BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3275
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17704|RS17_DROME 40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2
SV=2
Length = 131
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/52 (90%), Positives = 52/52 (100%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA++VIIEKYYT+LTLDFHTNKRICEE+AIIPTKPLRNKIAG
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAG 52
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
M RLRHSQVRGISIKLQEEERERRDNYVP VSALEQD+IEVD++TK+ML++L
Sbjct: 58 MGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLL 109
>sp|Q962R2|RS17_SPOFR 40S ribosomal protein S17 OS=Spodoptera frugiperda GN=RpS17 PE=2
SV=3
Length = 133
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+++IIEKYYT+LTLDF TNKRICEEIAIIPTKPLRNKIAG
Sbjct: 1 MGRVRTKTVKKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAG 52
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 50/52 (96%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
M+RLRHSQVRGISIKLQEEERERRDNYVPEVSALE D+IEVD +TKDML+ML
Sbjct: 58 MRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKML 109
>sp|Q9U9L1|RS17_ANOGA 40S ribosomal protein S17 OS=Anopheles gambiae GN=RpS17 PE=2 SV=3
Length = 131
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 50/52 (96%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKRLRHSQVRGISIKLQEEERERRDNYVP+VSALEQD+IEVD ETK+ML+ L
Sbjct: 58 MKRLRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHL 109
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKT+KKAS+VIIEKYYT+LT+DF TNKRI EE+AIIPTKPLRNKIAG
Sbjct: 1 MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAG 52
>sp|Q7ZUB2|RS17_COTJA 40S ribosomal protein S17 OS=Coturnix coturnix japonica GN=RPS17
PE=2 SV=3
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|P08636|RS17_CHICK 40S ribosomal protein S17 OS=Gallus gallus GN=RPS17 PE=2 SV=3
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|Q6QAP7|RS17_PIG 40S ribosomal protein S17 OS=Sus scrofa GN=RPS17 PE=2 SV=3
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|P63276|RS17_MOUSE 40S ribosomal protein S17 OS=Mus musculus GN=Rps17 PE=1 SV=2
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|P63275|RS17_FELCA 40S ribosomal protein S17 OS=Felis catus GN=RPS17 PE=2 SV=2
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|P63274|RS17_CRIGR 40S ribosomal protein S17 OS=Cricetulus griseus GN=RPS17 PE=2 SV=2
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|P63273|RS17_CANFA 40S ribosomal protein S17 OS=Canis familiaris GN=RPS17 PE=2 SV=2
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|A5PK63|RS17_BOVIN 40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLDNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|Q90YQ6|RS17_ICTPU 40S ribosomal protein S17 OS=Ictalurus punctatus GN=rps17 PE=2 SV=3
Length = 134
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|P04644|RS17_RAT 40S ribosomal protein S17 OS=Rattus norvegicus GN=Rps17 PE=1 SV=3
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|P08708|RS17_HUMAN 40S ribosomal protein S17 OS=Homo sapiens GN=RPS17 PE=1 SV=2
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|P0CW22|RS17L_HUMAN 40S ribosomal protein S17-like OS=Homo sapiens GN=RPS17L PE=3 SV=1
Length = 135
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKKA+RVIIEKYYT+L DFHTNKR+CEEIAIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAG 52
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
MKR++ VRGISIKLQEEERERRDNYVPEVSAL+Q++IEVD +TK+ML++L
Sbjct: 58 MKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLL 109
>sp|O01692|RS17_CAEEL 40S ribosomal protein S17 OS=Caenorhabditis elegans GN=rps-17 PE=3
SV=2
Length = 130
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 48/52 (92%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+ RVRTKTVKKASRV+IEKYYT++T DFH NKR+C+E+AII +KPLRNKIAG
Sbjct: 1 MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSKPLRNKIAG 52
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 3/56 (5%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQD---VIEVDSETKDMLRMLG 53
M+R+ VRGISIKLQEEERERRDNY+PE+S ++ I+VD++T DML+ G
Sbjct: 58 MRRIERGPVRGISIKLQEEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAG 113
>sp|Q9SQZ1|RS173_ARATH 40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2
SV=3
Length = 140
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKK+SR +IEKYY+++TLDFHTNK+I EE+AIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAG 52
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRMLG 53
MKR++ VRGIS+KLQEEERERR ++VP+ SA++ D ++VD ET +ML LG
Sbjct: 58 MKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLG 110
>sp|Q9SJ36|RS172_ARATH 40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2
SV=3
Length = 140
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKK+SR +IEKYY+++TLDFHTNK+I EE+AIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAG 52
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRMLGRVRTKTV 60
MKR++ VRGIS+KLQEEERERR ++VP+ SA++ D I+VD ET +ML LG T +
Sbjct: 58 MKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGI 117
>sp|P49215|RS17_SOLLC 40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2
SV=3
Length = 144
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKK+SR +IE+YY+K+TLDFHTNK+I EE+AIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAG 52
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRMLG 53
MKR++ VRGIS+KLQEEERERR ++VP+ SA++ D+IEVD ET DML LG
Sbjct: 58 MKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALG 110
>sp|Q9LZ17|RS174_ARATH 40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2
SV=3
Length = 141
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKK+SR +IEKYY+++TLDFHTNK+I EE+AIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAG 52
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRMLG 53
MKR++ VRGIS+KLQEEERERR ++VP+ SA++ D I+VD ET +ML LG
Sbjct: 58 MKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLG 110
>sp|P49205|RS171_ARATH 40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1
SV=3
Length = 141
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 49/52 (94%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKK+SR +IEKYY+++TLDFHTNK+I EE+AIIP+K LRNKIAG
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAG 52
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRMLG 53
MKR++ VRGIS+KLQEEERERR ++VP+ SA++ D I+VD ET +ML LG
Sbjct: 58 MKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLG 110
>sp|P27770|RS17_NEUCR 40S ribosomal protein S17 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rps-17
PE=3 SV=1
Length = 146
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 48/52 (92%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVKK+++VIIE+YY KLTLDF TNKRIC+EIAII +K LRNKIAG
Sbjct: 1 MGRVRTKTVKKSAKVIIERYYPKLTLDFETNKRICDEIAIIASKRLRNKIAG 52
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 44/59 (74%), Gaps = 6/59 (10%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSAL------EQDVIEVDSETKDMLRMLG 53
MKR++ VRGIS KLQEEERER+D YVPEVSAL E ++VD+ETKD+L+ LG
Sbjct: 58 MKRIQRGPVRGISFKLQEEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLG 116
>sp|O42984|RS17A_SCHPO 40S ribosomal protein S17-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps17a PE=3 SV=1
Length = 131
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKT K+ASRV+IEKYY +LTLDF TNKRI +E+AII +K LRNKIAG
Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAG 52
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRMLG 53
MKR++ VRGIS KLQEEERER+D YVPEVS LE D + VD +TKDML+ LG
Sbjct: 58 MKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEVDRVNVDQDTKDMLKSLG 110
>sp|P14127|RS17B_YEAST 40S ribosomal protein S17-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS17B PE=1 SV=1
Length = 136
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVK+AS+ +IE+YY KLTLDF TNKR+C+EIA I +K LRNKIAG
Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAG 52
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 4/57 (7%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALE----QDVIEVDSETKDMLRMLG 53
MKR++ VRGIS KLQEEERER+D YVPEVSAL+ V+ VD++T D+++ LG
Sbjct: 58 MKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLG 114
>sp|P02407|RS17A_YEAST 40S ribosomal protein S17-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS17A PE=1 SV=1
Length = 136
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 46/52 (88%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVK+AS+ +IE+YY KLTLDF TNKR+C+EIA I +K LRNKIAG
Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAG 52
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 43/57 (75%), Gaps = 4/57 (7%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALE----QDVIEVDSETKDMLRMLG 53
MKR++ VRGIS KLQEEERER+D YVPEVSAL+ V+ VD++T D+++ LG
Sbjct: 58 MKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLG 114
>sp|Q9P7J6|RS17B_SCHPO 40S ribosomal protein S17-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps17b PE=1 SV=1
Length = 132
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKT K+ASRV+IEKYY +LTLDF TNKRI +E+AII +K LRNKIAG
Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAG 52
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRMLG 53
MKR++ VRGIS KLQEEERER+D YVPEVS LE+D I VD +TKDML+ LG
Sbjct: 58 MKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDMLKALG 110
>sp|Q4MYY1|RS17_THEPA 40S ribosomal protein S17 OS=Theileria parva GN=RPS17 PE=3 SV=3
Length = 130
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVK+A+R I+EKYY KL LDF NK++ EE+A+IP+K +RNK+AG
Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAG 52
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
M+R++ VRGIS+KLQEEERERR +Y+PE S LE VI+VD +T DML L
Sbjct: 58 MRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFL 109
>sp|Q967G1|RS17_THEAN 40S ribosomal protein S17 OS=Theileria annulata GN=RPS17 PE=2 SV=3
Length = 131
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 45/52 (86%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKTVK+A+R I+EKYY KL LDF NK++ EE+A+IP+K +RNK+AG
Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKKVAEEVALIPSKRMRNKVAG 52
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRML 52
M+R++ VRGIS+KLQEEERERR +Y+PE S LE VI+VD +T DML L
Sbjct: 58 MRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFL 109
>sp|P42520|RS17_DICDI 40S ribosomal protein S17 OS=Dictyostelium discoideum GN=rps17 PE=3
SV=2
Length = 135
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 46/52 (88%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVRTKT+K+AS+++IEK+Y +LT DF TNKR C+++A IP+K LRNKIAG
Sbjct: 1 MGRVRTKTIKRASKLLIEKHYPRLTNDFDTNKRTCDKLAKIPSKRLRNKIAG 52
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 41/50 (82%)
Query: 1 MKRLRHSQVRGISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLR 50
M+R+ + VRGIS KLQEEERE+RDNYVP+ SA++ + +++D + ++ML+
Sbjct: 58 MRRIANGPVRGISYKLQEEEREKRDNYVPQESAIKTNEVKIDRDVEEMLK 107
>sp|Q6LZP7|RS17E_METMP 30S ribosomal protein S17e OS=Methanococcus maripaludis (strain S2
/ LL) GN=rps17e PE=3 SV=1
Length = 63
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GR+R +K+ +IEK+ K T DF NK+ EE+A+I TKPLRN+IAG
Sbjct: 1 MGRIRQTFIKRTGEELIEKFADKFTSDFEENKKAVEEVAMISTKPLRNRIAG 52
>sp|A6UVG8|RS17E_META3 30S ribosomal protein S17e OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rps17e PE=3 SV=1
Length = 63
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAGGLIKR 108
+GR+R +K+A ++EKY +LT DF TNK++ +E+A I TK LRN++AG + K+
Sbjct: 1 MGRIRQTFIKRAGEDLVEKYEDRLTTDFETNKKVIDEVAEIATKRLRNRVAGYVTKK 57
>sp|A9A655|RS17E_METM6 30S ribosomal protein S17e OS=Methanococcus maripaludis (strain C6
/ ATCC BAA-1332) GN=rps17e PE=3 SV=1
Length = 63
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GR+R +K+ +IEK+ K T DF NK+ EE+A+I TK LRN+IAG
Sbjct: 1 MGRIRQTFIKRTGEELIEKFADKFTSDFEENKKAVEEVAMISTKTLRNRIAG 52
>sp|A6VJN0|RS17E_METM7 30S ribosomal protein S17e OS=Methanococcus maripaludis (strain C7
/ ATCC BAA-1331) GN=rps17e PE=3 SV=1
Length = 63
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GR+R +K+ +IEK+ K T DF NK+ EE+A+I TK LRN++AG
Sbjct: 1 MGRIRQTFIKRTGEELIEKFADKFTSDFEENKKAVEEVAMISTKTLRNRVAG 52
>sp|A4FYQ2|RS17E_METM5 30S ribosomal protein S17e OS=Methanococcus maripaludis (strain C5
/ ATCC BAA-1333) GN=rps17e PE=3 SV=1
Length = 63
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GR+R +K+ +IEK+ K T DF NK+ EE+A+I TK LRN++AG
Sbjct: 1 MGRIRQTFIKRTGEELIEKFADKFTSDFEENKKAVEEVAMISTKTLRNRVAG 52
>sp|P54026|RS17E_METJA 30S ribosomal protein S17e OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps17e PE=3 SV=2
Length = 62
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GR+R +K+ + +I+KY T DF TNKR+ EE+A I TK LRN+IAG
Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAG 52
>sp|A6US72|RS17E_METVS 30S ribosomal protein S17e OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rps17e PE=3 SV=1
Length = 63
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GR+R +K+ +IEK+ K T DF NK+ EE+A I TK LRN+IAG
Sbjct: 1 MGRIRQTFIKRTGEELIEKFAGKFTSDFEANKKAVEEVARISTKTLRNRIAG 52
>sp|O26894|RS17E_METTH 30S ribosomal protein S17e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps17e PE=1 SV=1
Length = 62
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+G +RT VK+ ++ +IE + K T DF TNK++ EE + + TK LRNKIAG
Sbjct: 1 MGNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAG 52
>sp|Q8SSF9|RS17_ENCCU 40S ribosomal protein S17 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS17 PE=1 SV=1
Length = 120
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAGGL 105
+G VR K VK+A+R I EKY+ +L F N + +++A++ +K L+N+IAG L
Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYL 54
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 12 ISIKLQEEERERRDNYVPEVSALEQDVIEVDSETKDMLRMLG 53
+ IK EEERER++N +P+ S L+ D +EVD T +M++ G
Sbjct: 69 VYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIKRYG 110
>sp|Q8TUZ3|RS17E_METKA 30S ribosomal protein S17e OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps17e PE=3 SV=1
Length = 70
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+G+VR VK+ +R I+EKY LT DF NK++ E +A TK LRN IAG
Sbjct: 1 MGKVRPTFVKRPAREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAG 52
>sp|A1RTI5|RS17E_PYRIL 30S ribosomal protein S17e OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rps17e PE=3 SV=1
Length = 71
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRV+ K +K +R ++E Y K T F NK+ ++A IP+K +RNK+AG
Sbjct: 1 MGRVKPKYIKSLARRLLETYPDKFTDSFEENKKAVAQLADIPSKTVRNKVAG 52
>sp|Q8ZYF4|RS17E_PYRAE 30S ribosomal protein S17e OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rps17e PE=3 SV=1
Length = 71
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRVR + +K ++E Y K T +F NK+ E+A IP+K +RNK+AG
Sbjct: 1 MGRVRPRYIKSLGEKLLEMYPDKFTDNFEENKKAVAELADIPSKTVRNKVAG 52
>sp|A3DMZ6|RS17E_STAMF 30S ribosomal protein S17e OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rps17e PE=3 SV=1
Length = 68
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+G+VRTK VK+ +R ++EKY T DF NK++ ++ +K LRN+IAG
Sbjct: 1 MGKVRTKIVKRTARELLEKYPNLFTRDFEHNKKVVSKLIETKSKKLRNQIAG 52
>sp|A3MS42|RS17E_PYRCJ 30S ribosomal protein S17e OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rps17e PE=3 SV=1
Length = 71
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+GRV+ K +K + ++E Y + T F NK+ E+A IP+K +RNK+AG
Sbjct: 1 MGRVKPKFIKSLAEKLLEAYPDRFTESFKENKKAVAELADIPSKTVRNKVAG 52
>sp|A4WH03|RS17E_PYRAR 30S ribosomal protein S17e OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rps17e PE=3 SV=1
Length = 71
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAGG---LIKR 108
+GRV+ K +K + ++E Y + T F NK+ E+A IP+K +RNK+AG LIKR
Sbjct: 1 MGRVKPKYIKSLAEKLLETYPDRFTDSFEENKKAVAELAEIPSKTVRNKVAGYITRLIKR 60
>sp|A5ULG0|RS17E_METS3 30S ribosomal protein S17e OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rps17e PE=3 SV=1
Length = 65
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+G +RT VK+ ++ +IE + T DF NK++ E + + TK LRNKIAG
Sbjct: 1 MGNIRTSFVKRLAKELIETHKGVFTTDFDQNKKLVMEYSTVSTKHLRNKIAG 52
>sp|Q2NHW6|RS17E_METST 30S ribosomal protein S17e OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps17e PE=3 SV=1
Length = 60
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+G +RT VK+ ++ ++E + K DF NK++ E + + TK LRN+IAG
Sbjct: 1 MGNIRTTFVKRTAKELLELHGDKFNSDFENNKQVVAEYSTVSTKHLRNQIAG 52
>sp|Q9YA67|RS17E_AERPE 30S ribosomal protein S17e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps17e
PE=3 SV=1
Length = 74
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+G+VR + VK+ +R ++EKY T DF NKR+ ++ +K LRN+IAG
Sbjct: 1 MGKVRIRLVKRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAG 52
>sp|C5A545|RS17E_THEGJ 30S ribosomal protein S17e OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rps17e PE=3 SV=1
Length = 67
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAG 103
+G ++ +K+ +R + ++Y K T DF NKR+ +E+ + +K +RN+IAG
Sbjct: 1 MGNIKQAFIKRTARELFDRYPDKFTRDFEHNKRMVQELTNVTSKTIRNRIAG 52
>sp|Q9V0G0|RS17E_PYRAB 30S ribosomal protein S17e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps17e PE=3 SV=1
Length = 67
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAGGLIK 107
+G++R +K+ +R + KY + T DF NK+ EE+ + +K +RN+IAG + K
Sbjct: 1 MGKIRQGFIKRVARELFNKYPNEFTRDFEHNKKKVEELTNVTSKKIRNRIAGYITK 56
>sp|Q8U0U1|RS17E_PYRFU 30S ribosomal protein S17e OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps17e PE=1 SV=1
Length = 67
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%)
Query: 52 LGRVRTKTVKKASRVIIEKYYTKLTLDFHTNKRICEEIAIIPTKPLRNKIAGGLIK 107
+G++R +K+ +R ++ KY + T DF NK+ +E+ + +K +RN+IAG + K
Sbjct: 1 MGKIRQGFIKRVARELVNKYPNEFTTDFEHNKKKVQELTNVTSKKIRNRIAGYVTK 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,201,895
Number of Sequences: 539616
Number of extensions: 1277935
Number of successful extensions: 5172
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 5039
Number of HSP's gapped (non-prelim): 161
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)