Your job contains 1 sequence.
>psy3274
MKARHIYICEYHKCLIQSVRNKRRRKDSEDDSNENDESPDVDLFQLQVNTLRRYKKYFKV
TSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQKNGNTGENT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3274
(115 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-5287 - symbol:sap30l "sap30-like" sp... 336 1.8e-30 1
UNIPROTKB|Q9HAJ7 - symbol:SAP30L "Histone deacetylase com... 335 2.3e-30 1
MGI|MGI:1354709 - symbol:Sap30l "SAP30-like" species:1009... 335 2.3e-30 1
UNIPROTKB|E1C1G4 - symbol:SAP30 "Uncharacterized protein"... 323 4.4e-29 1
UNIPROTKB|E2QY22 - symbol:SAP30 "Uncharacterized protein"... 323 4.4e-29 1
UNIPROTKB|Q29IK8 - symbol:Sap30 "Histone deacetylase comp... 323 4.4e-29 1
UNIPROTKB|I3LU53 - symbol:SAP30 "Uncharacterized protein"... 322 5.6e-29 1
UNIPROTKB|E1B806 - symbol:SAP30 "Uncharacterized protein"... 321 7.1e-29 1
UNIPROTKB|O75446 - symbol:SAP30 "Histone deacetylase comp... 321 7.1e-29 1
FB|FBgn0030788 - symbol:Sap30 "SIN3-associated polypeptid... 317 1.9e-28 1
MGI|MGI:1929129 - symbol:Sap30 "sin3 associated polypepti... 316 2.4e-28 1
>ZFIN|ZDB-GENE-030131-5287 [details] [associations]
symbol:sap30l "sap30-like" species:7955 "Danio
rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR025718 Pfam:PF13867 ZFIN:ZDB-GENE-030131-5287
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0006351 eggNOG:NOG81414 GeneTree:ENSGT00390000006633
OMA:LTYFIYM InterPro:IPR024145 InterPro:IPR025717 PANTHER:PTHR13286
Pfam:PF13866 HOGENOM:HOG000007811 HOVERGEN:HBG057907
OrthoDB:EOG48PMMK EMBL:BC066447 IPI:IPI00490024 RefSeq:NP_999868.1
UniGene:Dr.75929 STRING:Q6NYV5 PRIDE:Q6NYV5
Ensembl:ENSDART00000029763 GeneID:327079 KEGG:dre:327079 CTD:79685
NextBio:20809871 Bgee:Q6NYV5 Uniprot:Q6NYV5
Length = 178
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 63/111 (56%), Positives = 85/111 (76%)
Query: 4 RHIYICEYHKCLIQSVRNKRRRKXXXXXXXX---XXXXPDVDLFQLQVNTLRRYKKYFKV 60
RH+YIC++HK IQSVRNKR+RK P+VDLFQLQVNTLRRYK+++K+
Sbjct: 64 RHLYICDFHKNFIQSVRNKRKRKTSDDGGESPDHEVEVPEVDLFQLQVNTLRRYKRHYKI 123
Query: 61 TSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQKNGNT 111
+RPGLNKAQLAET+ +HF+ IPV EK+ L++F Y VKS+ ++LDQK+ ++
Sbjct: 124 QTRPGLNKAQLAETVSRHFRNIPVNEKETLTYFIYMVKSSKSRLDQKSDSS 174
>UNIPROTKB|Q9HAJ7 [details] [associations]
symbol:SAP30L "Histone deacetylase complex subunit SAP30L"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR025718
Pfam:PF13867 GO:GO:0005730 GO:GO:0006355 EMBL:CH471062
GO:GO:0046872 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG81414
OMA:LTYFIYM InterPro:IPR024145 InterPro:IPR025717 PANTHER:PTHR13286
Pfam:PF13866 HOGENOM:HOG000007811 HOVERGEN:HBG057907
OrthoDB:EOG48PMMK CTD:79685 EMBL:AY341060 EMBL:AY846876
EMBL:AK021588 EMBL:BC009829 IPI:IPI00002831 RefSeq:NP_001124534.1
RefSeq:NP_001124535.1 RefSeq:NP_078908.1 UniGene:Hs.592566
ProteinModelPortal:Q9HAJ7 SMR:Q9HAJ7 IntAct:Q9HAJ7 STRING:Q9HAJ7
PhosphoSite:Q9HAJ7 DMDM:74734226 PaxDb:Q9HAJ7 PRIDE:Q9HAJ7
DNASU:79685 Ensembl:ENST00000297109 GeneID:79685 KEGG:hsa:79685
UCSC:uc003lvk.3 GeneCards:GC05P153805 HGNC:HGNC:25663 MIM:610398
neXtProt:NX_Q9HAJ7 PharmGKB:PA144596386 InParanoid:Q9HAJ7
PhylomeDB:Q9HAJ7 ChiTaRS:SAP30L GenomeRNAi:79685 NextBio:68948
ArrayExpress:Q9HAJ7 Bgee:Q9HAJ7 CleanEx:HS_SAP30L
Genevestigator:Q9HAJ7 Uniprot:Q9HAJ7
Length = 183
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 63/108 (58%), Positives = 82/108 (75%)
Query: 4 RHIYICEYHKCLIQSVRNKRRRKXXXXXXXX---XXXXPDVDLFQLQVNTLRRYKKYFKV 60
RH+YIC++HK IQSVRNKR+RK P+VDLFQLQVNTLRRYK+++K+
Sbjct: 69 RHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLRRYKRHYKL 128
Query: 61 TSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQKN 108
+RPG NKAQLAET+ +HF+ IPV EK+ L++F Y VKSN ++LDQK+
Sbjct: 129 QTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKS 176
>MGI|MGI:1354709 [details] [associations]
symbol:Sap30l "SAP30-like" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR025718 Pfam:PF13867
MGI:MGI:1354709 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006351 eggNOG:NOG81414
GeneTree:ENSGT00390000006633 OMA:LTYFIYM InterPro:IPR024145
InterPro:IPR025717 PANTHER:PTHR13286 Pfam:PF13866
HOGENOM:HOG000007811 HOVERGEN:HBG057907 OrthoDB:EOG48PMMK CTD:79685
ChiTaRS:SAP30L EMBL:AL732587 EMBL:BC051686 EMBL:BC094930
EMBL:BC117029 EMBL:BC117031 EMBL:AK010234 IPI:IPI00138118
RefSeq:NP_001074637.1 UniGene:Mm.340083 ProteinModelPortal:Q5SQF8
SMR:Q5SQF8 STRING:Q5SQF8 PhosphoSite:Q5SQF8 PaxDb:Q5SQF8
PRIDE:Q5SQF8 Ensembl:ENSMUST00000020826 GeneID:50724 KEGG:mmu:50724
UCSC:uc007jae.1 InParanoid:Q5SQF8 NextBio:307585 Bgee:Q5SQF8
CleanEx:MM_SAP30L Genevestigator:Q5SQF8 Uniprot:Q5SQF8
Length = 182
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 63/108 (58%), Positives = 82/108 (75%)
Query: 4 RHIYICEYHKCLIQSVRNKRRRKXXXXXXXX---XXXXPDVDLFQLQVNTLRRYKKYFKV 60
RH+YIC++HK IQSVRNKR+RK P+VDLFQLQVNTLRRYK+++K+
Sbjct: 68 RHLYICDFHKNFIQSVRNKRKRKASDDGGDSPEHDADIPEVDLFQLQVNTLRRYKRHYKL 127
Query: 61 TSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQKN 108
+RPG NKAQLAET+ +HF+ IPV EK+ L++F Y VKSN ++LDQK+
Sbjct: 128 QTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNRSRLDQKS 175
>UNIPROTKB|E1C1G4 [details] [associations]
symbol:SAP30 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] InterPro:IPR025718 Pfam:PF13867
GO:GO:0003714 GO:GO:0000122 GO:GO:0000118
GeneTree:ENSGT00390000006633 InterPro:IPR024145 InterPro:IPR025717
PANTHER:PTHR13286 Pfam:PF13866 OMA:KIDSGVH EMBL:AADN02008953
IPI:IPI00583084 Ensembl:ENSGALT00000017488 NextBio:20825178
Uniprot:E1C1G4
Length = 214
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 63/108 (58%), Positives = 81/108 (75%)
Query: 3 ARHIYICEYHKCLIQSVRNKRRRKXXXXXXXX---XXXXPDVDLFQLQVNTLRRYKKYFK 59
ARH+YIC++HK LIQSVRN+R+RK P+VDL+QLQVNTLRRYK++FK
Sbjct: 101 ARHLYICDFHKNLIQSVRNRRKRKGSDDDGDSPVQDIDTPEVDLYQLQVNTLRRYKRHFK 160
Query: 60 VTSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQK 107
+ +RPGLNKAQL E + HF+TIPV EKD L++F Y+VK++ NK D K
Sbjct: 161 LQTRPGLNKAQLVEIIGCHFRTIPVNEKDTLAYFIYSVKNDKNKPDLK 208
>UNIPROTKB|E2QY22 [details] [associations]
symbol:SAP30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR025718 Pfam:PF13867
GO:GO:0003714 GO:GO:0000122 GO:GO:0000118 CTD:8819
GeneTree:ENSGT00390000006633 InterPro:IPR024145 InterPro:IPR025717
PANTHER:PTHR13286 Pfam:PF13866 OMA:KIDSGVH EMBL:AAEX03014309
RefSeq:XP_849083.1 Ensembl:ENSCAFT00000012542 GeneID:607359
KEGG:cfa:607359 NextBio:20893089 Uniprot:E2QY22
Length = 220
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 63/109 (57%), Positives = 82/109 (75%)
Query: 3 ARHIYICEYHKCLIQSVRNKRRRKXXXXXXXXX----XXXPDVDLFQLQVNTLRRYKKYF 58
ARH+YIC+YHK LIQSVRN+R+RK P+VDL+QLQVNTLRRYK++F
Sbjct: 106 ARHLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRHF 165
Query: 59 KVTSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQK 107
K+++RPGLNKAQL E + HF++IPV EKD L++F Y+VK++ NK D K
Sbjct: 166 KLSTRPGLNKAQLVEIVGCHFRSIPVNEKDTLTYFIYSVKNDKNKSDLK 214
>UNIPROTKB|Q29IK8 [details] [associations]
symbol:Sap30 "Histone deacetylase complex subunit SAP30
homolog" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=ISS]
InterPro:IPR025718 Pfam:PF13867 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006351 GO:GO:0010389 EMBL:CH379063
GO:GO:0000118 eggNOG:NOG81414 OMA:LTYFIYM OrthoDB:EOG4XSJ66
InterPro:IPR024145 InterPro:IPR025717 PANTHER:PTHR13286
Pfam:PF13866 RefSeq:XP_001355586.1 GeneID:4815625
KEGG:dpo:Dpse_GA18408 FlyBase:FBgn0078410 InParanoid:Q29IK8
Uniprot:Q29IK8
Length = 173
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 64/115 (55%), Positives = 83/115 (72%)
Query: 3 ARHIYICEYHKCLIQSVRNKRRRKXXXXXXXXXXXXPDV--DLFQLQVNTLRRYKKYFKV 60
A+HIYIC++HK IQSVR KRRRK DL+QL V+TLRRYK++FKV
Sbjct: 59 AQHIYICDHHKERIQSVRTKRRRKDSEDDSNETDTDLHEFPDLYQLSVSTLRRYKRHFKV 118
Query: 61 TSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQKNGNTGENT 115
+R G+ +AQLA+T++KHFKTIP+ EK++++FF Y VK TNKLDQKNG G +T
Sbjct: 119 QTRQGMKRAQLADTIMKHFKTIPIKEKEIITFFVYMVKMGTNKLDQKNG-IGNDT 172
>UNIPROTKB|I3LU53 [details] [associations]
symbol:SAP30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR025718 Pfam:PF13867
GO:GO:0003714 GO:GO:0000122 GO:GO:0000118
GeneTree:ENSGT00390000006633 InterPro:IPR024145 InterPro:IPR025717
PANTHER:PTHR13286 Pfam:PF13866 Ensembl:ENSSSCT00000026252
OMA:QDIDAPE Uniprot:I3LU53
Length = 124
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 63/110 (57%), Positives = 82/110 (74%)
Query: 2 KARHIYICEYHKCLIQSVRNKRRRKXXXXXXXXX----XXXPDVDLFQLQVNTLRRYKKY 57
+ARH+YIC+YHK LIQSVRN+R+RK P+VDL+QLQVNTLRRYK++
Sbjct: 9 QARHLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRH 68
Query: 58 FKVTSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQK 107
FK+ +RPGLNKAQL E + HF++IPV EKD L++F Y+VK++ NK D K
Sbjct: 69 FKLPTRPGLNKAQLVEIVGCHFRSIPVNEKDTLTYFIYSVKNDKNKSDLK 118
>UNIPROTKB|E1B806 [details] [associations]
symbol:SAP30 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
deacetylase complex" evidence=IEA] InterPro:IPR025718 Pfam:PF13867
GO:GO:0003714 GO:GO:0000122 GO:GO:0000118 CTD:8819
GeneTree:ENSGT00390000006633 InterPro:IPR024145 InterPro:IPR025717
PANTHER:PTHR13286 Pfam:PF13866 OMA:KIDSGVH EMBL:DAAA02021871
IPI:IPI00687862 RefSeq:NP_001178053.1 UniGene:Bt.36576
Ensembl:ENSBTAT00000020692 GeneID:781150 KEGG:bta:781150
NextBio:20924647 Uniprot:E1B806
Length = 220
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 63/109 (57%), Positives = 81/109 (74%)
Query: 3 ARHIYICEYHKCLIQSVRNKRRRKXXXXXXXXX----XXXPDVDLFQLQVNTLRRYKKYF 58
ARH+YIC+YHK LIQSVRN+R+RK P+VDL+QLQVNTLRRYK++F
Sbjct: 106 ARHLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRHF 165
Query: 59 KVTSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQK 107
K+ +RPGLNKAQL E + HF++IPV EKD L++F Y+VK++ NK D K
Sbjct: 166 KLPTRPGLNKAQLVEIVGCHFRSIPVNEKDTLTYFIYSVKNDKNKSDLK 214
>UNIPROTKB|O75446 [details] [associations]
symbol:SAP30 "Histone deacetylase complex subunit SAP30"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR025718 Pfam:PF13867 EMBL:AF055993
GO:GO:0003714 Pathway_Interaction_DB:telomerasepathway
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
GO:GO:0000122 EMBL:CH471056
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000118 CTD:8819
eggNOG:NOG81414 InterPro:IPR024145 InterPro:IPR025717
PANTHER:PTHR13286 Pfam:PF13866 EMBL:BC016757 IPI:IPI00022019
RefSeq:NP_003855.1 UniGene:Hs.591715 PDB:2KDP PDBsum:2KDP
ProteinModelPortal:O75446 SMR:O75446 IntAct:O75446 STRING:O75446
PhosphoSite:O75446 PaxDb:O75446 PeptideAtlas:O75446 PRIDE:O75446
DNASU:8819 Ensembl:ENST00000296504 GeneID:8819 KEGG:hsa:8819
UCSC:uc003itd.3 GeneCards:GC04P174292 HGNC:HGNC:10532 MIM:603378
neXtProt:NX_O75446 PharmGKB:PA34941 HOGENOM:HOG000007811
HOVERGEN:HBG057907 InParanoid:O75446 OMA:KIDSGVH OrthoDB:EOG48PMMK
PhylomeDB:O75446 EvolutionaryTrace:O75446 GenomeRNAi:8819
NextBio:33082 Bgee:O75446 CleanEx:HS_SAP30 Genevestigator:O75446
GermOnline:ENSG00000164105 Uniprot:O75446
Length = 220
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 63/109 (57%), Positives = 81/109 (74%)
Query: 3 ARHIYICEYHKCLIQSVRNKRRRKXXXXXXXXX----XXXPDVDLFQLQVNTLRRYKKYF 58
ARH+YIC+YHK LIQSVRN+R+RK P+VDL+QLQVNTLRRYK++F
Sbjct: 106 ARHLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRHF 165
Query: 59 KVTSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQK 107
K+ +RPGLNKAQL E + HF++IPV EKD L++F Y+VK++ NK D K
Sbjct: 166 KLPTRPGLNKAQLVEIVGCHFRSIPVNEKDTLTYFIYSVKNDKNKSDLK 214
>FB|FBgn0030788 [details] [associations]
symbol:Sap30 "SIN3-associated polypeptide 30" species:7227
"Drosophila melanogaster" [GO:0003714 "transcription corepressor
activity" evidence=ISS] InterPro:IPR025718 Pfam:PF13867
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 EMBL:AE014298
GO:GO:0006351 GO:GO:0010389 GO:GO:0000118 EMBL:AY071452
RefSeq:NP_573162.1 UniGene:Dm.5131 ProteinModelPortal:Q9VXB3
SMR:Q9VXB3 IntAct:Q9VXB3 MINT:MINT-822576 STRING:Q9VXB3
PaxDb:Q9VXB3 PRIDE:Q9VXB3 EnsemblMetazoa:FBtr0074331 GeneID:32664
KEGG:dme:Dmel_CG4756 UCSC:CG4756-RA CTD:8819 FlyBase:FBgn0030788
eggNOG:NOG81414 GeneTree:ENSGT00390000006633 InParanoid:Q9VXB3
OMA:LTYFIYM OrthoDB:EOG4XSJ66 PhylomeDB:Q9VXB3 ChiTaRS:Sap30
GenomeRNAi:32664 NextBio:779727 Bgee:Q9VXB3 InterPro:IPR024145
InterPro:IPR025717 PANTHER:PTHR13286 Pfam:PF13866 Uniprot:Q9VXB3
Length = 173
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 63/115 (54%), Positives = 83/115 (72%)
Query: 3 ARHIYICEYHKCLIQSVRNKRRRKXXXXXXXXXXXXPDV--DLFQLQVNTLRRYKKYFKV 60
A+HIYIC++HK IQSVR KRRRK DL+QL V+TLRRYK++FKV
Sbjct: 59 AQHIYICDHHKERIQSVRTKRRRKDSEDDSNETDTDLHEFPDLYQLGVSTLRRYKRHFKV 118
Query: 61 TSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQKNGNTGENT 115
+R G+ +AQLA+T++KHFKTIP+ EK++++FF Y VK +NKLDQKNG G +T
Sbjct: 119 QTRQGMKRAQLADTIMKHFKTIPIKEKEIITFFVYMVKMGSNKLDQKNG-LGNDT 172
>MGI|MGI:1929129 [details] [associations]
symbol:Sap30 "sin3 associated polypeptide" species:10090
"Mus musculus" [GO:0000118 "histone deacetylase complex"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0016580 "Sin3
complex" evidence=ISA] [GO:0035914 "skeletal muscle cell
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR025718 Pfam:PF13867 EMBL:AF075136
MGI:MGI:1929129 GO:GO:0003714 GO:GO:0046872 GO:GO:0003677
GO:GO:0006351 GO:GO:0000122 GO:GO:0035914 EMBL:CH466569
GO:GO:0016580 CTD:8819 eggNOG:NOG81414 GeneTree:ENSGT00390000006633
InterPro:IPR024145 InterPro:IPR025717 PANTHER:PTHR13286
Pfam:PF13866 HOGENOM:HOG000007811 HOVERGEN:HBG057907 OMA:KIDSGVH
OrthoDB:EOG48PMMK EMBL:AK010928 EMBL:AK088745 EMBL:BC132081
EMBL:BC132087 EMBL:AJ251216 IPI:IPI00132028 RefSeq:NP_068560.1
UniGene:Mm.118 PDB:2LD7 PDBsum:2LD7 ProteinModelPortal:O88574
SMR:O88574 IntAct:O88574 MINT:MINT-4968448 STRING:O88574
PhosphoSite:O88574 PRIDE:O88574 Ensembl:ENSMUST00000034022
GeneID:60406 KEGG:mmu:60406 UCSC:uc009lsu.2 InParanoid:A2RSE9
EvolutionaryTrace:O88574 NextBio:314849 Bgee:O88574
Genevestigator:O88574 GermOnline:ENSMUSG00000031609 Uniprot:O88574
Length = 220
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 63/109 (57%), Positives = 80/109 (73%)
Query: 3 ARHIYICEYHKCLIQSVRNKRRRKXXXXXXXXX----XXXPDVDLFQLQVNTLRRYKKYF 58
ARH+YIC+YHK LIQSVRN+R+RK P+VDL+QLQVNTLRRYK++F
Sbjct: 106 ARHLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRHF 165
Query: 59 KVTSRPGLNKAQLAETLLKHFKTIPVVEKDVLSFFFYTVKSNTNKLDQK 107
K+ +RPGLNKAQL E + HFK+IPV EKD L+ F Y+V+++ NK D K
Sbjct: 166 KLPTRPGLNKAQLVEIVGCHFKSIPVNEKDTLTCFIYSVRNDKNKSDLK 214
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 115 103 0.00091 102 3 11 22 0.38 30
29 0.49 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 522 (56 KB)
Total size of DFA: 107 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:05
No. of threads or processors used: 24
Search cpu time: 10.58u 0.07s 10.65t Elapsed: 00:00:07
Total cpu time: 10.58u 0.07s 10.65t Elapsed: 00:00:12
Start: Thu Aug 15 11:12:29 2013 End: Thu Aug 15 11:12:41 2013