+|+|.|+|.|.|. ..+..+.|.|.
T Consensus 21 ~G~~v~l~C~v-~p~p~v--~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L~V~ 94 (100)
T 2yuz_A 21 LGKEICLKCEI-SENIPG--KWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKVHVI 94 (100)
T ss_dssp TTSCCCEEEEC-SSCCCE--EEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEEEEE
T ss_pred CCCCEEEEEEe-CCCCeE--EEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEEEEe
Confidence 34455678877 322111 1222232 223445555556678999999999999999999998 44455566664
No 391
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.62 E-value=3.4e-08 Score=58.46 Aligned_cols=55 Identities=11% Similarity=0.111 Sum_probs=39.6
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE---EEEEeccc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK---YMELSVSV 66 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~---~~~v~g~~ 66 (115)
|.++|+|+|..+.. . .....|.|.++..+|+|.|+|.+.|..+...+ .|.|.+.+
T Consensus 119 ~~v~W~k~g~~~~~--~--------~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 119 HKVTYLQNGKGRKY--F--------HHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp EEEEEEETTEEEEE--E--------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred ceEEEEECCcEeec--c--------cCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 57999999987653 1 12467999999999999999999985433332 56666544
No 392
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.61 E-value=3e-08 Score=57.05 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=35.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR 55 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 55 (115)
|.+.|+|+|..+.. . .....|.|.+++.+|+|.|.|.+.|..+.
T Consensus 119 ~~~~W~k~g~~~~~--~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~ 162 (175)
T 1fnl_A 119 HKVTYLQNGKDRKY--F--------HHNSDFHIPKATLKDSGSYFCRGLVGSKN 162 (175)
T ss_dssp EEEEEEETTEEEEE--E--------EECCCEEESSCCGGGCEEEEEEEEETTEE
T ss_pred eEEEEEECCeEccC--C--------CCCCEEEEcccChhhCeEEEEEEEcCCCC
Confidence 48999999987753 1 13567999999999999999999986544
No 393
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.60 E-value=8.2e-07 Score=47.27 Aligned_cols=52 Identities=29% Similarity=0.549 Sum_probs=36.6
Q ss_pred cceEEEECC--E---EeC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQDT--F---LIE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~~--~---~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.|.|||.. . .+. .....++..........|+|.+++.+|+|.|.|.+.+..
T Consensus 31 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 94 (108)
T 1jhl_L 31 KSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYICQQHNEY 94 (108)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCSEEEEEECSSS
T ss_pred ceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 689999953 1 111 011356665544556789999999999999999998753
No 394
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.60 E-value=6.8e-08 Score=63.22 Aligned_cols=65 Identities=20% Similarity=0.358 Sum_probs=42.5
Q ss_pred CcceEEEECCE-EeCCC-CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecccCC
Q psy3272 1 MGMMSWYQDTF-LIEPS-VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSVSD 68 (115)
Q Consensus 1 ~p~v~W~~~~~-~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~~ 68 (115)
.|.|+|++++. .+... ...++.. .....|.|.+++.+|+|.|+|.+.|..|.... .+.|.+.|.+
T Consensus 369 ~p~i~W~~~~~~~~~~~~~~~~~~~---~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~v~~~~~~ 437 (440)
T 3zyj_A 369 LTSVSWITPNGTVMTHGAYKVRIAV---LSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTHHH 437 (440)
T ss_dssp TSEEEEECTTSCEEESSSCCSSEEE---CTTCCEEESSCCSTTCEEEEEEEECSSCEEEEEEEEEEC-----
T ss_pred CCceEEEeCCCceeeccCCCceEEE---ccCCeEEEccCChhhCEEEEEEEEcCCCcEEEEEEEEEeccccc
Confidence 47899999544 33321 1223332 23456999999999999999999999988877 5555555443
No 395
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.60 E-value=1.4e-06 Score=58.12 Aligned_cols=52 Identities=8% Similarity=0.034 Sum_probs=33.3
Q ss_pred ceEEEECCEEeCCC-CCCCEEEE---EeCCeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 3 MMSWYQDTFLIEPS-VSDRRLME---TRGNKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 3 ~v~W~~~~~~~~~~-~~~~~~~~---~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
.|+|+|+|..+... ........ .....+.|.|.....+|.|.|.|.+.+...
T Consensus 330 ~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~ 385 (512)
T 1zvo_C 330 HLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSL 385 (512)
T ss_pred EEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCC
Confidence 79999999876521 00111000 001135689988888999999999987643
No 396
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.59 E-value=1.5e-06 Score=58.04 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=25.8
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
.|+.+... .....|.|.+++.+|+|.|.|.+.+.
T Consensus 67 ~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~ 102 (512)
T 1zvo_C 67 GRVTISVDTSRNQFSLNLRSMSAADTAMYYCARGNP 102 (512)
T ss_pred CceEEEecCCCCEEEEEECcCCHHHCEEEEEEEECC
Confidence 45554322 23578999999999999999999764
No 397
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=98.59 E-value=7.6e-07 Score=52.54 Aligned_cols=63 Identities=21% Similarity=0.202 Sum_probs=46.3
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEE------------eCCeEEEEEeccCCCCCeeeEEEeecCcccee
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMET------------RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK 106 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~------------~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~ 106 (115)
..+.-...|.+ .|.|.|.+.|.. .+....|.|.+++.+|.|.|.|.|.|..+..+
T Consensus 15 ~G~~v~L~C~~-------------~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~ 81 (202)
T 1vca_A 15 IGDSVSLTCST-------------TGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLE 81 (202)
T ss_dssp TTSCEEEEEEE-------------ESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEE
T ss_pred CCCcEEEEEee-------------cCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEe
Confidence 34455677776 445555555544 22345799999999999999999999998877
Q ss_pred eEEEEEEe
Q psy3272 107 KYMELSEL 114 (115)
Q Consensus 107 ~~~~l~v~ 114 (115)
..+.|.|.
T Consensus 82 ~~~~l~V~ 89 (202)
T 1vca_A 82 KGIQVEIY 89 (202)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEE
Confidence 78878774
No 398
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.57 E-value=4.1e-07 Score=47.38 Aligned_cols=71 Identities=18% Similarity=0.078 Sum_probs=45.6
Q ss_pred CCCCCeEEEEEeecCCcceeEEEEEecc---cCCcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 38 QSTDFGNYSCVADNNLGRAKKYMELSVS---VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 38 ~~~d~G~y~C~~~~~~~~~~~~~~v~g~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...+.-.+.|.+..... .....-+|. +.+++.+..++....|.|.++..+|+|.|+|.|.|.. ....|.|.
T Consensus 18 ~~G~~v~l~C~v~~~~~--~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~~----~sa~L~V~ 91 (93)
T 1waa_A 18 FVGETAHFEIELSEPDV--HGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTK----SAANLKVK 91 (93)
T ss_dssp ETTSCEEEEEEESSSSC--CCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTEE----EEEEEEEE
T ss_pred eCCCCEEEEEEECCCCC--eEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCCc----EEEEEEEE
Confidence 35566778888753221 112222332 2334555556667789999999999999999999853 45556654
No 399
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.57 E-value=3.1e-07 Score=54.45 Aligned_cols=45 Identities=20% Similarity=0.196 Sum_probs=37.3
Q ss_pred EEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 70 RLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 70 ~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
+..........|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 60 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 104 (203)
T 4fa8_A 60 FDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVV 104 (203)
T ss_dssp EEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEcCCEEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEec
Confidence 334445566789999999999999999999999998888887764
No 400
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.56 E-value=8.8e-08 Score=56.79 Aligned_cols=58 Identities=22% Similarity=0.305 Sum_probs=39.5
Q ss_pred ceEEEECCEEeCCCCCCC-EEEEE-------eCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEE
Q psy3272 3 MMSWYQDTFLIEPSVSDR-RLMET-------RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMEL 62 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~-~~~~~-------~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v 62 (115)
.|.|++++..+.. ... ..... ......|.|.+++.+|+|.|.|.+.|..+.... .|.|
T Consensus 138 ~i~W~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V 205 (213)
T 2x1w_L 138 DFNWEYPSSKHQH--KKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 205 (213)
T ss_dssp EEEEECSCSSCCS--EEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEEecCCccce--EEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEE
Confidence 6899998875432 110 00000 112457999999999999999999998887766 4444
No 401
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.56 E-value=1.6e-07 Score=61.97 Aligned_cols=53 Identities=23% Similarity=0.234 Sum_probs=45.6
Q ss_pred ecccCCcEEEEEeCC---------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 63 SVSVSDRRLMETRGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
.|.|.|.+.|.+.+. ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 410 ~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 477 (477)
T 2id5_A 410 DGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS 477 (477)
T ss_dssp EEESCCEEEEECTTSCBC-------CEECTTSCEEESSCCSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cccCCCEEEEEECCccccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeCCCcEEEEEEEEEeC
Confidence 788999999987542 23699999999999999999999999999999888863
No 402
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.55 E-value=4.9e-07 Score=46.99 Aligned_cols=62 Identities=21% Similarity=0.309 Sum_probs=38.9
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecc---cCCcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCc
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVS---VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 102 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~ 102 (115)
..+.-.+.|.+...... ....-+|. +..++.+..++....|.|.++..+|+|.|+|.|.|..
T Consensus 20 ~g~~v~l~C~v~~p~~~--v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 84 (91)
T 2lvc_A 20 TSECVMLACEVDREDAP--VRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDEC 84 (91)
T ss_dssp TTCCEEEEEECSCTTSC--CEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSCE
T ss_pred CCCcEEEEEEECCCCcE--EEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcceE
Confidence 45566788886432111 12222332 2234444555566789999999999999999997753
No 403
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.55 E-value=2e-07 Score=56.06 Aligned_cols=53 Identities=19% Similarity=0.332 Sum_probs=36.6
Q ss_pred CcceEEEECCEEeCCCCCCCEE--E-------------------EEeCCeEEEEEecCCCCCCeEEEEEeecCCcc
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRL--M-------------------ETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR 55 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~--~-------------------~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 55 (115)
.|.|+|+|++..+.. ..... . ........|.|.++..+|+|.|.|.+.|..+.
T Consensus 165 ~p~v~W~k~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 165 NANVTWYTGPTFFEN--YETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp TCEEEEEEEEECSSC--SSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred CCeeEEEeCCCcccc--cccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccc
Confidence 368999999887754 21100 0 00012368999999999999999999995543
No 404
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.55 E-value=5.9e-07 Score=60.92 Aligned_cols=56 Identities=25% Similarity=0.306 Sum_probs=47.0
Q ss_pred EEEEecccCCcEEEEEeC---------------CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 59 YMELSVSVSDRRLMETRG---------------NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 59 ~~~v~g~~~~~~~~~~~~---------------~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.|.|.+.|.+++ ....|.|.++...|+|.|+|.|.|..|..+..+.|.|.
T Consensus 503 ~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~~G~~~~~v~l~Vt 573 (573)
T 3uto_A 503 YCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT 573 (573)
T ss_dssp EEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeCCCcEEEEEEEEEC
Confidence 344578888888887644 34589999999999999999999999999999999873
No 405
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.55 E-value=9.5e-08 Score=55.87 Aligned_cols=51 Identities=10% Similarity=0.133 Sum_probs=37.0
Q ss_pred cceEEEECCEEeCCCCCCC-EEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 2 GMMSWYQDTFLIEPSVSDR-RLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
+.+.|+|++..+.. ... ...........|.|.+++.+|+|.|.|.+.|..+
T Consensus 128 ~~~~w~k~g~~~~~--~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 128 DTFLLCKERAAHPL--LCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEETTCCCGG--GSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred CEEEEEeCCCcccc--eeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 46899999986654 221 1111223467899999999999999999998654
No 406
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.52 E-value=3.6e-07 Score=53.15 Aligned_cols=47 Identities=21% Similarity=0.451 Sum_probs=37.3
Q ss_pred c-ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee
Q psy3272 2 G-MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK 57 (115)
Q Consensus 2 p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 57 (115)
| .|.|++++..+.. .... .....|.|.++. |+|.|.|.+.|..+...
T Consensus 136 p~~v~W~~~~~~~~~--~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~ 183 (195)
T 2c5d_C 136 PVDLLWLQDAVPLAT--APGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTT 183 (195)
T ss_dssp CCEEEEEESSCBSSS--STTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEE
T ss_pred CCEEEEEECCEeccC--CCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceE
Confidence 5 7999999998876 3321 356789998886 78999999999887774
No 407
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.52 E-value=1.1e-07 Score=56.75 Aligned_cols=61 Identities=11% Similarity=0.089 Sum_probs=32.2
Q ss_pred CcceEEEECCEE-eCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 1 MGMMSWYQDTFL-IEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 1 ~p~v~W~~~~~~-~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
.|.|+|+|++.. ++.. ..............+.+..+..+|.|.|+|.+.|..+.......|
T Consensus 148 ~p~i~W~k~~~~~~~~~-~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v 209 (226)
T 4f80_A 148 QPQIQWSNNKGENIPTV-EAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASI 209 (226)
T ss_dssp CCEEEEECTTSCBCCCE-ECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCceEcCCC-ceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEE
Confidence 478999996543 3320 111111101112334455677899999999999998877764333
No 408
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.52 E-value=1.2e-07 Score=52.13 Aligned_cols=36 Identities=33% Similarity=0.550 Sum_probs=33.7
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
...|.|.+++.+|+|.|+|.+.|..+..+..+.|+|
T Consensus 83 ~~sL~I~~v~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 83 NASLRLKNVQLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp BCCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEEEECCCChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 457999999999999999999999999999999987
No 409
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.50 E-value=4.2e-08 Score=57.45 Aligned_cols=53 Identities=21% Similarity=0.478 Sum_probs=39.5
Q ss_pred cceEEEECCEEeCCCCCCCE-------EEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcce
Q psy3272 2 GMMSWYQDTFLIEPSVSDRR-------LMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA 56 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~-------~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~ 56 (115)
|.|.|++++..+.. .... ..........|.|.++..+|.|.|.|.+.|..+..
T Consensus 138 ~~v~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 138 SEYTWFKDGIVMPT--NPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp CEEEEEETTCCCCS--CSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred ceeEEEECCeeCCC--ccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 68999999987765 2210 00011245789999999999999999999988776
No 410
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.49 E-value=4.3e-07 Score=54.40 Aligned_cols=67 Identities=21% Similarity=0.331 Sum_probs=42.6
Q ss_pred cceEEEE----CCEEeCCCCCCCEEEEE------eCCeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecccCC
Q psy3272 2 GMMSWYQ----DTFLIEPSVSDRRLMET------RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVSVSD 68 (115)
Q Consensus 2 p~v~W~~----~~~~~~~~~~~~~~~~~------~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~~~~ 68 (115)
|.+.|++ ++..+............ ......|.|.++..+|.|.|.|.+.|..+.... .|.|.+.|.+
T Consensus 144 p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 144 PHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAA 222 (241)
T ss_dssp CEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC------
T ss_pred CEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCC
Confidence 6899999 77766542111111110 113567999999999999999999998888877 4555554443
No 411
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.48 E-value=3.1e-06 Score=45.32 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=30.2
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceee-EEEEEEe
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKK-YMELSEL 114 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~-~~~l~v~ 114 (115)
.+.|.|.++...|+|.|+|.|.|..|..++ ...|.|.
T Consensus 78 ~fiL~f~~V~~sDsG~YrCsAn~~~g~ieSHs~ti~V~ 115 (122)
T 1xau_A 78 VFVLHFKPIHLSDNGSYSCSTNFNSQVINSHSVTIHVR 115 (122)
T ss_dssp EEEEEETTCCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred eEEEEEeeEEEcCCccEEEEeeCCCCceeeeEEEEEEE
Confidence 458999999999999999999999888555 4455554
No 412
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.47 E-value=4e-07 Score=49.10 Aligned_cols=27 Identities=22% Similarity=0.197 Sum_probs=23.7
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
...+|.|.+++.+|+|.|+|.+.+..+
T Consensus 70 ~ngSL~I~nvt~~D~G~Ytc~v~~~~~ 96 (111)
T 2qsq_A 70 PNASLLIQNIIQNDAGFYTLHVIKSDL 96 (111)
T ss_dssp TTSCEEECSCCGGGCEEEEEEEEETTS
T ss_pred cCCcEEEccCcccCCeEEEEEEEeCCC
Confidence 456899999999999999999987654
No 413
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.47 E-value=1.9e-07 Score=50.37 Aligned_cols=62 Identities=24% Similarity=0.268 Sum_probs=41.2
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecccCCcEEEEEeCCe-----------------EEEEEe-----ccCCCCCeeeEE
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSVSDRRLMETRGNK-----------------HTLTIK-----NVQSTDFGNYSC 96 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~-----------------~~l~i~-----~~~~~d~G~y~C 96 (115)
..+.-...|.+ .|.|.|.+.|.+++.. ..+.+. ++..+|.|.|+|
T Consensus 23 ~G~~v~L~C~~-------------~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~Y~C 89 (117)
T 2v9t_A 23 KGEPATLNCKA-------------EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVC 89 (117)
T ss_dssp TTCCEEECCEE-------------EEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEEEEE
T ss_pred CCCcEEEEEEC-------------CccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEEEEE
Confidence 34455666665 6777888888765411 112233 457899999999
Q ss_pred EeecCccceee-EEEEEE
Q psy3272 97 VADNNLGRAKK-YMELSE 113 (115)
Q Consensus 97 ~~~n~~~~~~~-~~~l~v 113 (115)
.|.|..|.... .+.|.+
T Consensus 90 ~a~N~~G~~~s~~~~l~~ 107 (117)
T 2v9t_A 90 VARNYLGEAVSHDASLEV 107 (117)
T ss_dssp EEEETTEEEECCCEEEEE
T ss_pred EEEeCccceEeeeEEEEh
Confidence 99999998544 555554
No 414
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.47 E-value=1.7e-07 Score=61.60 Aligned_cols=61 Identities=23% Similarity=0.394 Sum_probs=41.8
Q ss_pred CcceEEEECC-EEeCCC-CCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEE--EEEec
Q psy3272 1 MGMMSWYQDT-FLIEPS-VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKY--MELSV 64 (115)
Q Consensus 1 ~p~v~W~~~~-~~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~--~~v~g 64 (115)
.|.|+|++++ ..+... ...++.. .....|.|.+++.+|+|.|+|.+.|..|..... +.|.+
T Consensus 379 ~p~i~W~~~~~~~~~~~~~~~~~~~---~~~g~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~ 443 (452)
T 3zyi_A 379 MSSVKWLLPNGTVLSHASRHPRISV---LNDGTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVST 443 (452)
T ss_dssp TSEEEEECTTSCEECSSCCCSSCEE---CTTSCEECSSCCTTCCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred CCcEEEEeCCCcEeccCCCCCCEEE---CCCCeEEEeecCHHHCEEEEEEEEcCCCcEEEEEEEEEEc
Confidence 4789999954 444431 1223322 234569999999999999999999999888774 44433
No 415
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.46 E-value=2e-06 Score=48.13 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=32.2
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.++..+|+|.|+|.+.|. +.....+.|.|.
T Consensus 102 ~~~L~I~~v~~~DsG~Y~C~~~n~-~~~~~~~~L~V~ 137 (145)
T 1z9m_A 102 ELSISISNVALADEGEYTCSIFTM-PVRTAKSLVTVL 137 (145)
T ss_dssp EEEEEECSCCGGGCEEEEEEECSS-SCEEEEEEEEEE
T ss_pred eEEEEECCCChhhCEEEEEEEEcC-CCceEEEEEEEE
Confidence 568999999999999999999999 888888888775
No 416
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.44 E-value=1.7e-06 Score=44.86 Aligned_cols=43 Identities=35% Similarity=0.628 Sum_probs=33.0
Q ss_pred cEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEeC
Q psy3272 69 RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSELE 115 (115)
Q Consensus 69 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~~ 115 (115)
++....++....|.|.++..+|.|.|+|.+ |.....+.|.|.+
T Consensus 53 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g~~~~~~~l~V~e 95 (95)
T 2k1m_A 53 KYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLKVIE 95 (95)
T ss_dssp TCEEEEETTEEEEEESSCCTTCCSEEEEEE----TTEEEEEEEEEEC
T ss_pred cEEEEEcCCEEEEEEcCCCcccCEEEEEEE----CCceEEEEEEEeC
Confidence 444455556678999999999999999999 4455667777764
No 417
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.44 E-value=1.9e-06 Score=51.97 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=27.4
Q ss_pred CCCEEEEE--eCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 18 SDRRLMET--RGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 18 ~~~~~~~~--~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
..|+.+.. ......|.|.+++.+|+|.|.|.+.+.
T Consensus 61 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~ 97 (229)
T 1hxm_A 61 KDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTL 97 (229)
T ss_dssp TTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECC
T ss_pred CCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEecC
Confidence 35666543 245678999999999999999999764
No 418
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.44 E-value=2.1e-07 Score=54.60 Aligned_cols=55 Identities=20% Similarity=0.321 Sum_probs=38.9
Q ss_pred cceEEEECCE--EeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 2 GMMSWYQDTF--LIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 2 p~v~W~~~~~--~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
|.|+|++++. .+.. ... .......|.|.++..+|+|.|.|.+.|..+.....+.+
T Consensus 152 ~~v~W~~~~~~~~~~~--~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l 208 (214)
T 3jz7_A 152 LQFEWQKLSDSQTMPT--PWL----AEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRL 208 (214)
T ss_dssp CEEEEEECSTTCCCCG--GGG----GGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CEEEEEECCCCCccCc--cce----eccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEE
Confidence 6899999543 3332 111 11234589999999999999999999998877664433
No 419
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.44 E-value=5.3e-08 Score=57.02 Aligned_cols=50 Identities=6% Similarity=-0.114 Sum_probs=32.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEE--eCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMET--RGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.++|+|++..+.. ........ ......|.|.+++.+|+|.|.|.+.+..
T Consensus 128 ~~~~W~k~g~~~~~--~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 179 (196)
T 2d3v_A 128 DRFILTEEGDHKLS--WTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRH 179 (196)
T ss_dssp SEEEEEEC---CCE--EEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETT
T ss_pred CEEEEEccCCcccc--cccccccccCCCceeEEEeeecCcccCeeEEEEEEccC
Confidence 67999999987643 11000000 1124789999999999999999999865
No 420
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.43 E-value=4.1e-07 Score=59.57 Aligned_cols=51 Identities=24% Similarity=0.314 Sum_probs=41.8
Q ss_pred cccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 64 VSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 64 g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
+.|.|.+.|...+. ...|.|.+++.+|+|.|+|.|.|..|..+..+.+.|.
T Consensus 366 ~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~~~v~ 432 (440)
T 3zyj_A 366 STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVT 432 (440)
T ss_dssp SSTTSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCCCCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 45677778875321 2469999999999999999999999999999888875
No 421
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.43 E-value=6.2e-07 Score=48.44 Aligned_cols=30 Identities=30% Similarity=0.620 Sum_probs=25.1
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
...|.|.+++.+|+|.|.|.+.+..+....
T Consensus 88 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~ 117 (126)
T 1eaj_A 88 DASINVTNLQLSDIGTYQCKVKKAPGVANK 117 (126)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred eEEEEECcCChHHCeEEEEEEEcCCccCCc
Confidence 367999999999999999999987655444
No 422
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.43 E-value=7.5e-07 Score=51.18 Aligned_cols=45 Identities=27% Similarity=0.384 Sum_probs=35.9
Q ss_pred c-ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCccee
Q psy3272 2 G-MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAK 57 (115)
Q Consensus 2 p-~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~ 57 (115)
| .+.|++++..+.. .. .....|.|.++ +|+|.|.|.+.|..+...
T Consensus 128 p~~v~W~~~~~~~~~--~~-------~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~ 173 (182)
T 1rhf_A 128 PVTIVWWRGTTKIGG--PA-------PSPSVLNVTGV--TQSTMFSCEAHNLKGLAS 173 (182)
T ss_dssp CCEEEEEETTEECSC--SE-------ESSEEEEECCC--SSCEEEEEEEEETTEEEE
T ss_pred CCEEEEEcCCeECCC--CC-------CCceEEEEecc--ccCeEEEEEEECCCCCcc
Confidence 5 7999999998865 21 15678888887 589999999999887764
No 423
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.42 E-value=8.6e-07 Score=56.73 Aligned_cols=51 Identities=24% Similarity=0.221 Sum_probs=42.6
Q ss_pred ecccCCcEEEEEeCC---------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRGN---------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~---------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.| |.|.+.|.+.+. ...|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 271 ~g-p~p~i~W~~~~~~~~~~~~~~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 336 (361)
T 2xot_A 271 KQ-QGMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVY 336 (361)
T ss_dssp SS-TTCEEEEECTTSCBCCSCCSSSSEEEETTEEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred eC-CCCeEEEEeCCCeeEeecccCCceEeecCeEEEeecCcccCEEEEEEEecCCCccEEEEEEEEE
Confidence 56 788888877432 1379999999999999999999999999888888874
No 424
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.42 E-value=2.9e-07 Score=53.40 Aligned_cols=46 Identities=15% Similarity=0.247 Sum_probs=35.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.+.|+|+|..+.. .... ......|.|.+++.+|+|.|.|.+.+..
T Consensus 122 ~~~~w~k~g~~~~~--~~~~----~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 167 (184)
T 2gi7_A 122 DQFALYKEGDPAPY--KNPE----RWYRASFPIITVTAAHSGTYRCYSFSSR 167 (184)
T ss_dssp CEEEEEECCCCTTS--CCCC----EEEEESSSEEEETTCCSEEEEEEEECTT
T ss_pred cEEEEEECCCcCcc--eecC----CCceEEEEEccCCccCCeEEEEEEEeCC
Confidence 57899999987654 2221 1235678999999999999999999865
No 425
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.41 E-value=1e-06 Score=51.52 Aligned_cols=58 Identities=9% Similarity=0.166 Sum_probs=36.4
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCC-e--EEEEEecCCCCCCeEEEEEeecCCcceeEEEE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGN-K--HTLTIKNVQSTDFGNYSCVADNNLGRAKKYME 61 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~-~--~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 61 (115)
.|.|+|+++|..+.. ..... ..... + ....+..+..+|.|.|+|.+.|..+.....+.
T Consensus 136 ~p~i~W~k~g~~l~~--~~~~~-~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 136 EPHLSWLENGEELNA--INTTV-SQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp CEEEEEEESSCEECC--SEEEE-EECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred CCEEEEEECCEECcc--ccceE-EecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 378999999988875 32211 11111 1 11123344568999999999998887766443
No 426
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.41 E-value=2.8e-07 Score=53.63 Aligned_cols=46 Identities=13% Similarity=0.165 Sum_probs=35.0
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.+.|+|+|..+.. . .........|.|.+++.+|+|.|.|.+.+..
T Consensus 127 ~~~~w~k~g~~~~~--~----~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 127 SMFLLLKEGRSSHV--Q----RGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp SEEEEEEESSSCEE--E----EEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred CEEEEEECCccccc--c----ccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 57899999865542 1 1123457889999999999999999998653
No 427
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.41 E-value=1.9e-06 Score=45.94 Aligned_cols=51 Identities=29% Similarity=0.523 Sum_probs=36.1
Q ss_pred cceEEEECC--E---EeC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--F---LIE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~---~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|||.. . .+. .....++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 33 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (109)
T 2q20_A 33 NYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDN 95 (109)
T ss_dssp TCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhCEEEEEEEeeC
Confidence 579999853 1 111 00135666554556778999999999999999999764
No 428
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.41 E-value=1.1e-06 Score=52.95 Aligned_cols=52 Identities=29% Similarity=0.492 Sum_probs=36.3
Q ss_pred cceEEEE--CCEEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQ--DTFLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~--~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.|.|+| ++..+. .....++..........|.|.+++.+|+|.|.|.+.+..
T Consensus 165 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 165 SNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred ceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 6899999 554331 101345554334456789999999999999999998743
No 429
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.40 E-value=1.5e-06 Score=48.18 Aligned_cols=35 Identities=26% Similarity=0.453 Sum_probs=28.2
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEe
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELS 63 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~ 63 (115)
...|.|.+++.+|+|.|.|.+.+..+.... .|.|.
T Consensus 84 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 84 KVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEEEccCCHHHCEEEEEEEEcCCCceEEEEEEEEe
Confidence 578999999999999999999987665444 45554
No 430
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.39 E-value=1.4e-06 Score=51.59 Aligned_cols=52 Identities=23% Similarity=0.388 Sum_probs=41.5
Q ss_pred ecccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.+.|.+++. ...|.|.++..+|.|.|+|.+.|..+.....+.|.|.
T Consensus 44 ~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~ 111 (231)
T 3ojm_B 44 GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV 111 (231)
T ss_dssp EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEEEE
Confidence 566777788877542 1269999999999999999999999987777777664
No 431
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.38 E-value=2.4e-06 Score=52.10 Aligned_cols=51 Identities=27% Similarity=0.481 Sum_probs=37.0
Q ss_pred cceEEEE--CCEEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQ--DTFLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~--~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|+| ++..+. .....++..........|.|.++..+|+|.|.|.+.+.
T Consensus 156 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 218 (256)
T 1nqb_A 156 TYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSH 218 (256)
T ss_dssp BCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred eEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 4899999 555331 00134555544556778999999999999999999874
No 432
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.38 E-value=8.7e-07 Score=46.92 Aligned_cols=37 Identities=30% Similarity=0.411 Sum_probs=28.4
Q ss_pred cEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccce
Q psy3272 69 RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRA 105 (115)
Q Consensus 69 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~ 105 (115)
++.+..++....|.|.++..+|.|.|+|.+.|.....
T Consensus 53 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 89 (106)
T 2dlt_A 53 RITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSL 89 (106)
T ss_dssp SCEEEEETTEEEEEESSCCTTTCSCEEEEEETSCCCC
T ss_pred CEEEEEeCCEEEEEECCCCcCCCEEEEEEEccCCceE
Confidence 3344444556689999999999999999999984333
No 433
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.38 E-value=5.5e-07 Score=49.19 Aligned_cols=38 Identities=24% Similarity=0.446 Sum_probs=31.4
Q ss_pred eEEEEEeccCCCCCeeeEEEeec-CccceeeEEEEEEeC
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADN-NLGRAKKYMELSELE 115 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n-~~~~~~~~~~l~v~~ 115 (115)
...|.|.+++.+|+|.|.|.+.+ +.|.....+.|.|+|
T Consensus 79 ~~sL~I~~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE 117 (123)
T 4gjt_B 79 DGSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLE 117 (123)
T ss_dssp BCCEEEESCCSSSCSEEEEEEEESSSCEEEEEEEEEC--
T ss_pred EEEEEECCCChHHCEEEEEEEEECCCCeEEeEEEEEEEE
Confidence 45799999999999999998875 577778888998875
No 434
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=2.6e-06 Score=44.73 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=43.2
Q ss_pred CCCCCeEEEEEeecCCcceeEEEEEeccc---CCcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 38 QSTDFGNYSCVADNNLGRAKKYMELSVSV---SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 38 ~~~d~G~y~C~~~~~~~~~~~~~~v~g~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...+.-...|.+...... ....-.|.+ ..++....++....|.|.++..+|+|.|+|.+.|. ...+.|.|.
T Consensus 21 ~~G~~v~l~C~~~~~~~~--v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~l~V~ 94 (103)
T 2edf_A 21 APGEDVELRCELSRAGTP--VHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEAS----KSTASLHVE 94 (103)
T ss_dssp CTTSCEEECCEESSSSCC--CCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSSC----EEEEEEEEC
T ss_pred cCCCCEEEEEEEeCCCCc--EEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEccC----CcEEEEEEe
Confidence 345556777887531111 111112211 22444445555678999999999999999999992 445556553
No 435
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.37 E-value=8.5e-07 Score=51.90 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=32.2
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCC-CCeEEEEEeecCCcceeEE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQST-DFGNYSCVADNNLGRAKKY 59 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~-d~G~y~C~~~~~~~~~~~~ 59 (115)
|.|+|+++|..+.. . ..|.|.....+ |.|.|+|.+.|..+.....
T Consensus 140 p~i~W~~~g~~l~~--~-----------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 140 VSFRWEALGNTLSS--Q-----------PNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp CEEEEEETTEEEES--S-----------SEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred eEEEEEeCCEEcCC--C-----------CeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 68999999987654 1 23555444444 8999999999988776543
No 436
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.37 E-value=1.4e-06 Score=60.30 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=64.0
Q ss_pred cceE-EE--ECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcc-eeE--EEEEeccc---------
Q psy3272 2 GMMS-WY--QDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGR-AKK--YMELSVSV--------- 66 (115)
Q Consensus 2 p~v~-W~--~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~-~~~--~~~v~g~~--------- 66 (115)
|.|. |+ ++|..+.. .....+........|.|.++...|.|.|.|.+.|..+. ... .+.|...|
T Consensus 194 p~i~~W~~~~~g~~l~~--~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~ 271 (731)
T 2v5y_A 194 AGDRLWLQGIDVRDAPL--KEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLA 271 (731)
T ss_dssp TTCEEEEEESSSCCEEE--EEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEE
T ss_pred CceeEEEecCCCccccc--cceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCccee
Confidence 5677 88 56765543 11111100112468999999999999999999998876 333 45552211
Q ss_pred ---------------------CCcEEEEE--e---------CCeEEEEEeccCCCCCeeeEEEee--cCcccee
Q psy3272 67 ---------------------SDRRLMET--R---------GNKHTLTIKNVQSTDFGNYSCVAD--NNLGRAK 106 (115)
Q Consensus 67 ---------------------~~~~~~~~--~---------~~~~~l~i~~~~~~d~G~y~C~~~--n~~~~~~ 106 (115)
...+.+.. . .....+.|.++...+.+.|+|.|. |..|...
T Consensus 272 ~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~ 345 (731)
T 2v5y_A 272 SVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGS 345 (731)
T ss_dssp EECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSSCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCC
T ss_pred ccCCceEEEEeCCcccCCCCccEEEEEEEEECCCCceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCcccc
Confidence 11111111 1 112367888888888889999999 9888643
No 437
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.36 E-value=7.1e-07 Score=47.82 Aligned_cols=29 Identities=24% Similarity=0.456 Sum_probs=24.0
Q ss_pred eEEEEEecCCCCCCeEEEEEeec-CCccee
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADN-NLGRAK 57 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~-~~~~~~ 57 (115)
...|+|.+++.+|+|.|.|.+.+ ..+...
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~ 107 (118)
T 3udw_C 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRS 107 (118)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEE
T ss_pred CcEEEEeecChHHCeEEEEEEEECCCCCcc
Confidence 56899999999999999999987 444333
No 438
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.36 E-value=3e-06 Score=44.60 Aligned_cols=42 Identities=26% Similarity=0.376 Sum_probs=31.9
Q ss_pred cEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 69 RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 69 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
++.+..++....|.|.++..+|+|.|+|.+.| ....+.|.|.
T Consensus 54 ~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~~~l~V~ 95 (103)
T 1x44_A 54 RYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQSSAKLSVD 95 (103)
T ss_dssp SEEEEEETTEEEEEEEEECTTTCSEEEEEETT----EEEEEEEEEE
T ss_pred EEEEEEcCCEEEEEECCCCcccCEEEEEEECC----CcEEEEEEEe
Confidence 44555566667899999999999999999998 3445555554
No 439
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.35 E-value=3.5e-06 Score=44.77 Aligned_cols=51 Identities=33% Similarity=0.565 Sum_probs=36.1
Q ss_pred cceEEEECC--EE---eC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--FL---IE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.|.|||.. .. +. .....++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (107)
T 1i8k_A 31 DDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDVGDYYCLQSFN 93 (107)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEeeC
Confidence 579999853 21 11 00135666554556678999999999999999999764
No 440
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.34 E-value=1.7e-06 Score=47.05 Aligned_cols=51 Identities=25% Similarity=0.513 Sum_probs=36.2
Q ss_pred cceEEEECC--EE---eC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--FL---IE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~~---~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.|.|||.. .. +. .....|+..........|+|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (120)
T 1mqk_L 31 SYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFGSYYCQHHYG 93 (120)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCEEEEEEEEeC
Confidence 579999953 21 11 00145666554556778999999999999999999864
No 441
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.33 E-value=7.3e-07 Score=47.67 Aligned_cols=41 Identities=24% Similarity=0.498 Sum_probs=33.0
Q ss_pred ceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
.+.|+|+|..+.. ......|.|.+++.+|+|.|.|.+.+..
T Consensus 43 ~~~w~k~g~~l~~----------~~~~~~l~i~~v~~~dsG~Y~C~~~~~~ 83 (108)
T 4hwn_A 43 LFSFYKDGRIVQS----------RGLSSEFQIPTASEDHSGSYWCEAATED 83 (108)
T ss_dssp EEEEEETTEEEEE----------EESCCEEEESSCCGGGCEEEEEEEECTT
T ss_pred EEEEEECCcCccC----------CCcccEEEeCccCcccCeEEEEEEEeCC
Confidence 3899999987643 1235779999999999999999998754
No 442
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=98.33 E-value=1.6e-06 Score=53.25 Aligned_cols=33 Identities=12% Similarity=0.222 Sum_probs=25.5
Q ss_pred EEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 80 TLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 80 ~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
.|.|......| +.|+|.+.+..+.......+.+
T Consensus 231 ~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 263 (267)
T 3u1s_H 231 VVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 263 (267)
T ss_dssp EEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEECchhcCC-CEEEEEEEECCCCcceEEEccc
Confidence 57788887778 9999999999877655555544
No 443
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.33 E-value=9.9e-07 Score=47.63 Aligned_cols=37 Identities=30% Similarity=0.557 Sum_probs=33.5
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.+++.+|+|.|.|.+.|..+.....+.|.|.
T Consensus 88 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 124 (126)
T 1eaj_A 88 DASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVL 124 (126)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEE
Confidence 3679999999999999999999999888888888886
No 444
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.33 E-value=4.7e-07 Score=54.08 Aligned_cols=46 Identities=17% Similarity=0.195 Sum_probs=35.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.+.|+|+|..+.. . . ........|.|.+++.+|+|.|.|.+.+..
T Consensus 135 ~~~~W~k~g~~~~~--~-~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 135 DRFSLAKEGELSLP--Q-H---QSGEHPANFSLGPVDLNVSGIYRCYGWYNR 180 (218)
T ss_dssp SEEEEEETTCSSCC--S-E---EECSSSEEEECCSCCGGGCEEEEEEEECTT
T ss_pred CEEEEEECCCcccc--c-c---cCCCccCEEEEccCCcccCEEEEEEEEcCC
Confidence 57999999986653 1 1 123456889999999999999999998753
No 445
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.32 E-value=8.6e-07 Score=58.23 Aligned_cols=50 Identities=20% Similarity=0.213 Sum_probs=41.4
Q ss_pred ccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 65 SVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 65 ~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.+.|...+. ...|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 377 ~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~ 442 (452)
T 3zyi_A 377 PPMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVS 442 (452)
T ss_dssp CTTSEEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTTCCEEEEEEEECSSCEEEEEEEEEC-
T ss_pred CCCCcEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHHHCEEEEEEEEcCCCcEEEEEEEEEE
Confidence 3888888876321 2469999999999999999999999999999988875
No 446
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.32 E-value=5.1e-06 Score=43.44 Aligned_cols=42 Identities=33% Similarity=0.370 Sum_probs=32.0
Q ss_pred cEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 69 RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 69 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
++....++....|.|.++..+|+|.|+|.| |.....+.|.|.
T Consensus 53 ~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----g~~~~~~~l~V~ 94 (100)
T 2yuv_A 53 KYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELFVR 94 (100)
T ss_dssp TEEEEEETTEEEEEEEEECTTTCCEEEEEE----TTEEEEEEEEEC
T ss_pred CEEEEecCCEEEEEEcCCCcCcCEEEEEEE----CCceEEEEEEEe
Confidence 444444555668999999999999999999 555666777764
No 447
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=98.32 E-value=1.4e-06 Score=48.33 Aligned_cols=38 Identities=29% Similarity=0.413 Sum_probs=33.9
Q ss_pred CeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 77 NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 77 ~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
....|.|.+++.+|+|.|+|.+.|..+.....+.|.|.
T Consensus 83 ~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~ 120 (139)
T 1pko_A 83 GKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVE 120 (139)
T ss_dssp TEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CeEEEEEccCCHHHCEEEEEEEEcCCCceEEEEEEEEe
Confidence 35789999999999999999999999888888888875
No 448
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.31 E-value=4.5e-06 Score=45.31 Aligned_cols=51 Identities=25% Similarity=0.498 Sum_probs=36.0
Q ss_pred cceEEEECC--E---EeC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--F---LIE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~---~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.|.|||.. . .+. .....++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 33 ~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 95 (119)
T 2e27_L 33 KKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPEDAATYYCLQYDN 95 (119)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCEEEEEEECGG
T ss_pred ceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccC
Confidence 579999853 1 111 00135666554556778999999999999999999763
No 449
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.31 E-value=2.1e-06 Score=45.67 Aligned_cols=51 Identities=37% Similarity=0.580 Sum_probs=34.1
Q ss_pred cceEEEECC--E---EeCC-------CCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--F---LIEP-------SVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~---~~~~-------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.|.|||.. . .+.. ....++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 31 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 93 (108)
T 1qfw_M 31 SFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFADYHCGQTYN 93 (108)
T ss_dssp SCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCSEEEEEECSS
T ss_pred cEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCEEEEEEEccC
Confidence 579999853 1 1110 0134454433334578999999999999999999764
No 450
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.31 E-value=2.8e-06 Score=51.60 Aligned_cols=52 Identities=31% Similarity=0.452 Sum_probs=37.0
Q ss_pred cceEEEEC--CEEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQD--TFLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~--~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.|.|||. +..+. .....++..........|.|.+++.+|+|.|.|.+.+..
T Consensus 180 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 180 RRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp CCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred eeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 68999983 22111 001356665555667789999999999999999998743
No 451
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.31 E-value=3.9e-06 Score=49.36 Aligned_cols=46 Identities=24% Similarity=0.226 Sum_probs=34.2
Q ss_pred cEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCcc---ceeeEEEEEEe
Q psy3272 69 RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG---RAKKYMELSEL 114 (115)
Q Consensus 69 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~---~~~~~~~l~v~ 114 (115)
++..........|.|.++..+|+|.|+|.+.|..+ .....+.|.|.
T Consensus 60 r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 60 HFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp TEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEE
T ss_pred cEEEEecCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEe
Confidence 44444455677899999999999999999999887 33444555553
No 452
>1xiw_B T-cell surface glycoprotein CD3 delta chain; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.30 E-value=3.2e-07 Score=46.47 Aligned_cols=50 Identities=12% Similarity=0.194 Sum_probs=30.5
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeEEEEE
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMEL 62 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~v 62 (115)
+.|+|++++..+.. .....|.+.+...++.|.|.|.+.+..+...+.|.|
T Consensus 18 ~~i~W~k~~~~i~~-----------~~~~tL~L~~~~~d~sG~Y~C~~~~~~~~~~s~LqV 67 (79)
T 1xiw_B 18 TSITWVEGTVGTLL-----------SDITRLDLGKRILDPRGIYRCNGTDIYKDKESTVQV 67 (79)
T ss_dssp SCEEEEEECCCEEE-----------GGGTEEEEEEGGGCCEEEEEEC--------CEEEEE
T ss_pred CCEEEEECCccccc-----------ccCCeEEeccCcCCCCeEEEecCCCCCCcccEEEEE
Confidence 57999999876654 124667777777789999999888766644344443
No 453
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.30 E-value=3.1e-06 Score=51.37 Aligned_cols=52 Identities=27% Similarity=0.443 Sum_probs=36.9
Q ss_pred cceEEEEC--CEEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQD--TFLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~--~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.|.|||. +..+. .....++..........|+|.+++.+|+|.|.|.+.+..
T Consensus 168 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 231 (256)
T 3umt_A 168 SNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASS 231 (256)
T ss_dssp TCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSS
T ss_pred cEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCC
Confidence 58999994 22211 001355665555667789999999999999999998743
No 454
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.30 E-value=1.8e-06 Score=45.88 Aligned_cols=46 Identities=11% Similarity=0.190 Sum_probs=33.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.+.|||++..+.. . + .........|.|.+++.+|+|.|.|.+.+.
T Consensus 33 ~~~~w~k~g~~~~~--~-~--~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~ 78 (105)
T 2vsd_A 33 AWVQLWLNGTLRFD--K-E--KDKEQDAAEFSFAVTNLEDAGTYQCRYQVS 78 (105)
T ss_dssp EEEEEEETTEEEEE--E-E--ECTTCSEEEEEEECCSGGGCEEEEEEEEEE
T ss_pred cEEEEEECCcccee--e-e--ccCCCCEEEEEECCCCHHHCeEEEEEEEcC
Confidence 35789999876532 0 0 001234678999999999999999999864
No 455
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.30 E-value=2.5e-06 Score=45.40 Aligned_cols=48 Identities=27% Similarity=0.475 Sum_probs=34.4
Q ss_pred cceEEEECC--E----EeCCCCCCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 2 GMMSWYQDT--F----LIEPSVSDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 2 p~v~W~~~~--~----~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
+.|.|||.. . .+.. ..++..... .....|+|.+++.+|+|.|.|.+.+
T Consensus 32 ~~v~W~r~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y~C~~~~ 87 (108)
T 2coq_A 32 DSTNWYRTKLGSTKEQTISI--GGRYSETVDEGSNSASLTIRDLRVEDSGTYKCKAYR 87 (108)
T ss_dssp EEEEEEEEETTCCCEEECCC--BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CEEEEEEcCCCCCcEEEEEe--CCceEEEEcCCCCEEEEEECCCCcccCEEEEEEEEe
Confidence 478999863 2 1222 456654322 3567899999999999999999976
No 456
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.30 E-value=1.3e-06 Score=51.69 Aligned_cols=62 Identities=11% Similarity=0.134 Sum_probs=39.8
Q ss_pred cceEEEE-CCEEeCCCCCCCEEEEEeC--CeEEEEEecCCCCCCeEEEEEeecCCcceeE--EEEEecc
Q psy3272 2 GMMSWYQ-DTFLIEPSVSDRRLMETRG--NKHTLTIKNVQSTDFGNYSCVADNNLGRAKK--YMELSVS 65 (115)
Q Consensus 2 p~v~W~~-~~~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~--~~~v~g~ 65 (115)
|.|+|++ ++..+.. .......... ....|.|.++..+|.|.|.|.+.+..+.... .+.|.+.
T Consensus 141 ~~v~W~~~~~~~~~~--~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 207 (222)
T 4i0k_A 141 AEVFWKDGQGVPLTG--NVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQ 207 (222)
T ss_dssp CEEEEECTTSCBCCS--EEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC-
T ss_pred CeEEEEcCCCccCCC--CcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCC
Confidence 6899999 4544433 1111111111 1245788999999999999999999888777 4555443
No 457
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.30 E-value=1.3e-06 Score=51.86 Aligned_cols=52 Identities=19% Similarity=0.401 Sum_probs=34.3
Q ss_pred CcceEEEECCEEeCCCC--CCCEEEEEe----CC-----eEEEEEecCCCCCCeEEEEEeecC
Q psy3272 1 MGMMSWYQDTFLIEPSV--SDRRLMETR----GN-----KHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~--~~~~~~~~~----~~-----~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
.|.|+|++++.++.... ..++.+... .. ...|.|.....+|.|.|+|.+.+.
T Consensus 149 ~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 149 APKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp CCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred CCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 37899999999887621 123332211 11 166888755566699999999984
No 458
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.30 E-value=7.3e-06 Score=43.74 Aligned_cols=70 Identities=17% Similarity=0.279 Sum_probs=44.7
Q ss_pred CCCCCeEEEEEeecCCcceeEEEEEeccc---CCcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 38 QSTDFGNYSCVADNNLGRAKKYMELSVSV---SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 38 ~~~d~G~y~C~~~~~~~~~~~~~~v~g~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...+.-...|.+... . .....-+|.+ ..++.+..++....|.|.++..+|.|.|+|.+ +.....+.|.|.
T Consensus 32 ~~G~~v~l~C~~~~~-p--~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----~~~~~~~~l~V~ 104 (113)
T 2edh_A 32 TEGATAVLRCELSKM-A--PVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVR 104 (113)
T ss_dssp CTTSCEEEEEEESSC-C--CCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE----TTEEEEEEEEEC
T ss_pred eCCCeEEEEEEECCC-C--cEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe----CCCCEEEEEEEe
Confidence 345566788887432 1 1122223322 23455555566678999999999999999999 555566667664
No 459
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.29 E-value=3.7e-06 Score=51.90 Aligned_cols=51 Identities=24% Similarity=0.395 Sum_probs=36.8
Q ss_pred cceEEEE--CCEEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQ--DTFLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~--~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|+| ++..+. .....++..........|+|.++..+|+|.|.|.+.+.
T Consensus 191 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 253 (282)
T 1qok_A 191 SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSS 253 (282)
T ss_dssp SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeC
Confidence 5799999 554331 00135565544556778999999999999999999864
No 460
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=98.29 E-value=4.1e-05 Score=47.62 Aligned_cols=46 Identities=13% Similarity=0.244 Sum_probs=35.1
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.|.|+++|..++. . ++.. .......|+|.++... .|.|.|.+.+.
T Consensus 41 p~i~W~~~g~~i~~--~-~~~~-~~~~~~~L~i~~~~~~-~g~Y~C~a~~~ 86 (303)
T 1i1r_A 41 NYIVWKTNHFTIPK--E-QYTI-INRTASSVTFTDIASL-NIQLTCNILTF 86 (303)
T ss_dssp GGEEEEETTEECCG--G-GCEE-EETTEEEEEECSCCCS-EEEEEEEEEET
T ss_pred hheEEEECCEECCh--h-heee-eCCcEEEEEEcCcCCC-ceEEEEecccC
Confidence 68999999998865 3 3332 2344678999999887 59999999874
No 461
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=98.29 E-value=2.4e-06 Score=45.64 Aligned_cols=51 Identities=25% Similarity=0.455 Sum_probs=35.8
Q ss_pred cceEEEECC--E-E--eC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--F-L--IE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~-~--~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.|.|||.. . + +. .....|+..........|+|.+++.+|+|.|.|.+.+.
T Consensus 35 ~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 35 GFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNE 97 (111)
T ss_dssp ECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEccCCEEEEEECCCCcccCEEEEEEEecC
Confidence 468999852 2 1 11 00135666554556678999999999999999999764
No 462
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.29 E-value=3.5e-06 Score=45.11 Aligned_cols=48 Identities=25% Similarity=0.448 Sum_probs=34.6
Q ss_pred cceEEEEC--CE----EeCCCCCCCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 2 GMMSWYQD--TF----LIEPSVSDRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 2 p~v~W~~~--~~----~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
+.|.|||. +. .+.. ..++..... .....|+|.+++.+|+|.|.|.+.+
T Consensus 32 ~~v~W~r~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 87 (111)
T 2ywz_A 32 SSTTWYRTQLGSTNEKTISI--GGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQADY 87 (111)
T ss_dssp CEEEEEEEETTCCCCEECCS--BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CEEEEEEeCCCCCceEeeEe--CCCEEEEEeCCCCEEEEEECCCChhcCEEEEEEEEc
Confidence 57999985 22 1222 456654332 3467899999999999999999986
No 463
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.29 E-value=1.4e-06 Score=46.76 Aligned_cols=25 Identities=32% Similarity=0.432 Sum_probs=22.3
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
...|+|.+++.+|+|.|.|.+.+..
T Consensus 72 ~~sL~I~~v~~~DsG~Y~C~v~~~~ 96 (116)
T 2or8_A 72 DVSLTIENSVESDSGLYCCRVEIPG 96 (116)
T ss_dssp BCCEEESSCCGGGCEEEEEEECCSS
T ss_pred eEEEEECCCCcccCEEEEEEEEcCC
Confidence 4679999999999999999998754
No 464
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=5.6e-06 Score=44.14 Aligned_cols=70 Identities=17% Similarity=0.180 Sum_probs=41.3
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEeccc---CCcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVSV---SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~~---~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
..+.-...|.+.... ......-.|.+ ..++.....+....|.|.++..+|.|.|+|.+.| ....+.|.|.
T Consensus 27 ~G~~v~L~C~~~~p~--~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n----~~~~~~l~V~ 99 (113)
T 2cpc_A 27 RLERVVLTCELCRPW--AEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD----ESASFTVTVT 99 (113)
T ss_dssp TTCCEEEEEEESCTT--CCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS----CEEEEEEEEE
T ss_pred cCCeEEEEEEecCCC--CeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec----CcEEEEEEEe
Confidence 455567788774211 11111112211 2233344444557899999999999999999999 3345555553
No 465
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.28 E-value=4.4e-06 Score=45.22 Aligned_cols=62 Identities=26% Similarity=0.405 Sum_probs=38.8
Q ss_pred ceEEEECCEEeCC-----------CCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeec-CCcceeE--EEEEecccC
Q psy3272 3 MMSWYQDTFLIEP-----------SVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADN-NLGRAKK--YMELSVSVS 67 (115)
Q Consensus 3 ~v~W~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~-~~~~~~~--~~~v~g~~~ 67 (115)
.|.|+|++..+.. ....|+.+ .....|+|.+++.+|+|.|.|.+.. ..+.... .|.|.+.|.
T Consensus 36 ~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~---~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V~~pp~ 111 (117)
T 3q0h_A 36 QVNWEQQDQLLAICNADLGWHISPSFKDRVAP---GPGLGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEVLESSV 111 (117)
T ss_dssp EEEEEETTEEEEEEETTTEEECCGGGTTTEEE---CSTTCEEECSCCGGGCEEEEEEEEEETTCCEEEEEEEEEECC--
T ss_pred EEEEEeCCEEEEEEECCCCceeCccccCcEEe---CCceEEEEeeCChhhCEEEEEEEEECCCCCeEEEEEEEEEccCc
Confidence 6899998654321 00234433 2356899999999999999999864 3344433 566654443
No 466
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.27 E-value=5.9e-06 Score=48.25 Aligned_cols=37 Identities=27% Similarity=0.397 Sum_probs=32.8
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
...|.|.++..+|.|.|+|.+.|..+.....+.|.|.
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~ 102 (202)
T 3bp6_B 66 KALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVK 102 (202)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eeEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEec
Confidence 4689999999999999999999999987778877764
No 467
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.26 E-value=2.2e-06 Score=51.93 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=28.5
Q ss_pred CCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 19 DRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 19 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
.++..........|+|.+++.+|+|.|.|.+.+..
T Consensus 196 ~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~ 230 (253)
T 3uzq_A 196 ARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEV 230 (253)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSS
T ss_pred CceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCC
Confidence 45655555667789999999999999999998754
No 468
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=5.1e-06 Score=43.97 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=42.7
Q ss_pred CCCCeEEEEEeecCCcceeEEEEEecc---cCCcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 39 STDFGNYSCVADNNLGRAKKYMELSVS---VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 39 ~~d~G~y~C~~~~~~~~~~~~~~v~g~---~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
..+.-.+.|.+............-+|. +..++....++....|.|.++..+|+|.|+|.+.|. ...+.|.|.
T Consensus 22 ~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~----~~~a~L~V~ 96 (104)
T 2eny_A 22 EGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRGL----TSKASLIVR 96 (104)
T ss_dssp SSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETTE----EEEECEEEE
T ss_pred CCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECCe----eEEEEEEEe
Confidence 445567788775322110000111221 223455555666778999999999999999998663 345556554
No 469
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.26 E-value=1.5e-06 Score=46.77 Aligned_cols=36 Identities=17% Similarity=0.103 Sum_probs=31.1
Q ss_pred EEEEEeccCCCCCeeeEEEeecCccc-eeeEEEEEEe
Q psy3272 79 HTLTIKNVQSTDFGNYSCVADNNLGR-AKKYMELSEL 114 (115)
Q Consensus 79 ~~l~i~~~~~~d~G~y~C~~~n~~~~-~~~~~~l~v~ 114 (115)
..|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|.
T Consensus 72 gSL~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V~ 108 (111)
T 2qsq_A 72 ASLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRVY 108 (111)
T ss_dssp SCEEECSCCGGGCEEEEEEEEETTSCCEEEEEEEEEE
T ss_pred CcEEEccCcccCCeEEEEEEEeCCCcEEEEEEEEEEe
Confidence 37999999999999999999998764 6667888775
No 470
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.25 E-value=2.8e-06 Score=45.67 Aligned_cols=48 Identities=19% Similarity=0.119 Sum_probs=34.7
Q ss_pred ecccCCcEEEEEeCC----------------eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 63 SVSVSDRRLMETRGN----------------KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 63 ~g~~~~~~~~~~~~~----------------~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.|.|.|.+.|++++. ...|.|.++..+|+|.|+|.+ |.....+.|.|.
T Consensus 38 ~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~----g~~~~~~~L~V~ 101 (115)
T 2cr6_A 38 SPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVT 101 (115)
T ss_dssp ESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEEE----TTEECCEEEEEE
T ss_pred cCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEEE----CCeeEEEEEEEE
Confidence 566677777776542 236999999999999999994 444555666664
No 471
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.24 E-value=2.3e-06 Score=52.06 Aligned_cols=52 Identities=29% Similarity=0.399 Sum_probs=36.8
Q ss_pred cceEEEE--CCEEeC----------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQ--DTFLIE----------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~--~~~~~~----------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.|.|+| ++..+. .....++..........|.|.++..+|+|.|.|.+.+..
T Consensus 169 ~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 169 NYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred CcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 5899999 554321 001345554444456789999999999999999998754
No 472
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.24 E-value=1.6e-05 Score=44.13 Aligned_cols=67 Identities=19% Similarity=0.155 Sum_probs=42.6
Q ss_pred cceEEEEC---CEEeCC--CCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCc-ceeE----EEEEecccCC
Q psy3272 2 GMMSWYQD---TFLIEP--SVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG-RAKK----YMELSVSVSD 68 (115)
Q Consensus 2 p~v~W~~~---~~~~~~--~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~-~~~~----~~~v~g~~~~ 68 (115)
+.+.|||. |..+.. ....++..........|+|.+++.+|+|.|.|.+.+..+ .... .|.|.+.|.+
T Consensus 47 ~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~~~~~~~~~~~fg~GT~L~V~~~p~~ 123 (134)
T 3kg5_A 47 GNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRVMGFSTL 123 (134)
T ss_dssp CCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEEEECTTTCCEEECCCEEEEEECC---
T ss_pred ceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEEEEcCCCCceEECCCEEEEEecCCCH
Confidence 46899987 332210 114667665555678999999999999999999976521 1111 5666665544
No 473
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.23 E-value=7.9e-07 Score=47.09 Aligned_cols=27 Identities=33% Similarity=0.377 Sum_probs=23.2
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCCcc
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNLGR 55 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~~~ 55 (115)
...|+|.+++.+|+|.|.|.+.+..+.
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~ 97 (109)
T 2oyp_A 71 DVSLIIKNVTLDDHGTYCCRIQFPGLM 97 (109)
T ss_dssp BCCEEECSCCGGGCEEEEEEECCSSTT
T ss_pred cEeEEEccCCChhCeEEEEEEEcCCcc
Confidence 367999999999999999999876533
No 474
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.23 E-value=2.1e-07 Score=54.87 Aligned_cols=52 Identities=12% Similarity=0.163 Sum_probs=35.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEE-e----CCeEEEEEecCCCCCCeEEEEEeecCCcc
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMET-R----GNKHTLTIKNVQSTDFGNYSCVADNNLGR 55 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~-~----~~~~~l~i~~~~~~d~G~y~C~~~~~~~~ 55 (115)
|.|+|+|+|.++.. ........ . .....|.|.++..+|.|.|+|.+.+....
T Consensus 145 ~~v~W~k~g~~~~~--~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 145 ATVTWKANGATIND--GVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp CEEEEEETTEEECS--SCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred cEEEEEECCeEcCC--CeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 58999999998864 21100000 0 01356889999999999999999987644
No 475
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.23 E-value=6.8e-06 Score=44.99 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=28.7
Q ss_pred CCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 18 SDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 18 ~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
..++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 63 ~~r~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~ 97 (126)
T 4ffy_L 63 PARFSGSGSETDFTLTIDSVETDDAATYYCQQNNE 97 (126)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred CCcEEEecCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 45666655567789999999999999999999764
No 476
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.23 E-value=7.4e-06 Score=43.78 Aligned_cols=51 Identities=37% Similarity=0.579 Sum_probs=36.0
Q ss_pred cceEEEECC--E---EeC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--F---LIE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~---~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.|.|||.. . .+. .....++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 34 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 34 TAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSS 96 (111)
T ss_dssp TCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSS
T ss_pred CCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCHHHCEEEEEEEecC
Confidence 579999853 1 121 01135666554556678999999999999999999764
No 477
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.23 E-value=1.8e-06 Score=46.03 Aligned_cols=51 Identities=25% Similarity=0.419 Sum_probs=34.3
Q ss_pred cceEEEECCEEeC----------CCCCCCEEEEE--eCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDTFLIE----------PSVSDRRLMET--RGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~~~~~----------~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.+.|||....+. .....|+.... ......|+|.+++.+|+|.|.|.+.+.
T Consensus 32 ~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 94 (109)
T 1pew_A 32 NYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDA 94 (109)
T ss_dssp SCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred ccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEEEEEEEEeC
Confidence 5789999762110 00135565542 334678999999999999999999764
No 478
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.22 E-value=2.8e-06 Score=45.57 Aligned_cols=26 Identities=35% Similarity=0.551 Sum_probs=23.0
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
....|+|.+++.+|+|.|.|.+.+..
T Consensus 69 ~~~~L~I~~v~~~DsG~Y~C~~~n~~ 94 (113)
T 1h5b_A 69 RYSTLHIRDAQLEDSGTYFCAAEASS 94 (113)
T ss_dssp SEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred CEEEEEECCCChhhCEEEEEEEecCC
Confidence 45689999999999999999998754
No 479
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.21 E-value=6.8e-06 Score=43.18 Aligned_cols=31 Identities=23% Similarity=0.511 Sum_probs=25.8
Q ss_pred EEeCCeEEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 73 ETRGNKHTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 73 ~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
...+....|.|.++..+|+|.|+|.+.|..+
T Consensus 59 ~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 89 (104)
T 2e6p_A 59 KMDGRKHRLILPEAKVQDSGEFECRTEGVSA 89 (104)
T ss_dssp EEETTEEEEEESSCCTTTCEEEEEECSSCCC
T ss_pred EeCCCEEEEEECCCChhhCEEEEEEECCceE
Confidence 3344556899999999999999999999854
No 480
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.21 E-value=1.6e-06 Score=50.36 Aligned_cols=45 Identities=13% Similarity=0.185 Sum_probs=32.5
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.+.|++++.++.. . ....|.+.. .+|+|.|+|.+.|..+...+
T Consensus 129 ~p~i~W~~~~~~l~~--~---------~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~ 173 (180)
T 2dru_A 129 DVELKLYQGKEHLRS--L---------RQKTMSYQW--TNLRAPFKCKAVNRVSQESE 173 (180)
T ss_dssp TCEEEEEETTEEEEE--E---------SSSEEEEEC--SCCSSCEEEEEEETTEEEEE
T ss_pred CCEEEEEECCeECcC--C---------CCCEEEEEE--hhcCccEEEEEecCcCcccc
Confidence 378999999987752 1 233455533 78999999999998776654
No 481
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=98.21 E-value=2.3e-06 Score=45.76 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=32.4
Q ss_pred eEEEEEeccCCCCCeeeEEEeec-CccceeeEEEEEEe
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADN-NLGRAKKYMELSEL 114 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n-~~~~~~~~~~l~v~ 114 (115)
...|.|.+++.+|+|.|.|.+.+ ..+.....+.|.|.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~ 115 (118)
T 3udw_C 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL 115 (118)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcEEEEeecChHHCeEEEEEEEECCCCCccceEEEEEE
Confidence 56899999999999999999999 77777778888775
No 482
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.20 E-value=8.6e-06 Score=47.99 Aligned_cols=35 Identities=26% Similarity=0.379 Sum_probs=28.7
Q ss_pred cEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 69 RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 69 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
++..........|.|.+++.+|+|.|.|.+.|..+
T Consensus 65 r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 99 (218)
T 3s96_B 65 RFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIK 99 (218)
T ss_dssp TEEEEEETTEEEEEESSCCGGGCEEEEEEEEEEET
T ss_pred ceEEecCCceEEEEEccCCcccCEEEEEEEecCCC
Confidence 44444455667899999999999999999999876
No 483
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.19 E-value=9.6e-06 Score=43.51 Aligned_cols=51 Identities=31% Similarity=0.510 Sum_probs=35.9
Q ss_pred cceEEEECC--E---EeC-------CCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDT--F---LIE-------PSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~--~---~~~-------~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
+.|.|||.. . .+. .....++..........|+|.+++.+|+|.|.|.+.+.
T Consensus 37 ~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 37 NYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYS 99 (114)
T ss_dssp ECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSS
T ss_pred ccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCCcccCEEEEEEEeeC
Confidence 579999853 1 111 01135666554556678999999999999999999764
No 484
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.19 E-value=1.7e-06 Score=47.62 Aligned_cols=25 Identities=28% Similarity=0.396 Sum_probs=22.1
Q ss_pred eEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 29 KHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 29 ~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
...|.|.+++.+|+|.|.|.+.+..
T Consensus 91 ~~sL~I~~v~~~D~G~Y~C~v~~~~ 115 (135)
T 1xt5_A 91 APTLRLTHVHPQDGGRYWCQVAQWS 115 (135)
T ss_dssp SCCEEECSCCGGGCEEEEEEEECSS
T ss_pred CCeEEECCCChhhCcEEEEEEEcCC
Confidence 4679999999999999999998753
No 485
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.17 E-value=9.1e-06 Score=43.02 Aligned_cols=72 Identities=22% Similarity=0.170 Sum_probs=42.9
Q ss_pred CCCCCeEEEEEeecCCcceeEEEEEeccc---C-CcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 38 QSTDFGNYSCVADNNLGRAKKYMELSVSV---S-DRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 38 ~~~d~G~y~C~~~~~~~~~~~~~~v~g~~---~-~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
...+.-.+.|.+...... ....-+|.+ . .++....++....|.|.++..+|+|.|+|.+.+ ....+.|.|
T Consensus 29 ~~G~~v~L~C~~~~p~~~--v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~----~~~~~~l~V 102 (104)
T 1pd6_A 29 SKGHKIRLTVELADHDAE--VKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGG----EKCSTELFV 102 (104)
T ss_dssp ETTSCEEEEEECSSSSSC--CEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEETT----EEECCEEEE
T ss_pred ecCCCEEEEEEEcCCCCE--EEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEECC----CcEEEEEEE
Confidence 345566778887322111 111112211 1 344455556667899999999999999999954 334555666
Q ss_pred eC
Q psy3272 114 LE 115 (115)
Q Consensus 114 ~~ 115 (115)
.+
T Consensus 103 ~e 104 (104)
T 1pd6_A 103 KE 104 (104)
T ss_dssp EC
T ss_pred eC
Confidence 43
No 486
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.17 E-value=6.2e-06 Score=45.69 Aligned_cols=66 Identities=21% Similarity=0.360 Sum_probs=42.6
Q ss_pred CCCCCCeEEEEEeecCCcceeEEEEEecc-------cCCcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 37 VQSTDFGNYSCVADNNLGRAKKYMELSVS-------VSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 37 ~~~~d~G~y~C~~~~~~~~~~~~~~v~g~-------~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
+...+.-...|.+... ......-+-.|. ...++....++....|.|.++..+|+|.|.|.+.|..|
T Consensus 29 v~~G~~v~L~C~~~~~-~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a~n~~g 101 (133)
T 3khq_A 29 KKRSSMVKFHCYTNHS-GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQKCDSA 101 (133)
T ss_dssp ECTTCCEEEEEEESSS-SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEESSCC-
T ss_pred EeCCCeEEEEEEeCCC-CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEEEeCCC
Confidence 3456667778887654 111111111121 23456555666778899999999999999999999865
No 487
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.16 E-value=3.2e-06 Score=44.71 Aligned_cols=36 Identities=33% Similarity=0.366 Sum_probs=29.6
Q ss_pred eEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 78 KHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 78 ~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
...|.|.+++.+|+|.|.|.+.+..+.....+.|.|
T Consensus 71 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~l~V 106 (109)
T 2oyp_A 71 DVSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLELKL 106 (109)
T ss_dssp BCCEEECSCCGGGCEEEEEEECCSSTTCCEEEEEEE
T ss_pred cEeEEEccCCChhCeEEEEEEEcCCcccceEEEEEE
Confidence 457999999999999999999998766555555554
No 488
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.16 E-value=6.1e-06 Score=44.12 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=36.1
Q ss_pred CcEEEEE--eCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEEe
Q psy3272 68 DRRLMET--RGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSEL 114 (115)
Q Consensus 68 ~~~~~~~--~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v~ 114 (115)
.++.+.. ......|.|.++..+|+|.|.|.+.+........+.|.|.
T Consensus 61 ~R~~~~~~~~~~~~sL~I~~~~~~DsG~Y~C~v~~~~~~~~~~v~L~V~ 109 (113)
T 1zox_A 61 NRVSIRDNQRDFIFTVTMEDLRMSDAGIYWCGITKGGLDPMFKVTVNIG 109 (113)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCSSSCCEEEEEEEEE
T ss_pred CCEEEEECCcCCEEEEEEccCCHHHCEEEEEeeEcCCCCccEEEEEEEE
Confidence 3444443 2346789999999999999999999986666677888775
No 489
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.16 E-value=3e-06 Score=51.50 Aligned_cols=57 Identities=11% Similarity=0.087 Sum_probs=39.7
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC-----cceeEEEEEec
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL-----GRAKKYMELSV 64 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~-----~~~~~~~~v~g 64 (115)
+.+.|+|+|..+.. ..........|.|.+++.+|+|.|.|.+.+.. ......|.|.|
T Consensus 130 ~~~~w~k~g~~~~~------~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 130 SMFLLLKEGRSSHV------QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp SEEEEEECSSSCEE------EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred CEEEEEECCCccCc------cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 57899999875542 11123457889999999999999999998753 11122666765
No 490
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.15 E-value=1.5e-06 Score=50.09 Aligned_cols=45 Identities=13% Similarity=0.187 Sum_probs=32.0
Q ss_pred CcceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.++|++++..+.. ... ..|.+. ...|.|.|+|.+.|..+....
T Consensus 119 ~p~i~W~~~~~~l~~--~~~---------~~l~~~--~~~~~g~Y~C~a~N~~~~~~~ 163 (171)
T 1ccz_A 119 DVELKLYQGKEHLRS--LRQ---------KTMSYQ--WTNLRAPFKCKAVNRVSQESE 163 (171)
T ss_dssp SCEEEEEETTEEEEE--ESS---------SEEEEE--CSCCSSCEEEEEEETTEEEEE
T ss_pred CcEEEEEECCEECcC--Ccc---------eEEEEe--ccCCCceEEEEEEcccCcccc
Confidence 378999999988764 221 223333 367899999999998876654
No 491
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.15 E-value=1.9e-05 Score=46.42 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=29.4
Q ss_pred CcEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCcc
Q psy3272 68 DRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLG 103 (115)
Q Consensus 68 ~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~ 103 (115)
.++.....+....|.|.++..+|+|.|+|.+.|..+
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 95 (213)
T 3nl4_L 60 SRFKGSGSGTDFTLTISDLECADAATYYCQSTYENP 95 (213)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSST
T ss_pred ccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCc
Confidence 345445555667899999999999999999999776
No 492
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.14 E-value=6.5e-06 Score=48.40 Aligned_cols=50 Identities=12% Similarity=0.155 Sum_probs=34.5
Q ss_pred ceEEEECCEEeCCCCCCCEEEE--EeC-----CeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 3 MMSWYQDTFLIEPSVSDRRLME--TRG-----NKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 3 ~v~W~~~~~~~~~~~~~~~~~~--~~~-----~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
.|+|+|+|.++.. ....... ... ....|.|..+..+|.|.|+|.+.+...
T Consensus 144 ~v~W~k~g~~~~~--~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 144 SVKWKIDGTERRD--GVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp EEEEEETTEECCT--TEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred EEEEEeCCccCCC--CceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 7999999998765 2000000 000 124799999999999999999998654
No 493
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.14 E-value=8.2e-06 Score=43.27 Aligned_cols=54 Identities=19% Similarity=0.267 Sum_probs=37.9
Q ss_pred CcceEEEECC----EEeCCCCCCCEEEE-EeC--CeEEEEEecCCCCCCeEEEEEeecCCcceeE
Q psy3272 1 MGMMSWYQDT----FLIEPSVSDRRLME-TRG--NKHTLTIKNVQSTDFGNYSCVADNNLGRAKK 58 (115)
Q Consensus 1 ~p~v~W~~~~----~~~~~~~~~~~~~~-~~~--~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~ 58 (115)
.|.|+|-|-+ .+|+. +.+.- ... .-..|.+..+.+.|+|.|+|.+....+...+
T Consensus 41 rP~VtWcKln~~~c~~L~~----~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg~ieS 101 (120)
T 2aw2_A 41 RPHVTWCKLNGTTCVKLED----RQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIES 101 (120)
T ss_dssp CCEEEEEEECSSCEEECCS----SCEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCceEEEecCCceEEECcc----ccccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCCcEEe
Confidence 3899999844 45554 22211 111 1347899999999999999999988877766
No 494
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.13 E-value=2.6e-06 Score=50.11 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=32.8
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEeCCeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
|.|+|++++..+.. . . ......|.|..+..+|.|.|+|.+.+..
T Consensus 157 p~v~W~~~~~~~~~--~-~-----~~~~~~L~i~~~~~~~~g~Y~C~a~n~~ 200 (214)
T 2zg1_A 157 LTFSWTGNALSPLD--P-E-----TTRSSELTLTPRPEDHGTNLTCQMKRQG 200 (214)
T ss_dssp CEEEEESSTTSSSC--S-S-----CCCSSEEEECCCTTCCSCEEEEEEECC-
T ss_pred ceEEEeCCCCccCC--C-C-----ceeEEEEEEecccHHcCcEEEEEEEeCC
Confidence 68999999864332 1 1 1245678999998899999999999864
No 495
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.12 E-value=3.1e-06 Score=49.66 Aligned_cols=47 Identities=11% Similarity=0.066 Sum_probs=31.4
Q ss_pred cceEEEECCEEeCCCCCCCEEEEEe-CCeEEEEEecCCCCCCeEEEEEeecC
Q psy3272 2 GMMSWYQDTFLIEPSVSDRRLMETR-GNKHTLTIKNVQSTDFGNYSCVADNN 52 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~y~C~~~~~ 52 (115)
|.+.|+|+|..+.. ......... .....|.|.+++ |+|.|.|.+.+.
T Consensus 136 ~~~~w~k~g~~~~~--~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 136 DMYHLSREGEAHER--RLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp SEEEEEETTCSSCE--EEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred ceEEEEECCcccCc--ccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 57899999876543 111011011 125789999998 999999999754
No 496
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.12 E-value=8.6e-06 Score=49.13 Aligned_cols=33 Identities=12% Similarity=0.308 Sum_probs=25.5
Q ss_pred CCEEEEEe--CCeEEEEEecCCCCCCeEEEEEeec
Q psy3272 19 DRRLMETR--GNKHTLTIKNVQSTDFGNYSCVADN 51 (115)
Q Consensus 19 ~~~~~~~~--~~~~~l~i~~~~~~d~G~y~C~~~~ 51 (115)
.++.+... .....|+|.+++.+|+|.|.|.+.+
T Consensus 197 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 197 GKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp TTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 45554322 3456899999999999999999986
No 497
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.12 E-value=1.6e-05 Score=41.95 Aligned_cols=41 Identities=24% Similarity=0.523 Sum_probs=30.3
Q ss_pred cEEEEEeCCeEEEEEeccCCCCCeeeEEEeecCccceeeEEEEEE
Q psy3272 69 RRLMETRGNKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYMELSE 113 (115)
Q Consensus 69 ~~~~~~~~~~~~l~i~~~~~~d~G~y~C~~~n~~~~~~~~~~l~v 113 (115)
++....++....|.|.++..+|+|.|+|.+.|. ...+.|.|
T Consensus 52 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~l~V 92 (108)
T 2dm7_A 52 RYSLKQDGTRCELQIHDLSVADAGEYSCMCGQE----RTSATLTV 92 (108)
T ss_dssp SCEEEEETTEEEEEESSCCTTTCSEEEEEETTE----EEEEECEE
T ss_pred CEEEEecCCEEEEEECCCCcccCEEEEEEEcCC----EEEEEEEE
Confidence 444555666678999999999999999999653 34444554
No 498
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.12 E-value=4.7e-06 Score=50.64 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=28.3
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCCcceeEEEE
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNLGRAKKYME 61 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~~~~~~~~~ 61 (115)
....|.|.++..+|+|.|.|.+.+..+.....+.
T Consensus 199 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 232 (268)
T 3mj6_A 199 NDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIV 232 (268)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CeEEEEECcCChhhCeEEEEEEEcCCceEEEEEE
Confidence 4568999999999999999999998777666433
No 499
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.12 E-value=5.1e-06 Score=44.22 Aligned_cols=26 Identities=31% Similarity=0.358 Sum_probs=22.8
Q ss_pred CeEEEEEecCCCCCCeEEEEEeecCC
Q psy3272 28 NKHTLTIKNVQSTDFGNYSCVADNNL 53 (115)
Q Consensus 28 ~~~~l~i~~~~~~d~G~y~C~~~~~~ 53 (115)
....|+|.+++.+|+|.|.|.+.+..
T Consensus 71 ~~~sL~I~~v~~~DsG~Y~C~v~~~~ 96 (110)
T 2ptt_A 71 NNGALHISNVRKEDKGTYYMRVLRET 96 (110)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEESSS
T ss_pred CCccEEECCCCcccCeEEEEEEEcCC
Confidence 45689999999999999999997654
No 500
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.11 E-value=1.1e-05 Score=48.07 Aligned_cols=51 Identities=16% Similarity=0.193 Sum_probs=34.9
Q ss_pred cceEEEECCEEeCCCCCC-C-EEEEE-----eCCeEEEEEecCCCCCCeEEEEEeecCCc
Q psy3272 2 GMMSWYQDTFLIEPSVSD-R-RLMET-----RGNKHTLTIKNVQSTDFGNYSCVADNNLG 54 (115)
Q Consensus 2 p~v~W~~~~~~~~~~~~~-~-~~~~~-----~~~~~~l~i~~~~~~d~G~y~C~~~~~~~ 54 (115)
|.|+|+|+|..+.. .. . ..... ......|.|.....+|.|.|+|.+.+...
T Consensus 167 ~~v~W~k~g~~~~~--~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 224 (237)
T 3sob_L 167 AKVQWKVDNALQSG--NSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 224 (237)
T ss_dssp CEEEEEETTEECCS--SEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred eEEEEEECCCCCCC--ceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCC
Confidence 58999999998764 11 0 00000 00145688999999999999999998754
Done!